BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17845
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25162|ACH4_DROME Acetylcholine receptor subunit beta-like 2 OS=Drosophila
melanogaster GN=nAcRbeta-96A PE=2 SV=3
Length = 519
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 43/54 (79%)
Query: 13 NHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPIDIQMTRI 66
N IVEDWK+VSMVLDRFFL +FT +CV GT II Q+PSLYD +PID Q++ I
Sbjct: 447 NEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAIICQSPSLYDTRSPIDRQLSEI 500
>sp|P91766|ACH1_MANSE Acetylcholine receptor subunit alpha-like OS=Manduca sexta GN=ARA1
PE=2 SV=1
Length = 516
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 45/62 (72%)
Query: 5 QVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPIDIQMT 64
Q ++ + EDWKYV+MVLDR FL +FT A V+G+ GII QAP+LYD APID++++
Sbjct: 442 QTRKEEESTRVKEDWKYVAMVLDRPFLWIFTLAVVVGSAGIILQAPTLYDERAPIDVRLS 501
Query: 65 RI 66
I
Sbjct: 502 EI 503
>sp|P09478|ACH1_DROME Acetylcholine receptor subunit alpha-like 1 OS=Drosophila
melanogaster GN=nAcRalpha-96Aa PE=2 SV=2
Length = 567
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPIDIQMTRITQ 68
+ EDWKYV+MVLDR FL +F ACV+GT II QAPSLYD + PIDI ++I +
Sbjct: 500 VEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYDQSQPIDILYSKIAK 553
>sp|P23414|ACH1_SCHGR Acetylcholine receptor subunit alpha-L1 OS=Schistocerca gregaria
PE=2 SV=1
Length = 557
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 41/52 (78%)
Query: 17 EDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPIDIQMTRITQ 68
+DW +V+MVLDR FL +FT A ++GT I+ +AP+LYD+T PID++++ + Q
Sbjct: 497 QDWGFVAMVLDRLFLWIFTIASIVGTFAILCEAPALYDDTKPIDMELSSVAQ 548
>sp|Q9N587|ACH6_CAEEL Acetylcholine receptor subunit alpha-type unc-63 OS=Caenorhabditis
elegans GN=unc-63 PE=1 SV=2
Length = 502
Score = 64.7 bits (156), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNT 56
D ++EDWKY+S+V+DR FL FT AC GT II +APS+YDNT
Sbjct: 453 DDKQVIEDWKYISVVMDRIFLITFTFACAFGTVVIIARAPSIYDNT 498
>sp|Q23022|ACH5_CAEEL Acetylcholine receptor subunit alpha-type unc-38 OS=Caenorhabditis
elegans GN=unc-38 PE=2 SV=1
Length = 511
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%)
Query: 19 WKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPIDIQ 62
WKYV+MVLDR FL +F+ AC +GT I+ +AP+LYD PID+Q
Sbjct: 455 WKYVAMVLDRLFLLIFSIACFVGTVIILLRAPTLYDTRQPIDLQ 498
>sp|P54247|ACHX_ONCVO Acetylcholine receptor non-alpha chain (Fragment) OS=Onchocerca
volvulus PE=2 SV=1
Length = 436
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPID 60
I EDWK+V+ VLDR FL +F+ AC LGT I+FQAPSLYD I+
Sbjct: 391 IDEDWKFVARVLDRLFLLLFSIACFLGTILILFQAPSLYDTRQAIN 436
>sp|P17644|ACH2_DROME Acetylcholine receptor subunit alpha-like 2 OS=Drosophila
melanogaster GN=nAcRalpha-96Ab PE=2 SV=1
Length = 576
Score = 58.9 bits (141), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 17 EDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPIDIQMTRITQ 68
+DW +V+MV+DR FL +F A ++GT I+ +APSLYD+T ID+Q++ + +
Sbjct: 515 QDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSLYDDTKAIDVQLSDVAK 566
>sp|Q9R0W9|ACHA6_MOUSE Neuronal acetylcholine receptor subunit alpha-6 OS=Mus musculus
GN=Chrna6 PE=2 SV=2
Length = 494
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+H +TN + +DWKY++MV+DR FL VF CV GT G+ Q
Sbjct: 445 SHNETNEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 485
>sp|P26153|ACHB4_CHICK Neuronal acetylcholine receptor subunit beta-4 (Fragment) OS=Gallus
gallus GN=CHRNB4 PE=2 SV=1
Length = 470
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
++EDWKYV+MV+DR FL +F CVLGT G+ Q
Sbjct: 425 VIEDWKYVAMVVDRLFLWIFVLVCVLGTVGLFLQ 458
>sp|Q8SPU6|ACHB4_BOVIN Neuronal acetylcholine receptor subunit beta-4 OS=Bos taurus
GN=CHRNB4 PE=2 SV=1
Length = 496
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAP 58
++EDWKYV+MV+DR FL VF CVLGT G+ P L+ P
Sbjct: 451 VIEDWKYVAMVVDRLFLWVFVVVCVLGTVGLFL--PPLFQTHTP 492
>sp|Q5IS76|ACHA6_PANTR Neuronal acetylcholine receptor subunit alpha-6 OS=Pan troglodytes
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+H +T + +DWKYV+MV+DR FL VF CV GT G+ Q
Sbjct: 445 SHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
>sp|Q15825|ACHA6_HUMAN Neuronal acetylcholine receptor subunit alpha-6 OS=Homo sapiens
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+H +T + +DWKYV+MV+DR FL VF CV GT G+ Q
Sbjct: 445 SHNETKEVEDDWKYVAMVVDRVFLWVFIIVCVFGTAGLFLQ 485
>sp|P19370|ACHB2_CARAU Neuronal acetylcholine receptor subunit beta-2 (Fragment)
OS=Carassius auratus GN=chrnb2 PE=2 SV=1
Length = 459
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
D I+EDWKYV+MV+DR FL +F CV+GT G+ Q
Sbjct: 404 DDEGIIEDWKYVAMVIDRLFLWIFILVCVVGTLGLFVQ 441
>sp|P32297|ACHA3_HUMAN Neuronal acetylcholine receptor subunit alpha-3 OS=Homo sapiens
GN=CHRNA3 PE=1 SV=4
Length = 505
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+ I +DWKYV+MV+DR FL VFT C+LGT G+ Q
Sbjct: 460 EAKEIQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFLQ 497
>sp|P30926|ACHB4_HUMAN Neuronal acetylcholine receptor subunit beta-4 OS=Homo sapiens
GN=CHRNB4 PE=1 SV=2
Length = 498
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTA 57
+ +VEDWKYV+MV+DR FL VF CVLGT G+ P L+ A
Sbjct: 443 EDQSVVEDWKYVAMVVDRLFLWVFMFVCVLGTVGLFL--PPLFQTHA 487
>sp|P09484|ACHB2_CHICK Neuronal acetylcholine receptor subunit beta-2 OS=Gallus gallus
GN=CHRNB2 PE=1 SV=1
Length = 491
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTA 57
+ D + EDWKYV+MV+DR FL +F CV GT G+ Q L+ N A
Sbjct: 429 SEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQP--LFQNYA 476
>sp|Q8R493|ACHB4_MOUSE Neuronal acetylcholine receptor subunit beta-4 OS=Mus musculus
GN=Chrnb4 PE=2 SV=1
Length = 495
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAP 58
++EDWK+V+MV+DR FL VF C+LGT G+ P L+ AP
Sbjct: 450 VIEDWKFVAMVVDRLFLWVFVIVCILGTMGLFL--PPLFQIHAP 491
>sp|P48181|ACH2_CAEEL Acetylcholine receptor subunit beta-type unc-29 OS=Caenorhabditis
elegans GN=unc-29 PE=2 SV=2
Length = 493
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 17 EDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLY 53
+DWKYV+M++DR L VF V GTCGI+F AP ++
Sbjct: 434 DDWKYVAMIIDRLLLYVFFGITVGGTCGILFSAPHVF 470
>sp|P43143|ACHA6_RAT Neuronal acetylcholine receptor subunit alpha-6 OS=Rattus
norvegicus GN=Chrna6 PE=2 SV=1
Length = 493
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+H +T + +DWKY++MV+DR FL VF CV GT G+ Q
Sbjct: 444 SHNETKEVEDDWKYMAMVVDRVFLWVFIIVCVFGTVGLFLQ 484
>sp|P12392|ACHB4_RAT Neuronal acetylcholine receptor subunit beta-4 OS=Rattus norvegicus
GN=Chrnb4 PE=2 SV=1
Length = 495
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 2/44 (4%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAP 58
++EDWK+V+MV+DR FL VF C+LGT G+ P L+ AP
Sbjct: 450 VIEDWKFVAMVVDRLFLWVFVFVCILGTMGLFL--PPLFQIHAP 491
>sp|P04757|ACHA3_RAT Neuronal acetylcholine receptor subunit alpha-3 OS=Rattus
norvegicus GN=Chrna3 PE=2 SV=1
Length = 499
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNT 56
I +DWKYV+MV+DR FL VF C+LGT G+ Q D+T
Sbjct: 458 IQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLMARDDT 499
>sp|P17787|ACHB2_HUMAN Neuronal acetylcholine receptor subunit beta-2 OS=Homo sapiens
GN=CHRNB2 PE=1 SV=1
Length = 502
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+ D + EDWKYV+MV+DR FL +F CV GT G+ Q
Sbjct: 440 SEDDDQSVSEDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 480
>sp|P12390|ACHB2_RAT Neuronal acetylcholine receptor subunit beta-2 OS=Rattus norvegicus
GN=Chrnb2 PE=2 SV=2
Length = 500
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+ D + EDWKYV+MV+DR FL +F CV GT G+ Q
Sbjct: 438 SEDDDQSVREDWKYVAMVIDRLFLWIFVFVCVFGTVGMFLQ 478
>sp|Q8R4G9|ACHA3_MOUSE Neuronal acetylcholine receptor subunit alpha-3 OS=Mus musculus
GN=Chrna3 PE=2 SV=1
Length = 499
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNT 56
I +DWKYV+MV+DR FL VF C+LGT G+ Q D+T
Sbjct: 458 IQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQPLMARDDT 499
>sp|Q98880|ACHA_DANRE Acetylcholine receptor subunit alpha OS=Danio rerio GN=chrna1 PE=2
SV=1
Length = 456
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGI 45
++N+ E+WK+V+MVLD LCVF A C++GT G+
Sbjct: 411 ESNNAAEEWKFVAMVLDHILLCVFMAVCIIGTLGV 445
>sp|P09481|ACHA3_CHICK Neuronal acetylcholine receptor subunit alpha-3 OS=Gallus gallus
GN=CHRNA3 PE=2 SV=2
Length = 496
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+ I +DWKYV+MV+DR FL VF C+LGT G+ Q
Sbjct: 451 EAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 488
>sp|Q9ERK7|ACHB2_MOUSE Neuronal acetylcholine receptor subunit beta-2 OS=Mus musculus
GN=Chrnb2 PE=2 SV=1
Length = 501
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 8 THPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+ D + EDWKYV+MV+DR FL +F CV GT G+ Q
Sbjct: 439 SEDDDQSVREDWKYVAMVIDRLFLWIFVFVCVFGTIGMFLQ 479
>sp|Q07263|ACHA3_BOVIN Neuronal acetylcholine receptor subunit alpha-3 OS=Bos taurus
GN=CHRNA3 PE=2 SV=1
Length = 495
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+ I +DWKYV+MV+DR FL VF C+LGT G+ Q
Sbjct: 450 EAKEIQDDWKYVAMVIDRIFLWVFILVCILGTAGLFLQ 487
>sp|P18845|ACHA3_CARAU Neuronal acetylcholine receptor subunit alpha-3 OS=Carassius
auratus GN=chrna3 PE=2 SV=1
Length = 512
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+ +DWKYV+MV+DR FL VF CVLGT G+ Q
Sbjct: 472 VEDDWKYVAMVIDRIFLWVFVLVCVLGTLGLFLQ 505
>sp|P49581|ACHA6_CHICK Neuronal acetylcholine receptor subunit alpha-6 OS=Gallus gallus
GN=CHRNA6 PE=2 SV=1
Length = 494
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 11 DTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ 48
+T + +DWKYV+MV+DR FL VF CV GT G+ Q
Sbjct: 451 ETKEVEDDWKYVAMVIDRVFLWVFIILCVFGTAGLFIQ 488
>sp|Q27218|ACH7_CAEEL Acetylcholine receptor subunit beta-type lev-1 OS=Caenorhabditis
elegans GN=lev-1 PE=1 SV=1
Length = 507
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 12 TNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYD 54
T +DWK+++ V+DRF L F A V GT GIIF APS+++
Sbjct: 437 TKQFRDDWKFIASVVDRFLLYGFFGATVGGTIGIIFTAPSVFE 479
>sp|Q19AE6|ACHA4_MUSPF Neuronal acetylcholine receptor subunit alpha-4 OS=Mustela putorius
furo GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL VF C+LGT G+
Sbjct: 587 VKEDWKYVAMVIDRIFLWVFVIVCLLGTAGLFL 619
>sp|P20420|ACHA5_RAT Neuronal acetylcholine receptor subunit alpha-5 OS=Rattus
norvegicus GN=Chrna5 PE=2 SV=1
Length = 452
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 4 RQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLY 53
R VV D +VEDWK+++ VLDR FL F ++GT G+ P +Y
Sbjct: 389 RHVVKENDVREVVEDWKFIAQVLDRMFLWTFLLVSIIGTLGLF--VPVIY 436
>sp|Q2MKA5|ACHA5_MOUSE Neuronal acetylcholine receptor subunit alpha-5 OS=Mus musculus
GN=Chrna5 PE=2 SV=1
Length = 467
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 4 RQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLY 53
R VV D +VEDWK+++ VLDR FL F ++GT G+ P +Y
Sbjct: 404 RHVVKENDVREVVEDWKFIAQVLDRMFLWTFLLVSIIGTLGLF--VPVIY 451
>sp|P48182|ACR2_CAEEL Acetylcholine receptor subunit beta-type acr-2 OS=Caenorhabditis
elegans GN=acr-2 PE=2 SV=1
Length = 575
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 17 EDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYD 54
+DWKYV+MVLDR L +F + GT GII AP ++D
Sbjct: 516 DDWKYVAMVLDRLILLIFFGVTLGGTLGIICSAPHVFD 553
>sp|P43681|ACHA4_HUMAN Neuronal acetylcholine receptor subunit alpha-4 OS=Homo sapiens
GN=CHRNA4 PE=1 SV=2
Length = 627
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 587 VKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 619
>sp|Q5IS77|ACHA4_PANTR Neuronal acetylcholine receptor subunit alpha-4 OS=Pan troglodytes
GN=CHRNA4 PE=2 SV=1
Length = 627
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 587 VKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 619
>sp|P09483|ACHA4_RAT Neuronal acetylcholine receptor subunit alpha-4 OS=Rattus
norvegicus GN=Chrna4 PE=1 SV=3
Length = 630
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 591 VKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 623
>sp|O70174|ACHA4_MOUSE Neuronal acetylcholine receptor subunit alpha-4 OS=Mus musculus
GN=Chrna4 PE=2 SV=2
Length = 629
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 589 VKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 621
>sp|P09480|ACHA2_CHICK Neuronal acetylcholine receptor subunit alpha-2 OS=Gallus gallus
GN=CHRNA2 PE=2 SV=1
Length = 528
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSL 52
+ EDWKYV+MV+DR FL +F C+LGT G +F P L
Sbjct: 488 VKEDWKYVAMVIDRIFLWMFIIVCLLGTVG-LFLPPYL 524
>sp|P49579|ACHB_XENLA Acetylcholine receptor subunit beta (Fragment) OS=Xenopus laevis
GN=chrnb1 PE=2 SV=1
Length = 489
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 3 GRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQA 49
+Q+ D + + EDW+YV+MV+DR FL F A LGT I A
Sbjct: 432 AQQLQEQEDYDTLKEDWQYVAMVVDRLFLWTFIAFTSLGTLSIFLDA 478
>sp|P09482|ACHA4_CHICK Neuronal acetylcholine receptor subunit alpha-4 OS=Gallus gallus
GN=CHRNA4 PE=1 SV=1
Length = 622
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C+LGT G+
Sbjct: 582 VKEDWKYVAMVIDRIFLWMFIIVCLLGTVGLFL 614
>sp|Q5IS52|ACHA2_PANTR Neuronal acetylcholine receptor subunit alpha-2 OS=Pan troglodytes
GN=CHRNA2 PE=2 SV=1
Length = 529
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 489 VKEDWKYVAMVIDRIFLWLFIIVCFLGTIGLFL 521
>sp|Q8SPU7|ACHA5_BOVIN Neuronal acetylcholine receptor subunit alpha-5 OS=Bos taurus
GN=CHRNA5 PE=2 SV=1
Length = 475
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 4 RQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLY 53
R V+ D +VEDWK+++ VLDR FL F V+G+ G+ P +Y
Sbjct: 412 RHVMKETDVREVVEDWKFIAQVLDRMFLWTFLLVSVVGSLGLF--VPVIY 459
>sp|Q15822|ACHA2_HUMAN Neuronal acetylcholine receptor subunit alpha-2 OS=Homo sapiens
GN=CHRNA2 PE=1 SV=2
Length = 529
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 489 VKEDWKYVAMVIDRIFLWLFIIVCFLGTIGLFL 521
>sp|Q91X60|ACHA2_MOUSE Neuronal acetylcholine receptor subunit alpha-2 OS=Mus musculus
GN=Chrna2 PE=2 SV=1
Length = 512
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 472 VKEDWKYVAMVVDRIFLWLFIIVCFLGTIGLFL 504
>sp|P18257|ACHN3_CARAU Neuronal acetylcholine receptor subunit non-alpha-3 OS=Carassius
auratus PE=2 SV=1
Length = 466
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNT 56
+V+DWK+V+ VLDR FL VF A VLGT I A +Y +T
Sbjct: 425 VVQDWKFVAQVLDRIFLWVFLTASVLGTILIFTPALHMYLST 466
>sp|P12389|ACHA2_RAT Neuronal acetylcholine receptor subunit alpha-2 OS=Rattus
norvegicus GN=Chrna2 PE=2 SV=2
Length = 511
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 15 IVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIF 47
+ EDWKYV+MV+DR FL +F C LGT G+
Sbjct: 471 VKEDWKYVAMVVDRIFLWLFIIVCFLGTIGLFL 503
>sp|P04755|ACH3_DROME Acetylcholine receptor subunit beta-like 1 OS=Drosophila
melanogaster GN=nAcRbeta-64B PE=2 SV=1
Length = 521
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 17 EDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYD 54
EDWKYV+MV+DR L +F GT GI+ AP +++
Sbjct: 470 EDWKYVAMVIDRLQLYIFFIVTTAGTVGILMDAPHIFE 507
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.139 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,192,291
Number of Sequences: 539616
Number of extensions: 1011010
Number of successful extensions: 2113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2023
Number of HSP's gapped (non-prelim): 92
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)