BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17835
(702 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2I75|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase N4
(Ptpn4)
Length = 320
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 146/207 (70%), Gaps = 6/207 (2%)
Query: 496 ALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINANTVA 555
++ QF++LYRKKPG++M A +N+ KNRYRDISPYDATRV+L + DYINAN +
Sbjct: 46 TVLTQFDQLYRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVIL--KGNEDYINANYIN 103
Query: 556 MEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG 615
MEIP S I+N+YIA QGPL T DFW M E GS++VVM+TT VERGR KCH+YWP
Sbjct: 104 MEIPSSSIINQYIACQGPLPHTCTDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPE-- 161
Query: 616 ETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDV 675
T S G + ++C EE + +++FR+ L + + E R +TQ+QY+AWPDHGVPDD
Sbjct: 162 PTGSSSYGCYQVTCHSEEGN--TAYIFRKMTLFNQEKNESRPLTQIQYIAWPDHGVPDDS 219
Query: 676 NRFLAFTRQVRHERAGMVEPAIVHCSA 702
+ FL F VR++RAG EP +VHCSA
Sbjct: 220 SDFLDFVCHVRNKRAGKEEPVVVHCSA 246
>pdb|2B49|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase, Non-Receptor Type 3
Length = 287
Score = 215 bits (548), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 143/207 (69%), Gaps = 7/207 (3%)
Query: 496 ALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINANTVA 555
++ QFE+LYRKKPGL++ A +N+ KNRY+D+ PYD TRV+L + DYINA+ V
Sbjct: 19 TVLIQFEQLYRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQG--NEDYINASYVN 76
Query: 556 MEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG 615
MEIP + +VN+YIATQGPL T FW ++ + +L+VM+TTL ERGRTKCH+YWP
Sbjct: 77 MEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGRTKCHQYWPDPP 136
Query: 616 ETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDV 675
+ ++ G F+I C E D + ++V RE ++ ++QTGE+ VT +QY+AWPDHGVPDD
Sbjct: 137 DV--MNHGGFHIQCQSE--DCTIAYVSREMLVTNTQTGEEHTVTHLQYVAWPDHGVPDDS 192
Query: 676 NRFLAFTRQVRHERAGMVEPAIVHCSA 702
+ FL F VR R EP +VHCSA
Sbjct: 193 SDFLEFVNYVRSLRVD-SEPVLVHCSA 218
>pdb|1GG3|A Chain A, Crystal Structure Of The Protein 4.1r Membrane Binding
Domain
pdb|1GG3|B Chain B, Crystal Structure Of The Protein 4.1r Membrane Binding
Domain
pdb|1GG3|C Chain C, Crystal Structure Of The Protein 4.1r Membrane Binding
Domain
Length = 279
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 145/234 (61%), Gaps = 26/234 (11%)
Query: 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
NF F VKFY DP++L E+ TRY+ LQ+R+DI+A RL + +T LL SYT+Q
Sbjct: 72 NFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQ------ 125
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLH 121
+ELGDY P+ H Y+S L P QT+E+E K+ ELHK +
Sbjct: 126 --------------------SELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSY 165
Query: 122 KGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAGARLNLLSW 181
+ +PA A+ +LE+AK+ MYGV +H AKD + DI LGV ++GL+++ R+N W
Sbjct: 166 RSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPW 225
Query: 182 VKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFR 235
K++KIS+KR FF++++ E Y++ +GF + +YR+ K LWK CVEHHTFFR
Sbjct: 226 PKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFR 279
>pdb|3QIJ|A Chain A, Primitive-Monoclinic Crystal Structure Of The Ferm Domain
Of Protein 4.1r
pdb|3QIJ|B Chain B, Primitive-Monoclinic Crystal Structure Of The Ferm Domain
Of Protein 4.1r
Length = 296
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 145/234 (61%), Gaps = 26/234 (11%)
Query: 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
NF F VKFY DP++L E+ TRY+ LQ+R+DI+A RL + +T LL SYT+Q
Sbjct: 89 NFTFNVKFYPPDPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQ------ 142
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLH 121
+ELGDY P+ H Y+S L P QT+E+E K+ ELHK +
Sbjct: 143 --------------------SELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSY 182
Query: 122 KGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAGARLNLLSW 181
+ +PA A+ +LE+AK+ MYGV +H AKD + DI LGV ++GL+++ R+N W
Sbjct: 183 RSMTPAQADLEFLENAKKLSMYGVDLHKAKDLEGVDIILGVCSSGLLVYKDKLRINRFPW 242
Query: 182 VKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFR 235
K++KIS+KR FF++++ E Y++ +GF + +YR+ K LWK CVEHHTFFR
Sbjct: 243 PKVLKISYKRSSFFIKIRPGEQEQYESTIGFKLPSYRAAKKLWKVCVEHHTFFR 296
>pdb|3BIN|A Chain A, Structure Of The Dal-1 And Tslc1 (372-383) Complex
Length = 283
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 146/235 (62%), Gaps = 26/235 (11%)
Query: 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
+F F VKFY DP++L E+ TRY+ LQ+R DI++ RL + T LL SYTVQ
Sbjct: 74 HFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQ------ 127
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLH 121
+ELGDY PDE Y+S P T+E+E K+ ELHK H
Sbjct: 128 --------------------SELGDYDPDECGSDYISEFRFAPNHTKELEDKVIELHKSH 167
Query: 122 KGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAGARLNLLSW 181
+G +PA+AE ++LE+AK+ MYGV +H AKDS+ +I LGV A+GL+I+ R+N +W
Sbjct: 168 RGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAW 227
Query: 182 VKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFRL 236
K++KIS+KR F+++++ E +++ +GF + +R+ K LWK CVEHHTFFRL
Sbjct: 228 PKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRL 282
>pdb|2HE7|A Chain A, Ferm Domain Of Epb41l3 (Dal-1)
Length = 283
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/235 (43%), Positives = 146/235 (62%), Gaps = 26/235 (11%)
Query: 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
+F F VKFY DP++L E+ TRY+ LQ+R DI++ RL + T LL SYTVQ
Sbjct: 74 HFSFNVKFYPPDPAQLSEDITRYYLCLQLRDDIVSGRLPCSFVTLALLGSYTVQ------ 127
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLH 121
+ELGDY PDE Y+S P T+E+E K+ ELHK H
Sbjct: 128 --------------------SELGDYDPDECGSDYISEFRFAPNHTKELEDKVIELHKSH 167
Query: 122 KGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAGARLNLLSW 181
+G +PA+AE ++LE+AK+ MYGV +H AKDS+ +I LGV A+GL+I+ R+N +W
Sbjct: 168 RGMTPAEAEMHFLENAKKLSMYGVDLHHAKDSEGVEIMLGVCASGLLIYRDRLRINRFAW 227
Query: 182 VKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFRL 236
K++KIS+KR F+++++ E +++ +GF + +R+ K LWK CVEHHTFFRL
Sbjct: 228 PKVLKISYKRNNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRL 282
>pdb|2C7S|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Kappa At 1.95a Resolution
Length = 313
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 103/190 (54%), Gaps = 13/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRVVLH---EAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A K +N KNRY +I YD +RV+L + P DYINAN I G + YIATQG
Sbjct: 64 AKKDQNRAKNRYGNIIAYDHSRVILQPVEDDPSSDYINANY----IDGYQRPSHYIATQG 119
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
P+ TV DFW M+ + S +VMVT LVE GR KC+KYWP E G F ++C
Sbjct: 120 PVHETVYDFWRMIWQEQSACIVMVTNLVEVGRVKCYKYWPDDTEVY----GDFKVTCV-- 173
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
E +P +V R F L E R+V Q + WPDHGVP L+F R+V+
Sbjct: 174 EMEPLAEYVVRTFTLERRGYNEIREVKQFHFTGWPDHGVPYHATGLLSFIRRVKLSNPPS 233
Query: 693 VEPAIVHCSA 702
P +VHCSA
Sbjct: 234 AGPIVVHCSA 243
>pdb|1WCH|A Chain A, Crystal Structure Of Ptpl1 Human Tyrosine Phosphatase
Mutated In Colorectal Cancer - Evidence For A Second
Phosphotyrosine Substrate Recognition Pocket
Length = 315
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 111/204 (54%), Gaps = 10/204 (4%)
Query: 500 QFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINANTVAMEIP 559
+ E L KP L +EN KNRY++I PYDATRV L + +G YINA+ + + +
Sbjct: 54 ELENLQELKPLDQCLIGQTKENRRKNRYKNILPYDATRVPLGD--EGGYINASFIKIPVG 111
Query: 560 GSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLE 619
V YIA QGPL +TVGDFW M+ E ST++ M+T VE + KC +YWP++
Sbjct: 112 KEEFV--YIACQGPLPTTVGDFWQMIWEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTT 169
Query: 620 LSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFL 679
+ R ++ + + FV R L D QT E R ++ + + AWPDH P + L
Sbjct: 170 MVSNRLRLALVRMQQ--LKGFVVRAMTLEDIQTREVRHISHLNFTAWPDHDTPSQPDDLL 227
Query: 680 AFTRQVRH-ERAGMVEPAIVHCSA 702
F +RH R+G P I HCSA
Sbjct: 228 TFISYMRHIHRSG---PIITHCSA 248
>pdb|2SHP|A Chain A, Tyrosine Phosphatase Shp-2
pdb|2SHP|B Chain B, Tyrosine Phosphatase Shp-2
Length = 525
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 117/216 (54%), Gaps = 17/216 (7%)
Query: 500 QFERLYRKKPGL--SMLHANKQENVIKNRYRDISPYDATRVVLHEA----PDGDYINANT 553
+FE L +++ L S +QEN KNRY++I P+D TRVVLH+ P DYINAN
Sbjct: 250 EFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANI 309
Query: 554 VAMEIP----GSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHK 609
+ E S YIATQG L +TV DFW M+ + S ++VM T VERG++KC K
Sbjct: 310 IMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVK 369
Query: 610 YWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVL-RDSQTGEKRDVTQMQYLAWPD 668
YWP E G + KE A + + RE L + Q +R V Q + WPD
Sbjct: 370 YWPDEYALKEY--GVMRVRNVKESA--AHDYTLRELKLSKVGQGNTERTVWQYHFRTWPD 425
Query: 669 HGVPDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
HGVP D L F +V H++ +++ P +VHCSA
Sbjct: 426 HGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSA 461
>pdb|3B7O|A Chain A, Crystal Structure Of The Human Tyrosine Phosphatase Shp2
(Ptpn11) With An Accessible Active Site
Length = 316
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 117/216 (54%), Gaps = 17/216 (7%)
Query: 500 QFERLYRKKPGL--SMLHANKQENVIKNRYRDISPYDATRVVLHEA----PDGDYINANT 553
+FE L +++ L S +QEN KNRY++I P+D TRVVLH+ P DYINAN
Sbjct: 37 EFETLQQQECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANI 96
Query: 554 VAMEIP----GSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHK 609
+ E S YIATQG L +TV DFW M+ + S ++VM T VERG++KC K
Sbjct: 97 IMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVK 156
Query: 610 YWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVL-RDSQTGEKRDVTQMQYLAWPD 668
YWP E G + KE A + + RE L + Q +R V Q + WPD
Sbjct: 157 YWPDEYALKEY--GVMRVRNVKESA--AHDYTLRELKLSKVGQGNTERTVWQYHFRTWPD 212
Query: 669 HGVPDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
HGVP D L F +V H++ +++ P +VHCSA
Sbjct: 213 HGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCSA 248
>pdb|3O5X|A Chain A, Crystal Structure Of The Oncogenic Tyrosine Phosphatase
Shp2 Complexed With A Salicylic Acid-Based Small
Molecule Inhibitor
pdb|3MOW|A Chain A, Crystal Structure Of Shp2 In Complex With A Tautomycetin
Analog Ttn D- 1
Length = 276
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 113/210 (53%), Gaps = 21/210 (10%)
Query: 504 LYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEA----PDGDYINANTVAMEIP 559
LY +K G +QEN KNRY++I P+D TRVVLH+ P DYINAN + E
Sbjct: 2 LYSRKEG------QRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFE 55
Query: 560 ----GSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG 615
S YIATQG L +TV DFW M+ + S ++VM T VERG++KC KYWP
Sbjct: 56 TKCNNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPDEY 115
Query: 616 ETLELSGGRFNISCAKEEADPSGSFVFREFVL-RDSQTGEKRDVTQMQYLAWPDHGVPDD 674
E G + KE A + + RE L + Q +R V Q + WPDHGVP D
Sbjct: 116 ALKEY--GVMRVRNVKESA--AHDYTLRELKLSKVGQGNTERTVWQYHFRTWPDHGVPSD 171
Query: 675 VNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
L F +V H++ +++ P +VHCSA
Sbjct: 172 PGGVLDFLEEVHHKQESIMDAGPVVVHCSA 201
>pdb|2NV5|A Chain A, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|B Chain B, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
pdb|2NV5|C Chain C, Crystal Structure Of A C-Terminal Phosphatase Domain Of
Rattus Norvegicus Ortholog Of Human Protein Tyrosine
Phosphatase, Receptor Type, D (Ptprd)
Length = 299
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 515 HANKQENVIKNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQ 571
H+N + N KNRY ++ YD +RV+L P DY+NAN I G N YIATQ
Sbjct: 46 HSNLEVNKPKNRYANVIAYDHSRVLLSAIEGIPGSDYVNANY----IDGYRKQNAYIATQ 101
Query: 572 GPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG-ETLELSGGRFNISCA 630
G L T GDFW M+ E S VVM+T L ER R KC +YWPS G ET L +
Sbjct: 102 GSLPETFGDFWRMIWEQRSATVVMMTKLEERSRVKCDQYWPSRGTETHGL------VQVT 155
Query: 631 KEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA 690
+ ++ R F L + + EKR+V Q Q+ AWPDHGVP+ FLAF R+V+
Sbjct: 156 LLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAWPDHGVPEHPTPFLAFLRRVKTCNP 215
Query: 691 GMVEPAIVHCSA 702
P +VHCSA
Sbjct: 216 PDAGPMVVHCSA 227
>pdb|1LAR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
pdb|1LAR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Lar
Length = 575
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 107/192 (55%), Gaps = 14/192 (7%)
Query: 515 HANKQENVIKNRYRDISPYDATRVVLHE---APDGDYINANTVAMEIPGSGIVNRYIATQ 571
++N + N KNRY ++ YD +RV+L P DYINAN I G N YIATQ
Sbjct: 37 NSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANY----IDGYRKQNAYIATQ 92
Query: 572 GPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG-ETLELSGGRFNISCA 630
GPL T+GDFW M+ E + VVM+T L E+ R KC +YWP+ G ET L I
Sbjct: 93 GPLPETMGDFWRMVWEQRTATVVMMTRLEEKSRVKCDQYWPARGTETCGL------IQVT 146
Query: 631 KEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA 690
+ ++ R F L S + EKR++ Q Q++AWPDHGVP+ LAF R+V+
Sbjct: 147 LLDTVELATYTVRTFALHKSGSSEKRELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNP 206
Query: 691 GMVEPAIVHCSA 702
P +VHCSA
Sbjct: 207 LDAGPMVVHCSA 218
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 109/214 (50%), Gaps = 17/214 (7%)
Query: 496 ALVAQFERLYRKKPGLS-MLHANKQENVIKNRYRDISPYDATRVVLHE---APDGDYINA 551
A+ +F+ L K S + AN N KNR +I PY+ TRV L DYINA
Sbjct: 306 AMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRGVEGSDYINA 365
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + G YIATQGPLA + DFW ML E ST++VM+T L E GR KCH+YW
Sbjct: 366 SF----LDGYRQQKAYIATQGPLAESTEDFWRMLWEHNSTIIVMLTKLREMGREKCHQYW 421
Query: 612 PSLGETLELSGGRFNISCAKEEADPSG-SFVFREFVLRDSQTGEKRDVTQMQYLAWPDHG 670
P+ R+ A+ + ++ REF + D++ G+ R + Q Q+ WP+ G
Sbjct: 422 PA------ERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQG 475
Query: 671 VPDDVNRFLAFTRQVR--HERAGMVEPAIVHCSA 702
VP F+ F QV E+ G P VHCSA
Sbjct: 476 VPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSA 509
>pdb|2FH7|A Chain A, Crystal Structure Of The Phosphatase Domains Of Human Ptp
Sigma
Length = 595
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 106/192 (55%), Gaps = 14/192 (7%)
Query: 515 HANKQENVIKNRYRDISPYDATRVVLH--EAPDG-DYINANTVAMEIPGSGIVNRYIATQ 571
H+N + N KNRY ++ YD +RV+L E G DYINAN V G N YIATQ
Sbjct: 49 HSNLEVNKPKNRYANVIAYDHSRVILQPIEGIMGSDYINANYV----DGYRRQNAYIATQ 104
Query: 572 GPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG-ETLELSGGRFNISCA 630
GPL T GDFW M+ E S +VM+T L E+ R KC +YWP+ G ET I
Sbjct: 105 GPLPETFGDFWRMVWEQRSATIVMMTRLEEKSRIKCDQYWPNRGTETYGF------IQVT 158
Query: 631 KEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA 690
+ +F R F L + + EKR+V Q Q+ AWPDHGVP+ FLAF R+V+
Sbjct: 159 LLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFLRRVKTCNP 218
Query: 691 GMVEPAIVHCSA 702
P +VHCSA
Sbjct: 219 PDAGPIVVHCSA 230
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 109/210 (51%), Gaps = 17/210 (8%)
Query: 500 QFERLYRKKPGLS-MLHANKQENVIKNRYRDISPYDATRVVLHE---APDGDYINANTVA 555
+F+RL K S + AN N KNR +I PY++TRV L DYINA+
Sbjct: 322 EFKRLANSKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCLQPIRGVEGSDYINASF-- 379
Query: 556 MEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG 615
I G YIATQGPLA T DFW ML E ST+VVM+T L E GR KCH+YWP+
Sbjct: 380 --IDGYRQQKAYIATQGPLAETTEDFWRMLWENNSTIVVMLTKLREMGREKCHQYWPA-- 435
Query: 616 ETLELSGGRFNISCAKEEADPSG-SFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDD 674
R+ A+ + ++ REF + D++ G+ R V Q Q+ WP+ GVP
Sbjct: 436 ----ERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKS 491
Query: 675 VNRFLAFTRQVR--HERAGMVEPAIVHCSA 702
F+ F QV E+ G P VHCSA
Sbjct: 492 GEGFIDFIGQVHKTKEQFGQDGPISVHCSA 521
>pdb|2PI7|A Chain A, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
pdb|2PI7|B Chain B, Structure Of The Catalytic Domain Of The Chick Retinal
Neurite Inhibitor-Receptor Protein Tyrosine Phosphatase
Cryp-2CPTPRO
Length = 312
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 120/246 (48%), Gaps = 24/246 (9%)
Query: 469 SRGGLNARQCRGPVPVDAPVG-----GWTGEWALVAQFERLYRKKPGLSMLH--ANKQEN 521
S+ GL R+ PV +D G ++ QFE L K GL + H A+ N
Sbjct: 1 SKNGLKKRKLTNPVQLDDFDGYIKDMAKDSDYKFSLQFEEL--KLIGLDIPHFAADLPMN 58
Query: 522 VIKNRYRDISPYDATRVVL---HEAPDGDYINANTVAMEIPGSGIVNRYIATQGPLASTV 578
KNRY +I PYD +RV L +E DYINAN IPG YIATQGPL T
Sbjct: 59 RCKNRYTNILPYDFSRVRLVSMNEEEGSDYINANY----IPGYNSPQEYIATQGPLPETR 114
Query: 579 GDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSG 638
DFW M+++ S ++VM+T E+ R KC YWP + + + +E D
Sbjct: 115 NDFWKMVLQQKSQIIVMLTQCNEKRRVKCDHYWPFTEDPIAYGDITVEMLSEEEHTD--- 171
Query: 639 SFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVP--DDVNRFLAFTRQVRHERAGMVEPA 696
+V+R F R S E +DV Y AWPDHGVP + L F + VR + P
Sbjct: 172 -WVYRNF--RISYADEVQDVMHFNYTAWPDHGVPTANAAESILQFVQMVRQKSVKSKGPM 228
Query: 697 IVHCSA 702
I+HCSA
Sbjct: 229 IIHCSA 234
>pdb|3SR9|A Chain A, Crystal Structure Of Mouse Ptpsigma
Length = 583
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 105/192 (54%), Gaps = 14/192 (7%)
Query: 515 HANKQENVIKNRYRDISPYDATRVVLH--EAPDG-DYINANTVAMEIPGSGIVNRYIATQ 571
H+N + N KNRY ++ YD +RV+L E G DYINAN V G N YIATQ
Sbjct: 51 HSNLEANKPKNRYANVIAYDHSRVILQPLEGIMGSDYINANYV----DGYRRQNAYIATQ 106
Query: 572 GPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG-ETLELSGGRFNISCA 630
GPL T GDFW M+ E S VVM+T L E+ R KC +YWP+ G ET I
Sbjct: 107 GPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRIKCDQYWPNRGTETYGF------IQVT 160
Query: 631 KEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA 690
+ +F R F L + + EKR+V Q+ AWPDHGVP+ FLAF R+V+
Sbjct: 161 LLDTMELATFCVRTFSLHKNGSSEKREVRHFQFTAWPDHGVPEYPTPFLAFLRRVKTCNP 220
Query: 691 GMVEPAIVHCSA 702
P +VHCSA
Sbjct: 221 PDAGPIVVHCSA 232
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 107/210 (50%), Gaps = 17/210 (8%)
Query: 500 QFERLYRKKPGLS-MLHANKQENVIKNRYRDISPYDATRVVLHE---APDGDYINANTVA 555
+F+RL K S + A+ N KNR +I PY+++RV L DYINA+
Sbjct: 324 EFKRLASSKAHTSRFITASLPCNKFKNRLVNILPYESSRVCLQPIRGVEGSDYINASF-- 381
Query: 556 MEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG 615
I G YIATQGPLA T DFW L E ST+VVM+T L E GR KCH+YWP+
Sbjct: 382 --IDGYRQQKAYIATQGPLAETTEDFWRALWENNSTIVVMLTKLREMGREKCHQYWPA-- 437
Query: 616 ETLELSGGRFNISCAKEEADPSG-SFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDD 674
R+ A+ + ++ REF + D++ G+ R V Q Q+ WP+ G P
Sbjct: 438 ----ERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGAPKS 493
Query: 675 VNRFLAFTRQVR--HERAGMVEPAIVHCSA 702
F+ F QV E+ G P VHCSA
Sbjct: 494 GEGFIDFIGQVHKTKEQFGQDGPISVHCSA 523
>pdb|1RPM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
pdb|1RPM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Mu, Domain 1
Length = 278
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 96/190 (50%), Gaps = 13/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQG 572
A K EN +KNRY +I YD +RV L + DYIN N I G N YIATQG
Sbjct: 40 AKKDENRMKNRYGNIIAYDHSRVRLQTIEGDTNSDYINGNY----IDGYHRPNHYIATQG 95
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
P+ T+ DFW M+ + ++MVT LVE GR KC KYWP E + +I
Sbjct: 96 PMQETIYDFWRMVWHENTASIIMVTNLVEVGRVKCCKYWPDDTEIYK------DIKVTLI 149
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
E + +V R F + E R++ Q + WPDHGVP L F RQV+ +
Sbjct: 150 ETELLAEYVIRTFAVEKRGVHEIREIRQFHFTGWPDHGVPYHATGLLGFVRQVKSKSPPS 209
Query: 693 VEPAIVHCSA 702
P +VHCSA
Sbjct: 210 AGPLVVHCSA 219
>pdb|2QEP|A Chain A, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
pdb|2QEP|B Chain B, Crystal Structure Of The D1 Domain Of Ptprn2 (Ia2beta)
Length = 304
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/216 (39%), Positives = 114/216 (52%), Gaps = 25/216 (11%)
Query: 494 EW-ALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVL---HEAPDGDYI 549
EW AL A Y+ +P S + A ++ENV KNR + YD +RV+L + DYI
Sbjct: 35 EWEALCA-----YQAEPNSSFV-AQREENVPKNRSLAVLTYDHSRVLLKAENSHSHSDYI 88
Query: 550 NANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHK 609
NA+ + P + YIATQGPL +TV DFW M+ E+G ++VM+T L E G +C+
Sbjct: 89 NASPIMDHDPRNPA---YIATQGPLPATVADFWQMVWESGCVVIVMLTPLAENGVRQCYH 145
Query: 610 YWPSLGETL----ELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLA 665
YWP G L E++ +I C F+ R F L++ QT E R VTQ +L+
Sbjct: 146 YWPDEGSNLYHIYEVNLVSEHIWCE--------DFLVRSFYLKNLQTNETRTVTQFHFLS 197
Query: 666 WPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCS 701
W D GVP L F R+V G P IVHCS
Sbjct: 198 WYDRGVPSSSRSLLDFRRKVNKCYRGRSCPIIVHCS 233
>pdb|2OOQ|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptprt
pdb|2OOQ|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptprt
Length = 286
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 100/190 (52%), Gaps = 13/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRV---VLHEAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A + EN KNRY +I YD +RV VL P DYINAN I G YIATQG
Sbjct: 42 AKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANY----IDGYHRPRHYIATQG 97
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
P+ TV DFW M+ + S +VMVT LVE GR KC +YWP + E+ G +I
Sbjct: 98 PMQETVKDFWRMIWQENSASIVMVTNLVEVGRVKCVRYWP---DDTEVYG---DIKVTLI 151
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
E +P +V R F ++ E R++ + +WPDHGVP L F RQV+
Sbjct: 152 ETEPLAEYVIRTFTVQKKGYHEIRELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPE 211
Query: 693 VEPAIVHCSA 702
P +VHCSA
Sbjct: 212 AGPIVVHCSA 221
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 25 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 81
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 82 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSVKCAQYW 137
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 138 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 197 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 229
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 12 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 68
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 69 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 124
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 125 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 183
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 184 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 216
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 19 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 75
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 76 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 131
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 132 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 190
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 191 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 223
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 19 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 75
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 76 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 131
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 132 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 190
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 191 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 223
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 15 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 71
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 72 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 127
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 128 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 186
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 187 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 219
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 25 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 81
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 82 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 137
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 138 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 197 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 229
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 20 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 76
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 77 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 132
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 133 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 191
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 192 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 224
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 17 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 73
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 74 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 129
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 130 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 188
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 189 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 221
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 25 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 81
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 82 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 137
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 138 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 197 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 229
>pdb|3QCL|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-(4-Hydroxybut-1-Yn-1-
Yl)benzoic Acid
pdb|3QCN|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Trigonal Crystal Form
Length = 310
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 501 FERLYRKKPGLSML--HANKQENVIKNRYRDISPYDATRVVLHEAP-----DGDYINANT 553
FE + R +++ H+N EN KNRY +I YD +RV L P DYINAN
Sbjct: 34 FEEVQRSTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 93
Query: 554 VAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS 613
V G YIATQGPL ST DFW M+ E + ++VM+T LVE+GR KC +YWP+
Sbjct: 94 V----DGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPT 149
Query: 614 LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQT--GEK---------RDVTQMQ 662
E E G NI + + R F +R+++ G+K R V Q
Sbjct: 150 --ENTEEYG---NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYH 204
Query: 663 YLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
Y WPD GVP+ L F R+ R P +VHCSA
Sbjct: 205 YTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSA 244
>pdb|2I1Y|A Chain A, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
pdb|2I1Y|B Chain B, Crystal Structure Of The Phosphatase Domain Of Human Ptp
Ia-2
Length = 301
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 114/216 (52%), Gaps = 25/216 (11%)
Query: 494 EW-ALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVL--HEAPD-GDYI 549
EW AL A Y+ +P + A + N+ KNR+ D PYD R+ L +P DYI
Sbjct: 34 EWQALCA-----YQAEPN-TCATAQGEGNIKKNRHPDFLPYDHARIKLKVESSPSRSDYI 87
Query: 550 NANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHK 609
NA+ + P + YIATQGPL+ T+ DFW M+ E+G T++VM+T LVE G +C +
Sbjct: 88 NASPIIEHDPR---MPAYIATQGPLSHTIADFWQMVWESGCTVIVMLTPLVEDGVKQCDR 144
Query: 610 YWPSLGETL----ELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLA 665
YWP G +L E++ +I C F+ R F L++ QT E R +TQ +L+
Sbjct: 145 YWPDEGASLYHVYEVNLVSEHIWCE--------DFLVRSFYLKNVQTQETRTLTQFHFLS 196
Query: 666 WPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCS 701
WP G P L F R+V G P IVHCS
Sbjct: 197 WPAEGTPASTRPLLDFRRKVNKCYRGRSCPIIVHCS 232
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 47 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 103
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 104 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 159
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 160 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 218
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 219 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 251
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|2OC3|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Protein
Tyrosine Phosphatase Non-Receptor Type 18
Length = 303
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 112/217 (51%), Gaps = 18/217 (8%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVL---HEAPDGDY 548
GE++ + ++ S + ++ ENV KNRY+D+ PYD TRV+L E DY
Sbjct: 31 AGEFSDIQACSAAWKADGVCSTVAGSRPENVRKNRYKDVLPYDQTRVILSLLQEEGHSDY 90
Query: 549 INANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCH 608
IN N I G YIATQGPL T+ DFW ++ E G +++M +E GR +C
Sbjct: 91 INGNF----IRGVDGSLAYIATQGPLPHTLLDFWRLVWEFGVKVILMACREIENGRKRCE 146
Query: 609 KYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQT---GEKRDVTQMQYLA 665
+YW E L+ G F I+ KE+ ++ + +LR + E R V Q+QY++
Sbjct: 147 RYWAQEQEPLQT--GLFCITLIKEK------WLNEDIMLRTLKVTFQKESRSVYQLQYMS 198
Query: 666 WPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
WPD GVP + LA + R + EP VHCSA
Sbjct: 199 WPDRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSA 235
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 520 ENVIKNRYRDISPYDATRVVLHEAPD---GDYINANTVAMEIPGSGIVNRYIATQGPLAS 576
EN KNRY +I PYDATRV L D DYINA+ IPG+ YI TQGPL
Sbjct: 66 ENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASY----IPGNNFRREYIVTQGPLPG 121
Query: 577 TVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADP 636
T DFW M+ E +VMVT VE+GR KC YWP+ ++L G + E P
Sbjct: 122 TKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYY--GDLILQMLSESVLP 179
Query: 637 SGSFVFREF-VLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMV 693
+ REF + + Q R + Y WPDHGVP+ + F R VR R+
Sbjct: 180 --EWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGA 237
Query: 694 EPAIVHCSA 702
P +VHCSA
Sbjct: 238 GPTVVHCSA 246
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 520 ENVIKNRYRDISPYDATRVVLHEAPD---GDYINANTVAMEIPGSGIVNRYIATQGPLAS 576
EN KNRY +I PYDATRV L D DYINA+ IPG+ YI TQGPL
Sbjct: 50 ENRGKNRYNNILPYDATRVKLSNVDDDPCSDYINASY----IPGNNFRREYIVTQGPLPG 105
Query: 577 TVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADP 636
T DFW M+ E +VMVT VE+GR KC YWP+ ++L G + E P
Sbjct: 106 TKDDFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYY--GDLILQMLSESVLP 163
Query: 637 SGSFVFREF-VLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMV 693
+ REF + + Q R + Y WPDHGVP+ + F R VR R+
Sbjct: 164 --EWTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGA 221
Query: 694 EPAIVHCSA 702
P +VHCSA
Sbjct: 222 GPTVVHCSA 230
>pdb|2H4V|A Chain A, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
pdb|2H4V|B Chain B, Crystal Structure Of The Human Tyrosine Receptor
Phosphatase Gamma
Length = 320
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 501 FERLYRKKPGLSML--HANKQENVIKNRYRDISPYDATRVVLHEAP-----DGDYINANT 553
FE + R +++ H+N EN KNRY +I YD +RV L P DYINAN
Sbjct: 45 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 104
Query: 554 VAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS 613
V G YIATQGPL ST DFW M+ E + ++VM+T LVE+GR KC +YWP+
Sbjct: 105 V----DGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPT 160
Query: 614 LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQT--GEK---------RDVTQMQ 662
E E G NI + + R F +R+++ G+K R V Q
Sbjct: 161 --ENSEEYG---NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYH 215
Query: 663 YLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
Y WPD GVP+ L F R+ R P +VHCSA
Sbjct: 216 YTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSA 255
>pdb|2PBN|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma
Length = 313
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 501 FERLYRKKPGLSML--HANKQENVIKNRYRDISPYDATRVVLHEAP-----DGDYINANT 553
FE + R +++ H+N EN KNRY +I YD +RV L P DYINAN
Sbjct: 35 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 94
Query: 554 VAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS 613
V G YIATQGPL ST DFW M+ E + ++VM+T LVE+GR KC +YWP+
Sbjct: 95 V----DGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPT 150
Query: 614 LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQT--GEK---------RDVTQMQ 662
E E G NI + + R F +R+++ G+K R V Q
Sbjct: 151 --ENSEEYG---NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYH 205
Query: 663 YLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
Y WPD GVP+ L F R+ R P +VHCSA
Sbjct: 206 YTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSA 245
>pdb|3QCB|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCB|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, Apo
pdb|3QCC|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCC|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Orthorhombic Crystal Form
pdb|3QCD|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With Vanadate, Trigonal Crystal Form
pdb|3QCE|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCE|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Soaking
pdb|3QCF|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCF|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]thiophene-2-Carboxylic
Acid Via Co-Crystallization
pdb|3QCG|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3-Bromo-4-Chlorobenzyl)sulfanyl]thiophene-2-
Carboxylic Acid
pdb|3QCH|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
3-[(3,4-Dichlorobenzyl)sulfanyl]-N-(Methylsulfonyl)
Thiophene-2-Carboxamide
pdb|3QCI|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
N-[(3-Aminophenyl)sulfonyl]-3-[(3,4-Dichlorobenzyl)
Sulfanyl]thiophene-2-Carboxamide
pdb|3QCJ|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
5-[({3-[(3,4-Dichlorobenzyl)sulfanyl]thiophen-2-
Yl}carbonyl)sulfamoyl]-2-Methoxybenzoic Acid
pdb|3QCK|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]benzoic Acid
Length = 310
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 501 FERLYRKKPGLSML--HANKQENVIKNRYRDISPYDATRVVLHEAP-----DGDYINANT 553
FE + R +++ H+N EN KNRY +I YD +RV L P DYINAN
Sbjct: 34 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 93
Query: 554 VAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS 613
V G YIATQGPL ST DFW M+ E + ++VM+T LVE+GR KC +YWP+
Sbjct: 94 V----DGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPT 149
Query: 614 LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQT--GEK---------RDVTQMQ 662
E E G NI + + R F +R+++ G+K R V Q
Sbjct: 150 --ENSEEYG---NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYH 204
Query: 663 YLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
Y WPD GVP+ L F R+ R P +VHCSA
Sbjct: 205 YTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSA 244
>pdb|3QCM|A Chain A, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
pdb|3QCM|B Chain B, Human Receptor Protein Tyrosine Phosphatase Gamma, Domain
1, In Complex With
2-[(3,4-Dichlorobenzyl)sulfanyl]-4-{[3-({n-[2-
(Methylamino)ethyl]glycyl}amino)phenyl]ethynyl}benzoic
Acid
Length = 310
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 501 FERLYRKKPGLSML--HANKQENVIKNRYRDISPYDATRVVLHEAP-----DGDYINANT 553
FE + R +++ H+N EN KNRY +I YD +RV L P DYINAN
Sbjct: 34 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 93
Query: 554 VAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS 613
V G YIATQGPL ST DFW M+ E + +++M+T LVE+GR KC +YWP+
Sbjct: 94 V----DGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIIMITNLVEKGRRKCDQYWPT 149
Query: 614 LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQT--GEK---------RDVTQMQ 662
E E G NI + + R F +R+++ G+K R V Q
Sbjct: 150 --ENTEEYG---NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYH 204
Query: 663 YLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
Y WPD GVP+ L F R+ R P +VHCSA
Sbjct: 205 YTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSA 244
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRY D+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPSRVAKLPKNKNRNRYCDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +TVG FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTVGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|2NLK|A Chain A, Crystal Structure Of D1 And D2 Catalytic Domains Of Human
Protein Tyrosine Phosphatase Gamma (D1+d2 Ptprg)
Length = 627
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 109/220 (49%), Gaps = 27/220 (12%)
Query: 501 FERLYRKKPGLSML--HANKQENVIKNRYRDISPYDATRVVLHEAP-----DGDYINANT 553
FE + R +++ H+N EN KNRY +I YD +RV L P DYINAN
Sbjct: 27 FEEVQRCTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANY 86
Query: 554 VAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS 613
V G YIATQGPL ST DFW M+ E + ++VM+T LVE+GR KC +YWP+
Sbjct: 87 V----DGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGIIVMITNLVEKGRRKCDQYWPT 142
Query: 614 LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQT--GEK---------RDVTQMQ 662
E E G NI + + R F +R+++ G+K R V Q
Sbjct: 143 --ENSEEYG---NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYH 197
Query: 663 YLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
Y WPD GVP+ L F R+ R P +VHCSA
Sbjct: 198 YTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSA 237
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 29/224 (12%)
Query: 488 VGGWT---GEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAP 544
VGG T ++ LV Q Y + A K+ N KNR + P + RV L P
Sbjct: 319 VGGKTRLEKQFKLVTQCNAKY-----VECFSAQKECNKEKNRNSSVVPSERARVGLAPLP 373
Query: 545 D---GDYINANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMV---TT 598
DYINA+ + G N +I TQ PL T DFW M+ + + ++VM+ +
Sbjct: 374 GMKGTDYINASYIM----GYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQS 429
Query: 599 LVERGRTKCHKYWPSLGETLELSGGRFNISCAKEE---ADPSGSFVFREFVLRDSQTGEK 655
L E YWPS E++ F ++ ++ + +F+L +Q
Sbjct: 430 LAEDEFV----YWPSREESMNCEA--FTVTLISKDRLCLSNEEQIIIHDFILEATQDDYV 483
Query: 656 RDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVH 699
+V Q WP+ P ++ ++ E P IVH
Sbjct: 484 LEVRHFQCPKWPNPDAP--ISSTFELINVIKEEALTRDGPTIVH 525
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 100/187 (53%), Gaps = 13/187 (6%)
Query: 520 ENVIKNRYRDISPYDATRVVL--HEAPDGDYINANTVAMEIPGSGIVNRYIATQGPLAST 577
EN KNRY ++ PYD +RV L DYINAN +PG +IATQGPL +T
Sbjct: 69 ENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANY----MPGYHSKKDFIATQGPLPNT 124
Query: 578 VGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPS 637
+ DFW M+ E +VM+T VE+GRTKC +YWPS G ++ E P
Sbjct: 125 LKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWPSKQAQ---DYGDITVAMTSEVVLP- 180
Query: 638 GSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM--VEP 695
+ R+FV+++ Q+ E + Q + +WPDHGVPD + + F VR + P
Sbjct: 181 -EWTIRDFVVKNMQSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIPPESP 239
Query: 696 AIVHCSA 702
+VHCSA
Sbjct: 240 ILVHCSA 246
>pdb|2GJT|A Chain A, Crystal Structure Of The Human Receptor Phosphatase Ptpro
pdb|2GJT|B Chain B, Crystal Structure Of The Human Receptor Phosphatase Ptpro
Length = 295
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 493 GEWALVAQFERLYRKKPGLSMLH--ANKQENVIKNRYRDISPYDATRVVL---HEAPDGD 547
++ QFE L K GL + H A+ N KNRY +I PYD +RV L +E D
Sbjct: 21 SDYKFSLQFEEL--KLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEGAD 78
Query: 548 YINANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKC 607
YINAN IPG YIATQGPL T DFW M+++ S ++VM+T E+ R KC
Sbjct: 79 YINANY----IPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKC 134
Query: 608 HKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWP 667
YWP E ++ G + EE + R F R + E +DV Y AWP
Sbjct: 135 DHYWPFTEEP--IAYGDITVEMISEEE--QDDWACRHF--RINYADEMQDVMHFNYTAWP 188
Query: 668 DHGVP--DDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
DHGVP + L F VR + P I+HCSA
Sbjct: 189 DHGVPTANAAESILQFVHMVRQQATKSKGPMIIHCSA 225
>pdb|2G59|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
pdb|2G59|B Chain B, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase From Homo Sapiens
Length = 297
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 107/217 (49%), Gaps = 19/217 (8%)
Query: 493 GEWALVAQFERLYRKKPGLSMLH--ANKQENVIKNRYRDISPYDATRVVL---HEAPDGD 547
++ QFE L K GL + H A+ N KNRY +I PYD +RV L +E D
Sbjct: 23 SDYKFSLQFEEL--KLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEGAD 80
Query: 548 YINANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKC 607
YINAN IPG YIATQGPL T DFW M+++ S ++VM+T E+ R KC
Sbjct: 81 YINANY----IPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQIIVMLTQCNEKRRVKC 136
Query: 608 HKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWP 667
YWP E ++ G + EE + R F R + E +DV Y AWP
Sbjct: 137 DHYWPFTEEP--IAYGDITVEMISEEE--QDDWACRHF--RINYADEMQDVMHFNYTAWP 190
Query: 668 DHGVP--DDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
DHGVP + L F VR + P I+HCSA
Sbjct: 191 DHGVPTANAAESILQFVHMVRQQATKSKGPMIIHCSA 227
>pdb|1GWZ|A Chain A, Crystal Structure Of The Catalytic Domain Of The Protein
Tyrosine Phosphatase Shp-1
Length = 299
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 114/213 (53%), Gaps = 14/213 (6%)
Query: 500 QFERLYRK--KPGLSMLHANKQENVIKNRYRDISPYDATRVVLH----EAPDGDYINANT 553
+FE L ++ K L + EN KNRY++I P+D +RV+L P DYINAN
Sbjct: 5 EFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANY 64
Query: 554 VAMEIPG-SGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWP 612
+ ++ G YIA+QG L +TV DFW M + S ++VM T VE+GR KC YWP
Sbjct: 65 IKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWP 124
Query: 613 SLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEK-RDVTQMQYLAWPDHGV 671
+G ++ + G ++++ E + + R + G+ R++ QYL+WPDHGV
Sbjct: 125 EVG--MQRAYGPYSVTNCGEH--DTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV 180
Query: 672 PDDVNRFLAFTRQV--RHERAGMVEPAIVHCSA 702
P + L+F Q+ R E P IVHCSA
Sbjct: 181 PSEPGGVLSFLDQINQRQESLPHAGPIIVHCSA 213
>pdb|2B3O|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Shp-1
Length = 532
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 116/221 (52%), Gaps = 14/221 (6%)
Query: 492 TGEWALVAQFERLYRK--KPGLSMLHANKQENVIKNRYRDISPYDATRVVLH----EAPD 545
T + +FE L ++ K L + EN KNRY++I P+D +RV+L P
Sbjct: 239 TAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPG 298
Query: 546 GDYINANTVAMEIPG-SGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGR 604
DYINAN + ++ G YIA+QG L +TV DFW M + S ++VM T VE+GR
Sbjct: 299 SDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGR 358
Query: 605 TKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEK-RDVTQMQY 663
KC YWP +G ++ + G ++++ E + + R + G+ R++ QY
Sbjct: 359 NKCVPYWPEVG--MQRAYGPYSVTNCGEH--DTTEYKLRTLQVSPLDNGDLIREIWHYQY 414
Query: 664 LAWPDHGVPDDVNRFLAFTRQV--RHERAGMVEPAIVHCSA 702
L+WPDHGVP + L+F Q+ R E P IVHCSA
Sbjct: 415 LSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHCSA 455
>pdb|4GS0|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GS0|B Chain B, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
Length = 308
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 107/197 (54%), Gaps = 12/197 (6%)
Query: 514 LHANKQENVIKNRYRDISPYDATRVVLH----EAPDGDYINANTVAMEIPG-SGIVNRYI 568
L + EN KNRY++I P+D +RV+L P DYINAN + ++ G YI
Sbjct: 43 LEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKTYI 102
Query: 569 ATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNIS 628
A+QG L +TV DFW M + S ++VM T VE+GR KC YWP +G ++ + G ++++
Sbjct: 103 ASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVG--MQRAYGPYSVT 160
Query: 629 CAKEEADPSGSFVFREFVLRDSQTGEK-RDVTQMQYLAWPDHGVPDDVNRFLAFTRQV-- 685
E + + R + G+ R++ QYL+WPDHGVP + L+F Q+
Sbjct: 161 NCGEH--DTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGVPSEPGGVLSFLDQINQ 218
Query: 686 RHERAGMVEPAIVHCSA 702
R E P IVHCSA
Sbjct: 219 RQESLPHAGPIIVHCSA 235
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/186 (41%), Positives = 96/186 (51%), Gaps = 13/186 (6%)
Query: 520 ENVIKNRYRDISPYDATRVVLHEAPDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVG 579
EN KNRY +I PYDATRV L + DYINA+ IPG+ YI TQGPL T
Sbjct: 52 ENRGKNRYNNILPYDATRVKL--SGGSDYINASY----IPGNNFRREYIVTQGPLPGTKD 105
Query: 580 DFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGS 639
DFW M+ E +VMVT VE+GR KC YWP+ ++L G + E P
Sbjct: 106 DFWKMVWEQNVHNIVMVTQCVEKGRVKCDHYWPADQDSLYY--GDLILQMLSESVLP--E 161
Query: 640 FVFREF-VLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPA 696
+ REF + + Q R + Y WPDHGVP+ + F R VR R+ P
Sbjct: 162 WTIREFKICGEEQLDAHRLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPT 221
Query: 697 IVHCSA 702
+VHCSA
Sbjct: 222 VVHCSA 227
>pdb|2QCJ|A Chain A, Native Structure Of Lyp
pdb|2QCJ|B Chain B, Native Structure Of Lyp
pdb|2QCT|A Chain A, Structure Of Lyp With Inhibitor I-C11
pdb|2QCT|B Chain B, Structure Of Lyp With Inhibitor I-C11
Length = 313
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRV---VLHEAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A K +N+ KNRY+DI PYD +RV ++ D YINAN I G YIATQG
Sbjct: 68 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANF----IKGVYGPKAYIATQG 123
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
PL++T+ DFW M+ E ++VM E G+ KC +YW GE ++L G F++SC E
Sbjct: 124 PLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGE-MQLEFGPFSVSCEAE 182
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
+ ++ R L+ E R + Q Y WPDH VP ++ L VR +
Sbjct: 183 KR--KSDYIIR--TLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQEDD 238
Query: 693 VEPAIVHCSA 702
P +HCSA
Sbjct: 239 SVPICIHCSA 248
>pdb|3H2X|A Chain A, Crystal Structure Of The Human Lymphoid Tyrosine
Phosphatase Catalytic Domain
Length = 302
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRV---VLHEAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A K +N+ KNRY+DI PYD +RV ++ D YINAN I G YIATQG
Sbjct: 49 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANF----IKGVYGPKAYIATQG 104
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
PL++T+ DFW M+ E ++VM E G+ KC +YW GE ++L G F++SC E
Sbjct: 105 PLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGE-MQLEFGPFSVSCEAE 163
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
+ ++ R L+ E R + Q Y WPDH VP ++ L VR +
Sbjct: 164 KR--KSDYIIR--TLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQEDD 219
Query: 693 VEPAIVHCSA 702
P +HCSA
Sbjct: 220 SVPICIHCSA 229
>pdb|2P6X|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
pdb|2P6X|B Chain B, Crystal Structure Of Human Tyrosine Phosphatase Ptpn22
Length = 309
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 99/190 (52%), Gaps = 12/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRV---VLHEAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A K +N+ KNRY+DI PYD +RV ++ D YINAN I G YIATQG
Sbjct: 49 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANF----IKGVYGPKAYIATQG 104
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
PL++T+ DFW M+ E ++VM E G+ KC +YW GE ++L G F++SC E
Sbjct: 105 PLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGE-MQLEFGPFSVSCEAE 163
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
+ ++ R L+ E R + Q Y WPDH VP ++ L VR +
Sbjct: 164 KR--KSDYIIR--TLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQEDD 219
Query: 693 VEPAIVHCSA 702
P +HCSA
Sbjct: 220 SVPICIHCSA 229
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 109/213 (51%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y +PD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTFPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|1EEN|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-D-A-D-Bpa-Ptyr-L-I-P-Q-Q-G
pdb|1EEO|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Acetyl-E-L-E-F-Ptyr-M-D-Y-E-Nh2
pdb|1PTY|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Phosphotyrosine Molecules
Length = 321
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHSSA 217
>pdb|1AAX|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Two Bis(Para-Phosphophenyl)methane (Bppm)
Molecules
Length = 321
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHSSA 217
>pdb|1G1F|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Tri-Phosphorylated Peptide (Rdi(Ptr)
Etd(Ptr)(Ptr)rk) From The Insulin Receptor Kinase
pdb|1G1G|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Mono-Phosphorylated Peptide (Etdy(Ptr)
Rkggkgll) From The Insulin Receptor Kinase
pdb|1G1H|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With A Bis-Phosphorylated Peptide
(Etd(Ptr)(Ptr) Rkggkgll) From The Insulin Receptor
Kinase
pdb|2B4S|A Chain A, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|C Chain C, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
Length = 298
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHASA 217
>pdb|1I57|A Chain A, Crystal Structure Of Apo Human Ptp1b (C215s) Mutant
Length = 310
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 25 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 81
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 82 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 137
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 138 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 197 PESPASFLNFLFKVRESGSLSPEHGPVVVHSSA 229
>pdb|1A5Y|A Chain A, Protein Tyrosine Phosphatase 1b Cysteinyl-Phosphate
Intermediate
Length = 330
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHXSA 217
>pdb|1OEO|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To Sulfonic
Acid
pdb|1OET|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEU|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1OEV|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
Length = 321
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHXSA 217
>pdb|1PTV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine
Length = 321
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHSSA 217
>pdb|3EU0|A Chain A, Crystal Structure Of The S-Nitrosylated Cys215 Of Ptp1b
Length = 327
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 19 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 75
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 76 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 131
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 132 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 190
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 191 PESPASFLNFLFKVRESGSLSPEHGPVVVHXSA 223
>pdb|1PTU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Hexa-Peptide
(Dadepyl-Nh2)
pdb|1PTT|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With Phosphotyrosine-Containing Tetra-Peptide
(Ac-Depyl-Nh2)
Length = 321
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHSSA 217
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 19 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 75
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G K +YW
Sbjct: 76 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKWAQYW 131
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 132 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 190
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 191 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 223
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH +A
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHAAA 217
>pdb|1PA1|A Chain A, Crystal Structure Of The C215d Mutant Of Protein Tyrosine
Phosphatase 1b
Length = 310
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRYRD+SP+D +R+ LH+ D DYINA
Sbjct: 25 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQE-DNDYINA 81
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 82 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 137
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 138 PQ-KEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENLTTQETREILHFHYTTWPDFGV 196
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VH SA
Sbjct: 197 PESPASFLNFLFKVRESGSLSPEHGPVVVHDSA 229
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRY ++SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 10/213 (4%)
Query: 492 TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINA 551
+G WA + ++ + + A +N +NRY ++SP+D +R+ LH+ D DYINA
Sbjct: 13 SGSWAAI--YQDIRHEASDFPCRVAKLPKNKNRNRYVNVSPFDHSRIKLHQE-DNDYINA 69
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + ME YI TQGPL +T G FW M+ E S VVM+ ++E+G KC +YW
Sbjct: 70 SLIKMEEAQRS----YILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKGSLKCAQYW 125
Query: 612 PSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGV 671
P E E+ N+ D + R+ L + T E R++ Y WPD GV
Sbjct: 126 PQ-KEEKEMIFEDTNLKLTLISEDIKTYYTVRQLELENLTTQETREILHFHYTTWPDFGV 184
Query: 672 PDDVNRFLAFTRQVRHERAGMVE--PAIVHCSA 702
P+ FL F +VR + E P +VHCSA
Sbjct: 185 PESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 217
>pdb|3PS5|A Chain A, Crystal Structure Of The Full-Length Human Protein
Tyrosine Phosphatase Shp-1
Length = 595
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 115/221 (52%), Gaps = 14/221 (6%)
Query: 492 TGEWALVAQFERLYRK--KPGLSMLHANKQENVIKNRYRDISPYDATRVVLH----EAPD 545
T + +FE L ++ K L + EN KNRY++I P+D +RV+L P
Sbjct: 239 TAKAGFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPG 298
Query: 546 GDYINANTVAMEIPG-SGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGR 604
DYINAN + ++ G YIA+QG L +TV DFW M + S ++VM T VE+GR
Sbjct: 299 SDYINANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGR 358
Query: 605 TKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEK-RDVTQMQY 663
KC YWP +G ++ + G ++++ E + + R + G+ R++ QY
Sbjct: 359 NKCVPYWPEVG--MQRAYGPYSVTNCGEH--DTTEYKLRTLQVSPLDNGDLIREIWHYQY 414
Query: 664 LAWPDHGVPDDVNRFLAFTRQV--RHERAGMVEPAIVHCSA 702
L+WPDHGVP + L+F Q+ R E P IVH SA
Sbjct: 415 LSWPDHGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSA 455
>pdb|2BZL|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase N14 At 1.65 A Resolution
Length = 325
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 494 EWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGD--YINA 551
E + ++E++ +KK A EN ++R R++ PY+ RV L + + YINA
Sbjct: 44 EGMVFTEYEQIPKKKANGIFSTAALPENAERSRIREVVPYEENRVELIPTKENNTGYINA 103
Query: 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYW 611
+ + + + G+ YIATQGPL T DFW M+ E G ++ MVT E GRTK H+YW
Sbjct: 104 SHIKVVVGGAEW--HYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYW 161
Query: 612 PSLGET-LELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHG 670
P LG + G+F ++ K D S + ++ +G++R V +QY WPDHG
Sbjct: 162 PKLGSKHSSATYGKFKVT-TKFRTD-SVCYATTGLKVKHLLSGQERTVWHLQYTDWPDHG 219
Query: 671 VPDDVNRFLAFTRQ---VRHERAGMVE-------PAIVHCSA 702
P+DV FL++ + VR M+E P +VHCSA
Sbjct: 220 CPEDVQGFLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSA 261
>pdb|1FPR|A Chain A, Crystal Structure Of The Complex Formed Between The
Catalytic Domain Of Shp-1 And An In Vitro Peptide
Substrate Py469 Derived From Shps-1
Length = 284
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 500 QFERLYRK--KPGLSMLHANKQENVIKNRYRDISPYDATRVVLH----EAPDGDYINANT 553
+FE L ++ K L + EN KNRY++I P+D +RV+L P DYINAN
Sbjct: 5 EFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANY 64
Query: 554 VAMEIPG-SGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWP 612
+ ++ G YIA+QG L +TV DFW M + S ++VM T VE+GR KC YWP
Sbjct: 65 IKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWP 124
Query: 613 SLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEK-RDVTQMQYLAWPDHGV 671
+G ++ + G ++++ E + + R + G+ R++ QYL+WPDHGV
Sbjct: 125 EVG--MQRAYGPYSVTNCGEH--DTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV 180
Query: 672 PDDVNRFLAFTRQV--RHERAGMVEPAIVHCSA 702
P + L+F Q+ R E P IVH SA
Sbjct: 181 PSEPGGVLSFLDQINQRQESLPHAGPIIVHSSA 213
>pdb|4GRY|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Jak1
Activation Loop Peptide
pdb|4GRZ|A Chain A, Crystal Structure Of Shp1 Catalytic Domain With Po4
Length = 288
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 14/213 (6%)
Query: 500 QFERLYRK--KPGLSMLHANKQENVIKNRYRDISPYDATRVVLH----EAPDGDYINANT 553
+FE L ++ K L + EN KNRY++I P+D +RV+L P DYINAN
Sbjct: 7 EFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANY 66
Query: 554 VAMEIPG-SGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWP 612
+ ++ G YIA+QG L +TV DFW M + S ++VM T VE+GR KC YWP
Sbjct: 67 IKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWP 126
Query: 613 SLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEK-RDVTQMQYLAWPDHGV 671
+G ++ + G ++++ E + + R + G+ R++ QYL+WPDHGV
Sbjct: 127 EVG--MQRAYGPYSVTNCGEH--DTTEYKLRTLQVSPLDNGDLIREIWHYQYLSWPDHGV 182
Query: 672 PDDVNRFLAFTRQV--RHERAGMVEPAIVHCSA 702
P + L+F Q+ R E P IVH SA
Sbjct: 183 PSEPGGVLSFLDQINQRQESLPHAGPIIVHSSA 215
>pdb|2NZ6|A Chain A, Crystal Structure Of The Ptprj Inactivating Mutant C1239s
Length = 316
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRVVL--HEAPDGDYINANTVAMEIPGSGIVNRYIATQGP 573
A EN KNRY ++ PYD +RV L DYINAN +PG +IATQGP
Sbjct: 65 AELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANY----MPGYHSKKDFIATQGP 120
Query: 574 LASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEE 633
L +T+ DFW M+ E ++M+T VE+GRTKC +YWPS G ++ E
Sbjct: 121 LPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQ---DYGDITVAMTSEI 177
Query: 634 ADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAG 691
P + R+F +++ QT E + Q + +WPDHGVPD + + F VR +++
Sbjct: 178 VLP--EWTIRDFTVKNIQTSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQSP 235
Query: 692 MVEPAIVHCSA 702
P +VH SA
Sbjct: 236 PESPILVHSSA 246
>pdb|3OLR|A Chain A, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|B Chain B, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|C Chain C, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OLR|D Chain D, Ptpn22 In Complex With Consensus Phospho-Tyrosine Peptide
1
pdb|3OMH|A Chain A, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|B Chain B, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|C Chain C, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
pdb|3OMH|D Chain D, Crystal Structure Of Ptpn22 In Complex With Skap-Hom
Ptyr75 Peptide
Length = 313
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRV---VLHEAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A K +N+ KNRY+DI PYD +RV ++ D YINAN I G YIATQG
Sbjct: 68 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANF----IKGVYGPKAYIATQG 123
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
PL++T+ DFW M+ E ++VM E G+ KC +YW GE ++L G F++SC E
Sbjct: 124 PLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGE-MQLEFGPFSVSCEAE 182
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
+ ++ R L+ E R + Q Y WPDH VP ++ L VR +
Sbjct: 183 KR--KSDYIIR--TLKVKFNSETRTIYQFHYKNWPDHDVPSSIDPILELIWDVRCYQEDD 238
Query: 693 VEPAIVHCSA 702
P +H SA
Sbjct: 239 SVPICIHSSA 248
>pdb|2HY3|A Chain A, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
pdb|2HY3|B Chain B, Crystal Structure Of The Human Tyrosine Receptor Phosphate
Gamma In Complex With Vanadate
Length = 313
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 102/209 (48%), Gaps = 25/209 (11%)
Query: 510 GLSMLHANKQENVIKNRYRDISPYDATRVVLHEAP-----DGDYINANTVAMEIPGSGIV 564
++ H+N EN KNRY +I YD +RV L P DYINAN V G
Sbjct: 46 NITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYV----DGYNKA 101
Query: 565 NRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGR 624
YIATQGPL ST DFW + E + ++V +T LVE+GR KC +YWP+ E E G
Sbjct: 102 KAYIATQGPLKSTFEDFWRXIWEQNTGIIVXITNLVEKGRRKCDQYWPT--ENSEEYG-- 157
Query: 625 FNISCAKEEADPSGSFVFREFVLRDSQT--GEK---------RDVTQMQYLAWPDHGVPD 673
NI + + R F +R+++ G+K R V Q Y WPD GVP+
Sbjct: 158 -NIIVTLKSTKIHACYTVRRFSIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDXGVPE 216
Query: 674 DVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
L F R+ R P +VHCSA
Sbjct: 217 YALPVLTFVRRSSAARXPETGPVLVHCSA 245
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 13/187 (6%)
Query: 520 ENVIKNRYRDISPYDATRVVLHEAPDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVG 579
EN +NRYRD+SPYD +RV L A + DYINA+ V +E YI TQGPL +T
Sbjct: 41 ENRNRNRYRDVSPYDHSRVKLQNA-ENDYINASLVDIEEAQRS----YILTQGPLPNTCC 95
Query: 580 DFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGS 639
FW M+ + + VVM+ +VE+ KC +YWP+ + + F++ E D
Sbjct: 96 HFWLMVWQQKTKAVVMLNRIVEKESVKCAQYWPTDDQEMLFKETGFSVKLLSE--DVKSY 153
Query: 640 FVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVE----P 695
+ L + +GE R ++ Y WPD GVP+ FL F +VR +G + P
Sbjct: 154 YTVHLLQLENINSGETRTISHFHYTTWPDFGVPESPASFLNFLFKVR--ESGSLNPDHGP 211
Query: 696 AIVHCSA 702
A++HCSA
Sbjct: 212 AVIHCSA 218
>pdb|2CFV|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Receptor Type J
Length = 316
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 101/191 (52%), Gaps = 13/191 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRVVL--HEAPDGDYINANTVAMEIPGSGIVNRYIATQGP 573
A EN KNRY ++ PYD +RV L DYINAN +PG +IATQGP
Sbjct: 65 AELAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANY----MPGYHSKKDFIATQGP 120
Query: 574 LASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEE 633
L +T+ DFW M+ E ++M+T VE+GRTKC +YWPS G ++ E
Sbjct: 121 LPNTLKDFWRMVWEKNVYAIIMLTKCVEQGRTKCEEYWPSKQAQ---DYGDITVAMTSEI 177
Query: 634 ADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAG 691
P + R+F +++ QT E + Q + + PDHGVPD + + F VR +++
Sbjct: 178 VLP--EWTIRDFTVKNIQTSESHPLRQFHFTSAPDHGVPDTTDLLINFRYLVRDYMKQSP 235
Query: 692 MVEPAIVHCSA 702
P +VHCSA
Sbjct: 236 PESPILVHCSA 246
>pdb|3BRH|A Chain A, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
pdb|3BRH|B Chain B, Protein Tyrosine Phosphatase Ptpn-22 (Lyp) Bound To The
Mono-Phosphorylated Lck Active Site Peptide
Length = 310
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 516 ANKQENVIKNRYRDISPYDATRV---VLHEAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A K +N+ KNRY+DI PYD +RV ++ D YINAN I G YIATQG
Sbjct: 49 AEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANF----IKGVYGPKAYIATQG 104
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
PL++T+ DFW M+ E ++VM E G+ KC +YW GE ++L G F++SC E
Sbjct: 105 PLSTTLLDFWRMIWEYSVLIIVMACMEYEMGKKKCERYWAEPGE-MQLEFGPFSVSCEAE 163
Query: 633 EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGM 692
+ ++ R L+ E R + Q Y WP H VP ++ L VR +
Sbjct: 164 KR--KSDYIIR--TLKVKFNSETRTIYQFHYKNWPAHDVPSSIDPILELIWDVRCYQEDD 219
Query: 693 VEPAIVHCSA 702
P +H SA
Sbjct: 220 SVPICIHSSA 229
>pdb|2JJD|A Chain A, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|B Chain B, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|C Chain C, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|D Chain D, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|E Chain E, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
pdb|2JJD|F Chain F, Protein Tyrosine Phosphatase, Receptor Type, E Isoform
Length = 599
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 98/193 (50%), Gaps = 15/193 (7%)
Query: 516 ANKQENVIKNRYRDISPYDATRVVLHE---APDGDYINANTVAMEIPGSGIVNRYIATQG 572
ANK+EN KNRY +I P D +RV+L + P DYINA+ I G N++IA QG
Sbjct: 49 ANKEENREKNRYPNILPNDHSRVILSQLDGIPCSDYINASY----IDGYKEKNKFIAAQG 104
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
P TV DFW M+ E S +VM+T L ER KCH+YWP G NI E
Sbjct: 105 PKQETVNDFWRMVWEQKSATIVMLTNLKERKEEKCHQYWPDQG-----CWTYGNIRVCVE 159
Query: 633 EADPSGSFVFREFVLRDSQ---TGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHER 689
+ + R+F ++ R V+Q+ + +WPD GVP L F ++V+
Sbjct: 160 DCVVLVDYTIRKFCIQPQLPDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLN 219
Query: 690 AGMVEPAIVHCSA 702
P +VHCSA
Sbjct: 220 PVHAGPIVVHCSA 232
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 23/216 (10%)
Query: 501 FERLYRKKPGLSMLHANKQE-----NVIKNRYRDISPYDATRVVLHEAPD---GDYINAN 552
E +RK + ++ N + N+ K R I PYD RV+L DYINA+
Sbjct: 321 LEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINAS 380
Query: 553 TVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWP 612
I G + +IATQGPLA TV DFW M+ E S +VM+T + ER + KC++YWP
Sbjct: 381 F----IDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQEREQDKCYQYWP 436
Query: 613 SLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQ----TGEK-RDVTQMQYLAWP 667
+ G ++ G I + S + R+F++ +Q GE+ R V Q + WP
Sbjct: 437 TEG---SVTHGEITIEIKNDTL--SEAISIRDFLVTLNQPQARQGEQVRVVRQFHFHGWP 491
Query: 668 DHGVPDDVNRFLAFTRQV-RHERAGMVEPAIVHCSA 702
+ G+P + + V + ++ P VHCSA
Sbjct: 492 EIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSA 527
>pdb|1YFO|A Chain A, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
pdb|1YFO|B Chain B, Receptor Protein Tyrosine Phosphatase Alpha, Domain 1 From
Mouse
Length = 302
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 516 ANKQENVIKNRYRDISPYDATRVVL---HEAPDGDYINANTVAMEIPGSGIVNRYIATQG 572
A+K+EN KNRY +I PYD +RV L PD DYINA+ I G N++IA QG
Sbjct: 50 ASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASF----INGYQEKNKFIAAQG 105
Query: 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKE 632
P TV DFW M+ E + +VMVT L ER KC +YWP G N+ + E
Sbjct: 106 PKEETVNDFWRMIWEQNTATIVMVTNLKERKECKCAQYWPDQG-----CWTYGNVRVSVE 160
Query: 633 EADPSGSFVFREFVLRDSQTGE------KRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVR 686
+ + R+F ++ Q G+ +R +TQ + +WPD GVP L F ++V+
Sbjct: 161 DVTVLVDYTVRKFCIQ--QVGDVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVK 218
Query: 687 HERAGMVEPAIVHCSA 702
+VHCSA
Sbjct: 219 ACNPQYAGAIVVHCSA 234
>pdb|3S3E|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3E|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster
pdb|3S3F|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3F|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecule Inhibitor
Vanadate
pdb|3S3H|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3H|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Phosphopeptide Substrate
Gp4
pdb|3S3K|A Chain A, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
pdb|3S3K|B Chain B, Crystal Structure Of The Catalytic Domain Of Ptp10d From
Drosophila Melanogaster With A Small Molecular Inhibitor
Para-Nitrocatechol Sulphate
Length = 307
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/206 (34%), Positives = 98/206 (47%), Gaps = 13/206 (6%)
Query: 500 QFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPD---GDYINANTVAM 556
+FE L A+ N KNR+ +I PYD +R L D DYINAN V
Sbjct: 49 EFEELKHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYV-- 106
Query: 557 EIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGE 616
PG +I TQGPL ST DFW M E+ S +VM+T E+GR KC +YWP+ +
Sbjct: 107 --PGHNSPREFIVTQGPLHSTRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWPN--D 162
Query: 617 TLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVN 676
T+ + G + + +V EF+L + E+R + + WPD GVP+
Sbjct: 163 TVPVFYGDIKVQILNDSH--YADWVMTEFML--CRGSEQRILRHFHFTTWPDFGVPNPPQ 218
Query: 677 RFLAFTRQVRHERAGMVEPAIVHCSA 702
+ F R R P +VHCSA
Sbjct: 219 TLVRFVRAFRDRIGAEQRPIVVHCSA 244
>pdb|1YGR|A Chain A, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGR|B Chain B, Crystal Structure Of The Tandem Phosphatase Domain Of Rptp
Cd45
pdb|1YGU|A Chain A, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
pdb|1YGU|B Chain B, Crystal Structure Of The Tandem Phosphatase Domains Of
Rptp Cd45 With A Ptyr Peptide
Length = 610
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 104/211 (49%), Gaps = 13/211 (6%)
Query: 497 LVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGD----YINAN 552
+A+F+ + R + A K N KNRY DI PYD RV L E +GD YINA+
Sbjct: 30 FLAEFQSIPRVFSKFPIKEARKPFNQNKNRYVDILPYDYNRVELSEI-NGDAGSNYINAS 88
Query: 553 TVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWP 612
I G +YIA QGP TV DFW + E +T++V VT E R KC +YWP
Sbjct: 89 Y----IDGFKEPRKYIAAQGPRDETVDDFWRXIWEQKATVIVXVTRCEEGNRNKCAEYWP 144
Query: 613 SLGETLELSGGRFNISCAKEEADPSGSFVFREF-VLRDSQTGEKRDVTQMQYLAWPDHGV 671
S E G ++ + ++ ++ ++ + R+VT +Q+ +WPDHGV
Sbjct: 145 SXEEGTRAFG---DVVVKINQHKRCPDYIIQKLNIVNKKEKATGREVTHIQFTSWPDHGV 201
Query: 672 PDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
P+D + L R+V P +VH SA
Sbjct: 202 PEDPHLLLKLRRRVNAFSNFFSGPIVVHSSA 232
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 42/236 (17%)
Query: 497 LVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVL-HE------------- 542
L A+F+RL + + N++EN KNR ++ PYD RV L HE
Sbjct: 321 LEAEFQRLPSYRSWRTQHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDE 380
Query: 543 --------APDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVV 594
YINA+ I IA QGPL T+GDFW + + ++V
Sbjct: 381 SSDDDSDSEEPSKYINASF----IXSYWKPEVXIAAQGPLKETIGDFWQXIFQRKVKVIV 436
Query: 595 MVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGE 654
+T L + C +YW GE + G +I ++ D S ++ R F LR S+ +
Sbjct: 437 XLTELKHGDQEICAQYW---GEGKQTYG---DIEVDLKDTDKSSTYTLRVFELRHSKRKD 490
Query: 655 KRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHE----------RAGMVEPAIVHC 700
R V Q QY W +P + ++ + V+ + + P ++HC
Sbjct: 491 SRTVYQYQYTNWSVEQLPAEPKELISXIQVVKQKLPQKNSSEGNKHHKSTPLLIHC 546
>pdb|1P15|A Chain A, Crystal Structure Of The D2 Domain Of Rptpa
pdb|1P15|B Chain B, Crystal Structure Of The D2 Domain Of Rptpa
Length = 253
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 19/197 (9%)
Query: 513 MLHANKQENVIKNRYRDISPYDATRVVL---HEAPDGDYINANTVAMEIPGSGIVNRYIA 569
M N N+ KNR I PY+ RV++ + DY+NA+ I G + YIA
Sbjct: 1 MRTGNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASF----IDGYRQKDSYIA 56
Query: 570 TQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISC 629
+QGPL T+ DFW M+ E S +VM+T L ERG+ KC +YWPS G +S G +
Sbjct: 57 SQGPLLHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWPSDG---LVSYGDITVEL 113
Query: 630 AKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDD----VNRFLAFTRQV 685
KEE S+ R+ ++ +++ + R + Q + WP+ G+P D +N A +Q
Sbjct: 114 KKEE--ECESYTVRDLLVTNTRENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQ- 170
Query: 686 RHERAGMVEPAIVHCSA 702
+++G P VHCSA
Sbjct: 171 -QQQSGN-HPITVHCSA 185
>pdb|2GP0|A Chain A, Heptp Catalytic Domain (Residues 44-339), S225d Mutant
Length = 309
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+ I P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 127
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 128 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 180
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+RDV + + AWPDH P+ L +V E A P +V
Sbjct: 181 TVRQLTIQYQE--ERRDVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 238
Query: 699 HCSA 702
HCSA
Sbjct: 239 HCSA 242
>pdb|2A3K|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Ptpn7 (Heptp, Hematopoietic Protein
Tyrosine Phosphatase)
Length = 296
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+ I P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 60 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 116
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 117 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 169
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+R V + + AWPDH P+ L +V E A P +V
Sbjct: 170 TVRQLTIQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 227
Query: 699 HCSA 702
HCSA
Sbjct: 228 HCSA 231
>pdb|1ZC0|A Chain A, Crystal Structure Of Human Hematopoietic Tyrosine
Phosphatase (heptp) Catalytic Domain
Length = 309
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+ I P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 127
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 128 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 180
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+R V + + AWPDH P+ L +V E A P +V
Sbjct: 181 TVRQLTIQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 238
Query: 699 HCSA 702
HCSA
Sbjct: 239 HCSA 242
>pdb|3O4S|A Chain A, Crystal Structure Of Heptp With A Closed Wpd Loop And An
Ordered E- Loop
pdb|3O4T|A Chain A, Crystal Structure Of Heptp With An Open Wpd Loop And
Partially Depleted Active Site
pdb|3O4U|A Chain A, Crystal Structure Of Heptp With An Atypically Open Wpd
Loop
Length = 308
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+ I P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 70 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 126
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 127 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 179
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+R V + + AWPDH P+ L +V E A P +V
Sbjct: 180 TVRQLTIQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 237
Query: 699 HCSA 702
HCSA
Sbjct: 238 HCSA 241
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 496 ALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAP---DGDYINAN 552
+ ++E + R+ P + + N+ KNRY D+ D TRV L + DYINA+
Sbjct: 27 GIYEEYEDIRRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINAS 86
Query: 553 TVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWP 612
+ G N YI TQGPL +T DFW M+ E ++VM T E GR KC +YWP
Sbjct: 87 F----MDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIVMTTRFEEGGRRKCGQYWP 142
Query: 613 SLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVP 672
L + + G ++ E + + +++ +KR VT Q+L+WPD+GVP
Sbjct: 143 -LEKDSRIRFGFLTVTNLGVEN--MNHYKKTTLEIHNTEERQKRQVTHFQFLSWPDYGVP 199
Query: 673 DDVNRFLAFTRQVRHERAGMVE-------------PAIVHCSA 702
+ F R VR++++ V P +VHCSA
Sbjct: 200 SSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCSA 242
>pdb|3D42|A Chain A, Crystal Structure Of Heptp In Complex With A
Monophosphorylated Erk2 Peptide
pdb|3D44|A Chain A, Crystal Structure Of Heptp In Complex With A Dually
Phosphorylated Erk2 Peptide Mimetic
Length = 308
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 94/184 (51%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+DI P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 70 KDRYKDILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 126
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 127 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 179
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+R V + + AWPDH P+ L +V E A P +V
Sbjct: 180 TVRQLTIQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 237
Query: 699 HCSA 702
H SA
Sbjct: 238 HSSA 241
>pdb|2QDC|A Chain A, Crystal Structure Of The Heptp Catalytic Domain D236a
Mutant
Length = 309
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+ I P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 127
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 128 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 180
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+R V + + AWP H P+ L +V E A P +V
Sbjct: 181 TVRQLTIQYQE--ERRSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 238
Query: 699 HCSA 702
HCSA
Sbjct: 239 HCSA 242
>pdb|2HVL|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant
pdb|2QDP|A Chain A, Crystal Structure Of The Heptp Catalytic Domain C270s
Mutant Crystallized In Ammonium Acetate
Length = 309
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+ I P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 127
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 128 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 180
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+R V + + AWPDH P+ L +V E A P +V
Sbjct: 181 TVRQLTIQYQE--ERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 238
Query: 699 HCSA 702
H SA
Sbjct: 239 HSSA 242
>pdb|2QDM|A Chain A, Crystal Structure Of The Heptp Catalytic Domain
C270sD236AQ314A Mutant
Length = 309
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 524 KNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGD 580
K+RY+ I P +RV L A DGDYINAN + G YIATQGP+ +TV D
Sbjct: 71 KDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGY---DGKEKVYIATQGPMPNTVSD 127
Query: 581 FWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSF 640
FW M+ + +L+VM+T L E G+ KC YWP+ ET G F I + P +
Sbjct: 128 FWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEETY----GPFQIRIQDMKECP--EY 180
Query: 641 VFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRH--ERAGMVEPAIV 698
R+ ++ + E+R V + + AWP H P+ L +V E A P +V
Sbjct: 181 TVRQLTIQYQE--ERRSVKHILFSAWPAHQTPESAGPLLRLVAEVEESPETAAHPGPIVV 238
Query: 699 HCSA 702
H SA
Sbjct: 239 HSSA 242
>pdb|2EMT|A Chain A, Crystal Structure Analysis Of The Radixin Ferm Domain
Complexed With Adhesion Molecule Psgl-1
pdb|2EMT|B Chain B, Crystal Structure Analysis Of The Radixin Ferm Domain
Complexed With Adhesion Molecule Psgl-1
pdb|2EMS|A Chain A, Crystal Structure Analysis Of The Radixin Ferm Domain
Complexed With Adhesion Molecule Cd43
Length = 322
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KF+ D S+ L +E T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 80 FKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQ------ 133
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
A+ GDY+ + HKPGYL+ L+P + E+ E +
Sbjct: 134 --------------------AKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEER 173
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G D+ YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 174 IQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHD 233
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230
+L W +I ISF K+F ++ P + F R K + C+ +
Sbjct: 234 DKLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMGN 289
Query: 231 HTFF 234
H +
Sbjct: 290 HELY 293
>pdb|2ZPY|A Chain A, Crystal Structure Of The Mouse Radxin Ferm Domain
Complexed With The Mouse Cd44 Cytoplasmic Peptide
Length = 312
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 113/245 (46%), Gaps = 42/245 (17%)
Query: 2 NFYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYI 60
F FR KF+ D S+ L +E T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 79 QFKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQ----- 133
Query: 61 SENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMEL 112
A+ GDY+ + HKPGYL+ L+P + E+ E
Sbjct: 134 ---------------------AKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEE 172
Query: 113 KIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHA 172
+I+ H+ H+G D+ YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 173 RIQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEH 232
Query: 173 GARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229
+L W +I ISF K+F ++ P + F R K + C+
Sbjct: 233 DDKLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMG 288
Query: 230 HHTFF 234
+H +
Sbjct: 289 NHELY 293
>pdb|1J19|A Chain A, Crystal Structure Of The Radxin Ferm Domain Complexed With
The Icam-2 Cytoplasmic Peptide
Length = 317
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KF+ D S+ L +E T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 78 FKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQ------ 131
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
A+ GDY+ + HKPGYL+ L+P + E+ E +
Sbjct: 132 --------------------AKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEER 171
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G D+ YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 172 IQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHD 231
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230
+L W +I ISF K+F ++ P + F R K + C+ +
Sbjct: 232 DKLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMGN 287
Query: 231 HTFF 234
H +
Sbjct: 288 HELY 291
>pdb|2D10|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-1 C-Terminal Tail Peptide
pdb|2D10|B Chain B, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-1 C-Terminal Tail Peptide
pdb|2D10|C Chain C, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-1 C-Terminal Tail Peptide
pdb|2D10|D Chain D, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-1 C-Terminal Tail Peptide
pdb|2D11|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-2 C-Terminal Tail Peptide
pdb|2D11|B Chain B, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-2 C-Terminal Tail Peptide
pdb|2D11|C Chain C, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-2 C-Terminal Tail Peptide
pdb|2D11|D Chain D, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nherf-2 C-Terminal Tail Peptide
pdb|2YVC|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nep Cytoplasmic Tail
pdb|2YVC|B Chain B, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nep Cytoplasmic Tail
pdb|2YVC|C Chain C, Crystal Structure Of The Radixin Ferm Domain Complexed
With The Nep Cytoplasmic Tail
Length = 312
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KF+ D S+ L +E T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 80 FKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQ------ 133
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
A+ GDY+ + HKPGYL+ L+P + E+ E +
Sbjct: 134 --------------------AKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEER 173
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G D+ YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 174 IQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHD 233
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230
+L W +I ISF K+F ++ P + F R K + C+ +
Sbjct: 234 DKLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMGN 289
Query: 231 HTFF 234
H +
Sbjct: 290 HELY 293
>pdb|2D2Q|A Chain A, Crystal Structure Of The Dimerized Radixin Ferm Domain
pdb|2D2Q|B Chain B, Crystal Structure Of The Dimerized Radixin Ferm Domain
Length = 310
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KF+ D S+ L +E T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 78 FKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQ------ 131
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
A+ GDY+ + HKPGYL+ L+P + E+ E +
Sbjct: 132 --------------------AKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEER 171
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G D+ YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 172 IQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHD 231
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230
+L W +I ISF K+F ++ P + F R K + C+ +
Sbjct: 232 DKLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMGN 287
Query: 231 HTFF 234
H +
Sbjct: 288 HELY 291
>pdb|1GC6|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed
With Inositol-(1,4,5)-Triphosphate
pdb|1GC7|A Chain A, Crystal Structure Of The Radixin Ferm Domain
Length = 297
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KF+ D S+ L +E T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 78 FKFRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQ------ 131
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
A+ GDY+ + HKPGYL+ L+P + E+ E +
Sbjct: 132 --------------------AKYGDYNKEIHKPGYLANDRLLPQRVLEQHKLTKEQWEER 171
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G D+ YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 172 IQNWHEEHRGMLREDSMMEYLKIAQDLEMYGVNYFEIKNKKGTELWLGVDALGLNIYEHD 231
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230
+L W +I ISF K+F ++ P + F R K + C+ +
Sbjct: 232 DKLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMGN 287
Query: 231 HTFF 234
H +
Sbjct: 288 HELY 291
>pdb|1H4R|A Chain A, Crystal Structure Of The Ferm Domain Of Merlin, The
Neurofibromatosis 2 Tumor Suppressor Protein
Length = 314
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 42/245 (17%)
Query: 2 NFYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYI 60
F+F KFY + + L +E T++ F+LQ++K IL ++ P + LLASY VQ
Sbjct: 94 TFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQ----- 148
Query: 61 SENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ-------TEEM-EL 112
A+ GDY P HK G+L+ L+P + T EM E
Sbjct: 149 ---------------------AKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEE 187
Query: 113 KIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHA 172
+I + H+G++ +AE YL+ A+ EMYGV+ ++ + ++ LGV A GL I+
Sbjct: 188 RITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDP 247
Query: 173 GARLN---LLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229
RL W +I IS+ K+F ++ P + + FN + R K + + C+
Sbjct: 248 ENRLTPKISFPWNEIRNISYSDKEFTIK----PLDKKIDVFKFNSSKLRVNKLILQLCIG 303
Query: 230 HHTFF 234
+H F
Sbjct: 304 NHDLF 308
>pdb|1H4R|B Chain B, Crystal Structure Of The Ferm Domain Of Merlin, The
Neurofibromatosis 2 Tumor Suppressor Protein
Length = 314
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 42/245 (17%)
Query: 2 NFYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYI 60
F+F KFY + + L +E T++ F+LQ++K IL ++ P + LLASY VQ
Sbjct: 94 TFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQ----- 148
Query: 61 SENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ-------TEEM-EL 112
A+ GDY P HK G+L+ L+P + T EM E
Sbjct: 149 ---------------------AKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEE 187
Query: 113 KIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHA 172
+I + H+G++ +AE YL+ A+ EMYGV+ ++ + ++ LGV A GL I+
Sbjct: 188 RITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDP 247
Query: 173 GARLN---LLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229
RL W +I IS+ K+F ++ P + + FN + R K + + C+
Sbjct: 248 ENRLTPKISFPWNEIRNISYSDKEFTIK----PLDKKIDVFKFNSSKLRVNKLILQLCIG 303
Query: 230 HHTFF 234
+H F
Sbjct: 304 NHDLF 308
>pdb|3U8Z|A Chain A, Human Merlin Ferm Domain
pdb|3U8Z|B Chain B, Human Merlin Ferm Domain
pdb|3U8Z|C Chain C, Human Merlin Ferm Domain
pdb|3U8Z|D Chain D, Human Merlin Ferm Domain
Length = 300
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 42/245 (17%)
Query: 2 NFYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYI 60
F+F KFY + + L +E T++ F+LQ++K IL ++ P + LLASY VQ
Sbjct: 81 TFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKIYCPPEASVLLASYAVQ----- 135
Query: 61 SENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ-------TEEM-EL 112
A+ GDY P HK G+L+ L+P + T EM E
Sbjct: 136 ---------------------AKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEE 174
Query: 113 KIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHA 172
+I + H+G++ +AE YL+ A+ EMYGV+ ++ + ++ LGV A GL I+
Sbjct: 175 RITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFAIRNKKGTELLLGVDALGLHIYDP 234
Query: 173 GARLN---LLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229
RL W +I IS+ K+F ++ P + + FN + R K + + C+
Sbjct: 235 ENRLTPKISFPWNEIRNISYSDKEFTIK----PLDKKIDVFKFNSSKLRVNKLILQLCIG 290
Query: 230 HHTFF 234
+H F
Sbjct: 291 NHDLF 295
>pdb|1ISN|A Chain A, Crystal Structure Of Merlin Ferm Domain
Length = 323
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 117/245 (47%), Gaps = 42/245 (17%)
Query: 2 NFYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYI 60
F+F KFY + + L +E T++ F+LQ++K IL ++ P + LLASY VQ
Sbjct: 76 TFHFLAKFYPENAEEELVQEITQHLFFLQVKKQILDEKVYCPPEASVLLASYAVQ----- 130
Query: 61 SENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ-------TEEM-EL 112
A+ GDY P HK G+L+ L+P + T EM E
Sbjct: 131 ---------------------AKYGDYDPSVHKRGFLAQEELLPKRVINLYQMTPEMWEE 169
Query: 113 KIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHA 172
+I + H+G++ +AE YL+ A+ EMYGV+ ++ + ++ LGV A GL I+
Sbjct: 170 RITAWYAEHRGRARDEAEMEYLKIAQDLEMYGVNYFTIRNKKGTELLLGVDALGLHIYDP 229
Query: 173 GARLN---LLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229
RL W +I IS+ K+F ++ P + + FN + R K + + C+
Sbjct: 230 ENRLTPKISFPWNEIRNISYSDKEFTIK----PLDKKIDVFKFNSSKLRVNKLILQLCIG 285
Query: 230 HHTFF 234
+H F
Sbjct: 286 NHDLF 290
>pdb|1SGH|A Chain A, Moesin Ferm Domain Bound To Ebp50 C-Terminal Peptide
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KFY D S+ L ++ T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 78 FKFRAKFYPEDVSEELIQDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQ------ 131
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
++ GD++ + HK GYL+G L+P + ++ E +
Sbjct: 132 --------------------SKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEER 171
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G DA YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 172 IQVWHEEHRGMLREDAVLEYLKIAQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYEQN 231
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230
RL W +I ISF K+F ++ P + F R K + C+ +
Sbjct: 232 DRLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMGN 287
Query: 231 HTFF 234
H +
Sbjct: 288 HELY 291
>pdb|1E5W|A Chain A, Structure Of Isolated Ferm Domain And First Long Helix Of
Moesin
Length = 346
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 42/244 (17%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KFY D S+ L ++ T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 78 FKFRAKFYPEDVSEELIQDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQ------ 131
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
++ GD++ + HK GYL+G L+P + ++ E +
Sbjct: 132 --------------------SKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEER 171
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G DA YL+ A+ EMYGV+ K+ + ++ LGV A GL I+
Sbjct: 172 IQVWHEEHRGMLREDAVLEYLKIAQDLEMYGVNYFSIKNKKGSELWLGVDALGLNIYEQN 231
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230
RL W +I ISF K+F ++ P + F R K + C+ +
Sbjct: 232 DRLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILALCMGN 287
Query: 231 HTFF 234
H +
Sbjct: 288 HELY 291
>pdb|1NI2|A Chain A, Structure Of The Active Ferm Domain Of Ezrin
pdb|1NI2|B Chain B, Structure Of The Active Ferm Domain Of Ezrin
Length = 296
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 111/245 (45%), Gaps = 42/245 (17%)
Query: 2 NFYFRVKFYVSD-PSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYI 60
F FR KFY D +L ++ T+ F+LQ+++ IL+ + P TA LL SY VQ
Sbjct: 76 QFKFRAKFYPEDVAEELIQDITQKLFFLQVKEGILSDEIYCPPETAVLLGSYAVQ----- 130
Query: 61 SENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMEL 112
A+ GDY+ + HK GYLS L+P + ++ E
Sbjct: 131 ---------------------AKFGDYNKEVHKSGYLSSERLIPQRVMDQHKLTRDQWED 169
Query: 113 KIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHA 172
+I+ H H+G +A YL+ A+ EMYG++ K+ + D+ LGV A GL I+
Sbjct: 170 RIQVWHAEHRGMLKDNAMLEYLKIAQDLEMYGINYFEIKNKKGTDLWLGVDALGLNIYEK 229
Query: 173 GARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229
+L W +I ISF K+F ++ P + F R K + + C+
Sbjct: 230 DDKLTPKIGFPWSEIRNISFNDKKFVIK----PIDKKAPDFVFYAPRLRINKRILQLCMG 285
Query: 230 HHTFF 234
+H +
Sbjct: 286 NHELY 290
>pdb|4AZ1|A Chain A, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
pdb|4AZ1|B Chain B, Crystal Structure Of The Trypanosoma Cruzi Protein
Tyrosine Phosphatase Tcptp1, A Potential Therapeutic
Target For Chagas' Disease
Length = 302
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 500 QFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRV-VLHEAPDGD---YINANTVA 555
+F L R++ S+ A +N KNRY DI +AT + +AP YIN N +
Sbjct: 24 EFSLLLRQEDPRSISFATSLKNRHKNRYLDILANEATLYPQVTDAPGASTPYYINGNLID 83
Query: 556 MEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG 615
+++P ++++A Q P+ + DF ML E +LV+MVT L E G K +YWP
Sbjct: 84 LDLP-----HKFVACQAPVVQGIPDFLAMLYEKKISLVIMVTKLEEGGFVKADRYWPE-- 136
Query: 616 ETLELSGGRFNIS--CAKE-EADPSGSF-------VFREFVLRDSQTGEKRDVTQMQYLA 665
E G +S C DP ++ + R +++ TQ+QY
Sbjct: 137 ---ERGSGSIAVSGNCGLTISEDPGKAYEVEDELKITRRYLILQRADEPPHKFTQVQYTG 193
Query: 666 WPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
WPDHG+P A V++ + P +VHCSA
Sbjct: 194 WPDHGIPQSATSLEALLTNVKNSPTTV--PVVVHCSA 228
>pdb|2RQ1|A Chain A, Solution Structure Of The 4.1r Ferm Alpha Lobe Domain
Length = 109
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 26/130 (20%)
Query: 13 DPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMAD 72
DP++L E+ TRY+ LQ+R+DI+A RL + +T LL SYT+Q
Sbjct: 5 DPAQLTEDITRYYLCLQLRQDIVAGRLPCSFATLALLGSYTIQ----------------- 47
Query: 73 TKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLHKGQSPADAEYN 132
+ELGDY P+ H Y+S L P QT+E+E K+ ELHK ++ +PA A+
Sbjct: 48 ---------SELGDYDPELHGVDYVSDFKLAPNQTKELEEKVMELHKSYRSMTPAQADLE 98
Query: 133 YLEHAKRCEM 142
+LE+AK+ M
Sbjct: 99 FLENAKKLSM 108
>pdb|1EF1|A Chain A, Crystal Structure Of The Moesin Ferm DomainTAIL DOMAIN
COMPLEX
pdb|1EF1|B Chain B, Crystal Structure Of The Moesin Ferm DomainTAIL DOMAIN
COMPLEX
Length = 294
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 101/207 (48%), Gaps = 38/207 (18%)
Query: 3 FYFRVKFYVSDPSK-LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
F FR KFY D S+ L ++ T+ F+LQ+++ IL + P TA LLASY VQ
Sbjct: 75 FKFRAKFYPEDVSEELIQDITQRLFFLQVKEGILNDDIYCPPETAVLLASYAVQ------ 128
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMELK 113
++ GD++ + HK GYL+G L+P + ++ E +
Sbjct: 129 --------------------SKYGDFNKEVHKSGYLAGDKLLPQRVLEQHKLNKDQWEER 168
Query: 114 IEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAG 173
I+ H+ H+G DA YL+ A+ E YGV+ K+ + ++ LGV A GL I+
Sbjct: 169 IQVWHEEHRGXLREDAVLEYLKIAQDLEXYGVNYFSIKNKKGSELWLGVDALGLNIYEQN 228
Query: 174 ARLNL---LSWVKIVKISFKRKQFFVQ 197
RL W +I ISF K+F ++
Sbjct: 229 DRLTPKIGFPWSEIRNISFNDKKFVIK 255
>pdb|2A8B|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Phosphatase Receptor, Type R
Length = 283
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 87/185 (47%), Gaps = 18/185 (9%)
Query: 524 KNRYRDISPYDATRVVLHEAPDGD----YINANTVAMEIPGSGIVNRYIATQGPLASTVG 579
KNRY+ I P +RV L D YINAN + SG +IATQGP+ +TV
Sbjct: 46 KNRYKTILPNPLSRVCLRPKNVTDSLSTYINANYIR---GYSGKEKAFIATQGPMINTVD 102
Query: 580 DFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGS 639
DFW M+ + S ++VM+T L E+ KC YWP E + G + + E D +
Sbjct: 103 DFWQMVWQEDSPVIVMITKLKEKNE-KCVLYWP---EKRGIYGKVEVLVISVNECD---N 155
Query: 640 FVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMV--EPAI 697
+ R VL+ Q + V Y +WPDH PD L V +R P +
Sbjct: 156 YTIRNLVLK--QGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASQGRGPVV 213
Query: 698 VHCSA 702
VHCSA
Sbjct: 214 VHCSA 218
>pdb|1JLN|A Chain A, Crystal Structure Of The Catalytic Domain Of Protein
Tyrosine Phosphatase Ptp-SlBR7
Length = 297
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 524 KNRYRDISPYDATRVVLHEAPDGD----YINANTVAMEIPGSGIVNRYIATQGPLASTVG 579
KNRY+ I P +RV L D YINAN + SG +IATQGP+ +TV
Sbjct: 59 KNRYKTILPNPLSRVCLRPKNITDSLSTYINANYIR---GYSGKEKAFIATQGPMINTVN 115
Query: 580 DFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGS 639
DFW M+ + S ++VM+T L E+ KC YWP E + G + E D +
Sbjct: 116 DFWQMVWQEDSPVIVMITKLKEKNE-KCVLYWP---EKRGIYGKVEVLVTGVTECD---N 168
Query: 640 FVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMV--EPAI 697
+ R VL+ Q + V Y +WPDH PD L V +R P +
Sbjct: 169 YTIRNLVLK--QGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVV 226
Query: 698 VHCSA 702
VHCSA
Sbjct: 227 VHCSA 231
>pdb|2BIJ|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 (step, Striatum Enriched Enriched
Phosphatase)
Length = 305
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 89/190 (46%), Gaps = 23/190 (12%)
Query: 522 VIKNRYRDISPYDATRVVLHEAPDGD-----YINANTVAMEIPGSGIVNR-YIATQGPLA 575
V KNRY+ I P +RV L +PD D YINAN I G G + YIATQGP+
Sbjct: 65 VRKNRYKTILPNPHSRVCL-TSPDPDDPLSSYINANY----IRGYGGEEKVYIATQGPIV 119
Query: 576 STVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEAD 635
STV DFW M+ + + ++VM+T +E KC +YWP E + G + D
Sbjct: 120 STVADFWRMVWQEHTPIIVMITN-IEEMNEKCTEYWPE--EQVAYDGVEITVQKVIHTED 176
Query: 636 PSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVR---HERAGM 692
+R ++ E+R + + +WPD PD L R+V +
Sbjct: 177 ------YRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPH 230
Query: 693 VEPAIVHCSA 702
P IVHCSA
Sbjct: 231 CAPIIVHCSA 240
>pdb|2I1J|A Chain A, Moesin From Spodoptera Frugiperda At 2.1 Angstroms
Resolution
pdb|2I1K|A Chain A, Moesin From Spodoptera Frugiperda Reveals The Coiled-Coil
Domain At 3.0 Angstrom Resolution
Length = 575
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 107/245 (43%), Gaps = 42/245 (17%)
Query: 2 NFYFRVKFYVSD-PSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYI 60
F FR KFY D +L +E T FYLQ++ IL+ + P T+ LLASY VQ
Sbjct: 77 QFKFRAKFYPEDVADELIQEITLKLFYLQVKNAILSDEIYCPPETSVLLASYAVQ----- 131
Query: 61 SENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQT--------EEMEL 112
A GD++P H PG+L+ L+P + EE E
Sbjct: 132 ---------------------ARHGDHNPAVHGPGFLANDRLLPQRVTDQHKMSREEWEQ 170
Query: 113 KIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHA 172
I + H+G DA YL+ A+ EMYGV+ ++ ++ ++ LGV A GL I+
Sbjct: 171 SITNWWQEHRGMLREDAMMEYLKIAQDLEMYGVNYFEIRNKKNTELWLGVDALGLNIYEK 230
Query: 173 GARLNL---LSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229
+L W +I ISF ++F ++ P + F R K + C+
Sbjct: 231 DDKLTPKIGFPWSEIRNISFNDRKFIIK----PIDKKAPDFVFFAPRVRVNKRILALCMG 286
Query: 230 HHTFF 234
+H +
Sbjct: 287 NHELY 291
>pdb|2CJZ|A Chain A, Crystal Structure Of The C472s Mutant Of Human Protein
Tyrosine Phosphatase Ptpn5 (Step, Striatum Enriched
Phosphatase) In Complex With Phosphotyrosine
Length = 305
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 90/192 (46%), Gaps = 27/192 (14%)
Query: 522 VIKNRYRDISPYDATRVVLHEAPDGD-----YINANTVAMEIPGSGIVNR-YIATQGPLA 575
V KNRY+ I P +RV L +PD D YINAN I G G + YIATQGP+
Sbjct: 65 VRKNRYKTILPNPHSRVCL-TSPDPDDPLSSYINANY----IRGYGGEEKVYIATQGPIV 119
Query: 576 STVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEAD 635
STV DFW M+ + + ++VM+T +E KC +YWP E + G + D
Sbjct: 120 STVADFWRMVWQEHTPIIVMITN-IEEMNEKCTEYWPE--EQVAYDGVEITVQKVIHTED 176
Query: 636 PSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVE- 694
+R ++ E+R + + +WPD PD L R+V E A E
Sbjct: 177 ------YRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREV--EEAAQQEG 228
Query: 695 ----PAIVHCSA 702
P IVH SA
Sbjct: 229 PHCAPIIVHSSA 240
>pdb|2BV5|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase Ptpn5 At 1.8a Resolution
Length = 282
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 522 VIKNRYRDISPYDATRVVLHEAPDGD-----YINANTVAMEIPGSGIVNR-YIATQGPLA 575
V KNRY+ I P +RV L +PD D YINAN + G G + YIATQGP+
Sbjct: 44 VRKNRYKTILPNPHSRVCL-TSPDPDDPLSSYINANYIR----GYGGEEKVYIATQGPIV 98
Query: 576 STVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEAD 635
STV DFW M+ + + ++VM+T +E KC +YWP E + G + D
Sbjct: 99 STVADFWRMVWQEHTPIIVMITN-IEEMNEKCTEYWPE--EQVAYDGVEITVQKVIHTED 155
Query: 636 PSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVR---HERAGM 692
+R ++ E+R + + +WPD PD L R+V +
Sbjct: 156 ------YRLRLISLKSGTEERGLKHYWFTSWPDQKTPDRAPPLLHLVREVEEAAQQEGPH 209
Query: 693 VEPAIVHCSA 702
P IVH SA
Sbjct: 210 CAPIIVHXSA 219
>pdb|3M4U|A Chain A, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
pdb|3M4U|B Chain B, Crystal Structure Of Trypanosoma Brucei Protein Tyrosine
Phosphatase Tbptp1
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 96/216 (44%), Gaps = 21/216 (9%)
Query: 500 QFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDAT------RVVLHEAPDGDYINANT 553
+F +L R++ ++ +N KNRY DI + T + V + YIN N
Sbjct: 24 EFVQLQRQENPRNINFTTSLKNRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYINGNL 83
Query: 554 VAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS 613
+ +++P + ++A Q P+ V DF L E LVVM+T L E G K +YWP
Sbjct: 84 IDLDLPHT-----FVACQAPVPQGVPDFLETLSEKKVDLVVMLTKLREGGVLKAERYWPE 138
Query: 614 LGE-TLEL-SGGRFNISCAKE-----EADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAW 666
E +L G I ++ E D V R V+ R V Q+QY+ W
Sbjct: 139 EEEDSLSFPESGHDAIKVTRDAEASYEVDAELDIVRRPLVIHVPGKPMHR-VLQVQYVGW 197
Query: 667 PDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702
PDHGVP+ F +++ P +VHCSA
Sbjct: 198 PDHGVPESAASFDELLSVIKN--CVTTSPILVHCSA 231
>pdb|2VPH|A Chain A, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Non-Receptor Type 4, Pdz Domain
pdb|2VPH|B Chain B, Crystal Structure Of The Human Protein Tyrosine
Phosphatase, Non-Receptor Type 4, Pdz Domain
Length = 100
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 421 IRIAPDEQGRFGFNVKGGADLGMPILV 447
IR+ PDE GRFGFNVKGG D MP++V
Sbjct: 8 IRMKPDENGRFGFNVKGGYDQKMPVIV 34
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 274 VVLINGCDVSGMHHEQVVNIIRTSRDTH-GELVLTVRPNG 312
VVLING D++ H+QVV I+ S + H GEL+L VRPN
Sbjct: 56 VVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNA 95
>pdb|2CS5|A Chain A, Solution Structure Of Pdz Domain Of Protein Tyrosine
Phosphatase, Non-Receptor Type 4
Length = 119
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 421 IRIAPDEQGRFGFNVKGGADLGMPILV 447
IR+ PDE GRFGFNVKGG D MP++V
Sbjct: 19 IRMKPDENGRFGFNVKGGYDQKMPVIV 45
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 274 VVLINGCDVSGMHHEQVVNIIRTSRDTH-GELVLTVRPN 311
VVLING D++ H+QVV I+ S + H GEL+L VRPN
Sbjct: 67 VVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 105
>pdb|3NFK|A Chain A, Crystal Structure Of The Ptpn4 Pdz Domain Complexed With
The C- Terminus Of A Rabies Virus G Protein
pdb|3NFK|B Chain B, Crystal Structure Of The Ptpn4 Pdz Domain Complexed With
The C- Terminus Of A Rabies Virus G Protein
pdb|3NFL|A Chain A, Crystal Structure Of The Ptpn4 Pdz Domain Complexed With
The C- Terminus Of The Glun2a Nmda Receptor Subunit
pdb|3NFL|B Chain B, Crystal Structure Of The Ptpn4 Pdz Domain Complexed With
The C- Terminus Of The Glun2a Nmda Receptor Subunit
pdb|3NFL|C Chain C, Crystal Structure Of The Ptpn4 Pdz Domain Complexed With
The C- Terminus Of The Glun2a Nmda Receptor Subunit
pdb|3NFL|D Chain D, Crystal Structure Of The Ptpn4 Pdz Domain Complexed With
The C- Terminus Of The Glun2a Nmda Receptor Subunit
Length = 107
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 22/27 (81%)
Query: 421 IRIAPDEQGRFGFNVKGGADLGMPILV 447
IR+ PDE GRFGFNVKGG D MP++V
Sbjct: 21 IRMKPDENGRFGFNVKGGYDQKMPVIV 47
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 274 VVLINGCDVSGMHHEQVVNIIRTSRDTH-GELVLTVRPN 311
VVLING D++ H+QVV I+ S + H GEL+L VRPN
Sbjct: 69 VVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107
>pdb|1MIX|A Chain A, Crystal Structure Of A Ferm Domain Of Talin
Length = 206
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 29/149 (19%)
Query: 7 VKFYVSDPSKLQEEYTRYHF-YLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFL 65
+KF+ SD + + + + Y+Q R DIL ++ AC A Y QC
Sbjct: 1 MKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGY--QCQI------- 51
Query: 66 SLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHKLHKG 123
+ G ++ +HKPG+L +P + ++ E KI HK
Sbjct: 52 -----------------QFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGN 94
Query: 124 QSPADAEYNYLEHAKRCEMYGVSVHGAKD 152
S +A+ Y++ A+ + YGVS K+
Sbjct: 95 MSEIEAKVRYVKLARSLKTYGVSFFLVKE 123
>pdb|1MIZ|B Chain B, Crystal Structure Of An Integrin Beta3-Talin Chimera
Length = 201
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 28/129 (21%)
Query: 26 FYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELG 85
Y+Q R DIL ++ AC A Y QC + G
Sbjct: 16 LYVQARDDILNGSHPVSFDKACEFAGY--QCQI------------------------QFG 49
Query: 86 DYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMY 143
++ +HKPG+L +P + ++ E KI HK S +A+ Y++ A+ + Y
Sbjct: 50 PHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTY 109
Query: 144 GVSVHGAKD 152
GVS K+
Sbjct: 110 GVSFFLVKE 118
>pdb|2HRJ|A Chain A, Nmr Solution Structure Of The F2 Subdomain Of Talin
Length = 121
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 29/143 (20%)
Query: 5 FRVKFYVSDPSKLQEEYTRYHF-YLQIRKDILAHRLILAPSTACLLASYTVQCNTYISEN 63
R KF+ SD + + + + Y+Q R DIL ++ AC A Y QC
Sbjct: 5 LRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGY--QCQI----- 57
Query: 64 FLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHKLH 121
+ G ++ +HKPG+L +P + ++ E KI HK
Sbjct: 58 -------------------QFGPHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNC 98
Query: 122 KGQSPADAEYNYLEHAKRCEMYG 144
S +A+ Y++ A+ + YG
Sbjct: 99 GNMSEIEAKVRYVKLARSLKTYG 121
>pdb|1MK7|B Chain B, Crystal Structure Of An Integrin Beta3-Talin Chimera
pdb|1MK7|D Chain D, Crystal Structure Of An Integrin Beta3-Talin Chimera
pdb|1MK9|B Chain B, Crystal Structure Of An Integrin Beta3-Talin Chimera
pdb|1MK9|D Chain D, Crystal Structure Of An Integrin Beta3-Talin Chimera
pdb|1MK9|F Chain F, Crystal Structure Of An Integrin Beta3-Talin Chimera
pdb|1MK9|H Chain H, Crystal Structure Of An Integrin Beta3-Talin Chimera
Length = 192
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 28/129 (21%)
Query: 26 FYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELG 85
Y+Q R DIL ++ AC A Y QC + G
Sbjct: 7 LYVQARDDILNGSHPVSFDKACEFAGY--QCQI------------------------QFG 40
Query: 86 DYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMY 143
++ +HKPG+L +P + ++ E KI HK S +A+ Y++ A+ + Y
Sbjct: 41 PHNEQKHKPGFLELKDFLPKEYIKQKGERKIFMAHKNCGNMSEIEAKVRYVKLARSLKTY 100
Query: 144 GVSVHGAKD 152
GVS K+
Sbjct: 101 GVSFFLVKE 109
>pdb|3IVF|A Chain A, Crystal Structure Of The Talin Head Ferm Domain
Length = 371
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 29/151 (19%)
Query: 5 FRVKFYVSDPSKLQEEYTRYHF-YLQIRKDILAHRLILAPSTACLLASYTVQCNTYISEN 63
R KF+ SD + + + + Y+Q R DIL ++ AC A + QC
Sbjct: 164 LRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAGF--QCQI----- 216
Query: 64 FLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHKLH 121
+ G ++ +HK G+L +P + ++ E KI + HK
Sbjct: 217 -------------------QFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNC 257
Query: 122 KGQSPADAEYNYLEHAKRCEMYGVSVHGAKD 152
S +A+ Y++ A+ + YGVS K+
Sbjct: 258 GQMSEIEAKVRYVKLARSLKTYGVSFFLVKE 288
>pdb|4F7G|A Chain A, Crystal Structure Of Talin Autoinhibition Complex
Length = 222
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 60/153 (39%), Gaps = 37/153 (24%)
Query: 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYIS 61
N YF+ DP +L Y+Q R DIL ++ AC A + QC
Sbjct: 17 NLYFQSS---RDPVQLN------LLYVQARDDILNGSHPVSFDKACEFAGF--QCQI--- 62
Query: 62 ENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHK 119
+ G ++ +HK G+L +P + ++ E KI + HK
Sbjct: 63 ---------------------QFGPHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHK 101
Query: 120 LHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKD 152
S +A+ Y++ A+ + YGVS K+
Sbjct: 102 NCGQMSEIEAKVRYVKLARSLKTYGVSFFLVKE 134
>pdb|1Y19|B Chain B, Structural Basis For Phosphatidylinositol Phosphate Kinase
Type I-Gamma Binding To Talin At Focal Adhesions
pdb|1Y19|D Chain D, Structural Basis For Phosphatidylinositol Phosphate Kinase
Type I-Gamma Binding To Talin At Focal Adhesions
pdb|1Y19|F Chain F, Structural Basis For Phosphatidylinositol Phosphate Kinase
Type I-Gamma Binding To Talin At Focal Adhesions
pdb|1Y19|H Chain H, Structural Basis For Phosphatidylinositol Phosphate Kinase
Type I-Gamma Binding To Talin At Focal Adhesions
pdb|1Y19|J Chain J, Structural Basis For Phosphatidylinositol Phosphate Kinase
Type I-Gamma Binding To Talin At Focal Adhesions
pdb|1Y19|L Chain L, Structural Basis For Phosphatidylinositol Phosphate Kinase
Type I-Gamma Binding To Talin At Focal Adhesions
Length = 202
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 28/129 (21%)
Query: 26 FYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELG 85
Y+Q R DIL ++ AC A + QC + G
Sbjct: 7 LYVQARDDILNGSHPVSFDKACEFAGF--QCQI------------------------QFG 40
Query: 86 DYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMY 143
++ +HK G+L +P + ++ E KI + HK S +A+ Y++ A+ + Y
Sbjct: 41 PHNEQKHKAGFLDLKDFLPKEYVKQKGERKIFQAHKNCGQMSEIEAKVRYVKLARSLKTY 100
Query: 144 GVSVHGAKD 152
GVS K+
Sbjct: 101 GVSFFLVKE 109
>pdb|3QDO|A Chain A, Crystal Structure Of Pdz Domain Of Sorting Nexin 27
(Snx27) Fused To The Gly-Gly Linker Followed By
C-Terminal (Eseskv) Of Girk3
Length = 109
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 246 LPPPLSLGSKFFSSGRTEYQTYQQARRSVVLINGCDVSGMHHEQVVNIIRTSRDTHGELV 305
L PL S G + ++ R ++ +NG +V G H+QVV++IR EL+
Sbjct: 40 LYAPLQHVSAVLPGGAADRAGVRKGDR-ILEVNGVNVEGATHKQVVDLIRAGEK---ELI 95
Query: 306 LTV 308
LTV
Sbjct: 96 LTV 98
>pdb|3QGL|A Chain A, Crystal Structure Of Pdz Domain Of Sorting Nexin 27
(Snx27) In Complex With The Eseskv Peptide Corresponding
To The C-Terminal Tail Of Girk3
pdb|3QGL|B Chain B, Crystal Structure Of Pdz Domain Of Sorting Nexin 27
(Snx27) In Complex With The Eseskv Peptide Corresponding
To The C-Terminal Tail Of Girk3
pdb|3QGL|C Chain C, Crystal Structure Of Pdz Domain Of Sorting Nexin 27
(Snx27) In Complex With The Eseskv Peptide Corresponding
To The C-Terminal Tail Of Girk3
pdb|3QGL|D Chain D, Crystal Structure Of Pdz Domain Of Sorting Nexin 27
(Snx27) In Complex With The Eseskv Peptide Corresponding
To The C-Terminal Tail Of Girk3
pdb|3QGL|E Chain E, Crystal Structure Of Pdz Domain Of Sorting Nexin 27
(Snx27) In Complex With The Eseskv Peptide Corresponding
To The C-Terminal Tail Of Girk3
Length = 101
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 246 LPPPLSLGSKFFSSGRTEYQTYQQARRSVVLINGCDVSGMHHEQVVNIIRTSRDTHGELV 305
L PL S G + ++ R ++ +NG +V G H+QVV++IR EL+
Sbjct: 40 LYAPLQHVSAVLPGGAADRAGVRKGDR-ILEVNGVNVEGATHKQVVDLIRAGEK---ELI 95
Query: 306 LTV 308
LTV
Sbjct: 96 LTV 98
>pdb|3QE1|A Chain A, Crystal Structure Of Pdz Domain Of Sorting Nexin 27
(Snx27) Fused To The C-Terminal Residues (Eseskv) Of
Girk3
Length = 107
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 246 LPPPLSLGSKFFSSGRTEYQTYQQARRSVVLINGCDVSGMHHEQVVNIIRTSRDTHGELV 305
L PL S G + ++ R ++ +NG +V G H+QVV++IR EL+
Sbjct: 40 LYAPLQHVSAVLPGGAADRAGVRKGDR-ILEVNGVNVEGATHKQVVDLIRAGEK---ELI 95
Query: 306 LTV 308
LTV
Sbjct: 96 LTV 98
>pdb|3K1R|A Chain A, Structure Of Harmonin Npdz1 In Complex With The Sam-Pbm Of
Sans
Length = 192
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 20/91 (21%)
Query: 228 VEHHTFFRLHSPRRSRKF-------LPPP---------LSLGSKFFSS----GRTEYQTY 267
++H + +PRRSRK L P L G F S G
Sbjct: 68 LKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSVRGGLEFGCGLFISHLIKGGQADSVG 127
Query: 268 QQARRSVVLINGCDVSGMHHEQVVNIIRTSR 298
Q +V ING +S HE+V+N+IRT +
Sbjct: 128 LQVGDEIVRINGYSISSCTHEEVINLIRTEK 158
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 103 VPGQTEEMELKIEELHKLHKGQSPADAEYNYLE--HAKRCE 141
V Q EEM+ K EEL + + Q A+AE LE H + CE
Sbjct: 852 VTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCE 892
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 103 VPGQTEEMELKIEELHKLHKGQSPADAEYNYLE--HAKRCE 141
V Q EEM+ K EEL + + Q A+AE LE H + CE
Sbjct: 852 VTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCE 892
>pdb|3G9W|A Chain A, Crystal Structure Of Talin2 F2-f3 In Complex With The
Integrin Beta1d Cytoplasmic Tail
pdb|3G9W|B Chain B, Crystal Structure Of Talin2 F2-f3 In Complex With The
Integrin Beta1d Cytoplasmic Tail
Length = 223
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 78 FSISAELGDYHPDEHKPGYLSGLSLVPGQTEEM---ELKIEELHKLHKGQSPADAEYNYL 134
F + G + +HKPG+L +P + + E +I + HK S +A+ Y+
Sbjct: 58 FQAQIQFGPHVEHKHKPGFLDLKEFLPKEYIKQRGAEKRIFQEHKNCGEMSEIEAKVKYV 117
Query: 135 EHAKRCEMYGVSVHGAKDSQDRDIQ-----LGVTANGLVIFHAGARLNLLSW 181
+ A+ YGVS K+ + LG+T + ++ + L W
Sbjct: 118 KLARSLRTYGVSFFLVKEKMKGKNKLVPRLLGITKDSVMRVDEKTKEVLQEW 169
>pdb|2KBS|A Chain A, Solution Structure Of Harmonin Pdz2 In Complex With The
Carboxyl Tail Peptide Of Cadherin23
Length = 92
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 274 VVLINGCDVSGMHHEQVVNIIRTSR 298
+V +NG D S + H++ VN++++SR
Sbjct: 51 IVEVNGVDFSNLDHKEAVNVLKSSR 75
>pdb|2VIG|A Chain A, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
pdb|2VIG|B Chain B, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
pdb|2VIG|C Chain C, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
pdb|2VIG|D Chain D, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
pdb|2VIG|E Chain E, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
pdb|2VIG|F Chain F, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
pdb|2VIG|G Chain G, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
pdb|2VIG|H Chain H, Crystal Structure Of Human Short-Chain Acyl Coa
Dehydrogenase
Length = 391
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 5/53 (9%)
Query: 337 YDNKVTSLGSREPKRAWDPPHPSDDEGGFLDKPPPGSAKLEEGEEAGPAIRTT 389
Y + GS+E K+AW P S D+ G PG+ G +AG A T
Sbjct: 95 YLGPILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGN-----GSDAGAASTTA 142
>pdb|1X5N|A Chain A, Solution Structure Of The Second Pdz Domain Of Harmonin
Protein
Length = 114
Score = 30.0 bits (66), Expect = 4.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 19/25 (76%)
Query: 274 VVLINGCDVSGMHHEQVVNIIRTSR 298
+V +NG D S + H++ VN++++SR
Sbjct: 65 IVEVNGVDFSNLDHKEAVNVLKSSR 89
>pdb|4F6L|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster
Reductase Domain
pdb|4F6L|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster
Reductase Domain
Length = 508
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 22 TRYHFYLQIRKDILAHRLI---LAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWF 78
+RY+ L I +D L+HR + L L +Y ++ S + ++ W+
Sbjct: 134 SRYN--LGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWY 191
Query: 79 SISAELGDYHPDEHKPGYLSGLSLVPGQTEEME 111
+ L DY +E LS + ++ G E M+
Sbjct: 192 KLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD 224
>pdb|4F6C|A Chain A, Crystal Structure Of Aureusimine Biosynthetic Cluster
Reductase Domain
pdb|4F6C|B Chain B, Crystal Structure Of Aureusimine Biosynthetic Cluster
Reductase Domain
Length = 427
Score = 29.3 bits (64), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Query: 22 TRYHFYLQIRKDILAHRLI---LAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWF 78
+RY+ L I +D L+HR + L L +Y ++ S + ++ W+
Sbjct: 53 SRYN--LGILEDSLSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWY 110
Query: 79 SISAELGDYHPDEHKPGYLSGLSLVPGQTE 108
+ L DY +E LS + ++ G E
Sbjct: 111 KLXTNLNDYFSEETVEXXLSNIEVIVGDFE 140
>pdb|1E6Y|C Chain C, Methyl-Coenzyme M Reductase From Methanosarcina Barkeri
pdb|1E6Y|F Chain F, Methyl-Coenzyme M Reductase From Methanosarcina Barkeri
Length = 247
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Query: 501 FERLYRKKPGLSMLHANKQENVIKN--RYRDISPYDATRVVLHEAPDGDY 548
+ER Y PG + + AN+++++ + R+IS D T V+ H AP DY
Sbjct: 2 YERQY--YPGATSVAANRRKHMSGKLEKLREISDEDLTAVLGHRAPGSDY 49
>pdb|2VRF|A Chain A, Crystal Structure Of The Human Beta-2-Syntrophin Pdz
Domain
pdb|2VRF|B Chain B, Crystal Structure Of The Human Beta-2-Syntrophin Pdz
Domain
pdb|2VRF|C Chain C, Crystal Structure Of The Human Beta-2-Syntrophin Pdz
Domain
pdb|2VRF|D Chain D, Crystal Structure Of The Human Beta-2-Syntrophin Pdz
Domain
Length = 95
Score = 28.9 bits (63), Expect = 9.8, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 421 IRIAPDEQGRFGFNVKGGADLGMPILV 447
+R+ E G G ++KGG + MPIL+
Sbjct: 7 VRVVKQEAGGLGISIKGGRENRMPILI 33
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,075,177
Number of Sequences: 62578
Number of extensions: 856085
Number of successful extensions: 2050
Number of sequences better than 100.0: 147
Number of HSP's better than 100.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1582
Number of HSP's gapped (non-prelim): 164
length of query: 702
length of database: 14,973,337
effective HSP length: 106
effective length of query: 596
effective length of database: 8,340,069
effective search space: 4970681124
effective search space used: 4970681124
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)