BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17848
(363 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/345 (55%), Positives = 237/345 (68%), Gaps = 61/345 (17%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
++ R+VSAV+ FG++ K+ERN+DQA++PDNT AQK+ +LLGL +T+ ++A L PRIKVG
Sbjct: 319 SMLRMVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVG 378
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD+V K+QTKEQ +FA+EA++KA YER+FRWLV R+NR+LDR+ RQGASF+GI
Sbjct: 379 RDYVQKAQTKEQ-------ADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGI 431
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIF+LNSFEQLCINYTNEKLQQLFNHTMF+LEQEEYQREGI W F+DFGLDLQP
Sbjct: 432 LDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQP 491
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
ID ++
Sbjct: 492 CID----------------------------------------------------LIERP 499
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAIVHYAGKVD 306
P G++ALLDEECWFPKATD+SFVEK+ Q H KF++ R ADF+++HYAGKVD
Sbjct: 500 ANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVD 559
Query: 307 YSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQ 350
Y A +WLMKNMDPLN+NV +LL S D A IWKD E IVG+ Q
Sbjct: 560 YKANEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQ 604
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 237/350 (67%), Gaps = 67/350 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+I R+VS+V+ G++ FK+ERN+DQAS+PDNT AQK+ L+G+++T+ T++ L PRIKVG
Sbjct: 350 SILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVG 409
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQGASF+GI
Sbjct: 410 RDVVQKAQTKEQ-------ADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGI 462
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIFE+NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FIDFGLDLQP
Sbjct: 463 LDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQP 522
Query: 188 TIDLIDKPM---GIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAI 243
I+LI++P G++ALLDEECWFPKATD SFVEKL+Q HAKF+K+ + +F I
Sbjct: 523 CIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCI 582
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAG 303
+HYAGK + W K
Sbjct: 583 LHYAGK-----VTYNASAWLTK-------------------------------------- 599
Query: 304 KVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQQA 352
NMDPLN+NV SLL S D FVA +WKD + IVG+ Q A
Sbjct: 600 ------------NMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMA 637
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 375 bits (964), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 237/350 (67%), Gaps = 67/350 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+I R+VS+V+ G++ FK+ERN+DQAS+PDNT AQK+ L+G+++T+ T++ L PRIKVG
Sbjct: 350 SILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVG 409
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQGASF+GI
Sbjct: 410 RDVVQKAQTKEQ-------ADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGI 462
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIFE+NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FIDFGLDLQP
Sbjct: 463 LDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQP 522
Query: 188 TIDLIDKPM---GIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAI 243
I+LI++P G++ALLDEECWFPKATD SFVEKL+Q HAKF+K+ + +F I
Sbjct: 523 CIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCI 582
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAG 303
+HYAGK + W K
Sbjct: 583 LHYAGK-----VTYNASAWLTK-------------------------------------- 599
Query: 304 KVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQQA 352
NMDPLN+NV SLL S D FVA +WKD + IVG+ Q A
Sbjct: 600 ------------NMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMA 637
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 237/350 (67%), Gaps = 67/350 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+I R+VS+V+ G++ FK+ERN+DQAS+PDNT AQK+ L+G+++T+ T++ L PRIKVG
Sbjct: 350 SILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVG 409
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQGASF+GI
Sbjct: 410 RDVVQKAQTKEQ-------ADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGI 462
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIFE+NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FIDFGLDLQP
Sbjct: 463 LDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQP 522
Query: 188 TIDLIDKPM---GIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAI 243
I+LI++P G++ALLDEECWFPKATD SFVEKL+Q HAKF+K+ + +F I
Sbjct: 523 CIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCI 582
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAG 303
+HYAGK + W K
Sbjct: 583 LHYAGK-----VTYNASAWLTK-------------------------------------- 599
Query: 304 KVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQQA 352
NMDPLN+NV SLL S D FVA +WKD + IVG+ Q A
Sbjct: 600 ------------NMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMA 637
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 237/350 (67%), Gaps = 67/350 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+I R+VS+V+ G++ FK+ERN+DQAS+PDNT AQK+ L+G+++T+ T++ L PRIKVG
Sbjct: 350 SILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVG 409
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQGASF+GI
Sbjct: 410 RDVVQKAQTKEQ-------ADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGI 462
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIFE+NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FIDFGLDLQP
Sbjct: 463 LDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQP 522
Query: 188 TIDLIDKPM---GIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAI 243
I+LI++P G++ALLDEECWFPKATD SFVEKL+Q HAKF+K+ + +F I
Sbjct: 523 CIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCI 582
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAG 303
+HYAGK + W K
Sbjct: 583 LHYAGK-----VTYNASAWLTK-------------------------------------- 599
Query: 304 KVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQQA 352
NMDPLN+NV SLL S D FVA +WKD + IVG+ Q A
Sbjct: 600 ------------NMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMA 637
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 375 bits (962), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/350 (53%), Positives = 237/350 (67%), Gaps = 67/350 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+I R+VS+V+ G++ FK+ERN+DQAS+PDNT AQK+ L+G+++T+ T++ L PRIKVG
Sbjct: 350 SILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVG 409
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQGASF+GI
Sbjct: 410 RDVVQKAQTKEQ-------ADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGI 462
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIFE+NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FIDFGLDLQP
Sbjct: 463 LDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQP 522
Query: 188 TIDLIDKPM---GIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAI 243
I+LI++P G++ALLDEECWFPKATD SFVEKL+Q HAKF+K+ + +F I
Sbjct: 523 CIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCI 582
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAG 303
+HYAGK + W K
Sbjct: 583 LHYAGK-----VTYNASAWLTK-------------------------------------- 599
Query: 304 KVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQQA 352
NMDPLN+NV SLL S D FVA +WKD + IVG+ Q A
Sbjct: 600 ------------NMDPLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMA 637
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 372 bits (956), Expect = e-103, Method: Compositional matrix adjust.
Identities = 186/350 (53%), Positives = 235/350 (67%), Gaps = 67/350 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+I R+VS+V+ G++ FK+ERN+DQAS+PDNT AQK+ L+G+++T+ T++ L PRIKVG
Sbjct: 350 SILRVVSSVLQLGNIVFKKERNTDQASMPDNTAAQKVCHLMGINVTDFTRSILTPRIKVG 409
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V K+QTKEQ +FA+EA++KA +ER+FRW++ R+N++LD+TKRQGASF+GI
Sbjct: 410 RDVVQKAQTKEQ-------ADFAIEALAKAKFERLFRWILTRVNKALDKTKRQGASFLGI 462
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIFE+NSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEW FIDFGLDLQP
Sbjct: 463 LDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQP 522
Query: 188 TIDLIDKPM---GIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKT-DFRGVADFAI 243
I+LI++P G++ALLDEECWFPKATD SFVEKL+Q HAKF+K+ + +F I
Sbjct: 523 CIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKTEFCI 582
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAG 303
+HYAGK + W K D
Sbjct: 583 LHYAGK-----VTYNASAWLTKNMD----------------------------------- 602
Query: 304 KVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE-IVGMAQQA 352
PLN+NV SLL S D FVA +WKD + IVG+ Q A
Sbjct: 603 ---------------PLNDNVTSLLNQSSDKFVADLWKDVDRIVGLDQMA 637
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 267 bits (682), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 148/329 (44%), Positives = 198/329 (60%), Gaps = 69/329 (20%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTV-AQKIAKLLGLSITEMTKAFLKPRIKV 66
+++++ A+M FG+M+FK ++ +QA PD T A K A L+GL+ ++ K PR+KV
Sbjct: 348 SMYKLTGAIMHFGNMKFKLKQREEQAE-PDGTEEADKSAYLMGLNSADLLKGLCHPRVKV 406
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G ++VTK Q +Q V +A A++KA YERMF W+V RIN +L+ TK+ FIG
Sbjct: 407 GNEYVTKGQNVQQ-------VIYATGALAKAVYERMFNWMVTRINATLE-TKQPRQYFIG 458
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCIN+TNEKLQQ FNH MF+LEQEEY++EGIEW FIDFG+DLQ
Sbjct: 459 VLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLQ 518
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKT-DFRGV--ADFA 242
IDLI+KPMGIM++L+EEC FPKATD +F KL +H + A F+K + +G A F+
Sbjct: 519 ACIDLIEKPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKPRNIKGKPEAHFS 578
Query: 243 IVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 302
++HYA G+ D+ I+
Sbjct: 579 LIHYA--------------------------------------------GIVDYNII--- 591
Query: 303 GKVDYSAEKWLMKNMDPLNENVVSLLQVS 331
WL KN DPLNE VV L Q S
Sbjct: 592 --------GWLQKNKDPLNETVVGLYQKS 612
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 265 bits (678), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/246 (55%), Positives = 176/246 (71%), Gaps = 14/246 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNT-VAQKIAKLLGLSITEMTKAFLKPRIKV 66
AI+++ AVM +G+++FKQ++ +QA PD T VA K A L+GL+ E+ KA PR+KV
Sbjct: 347 AIYKLTGAVMHYGNLKFKQKQREEQAE-PDGTEVADKAAYLMGLNSAELLKALCYPRVKV 405
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G +FVTK QT Q V +V A++KA YE+MF W+V RIN+ LD TK+ FIG
Sbjct: 406 GNEFVTKGQTVSQ-------VHNSVGALAKAVYEKMFLWMVIRINQQLD-TKQPRQYFIG 457
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCIN+TNEKLQQ FNH MF+LEQEEY++EGIEW+FIDFG+DL
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLA 517
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH----SQHAKFKKTDFRGVADFA 242
I+LI+KPMGI ++L+EEC FPKATD SF KL H + K K + A F+
Sbjct: 518 ACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFS 577
Query: 243 IVHYAG 248
+VHYAG
Sbjct: 578 LVHYAG 583
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 202/345 (58%), Gaps = 71/345 (20%)
Query: 7 RAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKV 66
+++F+ ++++ G M+FKQ +QA A+K+A L G++ ++ KA LKP++KV
Sbjct: 346 QSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKV 405
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G + VTK Q N N+V +V A++K+ Y+RMF WLV R+N++LD TK + +IG
Sbjct: 406 GTEMVTKGQ-------NMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLD-TKAKRNYYIG 457
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MFILEQEEY++EGI W+FIDFG+DLQ
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 517
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-----FRGVAD 240
IDLI+KPMGI+++L+EEC FPKA D+SF +KL Q+H ++ F K +G A
Sbjct: 518 MCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAH 577
Query: 241 FAIVHYAGK-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIV 299
F + HYAG P I W K D
Sbjct: 578 FELHHYAGNVPYSITG------WLEKNKD------------------------------- 600
Query: 300 HYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE 344
P+NENVV+LL S++P VA ++K E
Sbjct: 601 -------------------PINENVVALLGASKEPLVAELFKAPE 626
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 263 bits (671), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 202/345 (58%), Gaps = 71/345 (20%)
Query: 7 RAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKV 66
+++F+ ++++ G M+FKQ +QA A+K+A L G++ ++ KA LKP++KV
Sbjct: 341 QSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKV 400
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G + VTK Q N N+V +V A++K+ Y+RMF WLV R+N++LD TK + +IG
Sbjct: 401 GTEMVTKGQ-------NMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLD-TKAKRNYYIG 452
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MFILEQEEY++EGI W+FIDFG+DLQ
Sbjct: 453 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 512
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-----FRGVAD 240
IDLI+KPMGI+++L+EEC FPKA D+SF +KL Q+H ++ F K +G A
Sbjct: 513 MCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAH 572
Query: 241 FAIVHYAGK-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIV 299
F + HYAG P I W K D
Sbjct: 573 FELHHYAGNVPYSITG------WLEKNKD------------------------------- 595
Query: 300 HYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE 344
P+NENVV+LL S++P VA ++K E
Sbjct: 596 -------------------PINENVVALLGASKEPLVAELFKAPE 621
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 263 bits (671), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 202/345 (58%), Gaps = 71/345 (20%)
Query: 7 RAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKV 66
+++F+ ++++ G M+FKQ +QA A+K+A L G++ ++ KA LKP++KV
Sbjct: 346 QSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKV 405
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G + VTK Q N N+V +V A++K+ Y+RMF WLV R+N++LD TK + +IG
Sbjct: 406 GTEMVTKGQ-------NMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLD-TKAKRNYYIG 457
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MFILEQEEY++EGI W+FIDFG+DLQ
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 517
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-----FRGVAD 240
IDLI+KPMGI+++L+EEC FPKA D+SF +KL Q+H ++ F K +G A
Sbjct: 518 MCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAH 577
Query: 241 FAIVHYAGK-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIV 299
F + HYAG P I W K D
Sbjct: 578 FELHHYAGNVPYSITG------WLEKNKD------------------------------- 600
Query: 300 HYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE 344
P+NENVV+LL S++P VA ++K E
Sbjct: 601 -------------------PINENVVALLGASKEPLVAELFKAPE 626
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 263 bits (671), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 202/345 (58%), Gaps = 71/345 (20%)
Query: 7 RAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKV 66
+++F+ ++++ G M+FKQ +QA A+K+A L G++ ++ KA LKP++KV
Sbjct: 342 QSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKV 401
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G + VTK Q N N+V +V A++K+ Y+RMF WLV R+N++LD TK + +IG
Sbjct: 402 GTEMVTKGQ-------NMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLD-TKAKRNYYIG 453
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MFILEQEEY++EGI W+FIDFG+DLQ
Sbjct: 454 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 513
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-----FRGVAD 240
IDLI+KPMGI+++L+EEC FPKA D+SF +KL Q+H ++ F K +G A
Sbjct: 514 MCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAH 573
Query: 241 FAIVHYAGK-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIV 299
F + HYAG P I W K D
Sbjct: 574 FELHHYAGNVPYSITG------WLEKNKD------------------------------- 596
Query: 300 HYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE 344
P+NENVV+LL S++P VA ++K E
Sbjct: 597 -------------------PINENVVALLGASKEPLVAELFKAPE 622
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 263 bits (671), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/345 (42%), Positives = 202/345 (58%), Gaps = 71/345 (20%)
Query: 7 RAIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKV 66
+++F+ ++++ G M+FKQ +QA A+K+A L G++ ++ KA LKP++KV
Sbjct: 346 QSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKV 405
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G + VTK Q N N+V +V A++K+ Y+RMF WLV R+N++LD TK + +IG
Sbjct: 406 GTEMVTKGQ-------NMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLD-TKAKRNYYIG 457
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MFILEQEEY++EGI W+FIDFG+DLQ
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQ 517
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-----FRGVAD 240
IDLI+KPMGI+++L+EEC FPKA D+SF +KL Q+H ++ F K +G A
Sbjct: 518 MCIDLIEKPMGILSILEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAH 577
Query: 241 FAIVHYAGK-PMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIV 299
F + HYAG P I W K D
Sbjct: 578 FELHHYAGNVPYSITG------WLEKNKD------------------------------- 600
Query: 300 HYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAE 344
P+NENVV+LL S++P VA ++K E
Sbjct: 601 -------------------PINENVVALLGASKEPLVAELFKAPE 626
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 254 bits (648), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 15/259 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
++F+ ++++ G M+FKQ +QA A+K+A L G++ ++ KA LKP++KVG
Sbjct: 349 SMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVG 408
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
+ VTK Q +Q V +V A+SK+ Y+RMF WLV R+NR+LD TK + +IG+
Sbjct: 409 TEMVTKGQNLQQ-------VINSVGALSKSLYDRMFNWLVKRVNRTLD-TKAKRNYYIGV 460
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MF+LEQEEY++EGI+W+FIDFG+DLQ
Sbjct: 461 LDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGMDLQM 520
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-----FRGVADF 241
IDLI+KPMGI+++L+EEC FPKA D+SF + Q+H ++ F K +G A F
Sbjct: 521 CIDLIEKPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQGHAHF 580
Query: 242 AIVHYAGK-PMGIMALLDE 259
+ HYAG P I LD+
Sbjct: 581 ELHHYAGNVPYSIAGWLDK 599
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 253 bits (647), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 144/340 (42%), Positives = 202/340 (59%), Gaps = 62/340 (18%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
++++ ++ G M++KQ +QA A+K+A LLG++ ++ K LKP+IKVG
Sbjct: 352 SMYKCTGCILHLGEMKWKQR--GEQAEADGTAEAEKVAFLLGVNAGDLLKCLLKPKIKVG 409
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
++VT+ + K+Q V ++ A++K+ Y+RMF WLV R+N++LD TK + FIG+
Sbjct: 410 TEYVTQGRNKDQ-------VTNSIAALAKSLYDRMFNWLVRRVNQTLD-TKAKRQFFIGV 461
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MF+LEQEEY++EGI W+FIDFGLDLQ
Sbjct: 462 LDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIVWEFIDFGLDLQA 521
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVHY 246
I+LI+KPMGI+++L+EEC FPKA+D SF KL +H ++ F
Sbjct: 522 CIELIEKPMGILSILEEECMFPKASDTSFKNKLYDNHLGKNPMF---------------- 565
Query: 247 AGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYAGKVD 306
GKP PKA A F + G ++I AG
Sbjct: 566 -GKPKP-----------PKAG------------CAEAHFCLHHYAGSVSYSI---AG--- 595
Query: 307 YSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIV 346
WL KN DP+NENVV LLQ S++P V ++ I+
Sbjct: 596 -----WLDKNKDPINENVVELLQNSKEPIVKMLFTPPRIL 630
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 253 bits (647), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/259 (49%), Positives = 179/259 (69%), Gaps = 15/259 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
++F+ ++++ G M+FKQ +QA A+K+A L G++ ++ KA LKP++KVG
Sbjct: 348 SMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVG 407
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
+ VTK Q +Q V +V A+SK+ Y+RMF WLV R+NR+LD TK + +IG+
Sbjct: 408 TEMVTKGQNLQQ-------VINSVGALSKSLYDRMFNWLVKRVNRTLD-TKAKRNYYIGV 459
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+AGFEIF+ NSFEQLCINYTNE+LQQ FNH MF+LEQEEY++EGI+W+FIDFG+DLQ
Sbjct: 460 LDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEFIDFGMDLQM 519
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTD-----FRGVADF 241
IDLI+KPMGI+++L+EEC FPKA D+SF + Q+H ++ F K +G A F
Sbjct: 520 CIDLIEKPMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQGHAHF 579
Query: 242 AIVHYAGK-PMGIMALLDE 259
+ HYAG P I LD+
Sbjct: 580 ELHHYAGNVPYSIAGWLDK 598
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 163/246 (66%), Gaps = 14/246 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNT-VAQKIAKLLGLSITEMTKAFLKPRIKV 66
AI+ + AVM +G+++F Q + +QA PD T VA A L+GL+ E+ KA PR+ V
Sbjct: 347 AIYXLTGAVMHYGNLKFXQXQREEQAE-PDGTEVADXAAYLMGLNSAELLKALCYPRVGV 405
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G + VT +T ++V +V A++ A YE MF W+V RIN+ LD TK+ FIG
Sbjct: 406 GNEAVTXGETV-------SEVHNSVGALAXAVYEXMFLWMVIRINQQLD-TKQPRQYFIG 457
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCIN+TNE LQQ FNH MF+LEQEEY EGIEW+FIDFG+DL
Sbjct: 458 VLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLA 517
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH----SQHAKFKKTDFRGVADFA 242
I+LI+ PMGI ++L+EEC FPKATD SF L H + K K + A F+
Sbjct: 518 ACIELIEXPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFS 577
Query: 243 IVHYAG 248
+VHYAG
Sbjct: 578 LVHYAG 583
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 239 bits (610), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 163/246 (66%), Gaps = 14/246 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNT-VAQKIAKLLGLSITEMTKAFLKPRIKV 66
AI+ + AVM +G+++F Q + +QA PD T VA A L+GL+ E+ KA PR+ V
Sbjct: 350 AIYXLTGAVMHYGNLKFXQXQREEQAE-PDGTEVADXAAYLMGLNSAELLKALCYPRVGV 408
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
G + VT +T ++V +V A++ A YE MF W+V RIN+ LD TK+ FIG
Sbjct: 409 GNEAVTXGETV-------SEVHNSVGALAXAVYEXMFLWMVIRINQQLD-TKQPRQYFIG 460
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+AGFEIF+ NSFEQLCIN+TNE LQQ FNH MF+LEQEEY EGIEW+FIDFG+DL
Sbjct: 461 VLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEFIDFGMDLA 520
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH----SQHAKFKKTDFRGVADFA 242
I+LI+ PMGI ++L+EEC FPKATD SF L H + K K + A F+
Sbjct: 521 ACIELIEXPMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAEAHFS 580
Query: 243 IVHYAG 248
+VHYAG
Sbjct: 581 LVHYAG 586
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 214 bits (546), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 354 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 413 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 463
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 464 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 523
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 524 TID----------LID-------------------------------------------G 530
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 531 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 588
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 589 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 637
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 342 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 401 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 451
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 452 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 511
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 512 TID----------LID-------------------------------------------G 518
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 519 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 576
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 577 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 354 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 413 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 463
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 464 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 523
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 524 TID----------LID-------------------------------------------G 530
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 531 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 588
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 589 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 637
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 342 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 401 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 451
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 452 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 511
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 512 TID----------LID-------------------------------------------G 518
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 519 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 576
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 577 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 342 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 401 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 451
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 452 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 511
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 512 TID----------LID-------------------------------------------G 518
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 519 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 576
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 577 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 354 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 413 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 463
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 464 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 523
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 524 TID----------LID-------------------------------------------G 530
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 531 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 588
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 589 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 637
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 214 bits (544), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 354 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 412
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 413 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 463
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 464 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 523
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 524 TID----------LID-------------------------------------------G 530
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 531 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 588
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 589 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 637
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+ GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 342 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 401 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVIKINNVLCQERK--AYFIGV 451
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 452 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 511
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 512 TID----------LID-------------------------------------------G 518
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 519 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 576
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 577 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 342 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 401 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 451
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+ GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 452 LDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 511
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 512 TID----------LID-------------------------------------------G 518
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 519 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 576
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 577 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+ GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+ GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 185/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCEERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD+ GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 453 LDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 128/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 342 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 400
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 401 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVIKINNVLCQERK--AYFIGV 451
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF LEQEEY +E I W FIDFGLD Q
Sbjct: 452 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQA 511
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 512 TID----------LID-------------------------------------------G 518
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 519 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 576
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 577 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 625
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 185/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVL--CSERAAYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF +EQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 187/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L + ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCQERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF +EQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCSERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF +EQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCSERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF +EQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 127/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F ++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKF-EKGAGEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCSERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF +EQEEY +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 126/349 (36%), Positives = 186/349 (53%), Gaps = 67/349 (19%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPRIKVG 67
+IF+I++ ++ G+++F++ + A L D T + + G++ + + KA ++PRI G
Sbjct: 343 SIFKIIAGILHLGNIKFEKGA-GEGAVLKDKTALNAASTVFGVNPSVLEKALMEPRILAG 401
Query: 68 RDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIGI 127
RD V + E K + +A+ KA Y R+F WLV +IN L ++ A FIG+
Sbjct: 402 RDLVAQHLNVE-------KSSSSRDALVKALYGRLFLWLVKKINNVLCSERK--AYFIGV 452
Query: 128 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQP 187
LD++GFEIF++NSFEQLCINYTNEKLQQ FNH MF +EQE+Y +E I W FIDFGLD Q
Sbjct: 453 LDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKINWTFIDFGLDSQA 512
Query: 188 TIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHYA 247
TID L+D
Sbjct: 513 TID----------LID-------------------------------------------G 519
Query: 248 GKPMGIMALLDEECWFPKATDRSFVEKLVQSH--SQHAKFKKTDFRGVADFAIVHYAGKV 305
+P GI+ALLDE+ FP ATD + + KL SH ++AK+++ F +F + HYAG+V
Sbjct: 520 RQPPGILALLDEQSVFPNATDNTLITKL-HSHFSKKNAKYEEPRFSKT-EFGVTHYAGQV 577
Query: 306 DYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIVGMAQQAMS 354
Y + WL KN DPL +++ + S D V ++ D I A++ +
Sbjct: 578 MYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASRAKKGAN 626
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 142/244 (58%), Gaps = 13/244 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI-AKLLGLSITEMTKAFLKPRIKV 66
IFRI++ ++ G+++F R+SD ++P I L+G+ EM ++
Sbjct: 324 GIFRILAGILHLGNVEFAS-RDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLAT 382
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
+ K +K A +A++K Y +F W+V+ +N++L T +Q SFIG
Sbjct: 383 ATETYIKPISKLHAIN-------ARDALAKHIYANLFNWIVDHVNKALHSTVKQ-HSFIG 434
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+ GFE FE+NSFEQ CINY NEKLQQ FN +F LEQEEY +E I W IDF D Q
Sbjct: 435 VLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDF-YDNQ 493
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVH 245
P I+LI+ MG++ LLDEEC PK +D ++ +KL +H ++ A F+K A F I H
Sbjct: 494 PCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKA-FIIKH 552
Query: 246 YAGK 249
+A K
Sbjct: 553 FADK 556
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVHYAGKVDYSA 309
MG++ LLDEEC PK +D ++ +KL +H ++ A F+K A F I H+A KV+Y
Sbjct: 503 MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKA-FIIKHFADKVEYQC 561
Query: 310 EKWLMKNMDPLNENVVSLLQVSQ 332
E +L KN D + E + +L+ S+
Sbjct: 562 EGFLEKNKDTVYEEQIKVLKSSK 584
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 171 bits (432), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 142/244 (58%), Gaps = 13/244 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI-AKLLGLSITEMTKAFLKPRIKV 66
IFRI++ ++ G+++F R+SD ++P I L+G+ EM ++
Sbjct: 324 GIFRILAGILHLGNVEFAS-RDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLAT 382
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
+ K +K A +A++K Y +F W+V+ +N++L T +Q SFIG
Sbjct: 383 ATETYIKPISKLHAIN-------ARDALAKHIYANLFNWIVDHVNKALHSTVKQ-HSFIG 434
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+ GFE FE+NSFEQ CINY NEKLQQ FN +F LEQEEY +E I W IDF D Q
Sbjct: 435 VLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDF-YDNQ 493
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVH 245
P I+LI+ MG++ LLDEEC PK +D ++ +KL +H ++ A F+K A F I H
Sbjct: 494 PCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKA-FIIKH 552
Query: 246 YAGK 249
+A K
Sbjct: 553 FADK 556
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVHYAGKVDYSA 309
MG++ LLDEEC PK +D ++ +KL +H ++ A F+K A F I H+A KV+Y
Sbjct: 503 MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKA-FIIKHFADKVEYQC 561
Query: 310 EKWLMKNMDPLNENVVSLLQVSQ 332
E +L KN D + E + +L+ S+
Sbjct: 562 EGFLEKNKDTVYEEQIKVLKSSK 584
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 142/244 (58%), Gaps = 13/244 (5%)
Query: 8 AIFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI-AKLLGLSITEMTKAFLKPRIKV 66
IFRI++ ++ G+++F R+SD ++P I L+G+ EM ++
Sbjct: 324 GIFRILAGILHLGNVEFAS-RDSDSCAIPPKHDPLTIFCDLMGVDYEEMAHWLCHRKLAT 382
Query: 67 GRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGASFIG 126
+ K +K A +A++K Y +F W+V+ +N++L T +Q SFIG
Sbjct: 383 ATETYIKPISKLHAIN-------ARDALAKHIYANLFNWIVDHVNKALHSTVKQH-SFIG 434
Query: 127 ILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQ 186
+LD+ GFE FE+NSFEQ CINY NEKLQQ FN +F LEQEEY +E I W IDF D Q
Sbjct: 435 VLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDF-YDNQ 493
Query: 187 PTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVH 245
P I+LI+ MG++ LLDEEC PK +D ++ +KL +H ++ A F+K A F I H
Sbjct: 494 PCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKA-FIIKH 552
Query: 246 YAGK 249
+A K
Sbjct: 553 FADK 556
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSH-SQHAKFKKTDFRGVADFAIVHYAGKVDYSA 309
MG++ LLDEEC PK +D ++ +KL +H ++ A F+K A F I H+A KV+Y
Sbjct: 503 MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKA-FIIKHFADKVEYQC 561
Query: 310 EKWLMKNMDPLNENVVSLLQVSQD-PFVAHIWKDAE 344
E +L KN D + E + +L+ S+ + +++D E
Sbjct: 562 EGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEE 597
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 150 bits (378), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 162/342 (47%), Gaps = 68/342 (19%)
Query: 8 AIFRIVSAVMLFGSMQF----KQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 63
+I+RI++A++ G++ F +Q + + D A L ++ A
Sbjct: 265 SIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRS 324
Query: 64 IKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGAS 123
I G V K + + N+ ++ +A++KA YER+F WLV++IN ++ T +G
Sbjct: 325 ISTG---VGKRCSVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEKGP- 380
Query: 124 FIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGL 183
IGILD+ GFE+F+ NSFEQL IN+ NEKLQQLF EQEEY REGIEWK I++
Sbjct: 381 VIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEY-F 439
Query: 184 DLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAI 243
+ +P +L +EK
Sbjct: 440 NNKPICEL-------------------------IEK------------------------ 450
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQS-----HSQHAKFKKTDFRGVADFAI 298
KP+G+++LLDE C K+TD++F++ + + H Q K G F +
Sbjct: 451 -----KPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRL 505
Query: 299 VHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIW 340
HYAG V Y +L KN D L +++S +Q S DP V ++
Sbjct: 506 KHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLF 547
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 161/342 (47%), Gaps = 68/342 (19%)
Query: 8 AIFRIVSAVMLFGSMQF----KQERNSDQASLPDNTVAQKIAKLLGLSITEMTKAFLKPR 63
+I+RI++A++ G++ F +Q + + D A L ++ A
Sbjct: 265 SIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKSLAAAASCLKTDQQSLSIALCYRS 324
Query: 64 IKVGRDFVTKSQTKEQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQGAS 123
I G V K + N+ ++ +A++KA YER+F WLV++IN ++ T +G
Sbjct: 325 ISTG---VGKRCEVISVPMDCNQAAYSRDALAKALYERLFNWLVSKINTIINCTTEKGP- 380
Query: 124 FIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGL 183
IGILD+ GFE+F+ NSFEQL IN+ NEKLQQLF EQEEY REGIEWK I++
Sbjct: 381 VIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEY-F 439
Query: 184 DLQPTIDLIDKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAI 243
+ +P +L +EK
Sbjct: 440 NNKPICEL-------------------------IEK------------------------ 450
Query: 244 VHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQS-----HSQHAKFKKTDFRGVADFAI 298
KP+G+++LLDE C K+TD++F++ + + H Q K G F +
Sbjct: 451 -----KPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHLQSYVVSKDRSIGDTCFRL 505
Query: 299 VHYAGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIW 340
HYAG V Y +L KN D L +++S +Q S DP V ++
Sbjct: 506 KHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLVQGLF 547
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 163/342 (47%), Gaps = 61/342 (17%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 346 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 404
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 405 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 458
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 459 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 517
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADF 241
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H +
Sbjct: 518 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLS---------- 567
Query: 242 AIVHYAGKPMGIMALLDEECWFPKATDRSFVEKLVQSHSQHAKFKKTDFRGVADFAIVHY 301
P+ + + E + R F I H+
Sbjct: 568 ---------------------IPRKSKLAIHENI---------------RDDEGFIIRHF 591
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 592 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 633
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 337 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 395
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 396 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 449
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 450 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 508
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 509 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 568
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 569 RNIRDDEGFIIRHFAG 584
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 523 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 582
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 583 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 624
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 333 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 391
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 392 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 445
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 446 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 504
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 505 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 564
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 565 RNIRDDEGFIIRHFAG 580
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 519 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 578
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 579 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 620
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 346 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 404
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 405 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 458
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 459 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 517
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 518 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 577
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 578 RNIRDDEGFIIRHFAG 593
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 532 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 591
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 592 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 633
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 334 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 392
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 393 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 446
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 447 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 505
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 506 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 565
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 566 RNIRDDEGFIIRHFAG 581
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 520 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 579
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 580 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 621
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 310 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 368
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 369 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 422
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 423 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 481
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 482 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 541
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 542 RNIRDDEGFIIRHFAG 557
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 496 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 555
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 556 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 597
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 311 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 369
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 370 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 423
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 424 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 482
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 483 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 542
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 543 RNIRDDEGFIIRHFAG 558
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 497 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 556
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 557 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 598
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 336 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 394
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 395 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 448
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 449 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 507
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 508 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 567
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 568 RNIRDDEGFIIRHFAG 583
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 522 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 581
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 582 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 623
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 310 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 368
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 369 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 422
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 423 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 481
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 482 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 541
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 542 RNIRDDEGFIIRHFAG 557
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 496 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 555
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 556 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 597
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 336 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 394
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 395 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 448
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 449 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 507
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 508 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 567
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 568 RNIRDDEGFIIRHFAG 583
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 522 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 581
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 582 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 623
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 336 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 394
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 395 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 448
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 449 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 507
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 508 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 567
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 568 RNIRDDEGFIIRHFAG 583
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 522 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 581
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 582 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 623
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 136/256 (53%), Gaps = 24/256 (9%)
Query: 9 IFRIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKI---AKLLGLSITEMTKAFLKPRIK 65
+FR+V+ V+ G++ F++ ++ N Q + A+LLGL ++ + L R+
Sbjct: 337 LFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQDDL-RVSLTTRVM 395
Query: 66 VGRDFVTKSQTKEQWFKNDNKVE---FAVEAISKACYERMFRWLVNRINRSLDRTKRQGA 122
+ T K K KVE A +A++K Y +F +VNR+N+ +
Sbjct: 396 L----TTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCF--PFETSS 449
Query: 123 SFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFG 182
FIG+LD+AGFE FE NSFEQ CINY NEKLQQ FN + EQE YQ+EG+ + +
Sbjct: 450 YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY- 508
Query: 183 LDLQPTIDLID-KPMGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDF 235
+D Q IDLI+ + +GI+ +LDEE P+ +D+ F + Q H H K K
Sbjct: 509 VDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIH 568
Query: 236 RGVAD---FAIVHYAG 248
R + D F I H+AG
Sbjct: 569 RNIRDDEGFIIRHFAG 584
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 251 MGIMALLDEECWFPKATDRSFVEKLVQSHSQH------AKFKKTDFRGVAD---FAIVHY 301
+GI+ +LDEE P+ +D+ F + Q H H K K R + D F I H+
Sbjct: 523 VGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHF 582
Query: 302 AGKVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA 343
AG V Y +++ KN D L+ ++ SL+ S+D F+ +++ +
Sbjct: 583 AGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFESS 624
>pdb|3AAP|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
Pneumophila
pdb|3AAQ|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
Pneumophila In Complex With The Inhibitor Arl 67156
pdb|3AAR|A Chain A, Crystal Structure Of Lp1ntpdase From Legionella
Pneumophila In Complex With Amppnp
Length = 353
Score = 31.2 bits (69), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 18/117 (15%)
Query: 67 GRDFVTKSQTK------EQWFKNDNKVEFAVEAISKACYERMFRWLVNRINRSLDRTKRQ 120
G + +SQ K E WF+ ++ + E +F WL +N LD K
Sbjct: 80 GMRLLPQSQQKKYYDELEYWFRQQSQWQLVEAKTITGNDEALFDWLA--VNYKLDTLKSV 137
Query: 121 GASFIGILDMAGFEI---------FELNSFEQLCINYTNEKLQQLFNHTMFILEQEE 168
+G++DM G + E++ Q+ +N + + L+ H+ L Q E
Sbjct: 138 QNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIYGQNI-NLYVHSFLGLGQTE 193
>pdb|1S3Z|A Chain A, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And Ribostamycin
pdb|1S3Z|B Chain B, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And Ribostamycin
pdb|1S5K|A Chain A, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And N-Terminal His(6)-Tag (Crystal Form 1)
pdb|1S5K|B Chain B, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And N-Terminal His(6)-Tag (Crystal Form 1)
pdb|1S60|A Chain A, Aminoglycoside N-Acetyltransferase Aac(6')-Iy In Complex
With Coa And N-Terminal His(6)-Tag (Crystal Form 2)
pdb|2VBQ|A Chain A, Structure Of Aac(6')-Iy In Complex With Bisubstrate Analog
Coa-S-Monomethyl-Acetylneamine.
pdb|2VBQ|B Chain B, Structure Of Aac(6')-Iy In Complex With Bisubstrate Analog
Coa-S-Monomethyl-Acetylneamine
Length = 165
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 11 RIVSAVMLFGSMQFKQERNSDQASLPDNTVAQKIAKLLGLSITE 54
++++AV +G+ + +E SD + P+NT++QK+ + LG TE
Sbjct: 115 QLIAAVQRWGTNKGCREMASDTS--PENTISQKVHQALGFEETE 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.135 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,120,002
Number of Sequences: 62578
Number of extensions: 398638
Number of successful extensions: 1196
Number of sequences better than 100.0: 64
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 859
Number of HSP's gapped (non-prelim): 124
length of query: 363
length of database: 14,973,337
effective HSP length: 100
effective length of query: 263
effective length of database: 8,715,537
effective search space: 2292186231
effective search space used: 2292186231
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)