Query         psy17845
Match_columns 81
No_of_seqs    115 out of 486
Neff          6.0 
Searched_HMMs 29240
Date          Sat Aug 17 00:29:55 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy17845.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17845hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 1oed_B Acetylcholine receptor   99.7 2.9E-18 9.9E-23  123.1   2.3   55    1-55    194-248 (250)
  2 1oed_C Acetylcholine receptor   99.7 1.3E-18 4.6E-23  125.5  -0.2   55    1-55    204-258 (260)
  3 1oed_E Acetylcholine receptor   99.7 4.9E-18 1.7E-22  122.5   0.5   54    1-54    204-257 (260)
  4 4aq5_E Acetylcholine receptor   99.6 2.3E-17   8E-22  126.6  -0.1   59    1-59    421-479 (488)
  5 4aq5_C Acetylcholine receptor   99.6 4.2E-17 1.4E-21  126.1   0.6   60    1-60    449-508 (522)
  6 4aq5_B Acetylcholine receptor   99.6 2.3E-16 7.9E-21  121.2   0.1   58    1-58    434-491 (493)
  7 1oed_A Acetylcholine receptor   99.5 1.7E-15 5.9E-20  107.4   1.9   49    1-49    171-219 (227)
  8 4aq5_A Acetylcholine receptor   99.4 1.5E-14 5.2E-19  110.4   0.1   52    1-52    405-456 (461)
  9 2bg9_B Acetylcholine receptor   99.3 2.1E-13 7.3E-18  100.9   0.4   58    2-59    312-369 (370)
 10 2bg9_C Acetylcholine receptor   99.2 8.7E-13   3E-17   97.6   0.7   55    2-56    314-368 (369)
 11 2bg9_E Acetylcholine receptor   99.1 5.3E-12 1.8E-16   93.3   0.4   53    2-54    316-368 (370)
 12 2bg9_A Acetylcholine receptor   98.9 8.2E-11 2.8E-15   86.9   0.1   47    2-48    315-361 (370)
 13 2ksr_A Neuronal acetylcholine   98.3   3E-07   1E-11   62.3   3.7   35   18-53    128-162 (164)
 14 2lly_A Neuronal acetylcholine   97.7 2.6E-05   9E-10   51.1   3.2   31   23-54    106-136 (137)
 15 2ljb_A M2 protein, BM2 protein  23.4      43  0.0015   16.8   1.5   18   15-32     15-32  (35)

No 1  
>1oed_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 2k58_B
Probab=99.70  E-value=2.9e-18  Score=123.13  Aligned_cols=55  Identities=33%  Similarity=0.621  Sum_probs=31.4

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccccC
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDN   55 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~~   55 (81)
                      +|++|+|++|+++++++|||+||||+||+|||+|++++++||++|++++|+.+++
T Consensus       194 ~Ia~~~~~~d~~~~~~~dWk~vAmVlDRlfL~iF~i~~i~gT~~I~l~ap~~~~~  248 (250)
T 1oed_B          194 YIAEQLESASEFDDLKKDWQYVAMVADRLFLYVFFVICSIGTFSIFLDASHNVPP  248 (250)
T ss_dssp             ----------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCC
Confidence            4899999999999999999999999999999999999999999999999998764


No 2  
>1oed_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1a11_A 1cek_A 1eq8_A
Probab=99.69  E-value=1.3e-18  Score=125.47  Aligned_cols=55  Identities=22%  Similarity=0.269  Sum_probs=31.1

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccccC
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDN   55 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~~   55 (81)
                      +|++|+|++|+++++++|||+||||+||+|||+|++++++||++|++++|+.+++
T Consensus       204 ~Ia~~~~~~d~~~~~~~dWk~vAmVlDRlfL~iF~i~~i~gT~~I~l~ap~~~~~  258 (260)
T 1oed_C          204 YIVKQIKEKNAYDEEVGNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNHPP  258 (260)
T ss_dssp             ----------------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC
Confidence            4899999999999999999999999999999999999999999999999988654


No 3  
>1oed_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1
Probab=99.67  E-value=4.9e-18  Score=122.51  Aligned_cols=54  Identities=15%  Similarity=0.226  Sum_probs=30.4

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCcccc
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYD   54 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~   54 (81)
                      +|++|+|++|+++++++|||+||||+||+|||+|++++++||++|++++|+.++
T Consensus       204 ~Ia~~~~~~d~~~~~~~dWk~vAmVlDRlfL~iF~i~~i~gT~~I~l~ap~~~~  257 (260)
T 1oed_E          204 FIAKSTKEQNDSGSENENWVLIGKVIDKACFWIALLLFSIGTLAIFLTGHFNQV  257 (260)
T ss_dssp             ----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccc
Confidence            489999999999999999999999999999999999999999999999998754


No 4  
>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E
Probab=99.63  E-value=2.3e-17  Score=126.56  Aligned_cols=59  Identities=17%  Similarity=0.247  Sum_probs=52.2

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccccCCCcc
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPI   59 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~~~~~~   59 (81)
                      +|++|+|+||+++++++|||+||||+||+|||+|++++++||++|+++++..+..+.|+
T Consensus       421 ~ia~~~~~~~~~~~~~~dWk~va~V~DR~~l~~f~~~~~~gt~~i~~~~~~~~~~~~p~  479 (488)
T 4aq5_E          421 FIAKSTKEQNDSGSENENWVLIGKVIDKACFWIALLLFSLGTLAIFLTGHLNQVPEFPF  479 (488)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC---
T ss_pred             HHHHHHhhhhHHhhhhhcceEEEeeHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Confidence            48999999999999999999999999999999999999999999999988765554444


No 5  
>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C
Probab=99.62  E-value=4.2e-17  Score=126.10  Aligned_cols=60  Identities=22%  Similarity=0.313  Sum_probs=53.3

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccccCCCccc
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPID   60 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~~~~~~~   60 (81)
                      +|++|+|+||+++++++|||+||||+||+|||+|++++++||++|+++++..+..+.|+.
T Consensus       449 ~ia~~~~~~~~~~~~~~dWk~va~V~DRl~l~~f~~~~~~gt~~i~~~~~~~~~~~~p~~  508 (522)
T 4aq5_C          449 YIVKQIKEKNAYDEEVGNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAKPFE  508 (522)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCC---
T ss_pred             HHHHHHhhhhhhhhhccceeEeeeeHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCCC
Confidence            378999999999999999999999999999999999999999999999988766655554


No 6  
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=99.56  E-value=2.3e-16  Score=121.17  Aligned_cols=58  Identities=31%  Similarity=0.642  Sum_probs=52.6

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccccCCCc
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAP   58 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~~~~~   58 (81)
                      +|++|+|+|++++++++|||+||+|+||+|||+|++++++||++|++++|+.+.++.|
T Consensus       434 ~i~~~~~~~~~~~~~~~dWk~va~V~DR~~l~~f~~~~~~gt~~i~~~~~~~~~~~~p  491 (493)
T 4aq5_B          434 YIAEQLESASEFDDLKKDWQYVAMVADRLFLYIFITMCSIGTFSIFLDASHNVPPDNP  491 (493)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHTTHHHHHHHHHHHHHSSSSTT
T ss_pred             HHHHHHHhhhHhhhhhcceEEEEEehhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Confidence            3789999999999999999999999999999999999999999999998876554433


No 7  
>1oed_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1dxz_A 3mra_A 2k59_B
Probab=99.53  E-value=1.7e-15  Score=107.43  Aligned_cols=49  Identities=31%  Similarity=0.756  Sum_probs=25.8

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcC
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQA   49 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~   49 (81)
                      .|++|++++|+++++++|||++|+|+||+|||+|+++++++|++|++++
T Consensus       171 ~I~~~~~~~~~~~~~~~dWk~vA~VlDRl~l~iF~~~~i~gT~~i~~~~  219 (227)
T 1oed_A          171 YIAEHMKSDEESSNAAEEWKYVAMVIDHILLCVFMLICIIGTVSVFAGR  219 (227)
T ss_dssp             ----------------------CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence            4789999999999999999999999999999999999999999999873


No 8  
>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A
Probab=99.42  E-value=1.5e-14  Score=110.39  Aligned_cols=52  Identities=29%  Similarity=0.669  Sum_probs=48.5

Q ss_pred             CcchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCcc
Q psy17845          1 MNGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSL   52 (81)
Q Consensus         1 ~i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~   52 (81)
                      +|++|+|+|++++++++|||+||+|+||+|||+|++++++||++|+++++..
T Consensus       405 ~i~~~~~~~~~~~~~~~dWk~va~v~Dr~~l~~f~~~~~~gt~~i~~~~~~~  456 (461)
T 4aq5_A          405 YIAEHMKSDEESSNAAEEWKYVAMVIDHILLCVFMLICIIGTVSVFAGRLIE  456 (461)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhHHHHhhhhhheeeeeeHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            3789999999999999999999999999999999999999999999986543


No 9  
>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=99.31  E-value=2.1e-13  Score=100.91  Aligned_cols=58  Identities=31%  Similarity=0.649  Sum_probs=53.8

Q ss_pred             cchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccccCCCcc
Q psy17845          2 NGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNTAPI   59 (81)
Q Consensus         2 i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~~~~~~   59 (81)
                      |++|++++++.++.++||+++|+|+||+|+|+|.++++++|+++++++|+.++++.|+
T Consensus       312 i~~~~~~~~~~~~~~~~W~~~a~v~Dr~~~~~f~~~~~~~t~~i~~~~~~~~~~~~~~  369 (370)
T 2bg9_B          312 IAEQLESASEFDDLKKDWQYVAMVADRLFLYIFITMCSIGTFSIFLDASHNVPPDNPF  369 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGCCC
T ss_pred             HHHHHHhhhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCC
Confidence            6789999999999999999999999999999999999999999999999998776654


No 10 
>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=99.24  E-value=8.7e-13  Score=97.59  Aligned_cols=55  Identities=22%  Similarity=0.277  Sum_probs=51.4

Q ss_pred             cchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccccCC
Q psy17845          2 NGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYDNT   56 (81)
Q Consensus         2 i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~~~   56 (81)
                      |++|++++++.++.++||+++|+|+||+|+|+|.++++++|+++++++|+.++++
T Consensus       314 i~~~~~~~~~~~~~~~~W~~~a~vlDr~~~~~f~~~~~~~~~~i~~~~~~~~~~~  368 (369)
T 2bg9_C          314 IVKQIKEKNAYDEEVGNWNLVGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPA  368 (369)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence            6789999999999999999999999999999999999999999999999987654


No 11 
>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=99.14  E-value=5.3e-12  Score=93.27  Aligned_cols=53  Identities=17%  Similarity=0.232  Sum_probs=49.4

Q ss_pred             cchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCcccc
Q psy17845          2 NGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLYD   54 (81)
Q Consensus         2 i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~   54 (81)
                      |++|++++++.++.++||+++|+|+||+|+|+|.++++++|++|++++|+.++
T Consensus       316 i~~~~~~~~~~~~~~~~W~~~a~vlDr~~~~~f~~~~~~~t~~i~~~~~~~~~  368 (370)
T 2bg9_E          316 IAKSTKEQNDSGSENENWVLIGKVIDKACFWIALLLFSLGTLAIFLTGHLNQV  368 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccC
Confidence            57889999999999999999999999999999999999999999999988754


No 12 
>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=98.95  E-value=8.2e-11  Score=86.89  Aligned_cols=47  Identities=32%  Similarity=0.794  Sum_probs=44.4

Q ss_pred             cchhcccCccchhhhhchhhhHhhHHHHHHHHHHHHHHhhhhHhhhc
Q psy17845          2 NGRQVVTHPDTNHIVEDWKYVSMVLDRFFLCVFTAACVLGTCGIIFQ   48 (81)
Q Consensus         2 i~eh~k~~d~~~~~~~eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~   48 (81)
                      |++|++++++.++.++||+++|+|+||+|+|+|.++++++|++++++
T Consensus       315 i~~~~~~~~~~~~~~~~W~~~a~vlDr~~~~~f~~~~~~~t~~i~~~  361 (370)
T 2bg9_A          315 IAEHMKSDEESSNAAEEWKYVAMVIDHILLCVFMLICIIGTVSVFAG  361 (370)
T ss_dssp             HHHHHHHHHHHHHHHHHTTSCSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            67889999999999999999999999999999999999999999975


No 13 
>2ksr_A Neuronal acetylcholine receptor subunit beta-2; nicotinic acetylcholine receptors, transmembrane domain, HFI junction, cell membrane; NMR {Homo sapiens} PDB: 2lm2_A
Probab=98.35  E-value=3e-07  Score=62.32  Aligned_cols=35  Identities=46%  Similarity=0.881  Sum_probs=31.9

Q ss_pred             chhhhHhhHHHHHHHHHHHHHHhhhhHhhhcCCccc
Q psy17845         18 DWKYVSMVLDRFFLCVFTAACVLGTCGIIFQAPSLY   53 (81)
Q Consensus        18 eWk~vA~ViDRlfl~if~~~~~~~t~~i~~~~p~~~   53 (81)
                      .+|++|+|+||+|+|+|.++++++|++++++ |..+
T Consensus       128 ~~k~~a~v~Dr~~l~~f~~~~~~~t~~i~~~-p~~~  162 (164)
T 2ksr_A          128 GGGYVAMVIDRLFLWIFVFVCVFGTIGMFLQ-PLFQ  162 (164)
T ss_dssp             SSSSTTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSC
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHheec-cccc
Confidence            3599999999999999999999999999998 7764


No 14 
>2lly_A Neuronal acetylcholine receptor subunit alpha-4; transmembrane domain, transport PROT; NMR {Homo sapiens}
Probab=97.68  E-value=2.6e-05  Score=51.12  Aligned_cols=31  Identities=39%  Similarity=0.741  Sum_probs=28.2

Q ss_pred             HhhHHHHHHHHHHHHHHhhhhHhhhcCCcccc
Q psy17845         23 SMVLDRFFLCVFTAACVLGTCGIIFQAPSLYD   54 (81)
Q Consensus        23 A~ViDRlfl~if~~~~~~~t~~i~~~~p~~~~   54 (81)
                      ++|+||+|+|+|.++++.||++++++ |+.++
T Consensus       106 ~~~~dr~~lwif~~~~~~gt~~i~~~-p~~~~  136 (137)
T 2lly_A          106 GGGIDRIFLWMFIIVCLLGTVGLFLP-PWLAG  136 (137)
T ss_dssp             SSSHHHHHHHHHHHHHHHHHHHHHCC-STTTC
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhheec-ccccC
Confidence            58999999999999999999999999 87654


No 15 
>2ljb_A M2 protein, BM2 protein chimera; M2 channel, transport protein; NMR {Influenza a virus} PDB: 2ljc_A*
Probab=23.42  E-value=43  Score=16.84  Aligned_cols=18  Identities=6%  Similarity=0.195  Sum_probs=13.0

Q ss_pred             hhhchhhhHhhHHHHHHH
Q psy17845         15 IVEDWKYVSMVLDRFFLC   32 (81)
Q Consensus        15 ~~~eWk~vA~ViDRlfl~   32 (81)
                      +..-+.++.-++||+|+.
T Consensus        15 IigiLHlilWildrLff~   32 (35)
T 2ljb_A           15 IIGILHFIAWTIGHLNQI   32 (35)
T ss_dssp             HHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHhhhhHhh
Confidence            345567777888998864


Done!