Query psy17835
Match_columns 702
No_of_seqs 469 out of 2291
Neff 6.5
Searched_HMMs 46136
Date Sat Aug 17 00:12:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17835.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17835hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0792|consensus 100.0 1E-116 2E-121 1003.9 42.6 659 1-702 96-1072(1144)
2 KOG3530|consensus 100.0 1.2E-65 2.7E-70 559.5 21.3 243 2-270 83-327 (616)
3 KOG3527|consensus 100.0 1.8E-57 3.8E-62 509.7 14.2 255 2-294 103-357 (975)
4 PHA02742 protein tyrosine phos 100.0 2.6E-50 5.6E-55 429.5 22.5 201 494-702 25-238 (303)
5 PHA02747 protein tyrosine phos 100.0 1.2E-49 2.5E-54 425.9 22.1 201 494-702 24-238 (312)
6 PHA02740 protein tyrosine phos 100.0 6.5E-49 1.4E-53 416.8 22.1 195 494-702 24-230 (298)
7 PHA02746 protein tyrosine phos 100.0 1.3E-48 2.9E-53 419.5 23.3 200 494-702 24-256 (323)
8 PHA02738 hypothetical protein; 100.0 6.8E-48 1.5E-52 413.5 21.1 198 494-702 24-236 (320)
9 KOG0790|consensus 100.0 6.6E-49 1.4E-53 414.1 9.2 206 493-702 242-460 (600)
10 smart00194 PTPc Protein tyrosi 100.0 3.9E-46 8.4E-51 388.8 23.2 198 497-702 2-202 (258)
11 KOG4228|consensus 100.0 1.5E-46 3.3E-51 434.9 15.1 197 494-702 540-739 (1087)
12 KOG0793|consensus 100.0 7.7E-43 1.7E-47 382.6 9.8 203 493-702 730-936 (1004)
13 cd00047 PTPc Protein tyrosine 100.0 6.1E-41 1.3E-45 343.8 20.8 172 523-702 1-175 (231)
14 KOG0791|consensus 100.0 1.7E-41 3.7E-46 355.1 15.7 200 493-702 94-296 (374)
15 PF00102 Y_phosphatase: Protei 100.0 1.8E-38 3.8E-43 323.7 19.6 174 521-702 1-179 (235)
16 COG5599 PTP2 Protein tyrosine 100.0 6.8E-38 1.5E-42 314.6 14.7 180 512-702 44-227 (302)
17 KOG3531|consensus 100.0 2.1E-38 4.6E-43 353.9 -0.8 243 2-274 112-355 (1036)
18 KOG4228|consensus 100.0 1.8E-36 3.9E-41 351.5 14.1 199 493-702 824-1027(1087)
19 PRK15375 pathogenicity island 100.0 6.6E-34 1.4E-38 310.8 17.6 165 524-702 301-475 (535)
20 KOG0789|consensus 100.0 2.4E-33 5.2E-38 311.0 17.8 202 495-702 102-308 (415)
21 KOG3529|consensus 100.0 6.3E-29 1.4E-33 281.7 8.3 207 2-238 86-304 (596)
22 cd00836 FERM_C FERM_C domain. 99.9 4.5E-24 9.7E-29 188.8 10.8 92 142-235 1-92 (92)
23 PF00373 FERM_M: FERM central 99.9 1.7E-21 3.7E-26 180.6 11.4 110 13-148 1-126 (126)
24 PF09380 FERM_C: FERM C-termin 99.8 1.1E-19 2.4E-24 160.0 8.8 86 152-240 1-88 (90)
25 smart00295 B41 Band 4.1 homolo 99.8 2.6E-19 5.6E-24 179.6 10.4 121 2-148 77-207 (207)
26 KOG4371|consensus 99.7 5.6E-18 1.2E-22 194.2 11.0 267 2-298 589-888 (1332)
27 KOG4261|consensus 99.2 1E-12 2.2E-17 147.9 -0.1 171 3-200 190-370 (1003)
28 KOG0248|consensus 99.1 1.1E-10 2.3E-15 130.5 5.9 184 14-224 687-889 (936)
29 KOG4371|consensus 98.9 4E-10 8.6E-15 130.8 2.0 215 2-234 117-393 (1332)
30 KOG3531|consensus 98.6 1E-08 2.2E-13 117.4 0.6 166 3-196 252-418 (1036)
31 smart00012 PTPc_DSPc Protein t 98.4 2.7E-07 5.9E-12 81.8 5.8 46 657-702 1-48 (105)
32 smart00404 PTPc_motif Protein 98.4 2.7E-07 5.9E-12 81.8 5.8 46 657-702 1-48 (105)
33 PF08736 FA: FERM adjacent (FA 98.0 5.3E-06 1.2E-10 64.1 3.2 36 249-294 3-38 (47)
34 KOG3552|consensus 97.8 3.4E-05 7.3E-10 89.9 6.1 140 4-168 264-428 (1298)
35 PTZ00242 protein tyrosine phos 97.6 0.00011 2.3E-09 72.4 5.6 34 565-598 16-49 (166)
36 KOG3527|consensus 97.1 0.0001 2.2E-09 85.9 0.0 233 5-265 459-699 (975)
37 KOG4257|consensus 96.9 0.0021 4.6E-08 73.4 7.6 205 2-235 93-324 (974)
38 KOG3727|consensus 96.6 0.0043 9.3E-08 69.7 7.2 105 107-217 516-625 (664)
39 cd00435 ACBP Acyl CoA binding 95.9 0.046 1E-06 47.8 8.6 80 27-144 5-85 (85)
40 PTZ00393 protein tyrosine phos 95.8 0.019 4.1E-07 59.4 6.7 34 565-598 92-125 (241)
41 PF00887 ACBP: Acyl CoA bindin 95.3 0.056 1.2E-06 47.3 6.8 64 39-140 19-82 (87)
42 cd00127 DSPc Dual specificity 93.1 0.1 2.3E-06 48.6 4.1 42 657-702 49-90 (139)
43 KOG3550|consensus 91.7 0.19 4E-06 48.0 3.7 34 424-457 96-131 (207)
44 PTZ00458 acyl CoA binding prot 91.2 1.5 3.2E-05 38.9 8.7 63 40-140 20-82 (90)
45 KOG3784|consensus 90.6 1.5 3.2E-05 48.3 9.7 102 17-190 206-315 (407)
46 COG4281 ACB Acyl-CoA-binding p 90.2 1.1 2.5E-05 38.0 6.6 78 26-141 5-82 (87)
47 KOG3549|consensus 84.0 0.9 1.9E-05 49.0 3.3 38 417-454 54-91 (505)
48 KOG2836|consensus 83.2 5.1 0.00011 38.0 7.4 35 565-599 17-51 (173)
49 KOG3551|consensus 73.6 1.7 3.7E-05 47.6 1.5 54 420-473 87-142 (506)
50 smart00195 DSPc Dual specifici 73.5 6.2 0.00013 36.8 5.2 17 582-598 19-35 (138)
51 KOG0817|consensus 73.3 11 0.00025 36.2 6.9 68 41-146 23-91 (142)
52 PF00595 PDZ: PDZ domain (Also 73.1 1.7 3.7E-05 36.8 1.2 49 421-470 2-53 (81)
53 COG2453 CDC14 Predicted protei 70.0 6.2 0.00013 39.2 4.5 40 661-702 75-114 (180)
54 PF02174 IRS: PTB domain (IRS- 63.4 62 0.0014 29.0 9.2 61 156-217 22-84 (100)
55 PF03162 Y_phosphatase2: Tyros 60.4 9.7 0.00021 37.4 3.7 36 663-701 64-99 (164)
56 cd01203 DOK_PTB Downstream of 60.2 70 0.0015 29.2 8.7 72 157-229 22-95 (104)
57 PF05706 CDKN3: Cyclin-depende 58.6 14 0.00031 36.5 4.4 111 547-702 25-142 (168)
58 cd01217 CG12581 CG12581 Phosph 55.8 64 0.0014 31.2 8.1 78 152-230 39-152 (158)
59 KOG3553|consensus 55.1 9.9 0.00022 34.2 2.5 45 430-474 36-91 (124)
60 KOG1720|consensus 54.7 16 0.00036 37.3 4.3 34 666-702 123-156 (225)
61 cd00934 PTB Phosphotyrosine-bi 53.9 1.6E+02 0.0036 26.3 10.6 71 152-225 38-113 (123)
62 cd00992 PDZ_signaling PDZ doma 52.6 20 0.00044 29.8 4.0 49 421-470 4-54 (82)
63 PF14470 bPH_3: Bacterial PH d 50.3 1.3E+02 0.0029 25.8 9.0 68 154-228 20-95 (96)
64 PF14317 YcxB: YcxB-like prote 50.2 34 0.00073 26.7 4.7 37 162-199 1-37 (62)
65 PF00782 DSPc: Dual specificit 48.6 22 0.00048 32.7 3.9 26 673-702 57-82 (133)
66 KOG3209|consensus 47.1 26 0.00056 41.6 4.8 54 416-470 897-952 (984)
67 KOG4335|consensus 44.0 8.7 0.00019 43.7 0.5 66 14-106 214-286 (558)
68 PF04273 DUF442: Putative phos 42.9 28 0.00062 31.9 3.6 20 582-601 20-39 (110)
69 cd00824 PTBI IRS-like phosphot 41.1 1.5E+02 0.0032 27.1 7.8 68 156-224 21-91 (104)
70 PF00640 PID: Phosphotyrosine 38.7 1.9E+02 0.0042 26.6 8.7 64 152-216 48-117 (140)
71 PF10480 ICAP-1_inte_bdg: Beta 37.0 2.4E+02 0.0053 28.5 9.1 93 129-228 87-188 (200)
72 PF10727 Rossmann-like: Rossma 36.9 31 0.00068 32.5 3.0 30 671-702 76-105 (127)
73 PF13350 Y_phosphatase3: Tyros 36.6 32 0.0007 33.3 3.1 37 567-604 21-57 (164)
74 PF14566 PTPlike_phytase: Inos 35.6 37 0.0008 32.7 3.3 34 666-702 100-133 (149)
75 COG5350 Predicted protein tyro 35.0 60 0.0013 31.8 4.5 41 660-702 61-102 (172)
76 PRK12361 hypothetical protein; 33.7 58 0.0012 38.1 5.1 34 667-702 151-184 (547)
77 KOG4335|consensus 33.6 12 0.00026 42.7 -0.5 133 16-175 343-497 (558)
78 TIGR01244 conserved hypothetic 31.0 67 0.0014 30.3 4.2 19 583-601 21-39 (135)
79 smart00462 PTB Phosphotyrosine 27.8 3.7E+02 0.008 24.5 8.7 75 152-227 40-121 (134)
80 KOG4471|consensus 26.4 41 0.00089 39.3 2.1 40 190-233 98-137 (717)
81 KOG2283|consensus 25.9 75 0.0016 36.2 4.1 38 664-702 78-116 (434)
82 smart00310 PTBI Phosphotyrosin 23.1 5E+02 0.011 23.5 8.0 67 157-227 21-89 (98)
83 PF02061 Lambda_CIII: Lambda P 22.8 1.1E+02 0.0023 23.2 3.0 25 660-684 2-26 (45)
84 PF10756 bPH_6: Bacterial PH d 22.2 1.3E+02 0.0028 25.1 3.9 38 159-197 3-40 (73)
85 KOG3878|consensus 20.8 2.6E+02 0.0056 30.7 6.5 67 37-139 49-116 (469)
86 cd05860 Ig4_SCFR Fourth immuno 20.3 49 0.0011 30.0 1.0 25 416-440 65-89 (101)
No 1
>KOG0792|consensus
Probab=100.00 E-value=1e-116 Score=1003.87 Aligned_cols=659 Identities=41% Similarity=0.601 Sum_probs=503.0
Q ss_pred CcEEEEEEEeeCCCCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhccccccccc
Q psy17835 1 GNFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSI 80 (702)
Q Consensus 1 ~~l~FrVKFyv~~p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (702)
|.|+|||||||+||+.|+||.|||+||||+|+||++|||+|+.++|++||+|++|
T Consensus 96 p~l~frV~fyV~~p~~LqeE~TRyqyylQvK~di~eGrl~Ct~~qailLA~yavQ------------------------- 150 (1144)
T KOG0792|consen 96 PLLHFRVKFYVPDPSGLQEEATRYQYYLQVKKDILEGRLPCTLNQAILLASYAVQ------------------------- 150 (1144)
T ss_pred ceEEEEEEEEecChhHHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHhhhh-------------------------
Confidence 5799999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCC--CCCCCcCCCCCcH----HHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeecCC
Q psy17835 81 SAELGDYHPDEHKPG--YLSGLSLVPGQTE----EMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQ 154 (702)
Q Consensus 81 ~ae~GDy~~~~~~~~--yl~~~~~~P~~~~----~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd~~ 154 (702)
||+|||+..++... |+..+.+.+.+.+ +++++|+++|++|+|++++|||++||++|++|++||+++|.+||..
T Consensus 151 -ae~gdy~~~~s~~~l~~~~~~p~~~~~~~n~~~e~~~kVa~lhQ~h~G~~~~eAE~~yi~~~~rlegyG~e~~~akD~~ 229 (1144)
T KOG0792|consen 151 -AEFGDYNQKQSQDGLEYLSVFPQCTLQDENVLEEFEQKVAELHQQHRGLLPAEAETNYINEAKRLEGYGEEFHRAKDLH 229 (1144)
T ss_pred -hhhcchhhhcCCccchhccccccccccchhhHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHhhccccceecccccCC
Confidence 99999998777665 6666666666766 9999999999999999999999999999999999999999999999
Q ss_pred CCceEEeecCCcEEEee-CCeeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhhcccc
Q psy17835 155 DRDIQLGVTANGLVIFH-AGARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTF 233 (702)
Q Consensus 155 ~~~i~LGV~~~GI~v~~-~~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve~H~F 233 (702)
|.+|.|||+..||.|++ ++.+.+.|+|.+|.+++|+++.|.|+++++..+..++.+.|.|.+.+.||+|||+|+++|+|
T Consensus 230 g~~i~lGi~~~Gi~V~~~~g~~~~~~~W~di~~is~~ks~~~le~~~~~~~~r~t~~~F~~~~~~~ak~lwk~cv~~H~F 309 (1144)
T KOG0792|consen 230 GNDINLGIARVGILVPGQNGRQSVKFPWGDIIKISFKKSTFGLEQRNKDSESRETLLGFNMLDARTAKYLWKLCVEHHKF 309 (1144)
T ss_pred CcceeeeeeeceeEeeccCccccceechhhhhhhhcchhhhhhhhhhccccchhhhheeeecccchhHHHHHHHHHHhhH
Confidence 99999999999999998 67778899999999999999999999999888888999999999999999999999999999
Q ss_pred ccccCCCcCCCCC-----CCCCCCCCcccccccchHHHHHHHHhhhee-ccccCCCCC---ccceeeeecccccCCCCcc
Q psy17835 234 FRLHSPRRSRKFL-----PPPLSLGSKFFSSGRTEYQTYQQARRSVVL-INGCDVSGM---HHEQVVNIIRTSRDTHGEL 304 (702)
Q Consensus 234 fr~~~~~~~~~~~-----~~~~~~gs~f~y~grT~~q~~~~~~r~~~~-~~g~~~~~~---~~~~~~~~~~~s~~~~~~~ 304 (702)
||+.++...+... ...++.++.|++.++++.+..+..+++... ..|+.-..+ ..+....++++|.| .
T Consensus 310 fr~~~~~~lp~~~~~~~~~~~~~~ss~~~~~~y~~~~~~~~~~~~hys~~~~s~qd~l~~~~~~~s~~~~~tsld----~ 385 (1144)
T KOG0792|consen 310 FRLKKPCVLPSSSKSPIRRVQSSRSSLPEMQDYSEPQCKEPSRRDHYSESHGSGQDDLFTANANSSNSTSSTSLD----N 385 (1144)
T ss_pred hhccccccCCcccCCCcccccccccccccccccccccccchhhcccccccccccchhhhcccccccccccchhhh----h
Confidence 9999864433311 125677888999999998877765554432 112111111 11222223333333 2
Q ss_pred ceeecCCCcccccccccccc----------------CCCCC---CC--------cc------c--------------ccc
Q psy17835 305 VLTVRPNGKSRSTQRSIQIS----------------SDDNA---KS--------SR------S--------------LRY 337 (702)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~----------------~~~~~---~~--------~~------~--------------~~~ 337 (702)
..+...+ +.+++.+|..++ +++.+ +| +| + ..+
T Consensus 386 m~gq~~s-~~~~s~~s~~s~~~~~~~~qa~~~~~n~~~~~~~~m~pdy~pa~~~sp~~~~~yr~~~~~~~~~~i~~~~~q 464 (1144)
T KOG0792|consen 386 MNGQAQS-GHVASLGSKNSLNCMRTYLQAVPNSKNFEDSGSDAMRPDYAPAPRYSPQSPLAYRPTVMKQLIRGIPHPDRQ 464 (1144)
T ss_pred hhccccc-ccccccCccccccccccccccCCCCCccccccccccCcccccccccccccccccCchhhHHhhhcCcchhhc
Confidence 2222212 344433332221 00000 00 11 1 112
Q ss_pred CCccccCCCCC---------------------CCCCC------CCCCCC------CC-----------------------
Q psy17835 338 DNKVTSLGSRE---------------------PKRAW------DPPHPS------DD----------------------- 361 (702)
Q Consensus 338 ~~~~~~~~~~~---------------------~~~~~------~~~~~~------~~----------------------- 361 (702)
.+|.+++++.. +.+++ .+++|. +.
T Consensus 465 ~~s~~~ln~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~p~~~~Pi~~~~~~~~~~~~~~~~~~~~ss 544 (1144)
T KOG0792|consen 465 SNSKRLLNDGGNHAESLPLEIREEHGYPGPAVPKGNQSLYVHDVSRSPAKSPGPRSPIKVNVSDPELMNHQLQNLNRASS 544 (1144)
T ss_pred cccccccccccccccccchhhhhcccCCCccccccccceecccccCCCCCCCCCCCCccccccchhhhcccchhhccccc
Confidence 25666666411 11111 011221 00
Q ss_pred ----CCCCCC-CCCCCCcc------cc--------------------cCccCCCCCcccCC----------------C--
Q psy17835 362 ----EGGFLD-KPPPGSAK------LE--------------------EGEEAGPAIRTTEP----------------G-- 392 (702)
Q Consensus 362 ----~~~~~~-~p~~~~~~------~~--------------------~~~~~~~~~~~~~~----------------~-- 392 (702)
...+++ +|++.|++ +. -.++| +++.++.. +
T Consensus 545 ~~~~~~~~r~~~~~~~P~~ags~PDl~r~~~~sg~s~~~~~~~~~~sv~t~q-~ds~~~a~~~~~~~~~~~ie~~~mS~~ 623 (1144)
T KOG0792|consen 545 KTVRLVIFRPPPPYPRPRSAGSLPDLTRHKYKSGSSPDLVTDGVYQSVQTSQ-EDSMPVAAQELTLQKLNSIEVVNMSPG 623 (1144)
T ss_pred ccccceeecCCCCCCCCCCCCCCcchhhhhcccCCCcccccccccccccccC-CCcchhhhhhhhhccccceeeeccchh
Confidence 002222 33333322 10 01222 11111100 0
Q ss_pred ---------------------CCCc----CCcccccc----------c--------------cccCcccccCCCEEEEEc
Q psy17835 393 ---------------------PAAI----LPARTTLN----------F--------------VDDDVEEDLEEGLVLIRI 423 (702)
Q Consensus 393 ---------------------~~~~----~~~~~~~~----------~--------------~~~~~~~~~~~~~~~~~~ 423 (702)
.|.+ .+..++.+ + ..+.++.-.+..++.|++
T Consensus 624 ~e~~~~~~~als~v~~~ts~~lpp~~~~q~~~p~s~~~~~~~~~~~~~~~at~l~ss~~a~~~e~~~~~S~~~~~v~ir~ 703 (1144)
T KOG0792|consen 624 LETLIEKNRALSAVPKATSRGLPPSVRSQVSGPHSTPGNGSYGSKSPFSDATMLGSSSEAVEEEEINEESSKPQLVPIRA 703 (1144)
T ss_pred hhhhhhccchhhhcCcccccCCCCCcccccCCCCCCCCccccccccccccccCCCCccccccccccccccCCCcceeecc
Confidence 0000 00001111 0 011222222355999999
Q ss_pred CCCC-------CCCCccccCCCCCCC-----CceEEEeee-------------cCC--CCCcc--------ccc------
Q psy17835 424 APDE-------QGRFGFNVKGGADLG-----MPILVVRGR-------------RRG--GRGAP--------LPI------ 462 (702)
Q Consensus 424 ~~~~-------~g~~~f~~~g~~~~~-----~~~~vs~~~-------------~~~--~~~~p--------~~i------ 462 (702)
+||+ .|+||||+|||.||. +|++|+||+ |++ |+|.| ++|
T Consensus 704 ~pd~~~~~~~~~g~~g~~~~g~~dq~~~~~~~p~a~sRv~~~~p~~~~~~~~~p~s~~d~~~P~~~e~dq~~~ingr~~~ 783 (1144)
T KOG0792|consen 704 RPDESYLAEDPPGRFGFNLKGGLDQLQNLLNEPVAVSRVAGPGPLKMNGKLSEPESTADDCTPRLNEGDQVTSINGRDVS 783 (1144)
T ss_pred CCcccccccCCCccccccccchhhhhhccccccHHHHhhcccccchhcccccCCCCCccccccCCCcccceeeecccccc
Confidence 9999 999999999999999 999999999 887 89999 234
Q ss_pred ---ccceeeccCCcccccccCCC-------------------------------CCCCC-----CCCC------------
Q psy17835 463 ---RTRVFTSRGGLNARQCRGPV-------------------------------PVDAP-----VGGW------------ 491 (702)
Q Consensus 463 ---~~~~~~~~~~~~i~~~~~~~-------------------------------p~~~~-----~~~~------------ 491 (702)
|+++| +||++.++++ |++.. +++.
T Consensus 784 ~~~~~~~v-----s~irs~r~~~~s~e~~l~~~~~~~~~~~~~e~~~~~~~~l~~~~la~~~~~~~~~~~~~r~~~dks~ 858 (1144)
T KOG0792|consen 784 ESEHDQVV-----SLIRSPRENITSGELMLTGRPNAPRERLKAEDSDEPLSQLVPESLAVDSVVEELDSGATRASLDKSC 858 (1144)
T ss_pred cccccchH-----HHHhhhhhccccccccccCCccccchhhhccccCCchhhhCCccccccCccccCcccccccchhhHH
Confidence 99999 9999999831 11100 1111
Q ss_pred ------cchHHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccCCCC--CCceEeeeecccCCCCCc
Q psy17835 492 ------TGEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPD--GDYINANTVAMEIPGSGI 563 (702)
Q Consensus 492 ------~g~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~~~--~dYINAsyI~~~i~g~~~ 563 (702)
+.+++++.|||+|+++++++.+++|++++|..||||+||+|||.|||.|.+..+ ..|||||+|. ||-.+.
T Consensus 859 ~~L~~~L~~g~v~~efE~i~rkkp~~~~~~a~lpeN~~KNRyrdvlPYD~tRV~L~~~~~~nagYINAS~i~--ipvgg~ 936 (1144)
T KOG0792|consen 859 IILAQGLEDGMVFTEFEQIYRKKPGMACSIARLPENAPKNRYRDVLPYDDTRVELQPSKDNNAGYINASHIE--IPVGGI 936 (1144)
T ss_pred HHHHhhhhcCchHHHHHHHhhhCCCceeeeccccccccccccCCcCCCcCceeeeccCCCCCcccccceeeE--eeecce
Confidence 147889999999999999999999999999999999999999999999998643 4899999987 555567
Q ss_pred ccceeeecCCCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCC-CCeeEecCceEEEEEeeeeecCCCCEEE
Q psy17835 564 VNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSL-GETLELSGGRFNISCAKEEADPSGSFVF 642 (702)
Q Consensus 564 ~~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~-g~~~~~g~g~~~V~~~~~~~~~~~~y~~ 642 (702)
.+.||||||||++||.|||+||||+++.+|||||+..|+|+.||+||||.. .++++||. |.|+|..+..... |++
T Consensus 937 e~~YIA~QGPLp~T~~DFWQMVWEQ~~~lIvMlT~e~EggR~KchqYWPr~~~~t~~ygr--f~v~~~~~~~t~~--y~t 1012 (1144)
T KOG0792|consen 937 ENRYIACQGPLPHTCTDFWQMVWEQGSTLIVMLTTEVEGGRVKCHQYWPRLGHETMEYGR--FQVTCVFEQQTTC--YVT 1012 (1144)
T ss_pred eEEEEEecCCCcchHHHHHHHHHhcCceEEEEEeehhhcCeeccccccCCCCccceeccc--eEEEEEEeccccc--EEE
Confidence 899999999999999999999999999999999999999999999999987 67888988 9999999877766 999
Q ss_pred EEEEEEECCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 643 REFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 643 R~L~I~~~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
|+|+|.+..++++|+|||+||++|||||+|+++.+||+|+++|+..+.+.+.||||||||
T Consensus 1013 r~m~l~~~~t~eeR~V~hLQYtaWPDHg~P~D~~~FL~FleevrsvR~~t~pPilvHCSA 1072 (1144)
T KOG0792|consen 1013 REMTLKDLQTREERTVWHLQYTAWPDHGVPDDPNDFLDFLEEVRSVRRGTNPPILVHCSA 1072 (1144)
T ss_pred EeEEEeeccCCceeeeeeeeecccccCCCCCChHHHHHHHHHHHHHhccCCCCeEEEccC
Confidence 999999999999999999999999999999999999999999999998878899999998
No 2
>KOG3530|consensus
Probab=100.00 E-value=1.2e-65 Score=559.49 Aligned_cols=243 Identities=44% Similarity=0.758 Sum_probs=230.7
Q ss_pred cEEEEEEEeeCCCCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccc
Q psy17835 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSIS 81 (702)
Q Consensus 2 ~l~FrVKFyv~~p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (702)
+|+||||||+.||..|.||.||||||||||+|||+|||+|+.++|++||||+||
T Consensus 83 tL~~rVKfY~sdP~~Lree~tRYqfflQlKqDll~GRL~Cp~~~AaeLaAl~lQ-------------------------- 136 (616)
T KOG3530|consen 83 TLHLRVKFYPSDPNNLREENTRYQFFLQLKQDLLSGRLYCPFETAAELAALILQ-------------------------- 136 (616)
T ss_pred EEEEEEEeccCChhhhhchhhHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHH--------------------------
Confidence 699999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeecCCCCceEEe
Q psy17835 82 AELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLG 161 (702)
Q Consensus 82 ae~GDy~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd~~~~~i~LG 161 (702)
+|||||++++|.++|+++++|+|+|++++|.+|.++||+++|++|++||++||+.|+.||||||++|.|++.+|.+..||
T Consensus 137 sELGDYn~~~Ht~~yVSefRf~p~Qte~LE~~I~e~hK~~rGqspaqAElnyLnkAkwLemYGVDmH~V~g~dg~ey~LG 216 (616)
T KOG3530|consen 137 SELGDYNEEEHTGGYVSEFRFLPNQTEELEERIFELHKELRGQSPAQAELNYLNKAKWLEMYGVDMHPVKGHDGSEYYLG 216 (616)
T ss_pred HHhcCCChhhccccceeeeEecccccHHHHHHHHHHHHHhcCCCHHHHHHHHHhhhhhhhhccccceeeecCCCceeEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcEEEeeCCeeeeeeccccccceEEeccEEEEEEccCC--CCCCcceEEEEecChHHHHHHHHHHhhccccccccCC
Q psy17835 162 VTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFVQLKREP--SENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFRLHSP 239 (702)
Q Consensus 162 V~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I~~~~~~--~~~~~~~~~F~~~~~~~ak~Lw~~~ve~H~Ffr~~~~ 239 (702)
+++.||.||.+..++..|.|++|.|+.|++|+|++++..+. ....+++++|.+++.++||+|||||||||+|||+..|
T Consensus 217 LTptGIlvf~g~~kig~f~WpkI~KvdFk~kk~~L~v~edd~~~~~q~hTf~F~~~~~~AcKhLWKCavEhhaFFRl~~p 296 (616)
T KOG3530|consen 217 LTPTGILVFEGKKKIGLFFWPKITKVDFKGKKFTLVVSEDDDQGREQEHTFVFRLPSPKACKHLWKCAVEHHAFFRLRCP 296 (616)
T ss_pred ccCceEEEEECCceeeEEecchheEeeccCcEEEEEEeeccccCCcccceEEEeCCCcchhHHHHHHhhhccceEeccCC
Confidence 99999999999999999999999999999999999997542 2235689999999999999999999999999999998
Q ss_pred CcCCCCCCCCCCCCCcccccccchHHHHHHH
Q psy17835 240 RRSRKFLPPPLSLGSKFFSSGRTEYQTYQQA 270 (702)
Q Consensus 240 ~~~~~~~~~~~~~gs~f~y~grT~~q~~~~~ 270 (702)
...+.....++++||||||+|||++|+....
T Consensus 297 ~~~~s~~~~ffrlGSrfRysgrTe~q~~~~~ 327 (616)
T KOG3530|consen 297 VSSQSARSDFFRLGSRFRYSGRTEYQTTKLS 327 (616)
T ss_pred ccccccccchhhhcceeeecCchHHHhhhhh
Confidence 7655544578999999999999999977654
No 3
>KOG3527|consensus
Probab=100.00 E-value=1.8e-57 Score=509.73 Aligned_cols=255 Identities=49% Similarity=0.791 Sum_probs=244.3
Q ss_pred cEEEEEEEeeCCCCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccc
Q psy17835 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSIS 81 (702)
Q Consensus 2 ~l~FrVKFyv~~p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (702)
+|.|.||||+|||++|.+++|||++|||+|.||++|||||+.-+.++|++|.+|
T Consensus 103 ~f~f~vKfyPp~Psql~EditrY~lcLq~R~Dil~GrlPcsfvt~allgsy~vq-------------------------- 156 (975)
T KOG3527|consen 103 NFTFNVKFYPPDPSQLTEDITRYYLCLQLRQDILSGRLPCSFVTHALLGSYTVQ-------------------------- 156 (975)
T ss_pred ceeEeeeeCCCChHhccccchhheehhhhhhhhhcCccccchhhhhhhhhHhHH--------------------------
Confidence 589999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeecCCCCceEEe
Q psy17835 82 AELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLG 161 (702)
Q Consensus 82 ae~GDy~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd~~~~~i~LG 161 (702)
+|+|||++++|..+|++++.+.|+|+.+++.+|++||+.|+||+|++|++.||+.|++|.||||++|++||++|++|+||
T Consensus 157 ~E~gdYd~ee~~~~y~~df~~aPnqt~eledkv~eLhkt~rg~~pa~A~ih~lenakkl~mYgvDlh~aKdsegvdi~lg 236 (975)
T KOG3527|consen 157 SELGDYDPEEHGSDYLSDFKFAPNQTKELEDKVMELHKTHRGMTPAEAEIHFLENAKKLSMYGVDLHHAKDSEGVDIMLG 236 (975)
T ss_pred hHhccCCHHHcccchhhhhccCcchhhhHHHHHHHHHhhhcCCChhHhHHHHHHhhhhhhhcccccccccccccceeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcEEEeeCCeeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhhccccccccCCCc
Q psy17835 162 VTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFRLHSPRR 241 (702)
Q Consensus 162 V~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve~H~Ffr~~~~~~ 241 (702)
||++|+.||++..+|+.|.|++|.||+|+|..|+|++++...+..+.+++|+++++++||.||+.|+|||+|||+..|..
T Consensus 237 vca~glliy~d~lrinrfawPKilKisykR~~FyiKirPge~eq~EstigFklpnhraakrlwk~cvEHhtffrl~~Pe~ 316 (975)
T KOG3527|consen 237 VCASGLLIYRDRLRINRFAWPKILKISYKRSNFYIKIRPGEFEQFESTIGFKLPNHRAAKRLWKVCVEHHTFFRLVSPEP 316 (975)
T ss_pred ccccceEEeechhhhccccCchhhhhccceeeeEEEecCCccccccccccccccchhhHHhhhHhhhhccceeeeccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCcccccccchHHHHHHHHhhheeccccCCCCCccceeeeec
Q psy17835 242 SRKFLPPPLSLGSKFFSSGRTEYQTYQQARRSVVLINGCDVSGMHHEQVVNII 294 (702)
Q Consensus 242 ~~~~~~~~~~~gs~f~y~grT~~q~~~~~~r~~~~~~g~~~~~~~~~~~~~~~ 294 (702)
.++. .++.+||+|||+|||++|+++.+.. +.| ..+.|.|++
T Consensus 317 ~pk~--~f~~~gs~~rysgrtqa~trqAsal---iDR-------paP~FERSs 357 (975)
T KOG3527|consen 317 PPKS--KFLVLGSKFRYSGRTQAQTRQASAL---IDR-------PAPFFERSS 357 (975)
T ss_pred Cccc--cccccccceeecccchhhhhhhccc---ccC-------Ccccccccc
Confidence 8886 3789999999999999999886433 333 667888866
No 4
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=2.6e-50 Score=429.51 Aligned_cols=201 Identities=31% Similarity=0.550 Sum_probs=182.0
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccCCC-CCCceEeeeecccCCCCCcccceeeecC
Q psy17835 494 EWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAP-DGDYINANTVAMEIPGSGIVNRYIATQG 572 (702)
Q Consensus 494 ~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~~-~~dYINAsyI~~~i~g~~~~~~yIaTQ~ 572 (702)
...+.+||++|.+.....++..+..++|..||||.||+|||+|||+|+..+ ++||||||||+ |+...++||||||
T Consensus 25 ~~~i~~E~~~i~~~~~~~~~~~~~~~~N~~KNRy~~i~~~D~tRV~L~~~~~~~dYINAsyI~----g~~~~~~fIatQ~ 100 (303)
T PHA02742 25 AEILKEEHEHIMQEIVAFSCNESLELKNMKKCRYPDAPCFDRNRVILKIEDGGDDFINASYVD----GHNAKGRFICTQA 100 (303)
T ss_pred HHHHHHHHHHHhcCCCCCchhhccChhhhhcCCCCCCCCCCCCEEEeCCCCCCCCcEEEeeec----CCCCCCeEEEECC
Confidence 456888999998887778999999999999999999999999999998643 47999999998 8887899999999
Q ss_pred CCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCC-CCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEECC
Q psy17835 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS-LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQ 651 (702)
Q Consensus 573 Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~-~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~~ 651 (702)
|+++|+.|||+||||++|.+|||||.+.|.|++||++|||. +++...||+ |+|++.+++.... |++|+|.|++..
T Consensus 101 Pl~~T~~dFW~MVw~~~~~vIVmLt~~~E~g~~kc~~YWp~~~~~~~~~g~--~~V~~~~~~~~~~--~~~~~l~l~~~~ 176 (303)
T PHA02742 101 PLEETALDFWQAIFQDQVRVIVMITKIMEDGKEACYPYWMPHERGKATHGE--FKIKTKKIKSFRN--YAVTNLCLTDTN 176 (303)
T ss_pred CCcccHHHHHHHHhhcCCCeEEEcchhhhCCeeeccccCCCCCCCceEEEE--EEEEEEEEEEcCC--EEEEEEEEEECC
Confidence 99999999999999999999999999999999999999986 567788988 9999998877655 999999999988
Q ss_pred CCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcC-----------CCCCcEEEEcCC
Q psy17835 652 TGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA-----------GMVEPAIVHCSA 702 (702)
Q Consensus 652 ~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~-----------~~~~PIVVHCSA 702 (702)
++++|.|+||||++|||+|+|.++..||+|+..|+..+. ...+||||||||
T Consensus 177 ~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~~PIvVHCsa 238 (303)
T PHA02742 177 TGASLDIKHFAYEDWPHGGLPRDPNKFLDFVLAVREADLKADVDIKGENIVKEPPILVHCSA 238 (303)
T ss_pred CCceEEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHhhhccccccccccCCCCCeEEECCC
Confidence 889999999999999999999999999999999986431 124799999997
No 5
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.2e-49 Score=425.93 Aligned_cols=201 Identities=28% Similarity=0.510 Sum_probs=180.6
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccCCC--CCCceEeeeecccCCCCCcccceeeec
Q psy17835 494 EWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAP--DGDYINANTVAMEIPGSGIVNRYIATQ 571 (702)
Q Consensus 494 ~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~~--~~dYINAsyI~~~i~g~~~~~~yIaTQ 571 (702)
...+.+||++|.......++..+..++|..||||.||+|||++||+|.+.+ .+||||||||+ |+...++|||||
T Consensus 24 ~~~i~~E~~~i~~~~~~~~~~~~~~~~N~~kNRy~di~p~D~sRV~L~~~~~~~~dYINAsyV~----g~~~~~~yIaTQ 99 (312)
T PHA02747 24 FGIIRDEHHQIILKPFDGLIANFEKPENQPKNRYWDIPCWDHNRVILDSGGGSTSDYIHANWID----GFEDDKKFIATQ 99 (312)
T ss_pred HHHHHHHHHHHhcCCCCChhhhhhCchhhccCCCCCCCCCCCCEeEecCCCCCCCCcEEeeeec----CCCCCCeEEEeC
Confidence 456889999998887777888899999999999999999999999998744 37999999998 888889999999
Q ss_pred CCCccchhhhhHHhhhccceeEEEEeeee-ecCccccccccCC-CCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEE
Q psy17835 572 GPLASTVGDFWHMLVEAGSTLVVMVTTLV-ERGRTKCHKYWPS-LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRD 649 (702)
Q Consensus 572 ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~-E~g~~kC~qYWP~-~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~ 649 (702)
+|+++|+.|||+||||++|.+|||||.+. |.|++||.+|||. +++...+|+ |.|++.++..... |+.|.|.|++
T Consensus 100 ~Pl~~T~~dFW~MVwe~~~~~IVMLt~~~~e~g~~kc~~YWp~~~~~~~~~g~--~~V~~~~~~~~~~--~~~~~l~l~~ 175 (312)
T PHA02747 100 GPFAETCADFWKAVWQEHCSIIVMLTPTKGTNGEEKCYQYWCLNEDGNIDMED--FRIETLKTSVRAK--YILTLIEITD 175 (312)
T ss_pred CCcchhHHHHHHHHHhccCCEEEEcccccccCCcccccccCCCCCCCCeEeee--EEEEEEEEEecCC--eEEEEEEEEE
Confidence 99999999999999999999999999999 8999999999996 566788988 9999988877665 9999999999
Q ss_pred CCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcC----------CCCCcEEEEcCC
Q psy17835 650 SQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA----------GMVEPAIVHCSA 702 (702)
Q Consensus 650 ~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~----------~~~~PIVVHCSA 702 (702)
...+++|.|+||||++|||+|+|.++.+|++|+..|+..+. ...+||||||||
T Consensus 176 ~~~~~~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v~~~~~~~~~~~~~~~~~~~PIvVHCsa 238 (312)
T PHA02747 176 KILKDSRKISHFQCSEWFEDETPSDHPDFIKFIKIIDINRKKSGKLFNPKDALLCPIVVHCSD 238 (312)
T ss_pred CCCCCceEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHhhccccccccCCCCEEEEecC
Confidence 88889999999999999999999999999999988865431 113799999997
No 6
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=6.5e-49 Score=416.81 Aligned_cols=195 Identities=19% Similarity=0.400 Sum_probs=174.5
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccccCCC--CCCCCcCCCceeeccCCCCCCceEeeeecccCCCCCcccceeeec
Q psy17835 494 EWALVAQFERLYRKKPGLSMLHANKQENVIKNR--YRDISPYDATRVVLHEAPDGDYINANTVAMEIPGSGIVNRYIATQ 571 (702)
Q Consensus 494 ~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNR--y~dIlPyD~tRV~L~~~~~~dYINAsyI~~~i~g~~~~~~yIaTQ 571 (702)
...+.+||+.|.......++..+.+++|..||| |.||+|||++||+|.+. +||||||||+ ||...++|||||
T Consensus 24 ~~~i~~E~~~i~~~~~~~~~~~~~~~~n~~knr~r~~~i~~~D~sRV~L~~~--~~YINAnyVd----G~~~~~~fIaTQ 97 (298)
T PHA02740 24 LSCIIKEYRAIVPEHEDEANKACAQAENKAKDENLALHITRLLHRRIKLFND--EKVLDARFVD----GYDFEQKFICII 97 (298)
T ss_pred HHHHHHHHHHHhccCccchhhhhhchhhhcccccccCCcCCccCceEEecCC--CCcEEEEEec----CCCCCCcEEEec
Confidence 457999999999888878999999999999996 58999999999999764 6899999998 999999999999
Q ss_pred CCCccchhhhhHHhhhccceeEEEEeeeeecCccccc-cccCC-CCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEE
Q psy17835 572 GPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCH-KYWPS-LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRD 649 (702)
Q Consensus 572 ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~-qYWP~-~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~ 649 (702)
||+++|+.|||+||||++|.+|||||...| .||. +|||. +++...+|+ |.|++.++....+ |+.|.|.|++
T Consensus 98 ~Pl~~T~~dFW~MVwe~~~~iIVMLt~~~e---~kc~~~YWP~~~~~~~~~g~--f~V~~~~~~~~~~--~~~~~l~l~~ 170 (298)
T PHA02740 98 NLCEDACDKFLQALSDNKVQIIVLISRHAD---KKCFNQFWSLKEGCVITSDK--FQIETLEIIIKPH--FNLTLLSLTD 170 (298)
T ss_pred CCchhhHHHHHHHHHhcCCCEEEEcccccc---ccccccCCCCCCCCeEEECC--EEEEEEEEEecCC--EEEEEEEEEc
Confidence 999999999999999999999999999877 4799 99997 455678998 9999988876666 9999999987
Q ss_pred CCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHc--------CCCCCcEEEEcCC
Q psy17835 650 SQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHER--------AGMVEPAIVHCSA 702 (702)
Q Consensus 650 ~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~--------~~~~~PIVVHCSA 702 (702)
.++++|.|+||||++|||+|+|.++..||+|+..|++.+ .+..+||||||||
T Consensus 171 -~~~~~r~V~Hfqyt~WPd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~PIVVHCSa 230 (298)
T PHA02740 171 -KFGQAQKISHFQYTAWPADGFSHDPDAFIDFFCNIDDLCADLEKHKADGKIAPIIIDCID 230 (298)
T ss_pred -CCCCcEEEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCEEEECCC
Confidence 467899999999999999999999999999999987532 2235899999997
No 7
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.3e-48 Score=419.50 Aligned_cols=200 Identities=28% Similarity=0.499 Sum_probs=179.0
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccCC----------------------CCCCceEe
Q psy17835 494 EWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEA----------------------PDGDYINA 551 (702)
Q Consensus 494 ~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~----------------------~~~dYINA 551 (702)
...+..||..+.......++..+..++|..||||.||+|||++||+|... +++|||||
T Consensus 24 ~~~~~~e~~~i~~~~~~~t~~~~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~dYINA 103 (323)
T PHA02746 24 CEFVLLEHAEVMDIPIRGTTNHFLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDGKKIEVTSEDNAENYIHA 103 (323)
T ss_pred HHHHHHHHHHHhcCCCCcchhhccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccccccccccCCCCCCeEEE
Confidence 46688999999998888899999999999999999999999999999853 23699999
Q ss_pred eeecccCCCCCcccceeeecCCCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCC-CCeeEecCceEEEEEe
Q psy17835 552 NTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSL-GETLELSGGRFNISCA 630 (702)
Q Consensus 552 syI~~~i~g~~~~~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~-g~~~~~g~g~~~V~~~ 630 (702)
|||+ |+...++|||||+|+++|+.|||+||||++|.+|||||.++ .++.||++|||.. +....||+ |.|++.
T Consensus 104 syV~----g~~~~~~fIaTQ~Pl~~T~~dFW~MIwe~~v~vIVMLt~~~-e~~~kc~~YWP~~~~~~~~~g~--~~V~~~ 176 (323)
T PHA02746 104 NFVD----GFKEANKFICAQGPKEDTSEDFFKLISEHESQVIVSLTDID-DDDEKCFELWTKEEDSELAFGR--FVAKIL 176 (323)
T ss_pred eccc----CCCCCCeEEEeCCCChhhHHHHHHHHHhhCCCEEEEecccc-cCCccCCCCCCCCCCCCeEEcC--EEEEEE
Confidence 9998 88888999999999999999999999999999999999985 4678999999975 56678998 999998
Q ss_pred eeeecCCCCEEEEEEEEEECCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcC----------CCCCcEEEEc
Q psy17835 631 KEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA----------GMVEPAIVHC 700 (702)
Q Consensus 631 ~~~~~~~~~y~~R~L~I~~~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~----------~~~~PIVVHC 700 (702)
+...... |+.|.|.|++...++.|.|+||||++|||+|+|.++..||+|+..|+..+. ...+||||||
T Consensus 177 ~~~~~~~--~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~PIvVHC 254 (323)
T PHA02746 177 DIIEELS--FTKTRLMITDKISDTSREIHHFWFPDWPDNGIPTGMAEFLELINKVNEEQAELIKQADNDPQTLGPIVVHC 254 (323)
T ss_pred EEEEcCC--eEEEEEEEEECCCCCceEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCEEEEc
Confidence 7766655 999999999988889999999999999999999999999999999986531 1247999999
Q ss_pred CC
Q psy17835 701 SA 702 (702)
Q Consensus 701 SA 702 (702)
||
T Consensus 255 sa 256 (323)
T PHA02746 255 SA 256 (323)
T ss_pred CC
Confidence 97
No 8
>PHA02738 hypothetical protein; Provisional
Probab=100.00 E-value=6.8e-48 Score=413.49 Aligned_cols=198 Identities=33% Similarity=0.591 Sum_probs=175.4
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccCCC-CCCceEeeeecccCCCCCcccceeeecC
Q psy17835 494 EWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAP-DGDYINANTVAMEIPGSGIVNRYIATQG 572 (702)
Q Consensus 494 ~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~~-~~dYINAsyI~~~i~g~~~~~~yIaTQ~ 572 (702)
...+.+||+.|.......++..+. .|..||||.||+|||++||+|+..+ ++||||||||+ |+...++|||||+
T Consensus 24 ~~~i~~E~~~i~~~~~~~t~~~~~--~N~~kNR~~~v~~~d~sRV~L~~~~~~~dYINAsyVd----g~~~~~kfI~TQ~ 97 (320)
T PHA02738 24 EEVITREHQKVISEKVDGTFNAEK--KNRKLNRYLDAVCFDHSRVILPAERNRGDYINANYVD----GFEYKKKFICGQA 97 (320)
T ss_pred HHHHHHHHHHHhcCCCCcchhHHH--HhhhhCCCCCcCCCcCCEEEeCCCCCCCCceEeEEec----CCCCCceeEEecC
Confidence 466888999998776666666554 3999999999999999999997643 47999999998 8888899999999
Q ss_pred CCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCC-CCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEECC
Q psy17835 573 PLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPS-LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQ 651 (702)
Q Consensus 573 Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~-~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~~ 651 (702)
|+++|++|||+||||++|.+|||||+..|.++.||++|||. +++...+|+ |+|++.++..... |+.|.|.|++ .
T Consensus 98 Pl~~T~~dFW~MVwe~~v~~IVmL~~~~E~~~~kc~~YWp~~~~~~~~~g~--f~V~~~~~~~~~~--~~~~~l~l~~-~ 172 (320)
T PHA02738 98 PTRQTCYDFYRMLWMEHVQIIVMLCKKKENGREKCFPYWSDVEQGSIRFGK--FKITTTQVETHPH--YVKSTLLLTD-G 172 (320)
T ss_pred CChHHHHHHHHHHHHhCCcEEEEeeehhhCCeeeccccCCCCCCCceEecc--EEEEEEEEEecCC--eEEEEEEEEe-C
Confidence 99999999999999999999999999999999999999997 467888998 9999998887766 9999999998 4
Q ss_pred CCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcC---------C----CCCcEEEEcCC
Q psy17835 652 TGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA---------G----MVEPAIVHCSA 702 (702)
Q Consensus 652 ~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~---------~----~~~PIVVHCSA 702 (702)
+++.|+|+||||++|||+|+|.++..|++|+..|++.+. + ..+||||||||
T Consensus 173 ~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHCs~ 236 (320)
T PHA02738 173 TSATQTVTHFNFTAWPDHDVPKNTSEFLNFVLEVRQCQKELAQESLQIGHNRLQPPPIVVHCNA 236 (320)
T ss_pred CCCcEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccCccccCCCCeEEEcCC
Confidence 678999999999999999999999999999999986431 1 14799999997
No 9
>KOG0790|consensus
Probab=100.00 E-value=6.6e-49 Score=414.09 Aligned_cols=206 Identities=39% Similarity=0.685 Sum_probs=178.2
Q ss_pred chHHHHHHHHHHhccCC--CCccccccccccccCCCCCCCCcCCCceeeccC----CCCCCceEeeeecccC----CCCC
Q psy17835 493 GEWALVAQFERLYRKKP--GLSMLHANKQENVIKNRYRDISPYDATRVVLHE----APDGDYINANTVAMEI----PGSG 562 (702)
Q Consensus 493 g~~~l~~EFe~L~~~~~--~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~----~~~~dYINAsyI~~~i----~g~~ 562 (702)
...++.+||+.|..... -.+-..+..|+|+.||||+||+|||||||+|.. .+++||||||||.... +...
T Consensus 242 ~k~GfwEEFesLqq~~~~~~~sr~EG~r~eN~~KNRYkNIlPfDHtRViL~d~~~n~pgsdYINAnyi~~~~q~~~~~~~ 321 (600)
T KOG0790|consen 242 AKAGFWEEFESLQQQEVKNLHSRLEGQRPENKGKNRYKNILPFDHTRVILQDRDPNIPGSDYINANYIMIEFQRLCNNSK 321 (600)
T ss_pred hhcchhHHHHHhhhhhhHhhhhhhccccchhhccccccccCcccceeeEeecCCCCCccchhcccchhhhhhhhccCccc
Confidence 35669999999955322 245567889999999999999999999999976 3568999999885221 1111
Q ss_pred cccceeeecCCCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEE
Q psy17835 563 IVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVF 642 (702)
Q Consensus 563 ~~~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~ 642 (702)
.++.||||||.|.+|+.|||+||||+++.+|||.|...|+|+.||.+|||+++....||. +.|+|.++....+ |++
T Consensus 322 ~kKsyIAtQGCL~nTVnDFW~MvwQENsrVIVMtTkE~ERgK~KC~~YWPee~~~e~~G~--~~v~~v~E~~t~d--Y~L 397 (600)
T KOG0790|consen 322 PKKSYIATQGCLQNTVNDFWRMVWQENSRVIVMTTKEVERGKSKCVKYWPEEGALEEYGV--MRVRNVKESDTHD--YTL 397 (600)
T ss_pred cccceeehhhHHHHHHHHHHHHHHhccceEEEEehhhhhcccccccccCCcccchhhcCc--eEEEecccccccc--cee
Confidence 235899999999999999999999999999999999999999999999999988889999 9999999988887 999
Q ss_pred EEEEEEECCC-CceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCC--CCCcEEEEcCC
Q psy17835 643 REFVLRDSQT-GEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAG--MVEPAIVHCSA 702 (702)
Q Consensus 643 R~L~I~~~~~-~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~--~~~PIVVHCSA 702 (702)
|+|.+..... ...|.|+||||..|||||||.+|..+|+||+.|.+.+.. ..+||||||||
T Consensus 398 R~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~V~~rq~~l~~AgpIvVHCSA 460 (600)
T KOG0790|consen 398 RELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEEVNHRQESLMDAGPIVVHCSA 460 (600)
T ss_pred hheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHHhhhhhccccccCcEEEEccC
Confidence 9999997654 468999999999999999999999999999999887633 36899999998
No 10
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00 E-value=3.9e-46 Score=388.78 Aligned_cols=198 Identities=43% Similarity=0.734 Sum_probs=182.7
Q ss_pred HHHHHHHHhccCCC-CccccccccccccCCCCCCCCcCCCceeeccCCC--CCCceEeeeecccCCCCCcccceeeecCC
Q psy17835 497 LVAQFERLYRKKPG-LSMLHANKQENVIKNRYRDISPYDATRVVLHEAP--DGDYINANTVAMEIPGSGIVNRYIATQGP 573 (702)
Q Consensus 497 l~~EFe~L~~~~~~-~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~~--~~dYINAsyI~~~i~g~~~~~~yIaTQ~P 573 (702)
+.+||+.|.+..+. .++..+..++|..||||.||+|||++||+|.+.+ ++||||||||+ |+...++||+||+|
T Consensus 2 ~~~e~~~i~~~~~~~~~~~~~~~~~n~~kNR~~~v~~~d~~RV~l~~~~~~~~~YInAs~v~----~~~~~~~fI~tQ~P 77 (258)
T smart00194 2 LEEEFEKLDRLKPDDESCTVAARPENRDKNRYKDVLPYDHTRVKLTPPPGEGSDYINASYID----GPNGPKAYIATQGP 77 (258)
T ss_pred hHHHHHHhhccCCCCccccccCCccccccCCCCCCCCCCCCEeEccCCCCCCCCceeeeeEe----cCCCccceEEeCCC
Confidence 67899999888766 7888999999999999999999999999998753 47999999998 77778999999999
Q ss_pred CccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEECCCC
Q psy17835 574 LASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTG 653 (702)
Q Consensus 574 l~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~~~~ 653 (702)
+++|++|||+||||+++.+|||||...|.++.+|.+|||.+.+...||. |+|++.+++...+ ++.|+|.|++.+++
T Consensus 78 ~~~t~~dFW~mv~~~~~~~IVmL~~~~e~~~~~~~~Ywp~~~~~~~~g~--~~V~~~~~~~~~~--~~~~~l~v~~~~~~ 153 (258)
T smart00194 78 LPSTVEDFWRMVWEEKVTTIVMLTELEEKGREKCAQYWPEEEEPLTYGD--ITVTLKSVEKVDD--YTIRTLEVTNTGCS 153 (258)
T ss_pred chHHHHHHHHHHHhcCCCEEEEeccceeCCEeeccccCCCCCCcceECC--EEEEEEEEEecCC--EEEEEEEEEECCCC
Confidence 9999999999999999999999999999999999999998767788998 9999999887765 99999999998888
Q ss_pred ceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 654 EKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 654 ~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
+.+.|+||||++|||+|+|.++..+++|++.|+.......+||||||+|
T Consensus 154 ~~~~v~~~~y~~W~d~~~P~~~~~~~~~i~~v~~~~~~~~~pivVHC~~ 202 (258)
T smart00194 154 ETRTVTHYHYTNWPDHGVPESPKSILDLVRAVRKSQSTSTGPIVVHCSA 202 (258)
T ss_pred CcEEEEEEeeCCCCCCCCCCCHHHHHHHHHHHHHhhccCCCCEEEEeCC
Confidence 9999999999999999999999999999999998765446899999986
No 11
>KOG4228|consensus
Probab=100.00 E-value=1.5e-46 Score=434.89 Aligned_cols=197 Identities=40% Similarity=0.705 Sum_probs=183.5
Q ss_pred hHHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccCC---CCCCceEeeeecccCCCCCcccceeee
Q psy17835 494 EWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYIAT 570 (702)
Q Consensus 494 ~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~---~~~dYINAsyI~~~i~g~~~~~~yIaT 570 (702)
..++..||+.|.+. ..++.++.+.+|+.||||.||++||++||+|... +++||||||||+ ||...++||||
T Consensus 540 ~~~F~~Eyesl~~~--~~~~~~s~~~en~~KNRY~nilayD~sRV~L~~i~Gd~~sDYINAnyId----Gy~e~n~yIaa 613 (1087)
T KOG4228|consen 540 GYGFKQEYESLPEG--QFTWEHSNKKENKQKNRYENILAYDHSRVILPPIEGDPNSDYINANYID----GYKEPNAYIAA 613 (1087)
T ss_pred ccchHHHHhhcccc--CCccccCccccccccccCCcchhhhcceeeecccCCCccccceeeeeee----cccccccceec
Confidence 46689999999887 5689999999999999999999999999999864 447999999999 99999999999
Q ss_pred cCCCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEEC
Q psy17835 571 QGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDS 650 (702)
Q Consensus 571 Q~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~ 650 (702)
|||++.|+.||||||||+++.+|||+|++.|.++.||.+||| .++..||+ +.|++...+.... |++|+|.|...
T Consensus 614 QgP~~eTv~DFWRMVWEq~S~~IVMvTnl~E~~r~kC~qYWP--~~t~~yGd--i~V~~~~~~~~a~--y~iRtf~l~~~ 687 (1087)
T KOG4228|consen 614 QGPRPETVGDFWRMVWEQKSAGIVMVTNLEEFSRVKCAQYWP--EGTETYGD--IKVTLVQTKPLAE--YGIRTFALKKQ 687 (1087)
T ss_pred cCCcccchHHHHHHheeccCCcEEEEecccccccccccccCC--CCcccccc--ccccceeeeeecc--ceEEeeecccc
Confidence 999999999999999999999999999999999999999999 45778999 9999998888777 99999999988
Q ss_pred CCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 651 QTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 651 ~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
+....|.|+||||++|||||+|..+.++|.|++.|+.......|||||||||
T Consensus 688 g~~~~R~v~qfhFt~Wpd~gvPe~~t~lL~f~rrvk~~~p~~aGPiVVHCSA 739 (1087)
T KOG4228|consen 688 GENPKREVRQFHFTAWPDHGVPETPTGLLKFRRRVKTFNPPDAGPIVVHCSA 739 (1087)
T ss_pred CCCCCceeeeeeeccCCCCCCcccchHHHHHHHHhccCCCcCCCCEEEECCC
Confidence 8888999999999999999999999999999999998876667999999998
No 12
>KOG0793|consensus
Probab=100.00 E-value=7.7e-43 Score=382.56 Aligned_cols=203 Identities=39% Similarity=0.665 Sum_probs=181.6
Q ss_pred chHHHHHHHHHHhccCCC-CccccccccccccCCCCCCCCcCCCceeeccCC---CCCCceEeeeecccCCCCCccccee
Q psy17835 493 GEWALVAQFERLYRKKPG-LSMLHANKQENVIKNRYRDISPYDATRVVLHEA---PDGDYINANTVAMEIPGSGIVNRYI 568 (702)
Q Consensus 493 g~~~l~~EFe~L~~~~~~-~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~---~~~dYINAsyI~~~i~g~~~~~~yI 568 (702)
+.+.|.+|++.|...... .++..|..++|..|||..+++||||+||.|+.. ..+||||||+|....| +...||
T Consensus 730 nk~rlekeWealc~YqaEpn~r~~aq~e~~a~kNR~~a~LpyDhsrV~l~~~~s~s~~dYiNAS~I~DhDP---R~paYI 806 (1004)
T KOG0793|consen 730 NKNRLEKEWEALCAYQAEPNSRFVAQREENAPKNRSLAVLPYDHSRVLLKAENSHSHSDYINASPIMDHDP---RNPAYI 806 (1004)
T ss_pred CchHHHHHHHHHHHhhcCcchhhhhcccccccccCCCCccccccceeeeccccCccccccccccccccCCC---Ccccee
Confidence 477899999999655332 367889999999999999999999999999863 3479999999975544 457899
Q ss_pred eecCCCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEE
Q psy17835 569 ATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLR 648 (702)
Q Consensus 569 aTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~ 648 (702)
|||||+++|+.|||+||||++|.+|||||.+.|.|...|..|||++|.. .|+- |.|.++++..=. ++|.+|.|-++
T Consensus 807 AtQgPl~stiA~FWQmvWe~G~~vIV~Lt~l~Engv~qc~rYWPdeGse-lyhi--yEV~LVSEHIWc-eDfLVRSFYLK 882 (1004)
T KOG0793|consen 807 ATQGPLPSTIADFWQMVWESGCVVIVMLTPLAENGVRQCYRYWPDEGSE-LYHI--YEVNLVSEHIWC-EDFLVRSFYLK 882 (1004)
T ss_pred eccCCCchHHHHHHHHHHHcCcEEEEEecChhhcchhhhhhcCCCCCcc-eeee--EEeeeehhhhhh-hhHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999998765 4776 999999887643 35999999999
Q ss_pred ECCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 649 DSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 649 ~~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
|.++.++|+||||||.+||+.|+|.+..++|+|-++|++...+...||||||||
T Consensus 883 NlqtseTRTvTQFHfLSWp~egvPasarslLdFRRKVNK~YRGRScpIiVH~sd 936 (1004)
T KOG0793|consen 883 NLQTSETRTVTQFHFLSWPDEGVPASARSLLDFRRKVNKCYRGRSCPIIVHCSD 936 (1004)
T ss_pred hcccccceeeeeeeeecccccCCccchHHHHHHHHHhhhhccCCCCceEEEccC
Confidence 999999999999999999999999999999999999999988888999999996
No 13
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00 E-value=6.1e-41 Score=343.82 Aligned_cols=172 Identities=45% Similarity=0.799 Sum_probs=158.0
Q ss_pred cCCCCCCCCcCCCceeeccCC--CCCCceEeeeecccCCCCCcccceeeecCCCccchhhhhHHhhhccceeEEEEeeee
Q psy17835 523 IKNRYRDISPYDATRVVLHEA--PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLV 600 (702)
Q Consensus 523 ~KNRy~dIlPyD~tRV~L~~~--~~~dYINAsyI~~~i~g~~~~~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~ 600 (702)
+||||+|++|||++||+|... .++||||||||+ |+...++||+||+|+.+|++|||+|||+++|.+||||++..
T Consensus 1 ~knR~~~~~~~d~~rV~l~~~~~~~~~yinA~~v~----~~~~~~~fI~tQ~P~~~t~~~FW~mv~~~~~~~IV~l~~~~ 76 (231)
T cd00047 1 KKNRYKDILPYDHTRVKLKPDDDEGSDYINASYID----GYNPPKAYIATQGPLPNTVEDFWRMVWEQKVPVIVMLTELV 76 (231)
T ss_pred CCCCCCCCCCCCCCEEEccCCCCCCCCcEEeeeEe----cCCCCcceEEcCCCChhhHHHHHHHHHhcCCCEEEEccccc
Confidence 589999999999999999875 457999999998 77778999999999999999999999999999999999999
Q ss_pred ecCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEECCCCceEEEEEEEECCCCCCCCCCChHHHHH
Q psy17835 601 ERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLA 680 (702)
Q Consensus 601 E~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~ 680 (702)
|.+..+|.+|||.+.+...||. |+|++.+++.... ++.|+|+|++.+.++.+.|+||||++|||+++|++...+++
T Consensus 77 e~~~~~~~~Ywp~~~~~~~~g~--~~V~~~~~~~~~~--~~~~~l~i~~~~~~~~~~V~~~~~~~W~d~~~p~~~~~~~~ 152 (231)
T cd00047 77 EKGREKCAQYWPEEEGSLTYGD--ITVTLVSEEKLDD--YTVRTLKLSNTGTGETRTVTHFQYTGWPDHGVPESPDSLLD 152 (231)
T ss_pred cCCCccCccCCCCCCCCeEecC--EEEEEEEEEEcCC--EEEEEEEEEECCCCCceEEEEEeECCCCCCCccCChHHHHH
Confidence 9999999999998656788988 9999999887755 99999999998878999999999999999999999999999
Q ss_pred HHHHHHHHcC-CCCCcEEEEcCC
Q psy17835 681 FTRQVRHERA-GMVEPAIVHCSA 702 (702)
Q Consensus 681 fl~~Vr~~~~-~~~~PIVVHCSA 702 (702)
|++.|+..+. ...+||+|||++
T Consensus 153 ~~~~v~~~~~~~~~~pivVHC~~ 175 (231)
T cd00047 153 LLRKVRKSQQQPGSGPIVVHCSA 175 (231)
T ss_pred HHHHHHHHhccCCCCCeEEECCC
Confidence 9999988753 336799999986
No 14
>KOG0791|consensus
Probab=100.00 E-value=1.7e-41 Score=355.14 Aligned_cols=200 Identities=38% Similarity=0.668 Sum_probs=183.4
Q ss_pred chHHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccC---CCCCCceEeeeecccCCCCCcccceee
Q psy17835 493 GEWALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHE---APDGDYINANTVAMEIPGSGIVNRYIA 569 (702)
Q Consensus 493 g~~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~---~~~~dYINAsyI~~~i~g~~~~~~yIa 569 (702)
...++.+||+.|....-..+...|.+++|..||||.||+|||++||+|.+ .+++|||||||+ ||+...+.|||
T Consensus 94 sn~~f~eey~~lk~~g~~~~~~aA~l~~n~~knr~~nilpYd~Srvkl~~~~e~~~~DYinA~~~----Pg~~s~~~fIA 169 (374)
T KOG0791|consen 94 SNYKFSEEYNELKLVGLDQSKLAALLPLNRPKNRYTNILPYDNSRVKLSPVNEEEGSDYINASYI----PGYNSPREFIA 169 (374)
T ss_pred cchhhHHHHhhhhhhcccchhhhhhcCCCCCcCCcCCCCCcccccceeccccccchhhhhhhhhc----CCCCCcceEEE
Confidence 35778999999988777778889999999999999999999999999985 345799999998 58888899999
Q ss_pred ecCCCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEE
Q psy17835 570 TQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRD 649 (702)
Q Consensus 570 TQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~ 649 (702)
||||+++|..+||+||||+++.+|||||...|+++.||.+|||.......||+ ++|+.+.++...+ +++|+|.|.
T Consensus 170 tQGPlp~t~~~fW~mvwq~~~~~IVmlt~~~e~~R~kc~~ywP~~~~~~~~gd--i~V~~v~e~~~~~--w~ir~~~l~- 244 (374)
T KOG0791|consen 170 TQGPLPETRDDFWKMVWQQKSHIIVMLTKCNEKGRVKCDEYWPDEEVPVAYGD--ITVTMVSEESLDE--WTIREFRLN- 244 (374)
T ss_pred eeCCCCCChhHHHHHHHHhhcceEEEEeecccccchhhhhhcccccccceecc--EEEEEechhhcCC--ceEEEEeee-
Confidence 99999999999999999999999999999999999999999998766688998 9999999987777 999999998
Q ss_pred CCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 650 SQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 650 ~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
..+++|.+.||||+.|||||+|..+..++.|+..+++.-....+|++|||||
T Consensus 245 -~~~~sr~ir~f~y~~wPd~gvp~~~~sl~~f~~~~r~~~~~~~~p~iVhCSA 296 (374)
T KOG0791|consen 245 -YAGESRKIRHFHYTAWPDFGVPSSTESLLQFVRMVRQSLDTSKGPTIVHCSA 296 (374)
T ss_pred -cccccceeEEEEEeeccccCCCCCchhHHHHHHHHHhhcccCCCceeEEeec
Confidence 5678999999999999999999999999999999998765557899999997
No 15
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=100.00 E-value=1.8e-38 Score=323.69 Aligned_cols=174 Identities=38% Similarity=0.759 Sum_probs=154.0
Q ss_pred cccCCCCCCCCcCCCceeeccCCCC-CCceEeeeecccCCCCCcccceeeecCCCccchhhhhHHhhhccceeEEEEeee
Q psy17835 521 NVIKNRYRDISPYDATRVVLHEAPD-GDYINANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTL 599 (702)
Q Consensus 521 N~~KNRy~dIlPyD~tRV~L~~~~~-~dYINAsyI~~~i~g~~~~~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~ 599 (702)
|..|||+.||+|||++||+|.+.++ +||||||||+ ++...++||+||+|+++|++|||+|||+++|.+||||+..
T Consensus 1 n~~knR~~~~~~~d~~rv~l~~~~~~~~yi~A~~v~----~~~~~~~~I~~q~P~~~t~~~FW~mv~~~~~~~Iv~L~~~ 76 (235)
T PF00102_consen 1 NREKNRSPDILPYDDSRVKLNPSPGDSDYINASYVD----GYKNGKKFIVTQAPMPDTIEDFWQMVWEQKVQIIVMLCSF 76 (235)
T ss_dssp GGGGSSSTTS-BBTTTEEETTTTTTSTTEESEEEEE----ESSSTEEEEEEES-SGGGHHHHHHHHHHTTBSEEEEESBS
T ss_pred CCccCCCCCCCcCcceEEEecCCCCccchhhhhhhc----cccchhhheeecccccccccceehheeeccccceeccccc
Confidence 7899999999999999999965443 6899999998 6667899999999999999999999999999999999999
Q ss_pred eecCccccccccC-CCCCeeEecCceEEEEEe-eee-ecCCCCEEEEEEEEEECCCCc-eEEEEEEEECCCCCCCCCCCh
Q psy17835 600 VERGRTKCHKYWP-SLGETLELSGGRFNISCA-KEE-ADPSGSFVFREFVLRDSQTGE-KRDVTQMQYLAWPDHGVPDDV 675 (702)
Q Consensus 600 ~E~g~~kC~qYWP-~~g~~~~~g~g~~~V~~~-~~~-~~~~~~y~~R~L~I~~~~~~~-~r~Vth~qy~~WPd~gvP~~~ 675 (702)
.|.+..+|.+||| ..++...+|. |+|++. +.. .... +++|+|.|++...+. +++|+||||..||++++|.+.
T Consensus 77 ~e~~~~~~~~y~P~~~~~~~~~g~--~~V~~~~~~~~~~~~--~~~~~l~v~~~~~~~~~~~v~~~~~~~W~~~~~P~~~ 152 (235)
T PF00102_consen 77 DESGDEKCDQYWPLKEGESLKFGD--YTVKCKEKIEENSKH--YTVRKLEVTNGKSKKKSRTVTHFHYTNWPDDGVPPSP 152 (235)
T ss_dssp EETTEESS--TSTSSSSSEEEETT--EEEEEEEEEEEEESS--EEEEEEEEEETTTTEEEEEEEEEEEESSSSSSSGSSS
T ss_pred cccccccccccccccccccccccc--ccccccccccccccc--eEEeeccccccccccccccccceeeeecccccccccc
Confidence 9999999999999 5688899999 999999 554 3344 999999999987773 899999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 676 NRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 676 ~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
..+++|++.|+.......+||||||++
T Consensus 153 ~~~~~~~~~v~~~~~~~~~pivVhc~~ 179 (235)
T PF00102_consen 153 ESFLDFIRKVNKSKDDPNGPIVVHCSD 179 (235)
T ss_dssp HHHHHHHHHHHHHHSTTSSEEEEESSS
T ss_pred chhhhhhhhccccccCCccceEeeccc
Confidence 999999999999886667999999985
No 16
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-38 Score=314.56 Aligned_cols=180 Identities=34% Similarity=0.568 Sum_probs=148.6
Q ss_pred ccccccccccccCCCCCCCCcCCCceeeccCC-CCCCceEeeeecccCCCCCcccceeeecCCCccchhhhhHHhhhccc
Q psy17835 512 SMLHANKQENVIKNRYRDISPYDATRVVLHEA-PDGDYINANTVAMEIPGSGIVNRYIATQGPLASTVGDFWHMLVEAGS 590 (702)
Q Consensus 512 ~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~-~~~dYINAsyI~~~i~g~~~~~~yIaTQ~Pl~~T~~DFWrMVwe~~v 590 (702)
++.....+.|-.||||.||+||++|||.|... ..+||||||||+.+. .+|||||||.++|+.|||+|||+...
T Consensus 44 s~~~sls~~~~~rNRYsnIvPYe~tRV~Lk~~k~~~DYINAS~ik~~~------~~yIAtQgP~~~t~ddFW~mvw~n~~ 117 (302)
T COG5599 44 SDDTSLSSTNYARNRYSNIVPYEHTRVHLKYGKSINDYINASYIKTPR------GKYIATQGPKPETIDDFWKMVWHNVP 117 (302)
T ss_pred ccccccCccccccccccccccccCceeeccCCCchhhcccceeeecCC------CceEEecCCCCchHHHHHHHHHhcCC
Confidence 34456778899999999999999999999876 347999999998442 35999999999999999999999988
Q ss_pred --eeEEEEeeeeecCccccccccCC-CCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEECCCCceEEEEEEEECCCC
Q psy17835 591 --TLVVMVTTLVERGRTKCHKYWPS-LGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWP 667 (702)
Q Consensus 591 --~~IVMLt~~~E~g~~kC~qYWP~-~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~~~~~~r~Vth~qy~~WP 667 (702)
.+||||+.+.|.+++||.+|||. .++...+|. ..+.-++.+......+.++.++|+... |..+.|.||||.+|+
T Consensus 118 ~~gvIVmLt~l~E~~rekc~qYWp~~~~~~~~~G~--~v~~~~~~e~~~d~~~~~~~f~L~~~~-~~~k~Ihhf~y~nW~ 194 (302)
T COG5599 118 NNGVIVMLTSLPEYNREKCDQYWPLGYDDTLIIGL--RVIKQKKYELFNDNIVNVHNFELTSIN-GPPKKIHHFQYINWV 194 (302)
T ss_pred CceEEEEecChHHHhHHHHhhhCCCCcCcceeeee--EEEEEecccccccceeeeeecccccCC-CCccEEEEEEecCcc
Confidence 99999999999999999999995 356777775 555555566666666889999999855 899999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 668 DHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 668 d~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
|.++| +...+.+++..+...- -..+||+|||||
T Consensus 195 D~~~p-~i~sl~~~~~sl~~sp-~~t~piiVHCSA 227 (302)
T COG5599 195 DFNVP-DIRSLTEVIHSLNDSP-VRTGPIIVHCSA 227 (302)
T ss_pred ccCCc-CHHHHHHHHHHhhcCc-CCCCCEEEEecc
Confidence 99999 5666666555554321 146899999998
No 17
>KOG3531|consensus
Probab=100.00 E-value=2.1e-38 Score=353.86 Aligned_cols=243 Identities=42% Similarity=0.711 Sum_probs=226.1
Q ss_pred cEEEEEEEeeCCCCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccc
Q psy17835 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSIS 81 (702)
Q Consensus 2 ~l~FrVKFyv~~p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (702)
-+.|.||||+|||-.|++|.|||+|.||+|+|+..|++.|...+|++|+++++|
T Consensus 112 ~~~~~vkf~~p~~~~l~ee~trylf~~q~k~dl~~G~l~c~d~ta~lLss~~~q-------------------------- 165 (1036)
T KOG3531|consen 112 VLRFVVKFFPPDPIQLQEEYTRYLFALQIKRDLALGRLTCNDTTAALLSSHIVQ-------------------------- 165 (1036)
T ss_pred hhheeecccCCCccccchhHHHHhhhhccccccccCCccCCCchhhhhhccccc--------------------------
Confidence 468999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeecCCCCceEEe
Q psy17835 82 AELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLG 161 (702)
Q Consensus 82 ae~GDy~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd~~~~~i~LG 161 (702)
++.|||+ +.-...||+..+|+|+| ..++++|++.|++|.|++|+|+.++.|+.|++|++||+++|.++|-+|..+.|+
T Consensus 166 se~gdf~-~~~d~~~l~~~~~~p~q-~~~~~ki~~~h~~hig~tpaesdl~~le~ar~~~~yg~~~h~a~D~Eg~~~~la 243 (1036)
T KOG3531|consen 166 SEIGDFD-EYLDREHLAHTRYLPNQ-DELEKKIMEFHQKHIGQTPAESDFQLLEIARRLDMYGIRLHPAKDREGTKINLA 243 (1036)
T ss_pred ccCCchh-ccccceeeeeeecCchH-HHHHHHHHHhhhhhhccCchhhhHHHHHHHHHHhhhccccchhhhcccchHHHH
Confidence 9999994 33455799999999999 889999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcEEEeeCCeeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhhccccccccC-CC
Q psy17835 162 VTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFRLHS-PR 240 (702)
Q Consensus 162 V~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve~H~Ffr~~~-~~ 240 (702)
|.+.||.||+.-.+++.|.|.+|.|++|++|.|.|+++++.......++.|.+.+...||.+|+-|+|+|+||||.. +.
T Consensus 244 v~hmgi~Vfr~~tkinTf~wAkirklsfkrk~fLiklhp~~~g~~qdt~ef~~~~rd~ck~fwk~cve~h~ffr~~~~~~ 323 (1036)
T KOG3531|consen 244 VAHMGILVFRGLTKINTFNWAKIRKLSFKRKRFLIKLHPDSYGYYKDTLEFLMASRDECKNFWKICVEHHAFFRLVEEPK 323 (1036)
T ss_pred HHhhhhHHHhcceeccCCCHHHHHHHHHHHHhhhheeccccccchhhhHHHHHHhHHHHHHHHhccccccchhhhhcccC
Confidence 99999999999999999999999999999999999999987778888999999999999999999999999999966 33
Q ss_pred cCCCCCCCCCCCCCcccccccchHHHHHHHHhhh
Q psy17835 241 RSRKFLPPPLSLGSKFFSSGRTEYQTYQQARRSV 274 (702)
Q Consensus 241 ~~~~~~~~~~~~gs~f~y~grT~~q~~~~~~r~~ 274 (702)
..++. .+++.|++|||+|||+.|..+..+...
T Consensus 324 ~k~k~--~~~S~gssfrysgrtqkq~~~y~re~~ 355 (1036)
T KOG3531|consen 324 PKPKT--VFFSKGSSFRYSGRTQKQLLDYVREGG 355 (1036)
T ss_pred CCCCc--eeecccchhhhcCcchhccchhhhhcc
Confidence 33333 489999999999999999988765533
No 18
>KOG4228|consensus
Probab=100.00 E-value=1.8e-36 Score=351.47 Aligned_cols=199 Identities=34% Similarity=0.585 Sum_probs=173.1
Q ss_pred chHHHHHHHHHHhccCCC-CccccccccccccCCCCCCCCcCCCceeeccCCCC--CCceEeeeecccCCCCCcccceee
Q psy17835 493 GEWALVAQFERLYRKKPG-LSMLHANKQENVIKNRYRDISPYDATRVVLHEAPD--GDYINANTVAMEIPGSGIVNRYIA 569 (702)
Q Consensus 493 g~~~l~~EFe~L~~~~~~-~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~~~--~dYINAsyI~~~i~g~~~~~~yIa 569 (702)
++..|..||+.|....+. ..+.+|.+++|+.|||+.+|+|||++||.|.+..+ +|||||+||+ ||+....|||
T Consensus 824 ~~t~le~EF~~L~~~~~~~~~~~~~~l~~N~~KNR~~~i~P~d~~rv~L~~~~G~~sdYINAs~id----gy~~~~~fiv 899 (1087)
T KOG4228|consen 824 NKTGLEEEFKTLNSCKPRTRMMICGNLPENKSKNRQVNILPYDRNRVILIPTHGESSDYINASFID----GYRQPKAFIV 899 (1087)
T ss_pred CCcchHHHHHHHhhccccchhhhccccchhcccccccccCCchhcccceeccCCCcccccchhhhc----ccCCcceEEE
Confidence 567899999999776654 34455999999999999999999999999998544 7999999998 9999999999
Q ss_pred ecCCCccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEE
Q psy17835 570 TQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRD 649 (702)
Q Consensus 570 TQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~ 649 (702)
||+||.+|++||||||||++|++||||+.+.+. ++|+||||.++ ...||. +.|..++...... ++.|+|.|++
T Consensus 900 tq~PL~~T~~DFWrmi~d~~~tsiVmL~~l~~~--~~C~qyw~~~g-~~~yg~--i~Ve~~~~~~~~~--~t~r~f~i~n 972 (1087)
T KOG4228|consen 900 TQGPLAETVEDFWRMIWDQNVTSIVMLTELKHP--EKCPQYWPPEG-SQRYGP--IEVEDMNEHINPQ--YTAREFGVTN 972 (1087)
T ss_pred ecCCcccchHHHHHHhhccceeEEEEecccCcc--cccccccCCcC-ceecCc--EEEEecccccchh--hhhhhheeee
Confidence 999999999999999999999999999999776 89999999854 567998 9999999888777 9999999999
Q ss_pred CCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHH-HHHHcC-CCCCcEEEEcCC
Q psy17835 650 SQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQ-VRHERA-GMVEPAIVHCSA 702 (702)
Q Consensus 650 ~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~-Vr~~~~-~~~~PIVVHCSA 702 (702)
...+..|+|.||||+.||..++|+....++.++-. +++.+. +..+|++|||++
T Consensus 973 ~~~~~~r~v~qfq~~~WP~~~~~p~~~~~~~~i~~~~~~~q~~~~~~P~~Vhc~n 1027 (1087)
T KOG4228|consen 973 EREKQSRTVRQFQFTGWPEYGKPPQSKGPISKIPSVASKWQQLGADGPIIVHCLN 1027 (1087)
T ss_pred ccccCceEEEEEEecCCcccCcCCCCcchhhhHHHHHHHHHhhcCCCCEEEEEcC
Confidence 99999999999999999999888766655555544 444443 337999999986
No 19
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=100.00 E-value=6.6e-34 Score=310.79 Aligned_cols=165 Identities=15% Similarity=0.221 Sum_probs=135.8
Q ss_pred CCCCCCCCcCCCceeeccCCCCCCceEeeeecccCCCCCcccceeeecCCCc--cchhhhhHHhhhccceeEEEEeeeee
Q psy17835 524 KNRYRDISPYDATRVVLHEAPDGDYINANTVAMEIPGSGIVNRYIATQGPLA--STVGDFWHMLVEAGSTLVVMVTTLVE 601 (702)
Q Consensus 524 KNRy~dIlPyD~tRV~L~~~~~~dYINAsyI~~~i~g~~~~~~yIaTQ~Pl~--~T~~DFWrMVwe~~v~~IVMLt~~~E 601 (702)
|---.||+|+|+|||+|.+ ++|||||||+ ++.++++|++|.|+. +|++|||+||||++|.+|||||...|
T Consensus 301 ~~~~~~I~~~~~TrV~ls~---g~yI~ANyI~-----~~~k~~aIa~QYP~nt~eTieDFWrMVWEn~~~VIVMLT~l~E 372 (535)
T PRK15375 301 RFAVSSIPINQQTQVKLSD---GMPVPVNTLT-----FDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQ 372 (535)
T ss_pred HHHhcccCccccceEEcCC---CCccccceee-----ecCccceEeccCCCCchhhHHHHHHHHHHcCCCEEEEeecccc
Confidence 3444799999999999954 7999999997 334567999999975 89999999999999999999999999
Q ss_pred cCccccccccCCCCCeeEecCceEEEEEeeeeecCCCCEEEEEEEEEECCCCceEEEEEEEECCCCCCCCCCChHHHHHH
Q psy17835 602 RGRTKCHKYWPSLGETLELSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAF 681 (702)
Q Consensus 602 ~g~~kC~qYWP~~g~~~~~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~f 681 (702)
.++.+|.+||+ +...||+ |.|++.+++.... .+++|.+.+.....+..+.|+||||++|||||+|++...+++|
T Consensus 373 ~g~~KC~pYW~---~s~tYGd--ItVts~seesls~-g~iIR~f~L~Ik~~E~R~tV~QFHyTnWPDHGVPpST~~LleL 446 (535)
T PRK15375 373 MQAKQLPPYFR---GSYTFGE--VHTNSQKVSSASQ-GEAIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYL 446 (535)
T ss_pred CcccccCccCC---Ccceecc--EEEEEEEEEeccC-CceEEEEEEEEecCCceeEEEEEEeCCCCCCCCCCChHHHHHH
Confidence 99999999996 3567998 9999888766432 2777887665544444558999999999999999998899999
Q ss_pred HHHHHHHcCC--------CCCcEEEEcCC
Q psy17835 682 TRQVRHERAG--------MVEPAIVHCSA 702 (702)
Q Consensus 682 l~~Vr~~~~~--------~~~PIVVHCSA 702 (702)
++.|+..... ..+++||||||
T Consensus 447 vr~Vr~~~q~~~~~~~~~nk~~PVVHCSA 475 (535)
T PRK15375 447 ADRVKNSNQNGAPGRSSSDKHLPMIHCLG 475 (535)
T ss_pred HHHHHHhhhcccccccccCCCCceEEcCC
Confidence 9999875321 11334899997
No 20
>KOG0789|consensus
Probab=100.00 E-value=2.4e-33 Score=310.99 Aligned_cols=202 Identities=32% Similarity=0.443 Sum_probs=146.7
Q ss_pred HHHHHHHHHHhccCCCCccccccccccccCCCCCCCCcCCCceeeccCCCCCCceEeeeecccCCCCCcccceeeecCCC
Q psy17835 495 WALVAQFERLYRKKPGLSMLHANKQENVIKNRYRDISPYDATRVVLHEAPDGDYINANTVAMEIPGSGIVNRYIATQGPL 574 (702)
Q Consensus 495 ~~l~~EFe~L~~~~~~~~~~~a~~~~N~~KNRy~dIlPyD~tRV~L~~~~~~dYINAsyI~~~i~g~~~~~~yIaTQ~Pl 574 (702)
..+..+|..+....... ..+.....|..||||.||.|||++||+|......||||||||+++. .. .+||+||||+
T Consensus 102 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~kNr~~dv~~~d~~rV~l~~~~~~dyI~A~~v~~~~---~~-~~~I~tQ~Pl 176 (415)
T KOG0789|consen 102 VEMFKQFRSNKVEKESS-HLCDAFLKNMDKNRYSDVQCLDHTRVKLKPPQDKDYIHASKIYFPK---GP-RTAILTQAPL 176 (415)
T ss_pred HHHHHHHHHhhccCCcc-hhhhhhhccccccccCCcCcccCCeeecCCCCCcccchhhccCCcC---CC-cCceecCCCC
Confidence 33555555544333321 2466778889999999999999999999865468999999998331 13 7899999999
Q ss_pred ccchhhhhHHhhhccceeEEEEeeeeecCccccccccCCCC-CeeEecCceEEEEEeeeeecC-CCCEEEEEEEEEECCC
Q psy17835 575 ASTVGDFWHMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLG-ETLELSGGRFNISCAKEEADP-SGSFVFREFVLRDSQT 652 (702)
Q Consensus 575 ~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g-~~~~~g~g~~~V~~~~~~~~~-~~~y~~R~L~I~~~~~ 652 (702)
++|+.|||+|||++++..|||||...|.|+.+|.+|||... +...|+....++......... ......+.+.+.....
T Consensus 177 ~~t~~dFW~mv~~~k~~~Ivml~~~~E~~~~kc~~Y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (415)
T KOG0789|consen 177 SKTTEDFWRMVFEEKVESVVLLCSDEELGAAECASYFPSKRGVKLTFLEFGKKFVENRKVEMKQQDQTSTVGLLLLVLPE 256 (415)
T ss_pred cccHHHHHHHHHHcCCCEEEEecchhhccHHHHhhcCcccCCCeeeecccceeEEEeeeeecccccccceeeEEEeecCC
Confidence 99999999999999999999999999999999999999865 455666521222222222211 0112333333333333
Q ss_pred C--ceEEEEEEEECCCCCCCCCCChHHHHHHHHH-HHHHcCCCCCcEEEEcCC
Q psy17835 653 G--EKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQ-VRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 653 ~--~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~-Vr~~~~~~~~PIVVHCSA 702 (702)
+ ..+.|.||||++|||+|+|++...++.++.. +... ....+||+|||||
T Consensus 257 ~~~~~~~v~~~~~~~WPd~~~p~~~~~~l~~~~~~~~~~-~~~~~P~vVhcsa 308 (415)
T KOG0789|consen 257 GLEISSSVVHYHYINWPDHGAPDSVKSILPLLRQSVLEL-RPKQEPIEVHCSA 308 (415)
T ss_pred CccccceEEEEeeCCCccccCCcchHHHHHHHHhhhhhh-cCCCCCeEEECCC
Confidence 3 3469999999999999999999999999976 1111 2246899999997
No 21
>KOG3529|consensus
Probab=99.95 E-value=6.3e-29 Score=281.70 Aligned_cols=207 Identities=34% Similarity=0.574 Sum_probs=193.1
Q ss_pred cEEEEEEEeeCCCC-CccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhccccccccc
Q psy17835 2 NFYFRVKFYVSDPS-KLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSI 80 (702)
Q Consensus 2 ~l~FrVKFyv~~p~-~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (702)
+|+|+||||+++.. .|.+++|.+|||||+|..||.+.+.|+.+++++||||+||
T Consensus 86 ~~~f~akfy~E~v~eeli~~~t~~Lffl~vk~~il~~~i~~~~E~~~~las~~vq------------------------- 140 (596)
T KOG3529|consen 86 NFHFHAKFYPEDVAEELIQDITQHLFFLQVKEAILSDEIYCPPETSVLLASYAVQ------------------------- 140 (596)
T ss_pred ceeeeeecchHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHH-------------------------
Confidence 68999999999999 8999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCCCCCCcCCCCC--------cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeec
Q psy17835 81 SAELGDYHPDEHKPGYLSGLSLVPGQ--------TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKD 152 (702)
Q Consensus 81 ~ae~GDy~~~~~~~~yl~~~~~~P~~--------~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd 152 (702)
|-+|||+.+.|..+++.....+|.. .+.|+.+|.+.|..|+||+..+|+++||++|+.|++||+.+|++++
T Consensus 141 -a~~gdy~~~~~~~~~l~~~~~lP~~~~~q~~~s~~~~e~ri~~~~~~~~~~~re~a~leylki~qdle~ygvny~~i~~ 219 (596)
T KOG3529|consen 141 -AKYGDYDKETHKVGRLAGDRLLPQRVLDQHKMTPDMWEDRIKEWYAEHRGMTREEAMLEYLKIAQDLEMYGVNYFEIKN 219 (596)
T ss_pred -HHhccccchhhhhhccccCcccchhhhhhccccHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhccccccccceeecCC
Confidence 9999999999999999999999975 5779999999999999999999999999999999999999999999
Q ss_pred CCCCceEEeecCCcEEEeeCCeee---eeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhh
Q psy17835 153 SQDRDIQLGVTANGLVIFHAGARL---NLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229 (702)
Q Consensus 153 ~~~~~i~LGV~~~GI~v~~~~~~~---~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve 229 (702)
+.|.++||||+..|+.+|+...++ -.|+|+.|.+|+|..|+|.|+..+ .+...+.|.-+..+.-+.+..+|..
T Consensus 220 k~gt~~~lgv~~~gl~~y~~~~k~~P~~~f~w~eirnisf~~kkf~~k~id----~~~~~f~~~~~~~~~~~~~l~~~~~ 295 (596)
T KOG3529|consen 220 KKGTDLWLGVDALGLNIYDESDKLTPKIGFPWSEIRNISFNDKKFHIKPID----KKASDFSFYAPRLRINKRILDLCMG 295 (596)
T ss_pred CCCCccccccccCCccccccccCCCCCCCCCccccCCCCCCcccccCCCCC----cccCcccccccccccchhhhhhhhc
Confidence 999999999999999999876664 489999999999999999998754 3334578888888899999999999
Q ss_pred ccccccccC
Q psy17835 230 HHTFFRLHS 238 (702)
Q Consensus 230 ~H~Ffr~~~ 238 (702)
.|..|+-..
T Consensus 296 ~~~l~~rr~ 304 (596)
T KOG3529|consen 296 NHELYMRRR 304 (596)
T ss_pred cchhhhhcc
Confidence 999998644
No 22
>cd00836 FERM_C FERM_C domain. The FERM_C domain is the third structural domain within the FERM domain. The FERM domain is found in the cytoskeletal-associated proteins such as ezrin, moesin, radixin, 4.1R, and merlin. These proteins provide a link between the membrane and cytoskeleton and are involved in signal transduction pathways. The FERM_C domain is also found in protein tyrosine phosphatases (PTPs), the tyrosine kinases FAKand JAK, in addition to other proteins involved in signaling. This domain is structuraly similar to the PH and PTB domains and consequently is capable of binding to both peptides and phospholipids at different sites.
Probab=99.91 E-value=4.5e-24 Score=188.81 Aligned_cols=92 Identities=43% Similarity=0.888 Sum_probs=87.1
Q ss_pred CCCceEEeeecCCCCceEEeecCCcEEEeeCCeeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHH
Q psy17835 142 MYGVSVHGAKDSQDRDIQLGVTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCK 221 (702)
Q Consensus 142 ~YGv~~f~~kd~~~~~i~LGV~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak 221 (702)
+||+++|+|||..|.+++|||++.||.||+++.++..|+|++|.+|+|++|+|.|+++++. ..+.++.|+++++++||
T Consensus 1 ~YGv~~~~vkd~~g~~~~lGV~~~Gi~v~~~~~~~~~f~W~~I~~isf~~k~F~i~~~~~~--~~~~~~~f~~~s~~~~k 78 (92)
T cd00836 1 MYGVDLHPVKDKKGTELLLGVTAEGILVYDDGTPINEFPWPEIRKISFKRKKFTLKVRDKD--GQEITLSFQTPSHRACK 78 (92)
T ss_pred CCCeeeEEEECCCCCeEEEEEeCCCcEEecCCCEEEEEEcccceEEEEcCCEEEEEEecCc--CceeeEEEECCCHHHHH
Confidence 7999999999999999999999999999998889999999999999999999999998654 45678999999999999
Q ss_pred HHHHHHhhcccccc
Q psy17835 222 NLWKSCVEHHTFFR 235 (702)
Q Consensus 222 ~Lw~~~ve~H~Ffr 235 (702)
+||++|+|+|+|||
T Consensus 79 ~lwk~~ve~H~Ffr 92 (92)
T cd00836 79 YLWKLCVEQHAFFR 92 (92)
T ss_pred HHHHHHHhhhhhcC
Confidence 99999999999997
No 23
>PF00373 FERM_M: FERM central domain; InterPro: IPR019748 The FERM domain (F for 4.1 protein, E for ezrin, R for radixin and M for moesin) is a widespread protein module involved in localising proteins to the plasma membrane []. FERM domains are found in a number of cytoskeletal-associated proteins that associate with various proteins at the interface between the plasma membrane and the cytoskeleton. The FERM domain is located at the N terminus of the majority of FERM-containing proteins [, ], which includes: Band 4.1, which links the spectrin-actin cytoskeleton of erythrocytes to the plasma membrane. Ezrin, a component of the undercoat of the microvilli plasma membrane. Moesin, which is probably involved in binding major cytoskeletal structures to the plasma membrane. Radixin, which is involved in the binding of the barbed end of actin filaments to the plasma membrane in the undercoat of the cell- to-cell adherens junction. Talin, a cytoskeletal protein concentrated in regions of cell-substratum contact and, in lymphocytes, of cell-cell contacts. Filopodin, a slime mold protein that binds actin and which is involved in the control of cell motility and chemotaxis. Merlin (or schwannomin). Protein NBL4. Unconventional myosins X, VIIa and XV, which are mutated in congenital deafness. Focal-adhesion kinases (FAKs), cytoplasmic protein tyrosine kinases involved in signalling through integrins. Janus tyrosine kinases (JAKs), cytoplasmic tyrosine kinases that are non-covalently associated with the cytoplasmic tails of receptors for cytokines or polypeptidic hormones. Non-receptor tyrosine-protein kinase TYK2. Protein-tyrosine phosphatases PTPN3 and PTPN4, enzyme that appear to act at junctions between the membrane and the cytoskeleton. Protein-tyrosine phosphatases PTPN14 and PTP-D1, PTP-RL10 and PTP2E. Caenorhabditis elegans protein phosphatase ptp-1. Ezrin, moesin, and radixin are highly related proteins (ERM protein family), but the other proteins in which the FERM domain is found do not share any region of similarity outside of this domain. ERM proteins are made of three domains, the FERM domain, a central helical domain and a C-terminal tail domain, which binds F-actin. The amino-acid sequence of the FERM domain is highly conserved among ERM proteins and is responsible for membrane association by direct binding to the cytoplasmic domain or tail of integral membrane proteins. ERM proteins are regulated by an intramolecular association of the FERM and C-terminal tail domains that masks their binding sites for other molecules. For cytoskeleton-membrane cross-linking, the dormant molecules becomes activated and the FERM domain attaches to the membrane by binding specific membrane proteins, while the last 34 residues of the tail bind actin filaments. Aside from binding to membranes, the activated FERM domain of ERM proteins can also bind the guanine nucleotide dissociation inhibitor of Rho GTPase (RhoDGI), which suggests that in addition to functioning as a cross-linker, ERM proteins may influence Rho signalling pathways. The crystal structure of the FERM domain reveals that it is composed of three structural modules (F1, F2, and F3) that together form a compact clover-shaped structure []. The FERM domain has also been called the amino-terminal domain, the 30kDa domain, 4.1N30, the membrane-cytoskeletal-linking domain, the ERM-like domain, the ezrin-like domain of the band 4.1 superfamily, the conserved N-terminal region, and the membrane attachment domain [].; PDB: 4DXA_B 2EMS_A 2ZPY_A 1J19_A 2D10_B 2D11_B 1GC6_A 2D2Q_A 2EMT_A 2YVC_A ....
Probab=99.86 E-value=1.7e-21 Score=180.63 Aligned_cols=110 Identities=35% Similarity=0.591 Sum_probs=97.5
Q ss_pred CCCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCC-CCC
Q psy17835 13 DPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYH-PDE 91 (702)
Q Consensus 13 ~p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~-~~~ 91 (702)
||..+.|+.+++++|+|+|+||++|+++|+.++|++||||++| +++|||+ ...
T Consensus 1 ~p~~~~d~~~~~lly~Q~~~~vl~g~~~~~~e~a~~LAAl~~q--------------------------~~~gd~~~~~~ 54 (126)
T PF00373_consen 1 DPLHIDDPITRHLLYLQARRDVLQGRLPCSEEDAIKLAALQLQ--------------------------AEYGDYNSEQE 54 (126)
T ss_dssp SGGGTTSHHHHHHHHHHHHHHHHTTSSTS-HHHHHHHHHHHHH--------------------------HHHTSSTTTTT
T ss_pred CCcccCCHHHHHHHHHHHHHHHHcCcCCCCHHHHHHHHHHHHH--------------------------HHhcCCCcccc
Confidence 6888999999999999999999999999999999999999999 9999999 555
Q ss_pred CCCCCCCCC-------cCCC--------CCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEE
Q psy17835 92 HKPGYLSGL-------SLVP--------GQTEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVH 148 (702)
Q Consensus 92 ~~~~yl~~~-------~~~P--------~~~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f 148 (702)
+..+++... .|+| ...++|+++|.+.|++++|+++.+|+..||+.|++|++||+++|
T Consensus 55 ~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~~~~~I~~~~~~l~~~s~~~a~~~fl~~~~~~p~yG~~~F 126 (126)
T PF00373_consen 55 HSSGYIDPEIKEFQLENFIPKAPKLIKKMKQKEWEKRILEQHKKLRGMSPEEAKLQFLQICQSLPTYGSTFF 126 (126)
T ss_dssp SSTTTTTGSHHCTCGHGTSSHHHHHHCCSTHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHCTSTTTTEEEE
T ss_pred cCcccccccccchhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCCCCCceeC
Confidence 656665432 3889 45889999999999999999999999999999999999999987
No 24
>PF09380 FERM_C: FERM C-terminal PH-like domain; InterPro: IPR018980 The FERM domain (F for 4.1 protein, E for ezrin, R for radixin and M for moesin) is a widespread protein module involved in localising proteins to the plasma membrane []. FERM domains are found in a number of cytoskeletal-associated proteins that associate with various proteins at the interface between the plasma membrane and the cytoskeleton. The FERM domain is located at the N terminus of the majority of FERM-containing proteins [, ], which includes: Band 4.1, which links the spectrin-actin cytoskeleton of erythrocytes to the plasma membrane. Ezrin, a component of the undercoat of the microvilli plasma membrane. Moesin, which is probably involved in binding major cytoskeletal structures to the plasma membrane. Radixin, which is involved in the binding of the barbed end of actin filaments to the plasma membrane in the undercoat of the cell- to-cell adherens junction. Talin, a cytoskeletal protein concentrated in regions of cell-substratum contact and, in lymphocytes, of cell-cell contacts. Filopodin, a slime mold protein that binds actin and which is involved in the control of cell motility and chemotaxis. Merlin (or schwannomin). Protein NBL4. Unconventional myosins X, VIIa and XV, which are mutated in congenital deafness. Focal-adhesion kinases (FAKs), cytoplasmic protein tyrosine kinases involved in signalling through integrins. Janus tyrosine kinases (JAKs), cytoplasmic tyrosine kinases that are non-covalently associated with the cytoplasmic tails of receptors for cytokines or polypeptidic hormones. Non-receptor tyrosine-protein kinase TYK2. Protein-tyrosine phosphatases PTPN3 and PTPN4, enzyme that appear to act at junctions between the membrane and the cytoskeleton. Protein-tyrosine phosphatases PTPN14 and PTP-D1, PTP-RL10 and PTP2E. Caenorhabditis elegans protein phosphatase ptp-1. Ezrin, moesin, and radixin are highly related proteins (ERM protein family), but the other proteins in which the FERM domain is found do not share any region of similarity outside of this domain. ERM proteins are made of three domains, the FERM domain, a central helical domain and a C-terminal tail domain, which binds F-actin. The amino-acid sequence of the FERM domain is highly conserved among ERM proteins and is responsible for membrane association by direct binding to the cytoplasmic domain or tail of integral membrane proteins. ERM proteins are regulated by an intramolecular association of the FERM and C-terminal tail domains that masks their binding sites for other molecules. For cytoskeleton-membrane cross-linking, the dormant molecules becomes activated and the FERM domain attaches to the membrane by binding specific membrane proteins, while the last 34 residues of the tail bind actin filaments. Aside from binding to membranes, the activated FERM domain of ERM proteins can also bind the guanine nucleotide dissociation inhibitor of Rho GTPase (RhoDGI), which suggests that in addition to functioning as a cross-linker, ERM proteins may influence Rho signalling pathways. The crystal structure of the FERM domain reveals that it is composed of three structural modules (F1, F2, and F3) that together form a compact clover-shaped structure []. The FERM domain has also been called the amino-terminal domain, the 30kDa domain, 4.1N30, the membrane-cytoskeletal-linking domain, the ERM-like domain, the ezrin-like domain of the band 4.1 superfamily, the conserved N-terminal region, and the membrane attachment domain []. This entry, however, represents the PH-like domain found at the C terminus of the eukaryote proteins moesin, ezrin and radixin.; PDB: 1NI2_B 3U8Z_B 1H4R_B 1ISN_A 3QIJ_B 1GG3_A 2HE7_A 3BIN_A 2I1J_A 2I1K_A ....
Probab=99.80 E-value=1.1e-19 Score=159.96 Aligned_cols=86 Identities=37% Similarity=0.777 Sum_probs=78.1
Q ss_pred cCCCCceEEeecCCcEEEeeCCeee--eeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhh
Q psy17835 152 DSQDRDIQLGVTANGLVIFHAGARL--NLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229 (702)
Q Consensus 152 d~~~~~i~LGV~~~GI~v~~~~~~~--~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve 229 (702)
|++|.+++|||++.||.||+++.++ ..|+|++|.+|+|++|+|.|++.. +..+.++.|++++.+.||+||++|++
T Consensus 1 D~~~~~~~LGv~~~GI~i~~~~~~~~~~~f~W~~I~~l~~~~k~F~I~~~~---~~~~~~~~f~~~~~~~aK~lw~~cv~ 77 (90)
T PF09380_consen 1 DKNGSPLWLGVSPRGISIYRDNNRISTQFFPWSEISKLSFKKKKFTIEVRD---ESKEIKLKFYTPSPKAAKYLWKLCVE 77 (90)
T ss_dssp ETTSBEEEEEEESSEEEEEETTBSSSSEEEEGGGEEEEEEETTEEEEEESS---TSSSEEEEEE-SSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEEcCCEeEEEeCCCcccceeeehhheeEEEecccEEEEEEee---cccceEEEEEECCHHHHHHHHHHHHH
Confidence 6789999999999999999999998 999999999999999999999975 34567899999999999999999999
Q ss_pred ccccccccCCC
Q psy17835 230 HHTFFRLHSPR 240 (702)
Q Consensus 230 ~H~Ffr~~~~~ 240 (702)
+|+|||+.++.
T Consensus 78 ~H~Ff~~~~~~ 88 (90)
T PF09380_consen 78 QHTFFRLRRPP 88 (90)
T ss_dssp HHHHHHHHTS-
T ss_pred HHHHhcccCCC
Confidence 99999997754
No 25
>smart00295 B41 Band 4.1 homologues. Also known as ezrin/radixin/moesin (ERM) protein domains. Present in myosins, ezrin, radixin, moesin, protein tyrosine phosphatases. Plasma membrane-binding domain. These proteins play structural and regulatory roles in the assembly and stabilization of specialized plasmamembrane domains. Some PDZ domain containing proteins bind one or more of this family. Now includes JAKs.
Probab=99.79 E-value=2.6e-19 Score=179.57 Aligned_cols=121 Identities=44% Similarity=0.644 Sum_probs=109.5
Q ss_pred cEEEEEEEeeCCCCCccchHHHH-HHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhccccccccc
Q psy17835 2 NFYFRVKFYVSDPSKLQEEYTRY-HFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSI 80 (702)
Q Consensus 2 ~l~FrVKFyv~~p~~L~~e~tR~-l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (702)
.|+||+|||++++..+.++.+++ ++|+|++.||++|+++|+.++|+.||||.+|
T Consensus 77 ~l~fr~r~~~~~~~~~~~d~~~~~~ly~Q~~~di~~g~~~~~~~~~~~Laal~~q------------------------- 131 (207)
T smart00295 77 TLYFRVKFYPPDPLQLKEDPTRLNLLYLQVRNDILEGRLPCPEEEALLLAALALQ------------------------- 131 (207)
T ss_pred EEEEEEEEccCCHHHhcchhHHHHHHHHHHHHHHHcCccCCCHHHHHHHHHHHHH-------------------------
Confidence 58999999999877677677766 9999999999999999999999999999999
Q ss_pred ccccCCCCCCCC-CCCCCCCCcCCCCC--------cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEE
Q psy17835 81 SAELGDYHPDEH-KPGYLSGLSLVPGQ--------TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVH 148 (702)
Q Consensus 81 ~ae~GDy~~~~~-~~~yl~~~~~~P~~--------~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f 148 (702)
+++|||+...+ ...+.....++|.. .+.|+++|.+.|+++.||++.+|+..||+.|++|++||+++|
T Consensus 132 -~~~gd~~~~~~~~~~~~~~~~~lP~~~~~~~~~~~~~~~~~i~~~~~~~~~~s~~~a~~~yl~~~~~lp~fG~~~f 207 (207)
T smart00295 132 -AEFGDYDEELHVLLKELSLKRFLPKQLLDSEKRTLKEWRERIVSLHKELIGLSPEEAKLKYLELAEKLPTYGVELF 207 (207)
T ss_pred -HHhcCCChHhcCCccccccceeCChhhhhhccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHhccccccCcccC
Confidence 99999998765 45667777889986 467999999999999999999999999999999999999876
No 26
>KOG4371|consensus
Probab=99.74 E-value=5.6e-18 Score=194.20 Aligned_cols=267 Identities=16% Similarity=0.252 Sum_probs=208.7
Q ss_pred cEEEEEEEeeCCCCCccchHH---HHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhccccccc
Q psy17835 2 NFYFRVKFYVSDPSKLQEEYT---RYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWF 78 (702)
Q Consensus 2 ~l~FrVKFyv~~p~~L~~e~t---R~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~ 78 (702)
.++|||+||+.+-..+..+++ |+.+|+|.++++++.++.-..+.+.+||++++|
T Consensus 589 ~~h~rv~~y~s~l~~is~~~akltrse~Y~~~q~qvLeeq~V~~~da~f~laaFalq----------------------- 645 (1332)
T KOG4371|consen 589 VLHLRVKFYPSILDFISTDVAKLTRSELYLQCQRQVLEEQIVPKRDAAFELAAFALQ----------------------- 645 (1332)
T ss_pred EEEEEEEeccccCcchhhhhhhhhhhHHHHhhhHHHHhhcccccchhhhhHHhhhhh-----------------------
Confidence 478999999998777777777 999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCCCCCcCCCCC------cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeee-
Q psy17835 79 SISAELGDYHPDEHKPGYLSGLSLVPGQ------TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAK- 151 (702)
Q Consensus 79 ~~~ae~GDy~~~~~~~~yl~~~~~~P~~------~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~k- 151 (702)
+++|++.++.+..+|..+..|+|.+ ..-+...+.++|....|.+..+|...|++++++.+.|+++++++.
T Consensus 646 ---adsGNr~~n~~~gdysdP~hY~ps~yss~e~q~li~~~~p~~Hg~~~~t~aseah~kYV~~p~r~pd~e~h~qp~f~ 722 (1332)
T KOG4371|consen 646 ---ADSGNRPPNPVIGDYSDPQHYLPSKYSSFEDQSLIKNILPELHGHYAGTRASEAHHKYVQIPQRHPDFEAHVQPVFR 722 (1332)
T ss_pred ---hhcCCCCCCccccccCChhhhcccceecccchhhhhhccccccCchhhcchhhccCcceecccCCCCccceeccccC
Confidence 9999999999999999999999987 233445555899999999999999999999999999999999762
Q ss_pred ----------cCCCCceEEeecCCcEEEeeC----CeeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecCh
Q psy17835 152 ----------DSQDRDIQLGVTANGLVIFHA----GARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTY 217 (702)
Q Consensus 152 ----------d~~~~~i~LGV~~~GI~v~~~----~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~ 217 (702)
..-+.+.|+|..++||.||.. ..++..|||..|.++-|.++.|.|.-...+.+ ..+.|++..+
T Consensus 723 ~kP~sar~~kt~~~~pp~~gp~prgIsi~~p~~~a~~~~a~fPpa~v~~lqFd~k~f~Is~~g~p~~---~i~~~yt~hh 799 (1332)
T KOG4371|consen 723 TKPTSARPFKTDTGSPPWIGPMPRGISIYEPQGGAREVIAEFPPAQVQTLQFDKKRFVISAVGAPDE---QIETFYTDHH 799 (1332)
T ss_pred CCCcccCcCcCCCCCCccccccccceeccccCCCCccccCCCCCCCCCceeecCCCceeecCCCCCc---ceEEeeccCC
Confidence 234678999999999999962 23467899999999999999999987654443 4468999999
Q ss_pred HHHHHHHHHHhhccccccccC---CCcCCCCC----CCCCCCCCcc--cccccchHHHHHHHHhhheeccccCCCCCccc
Q psy17835 218 RSCKNLWKSCVEHHTFFRLHS---PRRSRKFL----PPPLSLGSKF--FSSGRTEYQTYQQARRSVVLINGCDVSGMHHE 288 (702)
Q Consensus 218 ~~ak~Lw~~~ve~H~Ffr~~~---~~~~~~~~----~~~~~~gs~f--~y~grT~~q~~~~~~r~~~~~~g~~~~~~~~~ 288 (702)
..+.++++++...|.||+-.. +..+..+. .....+.+.+ .+.+-..--..++...++. .++.+++++.+.
T Consensus 800 ~~S~~~L~~~~~thR~ym~~~q~~~~LrH~~~~pr~~~pn~~~~~~~eS~~S~nl~l~~hQl~~~s~-~s~~sag~~~~s 878 (1332)
T KOG4371|consen 800 SKSSYFLRFAASTHRWYMKMRQWKSTLRHENAMPRTIPPNPIRQGLEESPPSTNLLLSAHQLFAKSS-VSQESAGANRPS 878 (1332)
T ss_pred cchhHHHHHHHHhhHHHhhchhhhhhhhhhccCCCCCCCcchhhcccCCCCCCccccchHHhHhhhh-hccccccccccc
Confidence 999999999999999999763 22222210 0111112222 3333333333444444443 566777777777
Q ss_pred eeeeeccccc
Q psy17835 289 QVVNIIRTSR 298 (702)
Q Consensus 289 ~~~~~~~~s~ 298 (702)
.+.++.++|+
T Consensus 879 ~lp~h~pSs~ 888 (1332)
T KOG4371|consen 879 ELPPHAPSSK 888 (1332)
T ss_pred cCCCCCCCcc
Confidence 7777776553
No 27
>KOG4261|consensus
Probab=99.24 E-value=1e-12 Score=147.94 Aligned_cols=171 Identities=25% Similarity=0.385 Sum_probs=143.9
Q ss_pred EEEEEEEeeCCCC-CccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccc
Q psy17835 3 FYFRVKFYVSDPS-KLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSIS 81 (702)
Q Consensus 3 l~FrVKFyv~~p~-~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (702)
+.+|-|||-.|-. .-.++....|||.|.|.+|+.|.+|++.++|+.+|++..|
T Consensus 190 ~llRrk~f~sd~nvdsrdpvqlnllyvQ~rD~il~g~hpv~~~kA~e~a~~qsh-------------------------- 243 (1003)
T KOG4261|consen 190 LLLRRKFFFSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFEKACEFAGFQSH-------------------------- 243 (1003)
T ss_pred HHHHHHHhhccccccccchHHhhhhhhhhhcccccCcCchhHHHHHHHhccccc--------------------------
Confidence 4456676665443 6778889999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCCCCCCcCCCCC--cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeecC-----C
Q psy17835 82 AELGDYHPDEHKPGYLSGLSLVPGQ--TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDS-----Q 154 (702)
Q Consensus 82 ae~GDy~~~~~~~~yl~~~~~~P~~--~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd~-----~ 154 (702)
..+|++..++|. +++....|+|+. ....+++|...|+.+.||+.-+|...|.+.|+.|..||+.||-||.. .
T Consensus 244 iq~g~~~~~k~k-~~ld~kd~lpk~y~k~k~ekKif~~~k~~~~~sei~ak~~y~k~~r~l~tygvtff~VKek~~gknk 322 (1003)
T KOG4261|consen 244 IQFGPHNEDKHK-GFLDLKDFLPKEYVKQKGEKKIFQAHKNCGGMSEIDAKVKYVKLARSLKTYGVTFFLVKEKMKGKNK 322 (1003)
T ss_pred cccCCchhhccc-cchhccccChHHHhccccchhhhhhhhhhcchhHHHHHHHHHHHhccccccceEEEEehhhccCccc
Confidence 999999999998 999999999986 22239999999999999999999999999999999999999999743 3
Q ss_pred CCceEEeecCCcEEEeeCCee--eeeeccccccceEEeccEEEEEEcc
Q psy17835 155 DRDIQLGVTANGLVIFHAGAR--LNLLSWVKIVKISFKRKQFFVQLKR 200 (702)
Q Consensus 155 ~~~i~LGV~~~GI~v~~~~~~--~~~f~W~~I~klsf~~k~F~I~~~~ 200 (702)
+++-.|||+..-+.-.....+ +...|-..|..|.-.-|.|.+....
T Consensus 323 lVprlLgv~K~svmr~de~tk~il~ewpl~~V~rw~~s~~~ftldfgd 370 (1003)
T KOG4261|consen 323 LVPRLLGVTKESVMRVDEKTKEILQEWPLTTVRRWAASPKSFTLDFGD 370 (1003)
T ss_pred ccchhhhhhHHhhhhcchhhhhHhhhcchhHHHHhccCcceecccccc
Confidence 567789999875554443334 3456667899999999999987754
No 28
>KOG0248|consensus
Probab=99.08 E-value=1.1e-10 Score=130.53 Aligned_cols=184 Identities=16% Similarity=0.209 Sum_probs=147.5
Q ss_pred CCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCC
Q psy17835 14 PSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHK 93 (702)
Q Consensus 14 p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~ 93 (702)
-..-.++..|-|+|.|.-+.|..||.+.+.+.+..+|||..| .++||-+..- .
T Consensus 687 ~~~~et~~erlll~~~~s~eIv~gr~p~~~~l~e~~AaL~aq--------------------------~~~gd~~~~~-k 739 (936)
T KOG0248|consen 687 LALTETPIERQFLVWRASEEIVNGRIPLSNQLCESLAALYAQ--------------------------MVFGDANQSL-S 739 (936)
T ss_pred hhcCCChHHHHHHHhhchHHhhcCcCcchHHHHHHHHHHHHH--------------------------Hhhccccccc-h
Confidence 344456788999999999999999999999999999999999 8888876321 1
Q ss_pred CCCC--CCCcCCCCC------cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeecC-----CCCceEE
Q psy17835 94 PGYL--SGLSLVPGQ------TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDS-----QDRDIQL 160 (702)
Q Consensus 94 ~~yl--~~~~~~P~~------~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd~-----~~~~i~L 160 (702)
..-| -..+|.|.. .+.+..+|...|..++|++++|+..-||..|++|++||..+|.|+.. .+.-+||
T Consensus 740 ~q~l~qv~~rFyP~ryrdga~~eqLR~~l~t~W~~L~G~S~~eCvRIYLTVARKWPFFGAKLF~A~P~~~SS~~~tfiWl 819 (936)
T KOG0248|consen 740 DQQFEFISQRFYPSKMLDVACIKSLRLQINSNWSELIGMSENECVRIYLTVARKWPFFGAKLFEASPMRTSSERKTFIWL 819 (936)
T ss_pred HHHHHHHHHHhChhhhhccCCHHHHHHHHhhhHHHHhCCChhHheeeeeeecccCcccchhhhhcCCCccccccceeEEE
Confidence 1111 122355543 56688999999999999999999999999999999999999988643 3456999
Q ss_pred eecCCcEEEeeC--CeeeeeeccccccceEEeccEEEEEEccCCCC----CCcceEEEEecChHHHHHHH
Q psy17835 161 GVTANGLVIFHA--GARLNLLSWVKIVKISFKRKQFFVQLKREPSE----NYDTLLGFNMTTYRSCKNLW 224 (702)
Q Consensus 161 GV~~~GI~v~~~--~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~----~~~~~~~F~~~~~~~ak~Lw 224 (702)
+|+..|+.+.+- ...+..|+|+.+....--+..|.++++.-++. ....++.|.|..++.+..-+
T Consensus 820 AVnEDGvSlLd~N~M~vi~tYpYsSl~TFGG~qDDFMlVI~~tp~K~~~~~~~EKL~F~MAkPKI~E~Tl 889 (936)
T KOG0248|consen 820 AVNEDGVSLLDRNHMDVIRTYPYSSLSTFGGFQDDFMLVIIRTPGKHPDEAPKEKLTFSMAKPKIEELTL 889 (936)
T ss_pred EEcCCcceeccccceeEEEEeeccccccccCcccceEEEEecCCCCCCCccchhhhhhhhccchHHHHHH
Confidence 999999999863 33477999999999999999999999864433 23467899999988775443
No 29
>KOG4371|consensus
Probab=98.90 E-value=4e-10 Score=130.75 Aligned_cols=215 Identities=14% Similarity=0.032 Sum_probs=136.8
Q ss_pred cEEEEEEEeeCCCCCccchHHHHHHHHHHHHHHHcCcc--ccCHHHHHHHhhhhhhcccccchhhh--------------
Q psy17835 2 NFYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRL--ILAPSTACLLASYTVQCNTYISENFL-------------- 65 (702)
Q Consensus 2 ~l~FrVKFyv~~p~~L~~e~tR~l~yLQlr~dil~grl--~c~~~~a~~Laal~lQ~~~~~~~~~~-------------- 65 (702)
.|+|||+||+.++..|.++..|+.||||||.|+|..-+ +.+++.|..+|++++|++.+......
T Consensus 117 ~l~frv~~yi~~~~~l~~~~~r~~yylql~~n~l~~~apr~~~e~a~~~~a~lalq~d~g~~~~g~s~~~qy~g~~~~~~ 196 (1332)
T KOG4371|consen 117 SLEFRVSGYIRNNISLAASPGRKSYYLQLFTNTLAPVAPRPAPEKAAEEYARLALQNDFGEEEEGESQFGQYGGTLSGRD 196 (1332)
T ss_pred EEEEEEEEeecCceeccCCCCccchhhhhhhhhhccccCCcchHHHHHHHHhhhhcCccCcCCcccccccccCcceeccC
Confidence 37999999999999999999999999999999998444 77899999999999996443322222
Q ss_pred ------------------------hhhhhhcc----ccccccccccc-CCCCCCCCCCCCCCCCcCCCC--CcHHHHHHH
Q psy17835 66 ------------------------SLEIMADT----KLVWFSISAEL-GDYHPDEHKPGYLSGLSLVPG--QTEEMELKI 114 (702)
Q Consensus 66 ------------------------~~~~~~~~----~~~~~~~~ae~-GDy~~~~~~~~yl~~~~~~P~--~~~~~~~~I 114 (702)
|++.|.++ ..+.+++.--+ |. ...|.......|. ++.+..+-+
T Consensus 197 p~~~g~g~s~~n~l~~~~~~~nE~~~~~~~~~~~e~~r~~i~l~~~l~~~------~~~~~~~~d~a~~g~~~~~~a~~~ 270 (1332)
T KOG4371|consen 197 PFDEGSGNSNENQLREKKLHKNEQLAHRLSSSSEEIVRASIHLDEPLVMA------QIPEEKPKDKAIPGFDNAYDADFD 270 (1332)
T ss_pred ccccccccccccccHHHHHhhhHHHHHHHHHHHHHhcccccCCCCCcccc------CCccccCccccccccCchhhhhhh
Confidence 33333332 22222221100 00 1122222222222 245556778
Q ss_pred HHHHHHhcCCCHHHHHHHHHHHhhccc-CCCceEEeeecCCCCceEEeecCCcEEEe-------eC-------Ceeeeee
Q psy17835 115 EELHKLHKGQSPADAEYNYLEHAKRCE-MYGVSVHGAKDSQDRDIQLGVTANGLVIF-------HA-------GARLNLL 179 (702)
Q Consensus 115 ~~~Hk~~~G~t~~eAe~~yL~~a~~L~-~YGv~~f~~kd~~~~~i~LGV~~~GI~v~-------~~-------~~~~~~f 179 (702)
..+|..|-|+--.|+++.||++|+++- .--.+ .+.+++....+|-......+| .. +-....+
T Consensus 271 ~~c~~~h~g~~~~e~~Ls~~~~A~~~~~~~~a~---~~~s~~sk~e~~~~~a~~~~y~~~~~~~~~e~~~v~s~p~~t~~ 347 (1332)
T KOG4371|consen 271 NSCPLHHYGAVHLETGLSPLEEAQRALRANRAR---HKPSNVSKAEEAKLAARQRYYNASDIRREEEEEVVESDPAVTVP 347 (1332)
T ss_pred cCCCcccccchhhhccccHHHHHHHHHHhhhce---ecccccchhhhhhhhHHHHHHhHHHhhhcchheecccCcccccc
Confidence 889999999999999999999997742 11111 122222222223222222222 11 1123378
Q ss_pred ccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhhccccc
Q psy17835 180 SWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFF 234 (702)
Q Consensus 180 ~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve~H~Ff 234 (702)
.|+ .|++|.++.|.|.... ....-..+.....+.|...|++.|..-
T Consensus 348 ~~p--~kl~~E~~~~~Ir~~~-------~r~~~~~~~d~~~d~l~~~c~D~~~~s 393 (1332)
T KOG4371|consen 348 VLP--KKLEVEEAPKSIRPPR-------YRKSREIEEDVVVDRLVEECVDEKEDS 393 (1332)
T ss_pred CCC--CCcchhccccccCCcc-------cccccccccchhHHHHHHHhcchhhhH
Confidence 999 9999999999986432 122344566778899999999998763
No 30
>KOG3531|consensus
Probab=98.59 E-value=1e-08 Score=117.37 Aligned_cols=166 Identities=4% Similarity=-0.296 Sum_probs=144.1
Q ss_pred EEEEEEEeeCCCCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhccccccccccc
Q psy17835 3 FYFRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISA 82 (702)
Q Consensus 3 l~FrVKFyv~~p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~a 82 (702)
|.|..|||.+|+.+|.++.+|+.+|||.+++...|-|.|+.+.++.-+.|+.| +
T Consensus 252 fr~~tkinTf~wAkirklsfkrk~fLiklhp~~~g~~qdt~ef~~~~rd~ck~--------------------------f 305 (1036)
T KOG3531|consen 252 FRGLTKINTFNWAKIRKLSFKRKRFLIKLHPDSYGYYKDTLEFLMASRDECKN--------------------------F 305 (1036)
T ss_pred HhcceeccCCCHHHHHHHHHHHHhhhheeccccccchhhhHHHHHHhHHHHHH--------------------------H
Confidence 67889999999999999999999999999999999999999999999999999 7
Q ss_pred ccCCCCCCCCCC-CCCCCCcCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeeecCCCCceEEe
Q psy17835 83 ELGDYHPDEHKP-GYLSGLSLVPGQTEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLG 161 (702)
Q Consensus 83 e~GDy~~~~~~~-~yl~~~~~~P~~~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~kd~~~~~i~LG 161 (702)
--|++....... -|+... +.|.+.-..-..++.-|++++|+.+.+||...++++.+.+.||...+..++..+....+.
T Consensus 306 wk~cve~h~ffr~~~~~~~-k~k~~~~S~gssfrysgrtqkq~~~y~re~~~k~~~f~r~~~~~~s~~r~~~ss~~~l~s 384 (1036)
T KOG3531|consen 306 WKICVEHHAFFRLVEEPKP-KPKTVFFSKGSSFRYSGRTQKQLLDYVREGGKKREPFERKHSKSHSTRRGLYSSPYGLVS 384 (1036)
T ss_pred HhccccccchhhhhcccCC-CCCceeecccchhhhcCcchhccchhhhhcccccchhhcccccccccchhhccCCchhhh
Confidence 777765432111 233333 455555555678999999999999999999999999999999999999999999989999
Q ss_pred ecCCcEEEeeCCeeeeeeccccccceEEeccEEEE
Q psy17835 162 VTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFV 196 (702)
Q Consensus 162 V~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I 196 (702)
.-+.|+.. ..-..++.|.|.++.++.++++-|..
T Consensus 385 d~~~~~~~-~sl~~~n~~~~~~~~~~~~ss~P~l~ 418 (1036)
T KOG3531|consen 385 DVPEQHRN-GSLYEANGTDSYNKHQNVHSSEPHIA 418 (1036)
T ss_pred hccccccc-cceeecccccCcccccccccCCceec
Confidence 99999999 66666889999999999999998865
No 31
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=98.45 E-value=2.7e-07 Score=81.78 Aligned_cols=46 Identities=41% Similarity=0.869 Sum_probs=40.0
Q ss_pred EEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcC--CCCCcEEEEcCC
Q psy17835 657 DVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA--GMVEPAIVHCSA 702 (702)
Q Consensus 657 ~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~--~~~~PIVVHCSA 702 (702)
+|.||||++|||+++|+....+++|+..++.... ...+||+|||++
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~ 48 (105)
T smart00012 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSA 48 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3789999999999999999999999999987653 235799999985
No 32
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=98.45 E-value=2.7e-07 Score=81.78 Aligned_cols=46 Identities=41% Similarity=0.869 Sum_probs=40.0
Q ss_pred EEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcC--CCCCcEEEEcCC
Q psy17835 657 DVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERA--GMVEPAIVHCSA 702 (702)
Q Consensus 657 ~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~--~~~~PIVVHCSA 702 (702)
+|.||||++|||+++|+....+++|+..++.... ...+||+|||++
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~ 48 (105)
T smart00404 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSA 48 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 3789999999999999999999999999987653 235799999985
No 33
>PF08736 FA: FERM adjacent (FA); InterPro: IPR014847 This region is found adjacent to Band 4.1 / FERM domains (IPR000299 from INTERPRO) in a subset of FERM containing protein. The region has been hypothesised to play a role in regulatory adaptation, based on similarity to other protein kinase substrates [].
Probab=97.98 E-value=5.3e-06 Score=64.07 Aligned_cols=36 Identities=36% Similarity=0.324 Sum_probs=30.9
Q ss_pred CCCCCCcccccccchHHHHHHHHhhheeccccCCCCCccceeeeec
Q psy17835 249 PLSLGSKFFSSGRTEYQTYQQARRSVVLINGCDVSGMHHEQVVNII 294 (702)
Q Consensus 249 ~~~~gs~f~y~grT~~q~~~~~~r~~~~~~g~~~~~~~~~~~~~~~ 294 (702)
++++||+|||+|||++|+.+......+ .++.|.|.+
T Consensus 3 ~fs~GSkFRYSGRTe~Q~~~~~~~~~r----------~~~~f~R~~ 38 (47)
T PF08736_consen 3 FFSLGSKFRYSGRTEKQTVEESKEIPR----------KPPPFERSP 38 (47)
T ss_pred cCcCcCcceecCccHHHHHHHHHhcCC----------CCCCeEeCC
Confidence 678999999999999999999777444 678999866
No 34
>KOG3552|consensus
Probab=97.76 E-value=3.4e-05 Score=89.87 Aligned_cols=140 Identities=24% Similarity=0.353 Sum_probs=101.5
Q ss_pred EEEEEEeeCCCCCc--cchHHHHHHHHHHHHHHHcCccc--cCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccc
Q psy17835 4 YFRVKFYVSDPSKL--QEEYTRYHFYLQIRKDILAHRLI--LAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFS 79 (702)
Q Consensus 4 ~FrVKFyv~~p~~L--~~e~tR~l~yLQlr~dil~grl~--c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~ 79 (702)
.|||-|-+-||..| .|...-.++|||-..||.+.|+- ...+.|..||||.+|
T Consensus 264 LFRItFVPkdp~dLlqrDpvAfeYLYlQsCnDV~QERFapElk~elALRLAALhm~------------------------ 319 (1298)
T KOG3552|consen 264 LFRITFVPKDPADLLQRDPVAFEYLYLQSCNDVNQERFAPELKPELALRLAALHMH------------------------ 319 (1298)
T ss_pred EEEEEeccCCHHHHHhcCchHHHHHHHhhhhhHhHhhcccccchHHHHHHHHHHHH------------------------
Confidence 59999999999744 45678899999999999999994 457889999999998
Q ss_pred cccccCCCCCCCCCCCCCCC----CcCCCCC------cHHHHHHHHHHHHHh-------cCCCHHHHHHHHHHHhhcccC
Q psy17835 80 ISAELGDYHPDEHKPGYLSG----LSLVPGQ------TEEMELKIEELHKLH-------KGQSPADAEYNYLEHAKRCEM 142 (702)
Q Consensus 80 ~~ae~GDy~~~~~~~~yl~~----~~~~P~~------~~~~~~~I~~~Hk~~-------~G~t~~eAe~~yL~~a~~L~~ 142 (702)
++-+-.-.+.+-..+|+.. ..|+|.- .+++.+.|..+-|.- +-++..+|+++||++...|+.
T Consensus 320 -~~~~a~~q~qKislKyIEkewGlE~Fvp~sll~~MK~K~ikkaiSh~lK~Nqnl~~p~kklt~lQaklhYL~ila~L~s 398 (1298)
T KOG3552|consen 320 -QHALANNQAQKISLKYIEKEWGLERFVPVSLLEGMKRKEIKKAISHFLKLNQNLGSPSKKLTQLQAKLHYLDILASLPS 398 (1298)
T ss_pred -HHHHhhccccchhhhhhhhhhchhhcccHHHHhhhhHHHHHHHHHHHHHhhhccCChhHHHHHHHHHHHHHHHHhhhhh
Confidence 1222222222334455542 3577753 345555555544432 337889999999999999999
Q ss_pred CCceEEeeecCCC---CceEEeecCC-cEE
Q psy17835 143 YGVSVHGAKDSQD---RDIQLGVTAN-GLV 168 (702)
Q Consensus 143 YGv~~f~~kd~~~---~~i~LGV~~~-GI~ 168 (702)
||-..|.+.-..+ ..+.|=|+++ ||.
T Consensus 399 YGgr~F~atl~~~~~~se~~LLVgpryGiS 428 (1298)
T KOG3552|consen 399 YGGRCFSATLREGDRESERVLLVGPRYGIS 428 (1298)
T ss_pred ccchhhhhhhhhcccceeEEEEeccccchh
Confidence 9999999865555 6777888875 554
No 35
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=97.56 E-value=0.00011 Score=72.35 Aligned_cols=34 Identities=18% Similarity=0.192 Sum_probs=31.5
Q ss_pred cceeeecCCCccchhhhhHHhhhccceeEEEEee
Q psy17835 565 NRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTT 598 (702)
Q Consensus 565 ~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~ 598 (702)
.+||++-+|++.+..+|....-+.+++.||.+|.
T Consensus 16 ~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~ 49 (166)
T PTZ00242 16 FKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCG 49 (166)
T ss_pred eEEEEecCCCcccHHHHHHHHHhCCCeEEEecCC
Confidence 5899999999999999999999999999998863
No 36
>KOG3527|consensus
Probab=97.14 E-value=0.0001 Score=85.92 Aligned_cols=233 Identities=19% Similarity=0.208 Sum_probs=171.2
Q ss_pred EEEEEeeCCCCCccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhccccccccccccc
Q psy17835 5 FRVKFYVSDPSKLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAEL 84 (702)
Q Consensus 5 FrVKFyv~~p~~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~ 84 (702)
+.++++.. |....+.-.|+.=.++.|++.++++.+....+...|++++++ -.+
T Consensus 459 ~E~r~k~q-~~~s~dk~a~ee~~kerrrrelEer~~Ae~~~h~~ltsf~A~--------------------------n~~ 511 (975)
T KOG3527|consen 459 QEVILKSQ-PSISEDKHAREEEVKERRRRELEERTPAELSLHERLTSFAAD--------------------------NIF 511 (975)
T ss_pred hhhhcccC-Ccchhhhhcchhhccccccccccccccchhhhhhhcccchhh--------------------------hhc
Confidence 34455554 444555667888899999999999999999999999999999 666
Q ss_pred CCCCCCCCCCC---CCCCCcCCCCC-cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEee---ecCCCCc
Q psy17835 85 GDYHPDEHKPG---YLSGLSLVPGQ-TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGA---KDSQDRD 157 (702)
Q Consensus 85 GDy~~~~~~~~---yl~~~~~~P~~-~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~---kd~~~~~ 157 (702)
||-..+..... -.+...++... .....+.|..+|+..+|.+..+++-.+..-+....+||..++.. ++..+.+
T Consensus 512 g~~~~E~tdtkE~d~~sg~rvi~~~h~~~~~~~i~~l~e~~rs~s~setee~~~~r~~~k~~~Gi~~~~~e~~~~k~~~~ 591 (975)
T KOG3527|consen 512 GDAPAETTDTKELDKVSGPRVIRAYHSGETYKKIVNLSELMRSQSESETEEQFRDRCKHKALYGIHLFEAESDKDKEPEP 591 (975)
T ss_pred cccchhhccccccccccCCcccccccCcccccccccchhhhccccccchhhhhhcccccccccccchhhhhcccccCccc
Confidence 65322221111 11222233222 34456788999999999999999999999999999999999954 2233322
Q ss_pred eE-EeecCCcEEEeeCCeeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhhccccccc
Q psy17835 158 IQ-LGVTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTFFRL 236 (702)
Q Consensus 158 i~-LGV~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve~H~Ffr~ 236 (702)
+. -.++..++-.|+.......+-|..|.+.++....|.+.+.....+..+..+.+..+..-..+.=|++...+|+|+..
T Consensus 592 ~d~~~~~ee~ipeaEpv~~t~s~v~~ni~~ksy~~~~l~~dv~~~AvEk~e~p~v~te~v~v~~e~~~k~~~~~~t~~pi 671 (975)
T KOG3527|consen 592 VDRAEVGEEDIPEAEPVQKTHSFVWQNIITKSYREGYLSIDVKAGAVEKNEKPLVKTEPVTVLDERNAKSAEIHTTFVPI 671 (975)
T ss_pred ccchhcccccccccceeccccccccccccccccccccceeccCcchhhcccccceeccceehhhhccccccccccccccc
Confidence 22 12228899999988888899999999999999999999986555544556778888889999999999999999999
Q ss_pred cCCCcCCCCCCCCCCCCCcccccccchHH
Q psy17835 237 HSPRRSRKFLPPPLSLGSKFFSSGRTEYQ 265 (702)
Q Consensus 237 ~~~~~~~~~~~~~~~~gs~f~y~grT~~q 265 (702)
.++.....+. .....+|++.+.+||..+
T Consensus 672 ~qtetttiks-~~s~i~s~t~tts~t~t~ 699 (975)
T KOG3527|consen 672 VQTETKTIKS-ESSFISSRTLTTSRTQTQ 699 (975)
T ss_pred cccccceeec-cccccccccccccccchh
Confidence 8765544332 123345788888888755
No 37
>KOG4257|consensus
Probab=96.91 E-value=0.0021 Score=73.41 Aligned_cols=205 Identities=15% Similarity=0.185 Sum_probs=143.6
Q ss_pred cEEEEEEEeeCCCCCccch--HHHHHHHHHHHHHHHcCcc-ccCHHHHHHHhhhhhhcccccchhhhhhhhhhccccccc
Q psy17835 2 NFYFRVKFYVSDPSKLQEE--YTRYHFYLQIRKDILAHRL-ILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWF 78 (702)
Q Consensus 2 ~l~FrVKFyv~~p~~L~~e--~tR~l~yLQlr~dil~grl-~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~ 78 (702)
++-+|++|-+.|...|+.| .|-.+||-|+|.|..+.-- ..+.+.|++||+|-+-
T Consensus 93 r~elr~Ry~P~~~~El~~eD~st~~Y~~~Qv~~df~q~~a~~~s~evAlql~cL~vr----------------------- 149 (974)
T KOG4257|consen 93 RLELRMRYMPQSVYELQAEDSSTFVYLHEQVVDDFFQHVAWRSSVEVALQLACLKVR----------------------- 149 (974)
T ss_pred eeeeeeeeCcHHHHHHHhcccchhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH-----------------------
Confidence 4678999999988765543 6778888999999988665 5678899999999988
Q ss_pred ccccccCCCCCC----CCCCCCCCC----CcCCCCC------cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCC
Q psy17835 79 SISAELGDYHPD----EHKPGYLSG----LSLVPGQ------TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYG 144 (702)
Q Consensus 79 ~~~ae~GDy~~~----~~~~~yl~~----~~~~P~~------~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YG 144 (702)
-.|-+.+-. ++.-+++.. ..|+|++ ...+.+.|..-.++...+.+.|..+.|++.-...-.+-
T Consensus 150 ---r~Fk~~~~na~~kksh~e~lekevglksffPksl~~~~Kpk~lkKliqq~fkkfan~n~eE~i~rff~lL~~v~~~d 226 (974)
T KOG4257|consen 150 ---RDFKEHQHNAPGKKSHLEDLEKEVGLKSFFPKSLHNPFKPKHLKKLIQQTFKKFANLNPEESIIRFFALLLEVYKFD 226 (974)
T ss_pred ---HHHHhCcccCCCccccHHHHHHHhhHHhhChHhhhcccChHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhh
Confidence 434332211 111223332 2477875 57788999999999999999999999999988887888
Q ss_pred ceEEeeecCC--CCceEEeecCC-cEEEeeCCee--eeeeccccccceE-E---ecc-EEEEEEccCCCCCCcceEEEEe
Q psy17835 145 VSVHGAKDSQ--DRDIQLGVTAN-GLVIFHAGAR--LNLLSWVKIVKIS-F---KRK-QFFVQLKREPSENYDTLLGFNM 214 (702)
Q Consensus 145 v~~f~~kd~~--~~~i~LGV~~~-GI~v~~~~~~--~~~f~W~~I~kls-f---~~k-~F~I~~~~~~~~~~~~~~~F~~ 214 (702)
++.|.+.-.. +..+.|.|+++ ||.-.-+... ...-.+..|..|. . +.| +-.+++.-+ .....+...+
T Consensus 227 ~E~fk~~L~s~WnisveLvvGPh~Gisy~t~~~~~~t~laefkqi~sI~~c~~~eek~k~~lQlkis---ga~e~l~It~ 303 (974)
T KOG4257|consen 227 VELFKCSLGSGWNISVELVVGPHTGISYLTNERCDPTRLAEFKQIASITICKMEEEKEKTLLQLKIS---GAPEPLLITL 303 (974)
T ss_pred HHheeeecccccceeEEEEecCcccceeccCCCCChHHHHhhhhhheeEEeecccccccceeeeecc---CCCCCeEEec
Confidence 8999886544 35678999999 9987643322 3345567777776 2 222 444554422 1123477888
Q ss_pred cChHHHHHHHHHHhhcccccc
Q psy17835 215 TTYRSCKNLWKSCVEHHTFFR 235 (702)
Q Consensus 215 ~~~~~ak~Lw~~~ve~H~Ffr 235 (702)
.+-..|..+-.++-.+...|.
T Consensus 304 ssl~~aesmAdLiDGYcrL~n 324 (974)
T KOG4257|consen 304 SSLELAESMADLIDGYCRLYN 324 (974)
T ss_pred ChhhHHHHHHHHHHHHHHHHc
Confidence 898888888776655554443
No 38
>KOG3727|consensus
Probab=96.62 E-value=0.0043 Score=69.75 Aligned_cols=105 Identities=13% Similarity=0.297 Sum_probs=80.8
Q ss_pred cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEeee-cCCCCceEEeecCCcEEEee--CCeeeeeecccc
Q psy17835 107 TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGAK-DSQDRDIQLGVTANGLVIFH--AGARLNLLSWVK 183 (702)
Q Consensus 107 ~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~k-d~~~~~i~LGV~~~GI~v~~--~~~~~~~f~W~~ 183 (702)
.+.+..+|.+.|+..+.|+..||++.||+.=+.||.+|+++|=|+ +..-.+=.|||..+-|.-.+ .+..+.+.++++
T Consensus 516 sKQ~~~RILEAHqNVaQlsl~EAKLrfIQAWQSLPeFGityfivRFkGsrKeEllGVA~NRLirmDlatGd~iKTWRfsn 595 (664)
T KOG3727|consen 516 SKQITQRILEAHQNVAQLSLTEAKLRFIQAWQSLPEFGITYFIVRFKGSRKEELLGVAYNRLIRMDLATGDHIKTWRFSN 595 (664)
T ss_pred hHHHHHHHHHHhhhHhhhhhHHHHHHHHHHHhhccccCcEEEEEEecCcchHHHHhhhhhheeeeecccCCceeeeeecc
Confidence 455899999999999999999999999999999999999999885 33334456888887776654 555677888889
Q ss_pred ccceEE--eccEEEEEEccCCCCCCcceEEEEecCh
Q psy17835 184 IVKISF--KRKQFFVQLKREPSENYDTLLGFNMTTY 217 (702)
Q Consensus 184 I~klsf--~~k~F~I~~~~~~~~~~~~~~~F~~~~~ 217 (702)
|..|.- .=|...|++.+ +..+.|.|.+.
T Consensus 596 MKqWNVNWeir~v~IeF~d------ev~iaFsc~SA 625 (664)
T KOG3727|consen 596 MKQWNVNWEIRQVMIEFED------EVNIAFSCLSA 625 (664)
T ss_pred hhhhcccceeeEEEEEecc------cceEEEEeecc
Confidence 887754 45667777642 23377876553
No 39
>cd00435 ACBP Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a role in regulation of intermediary metabolism and gene regulation. The suggested role of ACBP is to act as a intracellular acyl-CoA transporter and pool former. ACBPs are present in a large group of eukaryotic species and several tissue-specific isoforms have been detected.
Probab=95.94 E-value=0.046 Score=47.84 Aligned_cols=80 Identities=19% Similarity=0.223 Sum_probs=58.7
Q ss_pred HHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCCCCCCCCcCCCCC
Q psy17835 27 YLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQ 106 (702)
Q Consensus 27 yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~~yl~~~~~~P~~ 106 (702)
|-++-..|.+-.-..+.++-+.|=||--| |..||.+.. .++.+
T Consensus 5 F~~A~~~v~~~~~~~~~~~~L~lYalyKQ--------------------------At~G~~~~~--~P~~~--------- 47 (85)
T cd00435 5 FEAAAEKVKKLKTKPSNEEKLQLYSLYKQ--------------------------ATVGDCNTE--RPGMF--------- 47 (85)
T ss_pred HHHHHHHHHhCCCCcCHHHHHHHHHHHHH--------------------------hccCCCCCC--CCCcc---------
Confidence 34445555555567789999999999999 999999743 22222
Q ss_pred cHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcc-cCCC
Q psy17835 107 TEEMELKIEELHKLHKGQSPADAEYNYLEHAKRC-EMYG 144 (702)
Q Consensus 107 ~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L-~~YG 144 (702)
+-..+.-.+.++++.||++.+|+..|++.+.++ +.||
T Consensus 48 -d~~~~~K~~AW~~l~~ms~~eA~~~YV~~~~~l~~~~~ 85 (85)
T cd00435 48 -DLKGRAKWDAWNSLKGMSKEDAMKAYIAKVEELIAKYA 85 (85)
T ss_pred -cHhhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhccC
Confidence 123344556899999999999999999999775 6665
No 40
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=95.85 E-value=0.019 Score=59.43 Aligned_cols=34 Identities=9% Similarity=0.053 Sum_probs=31.5
Q ss_pred cceeeecCCCccchhhhhHHhhhccceeEEEEee
Q psy17835 565 NRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTT 598 (702)
Q Consensus 565 ~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~ 598 (702)
-+||++-+|+..+..+|..-....+++.||-+|.
T Consensus 92 ~rfLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE 125 (241)
T PTZ00393 92 IKILILDAPTNDLLPLYIKEMKNYNVTDLVRTCE 125 (241)
T ss_pred eeEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCC
Confidence 5899999999999999999999999999999864
No 41
>PF00887 ACBP: Acyl CoA binding protein; InterPro: IPR000582 Acyl-CoA-binding protein (ACBP) is a small (10 Kd) protein that binds medium- and long-chain acyl-CoA esters with very high affinity and may function as an intracellular carrier of acyl-CoA esters []. ACBP is also known as diazepam binding inhibitor (DBI) or endozepine (EP) because of its ability to displace diazepam from the benzodiazepine (BZD) recognition site located on the GABA type A receptor. It is therefore possible that this protein also acts as a neuropeptide to modulate the action of the GABA receptor []. ACBP is a highly conserved protein of about 90 residues that is found in all four eukaryotic kingdoms, Animalia, Plantae, Fungi and Protista, and in some eubacterial species []. Although ACBP occurs as a completely independent protein, intact ACB domains have been identified in a number of large, multifunctional proteins in a variety of eukaryotic species. These include large membrane-associated proteins with N-terminal ACB domains, multifunctional enzymes with both ACB and peroxisomal enoyl-CoA Delta(3), Delta(2)-enoyl-CoA isomerase domains, and proteins with both an ACB domain and ankyrin repeats (IPR002110 from INTERPRO) []. The ACB domain consists of four alpha-helices arranged in a bowl shape with a highly exposed acyl-CoA-binding site. The ligand is bound through specific interactions with residues on the protein, most notably several conserved positive charges that interact with the phosphate group on the adenosine-3'phosphate moiety, and the acyl chain is sandwiched between the hydrophobic surfaces of CoA and the protein []. Other proteins containing an ACB domain include: Endozepine-like peptide (ELP) (gene DBIL5) from mouse []. ELP is a testis-specific ACBP homologue that may be involved in the energy metabolism of the mature sperm. MA-DBI, a transmembrane protein of unknown function which has been found in mammals. MA-DBI contains a N-terminal ACB domain. DRS-1 [], a human protein of unknown function that contains a N-terminal ACB domain and a C-terminal enoyl-CoA isomerase/hydratase domain. ; GO: 0000062 fatty-acyl-CoA binding; PDB: 2CB8_A 2FJ9_A 2LBB_A 1ST7_A 3EPY_B 2FDQ_C 1NTI_A 1HB8_A 1ACA_A 1NVL_A ....
Probab=95.30 E-value=0.056 Score=47.35 Aligned_cols=64 Identities=23% Similarity=0.247 Sum_probs=47.4
Q ss_pred cccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHHHH
Q psy17835 39 LILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELH 118 (702)
Q Consensus 39 l~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~H 118 (702)
...+.++-+.|-||.-| |..||++.. .|+.+ +-..+.=.+.+
T Consensus 19 ~~~~~~~~L~LYalyKQ--------------------------At~Gd~~~~--~P~~~----------d~~~~~K~~AW 60 (87)
T PF00887_consen 19 SQLSNDDKLELYALYKQ--------------------------ATHGDCDTP--RPGFF----------DIEGRAKWDAW 60 (87)
T ss_dssp STS-HHHHHHHHHHHHH--------------------------HHTSS--S---CTTTT----------CHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH--------------------------HHhCCCcCC--CCcch----------hHHHHHHHHHH
Confidence 47899999999999999 999999833 33333 22334446689
Q ss_pred HHhcCCCHHHHHHHHHHHhhcc
Q psy17835 119 KLHKGQSPADAEYNYLEHAKRC 140 (702)
Q Consensus 119 k~~~G~t~~eAe~~yL~~a~~L 140 (702)
+++.||++.||+..|++.+.++
T Consensus 61 ~~l~gms~~eA~~~Yi~~v~~~ 82 (87)
T PF00887_consen 61 KALKGMSKEEAMREYIELVEEL 82 (87)
T ss_dssp HTTTTTHHHHHHHHHHHHHHHH
T ss_pred HHccCCCHHHHHHHHHHHHHHH
Confidence 9999999999999999998764
No 42
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=93.14 E-value=0.1 Score=48.64 Aligned_cols=42 Identities=19% Similarity=0.354 Sum_probs=29.5
Q ss_pred EEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 657 DVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 657 ~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
...|+.+.+|++..++.....+++|+..... ..+||+|||.+
T Consensus 49 ~~~~~~~~D~~~~~~~~~~~~~~~~i~~~~~----~~~~vlVHC~~ 90 (139)
T cd00127 49 NYLYVPILDLPSQDISKYFDEAVDFIDDARE----KGGKVLVHCLA 90 (139)
T ss_pred eEEEEEceeCCCCChHHHHHHHHHHHHHHHh----cCCcEEEECCC
Confidence 4678888888866665555666777666543 24799999975
No 43
>KOG3550|consensus
Probab=91.67 E-value=0.19 Score=48.05 Aligned_cols=34 Identities=35% Similarity=0.587 Sum_probs=29.5
Q ss_pred CCCCCCCCccccCCCCCCCCceEEEeeecCC--CCC
Q psy17835 424 APDEQGRFGFNVKGGADLGMPILVVRGRRRG--GRG 457 (702)
Q Consensus 424 ~~~~~g~~~f~~~g~~~~~~~~~vs~~~~~~--~~~ 457 (702)
-|..+-..|||+-||-.|+-||-+||+.||. |+.
T Consensus 96 lpktdeglgfnvmggkeqnspiyisriipggvadrh 131 (207)
T KOG3550|consen 96 LPKTDEGLGFNVMGGKEQNSPIYISRIIPGGVADRH 131 (207)
T ss_pred cCccccccceeeccCcccCCceEEEeecCCcccccc
Confidence 4666777999999999999999999999987 553
No 44
>PTZ00458 acyl CoA binding protein; Provisional
Probab=91.21 E-value=1.5 Score=38.92 Aligned_cols=63 Identities=21% Similarity=0.201 Sum_probs=47.6
Q ss_pred ccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHHHHH
Q psy17835 40 ILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHK 119 (702)
Q Consensus 40 ~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~Hk 119 (702)
..+.++-..|=||.-| |..||.+.. .++.+ +-..+.=.+.+.
T Consensus 20 ~~s~d~~L~lYalyKQ--------------------------At~G~c~~~--~P~~~----------d~~~raKw~AW~ 61 (90)
T PTZ00458 20 NLSVEIKLDLYKYYKQ--------------------------STVGNCNIK--EPSMF----------KYQDRKKYEAWK 61 (90)
T ss_pred CCCHHHHHHHHHHHhh--------------------------hccCCCCCC--CCCcc----------cHHHHHHHHHHH
Confidence 5688889999999999 999998643 22222 112233345788
Q ss_pred HhcCCCHHHHHHHHHHHhhcc
Q psy17835 120 LHKGQSPADAEYNYLEHAKRC 140 (702)
Q Consensus 120 ~~~G~t~~eAe~~yL~~a~~L 140 (702)
++.||++.+|+..|++.+.++
T Consensus 62 ~l~~ms~~eA~~~YI~l~~~l 82 (90)
T PTZ00458 62 SIENLNREDAKKRYVEIVTEL 82 (90)
T ss_pred HcCCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999876
No 45
>KOG3784|consensus
Probab=90.60 E-value=1.5 Score=48.34 Aligned_cols=102 Identities=16% Similarity=0.228 Sum_probs=73.5
Q ss_pred ccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCCCC
Q psy17835 17 LQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGY 96 (702)
Q Consensus 17 L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~~y 96 (702)
+.....-.++|.|+-.||-.|......+..-+|-|+..|
T Consensus 206 ~d~~~~v~llY~Qav~D~~~g~~~~~~e~~~QL~slq~q----------------------------------------- 244 (407)
T KOG3784|consen 206 MDNRVAVNLLYVQAVQDIERGWVVPTKEQYDQLKSLQEE----------------------------------------- 244 (407)
T ss_pred hcCchHHHHHHHHHHHHHhcCceeechhhHHHHHHHHHh-----------------------------------------
Confidence 444555668899999999888887666655577776666
Q ss_pred CCCCcCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhcccCCCceEEee----ecCCCCceEEeecCCcEEEe--
Q psy17835 97 LSGLSLVPGQTEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCEMYGVSVHGA----KDSQDRDIQLGVTANGLVIF-- 170 (702)
Q Consensus 97 l~~~~~~P~~~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~~YGv~~f~~----kd~~~~~i~LGV~~~GI~v~-- 170 (702)
+-+.+||+.|+.|++||...|+. -.+.|..+.+-++.+-+..-
T Consensus 245 -------------------------------~~~~~fL~m~R~l~~Y~~l~f~~c~CD~p~kg~~~~~~~g~~~ll~~~t 293 (407)
T KOG3784|consen 245 -------------------------------ESMKEFLELARTLEGYGYLIFDPCVCDYPEKGTPAVISVGNHELLLACT 293 (407)
T ss_pred -------------------------------hhHHHHHHHHHhhccCCeEecCccccCCCCCCCeEEEEEcchhheeeec
Confidence 23567999999999999999853 24567777777777766654
Q ss_pred eCCe--eeeeeccccccceEEe
Q psy17835 171 HAGA--RLNLLSWVKIVKISFK 190 (702)
Q Consensus 171 ~~~~--~~~~f~W~~I~klsf~ 190 (702)
..+. ....|.|..|+.|.-.
T Consensus 294 eegq~~q~i~F~~trmr~Wrvt 315 (407)
T KOG3784|consen 294 EEGQQNQEIAFRWTRMRCWRVT 315 (407)
T ss_pred cCCCccceeEEEeeeeEeeecc
Confidence 2332 3457999999887654
No 46
>COG4281 ACB Acyl-CoA-binding protein [Lipid metabolism]
Probab=90.18 E-value=1.1 Score=37.97 Aligned_cols=78 Identities=19% Similarity=0.197 Sum_probs=58.7
Q ss_pred HHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCCCCCCCCcCCCC
Q psy17835 26 FYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPG 105 (702)
Q Consensus 26 ~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~~yl~~~~~~P~ 105 (702)
-|-|+..||-+=.-.-+.++...|-||.-| +..||-+.+. |+++..
T Consensus 5 ~Feqa~~dV~~L~~kP~~d~LLkLYAL~KQ--------------------------~s~GD~~~ek--PG~~d~------ 50 (87)
T COG4281 5 RFEQAQTDVKELSEKPSNDELLKLYALFKQ--------------------------GSVGDNDGEK--PGFFDI------ 50 (87)
T ss_pred HHHHHHHHHHHhccCCCcHHHHHHHHHHHh--------------------------ccccccCCCC--CCcccc------
Confidence 577889998775555677889999999999 9999987653 443311
Q ss_pred CcHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccc
Q psy17835 106 QTEEMELKIEELHKLHKGQSPADAEYNYLEHAKRCE 141 (702)
Q Consensus 106 ~~~~~~~~I~~~Hk~~~G~t~~eAe~~yL~~a~~L~ 141 (702)
.-+---+.|..++|.++.+|+..||..+..|.
T Consensus 51 ----~gr~K~eAW~~LKGksqedA~qeYialVeeLk 82 (87)
T COG4281 51 ----VGRYKYEAWAGLKGKSQEDARQEYIALVEELK 82 (87)
T ss_pred ----ccchhHHHHhhccCccHHHHHHHHHHHHHHHH
Confidence 01122356788999999999999999998775
No 47
>KOG3549|consensus
Probab=83.99 E-value=0.9 Score=48.98 Aligned_cols=38 Identities=21% Similarity=0.476 Sum_probs=30.9
Q ss_pred CEEEEEcCCCCCCCCccccCCCCCCCCceEEEeeecCC
Q psy17835 417 GLVLIRIAPDEQGRFGFNVKGGADLGMPILVVRGRRRG 454 (702)
Q Consensus 417 ~~~~~~~~~~~~g~~~f~~~g~~~~~~~~~vs~~~~~~ 454 (702)
+--+|.|+-...|.+|..+|||+.+++||+||++--+.
T Consensus 54 ~eRtVtirRQ~vGGlGLSIKGGaEHn~PvviSkI~kdQ 91 (505)
T KOG3549|consen 54 KERTVTIRRQKVGGLGLSIKGGAEHNLPVVISKIYKDQ 91 (505)
T ss_pred CceeEEEEeeecCcceeeeccccccCccEEeehhhhhh
Confidence 34455566667899999999999999999999987654
No 48
>KOG2836|consensus
Probab=83.15 E-value=5.1 Score=38.03 Aligned_cols=35 Identities=31% Similarity=0.414 Sum_probs=32.3
Q ss_pred cceeeecCCCccchhhhhHHhhhccceeEEEEeee
Q psy17835 565 NRYIATQGPLASTVGDFWHMLVEAGSTLVVMVTTL 599 (702)
Q Consensus 565 ~~yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~ 599 (702)
.+|++|--|...|+..|-.-.-.+++++||-.|..
T Consensus 17 MrFLIThnPtnaTln~fieELkKygvttvVRVCe~ 51 (173)
T KOG2836|consen 17 MRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEP 51 (173)
T ss_pred eEEEEecCCCchhHHHHHHHHHhcCCeEEEEeccc
Confidence 68999999999999999999999999999999853
No 49
>KOG3551|consensus
Probab=73.58 E-value=1.7 Score=47.64 Aligned_cols=54 Identities=22% Similarity=0.433 Sum_probs=39.3
Q ss_pred EEEcCCCCCCCCccccCCCCCCCCceEEEeeecCC--CCCcccccccceeeccCCc
Q psy17835 420 LIRIAPDEQGRFGFNVKGGADLGMPILVVRGRRRG--GRGAPLPIRTRVFTSRGGL 473 (702)
Q Consensus 420 ~~~~~~~~~g~~~f~~~g~~~~~~~~~vs~~~~~~--~~~~p~~i~~~~~~~~~~~ 473 (702)
.|++.-.+-|..|-.+|||-+-+|||++|++.+|- |...-|++-+-++.+||--
T Consensus 87 ~V~V~K~d~gGLGISIKGGreNkMPIlISKIFkGlAADQt~aL~~gDaIlSVNG~d 142 (506)
T KOG3551|consen 87 RVRVVKQDAGGLGISIKGGRENKMPILISKIFKGLAADQTGALFLGDAILSVNGED 142 (506)
T ss_pred eeEEEEecCCcceEEeecCcccCCceehhHhccccccccccceeeccEEEEecchh
Confidence 45555566699999999999999999999999986 6665555444444444433
No 50
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=73.52 E-value=6.2 Score=36.80 Aligned_cols=17 Identities=35% Similarity=0.388 Sum_probs=12.2
Q ss_pred hHHhhhccceeEEEEee
Q psy17835 582 WHMLVEAGSTLVVMVTT 598 (702)
Q Consensus 582 WrMVwe~~v~~IVMLt~ 598 (702)
+..+-+.+++.||-|+.
T Consensus 19 ~~~l~~~gi~~Vi~l~~ 35 (138)
T smart00195 19 LALLKKLGITHVINVTN 35 (138)
T ss_pred HHHHHHcCCCEEEEccC
Confidence 45556678888888865
No 51
>KOG0817|consensus
Probab=73.34 E-value=11 Score=36.16 Aligned_cols=68 Identities=24% Similarity=0.289 Sum_probs=50.3
Q ss_pred cCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCCCCCCCCcCCCCCcHHHHHHHHHHHHH
Q psy17835 41 LAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKPGYLSGLSLVPGQTEEMELKIEELHKL 120 (702)
Q Consensus 41 c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~~yl~~~~~~P~~~~~~~~~I~~~Hk~ 120 (702)
.+.++.++|=||-=| |..||-+.. .++++ +...+.=-+.++.
T Consensus 23 p~~ee~L~lYglyKQ--------------------------At~G~~~~~--kPg~~----------d~~~k~Kw~AW~~ 64 (142)
T KOG0817|consen 23 PSNEELLKLYGLYKQ--------------------------ATVGDCNTP--KPGFF----------DEEGKAKWQAWNS 64 (142)
T ss_pred CCHHHHHHHHHHHHh--------------------------hccCCCCCC--CCchh----------hHHHHHHHHHHHh
Confidence 577888888888889 999987654 33332 2223444456899
Q ss_pred hcCCCHHHHHHHHHHHhhcc-cCCCce
Q psy17835 121 HKGQSPADAEYNYLEHAKRC-EMYGVS 146 (702)
Q Consensus 121 ~~G~t~~eAe~~yL~~a~~L-~~YGv~ 146 (702)
+.||++++|+-.|++.+..| +.|+..
T Consensus 65 l~~~s~~eA~~~Yv~~~~~l~~~~~~~ 91 (142)
T KOG0817|consen 65 LGGMSKEEAMEAYVEKVEELIPKYGAE 91 (142)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999998775 457654
No 52
>PF00595 PDZ: PDZ domain (Also known as DHR or GLGF) Coordinates are not yet available; InterPro: IPR001478 PDZ domains are found in diverse signalling proteins in bacteria, yeasts, plants, insects and vertebrates [, ]. PDZ domains can occur in one or multiple copies and are nearly always found in cytoplasmic proteins. They bind either the carboxyl-terminal sequences of proteins or internal peptide sequences []. In most cases, interaction between a PDZ domain and its target is constitutive, with a binding affinity of 1 to 10 microns. However, agonist-dependent activation of cell surface receptors is sometimes required to promote interaction with a PDZ protein. PDZ domain proteins are frequently associated with the plasma membrane, a compartment where high concentrations of phosphatidylinositol 4,5-bisphosphate (PIP2) are found. Direct interaction between PIP2 and a subset of class II PDZ domains (syntenin, CASK, Tiam-1) has been demonstrated. PDZ domains consist of 80 to 90 amino acids comprising six beta-strands (beta-A to beta-F) and two alpha-helices, A and B, compactly arranged in a globular structure. Peptide binding of the ligand takes place in an elongated surface groove as an anti-parallel beta-strand interacts with the beta-B strand and the B helix. The structure of PDZ domains allows binding to a free carboxylate group at the end of a peptide through a carboxylate-binding loop between the beta-A and beta-B strands.; GO: 0005515 protein binding; PDB: 3AXA_A 1WF8_A 1QAV_B 1QAU_A 1B8Q_A 1MC7_A 2KAW_A 1I16_A 1VB7_A 1WI4_A ....
Probab=73.12 E-value=1.7 Score=36.79 Aligned_cols=49 Identities=20% Similarity=0.436 Sum_probs=35.7
Q ss_pred EEcCCCCCCCCccccCCCCCCC-CceEEEeeecCC--CCCcccccccceeecc
Q psy17835 421 IRIAPDEQGRFGFNVKGGADLG-MPILVVRGRRRG--GRGAPLPIRTRVFTSR 470 (702)
Q Consensus 421 ~~~~~~~~g~~~f~~~g~~~~~-~~~~vs~~~~~~--~~~~p~~i~~~~~~~~ 470 (702)
|.+.++..+.|||.++++.+.. ..+.|+.|.|++ ++.- |.+-+.++.+|
T Consensus 2 v~l~k~~~~~lG~~l~~~~~~~~~~~~V~~v~~~~~a~~~g-l~~GD~Il~IN 53 (81)
T PF00595_consen 2 VTLEKSGNGPLGFTLRGGSDNDEKGVFVSSVVPGSPAERAG-LKVGDRILEIN 53 (81)
T ss_dssp EEEEESTTSBSSEEEEEESTSSSEEEEEEEECTTSHHHHHT-SSTTEEEEEET
T ss_pred EEEEeCCCCCcCEEEEecCCCCcCCEEEEEEeCCChHHhcc-cchhhhhheeC
Confidence 5566778899999999999876 789999999997 2221 44455555433
No 53
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=69.96 E-value=6.2 Score=39.21 Aligned_cols=40 Identities=20% Similarity=0.316 Sum_probs=25.4
Q ss_pred EEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 661 MQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 661 ~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
.-+..|+|+.+|+ ...+-+++..+...... .+.|+|||-+
T Consensus 75 ~~~~~~~D~~~p~-~~~l~~~v~~i~~~~~~-g~kVvVHC~~ 114 (180)
T COG2453 75 VLHLPILDGTVPD-LEDLDKIVDFIEEALSK-GKKVVVHCQG 114 (180)
T ss_pred eeeeeecCCCCCc-HHHHHHHHHHHHHHHhc-CCeEEEEcCC
Confidence 3345678999885 35555555555544432 3499999964
No 54
>PF02174 IRS: PTB domain (IRS-1 type); InterPro: IPR002404 Insulin receptor substrate-1 proteins contain both a pleckstrin homology domain IPR001849 from INTERPRO and a phosphotyrosine binding (PTB) domain. These domains facilitate interaction with the activated tyrosine-phosphorylated insulin receptor. The PTB domain is situated towards the N terminus. Two arginines in this domain are responsible for hydrogen bonding phosphotyrosine residues on a Ac-LYASSNPApY-NH2 peptide in the juxtamembrane region of the insulin receptor. Further interactions via `bridged' water molecules are coordinated by residues an Asn and a Ser residue []. The PTB domain has a compact, 7-stranded beta-sandwich structure, capped by a C-terminal helix. The substrate peptide fits into an L-shaped surface cleft formed from the C-terminal helix and strands 5 and 6 [].; GO: 0005158 insulin receptor binding; PDB: 1XR0_B 1QQG_B 1IRS_A 2V76_D 1MK7_B 2K00_A 1MIZ_B 1MK9_B 1MIX_A 2H7E_A ....
Probab=63.42 E-value=62 Score=28.99 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=47.5
Q ss_pred CceEEeecCCcEEEee--CCeeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecCh
Q psy17835 156 RDIQLGVTANGLVIFH--AGARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTY 217 (702)
Q Consensus 156 ~~i~LGV~~~GI~v~~--~~~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~ 217 (702)
.+..|.|+...|.+.. ....+..+|+..|.+....++.|.++....-. .-+-.+.|.+++.
T Consensus 22 g~~~L~l~~~~l~L~~~~~~~~~~~Wpl~~lRryG~~~~~F~fEaGRrc~-tG~G~f~f~t~~a 84 (100)
T PF02174_consen 22 GPYLLCLTPDELILIDPQSGEPILEWPLRYLRRYGRDDGIFSFEAGRRCP-TGEGLFWFQTPDA 84 (100)
T ss_dssp EEEEEEEESSEEEEEETTTTEEEEEEEGGGEEEEEEETTEEEEEESTTST-TCSEEEEEEESTH
T ss_pred EEEEEEECCCEEEEecCCCCceEEEEEhHHhhhhccCCCEEEEEECCcCC-CCCcEEEEEeCCH
Confidence 3578999999999964 44456789999999999999999999975322 2245688988883
No 55
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=60.38 E-value=9.7 Score=37.43 Aligned_cols=36 Identities=19% Similarity=0.271 Sum_probs=17.2
Q ss_pred ECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcC
Q psy17835 663 YLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCS 701 (702)
Q Consensus 663 y~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCS 701 (702)
...|.+..++.+.+.+.+.++.+.... +.||+|||.
T Consensus 64 ~~~~~~~~~~~~~~~v~~aL~~ild~~---n~PvLiHC~ 99 (164)
T PF03162_consen 64 MSSSKDPWVPISEEQVAEALEIILDPR---NYPVLIHCN 99 (164)
T ss_dssp -----GGG----HHHHHHHHHHHH-GG---G-SEEEE-S
T ss_pred cccccCccccCCHHHHHHHHHHHhCCC---CCCEEEEeC
Confidence 333433356666778888887765543 369999995
No 56
>cd01203 DOK_PTB Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. Downstream of tyrosine kinase (DOK) Phosphotyrosine-binding domain. This domain has a PH-like fold and is similiar to the PTB domain that is found in insulin receptor substrate molecules The DOK family of eukaryotic signaling molecules have an N-terminal PH domain, followed by an IRS-like PTB domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=60.25 E-value=70 Score=29.21 Aligned_cols=72 Identities=13% Similarity=0.139 Sum_probs=52.8
Q ss_pred ceEEeecCCcEEEeeCC--eeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhh
Q psy17835 157 DIQLGVTANGLVIFHAG--ARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVE 229 (702)
Q Consensus 157 ~i~LGV~~~GI~v~~~~--~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve 229 (702)
+++|-|++..|.+.+.. ..+...||.-|.+....++.|.++-...-. .-+-.+.|.+...+.--.+....+.
T Consensus 22 ~y~L~v~~~~l~L~d~~~~~~l~~WP~~~LRryG~d~~~FsFEAGRrC~-tGeG~f~F~t~~~~~if~~v~~~i~ 95 (104)
T cd01203 22 SYMLRMGPTELQLKSEDLGATLYMWPYRFLRKYGRDKGKFSFEAGRRCT-SGEGVFTFDTTQGNEIFRAVEAAIK 95 (104)
T ss_pred eEEEEEcCCEEEEEcCCCCcEEEEeehHhhhhhcccCCEEEEEecCcCC-CCCcEEEEecCCHHHHHHHHHHHHH
Confidence 67889999999988744 446789999999999999999999865322 2245688988877655444444443
No 57
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=58.62 E-value=14 Score=36.49 Aligned_cols=111 Identities=21% Similarity=0.212 Sum_probs=45.9
Q ss_pred CceEeeeecccCCCCCcccceeeecCCCccchhhhh-------HHhhhccceeEEEEeeeeecCccccccccCCCCCeeE
Q psy17835 547 DYINANTVAMEIPGSGIVNRYIATQGPLASTVGDFW-------HMLVEAGSTLVVMVTTLVERGRTKCHKYWPSLGETLE 619 (702)
Q Consensus 547 dYINAsyI~~~i~g~~~~~~yIaTQ~Pl~~T~~DFW-------rMVwe~~v~~IVMLt~~~E~g~~kC~qYWP~~g~~~~ 619 (702)
+-|+.+|+.... .+......+|-+|--. ..|.| .-+.+++++.||.|++..|..+.+ +|+.++.
T Consensus 25 ~P~~i~~l~~s~--~~~~~~Lglt~~PG~k-~~d~~RdL~~DL~~Lk~~G~~~Vvtl~~~~EL~~l~----Vp~L~~~-- 95 (168)
T PF05706_consen 25 TPIQIDWLPLSP--VNCSGFLGLTFLPGCK-FKDWRRDLQADLERLKDWGAQDVVTLLTDHELARLG----VPDLGEA-- 95 (168)
T ss_dssp S----EEEE-GG--GT-SSEEEEES-TT-E-ETTEEB-HHHHHHHHHHTT--EEEE-S-HHHHHHTT-----TTHHHH--
T ss_pred Cceeeeeecccc--cCCcceeeeecCCCcc-cccccchHHHHHHHHHHCCCCEEEEeCcHHHHHHcC----CccHHHH--
Confidence 567777775221 1112234455555421 12222 246678999999999887754432 3432211
Q ss_pred ecCceEEEEEeeeeecCCCCEEEEEEEEEECCCCceEEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEE
Q psy17835 620 LSGGRFNISCAKEEADPSGSFVFREFVLRDSQTGEKRDVTQMQYLAWPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVH 699 (702)
Q Consensus 620 ~g~g~~~V~~~~~~~~~~~~y~~R~L~I~~~~~~~~r~Vth~qy~~WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVH 699 (702)
....+ +.. +..-+||.++| +...+.+++.++...-.. ...|+||
T Consensus 96 -------------~~~~G--------------------i~~-~h~PI~D~~aP-d~~~~~~i~~eL~~~L~~-g~~V~vH 139 (168)
T PF05706_consen 96 -------------AQARG--------------------IAW-HHLPIPDGSAP-DFAAAWQILEELAARLEN-GRKVLVH 139 (168)
T ss_dssp -------------HHHTT---------------------EE-EE----TTS----HHHHHHHHHHHHHHHHT-T--EEEE
T ss_pred -------------HHHcC--------------------CEE-EecCccCCCCC-CHHHHHHHHHHHHHHHHc-CCEEEEE
Confidence 11111 111 23467899999 466777888777654322 4689999
Q ss_pred cCC
Q psy17835 700 CSA 702 (702)
Q Consensus 700 CSA 702 (702)
|-+
T Consensus 140 C~G 142 (168)
T PF05706_consen 140 CRG 142 (168)
T ss_dssp -SS
T ss_pred CCC
Confidence 964
No 58
>cd01217 CG12581 CG12581 Phosphotyrosine-binding (PTB) domain. CG12581 Phosphotyrosine-binding (PTB) domain. PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. More recent studies have found that some types of PTB domains can bind to peptides which are not tyrosine phosphorylated or lack tyrosine residues altogether.
Probab=55.84 E-value=64 Score=31.24 Aligned_cols=78 Identities=17% Similarity=0.169 Sum_probs=47.2
Q ss_pred cCCCCceEEeecCCcEEEeeC----CeeeeeeccccccceEEe--------------------------------ccEEE
Q psy17835 152 DSQDRDIQLGVTANGLVIFHA----GARLNLLSWVKIVKISFK--------------------------------RKQFF 195 (702)
Q Consensus 152 d~~~~~i~LGV~~~GI~v~~~----~~~~~~f~W~~I~klsf~--------------------------------~k~F~ 195 (702)
+..+..-+|-|++.|+.|-.. +.....||..+|.-++-- ---|-
T Consensus 39 ~kKl~~gsL~Ics~GLrvk~s~~~~~~E~~~fP~~~i~~~aAVkfVi~~~~~~~~~~~aFLPL~t~~~ni~~~~H~PiFA 118 (158)
T cd01217 39 KKKGIDSWLSVWSNGLLLEISALAEKNETLFFPIHNLHYCAAVRFVISDGFKVDDGGAAFLPLDSPFANIPIHVHPPIFA 118 (158)
T ss_pred ccccccceEEEecCceEEEeccccccccccccccceeeEeeEEEEEeccCcccCCCcccccccCCChhhCCCcCCCCeEE
Confidence 456677899999999999752 223457887777766552 12344
Q ss_pred EEEccCCCCCCcceEEEEecChHHHHHHHHHHhhc
Q psy17835 196 VQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEH 230 (702)
Q Consensus 196 I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve~ 230 (702)
+.+|.......-+-.+|.|.+. .|..+|..|..|
T Consensus 119 ~vmR~t~~~kvLECHgFiCk~~-iAA~~~~~~m~H 152 (158)
T cd01217 119 AIMRRTTGPKVLECHGFICKST-IAANALVRCMAH 152 (158)
T ss_pred EEEecCCCCceEEeeEEEeCCH-HHHHHHHHHHHH
Confidence 4444332222223357999888 555666666544
No 59
>KOG3553|consensus
Probab=55.07 E-value=9.9 Score=34.23 Aligned_cols=45 Identities=24% Similarity=0.318 Sum_probs=32.0
Q ss_pred CCccccCCCCCCCC----------ceEEEeeecCCCCCcc-cccccceeeccCCcc
Q psy17835 430 RFGFNVKGGADLGM----------PILVVRGRRRGGRGAP-LPIRTRVFTSRGGLN 474 (702)
Q Consensus 430 ~~~f~~~g~~~~~~----------~~~vs~~~~~~~~~~p-~~i~~~~~~~~~~~~ 474 (702)
+-||++-||+||.. -|-|.+|..||.-.+. |.||+.+.++||--|
T Consensus 36 ~~GFkIGGGIDQDp~k~Pf~ytD~GiYvT~V~eGsPA~~AGLrihDKIlQvNG~Df 91 (124)
T KOG3553|consen 36 ILGFKIGGGIDQDPSKNPFSYTDKGIYVTRVSEGSPAEIAGLRIHDKILQVNGWDF 91 (124)
T ss_pred EEEEEeccccCCCcccCCCCcCCccEEEEEeccCChhhhhcceecceEEEecCcee
Confidence 46899999999754 2667778877722111 778998888887654
No 60
>KOG1720|consensus
Probab=54.74 E-value=16 Score=37.28 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=27.1
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 666 WPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 666 WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
.||.+.| ++..+.+|++.|..... .+-|.|||-|
T Consensus 123 f~Dg~tP-~~~~v~~fv~i~e~~~~--~g~iaVHCka 156 (225)
T KOG1720|consen 123 FADGSTP-TDAIVKEFVKIVENAEK--GGKIAVHCKA 156 (225)
T ss_pred cCCCCCC-CHHHHHHHHHHHHHHHh--cCeEEEEecc
Confidence 4666666 68899999999987765 4899999965
No 61
>cd00934 PTB Phosphotyrosine-binding (PTB) domain. Phosphotyrosine-binding (PTB) domain; PTB domains have a PH-like fold and are found in various eukaryotic signaling molecules. They were initially identified based upon their ability to recognize phosphorylated tyrosine residues. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. The PTB domain of SHC binds to a NPXpY sequence. More recent studies have found that some types of PTB domains such as the neuronal protein X11 and in the cell-fate determinant protein Numb can bind to peptides which are not tyrosine phosphorylated; whereas, other PTB domains can bind motifs lacking tyrosine residues altogether.
Probab=53.85 E-value=1.6e+02 Score=26.32 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=48.5
Q ss_pred cCCCCceEEeecCCcEEEeeCCe--eeeeeccccccceEEe---ccEEEEEEccCCCCCCcceEEEEecChHHHHHHHH
Q psy17835 152 DSQDRDIQLGVTANGLVIFHAGA--RLNLLSWVKIVKISFK---RKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWK 225 (702)
Q Consensus 152 d~~~~~i~LGV~~~GI~v~~~~~--~~~~f~W~~I~klsf~---~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~ 225 (702)
...+.++.|-|++.||.|.+.+. .+..|+..+|.-.+.. .+-|-+..+.... ..-.-..|.+.+. |+.|-.
T Consensus 38 ~~~~~~v~l~vs~~gv~l~d~~~~~~l~~~~l~~Is~~~~~~~~~~~F~~i~~~~~~-~~~~CHvF~c~~~--a~~i~~ 113 (123)
T cd00934 38 GEKGQKVILSVSSDGVKLIDPKTKEVLASHPIRRISFCAADPDDLRIFAFIAREPGS-SRFECHVFKCEKV--AEPIAL 113 (123)
T ss_pred ccCCCEEEEEEEcCcEEEEeCCCCcEEEeeccceEEEEECCCCCCcEEEEEEEcCCC-CcEEEEEEEeCch--HHHHHH
Confidence 35677899999999999998654 4667887777776665 4567776665432 2234467888886 554443
No 62
>cd00992 PDZ_signaling PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) polypeptides and even to lipids has been demonstrated. In this subfamily of PDZ domains an N-terminal beta-strand forms the peptide-binding groove base, a circular permutation with respect to PDZ domains found in proteases.
Probab=52.62 E-value=20 Score=29.76 Aligned_cols=49 Identities=33% Similarity=0.622 Sum_probs=34.1
Q ss_pred EEcCCCCCCCCccccCCCCCCCCceEEEeeecCC--CCCcccccccceeecc
Q psy17835 421 IRIAPDEQGRFGFNVKGGADLGMPILVVRGRRRG--GRGAPLPIRTRVFTSR 470 (702)
Q Consensus 421 ~~~~~~~~g~~~f~~~g~~~~~~~~~vs~~~~~~--~~~~p~~i~~~~~~~~ 470 (702)
+.+.+...+.+||.+.++.+....++|..|.+++ ++.. +...++++.++
T Consensus 4 ~~l~~~~~~~~G~~~~~~~~~~~~~~V~~v~~~s~a~~~g-l~~GD~I~~in 54 (82)
T cd00992 4 VTLRKDPGGGLGFSLRGGKDSGGGIFVSRVEPGGPAERGG-LRVGDRILEVN 54 (82)
T ss_pred EEEEeCCCCCcCEEEeCcccCCCCeEEEEECCCChHHhCC-CCCCCEEEEEC
Confidence 5566666789999998887656678999999988 3221 44456666443
No 63
>PF14470 bPH_3: Bacterial PH domain
Probab=50.32 E-value=1.3e+02 Score=25.78 Aligned_cols=68 Identities=13% Similarity=0.258 Sum_probs=48.4
Q ss_pred CCCceEEeecCCcEEEeeCC----eeeeeeccccccceEEec----cEEEEEEccCCCCCCcceEEEEecChHHHHHHHH
Q psy17835 154 QDRDIQLGVTANGLVIFHAG----ARLNLLSWVKIVKISFKR----KQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWK 225 (702)
Q Consensus 154 ~~~~i~LGV~~~GI~v~~~~----~~~~~f~W~~I~klsf~~----k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~ 225 (702)
....-.+.++..=|.++... .....|+|.+|..+++++ .++.|... +..+.|..-+...++.+.+
T Consensus 20 ~~~~g~l~~TnkRlif~~~~~~~~~~~~~i~y~~I~~v~~~~g~~~~~i~i~~~-------~~~~~i~~i~k~~~~~~~~ 92 (96)
T PF14470_consen 20 TSFPGVLVLTNKRLIFYSKGMFGGKKFESIPYDDITSVSFKKGILGGKITIETN-------GEKIKIDNIQKGDVKEFYE 92 (96)
T ss_pred cCceeEEEEeCCEEEEEEcccCCCceEEEEEhhheEEEEEEccccccEEEEEEC-------CEEEEEEEcCHHHHHHHHH
Confidence 34566788888888888643 346789999999999997 55555542 3446676557777777776
Q ss_pred HHh
Q psy17835 226 SCV 228 (702)
Q Consensus 226 ~~v 228 (702)
.+.
T Consensus 93 ~i~ 95 (96)
T PF14470_consen 93 YIK 95 (96)
T ss_pred HHh
Confidence 543
No 64
>PF14317 YcxB: YcxB-like protein
Probab=50.18 E-value=34 Score=26.74 Aligned_cols=37 Identities=19% Similarity=0.438 Sum_probs=29.8
Q ss_pred ecCCcEEEeeCCeeeeeeccccccceEEeccEEEEEEc
Q psy17835 162 VTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFVQLK 199 (702)
Q Consensus 162 V~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I~~~ 199 (702)
+...||.+-.+. ....++|++|.++.-.++.|.|.+.
T Consensus 1 f~~~gi~~~~~~-~~~~~~w~~i~~v~e~~~~~~l~~~ 37 (62)
T PF14317_consen 1 FDEDGIIIESGN-GSSRIPWSDIKKVVETKDYFYLYLG 37 (62)
T ss_pred CCCCEEEEEECC-eEEEEEchheEEEEEeCCEEEEEEC
Confidence 356788886543 3468999999999999999999874
No 65
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=48.59 E-value=22 Score=32.72 Aligned_cols=26 Identities=19% Similarity=0.420 Sum_probs=16.7
Q ss_pred CChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 673 DDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 673 ~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
+....+.+|++.... ..++|+|||.+
T Consensus 57 ~~~~~~~~~i~~~~~----~~~~VlVHC~~ 82 (133)
T PF00782_consen 57 EHLDQAVEFIENAIS----EGGKVLVHCKA 82 (133)
T ss_dssp GGHHHHHHHHHHHHH----TTSEEEEEESS
T ss_pred HHHHHHHHhhhhhhc----ccceeEEEeCC
Confidence 445556666665533 24799999964
No 66
>KOG3209|consensus
Probab=47.11 E-value=26 Score=41.64 Aligned_cols=54 Identities=22% Similarity=0.508 Sum_probs=40.1
Q ss_pred CCEEEEEcCCCCCCCCccccCCCCCCCCceEEEeeecCC--CCCcccccccceeecc
Q psy17835 416 EGLVLIRIAPDEQGRFGFNVKGGADLGMPILVVRGRRRG--GRGAPLPIRTRVFTSR 470 (702)
Q Consensus 416 ~~~~~~~~~~~~~g~~~f~~~g~~~~~~~~~vs~~~~~~--~~~~p~~i~~~~~~~~ 470 (702)
+++..|.++-..+| |||.++||-.-+|+|.|-|+|.+. -+|--+.|-+|++.+|
T Consensus 897 ~~~~~VelErG~kG-FGFSiRGGreynM~LfVLRlAeDGPA~rdGrm~VGDqi~eIN 952 (984)
T KOG3209|consen 897 GDLYTVELERGAKG-FGFSIRGGREYNMDLFVLRLAEDGPAIRDGRMRVGDQITEIN 952 (984)
T ss_pred CCeeEEEeeccccc-cceEeecccccccceEEEEeccCCCccccCceeecceEEEec
Confidence 56777777766644 999999999999999999999865 2332255677777444
No 67
>KOG4335|consensus
Probab=43.99 E-value=8.7 Score=43.70 Aligned_cols=66 Identities=20% Similarity=0.314 Sum_probs=49.7
Q ss_pred CCCccchHHHHHHHHHHHHHHHcCc--cccCHHHHHHHhhh-hhhcccccchhhhhhhhhhcccccccccccccCCCCCC
Q psy17835 14 PSKLQEEYTRYHFYLQIRKDILAHR--LILAPSTACLLASY-TVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPD 90 (702)
Q Consensus 14 p~~L~~e~tR~l~yLQlr~dil~gr--l~c~~~~a~~Laal-~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~ 90 (702)
+..+.+|..|++|+ -+++.|+.++ +.|..+....++|| .+= ..+|.|++-
T Consensus 214 ~~~~~ee~a~~n~e-eA~~nvl~a~~~~~~~Ve~~~~~ga~~~c~--------------------------lQ~gn~~~~ 266 (558)
T KOG4335|consen 214 LQIIDEEVARLNYE-EAKGNVLAARNKYLCDVEDCEALGALRVCR--------------------------LQLGNYQPV 266 (558)
T ss_pred hhhhHHHHHHHhHH-HHHHhHHHHhhhhhHHHHHHHHhhhhheeh--------------------------hhccCCccc
Confidence 44677777777666 7889999999 89999999999999 444 779999887
Q ss_pred CCCCCCCC----CCcCCCCC
Q psy17835 91 EHKPGYLS----GLSLVPGQ 106 (702)
Q Consensus 91 ~~~~~yl~----~~~~~P~~ 106 (702)
.+....++ ...|||.|
T Consensus 267 r~~~~gir~~~~~qs~f~~w 286 (558)
T KOG4335|consen 267 RPAACGIRLSEKLQSFFPAW 286 (558)
T ss_pred cchhhhcchHHHHHHHhHHH
Confidence 76655554 22366665
No 68
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=42.92 E-value=28 Score=31.91 Aligned_cols=20 Identities=20% Similarity=0.107 Sum_probs=11.9
Q ss_pred hHHhhhccceeEEEEeeeee
Q psy17835 582 WHMLVEAGSTLVVMVTTLVE 601 (702)
Q Consensus 582 WrMVwe~~v~~IVMLt~~~E 601 (702)
...+-+++.++||.+-...|
T Consensus 20 ~~~la~~GfktVInlRpd~E 39 (110)
T PF04273_consen 20 LAQLAAQGFKTVINLRPDGE 39 (110)
T ss_dssp HHHHHHCT--EEEE-S-TTS
T ss_pred HHHHHHCCCcEEEECCCCCC
Confidence 35677899999999976544
No 69
>cd00824 PTBI IRS-like phosphotyrosine-binding domain. IRS-like phosphotyrosine-binding domain (PTBi); This domain has a PH-like fold and is found in insulin receptor substrate molecules and in other eukaryotic signaling molecules such as FRS2 and Dok. IRS and Dok molecules have an N-terminal PH domain, which is followed by an IRS-like PTB domain. FRS2 just has an N-terminal PTBi domain. This PTBi domain is shorter than the PTB domain which is found in SHC, Numb and other proteins. The PTBi domain binds to phosphotyrosines which are in NPXpY motifs.
Probab=41.15 E-value=1.5e+02 Score=27.13 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=49.9
Q ss_pred CceEEeecCCcEEEeeCC--eeeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecC-hHHHHHHH
Q psy17835 156 RDIQLGVTANGLVIFHAG--ARLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTT-YRSCKNLW 224 (702)
Q Consensus 156 ~~i~LGV~~~GI~v~~~~--~~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~-~~~ak~Lw 224 (702)
...+|-+++..|.+++.+ ..+..+|+..|.+..+.+..|.++....-. .-+-.+.|.+.. ...+..+=
T Consensus 21 G~y~L~lt~~~l~L~~~~~~~~~~~wpl~~lRRyG~~~~~FsfEaGRrc~-tG~G~f~f~t~~~~~I~~~v~ 91 (104)
T cd00824 21 GSYRLCLTSKELTLVKLGSRVALVVWPLMFLRRYGYDSNLFSFEAGRRCV-TGEGIFTFQTDRAEEIFQNVH 91 (104)
T ss_pred eeEEEEECCCEEEEEecCCCceEEEeehHHeeecccCCCEEEEEccCcCC-CCCCEEEEEcCCHHHHHHHHH
Confidence 367899999999999866 445678888999999999999999865322 223458888883 44444443
No 70
>PF00640 PID: Phosphotyrosine interaction domain (PTB/PID) A page on PI domains.; InterPro: IPR006020 The PI domain has a similar structure to the insulin receptor substrate-1 PTB domain, a 7-stranded beta-sandwich, capped by a C-terminal helix. However, the PI domain contains an additional short N-terminal helix and a large insertion between strands 1 and 2, which forms a helix and 2 long connecting loops. The substrate peptide fits into a surface cleft formed from the C-terminal helix and strand 5 [].; GO: 0005515 protein binding; PDB: 1WGU_A 2YT0_A 2YT1_A 2YSZ_A 2ROZ_B 3SO6_A 2DYQ_A 1AQC_A 1X11_B 1WJ1_A ....
Probab=38.68 E-value=1.9e+02 Score=26.57 Aligned_cols=64 Identities=14% Similarity=0.182 Sum_probs=45.3
Q ss_pred cCCCCceEEeecCCcEEEeeC--CeeeeeeccccccceEE----eccEEEEEEccCCCCCCcceEEEEecC
Q psy17835 152 DSQDRDIQLGVTANGLVIFHA--GARLNLLSWVKIVKISF----KRKQFFVQLKREPSENYDTLLGFNMTT 216 (702)
Q Consensus 152 d~~~~~i~LGV~~~GI~v~~~--~~~~~~f~W~~I~klsf----~~k~F~I~~~~~~~~~~~~~~~F~~~~ 216 (702)
...+.++.|.|+..||.|.+. +..+..++-.+|.-++. ..+-|-......... .-.-..|.+.+
T Consensus 48 ~~~~~~V~l~vs~~gI~v~~~~t~~~l~~~~i~~Is~~~~~d~~~~~~Fafi~~~~~~~-~~~CHVF~~~~ 117 (140)
T PF00640_consen 48 KKKPQKVTLNVSSDGIKVIDPDTGEVLMSHPIRRISFCAVGDPDDKRVFAFIARDPRSS-RFYCHVFKCED 117 (140)
T ss_dssp TSTSEEEEEEEETTEEEEEETTTTCEEEEEEGGGEEEEEESSTTETTEEEEEEEETSSS-CEEEEEEEESS
T ss_pred cccCeEEEEEEcCCeEEEecCccccccccCCccceEEEEecCCCcceEEEEEeccCCCC-ccccEeeeHhh
Confidence 445678999999999999974 34467888888888888 445777654443222 23446899888
No 71
>PF10480 ICAP-1_inte_bdg: Beta-1 integrin binding protein; InterPro: IPR019517 ICAP-1 is a serine/threonine-rich protein that binds to the cytoplasmic domains of beta-1 integrins in a highly specific manner, binding to a NPXY sequence motif on the beta-1 integrin. The cytoplasmic domains of integrins are essential for cell adhesion, and the fact that phosphorylation of ICAP-1 by interaction with the cell-matrix implies an important role of ICAP-1 during integrin-dependent cell adhesion []. Over expression of ICAP-1 strongly reduces the integrin-mediated cell spreading on extracellular matrix and inhibits both Cdc42 and Rac1. In addition, ICAP-1 induces release of Cdc42 from cellular membranes and prevents the dissociation of GDP from this GTPase []. An additional function of ICAP-1 is to promote differentiation of osteoprogenitors by supporting their condensation through modulating the integrin high affinity state [].
Probab=36.95 E-value=2.4e+02 Score=28.52 Aligned_cols=93 Identities=17% Similarity=0.244 Sum_probs=61.6
Q ss_pred HHHHHHHHhhcccCCCceEEeeecCCCCceEEeecCCcEEEeeCCee--eeeecccccc-ceEEecc------EEEEEEc
Q psy17835 129 AEYNYLEHAKRCEMYGVSVHGAKDSQDRDIQLGVTANGLVIFHAGAR--LNLLSWVKIV-KISFKRK------QFFVQLK 199 (702)
Q Consensus 129 Ae~~yL~~a~~L~~YGv~~f~~kd~~~~~i~LGV~~~GI~v~~~~~~--~~~f~W~~I~-klsf~~k------~F~I~~~ 199 (702)
-..++|+.|+++ |--.|.. ...++.|+|+..||.|-+.+.. +..+|--.|. -++|... -|.+++.
T Consensus 87 ~lI~~ID~aQq~---GkLP~v~---~~eevil~VSKyGiKvt~~d~~~VL~RhpL~~Ivr~V~YdDGlG~g~~llAlK~~ 160 (200)
T PF10480_consen 87 ELINYIDSAQQD---GKLPFVP---SDEEVILSVSKYGIKVTDNDQRDVLHRHPLHEIVRMVCYDDGLGAGKNLLALKVG 160 (200)
T ss_pred HHHHHHHHHhhc---CcCCCCC---CCCeEEEEEeeccEEEeecCCcceeeeeeeeeEEEEEEEecCcCCcceEEEEEcc
Confidence 467888888763 4333322 2247889999999999986655 4578888887 4555443 2444544
Q ss_pred cCCCCCCcceEEEEecChHHHHHHHHHHh
Q psy17835 200 REPSENYDTLLGFNMTTYRSCKNLWKSCV 228 (702)
Q Consensus 200 ~~~~~~~~~~~~F~~~~~~~ak~Lw~~~v 228 (702)
....+ .-..+.|.|.+...|.-|-++..
T Consensus 161 ~~~~e-~y~l~v~Qcss~~qA~~ICk~l~ 188 (200)
T PF10480_consen 161 DERQE-EYQLWVYQCSSDEQAQEICKVLG 188 (200)
T ss_pred CCCcc-eEEEEEEEcCCHHHHHHHHHHHH
Confidence 33222 23568899999999988877653
No 72
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=36.87 E-value=31 Score=32.46 Aligned_cols=30 Identities=30% Similarity=0.334 Sum_probs=15.3
Q ss_pred CCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 671 VPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 671 vP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
||++ .+-+..+++........+.||||||+
T Consensus 76 vpDd--aI~~va~~La~~~~~~~g~iVvHtSG 105 (127)
T PF10727_consen 76 VPDD--AIAEVAEQLAQYGAWRPGQIVVHTSG 105 (127)
T ss_dssp S-CC--HHHHHHHHHHCC--S-TT-EEEES-S
T ss_pred echH--HHHHHHHHHHHhccCCCCcEEEECCC
Confidence 4543 55566666654422335789999995
No 73
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=36.55 E-value=32 Score=33.29 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=21.7
Q ss_pred eeeecCCCccchhhhhHHhhhccceeEEEEeeeeecCc
Q psy17835 567 YIATQGPLASTVGDFWHMLVEAGSTLVVMVTTLVERGR 604 (702)
Q Consensus 567 yIaTQ~Pl~~T~~DFWrMVwe~~v~~IVMLt~~~E~g~ 604 (702)
++=+-.|-.-|-.|.+.+. +.++++||=|-...|..+
T Consensus 21 lyRS~~l~~lt~~d~~~L~-~lgI~tIiDLRs~~E~~~ 57 (164)
T PF13350_consen 21 LYRSGNLSNLTEADLERLR-ELGIRTIIDLRSPTERER 57 (164)
T ss_dssp EEEES--TT--HHHHHHHH-HTT--EEEE-S-HHHHHH
T ss_pred EEecCCcCcCCHHHHHHHH-hCCCCEEEECCCcccccc
Confidence 3334455566888888888 999999999988877443
No 74
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=35.59 E-value=37 Score=32.66 Aligned_cols=34 Identities=29% Similarity=0.311 Sum_probs=19.6
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 666 WPDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 666 WPd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
.+|+.-| ++..|=.|++.++.. ..+..+++||.|
T Consensus 100 itd~~~P-~~~~iD~fi~~v~~~--p~~~~l~fhC~~ 133 (149)
T PF14566_consen 100 ITDHQAP-DPEDIDAFINFVKSL--PKDTWLHFHCQA 133 (149)
T ss_dssp E-TTS----HHHHHHHHHHHHTS---TT-EEEEE-SS
T ss_pred CCCcCCC-CHHHHHHHHHHHHhC--CCCCeEEEECCC
Confidence 3466555 467777777777765 336799999975
No 75
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=34.98 E-value=60 Score=31.76 Aligned_cols=41 Identities=22% Similarity=0.356 Sum_probs=24.2
Q ss_pred EEEECCCCCCC-CCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 660 QMQYLAWPDHG-VPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 660 h~qy~~WPd~g-vP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
||.=+.-||.| +-.....+..++..++..- ...|++|||-+
T Consensus 61 ~fnDI~~~~~g~~ap~e~Hv~~i~DF~~~wp--~~apllIHC~a 102 (172)
T COG5350 61 HFNDIAEPDDGWIAPGEAHVRAIIDFADEWP--RFAPLLIHCYA 102 (172)
T ss_pred eeccccCCCccccCCCHHHHHHHHHHHhcCc--cccceeeeecc
Confidence 33334455555 4455666655555565432 35799999964
No 76
>PRK12361 hypothetical protein; Provisional
Probab=33.66 E-value=58 Score=38.13 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=21.6
Q ss_pred CCCCCCCChHHHHHHHHHHHHHcCCCCCcEEEEcCC
Q psy17835 667 PDHGVPDDVNRFLAFTRQVRHERAGMVEPAIVHCSA 702 (702)
Q Consensus 667 Pd~gvP~~~~~~L~fl~~Vr~~~~~~~~PIVVHCSA 702 (702)
.|+..| +...+-+.++.+++.+. ..++|+|||-+
T Consensus 151 ~D~~~p-~~~~l~~a~~~i~~~~~-~~~~VlVHC~~ 184 (547)
T PRK12361 151 LDHSVP-TLAQLNQAINWIHRQVR-ANKSVVVHCAL 184 (547)
T ss_pred CCCCCC-cHHHHHHHHHHHHHHHH-CCCeEEEECCC
Confidence 366666 45666666666655443 24799999964
No 77
>KOG4335|consensus
Probab=33.60 E-value=12 Score=42.70 Aligned_cols=133 Identities=17% Similarity=0.122 Sum_probs=90.0
Q ss_pred CccchHHHHHHHHHHHHHHHcCccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCCC
Q psy17835 16 KLQEEYTRYHFYLQIRKDILAHRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKPG 95 (702)
Q Consensus 16 ~L~~e~tR~l~yLQlr~dil~grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~~ 95 (702)
.+.+...-+.+|--.|.++|.|++.......+.+|+..+| .-.+.+..++|...
T Consensus 343 ~iedp~~~~ilf~eaR~n~L~Gfy~~~~~k~v~va~i~l~--------------------------~vhv~~Ss~Kh~~~ 396 (558)
T KOG4335|consen 343 CIEDPFYGCILFHEARDNPLQGFYHRGGRKSVSVASISLE--------------------------GVHVVDSSEKHVLL 396 (558)
T ss_pred hhhchhhhhhhhhhhhhhhhccccccCCceeeehhhhhcc--------------------------cceeeccccccchh
Confidence 4555566678999999999999999998888888888888 66677776777766
Q ss_pred CCCCC--cCCCCC--cHH-----HHHHHHHHHHH---hcCCCHHHHH--HHHHHHhhcccCCCceEEeee--------cC
Q psy17835 96 YLSGL--SLVPGQ--TEE-----MELKIEELHKL---HKGQSPADAE--YNYLEHAKRCEMYGVSVHGAK--------DS 153 (702)
Q Consensus 96 yl~~~--~~~P~~--~~~-----~~~~I~~~Hk~---~~G~t~~eAe--~~yL~~a~~L~~YGv~~f~~k--------d~ 153 (702)
.+... .-.|.- +++ ++..+...++. ..|.+...|+ ..+|+.|-.++.||++++.-. |.
T Consensus 397 vl~lEelk~~~~t~~~~~~~~~wlef~~~~e~kn~n~~~gVs~ema~l~~~~~e~c~ei~~~ga~~~~pqd~ak~SpSD~ 476 (558)
T KOG4335|consen 397 VLNLEELKSWDHTSPEEEEPILWLEFDIDSEYKNVNKLLGVSSEMAELMSSLIEYCIEIPSQGAEPAGPQDSAKGSPSDH 476 (558)
T ss_pred cccHHHhcccCCCCChhhcchhhhhhhhhccccCccceechhHHHHHHHHHHHHHheeehhccccccCcccccCCCCCcc
Confidence 54332 212221 111 22224444442 2566666665 567999999999999998432 33
Q ss_pred CCCceEEeecCCcEEEeeCCee
Q psy17835 154 QDRDIQLGVTANGLVIFHAGAR 175 (702)
Q Consensus 154 ~~~~i~LGV~~~GI~v~~~~~~ 175 (702)
.-.+..|+|+ .|+.++.....
T Consensus 477 ~~~~~~vqv~-k~l~~ls~q~~ 497 (558)
T KOG4335|consen 477 SSSPAPVQVN-KGLPKLSRQGS 497 (558)
T ss_pred cccccccccc-ccchhhccchh
Confidence 3455778888 89988865543
No 78
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=30.95 E-value=67 Score=30.29 Aligned_cols=19 Identities=16% Similarity=-0.001 Sum_probs=14.4
Q ss_pred HHhhhccceeEEEEeeeee
Q psy17835 583 HMLVEAGSTLVVMVTTLVE 601 (702)
Q Consensus 583 rMVwe~~v~~IVMLt~~~E 601 (702)
..+.+.++++||-|-...|
T Consensus 21 ~~L~~~GiktVIdlR~~~E 39 (135)
T TIGR01244 21 AQAAQLGFKTVINNRPDRE 39 (135)
T ss_pred HHHHHCCCcEEEECCCCCC
Confidence 4456789999999976655
No 79
>smart00462 PTB Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain. PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.
Probab=27.84 E-value=3.7e+02 Score=24.51 Aligned_cols=75 Identities=9% Similarity=0.069 Sum_probs=47.6
Q ss_pred cCCCCceEEeecCCcEEEeeCCee--eeeeccccccceEEe---ccEEEEEEccCCCCCCcceEEEEecChH--HHHHHH
Q psy17835 152 DSQDRDIQLGVTANGLVIFHAGAR--LNLLSWVKIVKISFK---RKQFFVQLKREPSENYDTLLGFNMTTYR--SCKNLW 224 (702)
Q Consensus 152 d~~~~~i~LGV~~~GI~v~~~~~~--~~~f~W~~I~klsf~---~k~F~I~~~~~~~~~~~~~~~F~~~~~~--~ak~Lw 224 (702)
...+.++.|-|++.||.|.....+ +..|+..+|.-.+.. .+-|.+..+.... ..-.-..|.+.+.. .|..|-
T Consensus 40 ~~~~~~v~l~vs~~gv~v~~~~~~~~l~~~~l~~Isf~~~~~~~~~~F~fI~~~~~~-~~~~CHvF~c~~~a~~i~~~i~ 118 (134)
T smart00462 40 KKEPQKVILSISSRGVKLIDEDTKAVLHEHPLRRISFCAVGPDDLDVFGYIARDPGS-SRFACHVFRCEKAAEDIALAIG 118 (134)
T ss_pred cCCCCEEEEEEECCcEEEEECCCCeEEEEccccceEEEecCCCCCcEEEEEeeCCCC-CeEEEEEEEcCchHHHHHHHHH
Confidence 345678999999999999975443 678888888777766 4556555554322 22234567777642 344444
Q ss_pred HHH
Q psy17835 225 KSC 227 (702)
Q Consensus 225 ~~~ 227 (702)
+.+
T Consensus 119 ~aF 121 (134)
T smart00462 119 QAF 121 (134)
T ss_pred HHH
Confidence 333
No 80
>KOG4471|consensus
Probab=26.36 E-value=41 Score=39.32 Aligned_cols=40 Identities=13% Similarity=0.247 Sum_probs=22.5
Q ss_pred eccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHHhhcccc
Q psy17835 190 KRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSCVEHHTF 233 (702)
Q Consensus 190 ~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ve~H~F 233 (702)
..+.|-|++..+ .-.++.|.+.....|++=|---...++|
T Consensus 98 g~ns~~L~i~CK----Dmr~lR~~fk~~~q~r~~~~e~L~~~~~ 137 (717)
T KOG4471|consen 98 GENSFGLEITCK----DMRNLRCAFKQEEQCRRDWFERLNRAAF 137 (717)
T ss_pred CCcceeEEEEec----cccceeeecCcccccHHHHHHHHHHhcC
Confidence 445677776532 1234667667777777666444444444
No 81
>KOG2283|consensus
Probab=25.92 E-value=75 Score=36.24 Aligned_cols=38 Identities=21% Similarity=0.440 Sum_probs=28.0
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHHHc-CCCCCcEEEEcCC
Q psy17835 664 LAWPDHGVPDDVNRFLAFTRQVRHER-AGMVEPAIVHCSA 702 (702)
Q Consensus 664 ~~WPd~gvP~~~~~~L~fl~~Vr~~~-~~~~~PIVVHCSA 702 (702)
..||||.+|. ..-+..|.+.|..+- .....=+||||-|
T Consensus 78 ~~~~Dh~~P~-L~~l~~~c~~~~~WL~~d~~nVvvvHCk~ 116 (434)
T KOG2283|consen 78 FGFDDHNPPP-LELLCPFCKSMDNWLSEDPKNVVVVHCKA 116 (434)
T ss_pred cCCCCCCCCc-HHHHHHHHHCHHHHHhcCccceEEEEccC
Confidence 6899999994 666777777776643 3445679999954
No 82
>smart00310 PTBI Phosphotyrosine-binding domain (IRS1-like).
Probab=23.14 E-value=5e+02 Score=23.46 Aligned_cols=67 Identities=13% Similarity=0.280 Sum_probs=47.7
Q ss_pred ceEEeecCCcEEEeeCCe--eeeeeccccccceEEeccEEEEEEccCCCCCCcceEEEEecChHHHHHHHHHH
Q psy17835 157 DIQLGVTANGLVIFHAGA--RLNLLSWVKIVKISFKRKQFFVQLKREPSENYDTLLGFNMTTYRSCKNLWKSC 227 (702)
Q Consensus 157 ~i~LGV~~~GI~v~~~~~--~~~~f~W~~I~klsf~~k~F~I~~~~~~~~~~~~~~~F~~~~~~~ak~Lw~~~ 227 (702)
..+|-+++.-|.+.+.+. ....+|+..|.+..+.+..|.++....-... +-.+.|.+. .|..|+...
T Consensus 21 ~y~L~lt~~~L~L~~~~~~~~~~~wpl~~lRRyG~~~~~FsfEaGRrc~tG-~G~f~f~t~---~a~~i~~~v 89 (98)
T smart00310 21 SYRLRLTSETLVLWRLNPRVELVVWPLLSLRRYGRDKNFFFFEAGRRCVSG-PGEFTFQTV---VAQEIFQLV 89 (98)
T ss_pred eEEEEECCcEEEEEecCCCccEEEeehhHeeeecCCCCEEEEEccCcCCCC-CCEEEEEcC---cHHHHHHHH
Confidence 588999999999988433 3456777899999999999999986532222 334667743 445555543
No 83
>PF02061 Lambda_CIII: Lambda Phage CIII; InterPro: IPR013056 Bacteriophage lambda regulatory protein CIII is a small protein that plays a role in stabilising the CII transcriptional activator, via a mechanism that is not yet fully understood [, ]. Stabilised CII activates CI, the gene for the repressor protein that prevents transcription of proteins required for lytic development. The central portion of the protein is well conserved and is both necessary and sufficient for the activity of the protein []. Comparative analysis of the CIII sequence in lambda, Bacteriophage HK022 and the lambdoid Enterobacteria phage P22 has led to the suggestion that this central region assumes an amphipathic alpha-helical structure []. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=22.81 E-value=1.1e+02 Score=23.23 Aligned_cols=25 Identities=24% Similarity=0.469 Sum_probs=21.2
Q ss_pred EEEECCCCCCCCCCChHHHHHHHHH
Q psy17835 660 QMQYLAWPDHGVPDDVNRFLAFTRQ 684 (702)
Q Consensus 660 h~qy~~WPd~gvP~~~~~~L~fl~~ 684 (702)
+|++.+||--|+|.-.+++|+-+..
T Consensus 2 ~~~~AG~~~~G~~ql~ESLLdrItR 26 (45)
T PF02061_consen 2 QYAIAGWPRMGCPQLSESLLDRITR 26 (45)
T ss_pred eeeecCccccCCchhhHHHHHHHHH
Confidence 6899999999999888888886543
No 84
>PF10756 bPH_6: Bacterial PH domain; InterPro: IPR019692 Proteins in this entry are conserved in the Actinomycetales. Although several members are annotated as RbiX homologues, RbiX being a putative regulator of riboflavin biosynthesis, the function could not be confirmed. This entry also includes low molecular weight protein antigen 6.
Probab=22.24 E-value=1.3e+02 Score=25.07 Aligned_cols=38 Identities=24% Similarity=0.490 Sum_probs=29.4
Q ss_pred EEeecCCcEEEeeCCeeeeeeccccccceEEeccEEEEE
Q psy17835 159 QLGVTANGLVIFHAGARLNLLSWVKIVKISFKRKQFFVQ 197 (702)
Q Consensus 159 ~LGV~~~GI~v~~~~~~~~~f~W~~I~klsf~~k~F~I~ 197 (702)
-+-|++.||.|-.-- ....++|++|..+.+....-.+.
T Consensus 3 rv~v~~~Gl~vr~~~-rt~~vpW~~I~~v~~~~~~~~v~ 40 (73)
T PF10756_consen 3 RVEVDPDGLRVRNLF-RTRRVPWSEIAGVRFRRGRRWVR 40 (73)
T ss_pred eEEEcCCcEEEEcCc-eeEEEChHHeEEEEccCCceEEE
Confidence 356889998886544 66799999999999988876433
No 85
>KOG3878|consensus
Probab=20.75 E-value=2.6e+02 Score=30.65 Aligned_cols=67 Identities=18% Similarity=0.222 Sum_probs=49.6
Q ss_pred CccccCHHHHHHHhhhhhhcccccchhhhhhhhhhcccccccccccccCCCCCCCCCC-CCCCCCcCCCCCcHHHHHHHH
Q psy17835 37 HRLILAPSTACLLASYTVQCNTYISENFLSLEIMADTKLVWFSISAELGDYHPDEHKP-GYLSGLSLVPGQTEEMELKIE 115 (702)
Q Consensus 37 grl~c~~~~a~~Laal~lQ~~~~~~~~~~~~~~~~~~~~~~~~~~ae~GDy~~~~~~~-~yl~~~~~~P~~~~~~~~~I~ 115 (702)
..++.+.++-+.|-||--| +.+|.|+++..+. ++| +-+-....
T Consensus 49 Ka~h~~YEd~lKLial~kQ--------------------------v~~Gp~n~d~~p~~G~l----------Dv~GnDr~ 92 (469)
T KOG3878|consen 49 KAIHLSYEDNLKLIALKKQ--------------------------VALGPFNTDRAPALGVL----------DVIGNDRQ 92 (469)
T ss_pred CccCCChhhhhhhhhhHhh--------------------------hhcCCCCcccCccccee----------ecccChHH
Confidence 3457788888899999888 9999999887543 333 11233455
Q ss_pred HHHHHhcCCCHHHHHHHHHHHhhc
Q psy17835 116 ELHKLHKGQSPADAEYNYLEHAKR 139 (702)
Q Consensus 116 ~~Hk~~~G~t~~eAe~~yL~~a~~ 139 (702)
..|+.+-.|+..+|+..|....-+
T Consensus 93 ~~W~~LG~~sre~AM~~FV~Lldr 116 (469)
T KOG3878|consen 93 QHWQLLGEISREQAMEGFVDLLDR 116 (469)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHh
Confidence 667788889999999999887644
No 86
>cd05860 Ig4_SCFR Fourth immunoglobulin (Ig)-like domain of stem cell factor receptor (SCFR). Ig4_SCFR: The fourth Immunoglobulin (Ig)-like domain in stem cell factor receptor (SCFR). SCFR is organized as an extracellular component having five IG-like domains, a transmembrane segment, and a cytoplasmic portion having protein tyrosine kinase activity. SCFR and its ligand SCF are critical for normal hematopoiesis, mast cell development, melanocytes and gametogenesis. SCF binds to the second and third Ig-like domains of SCFR. This fourth Ig-like domain participates in SCFR dimerization, which follows ligand binding. Deletion of this fourth domain abolishes the ligand-induced dimerization of SCFR and completely inhibits signal transduction.
Probab=20.34 E-value=49 Score=30.01 Aligned_cols=25 Identities=28% Similarity=0.414 Sum_probs=20.6
Q ss_pred CCEEEEEcCCCCCCCCccccCCCCC
Q psy17835 416 EGLVLIRIAPDEQGRFGFNVKGGAD 440 (702)
Q Consensus 416 ~~~~~~~~~~~~~g~~~f~~~g~~~ 440 (702)
.-|-|+|+++++.|.|.|.++.+.+
T Consensus 65 S~L~L~Rlk~~E~G~YTf~a~N~~~ 89 (101)
T cd05860 65 SELHLTRLKGTEGGTYTFLVSNSDA 89 (101)
T ss_pred EEEEEeecChhhCcEEEEEEECCCC
Confidence 3499999999999999998765543
Done!