Query psy1785
Match_columns 629
No_of_seqs 377 out of 2932
Neff 7.9
Searched_HMMs 46136
Date Sat Aug 17 00:38:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1785.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1785hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0629|consensus 100.0 6.7E-99 1E-103 764.0 33.9 490 75-629 14-510 (510)
2 PLN02590 probable tyrosine dec 100.0 1.5E-80 3.2E-85 683.7 49.7 464 88-629 54-533 (539)
3 PLN02880 tyrosine decarboxylas 100.0 3.1E-75 6.7E-80 641.8 47.7 460 89-628 11-484 (490)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 1.8E-65 3.8E-70 565.2 46.1 419 189-624 60-521 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 1.4E-66 3.1E-71 555.3 29.1 361 180-553 1-373 (373)
6 KOG0628|consensus 100.0 3E-65 6.4E-70 524.6 36.3 451 89-628 2-471 (511)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 4.6E-61 9.9E-66 533.6 47.9 478 76-627 2-601 (608)
8 PLN02263 serine decarboxylase 100.0 1.1E-50 2.4E-55 436.2 39.0 351 198-626 75-441 (470)
9 COG0076 GadB Glutamate decarbo 100.0 5.5E-50 1.2E-54 434.7 36.3 408 188-624 30-445 (460)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 6.4E-49 1.4E-53 425.5 41.4 397 189-629 15-430 (431)
11 PLN03032 serine decarboxylase; 100.0 4.4E-44 9.5E-49 380.3 36.9 337 217-625 23-373 (374)
12 PRK02769 histidine decarboxyla 100.0 1.9E-42 4.1E-47 370.3 38.5 337 216-626 20-370 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 5.5E-38 1.2E-42 333.7 32.5 339 220-625 1-345 (345)
14 PRK13520 L-tyrosine decarboxyl 100.0 5.4E-30 1.2E-34 275.1 37.6 364 196-627 2-370 (371)
15 TIGR00461 gcvP glycine dehydro 100.0 8.1E-30 1.8E-34 292.3 34.0 382 197-628 467-867 (939)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 8.9E-29 1.9E-33 266.0 37.4 369 197-625 1-373 (373)
17 KOG1383|consensus 100.0 1.3E-28 2.9E-33 255.2 29.4 386 189-628 54-446 (491)
18 PRK05367 glycine dehydrogenase 100.0 3.8E-27 8.3E-32 275.1 36.6 375 196-628 478-875 (954)
19 COG0520 csdA Selenocysteine ly 100.0 1.7E-26 3.7E-31 248.5 37.5 351 219-627 24-404 (405)
20 PRK04366 glycine dehydrogenase 100.0 1.1E-26 2.3E-31 257.3 36.3 397 179-628 34-448 (481)
21 COG1104 NifS Cysteine sulfinat 100.0 1.3E-26 2.8E-31 241.1 32.7 316 242-628 30-377 (386)
22 PRK00451 glycine dehydrogenase 100.0 4.9E-26 1.1E-30 250.8 34.0 379 180-626 32-446 (447)
23 PF02347 GDC-P: Glycine cleava 99.9 5.1E-25 1.1E-29 234.1 20.0 369 180-622 32-429 (429)
24 PRK05367 glycine dehydrogenase 99.9 2.6E-23 5.7E-28 243.1 31.5 390 123-623 17-437 (954)
25 cd06453 SufS_like Cysteine des 99.9 1.6E-22 3.6E-27 217.4 35.1 317 249-622 35-373 (373)
26 TIGR01979 sufS cysteine desulf 99.9 3.7E-22 8E-27 217.0 36.0 320 253-629 58-402 (403)
27 COG0403 GcvP Glycine cleavage 99.9 4.3E-23 9.2E-28 212.9 26.5 357 194-625 55-447 (450)
28 TIGR00461 gcvP glycine dehydro 99.9 1.3E-22 2.8E-27 233.3 31.9 367 180-623 31-426 (939)
29 PLN02414 glycine dehydrogenase 99.9 1.2E-22 2.6E-27 236.5 31.2 360 188-625 75-466 (993)
30 PRK12566 glycine dehydrogenase 99.9 1.7E-22 3.6E-27 230.9 31.6 382 194-628 477-876 (954)
31 TIGR03402 FeS_nifS cysteine de 99.9 8.7E-22 1.9E-26 212.4 35.2 306 252-628 37-372 (379)
32 PRK09295 bifunctional cysteine 99.9 9.8E-22 2.1E-26 214.0 35.5 351 219-627 25-403 (406)
33 TIGR03392 FeS_syn_CsdA cystein 99.9 1.7E-21 3.6E-26 211.6 35.5 320 252-628 55-395 (398)
34 PLN02414 glycine dehydrogenase 99.9 6.6E-22 1.4E-26 230.3 33.9 375 196-628 504-907 (993)
35 PRK10874 cysteine sulfinate de 99.9 2E-21 4.4E-26 211.1 35.8 352 219-628 21-398 (401)
36 PLN02651 cysteine desulfurase 99.9 1.3E-21 2.9E-26 209.8 33.4 296 252-616 38-364 (364)
37 TIGR01977 am_tr_V_EF2568 cyste 99.9 2.2E-21 4.7E-26 208.9 35.0 310 256-624 43-375 (376)
38 PF00266 Aminotran_5: Aminotra 99.9 3E-21 6.5E-26 207.6 31.4 317 248-618 34-371 (371)
39 TIGR02006 IscS cysteine desulf 99.9 1.9E-21 4E-26 211.5 30.1 308 256-627 46-376 (402)
40 TIGR03531 selenium_SpcS O-phos 99.9 2.8E-21 6.2E-26 209.1 31.1 303 189-540 28-354 (444)
41 PLN02855 Bifunctional selenocy 99.9 3.9E-20 8.4E-25 202.6 34.9 353 218-628 33-418 (424)
42 cd00613 GDC-P Glycine cleavage 99.9 3.3E-20 7.2E-25 201.2 29.9 316 252-622 59-398 (398)
43 cd06451 AGAT_like Alanine-glyo 99.9 8.9E-20 1.9E-24 194.9 32.6 318 251-626 26-355 (356)
44 TIGR01814 kynureninase kynuren 99.9 1.7E-19 3.7E-24 196.4 35.2 306 265-626 78-405 (406)
45 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 1.4E-19 2.9E-24 195.9 34.0 310 259-628 65-381 (387)
46 PRK12566 glycine dehydrogenase 99.9 2.4E-20 5.3E-25 213.3 27.1 360 180-623 46-439 (954)
47 TIGR03403 nifS_epsilon cystein 99.9 3.5E-19 7.6E-24 192.4 34.8 304 259-628 44-375 (382)
48 COG0075 Serine-pyruvate aminot 99.9 1.3E-19 2.9E-24 190.2 30.1 320 250-628 31-363 (383)
49 PRK02948 cysteine desulfurase; 99.9 2.8E-19 6.1E-24 193.0 32.7 308 251-628 37-374 (381)
50 TIGR01976 am_tr_V_VC1184 cyste 99.9 5.8E-19 1.3E-23 191.5 34.2 305 254-622 57-397 (397)
51 PRK14012 cysteine desulfurase; 99.9 6.8E-19 1.5E-23 191.6 33.5 302 259-628 51-379 (404)
52 TIGR02326 transamin_PhnW 2-ami 99.9 4.1E-19 8.8E-24 190.5 30.3 318 253-626 31-360 (363)
53 KOG1549|consensus 99.9 2.2E-19 4.9E-24 187.7 26.7 347 215-628 41-418 (428)
54 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 3.2E-18 7E-23 183.4 33.9 306 260-626 47-360 (361)
55 PLN02409 serine--glyoxylate am 99.8 3.5E-18 7.6E-23 185.7 32.1 324 251-628 36-372 (401)
56 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 8E-18 1.7E-22 179.3 32.3 316 254-625 28-354 (355)
57 COG2008 GLY1 Threonine aldolas 99.8 2E-18 4.3E-23 176.5 22.2 305 247-626 29-341 (342)
58 PTZ00094 serine hydroxymethylt 99.8 8.3E-18 1.8E-22 185.4 28.9 308 252-627 75-407 (452)
59 PLN02724 Molybdenum cofactor s 99.8 1.1E-17 2.5E-22 195.9 30.9 366 219-625 36-485 (805)
60 PRK13479 2-aminoethylphosphona 99.8 2.5E-17 5.4E-22 177.0 30.7 321 253-628 33-363 (368)
61 PRK03080 phosphoserine aminotr 99.8 1E-17 2.3E-22 180.5 25.4 313 250-628 41-373 (378)
62 TIGR03235 DNA_S_dndA cysteine 99.8 4.3E-17 9.4E-22 174.1 29.8 254 253-552 38-300 (353)
63 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.2E-16 2.7E-21 171.8 33.4 308 260-628 54-368 (370)
64 COG1103 Archaea-specific pyrid 99.8 4.8E-17 1E-21 158.2 25.9 311 260-628 64-380 (382)
65 COG1003 GcvP Glycine cleavage 99.8 2.8E-16 6E-21 162.5 29.6 373 196-628 45-447 (496)
66 KOG0629|consensus 99.8 1.4E-18 3E-23 178.4 10.1 191 192-422 137-334 (510)
67 PLN02721 threonine aldolase 99.7 3.7E-16 8E-21 166.6 26.9 298 260-629 43-353 (353)
68 PLN02590 probable tyrosine dec 99.7 5.8E-18 1.3E-22 187.6 12.9 253 137-422 104-368 (539)
69 cd00611 PSAT_like Phosphoserin 99.7 2E-16 4.4E-21 169.1 22.4 313 243-626 27-354 (355)
70 cd06502 TA_like Low-specificit 99.7 2.8E-16 6.1E-21 166.5 22.5 294 260-624 35-337 (338)
71 KOG1368|consensus 99.7 2.5E-16 5.5E-21 155.2 19.6 303 247-623 50-363 (384)
72 KOG2862|consensus 99.7 6.2E-15 1.4E-19 146.4 28.6 328 238-626 32-380 (385)
73 cd00609 AAT_like Aspartate ami 99.7 5.6E-15 1.2E-19 156.4 30.4 315 241-623 24-349 (350)
74 PRK07179 hypothetical protein; 99.7 2.8E-14 6E-19 155.5 31.1 289 263-628 105-398 (407)
75 TIGR01822 2am3keto_CoA 2-amino 99.7 3E-14 6.5E-19 154.4 31.1 298 260-628 86-389 (393)
76 cd00616 AHBA_syn 3-amino-5-hyd 99.7 1.9E-14 4.1E-19 153.4 27.8 300 260-623 21-352 (352)
77 cd06454 KBL_like KBL_like; thi 99.7 7E-14 1.5E-18 148.7 32.0 297 259-626 48-349 (349)
78 PRK05355 3-phosphoserine/phosp 99.7 5.3E-15 1.1E-19 158.2 22.2 305 250-627 41-357 (360)
79 TIGR01364 serC_1 phosphoserine 99.7 6.7E-15 1.4E-19 156.7 22.7 305 251-628 31-348 (349)
80 TIGR01366 serC_3 phosphoserine 99.7 2E-14 4.4E-19 153.9 26.1 308 249-629 33-361 (361)
81 PLN02880 tyrosine decarboxylas 99.7 2E-16 4.4E-21 175.1 10.9 251 137-421 56-319 (490)
82 PLN03226 serine hydroxymethylt 99.6 6.4E-14 1.4E-18 154.5 28.6 316 253-627 76-418 (475)
83 PRK13580 serine hydroxymethylt 99.6 3.5E-14 7.6E-19 154.3 26.0 322 250-627 88-444 (493)
84 cd00378 SHMT Serine-glycine hy 99.6 1.1E-13 2.4E-18 150.5 27.5 305 252-627 60-384 (402)
85 PRK13034 serine hydroxymethylt 99.6 2.7E-13 5.8E-18 148.0 30.5 305 252-627 69-391 (416)
86 PRK00011 glyA serine hydroxyme 99.6 2E-13 4.3E-18 149.3 28.2 305 253-627 67-388 (416)
87 PRK05937 8-amino-7-oxononanoat 99.6 5.9E-13 1.3E-17 143.3 31.3 294 255-627 54-349 (370)
88 TIGR01821 5aminolev_synth 5-am 99.6 9.5E-13 2.1E-17 143.3 32.1 298 260-628 93-396 (402)
89 TIGR01437 selA_rel uncharacter 99.6 4.5E-13 9.8E-18 143.7 28.3 302 257-625 45-362 (363)
90 COG0156 BioF 7-keto-8-aminopel 99.6 5E-13 1.1E-17 142.0 27.9 294 252-625 83-387 (388)
91 PLN02483 serine palmitoyltrans 99.6 1.7E-12 3.7E-17 144.3 33.4 345 214-628 104-466 (489)
92 PF00282 Pyridoxal_deC: Pyrido 99.6 1.2E-16 2.6E-21 171.2 0.2 256 125-423 1-276 (373)
93 KOG0628|consensus 99.6 2.5E-15 5.4E-20 156.4 9.2 279 93-421 10-315 (511)
94 PRK06939 2-amino-3-ketobutyrat 99.6 1.7E-12 3.7E-17 140.7 30.3 302 256-628 86-393 (397)
95 PRK09064 5-aminolevulinate syn 99.6 2.8E-12 6E-17 139.8 31.9 297 260-628 94-397 (407)
96 cd00615 Orn_deC_like Ornithine 99.6 2.6E-14 5.7E-19 148.9 15.0 223 259-532 61-294 (294)
97 PRK13392 5-aminolevulinate syn 99.6 2.8E-12 6E-17 140.0 31.2 298 260-628 94-397 (410)
98 TIGR01365 serC_2 phosphoserine 99.6 5.7E-13 1.2E-17 142.3 24.9 320 246-627 28-372 (374)
99 PLN02822 serine palmitoyltrans 99.6 5E-12 1.1E-16 140.3 32.5 310 256-628 153-477 (481)
100 PRK15029 arginine decarboxylas 99.5 2E-12 4.4E-17 147.7 28.7 172 259-457 207-402 (755)
101 PLN02271 serine hydroxymethylt 99.5 3E-12 6.5E-17 139.9 28.7 321 250-626 187-538 (586)
102 PRK05958 8-amino-7-oxononanoat 99.5 3.3E-12 7.2E-17 137.7 29.1 293 259-625 86-384 (385)
103 KOG0630|consensus 99.5 1.3E-13 2.8E-18 143.6 15.8 281 230-540 139-440 (838)
104 PRK08361 aspartate aminotransf 99.5 1.3E-11 2.8E-16 133.9 31.0 307 249-628 66-390 (391)
105 PRK13393 5-aminolevulinate syn 99.5 1.7E-11 3.7E-16 133.7 31.1 297 259-628 92-396 (406)
106 TIGR01141 hisC histidinol-phos 99.5 4.1E-12 9E-17 135.3 25.6 284 260-623 57-346 (346)
107 PLN02955 8-amino-7-oxononanoat 99.5 2.7E-11 5.9E-16 131.8 31.8 307 257-627 147-460 (476)
108 PLN03227 serine palmitoyltrans 99.5 5.2E-11 1.1E-15 129.0 33.8 308 260-628 46-382 (392)
109 PF01276 OKR_DC_1: Orn/Lys/Arg 99.5 3.1E-13 6.8E-18 144.5 14.7 233 260-540 69-327 (417)
110 TIGR01825 gly_Cac_T_rel pyrido 99.5 2.1E-11 4.5E-16 131.8 29.2 299 256-628 77-381 (385)
111 cd00614 CGS_like CGS_like: Cys 99.5 9.2E-12 2E-16 134.0 26.2 231 251-553 38-293 (369)
112 TIGR03588 PseC UDP-4-keto-6-de 99.5 1.3E-11 2.7E-16 133.5 27.2 317 252-625 28-379 (380)
113 PRK06108 aspartate aminotransf 99.5 3.9E-11 8.4E-16 129.5 30.0 310 249-626 57-380 (382)
114 PRK05613 O-acetylhomoserine am 99.5 3.4E-11 7.3E-16 131.7 28.7 240 251-539 67-328 (437)
115 PRK11658 UDP-4-amino-4-deoxy-L 99.5 2.6E-11 5.6E-16 131.0 27.3 316 252-626 32-377 (379)
116 TIGR01328 met_gam_lyase methio 99.5 2.9E-11 6.3E-16 130.9 27.4 220 252-540 58-284 (391)
117 PRK08133 O-succinylhomoserine 99.5 3.3E-11 7.1E-16 130.5 27.7 214 260-540 64-284 (390)
118 PRK13578 ornithine decarboxyla 99.5 1.3E-11 2.8E-16 139.8 25.1 320 260-626 177-563 (720)
119 PRK08861 cystathionine gamma-s 99.4 3.9E-11 8.4E-16 129.4 27.4 218 251-539 51-276 (388)
120 TIGR00858 bioF 8-amino-7-oxono 99.4 4.6E-11 9.9E-16 127.5 27.8 291 260-623 64-360 (360)
121 TIGR03799 NOD_PanD_pyr putativ 99.4 4.1E-13 8.8E-18 149.3 12.2 302 78-422 10-346 (522)
122 PRK05764 aspartate aminotransf 99.4 1.8E-10 3.9E-15 124.9 32.6 314 249-628 64-391 (393)
123 PRK06225 aspartate aminotransf 99.4 1E-10 2.2E-15 126.4 30.4 297 260-628 69-376 (380)
124 KOG2040|consensus 99.4 3.4E-11 7.4E-16 129.4 24.8 340 241-627 565-917 (1001)
125 PF01212 Beta_elim_lyase: Beta 99.4 3.2E-13 7E-18 139.5 9.4 244 247-546 23-281 (290)
126 COG0112 GlyA Glycine/serine hy 99.4 5.6E-11 1.2E-15 122.8 24.8 311 249-627 64-389 (413)
127 PF00464 SHMT: Serine hydroxym 99.4 1.6E-11 3.6E-16 130.8 21.7 303 250-622 59-399 (399)
128 PRK07812 O-acetylhomoserine am 99.4 8.9E-11 1.9E-15 128.3 27.7 240 252-540 68-324 (436)
129 PRK15400 lysine decarboxylase 99.4 3.6E-11 7.8E-16 136.1 24.7 306 260-625 198-556 (714)
130 PLN02452 phosphoserine transam 99.4 3E-11 6.6E-16 129.0 23.0 306 250-627 45-362 (365)
131 PRK08064 cystathionine beta-ly 99.4 9.6E-11 2.1E-15 126.9 27.2 292 251-625 52-383 (390)
132 PRK08114 cystathionine beta-ly 99.4 1.1E-10 2.4E-15 125.6 27.3 218 250-539 59-286 (395)
133 PRK15399 lysine decarboxylase 99.4 8.8E-11 1.9E-15 133.0 27.5 307 260-625 198-556 (713)
134 PRK08248 O-acetylhomoserine am 99.4 1.1E-10 2.4E-15 127.7 27.5 239 251-540 62-320 (431)
135 PRK09028 cystathionine beta-ly 99.4 2.3E-10 5E-15 123.4 29.2 216 252-539 60-283 (394)
136 TIGR01329 cysta_beta_ly_E cyst 99.4 5.7E-11 1.2E-15 128.1 24.4 210 260-537 50-267 (378)
137 PRK05968 hypothetical protein; 99.4 2E-10 4.2E-15 124.4 28.7 229 252-553 62-310 (389)
138 COG3844 Kynureninase [Amino ac 99.4 6.7E-11 1.5E-15 118.8 22.6 309 257-628 76-402 (407)
139 TIGR01325 O_suc_HS_sulf O-succ 99.4 1.7E-10 3.8E-15 124.5 27.7 212 261-539 58-276 (380)
140 cd00610 OAT_like Acetyl ornith 99.4 4.8E-10 1E-14 122.3 31.1 312 256-625 78-412 (413)
141 PRK07504 O-succinylhomoserine 99.4 2E-10 4.4E-15 124.7 27.8 218 252-539 64-288 (398)
142 TIGR02618 tyr_phenol_ly tyrosi 99.4 1.4E-10 3E-15 124.7 25.8 354 218-627 38-425 (450)
143 PRK05957 aspartate aminotransf 99.4 1.2E-09 2.6E-14 118.5 33.3 309 249-626 61-383 (389)
144 PRK06767 methionine gamma-lyas 99.4 2.3E-10 5E-15 123.8 27.5 230 252-553 60-308 (386)
145 TIGR01324 cysta_beta_ly_B cyst 99.4 2.2E-10 4.9E-15 123.2 27.2 217 251-539 48-272 (377)
146 PRK05994 O-acetylhomoserine am 99.4 3.1E-10 6.6E-15 124.3 28.6 237 252-540 62-319 (427)
147 PRK14807 histidinol-phosphate 99.4 5.4E-10 1.2E-14 119.4 29.3 286 260-626 62-350 (351)
148 PRK08134 O-acetylhomoserine am 99.4 7.8E-11 1.7E-15 128.9 23.1 239 251-539 62-319 (433)
149 PLN02509 cystathionine beta-ly 99.4 2.9E-10 6.3E-15 124.9 27.6 212 260-539 136-355 (464)
150 KOG2040|consensus 99.4 3.1E-11 6.8E-16 129.8 19.0 384 124-623 60-478 (1001)
151 PRK08574 cystathionine gamma-s 99.4 3.3E-10 7.2E-15 122.4 27.3 218 251-539 51-275 (385)
152 TIGR03811 tyr_de_CO2_Ent tyros 99.4 1E-11 2.3E-16 139.3 16.0 286 90-421 20-395 (608)
153 cd01494 AAT_I Aspartate aminot 99.4 1.7E-11 3.7E-16 115.5 15.0 163 260-455 3-170 (170)
154 PRK07811 cystathionine gamma-s 99.3 4.9E-10 1.1E-14 121.3 27.8 218 252-540 60-285 (388)
155 TIGR03576 pyridox_MJ0158 pyrid 99.3 8E-10 1.7E-14 117.7 29.0 284 256-625 53-344 (346)
156 COG0399 WecE Predicted pyridox 99.3 1.7E-09 3.7E-14 114.4 30.9 312 252-627 33-372 (374)
157 PRK13238 tnaA tryptophanase/L- 99.3 4.7E-10 1E-14 123.7 27.9 317 248-627 73-432 (460)
158 KOG1359|consensus 99.3 2.4E-10 5.2E-15 113.0 22.3 293 255-628 110-412 (417)
159 PRK10534 L-threonine aldolase; 99.3 2.6E-10 5.6E-15 120.9 24.6 294 249-626 30-331 (333)
160 PRK07050 cystathionine beta-ly 99.3 1.5E-10 3.2E-15 125.5 23.0 219 251-540 63-289 (394)
161 PRK08776 cystathionine gamma-s 99.3 7.1E-10 1.5E-14 120.5 28.3 217 252-539 59-283 (405)
162 PRK06084 O-acetylhomoserine am 99.3 5E-10 1.1E-14 122.4 27.1 238 252-540 57-315 (425)
163 PRK07582 cystathionine gamma-l 99.3 3E-10 6.4E-15 122.1 24.8 227 252-553 50-300 (366)
164 TIGR02080 O_succ_thio_ly O-suc 99.3 9.7E-10 2.1E-14 118.7 27.2 216 261-540 55-275 (382)
165 PRK00950 histidinol-phosphate 99.3 9.8E-10 2.1E-14 117.7 27.2 283 260-626 72-360 (361)
166 PRK09082 methionine aminotrans 99.3 1.3E-09 2.7E-14 118.1 28.3 307 249-624 63-385 (386)
167 PRK08045 cystathionine gamma-s 99.3 9.1E-10 2E-14 119.0 26.9 215 261-539 56-275 (386)
168 PRK01688 histidinol-phosphate 99.3 1.7E-10 3.7E-15 123.3 21.2 283 260-623 60-351 (351)
169 PRK06207 aspartate aminotransf 99.3 9.5E-09 2.1E-13 112.0 34.8 312 249-627 74-401 (405)
170 PRK04311 selenocysteine syntha 99.3 4E-09 8.6E-14 116.0 31.7 296 260-627 130-463 (464)
171 PRK03244 argD acetylornithine 99.3 2.7E-09 5.8E-14 116.1 30.3 290 260-628 88-394 (398)
172 PRK05939 hypothetical protein; 99.3 4.2E-10 9.1E-15 122.0 23.9 238 251-539 45-290 (397)
173 PRK07810 O-succinylhomoserine 99.3 1.6E-09 3.5E-14 117.7 28.4 219 251-540 68-294 (403)
174 PRK07671 cystathionine beta-ly 99.3 1.7E-09 3.7E-14 116.6 28.4 217 252-540 49-273 (377)
175 PRK08363 alanine aminotransfer 99.3 2E-09 4.3E-14 117.1 29.0 313 251-627 68-393 (398)
176 PRK06176 cystathionine gamma-s 99.3 1.6E-09 3.5E-14 116.9 27.9 218 251-540 48-273 (380)
177 PRK05387 histidinol-phosphate 99.3 2.2E-09 4.7E-14 114.7 28.3 285 260-627 63-352 (353)
178 PRK02731 histidinol-phosphate 99.3 1.9E-09 4.1E-14 115.8 27.8 290 260-627 70-365 (367)
179 PF00155 Aminotran_1_2: Aminot 99.3 8E-10 1.7E-14 118.3 24.8 307 249-622 40-363 (363)
180 PRK06234 methionine gamma-lyas 99.3 2E-09 4.2E-14 117.1 27.9 219 251-539 62-290 (400)
181 PRK07324 transaminase; Validat 99.3 5.1E-09 1.1E-13 112.9 30.7 291 262-627 67-369 (373)
182 PRK08249 cystathionine gamma-s 99.3 2.8E-09 6.1E-14 115.6 28.7 219 250-539 61-286 (398)
183 TIGR01265 tyr_nico_aTase tyros 99.3 2.8E-08 6.1E-13 108.3 36.8 306 261-627 77-400 (403)
184 PRK08247 cystathionine gamma-s 99.3 2.2E-09 4.7E-14 115.5 27.2 225 261-553 56-288 (366)
185 PRK07269 cystathionine gamma-s 99.3 8.2E-10 1.8E-14 118.4 23.6 231 251-553 52-288 (364)
186 cd00617 Tnase_like Tryptophana 99.3 3.9E-09 8.4E-14 115.1 29.1 318 249-627 49-407 (431)
187 PRK07682 hypothetical protein; 99.3 5.7E-09 1.2E-13 112.7 30.3 308 249-628 53-376 (378)
188 PRK08056 threonine-phosphate d 99.3 3.8E-09 8.2E-14 113.2 28.4 287 260-627 58-354 (356)
189 PRK08912 hypothetical protein; 99.3 1.5E-08 3.2E-13 109.8 33.0 310 249-626 59-384 (387)
190 PRK06702 O-acetylhomoserine am 99.2 3.9E-09 8.4E-14 115.0 28.2 237 252-540 60-317 (432)
191 TIGR03537 DapC succinyldiamino 99.2 1.6E-08 3.4E-13 108.1 32.2 305 249-624 32-349 (350)
192 PLN00175 aminotransferase fami 99.2 1.7E-08 3.7E-13 110.3 33.1 309 248-627 86-412 (413)
193 PLN02656 tyrosine transaminase 99.2 2.3E-08 4.9E-13 109.2 34.0 327 235-627 54-402 (409)
194 PLN03026 histidinol-phosphate 99.2 5.4E-09 1.2E-13 113.0 28.8 287 260-625 89-379 (380)
195 PRK07309 aromatic amino acid a 99.2 2.6E-08 5.6E-13 108.1 34.1 308 254-628 68-388 (391)
196 PF01041 DegT_DnrJ_EryC1: DegT 99.2 3.9E-09 8.5E-14 113.4 27.3 308 252-623 24-363 (363)
197 PRK06290 aspartate aminotransf 99.2 1.9E-08 4E-13 109.9 32.8 310 253-628 81-405 (410)
198 PRK06434 cystathionine gamma-l 99.2 3.1E-09 6.7E-14 114.4 26.1 230 249-553 60-308 (384)
199 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.2 4.2E-09 9.2E-14 113.6 26.9 302 260-626 34-374 (375)
200 TIGR01326 OAH_OAS_sulfhy OAH/O 99.2 5.3E-09 1.1E-13 114.4 27.8 233 260-540 60-312 (418)
201 PRK12414 putative aminotransfe 99.2 1.5E-08 3.3E-13 109.7 31.1 307 249-624 62-383 (384)
202 PRK03158 histidinol-phosphate 99.2 4.5E-09 9.7E-14 112.6 26.8 286 260-625 67-358 (359)
203 TIGR01140 L_thr_O3P_dcar L-thr 99.2 2.9E-09 6.3E-14 112.8 25.0 273 260-623 50-330 (330)
204 PRK04635 histidinol-phosphate 99.2 1.5E-09 3.2E-14 116.2 23.0 281 260-624 63-351 (354)
205 PRK04870 histidinol-phosphate 99.2 3.7E-09 8E-14 113.1 25.9 285 260-625 66-355 (356)
206 PRK13237 tyrosine phenol-lyase 99.2 2.7E-09 5.9E-14 115.2 24.7 320 248-627 73-432 (460)
207 TIGR00474 selA seryl-tRNA(sec) 99.2 9.5E-09 2.1E-13 112.7 29.4 167 260-457 125-303 (454)
208 PRK08960 hypothetical protein; 99.2 2E-08 4.3E-13 108.9 31.5 307 249-625 65-384 (387)
209 PRK07550 hypothetical protein; 99.2 3.3E-08 7.2E-13 107.0 33.1 308 248-626 62-385 (386)
210 PLN02242 methionine gamma-lyas 99.2 6.5E-09 1.4E-13 113.4 27.5 220 252-540 75-303 (418)
211 PRK07777 aminotransferase; Val 99.2 3.2E-08 7E-13 107.1 32.7 309 249-626 57-384 (387)
212 PRK07681 aspartate aminotransf 99.2 4.3E-08 9.4E-13 106.7 33.7 303 253-626 69-386 (399)
213 PRK06358 threonine-phosphate d 99.2 1E-08 2.2E-13 109.7 28.3 287 260-626 57-353 (354)
214 PRK12462 phosphoserine aminotr 99.2 3.8E-09 8.3E-14 112.0 24.5 307 249-627 41-361 (364)
215 COG0436 Aspartate/tyrosine/aro 99.2 1.7E-08 3.7E-13 109.2 30.1 314 249-627 61-390 (393)
216 PRK07505 hypothetical protein; 99.2 2.8E-08 6.1E-13 108.2 32.0 301 256-627 90-398 (402)
217 PRK07908 hypothetical protein; 99.2 5.7E-09 1.2E-13 111.4 26.0 281 260-627 61-346 (349)
218 TIGR02379 ECA_wecE TDP-4-keto- 99.2 1E-08 2.2E-13 110.5 27.9 312 252-626 30-375 (376)
219 PRK00854 rocD ornithine--oxo-a 99.2 1.5E-08 3.2E-13 110.4 29.3 297 260-626 86-399 (401)
220 PRK05967 cystathionine beta-ly 99.2 9.8E-09 2.1E-13 110.7 26.9 217 251-539 62-286 (395)
221 PRK04073 rocD ornithine--oxo-a 99.2 1.8E-08 3.9E-13 109.5 29.3 293 260-625 85-394 (396)
222 TIGR01885 Orn_aminotrans ornit 99.2 3.9E-08 8.4E-13 107.1 31.5 301 260-626 82-400 (401)
223 PRK05166 histidinol-phosphate 99.2 1.2E-08 2.7E-13 109.8 26.9 288 261-626 75-369 (371)
224 PRK07568 aspartate aminotransf 99.2 2.9E-08 6.2E-13 107.9 30.0 287 271-627 85-391 (397)
225 PRK15407 lipopolysaccharide bi 99.2 8.9E-09 1.9E-13 113.1 25.7 321 261-627 67-435 (438)
226 PRK06460 hypothetical protein; 99.2 1.2E-08 2.6E-13 110.0 26.4 218 250-539 42-267 (376)
227 PRK07503 methionine gamma-lyas 99.2 2.9E-09 6.2E-14 115.9 21.7 218 252-539 64-289 (403)
228 PRK09265 aminotransferase AlaT 99.2 2.7E-08 5.8E-13 108.5 29.2 294 271-627 92-400 (404)
229 TIGR03540 DapC_direct LL-diami 99.2 7.7E-08 1.7E-12 104.0 32.4 300 254-623 68-381 (383)
230 PLN00145 tyrosine/nicotianamin 99.2 5E-08 1.1E-12 107.2 31.2 315 253-627 94-423 (430)
231 PLN02376 1-aminocyclopropane-1 99.2 5.1E-08 1.1E-12 108.8 31.6 316 256-626 97-436 (496)
232 PTZ00125 ornithine aminotransf 99.1 5.2E-08 1.1E-12 106.0 30.9 301 259-628 75-395 (400)
233 PRK09105 putative aminotransfe 99.1 2E-08 4.3E-13 108.2 27.2 281 260-626 81-368 (370)
234 KOG1357|consensus 99.1 3.6E-09 7.7E-14 110.6 20.3 343 215-627 141-501 (519)
235 PTZ00433 tyrosine aminotransfe 99.1 1.7E-07 3.8E-12 102.4 34.2 328 232-627 53-407 (412)
236 COG2873 MET17 O-acetylhomoseri 99.1 3E-08 6.5E-13 101.9 25.8 316 247-627 56-424 (426)
237 PRK07337 aminotransferase; Val 99.1 7.4E-08 1.6E-12 104.4 31.0 317 237-624 51-385 (388)
238 PRK06107 aspartate aminotransf 99.1 7E-08 1.5E-12 105.1 30.9 321 249-628 66-400 (402)
239 PRK05942 aspartate aminotransf 99.1 1.3E-07 2.8E-12 102.8 32.6 305 249-626 69-387 (394)
240 PLN02187 rooty/superroot1 99.1 1.4E-07 3.1E-12 104.4 33.0 312 252-627 107-437 (462)
241 PRK06836 aspartate aminotransf 99.1 1E-07 2.2E-12 103.6 31.3 297 257-627 77-390 (394)
242 PRK04781 histidinol-phosphate 99.1 6E-08 1.3E-12 104.2 29.2 288 260-626 62-361 (364)
243 TIGR01264 tyr_amTase_E tyrosin 99.1 7.7E-08 1.7E-12 104.8 30.1 295 272-628 93-399 (401)
244 PF05889 SLA_LP_auto_ag: Solub 99.1 1E-08 2.3E-13 107.5 21.2 309 257-626 56-388 (389)
245 PRK07683 aminotransferase A; V 99.1 1.7E-07 3.7E-12 101.6 31.7 321 236-626 48-381 (387)
246 PRK13355 bifunctional HTH-doma 99.1 1.2E-07 2.6E-12 106.6 31.4 316 249-627 181-513 (517)
247 PTZ00377 alanine aminotransfer 99.1 2.1E-07 4.6E-12 103.8 32.8 333 249-627 111-474 (481)
248 KOG1360|consensus 99.1 3.8E-08 8.1E-13 101.4 23.6 256 310-625 255-521 (570)
249 PRK08068 transaminase; Reviewe 99.1 3.9E-07 8.4E-12 98.8 32.9 304 249-624 66-385 (389)
250 PF01053 Cys_Met_Meta_PP: Cys/ 99.1 2.5E-08 5.4E-13 107.2 23.0 219 250-539 52-280 (386)
251 COG0001 HemL Glutamate-1-semia 99.1 3.4E-07 7.4E-12 97.3 30.9 312 256-628 92-428 (432)
252 TIGR03246 arg_catab_astC succi 99.1 1.5E-07 3.3E-12 102.3 29.5 299 260-628 80-395 (397)
253 PRK08636 aspartate aminotransf 99.1 4.7E-07 1E-11 98.7 33.4 317 249-627 67-399 (403)
254 COG1982 LdcC Arginine/lysine/o 99.1 3E-08 6.6E-13 108.5 23.6 299 260-624 73-404 (557)
255 PRK09276 LL-diaminopimelate am 99.0 3.1E-07 6.7E-12 99.4 31.2 299 256-624 72-384 (385)
256 PRK03321 putative aminotransfe 99.0 4.8E-08 1E-12 104.4 24.4 285 260-627 60-350 (352)
257 TIGR00707 argD acetylornithine 99.0 1.7E-07 3.7E-12 101.0 28.9 296 259-625 71-378 (379)
258 PLN00143 tyrosine/nicotianamin 99.0 1.3E-06 2.8E-11 95.5 35.6 316 249-626 70-402 (409)
259 PRK03715 argD acetylornithine 99.0 1.8E-07 3.9E-12 101.5 28.4 300 257-628 78-393 (395)
260 PRK02936 argD acetylornithine 99.0 2.8E-07 6.1E-12 99.4 29.8 290 256-625 70-376 (377)
261 PLN02624 ornithine-delta-amino 99.0 4.6E-07 9.9E-12 100.7 32.0 303 260-627 120-443 (474)
262 PRK06348 aspartate aminotransf 99.0 6.5E-07 1.4E-11 96.9 32.6 307 249-625 62-382 (384)
263 PRK05964 adenosylmethionine--8 99.0 5.5E-07 1.2E-11 98.8 32.1 317 259-629 87-423 (423)
264 PRK03317 histidinol-phosphate 99.0 1.7E-07 3.6E-12 100.9 27.3 290 256-627 68-363 (368)
265 PRK15481 transcriptional regul 99.0 2.7E-07 5.9E-12 101.4 29.2 275 275-626 142-429 (431)
266 PRK02627 acetylornithine amino 99.0 2.9E-07 6.3E-12 99.9 28.4 299 258-628 82-394 (396)
267 COG0160 GabT 4-aminobutyrate a 99.0 7.4E-07 1.6E-11 96.4 30.4 311 261-628 103-445 (447)
268 PRK06425 histidinol-phosphate 99.0 6.8E-07 1.5E-11 94.8 29.6 281 260-626 43-331 (332)
269 PRK11522 putrescine--2-oxoglut 99.0 8.4E-07 1.8E-11 98.0 31.3 305 260-627 127-450 (459)
270 PRK09148 aminotransferase; Val 99.0 9.6E-07 2.1E-11 96.3 31.4 312 249-626 64-388 (405)
271 PRK01533 histidinol-phosphate 99.0 1.4E-07 3.1E-12 101.4 24.3 280 260-627 67-354 (366)
272 PRK08175 aminotransferase; Val 99.0 2.5E-06 5.3E-11 92.8 33.7 315 248-627 62-388 (395)
273 PRK01278 argD acetylornithine 98.9 6.3E-07 1.4E-11 97.2 28.9 297 260-629 76-389 (389)
274 PLN02450 1-aminocyclopropane-1 98.9 1.3E-06 2.8E-11 97.1 31.9 314 258-627 91-429 (468)
275 PRK08153 histidinol-phosphate 98.9 5.8E-07 1.3E-11 96.8 28.4 289 260-627 70-364 (369)
276 PRK07049 methionine gamma-lyas 98.9 6.5E-07 1.4E-11 98.1 28.7 223 252-540 82-318 (427)
277 PLN02607 1-aminocyclopropane-1 98.9 1.8E-06 3.9E-11 95.2 31.5 311 258-626 100-435 (447)
278 TIGR03372 putres_am_tran putre 98.9 3.1E-06 6.8E-11 92.9 33.0 303 260-625 120-441 (442)
279 PLN02231 alanine transaminase 98.9 4.1E-06 8.9E-11 94.3 34.1 333 247-627 162-526 (534)
280 PRK12381 bifunctional succinyl 98.9 4.2E-07 9.2E-12 99.2 25.5 298 260-628 84-399 (406)
281 KOG2467|consensus 98.9 8.1E-07 1.8E-11 90.9 25.1 331 249-625 78-423 (477)
282 TIGR02617 tnaA_trp_ase tryptop 98.9 1.2E-07 2.6E-12 101.5 20.2 334 247-627 68-440 (467)
283 PRK05093 argD bifunctional N-s 98.9 1.7E-06 3.7E-11 94.3 29.0 299 260-628 85-400 (403)
284 PRK05769 4-aminobutyrate amino 98.9 3.6E-06 7.7E-11 92.8 31.6 310 258-628 98-439 (441)
285 PRK08117 4-aminobutyrate amino 98.9 3.3E-06 7.1E-11 93.0 30.7 313 258-628 87-429 (433)
286 PRK07366 succinyldiaminopimela 98.9 4.2E-06 9.1E-11 90.7 31.0 311 249-625 64-387 (388)
287 COG0626 MetC Cystathionine bet 98.8 2E-06 4.4E-11 91.8 27.0 233 251-553 61-318 (396)
288 PRK02610 histidinol-phosphate 98.8 3.9E-06 8.4E-11 90.6 29.6 277 272-629 89-372 (374)
289 COG0076 GadB Glutamate decarbo 98.8 3.9E-08 8.5E-13 107.9 14.1 259 119-422 16-289 (460)
290 PRK06541 hypothetical protein; 98.8 6E-06 1.3E-10 91.4 31.5 327 260-628 98-455 (460)
291 PLN02760 4-aminobutyrate:pyruv 98.8 5.8E-06 1.3E-10 92.4 31.5 325 259-627 135-490 (504)
292 PRK04260 acetylornithine amino 98.8 2.5E-06 5.5E-11 92.0 27.8 273 276-625 86-374 (375)
293 COG4992 ArgD Ornithine/acetylo 98.8 2.1E-06 4.5E-11 90.5 25.5 292 260-627 87-397 (404)
294 COG1168 MalY Bifunctional PLP- 98.8 8.2E-06 1.8E-10 84.8 29.0 302 260-626 67-384 (388)
295 PRK03967 histidinol-phosphate 98.8 3E-06 6.6E-11 90.0 26.8 272 260-627 58-333 (337)
296 PRK06062 hypothetical protein; 98.8 1.5E-05 3.2E-10 88.1 32.9 316 260-628 98-445 (451)
297 PRK08360 4-aminobutyrate amino 98.8 1.2E-05 2.7E-10 88.5 32.2 310 260-627 87-425 (443)
298 PRK12403 putative aminotransfe 98.8 2.2E-05 4.7E-10 87.0 34.2 322 258-627 99-451 (460)
299 PRK09147 succinyldiaminopimela 98.8 1.1E-05 2.4E-10 87.7 31.6 307 253-626 65-394 (396)
300 PRK07392 threonine-phosphate d 98.8 7.9E-06 1.7E-10 87.7 29.4 290 261-627 61-358 (360)
301 PRK09264 diaminobutyrate--2-ox 98.8 1.1E-05 2.3E-10 88.7 30.7 302 260-627 85-415 (425)
302 PRK06058 4-aminobutyrate amino 98.7 3.1E-05 6.7E-10 85.5 34.0 315 259-629 101-443 (443)
303 PRK07865 N-succinyldiaminopime 98.7 4E-06 8.6E-11 90.1 26.1 295 249-623 58-363 (364)
304 PRK06149 hypothetical protein; 98.7 1.2E-05 2.6E-10 96.9 32.6 317 259-628 626-970 (972)
305 TIGR03538 DapC_gpp succinyldia 98.7 2.2E-05 4.8E-10 85.3 31.8 303 255-625 66-392 (393)
306 PRK14809 histidinol-phosphate 98.7 6.5E-06 1.4E-10 88.2 27.3 282 260-628 68-357 (357)
307 TIGR03539 DapC_actino succinyl 98.7 6.9E-06 1.5E-10 88.0 27.4 290 253-622 56-356 (357)
308 PRK04612 argD acetylornithine 98.7 2.5E-05 5.4E-10 85.2 31.9 301 260-627 85-402 (408)
309 PRK06855 aminotransferase; Val 98.7 3E-05 6.4E-10 85.4 32.8 329 249-627 69-428 (433)
310 PRK07678 aminotransferase; Val 98.7 3.6E-05 7.8E-10 85.1 33.0 328 259-629 91-450 (451)
311 PRK06105 aminotransferase; Pro 98.7 2.1E-05 4.6E-10 87.1 31.1 326 259-628 94-449 (460)
312 TIGR02407 ectoine_ectB diamino 98.7 3.4E-05 7.5E-10 84.3 32.1 303 259-627 80-411 (412)
313 TIGR00700 GABAtrnsam 4-aminobu 98.7 4.3E-05 9.4E-10 83.8 33.0 309 260-627 79-419 (420)
314 PRK05639 4-aminobutyrate amino 98.7 2E-05 4.3E-10 87.2 30.3 310 260-627 99-442 (457)
315 PRK08593 4-aminobutyrate amino 98.7 5.5E-05 1.2E-09 83.5 33.3 312 259-628 87-429 (445)
316 PRK13360 omega amino acid--pyr 98.7 2E-05 4.3E-10 86.9 29.7 318 260-628 92-440 (442)
317 PRK05965 hypothetical protein; 98.7 5.6E-05 1.2E-09 83.7 33.4 325 260-628 93-447 (459)
318 PRK12389 glutamate-1-semialdeh 98.7 3.7E-05 8E-10 84.5 31.1 306 259-629 95-428 (428)
319 COG0079 HisC Histidinol-phosph 98.7 2.6E-05 5.7E-10 83.2 28.8 285 260-627 60-353 (356)
320 PRK00615 glutamate-1-semialdeh 98.6 1.1E-05 2.4E-10 88.5 26.5 310 258-628 94-428 (433)
321 PLN00144 acetylornithine trans 98.6 1.7E-05 3.7E-10 85.8 27.4 296 260-628 60-380 (382)
322 PRK00062 glutamate-1-semialdeh 98.6 1.2E-05 2.6E-10 88.4 26.5 308 259-628 92-424 (426)
323 PRK07036 hypothetical protein; 98.6 7.8E-05 1.7E-09 82.7 33.1 322 258-627 96-451 (466)
324 PLN02482 glutamate-1-semialdeh 98.6 3.3E-05 7.3E-10 85.6 30.0 311 257-629 139-474 (474)
325 PRK09221 beta alanine--pyruvat 98.6 2.9E-05 6.3E-10 85.7 29.3 318 260-628 95-443 (445)
326 COG1167 ARO8 Transcriptional r 98.6 4.4E-05 9.5E-10 84.6 30.7 310 248-627 127-454 (459)
327 PLN02672 methionine S-methyltr 98.6 5.5E-05 1.2E-09 90.1 32.2 315 259-626 736-1078(1082)
328 PRK07495 4-aminobutyrate amino 98.6 0.00017 3.8E-09 79.1 34.2 310 260-628 86-421 (425)
329 PLN02368 alanine transaminase 98.6 3.4E-05 7.5E-10 84.1 28.2 261 248-550 102-392 (407)
330 KOG0259|consensus 98.6 5.1E-05 1.1E-09 78.6 27.3 345 216-626 69-431 (447)
331 PRK06173 adenosylmethionine--8 98.6 4.3E-05 9.3E-10 83.9 29.0 309 259-628 89-425 (429)
332 TIGR00713 hemL glutamate-1-sem 98.6 3E-05 6.5E-10 85.1 27.8 309 260-629 91-423 (423)
333 TIGR00709 dat 2,4-diaminobutyr 98.6 0.00015 3.2E-09 80.1 33.2 318 259-627 84-434 (442)
334 PRK06777 4-aminobutyrate amino 98.6 7.9E-05 1.7E-09 81.7 30.6 308 260-626 86-419 (421)
335 TIGR00508 bioA adenosylmethion 98.6 3.2E-05 7E-10 84.9 27.4 309 260-628 91-426 (427)
336 PTZ00376 aspartate aminotransf 98.6 4.3E-05 9.4E-10 83.3 28.1 283 275-627 96-402 (404)
337 PRK07480 putative aminotransfe 98.5 0.0002 4.4E-09 79.2 33.0 322 259-627 96-447 (456)
338 PRK14808 histidinol-phosphate 98.5 4.6E-05 1E-09 81.0 27.0 268 262-625 61-334 (335)
339 PRK06148 hypothetical protein; 98.5 6.8E-05 1.5E-09 90.6 31.4 317 259-628 665-1010(1013)
340 PRK07483 hypothetical protein; 98.5 0.00022 4.7E-09 78.7 32.8 327 260-627 76-436 (443)
341 PRK07481 hypothetical protein; 98.5 0.0004 8.7E-09 76.8 34.8 328 259-628 88-445 (449)
342 PLN02263 serine decarboxylase 98.5 3.1E-07 6.6E-12 100.3 10.0 226 143-423 75-315 (470)
343 PRK08354 putative aminotransfe 98.5 6.5E-05 1.4E-09 78.9 27.3 146 262-454 45-196 (311)
344 PRK09792 4-aminobutyrate trans 98.5 0.0003 6.6E-09 77.1 33.5 311 260-628 86-421 (421)
345 PRK07482 hypothetical protein; 98.5 0.00027 5.9E-09 78.3 33.0 327 257-627 94-453 (461)
346 PRK08088 4-aminobutyrate amino 98.5 0.00014 3E-09 79.9 30.3 310 260-628 87-423 (425)
347 KOG0256|consensus 98.5 6.1E-05 1.3E-09 78.7 25.2 314 260-625 128-458 (471)
348 PRK06917 hypothetical protein; 98.5 0.00036 7.7E-09 77.1 33.0 329 258-628 75-437 (447)
349 PRK06943 adenosylmethionine--8 98.5 0.00026 5.7E-09 78.3 31.7 316 259-628 99-446 (453)
350 PRK05839 hypothetical protein; 98.5 0.00015 3.3E-09 78.2 29.4 178 256-461 63-252 (374)
351 PRK07030 adenosylmethionine--8 98.5 0.00043 9.3E-09 76.8 33.2 322 258-628 91-446 (466)
352 PRK05664 threonine-phosphate d 98.5 0.00012 2.6E-09 77.5 27.8 270 260-628 52-328 (330)
353 PRK06082 4-aminobutyrate amino 98.5 0.00028 6E-09 78.2 31.2 309 258-627 114-450 (459)
354 PRK06938 diaminobutyrate--2-ox 98.5 0.00011 2.4E-09 81.5 27.9 301 277-628 129-460 (464)
355 PRK07590 L,L-diaminopimelate a 98.4 0.00043 9.4E-09 75.6 32.2 309 248-625 71-408 (409)
356 PRK08637 hypothetical protein; 98.4 0.00024 5.2E-09 77.0 29.8 290 276-629 71-387 (388)
357 PRK07046 aminotransferase; Val 98.4 0.00022 4.8E-09 78.9 29.6 306 256-628 114-450 (453)
358 PRK04013 argD acetylornithine/ 98.4 0.00014 3E-09 78.1 27.2 276 261-628 70-360 (364)
359 PRK07986 adenosylmethionine--8 98.4 0.00031 6.7E-09 77.1 30.1 309 259-627 88-422 (428)
360 PRK09257 aromatic amino acid a 98.4 0.00017 3.7E-09 78.4 28.0 155 278-454 98-260 (396)
361 KOG3846|consensus 98.4 3.9E-05 8.4E-10 77.1 19.8 282 319-628 166-461 (465)
362 COG1932 SerC Phosphoserine ami 98.4 7.2E-05 1.6E-09 77.6 22.4 305 250-627 43-362 (365)
363 PRK06918 4-aminobutyrate amino 98.4 0.00061 1.3E-08 75.5 31.7 313 258-628 98-443 (451)
364 PRK06959 putative threonine-ph 98.4 0.00017 3.7E-09 76.8 26.3 268 260-627 56-332 (339)
365 PRK06916 adenosylmethionine--8 98.4 0.00074 1.6E-08 74.9 32.2 325 259-628 101-455 (460)
366 PRK06931 diaminobutyrate--2-ox 98.4 0.00084 1.8E-08 74.4 32.5 320 257-627 101-453 (459)
367 PRK08742 adenosylmethionine--8 98.4 0.00073 1.6E-08 75.1 31.7 320 259-628 109-467 (472)
368 PRK05630 adenosylmethionine--8 98.3 0.00082 1.8E-08 73.7 30.2 312 260-627 86-419 (422)
369 PRK09440 avtA valine--pyruvate 98.3 0.00085 1.9E-08 73.4 30.4 306 255-627 76-410 (416)
370 PRK08297 L-lysine aminotransfe 98.3 0.00047 1E-08 76.1 28.3 312 261-629 96-442 (443)
371 PRK06209 glutamate-1-semialdeh 98.3 0.00011 2.3E-09 80.9 23.1 298 259-628 90-405 (431)
372 COG0161 BioA Adenosylmethionin 98.3 0.00028 6E-09 76.3 24.9 321 260-627 90-442 (449)
373 TIGR03251 LAT_fam L-lysine 6-t 98.3 0.00048 1E-08 75.8 27.5 303 262-624 90-430 (431)
374 KOG0634|consensus 98.3 0.0011 2.5E-08 70.0 28.4 326 249-622 96-460 (472)
375 TIGR00699 GABAtrns_euk 4-amino 98.3 0.0009 2E-08 74.0 28.9 307 257-625 105-463 (464)
376 KOG1358|consensus 98.2 0.00028 6E-09 73.5 22.1 304 265-628 147-465 (467)
377 TIGR03542 DAPAT_plant LL-diami 98.2 0.004 8.6E-08 67.9 32.3 289 271-625 92-401 (402)
378 TIGR03801 asp_4_decarbox aspar 98.2 0.0016 3.4E-08 72.9 29.1 176 256-457 132-327 (521)
379 KOG0053|consensus 98.2 0.0001 2.2E-09 78.2 18.4 217 252-539 76-300 (409)
380 PLN02397 aspartate transaminas 98.1 0.0055 1.2E-07 67.3 32.3 256 311-627 141-420 (423)
381 COG3033 TnaA Tryptophanase [Am 98.1 7.5E-05 1.6E-09 76.8 15.6 241 347-627 166-443 (471)
382 TIGR01788 Glu-decarb-GAD gluta 98.1 1.4E-05 3.1E-10 87.4 11.2 243 133-422 14-274 (431)
383 KOG1404|consensus 98.0 0.00068 1.5E-08 70.7 20.8 287 275-622 110-432 (442)
384 KOG0257|consensus 98.0 0.0017 3.7E-08 68.5 23.7 242 252-540 68-332 (420)
385 PRK09275 aspartate aminotransf 98.0 0.0062 1.4E-07 68.3 29.9 156 276-457 163-328 (527)
386 KOG1402|consensus 97.8 0.012 2.5E-07 60.4 23.8 294 263-626 107-425 (427)
387 COG1921 SelA Selenocysteine sy 97.5 0.0039 8.6E-08 66.1 16.9 165 266-462 74-242 (395)
388 PLN02974 adenosylmethionine-8- 97.5 0.21 4.6E-06 59.0 32.0 197 387-625 608-815 (817)
389 COG3977 Alanine-alpha-ketoisov 97.5 0.063 1.4E-06 54.5 23.5 184 247-461 68-268 (417)
390 KOG2790|consensus 97.5 0.0096 2.1E-07 59.8 17.6 312 251-627 46-367 (370)
391 PF00202 Aminotran_3: Aminotra 97.4 0.017 3.7E-07 61.5 20.9 235 259-532 61-315 (339)
392 KOG3843|consensus 97.0 0.0071 1.5E-07 60.0 11.5 231 253-532 53-295 (432)
393 PRK02769 histidine decarboxyla 96.9 0.005 1.1E-07 66.6 10.7 214 161-423 20-245 (380)
394 KOG1401|consensus 96.8 0.85 1.8E-05 48.6 25.1 162 275-457 117-291 (433)
395 PLN03032 serine decarboxylase; 96.6 0.054 1.2E-06 58.3 15.7 179 196-424 66-249 (374)
396 KOG0258|consensus 96.6 0.15 3.3E-06 53.6 18.0 144 245-403 105-253 (475)
397 PF03841 SelA: L-seryl-tRNA se 96.4 0.0026 5.7E-08 66.9 4.0 174 263-462 53-232 (367)
398 COG1448 TyrB Aspartate/tyrosin 96.3 0.47 1E-05 50.1 19.6 281 276-625 96-395 (396)
399 KOG1403|consensus 95.9 1.1 2.5E-05 45.6 19.0 307 260-626 86-435 (452)
400 KOG0633|consensus 95.6 0.72 1.6E-05 46.2 16.0 68 329-403 128-196 (375)
401 PF06838 Met_gamma_lyase: Meth 94.9 0.69 1.5E-05 48.8 14.3 217 266-540 63-302 (403)
402 PF12897 Aminotran_MocR: Alani 93.3 3.6 7.9E-05 43.8 16.0 306 260-625 72-412 (425)
403 KOG1405|consensus 91.4 13 0.00028 39.2 16.8 217 352-629 255-484 (484)
404 cd06450 DOPA_deC_like DOPA dec 87.7 4.5 9.8E-05 42.6 11.1 68 346-420 160-227 (345)
405 KOG1412|consensus 87.5 24 0.00051 36.7 15.0 290 276-628 101-405 (410)
406 COG4100 Cystathionine beta-lya 78.3 8.4 0.00018 39.7 7.6 108 338-462 141-255 (416)
407 PRK00451 glycine dehydrogenase 56.8 2.4E+02 0.0052 30.9 14.5 45 123-168 30-75 (447)
408 KOG1383|consensus 54.9 3.3E+02 0.0072 30.1 16.5 27 132-158 52-78 (491)
409 cd00950 DHDPS Dihydrodipicolin 54.8 18 0.0004 37.2 4.9 59 339-397 7-65 (284)
410 COG0329 DapA Dihydrodipicolina 53.2 19 0.00042 37.5 4.8 66 341-406 13-81 (299)
411 PRK03170 dihydrodipicolinate s 53.2 20 0.00044 37.1 4.9 59 338-396 7-65 (292)
412 TIGR02313 HpaI-NOT-DapA 2,4-di 52.8 23 0.00049 36.9 5.2 57 339-395 7-63 (294)
413 TIGR03531 selenium_SpcS O-phos 52.7 3.1E+02 0.0067 30.4 14.2 62 352-421 221-285 (444)
414 PTZ00386 formyl tetrahydrofola 52.1 1.1E+02 0.0023 34.9 10.3 180 197-403 274-473 (625)
415 TIGR03249 KdgD 5-dehydro-4-deo 51.1 23 0.00049 36.9 4.9 59 339-397 12-70 (296)
416 TIGR00674 dapA dihydrodipicoli 50.8 26 0.00057 36.2 5.3 59 339-397 5-63 (285)
417 cd00951 KDGDH 5-dehydro-4-deox 50.6 25 0.00054 36.4 5.1 64 340-403 8-74 (289)
418 cd00408 DHDPS-like Dihydrodipi 50.0 23 0.0005 36.4 4.7 64 340-403 5-71 (281)
419 PRK03620 5-dehydro-4-deoxygluc 47.7 26 0.00056 36.6 4.7 64 340-403 15-81 (303)
420 PF06506 PrpR_N: Propionate ca 47.4 98 0.0021 29.4 8.3 71 311-403 78-148 (176)
421 PRK04147 N-acetylneuraminate l 46.8 29 0.00064 36.0 4.9 58 339-396 10-68 (293)
422 TIGR03679 arCOG00187 arCOG0018 45.3 2.4E+02 0.0052 27.8 11.0 74 324-406 47-121 (218)
423 PLN02417 dihydrodipicolinate s 45.2 33 0.00072 35.3 5.0 57 340-396 9-65 (280)
424 PF01972 SDH_sah: Serine dehyd 45.0 1.9E+02 0.0041 29.7 10.0 80 348-448 70-155 (285)
425 TIGR00683 nanA N-acetylneurami 44.9 32 0.0007 35.6 4.9 58 339-396 7-65 (290)
426 cd00477 FTHFS Formyltetrahydro 44.8 81 0.0018 35.2 8.0 181 197-403 195-390 (524)
427 cd00954 NAL N-Acetylneuraminic 41.8 40 0.00087 34.9 5.0 58 339-396 7-65 (288)
428 PLN02607 1-aminocyclopropane-1 41.7 4.6E+02 0.01 28.9 13.6 68 343-412 209-282 (447)
429 PRK13505 formate--tetrahydrofo 41.5 1.1E+02 0.0023 34.8 8.3 180 197-403 212-406 (557)
430 KOG1411|consensus 39.0 88 0.0019 33.2 6.7 86 511-627 337-424 (427)
431 cd01455 vWA_F11C1-5a_type Von 38.3 1E+02 0.0022 29.9 6.7 55 353-407 95-152 (191)
432 PF03162 Y_phosphatase2: Tyros 37.7 1.1E+02 0.0024 28.8 6.8 82 312-402 35-120 (164)
433 PF00701 DHDPS: Dihydrodipicol 35.8 38 0.00083 34.9 3.7 64 340-403 9-75 (289)
434 PF00289 CPSase_L_chain: Carba 34.1 3.2E+02 0.0069 23.8 8.7 74 311-401 27-102 (110)
435 PRK10638 glutaredoxin 3; Provi 33.7 2.5E+02 0.0055 22.6 7.7 69 312-391 3-73 (83)
436 cd00953 KDG_aldolase KDG (2-ke 32.5 75 0.0016 32.7 5.2 56 341-397 9-64 (279)
437 COG0520 csdA Selenocysteine ly 32.4 6.9E+02 0.015 27.2 18.1 204 191-424 28-239 (405)
438 cd00952 CHBPH_aldolase Trans-o 32.2 63 0.0014 33.9 4.6 50 347-396 23-72 (309)
439 PF01301 Glyco_hydro_35: Glyco 31.9 82 0.0018 33.2 5.5 19 385-403 63-81 (319)
440 PRK13506 formate--tetrahydrofo 31.4 4.2E+02 0.0091 30.2 10.9 89 303-403 330-428 (578)
441 COG2102 Predicted ATPases of P 31.3 3.1E+02 0.0067 27.3 8.8 102 277-403 4-117 (223)
442 PLN02759 Formate--tetrahydrofo 28.9 2.4E+02 0.0053 32.2 8.6 48 197-248 279-326 (637)
443 PRK11633 cell division protein 28.2 2.1E+02 0.0045 28.6 7.2 48 575-625 164-213 (226)
444 TIGR03812 tyr_de_CO2_Arch tyro 26.2 6.4E+02 0.014 26.4 11.4 30 143-172 2-31 (373)
445 cd07021 Clp_protease_NfeD_like 26.0 1.1E+02 0.0024 29.2 4.8 75 352-446 15-94 (178)
446 COG1066 Sms Predicted ATP-depe 25.0 8.8E+02 0.019 26.7 11.5 81 313-403 122-215 (456)
447 PRK10927 essential cell divisi 24.5 1.8E+02 0.0039 30.4 6.1 46 575-626 262-308 (319)
448 PF14488 DUF4434: Domain of un 24.3 2.8E+02 0.0061 26.1 7.1 57 348-404 15-84 (166)
449 PRK15424 propionate catabolism 23.9 1E+03 0.022 27.1 12.6 50 311-368 108-157 (538)
450 TIGR00884 guaA_Cterm GMP synth 23.3 8.7E+02 0.019 25.4 13.3 35 260-295 4-38 (311)
451 cd05565 PTS_IIB_lactose PTS_II 23.0 1.2E+02 0.0026 26.0 4.0 52 371-440 4-56 (99)
452 PF06620 DUF1150: Protein of u 22.6 2.9E+02 0.0063 22.6 5.8 65 330-400 7-71 (76)
453 COG0616 SppA Periplasmic serin 21.2 3.1E+02 0.0068 28.8 7.5 84 349-456 79-171 (317)
454 COG0722 AroG 3-deoxy-D-arabino 21.2 8.9E+02 0.019 25.5 10.3 35 349-383 241-276 (351)
No 1
>KOG0629|consensus
Probab=100.00 E-value=6.7e-99 Score=764.05 Aligned_cols=490 Identities=51% Similarity=0.910 Sum_probs=462.4
Q ss_pred CccccccccCCCCc-hHHHHHHHHHHHHHHHHHhhhhccccCCCcccccCChhHHHHhhcccCCCCCCChhHHHHHHHHH
Q psy1785 75 AGKTSGVCSYESLP-EQVRHERFFRDAFEVLLRDGVFKATSRGNKVNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTV 153 (629)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~ 153 (629)
.+.+.+..++|+.. ..+.++.|+.++++.++ +|+.+..+|+.||++|++|++|++.+++++|++|+++++|+++|+++
T Consensus 14 ~~~~~~~D~L~~~~~~~~~te~fl~~v~~~ll-~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~t 92 (510)
T KOG0629|consen 14 ATNLEARDLLPDDVAGEEVTEPFLRAVVDILL-DYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDT 92 (510)
T ss_pred hhhhHhhhccccccCCchhhHhhhHHHHHHHH-HhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHH
Confidence 45677778889855 77888999999999999 88999999999999999999999999977777777777777777777
Q ss_pred hhcccccCCcccccccccccccCCCCHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHH
Q psy1785 154 IQYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGL 233 (629)
Q Consensus 154 l~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~ 233 (629)
++|+|+|+|||||||+ .++.++.++
T Consensus 93 l~y~vKTgHprffNQl-------------------------------------------------------~~glD~~~L 117 (510)
T KOG0629|consen 93 LKYSVKTGHPRFFNQL-------------------------------------------------------SSGLDPIGL 117 (510)
T ss_pred HHhhhccCCCcchhhh-------------------------------------------------------ccCCCHHHH
Confidence 7777776666666654 445677899
Q ss_pred HHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCC
Q psy1785 234 VGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPR 312 (629)
Q Consensus 234 ~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~ 312 (629)
+++|+|+..|+|.++||.+|++..+|.++..++.++.||+. ++|+|+|||+.+|++++.+||.+.+|++|..|+...|.
T Consensus 118 ag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~ 197 (510)
T KOG0629|consen 118 AGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPP 197 (510)
T ss_pred HHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCc
Confidence 99999999999999999999999999999999999999998 59999999999999999999999999999999999999
Q ss_pred eEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHH
Q psy1785 313 LVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIAD 392 (629)
Q Consensus 313 ~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~ 392 (629)
++++||+.+|||+.|+|+++|+|+++|+.|++|+.|+|++++||++|.+.+++|..||+|.+|+|||+.|++|||+.|++
T Consensus 198 lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iad 277 (510)
T KOG0629|consen 198 LILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIAD 277 (510)
T ss_pred EEEEecccchhhHHHHHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCeEEE--ecCcccccccccccccccccccc--ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCC
Q psy1785 393 ICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNY--VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASA 468 (629)
Q Consensus 393 i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~--~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~ 468 (629)
+|++|++|+|| ||||+.+++. ++|++ |+++ |||++|||||++++|++||.+++|...++.+|++.++
T Consensus 278 iC~k~~lWmHvDAAwGGglLmS~--------k~R~kl~Gier-a~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A 348 (510)
T KOG0629|consen 278 ICEKHKLWMHVDAAWGGGLLMSR--------KHRHKLTGIER-ANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSA 348 (510)
T ss_pred HHHhcCEEEEeecccccccccCh--------hhHhhccCccc-cCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccch
Confidence 99999999999 9999999988 78876 9999 9999999999999999999999999999999999999
Q ss_pred CccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceE
Q psy1785 469 SYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTN 547 (629)
Q Consensus 469 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~ 547 (629)
.||++++++|+.++|++++.+||||+.+++|+|++|++.|.+||++.+++++++|+||.++|++.++++++.. +|++.+
T Consensus 349 ~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~n 428 (510)
T KOG0629|consen 349 IYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVN 428 (510)
T ss_pred hhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999999888873 489999
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
|||||.|+++|+.+++.+...+|.++++.|+++|+++|..||+|+|+..+++|||++++|+..+++|+|+++++|+++++
T Consensus 429 v~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlgq 508 (510)
T KOG0629|consen 429 VCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLGQ 508 (510)
T ss_pred EeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred cC
Q psy1785 628 DL 629 (629)
Q Consensus 628 ~l 629 (629)
+|
T Consensus 509 ~l 510 (510)
T KOG0629|consen 509 DL 510 (510)
T ss_pred CC
Confidence 86
No 2
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=1.5e-80 Score=683.71 Aligned_cols=464 Identities=23% Similarity=0.316 Sum_probs=412.1
Q ss_pred chHHHHHHHHHHHHHHHHHhhhhccccC--CCcccccCChhHHHHhhcccCCCCCCChhHHHHHHHHHhhcccccCCccc
Q psy1785 88 PEQVRHERFFRDAFEVLLRDGVFKATSR--GNKVNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTVIQYSVKTGHPYF 165 (629)
Q Consensus 88 ~~~~~~~~~~~~~~d~l~~~~~~~~~~~--~~~V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l~y~v~t~hP~F 165 (629)
-+.+++++.+++++|++. +|++...++ ..||+.+.+|+++++.++
T Consensus 54 m~~~~~r~~~~~~~d~i~-~~~~~~~~~~~~~pv~~~~~p~~l~~~l~-------------------------------- 100 (539)
T PLN02590 54 MDSELLREQGHIMVDFIA-DYYKNLQDSPQDFPVLSQVQPGYLRDMLP-------------------------------- 100 (539)
T ss_pred CCHHHHHHHHHHHHHHHH-HHHhhccccccCCCCCCCCChHHHHHhcC--------------------------------
Confidence 455899999999999999 899887762 238888888877777776
Q ss_pred ccccccccccCCCCHHHHHHhhccCCCCCCCCHHHHHHHHHHH-hcccccCCCCccccccCCCCChHHHHHHHHHHhcCC
Q psy1785 166 VNQLFSSKVNEWVNPEELEKKLELGFNAGPSSHAKLIDLMKTV-IQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNP 244 (629)
Q Consensus 166 ~~~l~s~~v~~~~~~~~l~~~~~~~lp~~~~~~~~il~~l~~~-~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~ 244 (629)
.++|+.|++.+++++.+.+. +.+..+++||+|++|++++.++++++++++++++|+
T Consensus 101 -----------------------~~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa~n~ 157 (539)
T PLN02590 101 -----------------------DSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSV 157 (539)
T ss_pred -----------------------CCCCCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHhccc
Confidence 45566666666666666554 444455689999999999999999999999999999
Q ss_pred CccccccChhHHHHHHHHHHHHHHHhCCCC-------CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEE
Q psy1785 245 SVYTYEVSPVFSLMEEHVLAQMRTIVGFQG-------GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYT 317 (629)
Q Consensus 245 ~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~-------~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~ 317 (629)
+++.|+.+|..+++|.++++|+++++|+++ ++|+|++|||+||++|+.+||+++.+. .|....|+++||+
T Consensus 158 ~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~---~g~~~~~~~vvy~ 234 (539)
T PLN02590 158 VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKK---VGKTLLPQLVVYG 234 (539)
T ss_pred ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhh---hcccCCCCEEEEe
Confidence 999999999999999999999999999996 679999999999999999999976543 3443458899999
Q ss_pred cCCcchHHHHHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH
Q psy1785 318 SEDAHYSIKKLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA 395 (629)
Q Consensus 318 s~~~H~Si~kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~ 395 (629)
|+++|||+.|+++++|+|.++|+.||+|. +++||+++|+++|++++++|..|++|++|+|||.+|+||||++|+++|+
T Consensus 235 S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~ 314 (539)
T PLN02590 235 SDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAK 314 (539)
T ss_pred cCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHH
Confidence 99999999999999999999999999994 5799999999999999999999999999999999999999999999999
Q ss_pred HcCCeEEE--ecCcccccccccccccccccccc--ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCcc
Q psy1785 396 EYDMADSV--TWNPHKLLTAPQQCSVFLTRRNY--VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYL 471 (629)
Q Consensus 396 ~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~--~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl 471 (629)
+||+|+|| ||||..++++ +++++ |+++ |||+++|+||||++|++||++++|++..+..+++..+.||
T Consensus 315 ~~g~WlHVDaA~GG~al~~~--------~~r~~~~Gie~-ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL 385 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACICP--------EYRKFIDGIEN-ADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYL 385 (539)
T ss_pred HhCCeEEEecchhhhhhcCh--------hhHHHhcCCcc-CCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHh
Confidence 99999999 9999998887 66665 8999 9999999999999999999999999988888889999999
Q ss_pred ccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEE
Q psy1785 472 FQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFW 551 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~ 551 (629)
.......+..+++.+++++||||++++|+|++|+.+|.+||++++++++++|++|.+.|++.|+|+++. +|.+++||||
T Consensus 386 ~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~-~~~l~iVcFr 464 (539)
T PLN02590 386 EFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT-TRYFSLVCFR 464 (539)
T ss_pred CCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCceEEEEEE
Confidence 654333345678999999999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred eeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 552 YIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 552 ~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
+.|+... ...++++|.+|+++|.++|.++++++.++|+. +||+|++|+.||++||+.+++.|.+.+.++
T Consensus 465 ~~~~~~~--------~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~-~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~ 533 (539)
T PLN02590 465 LAPVDGD--------EDQCNERNRELLAAVNSTGKIFISHTALSGKF-VLRFAVGAPLTEEKHVTEAWQIIQKHASKF 533 (539)
T ss_pred ecCCCCC--------HHHHHHHHHHHHHHHHhCCCEEEEeeEECCEE-EEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 9875421 12356778899999999999999999999975 999999999999999999999999887653
No 3
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=3.1e-75 Score=641.79 Aligned_cols=460 Identities=21% Similarity=0.315 Sum_probs=406.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhccccCCCcccccCChhHHHHhhcccCCCCCCChhHHHHHHHHHhhcccccCCcccccc
Q psy1785 89 EQVRHERFFRDAFEVLLRDGVFKATSRGNKVNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTVIQYSVKTGHPYFVNQ 168 (629)
Q Consensus 89 ~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l~y~v~t~hP~F~~~ 168 (629)
+.+++++.+++++|++. +|+....++ ||..+..|+++++.++
T Consensus 11 ~~~~~~~~~~~~~~~~~-~~~~~~~~~--pv~~~~~p~~l~~~~~----------------------------------- 52 (490)
T PLN02880 11 DAEQLRECGHRMVDFIA-DYYKSIENF--PVLSQVQPGYLRELLP----------------------------------- 52 (490)
T ss_pred CHHHHHHHHHHHHHHHH-HHHhccccC--CCCCCCCHHHHHHhcc-----------------------------------
Confidence 44689999999999998 899887776 7888888888877776
Q ss_pred cccccccCCCCHHHHHHhhccCCCCCCCCHHHHHHHHHH-HhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCcc
Q psy1785 169 LFSSKVNEWVNPEELEKKLELGFNAGPSSHAKLIDLMKT-VIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVY 247 (629)
Q Consensus 169 l~s~~v~~~~~~~~l~~~~~~~lp~~~~~~~~il~~l~~-~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~ 247 (629)
..+|+.|.+.+++++.+.+ ++.+.++++||+|+||+++++++.+++++++++.+|+++.
T Consensus 53 --------------------~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~ 112 (490)
T PLN02880 53 --------------------DSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGF 112 (490)
T ss_pred --------------------ccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhccCCc
Confidence 4455566666666766654 4555666788999999999999999999999999999999
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCCC-------CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCC
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQG-------GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSED 320 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~~-------~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~ 320 (629)
.|+.+|..+.+|.++++|+++++|++. ++|++|+|||++|++|+.+||++.+.+ .|....++++||+|++
T Consensus 113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~---~g~~~~~~~vv~~S~~ 189 (490)
T PLN02880 113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRK---VGKNALEKLVVYASDQ 189 (490)
T ss_pred ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHH---hcccccCCeEEEEcCC
Confidence 999999999999999999999999996 479999999999999999999986533 3333346889999999
Q ss_pred cchHHHHHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcC
Q psy1785 321 AHYSIKKLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYD 398 (629)
Q Consensus 321 ~H~Si~kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~ 398 (629)
+|||+.|+++++|+|.++|+.||+|. +++||+++|+++|+++.++|..|++|++|+|||.+|++|||++|+++|++||
T Consensus 190 aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~ 269 (490)
T PLN02880 190 THSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG 269 (490)
T ss_pred chHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence 99999999999999999999999985 6799999999999999999999999999999999999999999999999999
Q ss_pred CeEEE--ecCcccccccccccccccccccc--ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 399 MADSV--TWNPHKLLTAPQQCSVFLTRRNY--VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 399 ~~lhV--A~gg~~l~~~~~~~~~~l~~~~~--~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
+|+|| ||||..++++ ++++. |++. |||+++|+||||++|++||++++|++..+..++...+.||.+.
T Consensus 270 iwlHVDaA~gg~~~~~~--------~~~~~l~gie~-aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~ 340 (490)
T PLN02880 270 MWFHVDAAYAGSACICP--------EYRHYIDGVEE-ADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNK 340 (490)
T ss_pred CEEEEehhhHHHHHhCH--------HHHHHhcCchh-cCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCc
Confidence 99999 9999988776 55544 7888 9999999999999999999999999877777888899999875
Q ss_pred CcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeC
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIP 554 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p 554 (629)
.......+++.++++++|||++++++|++|+.+|.+|+++++++++++|+++.+.|++.++|+++. +|.+++||||+.|
T Consensus 341 ~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~-~~~~~iv~Fr~~~ 419 (490)
T PLN02880 341 ASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT-PRIFSLVCFRLVP 419 (490)
T ss_pred cccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec-CCceEEEEEEEeC
Confidence 433344578899999999999999999999999999999999999999999999999999999998 8899999999987
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.... ...++++|.++.++|.++|.++++.+.+.|+. +||+|++|+.+|++||+.+++.|++++++
T Consensus 420 ~~~~--------~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~-~lR~~~~n~~tt~~di~~~~~~i~~~~~~ 484 (490)
T PLN02880 420 PKNN--------EDNGNKLNHDLLDAVNSSGKIFISHTVLSGKY-VLRFAVGAPLTEERHVTAAWKVLQDEASK 484 (490)
T ss_pred CCCC--------hhhHHHHHHHHHHHHHhCCCEEEEEEEECCEE-EEEEEecCCCCCHHHHHHHHHHHHHHHHH
Confidence 5321 12356677899999999999999999999874 99999999999999999999999998765
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=1.8e-65 Score=565.21 Aligned_cols=419 Identities=29% Similarity=0.448 Sum_probs=355.3
Q ss_pred cCCCCCCCCHHHHHHHH-HHHhcccccCCCCccccccCCC-CChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHH
Q psy1785 189 LGFNAGPSSHAKLIDLM-KTVIQYSVKTGHPYFVNQLFSS-VDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQM 266 (629)
Q Consensus 189 ~~lp~~~~~~~~il~~l-~~~~~~~~~~~~p~~~g~~~s~-~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l 266 (629)
..+|+.|...+++++.+ +.++.++++++||+|+||++++ +.....+++ +++++|+|+..|+.+|.++.+|.++++|+
T Consensus 60 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl 138 (522)
T TIGR03799 60 AEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMM 138 (522)
T ss_pred cCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHH
Confidence 35677777777777664 4566777778888888888886 333344666 67789999999999999999999999999
Q ss_pred HHHhCC------------C-CCCeEEeCCchhhHHHHHHHHHHhhchh------HHhcCCC------CCCCeEEEEcCCc
Q psy1785 267 RTIVGF------------Q-GGDGIFCPGGSMANGYAISCARHHAFPQ------IKTQGLA------SCPRLVLYTSEDA 321 (629)
Q Consensus 267 ~~l~G~------------~-~~~g~~~~GgT~an~~al~~ar~~~~~~------~~~~G~~------~~p~~vv~~s~~~ 321 (629)
+++++. + .+.|+||+|||+||++|+++||+++++. .+++|+. ..++.+|++|..+
T Consensus 139 ~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~ 218 (522)
T TIGR03799 139 HHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERG 218 (522)
T ss_pred HHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCc
Confidence 999952 1 2579999999999999999999986542 3344543 1357899999999
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeE
Q psy1785 322 HYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMAD 401 (629)
Q Consensus 322 H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~l 401 (629)
|+|+.|+++++|+|.++++.||+|++|+||+++|+++|+++.++|..|+.|++++|+|.+|++|||++|+++|+++|+|+
T Consensus 219 H~S~~kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~l 298 (522)
T TIGR03799 219 HYSLGKAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHF 298 (522)
T ss_pred hHHHHHHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeE
Confidence 99999999999999999999999999999999999999999888989999999999999999999999999999999999
Q ss_pred EE--ecCcccccccccccccccccccc--ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNY--VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~--~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
|| ||++..++++ +++++ +++. |||+++|+|||+++|++||++++|++..+ ..+...+.|+....
T Consensus 299 HVDaA~gg~~~~~~--------~~r~~l~gle~-aDSit~d~HK~l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~-- 366 (522)
T TIGR03799 299 HVDAAWGGATLLSN--------TYRHLLKGIER-ADSVTIDAHKQLYVPMGAGMVLFKDPALM-SAIEHHAEYILRKG-- 366 (522)
T ss_pred EEEchhhhHHHhCH--------HHHHHhcCchh-CCEEEEChhhcCCcCcccEEEEEeCHHHH-HHhccCcchhcCCC--
Confidence 99 8998887766 55554 7788 99999999999999999999999997654 45667788985432
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~ 557 (629)
..+++++++++||++.++++|++|+.+|.+|++++++++++++++|.+.|++.|+|+++. +|.+++||||+.|..+
T Consensus 367 ---~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~-~p~l~iv~Fr~~p~~~ 442 (522)
T TIGR03799 367 ---SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVT-EPELCLLTYRYVPEEV 442 (522)
T ss_pred ---CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEec-CCCccEEEEEEeChhh
Confidence 246778899999999999999999999999999999999999999999999999999998 8999999999998765
Q ss_pred CCCC------chhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC-----Cc-cceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 558 RGKE------DQADFNELLHKVAPKIKERMMKSGSMMITYQPIH-----AL-PNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 558 ~~~~------~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~-----~~-~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
+... ...+.+..++++|.+|+++++++|.++++.+.+. ++ ..+||+|++||.||++||+.++++-++
T Consensus 443 ~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~~~~ 521 (522)
T TIGR03799 443 QQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDEQRE 521 (522)
T ss_pred cccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHHhhc
Confidence 4210 1122345578899999999999999999988765 32 258999999999999999999987543
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=1.4e-66 Score=555.29 Aligned_cols=361 Identities=37% Similarity=0.607 Sum_probs=322.6
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHHHHHhccccc-CCCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHH
Q psy1785 180 PEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSVK-TGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLM 258 (629)
Q Consensus 180 ~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~~-~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~ 258 (629)
|++|++.++..+|+.|.+.++|++++++.+.+.+. ++||+|+++++++++++++++++++..+|+|...++.+|..+.+
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 56677788899999999999999999887766655 46799999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCC-------CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 259 EEHVLAQMRTIVGFQ-------GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 259 E~~~~~~l~~l~G~~-------~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
|.++++|+++++|++ .++|++|+|||++|++|+++||+++.++.+..|....+++++++|+++|||+.|++++
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence 999999999999999 2679999999999999999999999998888886434688999999999999999999
Q ss_pred cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 332 EGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 332 lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
+|+| ++.||+|++|+||+++|+++|+++.++|..|++|++++|||.+|++|||++|+++|+++++|+|| ||||..
T Consensus 161 lGlg---~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg~~ 237 (373)
T PF00282_consen 161 LGLG---VRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGGSA 237 (373)
T ss_dssp TTSE---EEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGGGG
T ss_pred eeeE---EEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccccc
Confidence 9995 99999999999999999999999999999999999999999999999999999999999999999 899988
Q ss_pred ccccccccccccccccc--ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 410 LLTAPQQCSVFLTRRNY--VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~--~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
++++ .++++ |+++ |||+++|+||||++|++||++++|++..+..+++.++.|+......++..++++++
T Consensus 238 ~~~~--------~~~~~~~gi~~-adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~ 308 (373)
T PF00282_consen 238 LLSP--------EYRHLLFGIER-ADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDY 308 (373)
T ss_dssp GGHC--------TTGGGGTTGGG-ESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEG
T ss_pred cccc--------ccccccccccc-ccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccc
Confidence 8877 55554 8999 99999999999999999999999999888888888999999777667778899999
Q ss_pred cCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee
Q psy1785 488 HIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 488 ~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~ 553 (629)
+++|||+++++++|++|+.+|.+||++++++++++|++|+++|++.++|+++. +|.+++|||||+
T Consensus 309 tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~-~~~~~~vcFr~k 373 (373)
T PF00282_consen 309 TLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVN-EPDLNIVCFRYK 373 (373)
T ss_dssp SSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESS-TTSSSEEEEEES
T ss_pred cccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEc-CCCceEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998 899999999984
No 6
>KOG0628|consensus
Probab=100.00 E-value=3e-65 Score=524.60 Aligned_cols=451 Identities=23% Similarity=0.330 Sum_probs=411.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhccccCCCcccccCChhHHHHhhcccCCCCCCChhHHHHHHHHHhhcccccCCcccccc
Q psy1785 89 EQVRHERFFRDAFEVLLRDGVFKATSRGNKVNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTVIQYSVKTGHPYFVNQ 168 (629)
Q Consensus 89 ~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l~y~v~t~hP~F~~~ 168 (629)
+.+++++.++.++|.+. ||+++.++| ||+
T Consensus 2 d~~efR~~gk~mVD~Ia-dY~e~ir~r--~v~------------------------------------------------ 30 (511)
T KOG0628|consen 2 DSEEFREEGKEMVDYIA-DYLENIRKR--RVL------------------------------------------------ 30 (511)
T ss_pred CHHHHHHHHHHHHHHHH-HHHHhhhcc--CCC------------------------------------------------
Confidence 46789999999999998 899998887 443
Q ss_pred cccccccCCCCHHHHHHhhccCCCCCCCCHHHHHHHHHHHhccccc-CCCCccccccCCCCChHHHHHHHHHHhcCCCcc
Q psy1785 169 LFSSKVNEWVNPEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSVK-TGHPYFVNQLFSSVDPYGLVGQWLADALNPSVY 247 (629)
Q Consensus 169 l~s~~v~~~~~~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~~-~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~ 247 (629)
|.+.|..|+..++.+.|+.|+++++|++++++++.+++. |+||+|+.|++++.+..++++++++..++.-++
T Consensus 31 -------P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyfpa~~s~~siladmLs~~i~~vGF 103 (511)
T KOG0628|consen 31 -------PDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYFPAGNSYPSILADMLSGGIGCVGF 103 (511)
T ss_pred -------CCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEccCccchHHHHHHHHhcccccccc
Confidence 445566777777788999999999999999998877754 699999999999999999999999999999999
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCCC---------CCeEEeCCchhhHHHHHHHHHHhhchhHHhcC--C---CCCCCe
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQG---------GDGIFCPGGSMANGYAISCARHHAFPQIKTQG--L---ASCPRL 313 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~~---------~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G--~---~~~p~~ 313 (629)
+|..+|..+++|..+.+|+++++++|. ++|++...+|++++.++.+||.+++.+.++.- + ....++
T Consensus 104 tW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l 183 (511)
T KOG0628|consen 104 TWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARL 183 (511)
T ss_pred eeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence 999999999999999999999999984 68999999999999999999999887776542 0 024689
Q ss_pred EEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHH
Q psy1785 314 VLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADI 393 (629)
Q Consensus 314 vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i 393 (629)
|+|+|.++|.|++|+|-+.|+ +++.+++|.+..|+.+.|+++|+++.++|.+||+|++|.|||...++|+|.++..+
T Consensus 184 V~Y~SDqahssveka~~i~~V---klR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGV---KLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPV 260 (511)
T ss_pred eEEecCcccchHHHhHhhcce---eEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcch
Confidence 999999999999999999999 89999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCeEEE--ecCcccccccccccccccccccc--ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCC
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNY--VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~--~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
|+++|+|+|| ||.|.++.++ +++.+ |++. |||+.+|+|||+.+.+.|+.+++|++..+..+++..+-
T Consensus 261 c~~~glWLHVDAAYAGsa~iCp--------E~r~l~rGie~-aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~ 331 (511)
T KOG0628|consen 261 CREEGLWLHVDAAYAGSAFICP--------EFRYLMRGIEY-ADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPL 331 (511)
T ss_pred hhhcCEEEEeehhhccccccCH--------HHHHHhhcchh-hccccCChhheeEEeeeeecceeecCceeeeeeecChH
Confidence 9999999999 8999998888 78887 9999 99999999999999999999999999888889999999
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEE
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNIS 549 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~ 549 (629)
||.+....+ ..|+..|.+..|||++++|+|+.++.+|.+++++++++..+||+.+.+.+.+.+.||++. +..++.||
T Consensus 332 yL~h~~~~~--~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~-~~~lgLvc 408 (511)
T KOG0628|consen 332 YLKHAYQGS--APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVN-KRILGLVC 408 (511)
T ss_pred hhcchhhcc--CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeec-ccccceeE
Confidence 998876543 789999999999999999999999999999999999999999999999999999999998 88999999
Q ss_pred EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 550 FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 550 F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
||.++. |++|.++.++++.+|.+.+....+.|+ .+||++++++.++++||++.++.|.+.+.+
T Consensus 409 FRlk~~---------------N~~ne~Ll~~in~~g~i~l~~~~l~gk-~vlRf~V~s~~t~~~di~~a~~~I~~~a~~ 471 (511)
T KOG0628|consen 409 FRLKGD---------------NEINEALLNRLNSSGRIHLVPASLHGK-FVLRFAVCSPLTNESDIDEAWKIIFEAADE 471 (511)
T ss_pred EeecCC---------------cHHHHHHHHHHHhcCcEEEEEeeecce-EEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 998653 345668899999999999998889887 499999999999999999999999988765
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=4.6e-61 Score=533.58 Aligned_cols=478 Identities=19% Similarity=0.236 Sum_probs=376.4
Q ss_pred ccccccccCCCCchHHHHHHHHHHHHHHHHHhhhhccccCCCcccccCChhHHHHhhcccCCCCCCChhHHHHHHHHHhh
Q psy1785 76 GKTSGVCSYESLPEQVRHERFFRDAFEVLLRDGVFKATSRGNKVNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTVIQ 155 (629)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l~ 155 (629)
-.+.++||=|..++.+.+++.+.+++|.++ +..++-... +|
T Consensus 2 ~~~~a~flgpk~en~~~~~~~~~~~~~~~~-~~r~~~~p~-d~------------------------------------- 42 (608)
T TIGR03811 2 LNLNALFIGDKAENGQLYKDLLNKLVDEHL-GWRQNYMPQ-DK------------------------------------- 42 (608)
T ss_pred CChhheeecCcccCHHHHHHHHHHHHHHHH-HHHHhcCCC-CC-------------------------------------
Confidence 357899999999999999999999999998 544431110 00
Q ss_pred cccccCCcccccccccccccCCCCHHHHHHhhccCCCCCCCCHHHHHHHHHHH-hcccccCCCC-ccccccCCCCChHHH
Q psy1785 156 YSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLELGFNAGPSSHAKLIDLMKTV-IQYSVKTGHP-YFVNQLFSSVDPYGL 233 (629)
Q Consensus 156 y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~~lp~~~~~~~~il~~l~~~-~~~~~~~~~p-~~~g~~~s~~~~~~~ 233 (629)
+.++++.+++ .++.......+++++.+.+. ...++.++|| +|+||+++.+.++++
T Consensus 43 --------------------~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~ghm~~~~~~pai 99 (608)
T TIGR03811 43 --------------------PVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYWGHMNSETLMPAI 99 (608)
T ss_pred --------------------CCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceEEECcCCCCHHHH
Confidence 1122233222 12333445688889888765 4677888999 999999999999999
Q ss_pred HHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhh-chhH----------
Q psy1785 234 VGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHA-FPQI---------- 302 (629)
Q Consensus 234 ~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~-~~~~---------- 302 (629)
+|++++.++|+|+..|+.+|.++.+|.++++|+++++|++.++|+||+|||+||+.|+++||+.+ +|-.
T Consensus 100 la~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~ 179 (608)
T TIGR03811 100 LAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVA 179 (608)
T ss_pred HHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999854 2211
Q ss_pred -----------------------------HhcCCC---CCCCe-EEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCC
Q psy1785 303 -----------------------------KTQGLA---SCPRL-VLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGR 349 (629)
Q Consensus 303 -----------------------------~~~G~~---~~p~~-vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~ 349 (629)
++.|.. ...++ ++++|+++|||+.|++.++|+|.++|+.||+|++++
T Consensus 180 ~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~~r 259 (608)
T TIGR03811 180 GKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSNYR 259 (608)
T ss_pred cccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCCCc
Confidence 111100 01223 799999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHH---HHcCC--eEEE--ecCccc--cccc------c
Q psy1785 350 MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADIC---AEYDM--ADSV--TWNPHK--LLTA------P 414 (629)
Q Consensus 350 ~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~---~~~~~--~lhV--A~gg~~--l~~~------~ 414 (629)
||+++|+++|+++.++|..|++||+++|||.+|+||||++|+++| +++|+ |+|| ||||.. ++.+ |
T Consensus 260 md~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p 339 (608)
T TIGR03811 260 MDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIP 339 (608)
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccc
Confidence 999999999999999998899999999999999999999999999 67888 6999 999975 3322 1
Q ss_pred cc-c-------ccc------c--cccc-c-ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 415 QQ-C-------SVF------L--TRRN-Y-VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 415 ~~-~-------~~~------l--~~~~-~-~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
++ . ..| + ++++ + |+++ ||||++|+|||+++|++||++++|++. +...++..++|++....
T Consensus 340 ~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~-ADSItvDpHK~g~~Py~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~ 417 (608)
T TIGR03811 340 YDDLQEVHAEYGVFTEKKEYISREVYNAYKAISE-AESVTIDPHKMGYIPYSAGGIVIQDIR-MRDVISYFATYVFEKGA 417 (608)
T ss_pred cchhhcccccccccccccccccHhHHHHHhcCcC-ceEEEeCcccccccCCCeEEEEEeCHH-HHHHHhcCcchhccccc
Confidence 10 0 000 0 1222 3 8999 999999999999999999999999986 55667889999976432
Q ss_pred CCCcccCCCCccCCCCCC-cchHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHHhc------CCCcEE--EccCCCc
Q psy1785 477 FYDTKYDSGDKHIQCGRK-PDVLKFWFMWKAK--GTDGLEAHIDKSFDNAKYFTDKIRH------RPGFKL--VLDEPEC 545 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~-~~al~~w~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~------~~g~~l--~~~~p~~ 545 (629)
+.....++++++++|+ ++++++|++++.+ |.+||++++++++++|++|.+.|++ .+.|++ +. +|++
T Consensus 418 --~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~-~pdl 494 (608)
T TIGR03811 418 --DIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLT-KPDF 494 (608)
T ss_pred --cCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecC-CCCc
Confidence 1122467788889987 5799999999998 9999999999999999999999998 466776 56 7999
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHH-hcC-----cEEEeeeecC------------------------
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMM-KSG-----SMMITYQPIH------------------------ 595 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G-----~~~i~~~~~~------------------------ 595 (629)
++||||+.|.+.+. -+.+|++|.+|.+++. ..| -++++.+.+.
T Consensus 495 niV~Fr~~~~g~~~-------l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~~~~~~~~~~~~~~ 567 (608)
T TIGR03811 495 NMVDYVFNEKGNDD-------LVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAFVNSLGFSDEEWQR 567 (608)
T ss_pred ceEEEEEecCCCcc-------HHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHHHHHcCCChhhhcc
Confidence 99999999876321 1346777788888876 222 2333322110
Q ss_pred -CccceEEEeecCCCCCH-HHHHHHHHHHHHHhh
Q psy1785 596 -ALPNFFRLVLQNSALDH-SDMDYFIDEIERLGH 627 (629)
Q Consensus 596 -~~~~~lR~~~~n~~~t~-edid~l~~~i~~l~~ 627 (629)
+...+||.++|||+.++ +.++.+++.|+....
T Consensus 568 ~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~ 601 (608)
T TIGR03811 568 AGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQ 601 (608)
T ss_pred CCceEEEEEEecCcccCChhhHHHHHHHHHHHHH
Confidence 23468999999998765 778888888876554
No 8
>PLN02263 serine decarboxylase
Probab=100.00 E-value=1.1e-50 Score=436.19 Aligned_cols=351 Identities=21% Similarity=0.289 Sum_probs=296.2
Q ss_pred HHHHHHHHHHHhcccccCCCCccccccCCCCCh-HHHHHHHHHHhcCCCccccccCh---hHHHHHHHHHHHHHHHhCCC
Q psy1785 198 HAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDP-YGLVGQWLADALNPSVYTYEVSP---VFSLMEEHVLAQMRTIVGFQ 273 (629)
Q Consensus 198 ~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~-~~~~~~~lt~~~n~~~~~~~~~p---~~~~~E~~~~~~l~~l~G~~ 273 (629)
.+++++.+.+.+.... ..|+|| |.+.+. ++.+++++...+|+-+..|..+| .+.++|.++++|+++|+|++
T Consensus 75 ~~~~l~~~~~~~~~~~----~~~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p 149 (470)
T PLN02263 75 MASVLARYRKTLVERT----KHHLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIE 149 (470)
T ss_pred HHHHHHHHHHHHHhcc----cceeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCC
Confidence 4777777776664432 238898 777777 89999999999998888888888 69999999999999999997
Q ss_pred C--CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCC
Q psy1785 274 G--GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRML 351 (629)
Q Consensus 274 ~--~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d 351 (629)
. .+|++|+|||++|++|+++||+.. +..++++|.++|||+.|+++++|+ +++.||+|++|+||
T Consensus 150 ~~~~~G~vtsGGTEaNL~Al~aARe~~------------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~~g~mD 214 (470)
T PLN02263 150 KNEYWGYITNCGTEGNLHGILVGREVF------------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLVSGEID 214 (470)
T ss_pred CCCCeEEEeCcHHHHHHHHHHHHHhhc------------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCCCCcCc
Confidence 5 479999999999999999999862 455899999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCC-----eEEE--ecCcccccccccccccccccc
Q psy1785 352 PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDM-----ADSV--TWNPHKLLTAPQQCSVFLTRR 424 (629)
Q Consensus 352 ~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~-----~lhV--A~gg~~l~~~~~~~~~~l~~~ 424 (629)
+++|+++|.++ ...|++|++++|||.+|++|||++|+++|+++|+ |+|| ||||..+++. +..
T Consensus 215 ~~aL~~aI~~d---~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~--------~~~ 283 (470)
T PLN02263 215 CADFKAKLLAN---KDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFV--------KRA 283 (470)
T ss_pred HHHHHHHHHhC---CCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhc--------ccc
Confidence 99999999764 3479999999999999999999999999999997 9999 9999877432 221
Q ss_pred -cc-ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-chHHHH
Q psy1785 425 -NY-VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFW 501 (629)
Q Consensus 425 -~~-~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~w 501 (629)
.+ +.+. |||+++|+|||+++|++||++++|++ .+ .+++..++|+...+ .++++||++ .++++|
T Consensus 284 ~~~df~~~-vDSIsvD~HK~l~~P~~cgvll~R~~-~~-~~~~~~~~Yl~~~d-----------~ti~gSR~g~~al~lW 349 (470)
T PLN02263 284 PKVTFKKP-IGSVSVSGHKFVGCPMPCGVQITRME-HI-NVLSSNVEYLASRD-----------ATIMGSRNGHAPIFLW 349 (470)
T ss_pred cccCCCcC-ccEEEECCccccCCCcCEEEEEEehh-hH-hhhccChHhhCCCC-----------CCcCCCCCcHHHHHHH
Confidence 12 3455 99999999999999999999999974 33 46677889997542 478899997 589999
Q ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHH
Q psy1785 502 FMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERM 581 (629)
Q Consensus 502 ~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l 581 (629)
++|+.+|.+||++++++++++|++|.++|+++ |++++. +|..++|+|+- |. ..+
T Consensus 350 ~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~-~p~s~~V~f~~-p~-----------------------~~~ 403 (470)
T PLN02263 350 YTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAML-NELSSTVVFER-PK-----------------------DEE 403 (470)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEe-CCCceEEEEec-Cc-----------------------hHH
Confidence 99999999999999999999999999999998 888887 79999999973 21 011
Q ss_pred HhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 582 MKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 582 ~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..+|+-+ +. . ++.+|++++ |+.+++.+|.|++.|++..
T Consensus 404 ~~~gW~L-~~--~---~~~~Hivvm-phv~~~~id~fi~DL~~~~ 441 (470)
T PLN02263 404 FVRRWQL-AC--Q---GNIAHVVVM-PSVTIEKLDYFLKELVEKR 441 (470)
T ss_pred hhcceEE-cc--C---CCcEEEEEc-CCCCHHHHHHHHHHHHHHH
Confidence 2356532 21 1 246999998 9999999999999998653
No 9
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-50 Score=434.72 Aligned_cols=408 Identities=23% Similarity=0.307 Sum_probs=325.9
Q ss_pred ccCCCCCCCCHHHHHHHHHHH-hccccc-CCCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHH
Q psy1785 188 ELGFNAGPSSHAKLIDLMKTV-IQYSVK-TGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQ 265 (629)
Q Consensus 188 ~~~lp~~~~~~~~il~~l~~~-~~~~~~-~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~ 265 (629)
...+|+.+.+.+.++..+... +..... ++||++..+..+...+..++++.+..++|+|...++.+|.+..+|++++.|
T Consensus 30 ~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~ 109 (460)
T COG0076 30 SRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNM 109 (460)
T ss_pred hccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHH
Confidence 357888899999999998766 333333 358999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec
Q psy1785 266 MRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT 344 (629)
Q Consensus 266 l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~ 344 (629)
+++|+|++. ..|+||+|||++|++|+++||++..+...+.+........|++|.++|+|+.|+++++|+ .++.+++
T Consensus 110 l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~ 186 (460)
T COG0076 110 LSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGL---GLRRVPT 186 (460)
T ss_pred HHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCC---CceeEEe
Confidence 999999954 789999999999999999999987654443222111233799999999999999999999 5555555
Q ss_pred CC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccc
Q psy1785 345 DA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 345 d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l 421 (629)
+. +.+||+++|+++|++....| .|++++|||.+|++|||++|+++|+++++|+|| ||||+.+++...
T Consensus 187 ~~~~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~------ 256 (460)
T COG0076 187 VPTDYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEP------ 256 (460)
T ss_pred ccCccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCc------
Confidence 55 89999999999999987766 799999999999999999999999999999999 999998855410
Q ss_pred ccc-ccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-chHH
Q psy1785 422 TRR-NYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLK 499 (629)
Q Consensus 422 ~~~-~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~ 499 (629)
..+ .+++++ ||||++|+|||+++|++||++++|+++.+.+.......|+... ...+.++.++|.. .+++
T Consensus 257 ~~~~~f~l~~-vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~--------~~~~~ti~~sr~~~~~~~ 327 (460)
T COG0076 257 DGRWDFGLEG-VDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGG--------GIPNFTILGSRPGRQALA 327 (460)
T ss_pred cchhhcCCCC-ceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCC--------CcCceeEeeccchHHHHH
Confidence 122 237888 9999999999999999999999999876777666666676542 2445677888887 8999
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHH
Q psy1785 500 FWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKE 579 (629)
Q Consensus 500 ~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~ 579 (629)
+|+.++.+|.+||+++++++++++++|+++|++.+.|+++. +|.+++||||+++.. + . ..+....+++.+-.+..
T Consensus 328 ~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~-~p~l~~V~fr~~~~~-~-~--~~~~~~~~~~~gw~v~~ 402 (460)
T COG0076 328 LYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVN-EPELPIVAFRLKDDE-D-T--LADLSERLDRRGWQVPA 402 (460)
T ss_pred HHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeec-CCccceEEEEcCCcc-c-c--hhchHHHHHhcCceeec
Confidence 99999999999999999999999999999999997799998 899999999994421 1 0 11122333333334445
Q ss_pred HHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 580 RMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 580 ~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
+...+|...+..+.+..+ ..+++.+.++.++.++ +.+...+..
T Consensus 403 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~ 445 (460)
T COG0076 403 QLLPKGLAIVFGTHVTGR-QGLKFIVANLLITDRE-ESLLALIEE 445 (460)
T ss_pred ccCCccceeeeeeEEeee-eeehhhcchhhhhhhh-HHHHHHhhh
Confidence 555555444444444443 3677777777777777 666655554
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=6.4e-49 Score=425.54 Aligned_cols=397 Identities=14% Similarity=0.180 Sum_probs=324.2
Q ss_pred cCCCCCCCCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHH
Q psy1785 189 LGFNAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRT 268 (629)
Q Consensus 189 ~~lp~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~ 268 (629)
..+|+.|.+.+++++.+.+.+- .....||+|++++.+.+.+. +.+++..++|.|...+..+|..+.+|+++++|+++
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iy-ld~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~ 91 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELS-LDGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLAD 91 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhh-hcCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHH
Confidence 5799999999999999987653 23456899999999888876 57888888988877788888888999999999999
Q ss_pred HhCCC-C---CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec
Q psy1785 269 IVGFQ-G---GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT 344 (629)
Q Consensus 269 l~G~~-~---~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~ 344 (629)
++|++ . ..|.+|+|||+||++|+.++|.+...+.++.|.. .++.+|++|..+|+|+.|+++.+|+ +++.||+
T Consensus 92 llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~-~~~~~ii~s~~~H~sv~ka~~~lg~---~v~~i~~ 167 (431)
T TIGR01788 92 LWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKP-TDKPNLVMGSNVQVCWEKFARYFDV---ELREVPM 167 (431)
T ss_pred HhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcEEEEcCcchHHHHHHHHHcCc---eeEEEec
Confidence 99998 2 4566799999999999999986543333444431 2356899999999999999999999 9999999
Q ss_pred CCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc------CCeEEE--ecCccccccccc
Q psy1785 345 DAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY------DMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 345 d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~------~~~lhV--A~gg~~l~~~~~ 415 (629)
|++ |.||+++|+++|.+ .+++|++++|+|.+|++|||++|+++|+++ ++|+|| |++++.+...
T Consensus 168 d~~~~~vd~~~L~~~i~~------~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~-- 239 (431)
T TIGR01788 168 DPGRYVIDPEQVVEAVDE------NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFV-- 239 (431)
T ss_pred CCCceeeCHHHHHHHHhh------CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHh--
Confidence 986 59999999999975 378999999999999999999999999999 999999 8887664221
Q ss_pred ccccccccc-ccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 416 QCSVFLTRR-NYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 416 ~~~~~l~~~-~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
++ +.+ ++.++. +||+++|+|||+++|++||++++|++..+...+...++|+... ..+.++++||+
T Consensus 240 -~~---~~~~~~~~~~-~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~---------~~~~t~~~sR~ 305 (431)
T TIGR01788 240 -YP---DLEWDFRLPR-VKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGD---------EPTFTLNFSRP 305 (431)
T ss_pred -CC---CchhhcCCCC-ceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCC---------CCCcceecCch
Confidence 11 111 113455 9999999999999999999999999765655666677888532 12357889999
Q ss_pred c-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC-CCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 495 P-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE-PECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 495 ~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~-p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
+ .++++|+.|+.+|.+|++++++++++++++|.++|++.++|+++. + |.+++|||++.+..-.+ .
T Consensus 306 g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~-~~~~~~iV~Fr~~~~~~~~----------~-- 372 (431)
T TIGR01788 306 ANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIIS-DGSGIPLVAFKLKDDADPG----------Y-- 372 (431)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEee-CCCCceEEEEEeCCCCCCC----------c--
Confidence 7 789999999999999999999999999999999999999999998 5 79999999997642101 0
Q ss_pred HHHHHHHHHHhcCcEEEeeee---cCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 573 VAPKIKERMMKSGSMMITYQP---IHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~---~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
-+.++.++|.++|+.+..+.. +.+. .++|++++ +.++++.++.|++.|+.+..+|
T Consensus 373 ~~~~l~~~L~~~G~~~~~~~~p~~~~~~-~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 373 TLYDLSHRLRERGWIVPAYTLPKNAEDI-VVMRIVVR-EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CHHHHHHHHHHCCCcccCCCCCCccCCe-EEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 124678899999986534332 4555 48999996 9999999999999999887654
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=4.4e-44 Score=380.29 Aligned_cols=337 Identities=20% Similarity=0.273 Sum_probs=265.7
Q ss_pred CCccccccCCCCChHHHHHHHHHHhcCCCcc---ccccChhHHHHHHHHHHHHHHHhCCCCC--CeEEeCCchhhHHHHH
Q psy1785 217 HPYFVNQLFSSVDPYGLVGQWLADALNPSVY---TYEVSPVFSLMEEHVLAQMRTIVGFQGG--DGIFCPGGSMANGYAI 291 (629)
Q Consensus 217 ~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~---~~~~~p~~~~~E~~~~~~l~~l~G~~~~--~g~~~~GgT~an~~al 291 (629)
+..|.||.....--++.+..++....|.-+. .+..+..+..+|+++++|+++++|++.. +|+||+|||+||++|+
T Consensus 23 ~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al 102 (374)
T PLN03032 23 SSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGI 102 (374)
T ss_pred hhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHH
Confidence 3556666655422234455555544332221 1223457899999999999999999863 5899999999999999
Q ss_pred HHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEE
Q psy1785 292 SCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFM 371 (629)
Q Consensus 292 ~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~ 371 (629)
+.+|... +..++++|..+|+|+.|+++++|+ .++.||+|++|+||+++|+++|.+. ...|++
T Consensus 103 ~~ar~~~------------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~~g~id~~~L~~~i~~~---~~~~~l 164 (374)
T PLN03032 103 LVGREVF------------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLPSGEIDYDDLERALAKN---RDKPAI 164 (374)
T ss_pred HHHHHhC------------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCCCCcCcHHHHHHHHHHc---CCCCEE
Confidence 9998752 334789999999999999999999 7899999999999999999999753 236899
Q ss_pred EEEeeCCCccccccCHHHHHHHHHHcC-----CeEEE--ecCcccccccccccccccccccc-ccCCcceEEEeCCCCCC
Q psy1785 372 VSATSGTTVLGAFDPIPAIADICAEYD-----MADSV--TWNPHKLLTAPQQCSVFLTRRNY-VIEVVADSVTWNPHKLL 443 (629)
Q Consensus 372 Vvat~Gtt~~G~idpl~ei~~i~~~~~-----~~lhV--A~gg~~l~~~~~~~~~~l~~~~~-~i~~gaDsv~~~~HK~l 443 (629)
|++++|+|.+|++|||++|+++|+++| +|+|| |++++++.... ....+ ..+ ++||+++|+|||+
T Consensus 165 vv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~-------~~~~~~~~~-~vDSis~s~HK~~ 236 (374)
T PLN03032 165 LNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVS-------RAPEVTFRK-PIGSVSVSGHKFL 236 (374)
T ss_pred EEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccC-------CCcccCCCc-CCcEEEECccccc
Confidence 999999999999999999999999996 59999 88887764320 00111 123 4999999999999
Q ss_pred CCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC-cchHHHHHHHHhcChhhHHHHHHHHHHH
Q psy1785 444 TAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK-PDVLKFWFMWKAKGTDGLEAHIDKSFDN 522 (629)
Q Consensus 444 ~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~w~~l~~~G~~G~~~~~~~~~~l 522 (629)
++|++||++++|++ .+ ..+...++|+... ++++++||+ +.++++|++|+.+|.+||++++++++++
T Consensus 237 g~P~g~G~ll~r~~-~~-~~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~ 303 (374)
T PLN03032 237 GCPMPCGVALTRKK-HV-KALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRN 303 (374)
T ss_pred CCCcCeEEEEEEch-hh-HhhccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 99999999999984 34 3456678998643 358899998 5899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEE
Q psy1785 523 AKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFR 602 (629)
Q Consensus 523 a~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR 602 (629)
|+||.++|++. +++++. +|.+++|+|+-+.. +.+ .+|+-+ +. . .+.+|
T Consensus 304 a~~l~~~l~~~-~~~~~~-~p~~~~V~f~~~~~-----------------------~~~-~~~w~l-~~--~---~~~~h 351 (374)
T PLN03032 304 AHYLKDRLTEA-GLTCRL-NELSSTVVFERPMD-----------------------EAF-IKKWQL-AC--E---GDIAH 351 (374)
T ss_pred HHHHHHHHHhC-CCcEEE-CCCceEEEEcCCCc-----------------------HhH-hheeee-cc--c---CCEEE
Confidence 99999999996 899888 89999999974310 112 245432 21 1 24799
Q ss_pred EeecCCCCCHHHHHHHHHHHHHH
Q psy1785 603 LVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 603 ~~~~n~~~t~edid~l~~~i~~l 625 (629)
+++| +++|++.||.|++.|++.
T Consensus 352 i~vm-~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 352 VVVM-PNVTVEKLDEFVEELVEV 373 (374)
T ss_pred EEEC-CCCCHHHHHHHHHHHhcc
Confidence 9999 999999999999998764
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.9e-42 Score=370.30 Aligned_cols=337 Identities=21% Similarity=0.290 Sum_probs=270.5
Q ss_pred CCCccccccCCCCCh-HHHHHHHHHHhcCCCccccccCh----hHHHHHHHHHHHHHHHhCCCC--CCeEEeCCchhhHH
Q psy1785 216 GHPYFVNQLFSSVDP-YGLVGQWLADALNPSVYTYEVSP----VFSLMEEHVLAQMRTIVGFQG--GDGIFCPGGSMANG 288 (629)
Q Consensus 216 ~~p~~~g~~~s~~~~-~~~~~~~lt~~~n~~~~~~~~~p----~~~~~E~~~~~~l~~l~G~~~--~~g~~~~GgT~an~ 288 (629)
+||+++..++...+. .+.+++++....|+.+ .+...+ .+..+|+++++|+++++|++. ..|+||+|||++|+
T Consensus 20 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~g-np~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~ 98 (380)
T PRK02769 20 HNQYFNVGYPEAADFDYSALKRFFSFSINNCG-DPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNL 98 (380)
T ss_pred HhhhcccCCCchhhcCHHHHHHHHHhhhccCC-CccccCCCCCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHH
Confidence 456655555555544 6778888887776533 333333 478999999999999999975 35899999999999
Q ss_pred HHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCC
Q psy1785 289 YAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAV 368 (629)
Q Consensus 289 ~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~ 368 (629)
+|++.+|.. .|..+|++|..+|+|+.|+++.+|+ +++.|+++++|+||+++|+++|.+. +..
T Consensus 99 ~a~~~ar~~------------~~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~~g~id~~~L~~~i~~~---~~~ 160 (380)
T PRK02769 99 YGCYLAREL------------FPDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLPNGEIDYDDLISKIKEN---KNQ 160 (380)
T ss_pred HHHHHHHHh------------CCCcEEEeCCCceehHHHHHHHcCC---CCceeccCCCCcCcHHHHHHHHHhC---CCC
Confidence 999999875 2445899999999999999999999 7888999999999999999999864 667
Q ss_pred cEEEEEeeCCCccccccCHHHHHHHHHHcC---CeEEE--ecCcccccccccccccccccc-ccccCCcceEEEeCCCCC
Q psy1785 369 PFMVSATSGTTVLGAFDPIPAIADICAEYD---MADSV--TWNPHKLLTAPQQCSVFLTRR-NYVIEVVADSVTWNPHKL 442 (629)
Q Consensus 369 ~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~---~~lhV--A~gg~~l~~~~~~~~~~l~~~-~~~i~~gaDsv~~~~HK~ 442 (629)
|++|++++|+|.+|++||+++|+++|+++| +|+|| |++++.+... +.. .+.+..++||+++|+|||
T Consensus 161 t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~--------~~~~~~d~~~~vDsis~s~HK~ 232 (380)
T PRK02769 161 PPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFV--------NNPPPFSFADGIDSIAISGHKF 232 (380)
T ss_pred cEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeeccc--------CccccCCccCCCCEEEECCccc
Confidence 999999999999999999999999999998 69999 8888776432 111 111222599999999999
Q ss_pred CCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC-cchHHHHHHHHhcChhhHHHHHHHHHH
Q psy1785 443 LTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK-PDVLKFWFMWKAKGTDGLEAHIDKSFD 521 (629)
Q Consensus 443 l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~w~~l~~~G~~G~~~~~~~~~~ 521 (629)
+++|++||++++|++ .+.. +...++|+.. .+.++++||+ +.++++|.+|+.+|.+|++++++++++
T Consensus 233 ~~~P~g~G~l~~r~~-~~~~-~~~~~~yl~~-----------~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~ 299 (380)
T PRK02769 233 IGSPMPCGIVLAKKK-YVER-ISVDVDYIGS-----------RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLD 299 (380)
T ss_pred CCCCCCcEEEEEehh-hhhh-cccCccccCC-----------CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 999999999999985 3333 3345677643 2357889997 479999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceE
Q psy1785 522 NAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFF 601 (629)
Q Consensus 522 la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~l 601 (629)
+++||.++|++. |++++. +|.+++|||+.+. ..+ . +|+-+ +.. .+.+
T Consensus 300 la~~l~~~L~~~-g~~~~~-~p~~~~v~f~~~~--------------------~~~----~-~~w~l-~~~-----~~~~ 346 (380)
T PRK02769 300 MAQYAVDRLQAN-GIPAWR-NPNSITVVFPCPS--------------------ERI----W-KKWHL-ATS-----GNQA 346 (380)
T ss_pred HHHHHHHHHHhC-CCEEEc-CCCceEEEEcCCC--------------------HHH----H-hCeeE-ccc-----CCEE
Confidence 999999999885 999998 8999999997421 011 1 45432 211 1479
Q ss_pred EEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 602 RLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 602 R~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
|+++| +++|++.||.|++.|....
T Consensus 347 hi~~~-~~~~~~~~~~f~~dl~~~~ 370 (380)
T PRK02769 347 HIITM-PHHNKQQIDSLIDELIFDL 370 (380)
T ss_pred EEEEC-CCCCHHHHHHHHHHHHHHH
Confidence 99999 9999999999999987653
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=5.5e-38 Score=333.70 Aligned_cols=339 Identities=35% Similarity=0.564 Sum_probs=283.7
Q ss_pred cccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHh
Q psy1785 220 FVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHH 297 (629)
Q Consensus 220 ~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~ 297 (629)
|++++++++++.++++++++..+|++...|..+|....+|+++.+|+++++|++ ..+++||+|||++|+.++.+++.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~ 80 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDR 80 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHH
Confidence 567888889999999999999999998889999999999999999999999996 368999999999999999999876
Q ss_pred hchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeC
Q psy1785 298 AFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSG 377 (629)
Q Consensus 298 ~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~G 377 (629)
..++.+..|....++.+|+++..+|+++.+++..+|. +++.||+++++.+|+++|+++|.+..+++..+.+|+++.+
T Consensus 81 ~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~ 157 (345)
T cd06450 81 ARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAG 157 (345)
T ss_pred hhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecc
Confidence 5544443332222356899999999999999999998 9999999999999999999999887777777888999999
Q ss_pred CCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccc--cccCCcceEEEeCCCCCCCCCCccEEEE
Q psy1785 378 TTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRN--YVIEVVADSVTWNPHKLLTAPQQCSVFL 453 (629)
Q Consensus 378 tt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~--~~i~~gaDsv~~~~HK~l~~P~~~g~ll 453 (629)
++.+|.++|+++|+++|+++|+|+|+ |++.+.+... .... .++.. +|++++++|||+++|.+||+++
T Consensus 158 ~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~--------~~~~~~~~~~~-~d~~~~s~~K~l~~p~g~g~~~ 228 (345)
T cd06450 158 TTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFP--------EPRHLDFGIER-VDSISVDPHKYGLVPLGCSAVL 228 (345)
T ss_pred cCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhCh--------hhHHHhcCccc-cCEEEEchhHhhCCCcchHHHH
Confidence 99999999999999999999999999 7777665332 1111 12345 9999999999999999999887
Q ss_pred EeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC
Q psy1785 454 TRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR 533 (629)
Q Consensus 454 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~ 533 (629)
++ ++++|.+++.+|.+|+++++++..++++++.+.|+++
T Consensus 229 ~~-----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 267 (345)
T cd06450 229 VR-----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRAD 267 (345)
T ss_pred HH-----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 65 5888999999999999999999999999999999999
Q ss_pred CCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHH
Q psy1785 534 PGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHS 613 (629)
Q Consensus 534 ~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~e 613 (629)
++++++. ++..++++|++.+.. + .+..+.++.++|.++|.+++......+ ..++|++++++.+|++
T Consensus 268 ~~~~~~~-~~~~~iv~f~~~~~~-~-----------~~~~~~~i~~~L~~~g~~~~~~~~~~~-~~~lRis~~~~~~t~~ 333 (345)
T cd06450 268 PGFELLG-EPNLSLVCFRLKPSV-K-----------LDELNYDLSDRLNERGGWHVPATTLGG-PNVLRFVVTNPLTTRD 333 (345)
T ss_pred CCeEEec-CCceeEEEEEECCcc-h-----------hhHHHHHHHHHHHhcCCEEEEeeEECC-eEEEEEEecCCCCCHH
Confidence 9999887 788999999975421 0 011124678889888766666544433 3589999986678999
Q ss_pred HHHHHHHHHHHH
Q psy1785 614 DMDYFIDEIERL 625 (629)
Q Consensus 614 did~l~~~i~~l 625 (629)
|||+++++|+++
T Consensus 334 di~~l~~~l~~~ 345 (345)
T cd06450 334 DADALLEDIERA 345 (345)
T ss_pred HHHHHHHHHHhC
Confidence 999999999763
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=5.4e-30 Score=275.12 Aligned_cols=364 Identities=20% Similarity=0.325 Sum_probs=272.2
Q ss_pred CCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCC
Q psy1785 196 SSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGG 275 (629)
Q Consensus 196 ~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~ 275 (629)
.++++|++.++++...+.... ++++...+.+.+... +.+..++..+.......+....++.++.+++++++|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~ 77 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLKYE--RILSSMCTEPHPIAR--KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDA 77 (371)
T ss_pred CCHHHHHHHHHHHHhcCCCHH--HeeeeeecCchHHHH--HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence 468899999999987776655 467776666655432 3454444433322222356778889999999999999887
Q ss_pred CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHH
Q psy1785 276 DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESL 355 (629)
Q Consensus 276 ~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~L 355 (629)
.+++++|||++|..++.+++.... .++..|+++...|+++.++++..|+ +++.||+++++.+|+++|
T Consensus 78 ~~~~~~ggt~a~~~a~~~~~~~~~----------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~~~~~d~~~l 144 (371)
T PRK13520 78 YGYITSGGTEANIQAVRAARNLAK----------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDDDYRVDVKAV 144 (371)
T ss_pred CeEEecCcHHHHHHHHHHHHhhcc----------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCCCCcCCHHHH
Confidence 899999999999999888765310 1344688899999999999999998 999999999999999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccccccccccccc--ccCCc
Q psy1785 356 RGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNY--VIEVV 431 (629)
Q Consensus 356 e~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~--~i~~g 431 (629)
+++|.+ .+..|+.+.++|.+|.++|+++|.++|+++|+++|| +++++...... ....+ ... +
T Consensus 145 ~~~i~~------~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~-------~~~~~~~~~~-~ 210 (371)
T PRK13520 145 EDLIDD------NTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLD-------DPPNFDFSLP-G 210 (371)
T ss_pred HHHHhh------CCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhc-------CCCCccccCC-C
Confidence 999975 255677888999999999999999999999999999 77765431110 00001 123 4
Q ss_pred ceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-chHHHHHHHHhcChh
Q psy1785 432 ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTD 510 (629)
Q Consensus 432 aDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~ 510 (629)
+|++++++|||+++|.++|+++++++..+... ....+|+.... .....++|.. .++.+|.+++.++.+
T Consensus 211 vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l-~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~~~ 279 (371)
T PRK13520 211 VDSITIDPHKMGLAPIPAGGILFRDESYLDAL-AVDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLGRE 279 (371)
T ss_pred CceEEECCccccCccCCceEEEEcCHHHHHhh-cccCccccCCC----------CcceEeeccChHHHHHHHHHhhhcHh
Confidence 99999999999999999999999886555432 22334443221 1122345543 578899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEe
Q psy1785 511 GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMIT 590 (629)
Q Consensus 511 G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~ 590 (629)
|+++++++..+++++|.+.|+++ |++++. .|..++++|.+.+ ..++.++|.++|.. +.
T Consensus 280 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~v~~~~~~-------------------~~~v~~~L~~~gi~-v~ 337 (371)
T PRK13520 280 GYRKVVERCMENTRWLAEELKER-GFEPVI-EPVLNIVAFDDPN-------------------PDEVREKLRERGWR-VS 337 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCEEec-CCCceEEEEecCC-------------------HHHHHHHHHHCCce-ec
Confidence 99999999999999999999998 998665 5677788886531 12567778888854 33
Q ss_pred eeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 591 YQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 591 ~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.. . .++++|++++ +.+|++||+++++.|+++.+
T Consensus 338 ~~--~-~~~~iRis~~-~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 338 VT--R-CPEALRIVCM-PHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred cC--C-CCCEEEEEEE-CCCCHHHHHHHHHHHHHHhh
Confidence 21 1 2358999996 89999999999999988754
No 15
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.97 E-value=8.1e-30 Score=292.35 Aligned_cols=382 Identities=15% Similarity=0.134 Sum_probs=269.6
Q ss_pred CHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHh----cCCCccccc-cChhHHHHHHHHHHHHHHHhC
Q psy1785 197 SHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADA----LNPSVYTYE-VSPVFSLMEEHVLAQMRTIVG 271 (629)
Q Consensus 197 ~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~----~n~~~~~~~-~~p~~~~~E~~~~~~l~~l~G 271 (629)
+|.+++++++++...+....+ .|.+. .+=...++.+.+++... .+-.+++.+ .+++..+++.+..+|+++++|
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~-~fi~l-Gsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltG 544 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNN-SMIPL-GSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITG 544 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccc-cCCCC-ccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHC
Confidence 899999999999877754333 22220 01112233344444322 223356665 788899999999999999999
Q ss_pred CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCC
Q psy1785 272 FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRML 351 (629)
Q Consensus 272 ~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d 351 (629)
++. .+....+|+.+++++++++|... +.+.+ ..+.+|+++.++|.+..+++...|+ +|+.||+|++|.+|
T Consensus 545 md~-~Sl~p~aGA~gE~agL~aiR~y~--~~rge----~~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d~~G~iD 614 (939)
T TIGR00461 545 FDA-ISLQPNSGAQGEYAGLRVIRSYH--ESRGE----NHRNICLIPVSAHGTNPASAAMAGM---QVVPVNCDQDGNID 614 (939)
T ss_pred CCC-cccCCchHHHHHHHHHHHHHHHH--HhcCC----CCCCEEEEEccccCcCHHHHHHCCC---EEEEeccCCCCCcC
Confidence 994 55666677888888998888643 22222 2467899999999999999999999 99999999999999
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC-HHHHHHHHHHcCCeEEE--ec-Cccccccccccccccccccccc
Q psy1785 352 PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP-IPAIADICAEYDMADSV--TW-NPHKLLTAPQQCSVFLTRRNYV 427 (629)
Q Consensus 352 ~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp-l~ei~~i~~~~~~~lhV--A~-gg~~l~~~~~~~~~~l~~~~~~ 427 (629)
+++|+++|++ .+..+.+|++++++| .|.++| |++|+++||++|.|++| |. +++..+..|
T Consensus 615 le~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~P------------- 677 (939)
T TIGR00461 615 LVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSP------------- 677 (939)
T ss_pred HHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCc-------------
Confidence 9999999975 344688999999998 699977 99999999999999999 33 222222221
Q ss_pred cCCcceEEEeCCCCCCCCCCcc-----EEEEEeccchhhhhhcCCCCccccCCcCCCc-ccCCCCccCCCCCCc-chHHH
Q psy1785 428 IEVVADSVTWNPHKLLTAPQQC-----SVFLTRHQSVLTECHSASASYLFQKDKFYDT-KYDSGDKHIQCGRKP-DVLKF 500 (629)
Q Consensus 428 i~~gaDsv~~~~HK~l~~P~~~-----g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~-~~~~~~~~~~~sr~~-~al~~ 500 (629)
-+.|||++++|.||+++.|.++ |++++|+. +...+ +..+.......++ ..+.+..+--|.+.+ .+++.
T Consensus 678 g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~l---Pg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a 752 (939)
T TIGR00461 678 GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFL---PKHDVVSMITGIGGSKSIGSVSAAPYGSASILPIS 752 (939)
T ss_pred cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhc---CCCcccccccCCCCccccccccccccCcHHHHHHH
Confidence 1347999999999999977776 99999974 32221 1111111000000 001111111133333 46999
Q ss_pred HHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC---CCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHH
Q psy1785 501 WFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE---PECTNISFWYIPPSLRGKEDQADFNELLHKVAPKI 577 (629)
Q Consensus 501 w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~---p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i 577 (629)
|++++.+|.+|+++..+.++.+|+|++++|.+ +++++.+. +.+..++|++.|.. +..+..+..|
T Consensus 753 ~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~-----------~~~g~~~~dI 819 (939)
T TIGR00461 753 WMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK-----------AKTGIEAIDV 819 (939)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh-----------hhcCCCHHHH
Confidence 99999999999999999999999999999987 67877621 56788999986521 1122234578
Q ss_pred HHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 578 KERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 578 ~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.++|++.|....+.. +... ..+-++++ +.++++|||++++++.++.++
T Consensus 820 akrL~d~G~hapt~~-~pv~-g~lmiepT-E~eskeelD~f~~al~~I~~e 867 (939)
T TIGR00461 820 AKRLQDYGFHAPTLS-FPVP-GTLMVEPT-ESESLEELDRFCDAMIAIKEE 867 (939)
T ss_pred HHHHHhCCeeccccC-CccC-CeEEEEee-ccCCHHHHHHHHHHHHHHHHH
Confidence 999999996543322 2222 25777787 899999999999999888764
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.97 E-value=8.9e-29 Score=265.96 Aligned_cols=369 Identities=19% Similarity=0.298 Sum_probs=269.4
Q ss_pred CHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCC
Q psy1785 197 SHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGD 276 (629)
Q Consensus 197 ~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~ 276 (629)
+++++++.+.++...+++.++++++..+.+.+.+....+ +..++..+.......|....++.++.+++++++|++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a--~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~ 78 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRILGSMCTNPHPIAVKA--YDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDAY 78 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcEEEEEeCCchHHHHHH--HHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCC
Confidence 478899999999888888888887777766666553322 333333222222234566788899999999999998888
Q ss_pred eEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHH
Q psy1785 277 GIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLR 356 (629)
Q Consensus 277 g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le 356 (629)
+++++|+|++++.++.+.+.... .+ .+...|+++..+|+++.++++..|+ +++.+++++++.+|+++|+
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~-----~~---~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~~~~~d~~~l~ 147 (373)
T TIGR03812 79 GYIVSGGTEANIQAVRAAKNLAR-----EE---KRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDEDYTVDVKDVE 147 (373)
T ss_pred eEEeccHHHHHHHHHHHHHHHHh-----cc---CCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCCCCCcCHHHHH
Confidence 99999999999888766553210 00 1334678899999999999999999 9999999999999999999
Q ss_pred HHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccccccccccccccc-CCcce
Q psy1785 357 GEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVI-EVVAD 433 (629)
Q Consensus 357 ~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i-~~gaD 433 (629)
+++.+. +..|+.+.++|.+|.++|+++|.++|+++|+|+|| |++++......... ......+ ..|+|
T Consensus 148 ~~l~~~------~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~----~~~~~d~~~~~~d 217 (373)
T TIGR03812 148 DLIDDN------TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGY----NPPPFDFSLPGVQ 217 (373)
T ss_pred HHHhhC------cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCC----CCCCccccCCCCC
Confidence 988652 34455566889999999999999999999999999 77755431110000 0001101 12599
Q ss_pred EEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-chHHHHHHHHhcChhhH
Q psy1785 434 SVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGL 512 (629)
Q Consensus 434 sv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~ 512 (629)
++++++|||+.+|.++|.+++++++.+... ....+|+.... .....++|.. .++.+|.+++.++.+|+
T Consensus 218 ~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l-~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~l~~~g~ 286 (373)
T TIGR03812 218 SITIDPHKMGLSPIPAGGILFRSKSYLKYL-SVDAPYLTVKK----------QATITGTRSGASAAATYAVIKYLGREGY 286 (373)
T ss_pred EEEECccccCCCcCCceEEEEeCHHHHhhh-cccCcccCCCC----------CcceEeechhHHHHHHHHHHHHhCHHHH
Confidence 999999999999999998888776655432 22334543221 1123356653 67888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeee
Q psy1785 513 EAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQ 592 (629)
Q Consensus 513 ~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~ 592 (629)
+++.++..+++++|++.|+++ +++.+. +|..+.|+|+..+. ..+.++|.++|.+ +...
T Consensus 287 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~v~~~~~~~-------------------~~v~~~L~~~gi~-v~~~ 344 (373)
T TIGR03812 287 RKIVAECMENTRYLVEELKKI-GFEPVI-EPVLNIVAFEVDDP-------------------EEVRKKLRDRGWY-VSVT 344 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCeEEc-CCCceEEEEEeCCH-------------------HHHHHHHHHCCce-eccC
Confidence 999999999999999999998 776665 57788888875310 2567788888854 3322
Q ss_pred ecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 593 PIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 593 ~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
. + ++++|++++ ..+|++|||++++.|+++
T Consensus 345 ~--~-~~~iRis~~-~~~t~edid~l~~~L~~~ 373 (373)
T TIGR03812 345 R--C-PKALRIVVM-PHVTREHIEEFLEDLKEI 373 (373)
T ss_pred C--C-CCEEEEEEE-CCCCHHHHHHHHHHHhhC
Confidence 1 2 358999997 889999999999999864
No 17
>KOG1383|consensus
Probab=99.97 E-value=1.3e-28 Score=255.18 Aligned_cols=386 Identities=15% Similarity=0.169 Sum_probs=292.5
Q ss_pred cCCCCCCCCHHHHHHHHHHHhcccccCCCCccccccCC-CCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHH
Q psy1785 189 LGFNAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFS-SVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMR 267 (629)
Q Consensus 189 ~~lp~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s-~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~ 267 (629)
..+|+.+.+-+++++.+.+.....-.+.-.+..+.++. ......+..+.+..+ |.......|+...+|.+++++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm~~ 130 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNMIA 130 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHHhhc---CccCccccchhHHHHHHHHHHHH
Confidence 57999999999999999887766544432333332222 334444444444433 56666788999999999999999
Q ss_pred HHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecC-
Q psy1785 268 TIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTD- 345 (629)
Q Consensus 268 ~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d- 345 (629)
.|++-+. ..|..|.|||++.+.+....+.++.. +.|+ ....+++....|.++.|+++..++ +++.||++
T Consensus 131 ~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~---~k~I---~~p~iv~~~~v~~a~eK~a~yf~v---~l~~V~~~~ 201 (491)
T KOG1383|consen 131 NLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKA---QKGI---DKPNIVTPQNVHAAFEKAARYFEV---ELREVPLDE 201 (491)
T ss_pred HHhcCCccccCccccccchHHHHHHHHHHHHHHh---ccCC---CCccccchHHHHHHHHHHHhhEEE---EEEeeeccc
Confidence 9998876 67899999999977777766655321 1454 344577899999999999999999 99999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH-cCCeEEE--ecCcccccccccccccccc
Q psy1785 346 ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE-YDMADSV--TWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 346 ~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~-~~~~lhV--A~gg~~l~~~~~~~~~~l~ 422 (629)
.+.++|+..+.+.+++ ++.+|++.++++.+|.+||++++.++..+ +++++|| +.|++....--+.. .
T Consensus 202 ~~~~~D~~k~~~~i~e------Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~----~ 271 (491)
T KOG1383|consen 202 GDYRVDPGKVVRMIDE------NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE----E 271 (491)
T ss_pred cceEecHHHHHHHhcc------ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc----c
Confidence 5789999999999987 68899999999999999999999999988 9999999 66666543110000 0
Q ss_pred ccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-chHHHH
Q psy1785 423 RRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFW 501 (629)
Q Consensus 423 ~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~w 501 (629)
.=+++..+ +-|++.|+||++.+|.|.|.++.|+++++...+.....|+.+ .+...|+.+||.. .+...|
T Consensus 272 ~fdFr~p~-V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg---------~y~s~TlngSR~g~~va~~w 341 (491)
T KOG1383|consen 272 EFDFRVPG-VTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGG---------IYASPTLNGSRPGSQVAAQW 341 (491)
T ss_pred ccccCCCC-ceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCc---------cccCcccccCCcccHHHHHH
Confidence 01124455 999999999999999999999999998876544444555432 2556788999996 578899
Q ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHH
Q psy1785 502 FMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERM 581 (629)
Q Consensus 502 ~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l 581 (629)
++|..+|.+||.+..+++++.+++|++.|++++++.++. +|....+.|.-. . ++. .++.+.|
T Consensus 342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~g-kp~vs~~~~~s~-----------~----~~i--~elsd~l 403 (491)
T KOG1383|consen 342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVG-KPLVSFILFGSN-----------D----VNI--FELSDLL 403 (491)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecC-CCcEEEEEccCC-----------c----cch--hhhhHHH
Confidence 999999999999999999999999999999999999998 777666655311 1 111 3677899
Q ss_pred HhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 582 MKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 582 ~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.|+.+-.++.. ..+.+|++--.+.++-.|+|+..|+++.++
T Consensus 404 ~~~GW~lnalq~P----~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~e 446 (491)
T KOG1383|consen 404 RKKGWILNALQFP----AAIHICVTRVHAREDVADRFVADIRKVVEE 446 (491)
T ss_pred HhcCcCccccCCC----CceEEEEEeeeccHHHHHHHHHHHHHHHHH
Confidence 9999987666543 357778763333344367788888777654
No 18
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.96 E-value=3.8e-27 Score=275.09 Aligned_cols=375 Identities=14% Similarity=0.156 Sum_probs=262.9
Q ss_pred CCHHHHHHHHHHHhcccccCC-CCccccccCCCCChHHHHHHHHHHh----cCCCcccc-ccChhHHHHHHHHHHHHHHH
Q psy1785 196 SSHAKLIDLMKTVIQYSVKTG-HPYFVNQLFSSVDPYGLVGQWLADA----LNPSVYTY-EVSPVFSLMEEHVLAQMRTI 269 (629)
Q Consensus 196 ~~~~~il~~l~~~~~~~~~~~-~p~~~g~~~s~~~~~~~~~~~lt~~----~n~~~~~~-~~~p~~~~~E~~~~~~l~~l 269 (629)
.+|.+++++++++...+.... +..+.|..+.-..+ .+++.... .+-.+++. +.+++..+++.++++|++++
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGsct~~~~p---~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGSCTMKLNA---AAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCcCCCcCCH---HHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 499999999999988776533 33456653333332 22222222 22235555 67888999999999999999
Q ss_pred hCCCCCCeEEeC-CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCC
Q psy1785 270 VGFQGGDGIFCP-GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARG 348 (629)
Q Consensus 270 ~G~~~~~g~~~~-GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g 348 (629)
+|++ .+.+++ ||+.+++.+++++|... .+.|- ..+.+|+++..+|+|+.+++..+|+ +|+.||+|.+|
T Consensus 555 tG~d--~~sl~~~~ga~ge~agL~a~r~~~----~~~G~--~~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~d~~G 623 (954)
T PRK05367 555 TGYD--AVSLQPNAGAQGEYAGLLAIRAYH----ESRGE--GHRDVCLIPSSAHGTNPASAVMAGM---KVVVVACDENG 623 (954)
T ss_pred HCCC--CEEECccHHHHHHHHHHHHHHHHh----hccCC--CCCCEEEEEchhhhhhHHHHHHCCC---EEEEECCCCCC
Confidence 9998 366666 66688888887776531 12232 2356789999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc-ccccccccccccccccc
Q psy1785 349 RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH-KLLTAPQQCSVFLTRRN 425 (629)
Q Consensus 349 ~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~-~l~~~~~~~~~~l~~~~ 425 (629)
.+|+++|+++|.+. ...++.|++++++|..+..|||++|+++||++|+|+|| |..+. ..+..|
T Consensus 624 ~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p----------- 689 (954)
T PRK05367 624 NIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP----------- 689 (954)
T ss_pred CcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh-----------
Confidence 99999999988642 23578889999888844459999999999999999999 55332 222221
Q ss_pred cccCCcceEEEeCCCCCCCCCCccE-----EEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc----c
Q psy1785 426 YVIEVVADSVTWNPHKLLTAPQQCS-----VFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP----D 496 (629)
Q Consensus 426 ~~i~~gaDsv~~~~HK~l~~P~~~g-----~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~----~ 496 (629)
.+.|||++++|+|||+++|.|+| ++++|+. +. +|+.......+ .+....+..++.+. .
T Consensus 690 --g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~-------p~lpg~~v~~~--~~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 690 --GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA-------PFLPGHPVQIA--GGETGIGAVSAAPFGSASI 756 (954)
T ss_pred --hhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc-------ccCCCCccCcC--CCCCCcCcchhHHHHHHHH
Confidence 13479999999999999998855 8999852 22 22322110000 00001122233332 4
Q ss_pred hHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc---CCCceEEEEEeeCCCC-CCCCchhhHHHHHhh
Q psy1785 497 VLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD---EPECTNISFWYIPPSL-RGKEDQADFNELLHK 572 (629)
Q Consensus 497 al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~---~p~~~~v~F~~~p~~~-~~~~~~~~~~~~l~~ 572 (629)
+++.|++++.+|.+|++++.++++.+|+|++++|++. +++... .+....++|.+.+... .+.
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~~~g~------------ 822 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKESTGI------------ 822 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccccCCC------------
Confidence 6679999999999999999999999999999999874 555431 1446677777753211 011
Q ss_pred HHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
-+..+.++|.+.|....+ ..+.. .+.+|++++ ..++++|||+|+++|+.+.++
T Consensus 823 ~~~di~krL~d~G~~~~t-~~~pv-~~~l~i~pt-E~~s~~elDr~~~al~~i~~e 875 (954)
T PRK05367 823 TVDDIAKRLIDYGFHAPT-MSFPV-AGTLMVEPT-ESESKAELDRFCDAMIAIRAE 875 (954)
T ss_pred CHHHHHHHHHHCCCeEee-cCCcc-CCEEEEEee-ecCCHHHHHHHHHHHHHHHHH
Confidence 124678899999965433 12333 357999997 999999999999999888654
No 19
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=1.7e-26 Score=248.51 Aligned_cols=351 Identities=16% Similarity=0.166 Sum_probs=254.9
Q ss_pred ccccccCCCCChHHHHHHHHHHh---cCCCc--cccccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHH
Q psy1785 219 YFVNQLFSSVDPYGLVGQWLADA---LNPSV--YTYEVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAIS 292 (629)
Q Consensus 219 ~~~g~~~s~~~~~~~~~~~lt~~---~n~~~--~~~~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~ 292 (629)
.|+.+..++.-+..+ .+.+..+ +|.|. ..+..+...+..+.++++.+++++|.++ .+.+||+|.|++......
T Consensus 24 vylD~aa~~~~p~~V-~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~ 102 (405)
T COG0520 24 VYLDNAATSQKPQAV-LDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVAR 102 (405)
T ss_pred EEecCcccccCCHHH-HHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHH
Confidence 455555554433333 3334332 23333 3455667778889999999999999995 889999999998665554
Q ss_pred HHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCC
Q psy1785 293 CARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAV 368 (629)
Q Consensus 293 ~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~ 368 (629)
..... . .+...|++|...|.| |...++..|+ +|+.||++++|.+|.++++..|.+ .
T Consensus 103 ~l~~~-----~------~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~~g~~~~~~~~~~i~~------~ 162 (405)
T COG0520 103 GLGRS-----L------KPGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDDDGLLDLDALEKLITP------K 162 (405)
T ss_pred Hhhhh-----h------cCCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCCCCCcCHHHHHHhcCC------C
Confidence 33221 1 244678899999997 5667777788 999999999999999999996655 5
Q ss_pred cEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC
Q psy1785 369 PFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP 446 (629)
Q Consensus 369 ~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P 446 (629)
+.+|..++.++.+|.+.|+++|+++||++|+|+.| +.+...+..+ .+ +.|+|.+++++|||+++|
T Consensus 163 Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~id---------v~----~l~~Df~afsgHKwl~gP 229 (405)
T COG0520 163 TKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPID---------VQ----ELGCDFLAFSGHKWLLGP 229 (405)
T ss_pred ceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCC---------ch----hcCCCEEEEcccccccCC
Confidence 77999999999999999999999999999999999 4444333322 22 237999999999999999
Q ss_pred CccEEEEEeccchhhhhhcCCCCccccCCc-CC-----CcccCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHH
Q psy1785 447 QQCSVFLTRHQSVLTECHSASASYLFQKDK-FY-----DTKYDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDK 518 (629)
Q Consensus 447 ~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~-~~-----~~~~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~ 518 (629)
.|+|++++|++ .+... .++..+... .+ ...+....+.++++... .++.+-.+++.+...|++++.++
T Consensus 230 ~GiGvLy~r~~-~l~~l----~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~ 304 (405)
T COG0520 230 TGIGVLYVRKE-LLEEL----EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAH 304 (405)
T ss_pred CceEEEEEchH-HHhhc----CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHH
Confidence 99999999985 44332 223322211 10 11122233344555553 56777788888889999999999
Q ss_pred HHHHHHHHHHHHhcCCCcEEEccC--CCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeec--
Q psy1785 519 SFDNAKYFTDKIRHRPGFKLVLDE--PECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPI-- 594 (629)
Q Consensus 519 ~~~la~~l~~~L~~~~g~~l~~~~--p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~-- 594 (629)
..++++|+.++|+++|+++++.++ ...++++|.+.... ...+...|.++| +++.....
T Consensus 305 e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~-----------------~~dv~~~L~~~g-I~vr~g~~ca 366 (405)
T COG0520 305 ERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH-----------------PHDVATLLDEKG-IAVRAGHHCA 366 (405)
T ss_pred HHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC-----------------HHHHHHHHHhCC-eEEEeccccc
Confidence 999999999999999999999832 36899999875321 135677888888 43331111
Q ss_pred ------CCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 595 ------HALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 595 ------~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+....+|+|+. .++|++|||+|+++|+++.+
T Consensus 367 ~p~~~~~~~~~~iR~S~~-~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 367 QPLHRLLGVDATIRASLH-LYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred cHHHHhcCCCCceEEEEe-ecCCHHHHHHHHHHHHHHhh
Confidence 122234999996 99999999999999998753
No 20
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.96 E-value=1.1e-26 Score=257.33 Aligned_cols=397 Identities=18% Similarity=0.164 Sum_probs=260.2
Q ss_pred CHHHHHHhhccCCCCCCCCHHHHHHHHHHHhcccccCCCCccccccCCC-CChHHHHHHHHHH--hcCCCccccc-cChh
Q psy1785 179 NPEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSS-VDPYGLVGQWLAD--ALNPSVYTYE-VSPV 254 (629)
Q Consensus 179 ~~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~-~~~~~~~~~~lt~--~~n~~~~~~~-~~p~ 254 (629)
.|+.++..-.+.+|+ .+|.+++++++++...+....+ .|.|.-... ..+..+....+.+ ..|.+.++.+ .++.
T Consensus 34 ip~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~~-~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG 110 (481)
T PRK04366 34 LPEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVDT-GFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQG 110 (481)
T ss_pred CCHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCCc-ceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhH
Confidence 455555433456776 8999999999999877654322 455543222 2223334334433 2344566555 7888
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC
Q psy1785 255 FSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL 334 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl 334 (629)
..++..++.+++++++|++. ..++..+|+.+.+.++..++.... ..|- .++..|+++...|.+...++...|+
T Consensus 111 ~lel~~~~~~~la~l~G~~~-~~l~~~~GA~a~~~~l~~~r~~~~----~~Gd--~~~~~Vlv~~~~hp~~~~~~~~~G~ 183 (481)
T PRK04366 111 ALELMYELQEWLKEITGMDA-VTLQPAAGAHGELTGLLMIRAYHE----ARGD--TKRTEVIVPDSAHGTNPASAAMAGF 183 (481)
T ss_pred HHHHHHHHHHHHHHHhCCCc-eEEEeCcHHHHHHHHHHHHHHHhh----ccCc--CCCCEEEEcCCccHhHHHHHHHcCC
Confidence 89999999999999999973 334445666666666555443211 1121 1234678888999999999999999
Q ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHcCCeEEE-ecCcccccc
Q psy1785 335 GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF-DPIPAIADICAEYDMADSV-TWNPHKLLT 412 (629)
Q Consensus 335 g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i-dpl~ei~~i~~~~~~~lhV-A~gg~~l~~ 412 (629)
+++.||++++|.+|+++|+++|.+ .+..|+++..+ .+|.+ +|+++|+++|+++|.|++| +-....++.
T Consensus 184 ---~vv~v~~~~~~~~D~e~L~~~i~~------~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g 253 (481)
T PRK04366 184 ---KVVEIPSNEDGLVDLEALKAAVGE------DTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILG 253 (481)
T ss_pred ---EEEEeecCCCCCcCHHHHHhhccc------CCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcc
Confidence 999999998899999999998864 24566677644 78988 6999999999999999998 322211111
Q ss_pred ccccccccccccccccCCcceEEEeCCCCCCCCCCcc-----EEEEEeccchhhhhhcCCCCccccCC-cCCCcccCCCC
Q psy1785 413 APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQC-----SVFLTRHQSVLTECHSASASYLFQKD-KFYDTKYDSGD 486 (629)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~-----g~ll~r~~~~l~~~~~~~~~yl~~~~-~~~~~~~~~~~ 486 (629)
. . .. -+.|||++++++||||++|.++ |++++|++ +.+.. +..+...+ ..+.-.++ ..
T Consensus 254 ~-~------~~----~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~~~l----p~~~v~~~g~~~~l~~~-r~ 316 (481)
T PRK04366 254 K-A------RP----GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LAPFL----PVPVVEKDGDRYRLDYD-RP 316 (481)
T ss_pred c-C------Cc----cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hHhhC----CCCeeeccCCceeeccc-cc
Confidence 0 0 11 1347999999999999999876 48888874 33221 11111111 01111111 11
Q ss_pred ccCCCCCCc-----chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCC
Q psy1785 487 KHIQCGRKP-----DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKE 561 (629)
Q Consensus 487 ~~~~~sr~~-----~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~ 561 (629)
.++...+.+ .++++|.++..+|.+|++++.++++++++||+++|+++ +++..+.+.+..++|....-...+.
T Consensus 317 ~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~- 393 (481)
T PRK04366 317 KSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGV- 393 (481)
T ss_pred ccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCC-
Confidence 122222222 36899999999999999999999999999999999987 5544423555555554311011111
Q ss_pred chhhHHHHHhhHHHHHHHHHHhcCcEEEe-eeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 562 DQADFNELLHKVAPKIKERMMKSGSMMIT-YQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 562 ~~~~~~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
-+.++.++|.++|..... +.+. ...+.+|++++ ..+|++|||.|+++|+++.++
T Consensus 394 -----------~~~~v~~~L~~~Gi~~~~~~~p~-~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~ 448 (481)
T PRK04366 394 -----------RTLDIAKRLLDYGFHPPTIYFPL-IVPEALMIEPT-ETESKETLDAFIAAMKQIAEE 448 (481)
T ss_pred -----------CHHHHHHHHHHCCccCCcccccc-ccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHH
Confidence 124678889999964221 1111 11347999996 999999999999999988654
No 21
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=1.3e-26 Score=241.13 Aligned_cols=316 Identities=18% Similarity=0.211 Sum_probs=226.6
Q ss_pred cCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCc
Q psy1785 242 LNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDA 321 (629)
Q Consensus 242 ~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~ 321 (629)
.|++. .+..+.....+-+++.+++++++|.++.+.+||+|||++|.+++..+..... ++ ...-.|++|...
T Consensus 30 gNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~----~~----~~~~HIIts~iE 100 (386)
T COG1104 30 GNPSS-LHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYR----NA----QKGKHIITSAIE 100 (386)
T ss_pred CCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhh----cc----cCCCeEEEcccc
Confidence 45544 3444556667778889999999999999999999999999999997544311 00 012368999999
Q ss_pred chHHHHHHHHc---CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcC
Q psy1785 322 HYSIKKLAAFE---GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYD 398 (629)
Q Consensus 322 H~Si~kaa~~l---Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~ 398 (629)
|.|+.++++.+ |+ +|.++|+|.+|.+|+++|+++|.+ .+.+|...+.++.+|.+.||++|+++|++++
T Consensus 101 H~aVl~~~~~Le~~g~---~Vtyl~V~~~G~v~~e~L~~al~~------~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~ 171 (386)
T COG1104 101 HPAVLNTCRYLERQGF---EVTYLPVDSNGLVDLEQLEEALRP------DTILVSIMHANNETGTIQPIAEIGEICKERG 171 (386)
T ss_pred cHHHHHHHHHHHhcCC---eEEEeCCCCCCeEcHHHHHHhcCC------CceEEEEEecccCeeecccHHHHHHHHHHcC
Confidence 99999999999 88 999999999999999999999986 3779999999999999999999999999999
Q ss_pred CeEEE-e-cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 399 MADSV-T-WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 399 ~~lhV-A-~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
+++|| | -..+++..+ .. +.++|.+++++||+.| |.|+|++|+|+.-.+. +.+.+..+
T Consensus 172 i~fHvDAvQa~Gkipi~---------~~----~~~vD~ls~SaHK~~G-pkGiGaLyv~~~~~~~-------p~i~GGgQ 230 (386)
T COG1104 172 ILFHVDAVQAVGKIPID---------LE----ELGVDLLSFSAHKFGG-PKGIGALYVRPGVRLE-------PLIHGGGQ 230 (386)
T ss_pred CeEEEehhhhcCceecc---------cc----ccCcceEEeehhhccC-CCceEEEEECCCCccC-------ceeccCcC
Confidence 99999 3 333344332 11 2259999999999865 9999999997643221 23332221
Q ss_pred CCCcccCCCCccCCCCCCc------chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC-CCcEEEcc-CCCc-eE
Q psy1785 477 FYDTKYDSGDKHIQCGRKP------DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR-PGFKLVLD-EPEC-TN 547 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~------~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~-~g~~l~~~-~p~~-~~ 547 (629)
+.++|. .+..+-.+++. ..+.+.....+...+.++|.+.|.+. |++.+..+ ++.+ ++
T Consensus 231 -------------E~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~ 296 (386)
T COG1104 231 -------------ERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNI 296 (386)
T ss_pred -------------CCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCe
Confidence 344553 23333344443 36677888888999999999999976 88887653 2333 33
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcC------cEEEeeee-----cC--C-----ccceEEEeecCCC
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSG------SMMITYQP-----IH--A-----LPNFFRLVLQNSA 609 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G------~~~i~~~~-----~~--~-----~~~~lR~~~~n~~ 609 (629)
++|.+. +++++ .+.-.|...| ..|-+... +. | ....||++++ ..
T Consensus 297 ~~~~f~--gv~gE---------------~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g-~~ 358 (386)
T COG1104 297 LNFSFP--GVEGE---------------SLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLG-RF 358 (386)
T ss_pred EEEEeC--CCcHH---------------HHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcC-CC
Confidence 444442 22221 2333344444 33322110 00 1 1247999996 99
Q ss_pred CCHHHHHHHHHHHHHHhhc
Q psy1785 610 LDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 610 ~t~edid~l~~~i~~l~~~ 628 (629)
+|++|||++++.++++.+.
T Consensus 359 tt~eei~~~~~~l~~~i~~ 377 (386)
T COG1104 359 TTEEEIDAAAEALKEIIKR 377 (386)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 9999999999999987654
No 22
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=4.9e-26 Score=250.81 Aligned_cols=379 Identities=17% Similarity=0.195 Sum_probs=249.4
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHHHHHhcccc-cCCCCcccccc------CCCCChHHHHHHHHHHhcCCCccccccC
Q psy1785 180 PEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSV-KTGHPYFVNQL------FSSVDPYGLVGQWLADALNPSVYTYEVS 252 (629)
Q Consensus 180 ~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~-~~~~p~~~g~~------~s~~~~~~~~~~~lt~~~n~~~~~~~~~ 252 (629)
|+.++...+.++|+.+ +++++++.+.++...+. ...|+.++|.- +.....+...+++++. +|+ +..+.+
T Consensus 32 p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~--~~~~~~ 107 (447)
T PRK00451 32 PEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTP--YQPEIS 107 (447)
T ss_pred CHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCC--CCCccc
Confidence 6777777777899865 99999999988774432 23467676631 1111222222344444 333 223446
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH-
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF- 331 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~- 331 (629)
+...+.+.+...++++++|++..++.+++|||++.. ++..++.. .++..|+++...|.+..+++..
T Consensus 108 ~g~~~~~~e~~~~la~l~g~~~~~v~~~~g~t~~~~-~~~~a~~~------------~~g~~Vlv~~~~~~~~~~~~~~~ 174 (447)
T PRK00451 108 QGTLQAIFEYQTMICELTGMDVANASMYDGATALAE-AALMAVRI------------TKRKKVLVSGAVHPEYREVLKTY 174 (447)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcceEEecCcHHHHHH-HHHHHHHh------------cCCCEEEEeCccCHHHHHHHHHH
Confidence 777888888889999999999888999999998544 44444431 1334577889999998887765
Q ss_pred ---cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE---ec
Q psy1785 332 ---EGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV---TW 405 (629)
Q Consensus 332 ---lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV---A~ 405 (629)
.|+ +++.||++++ .+|+++|+++|.+ .+.+|+++.. |.+|.++|+++|+++|+++|+|++| +.
T Consensus 175 ~~~~G~---~~~~v~~~~~-~~d~~~l~~~i~~------~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~ 243 (447)
T PRK00451 175 LKGQGI---EVVEVPYEDG-VTDLEALEAAVDD------DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV 243 (447)
T ss_pred HHhCCc---EEEEecCCCC-CCCHHHHHHhcCC------CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH
Confidence 577 9999999988 9999999998853 2556777765 8899999999999999999999988 22
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCC-----CCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKL-----LTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~-----l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
....+..+ .+.|+|.++.++||| +++| ++|+++++++ +.... . ..+.........
T Consensus 244 ~~g~~~~~--------------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~-~~~~~-~---~~~~g~~~~~~~ 303 (447)
T PRK00451 244 SLGLLKPP--------------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKK-LVRQM-P---GRLVGETVDADG 303 (447)
T ss_pred HhccCCCc--------------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHH-HHhhC-C---CCEeeeecccCC
Confidence 11111101 133699999999997 5556 7888888763 33321 0 000000000000
Q ss_pred c--c--------CCCCc----cCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCc
Q psy1785 481 K--Y--------DSGDK----HIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPEC 545 (629)
Q Consensus 481 ~--~--------~~~~~----~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~ 545 (629)
. + +...+ ...|++.. .++..+.+++.++.+|++++.++..++++++.+.|+++++++++. .+.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~-~~~~ 382 (447)
T PRK00451 304 KRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFD-GPFF 382 (447)
T ss_pred CeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecC-CCeE
Confidence 0 0 00000 00111111 235566677788999999999999999999999999998998874 4555
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEE-Eeeee-cCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMM-ITYQP-IHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~-i~~~~-~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..+++++. .. ..++.++|.++|.+. +...+ ..+..+++|++++ ..+|++|||++++.|+
T Consensus 383 ~~~~v~~~-~~-----------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i~~l~~~L~ 443 (447)
T PRK00451 383 NEFVVRLP-KP-----------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDIDALVAALG 443 (447)
T ss_pred EEEEEecC-CC-----------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHHHHHHHHHH
Confidence 55556541 00 125677788887531 11111 1122358999996 8999999999999998
Q ss_pred HHh
Q psy1785 624 RLG 626 (629)
Q Consensus 624 ~l~ 626 (629)
++.
T Consensus 444 ~~~ 446 (447)
T PRK00451 444 EVL 446 (447)
T ss_pred HHh
Confidence 764
No 23
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.93 E-value=5.1e-25 Score=234.11 Aligned_cols=369 Identities=16% Similarity=0.195 Sum_probs=210.7
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHHHHHhcccccC----CCCccccccCCCCCh-HHHHHHHHHHhcCCCccccccChh
Q psy1785 180 PEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSVKT----GHPYFVNQLFSSVDP-YGLVGQWLADALNPSVYTYEVSPV 254 (629)
Q Consensus 180 ~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~~~----~~p~~~g~~~s~~~~-~~~~~~~lt~~~n~~~~~~~~~p~ 254 (629)
|++++..-+..+|+ +.+|.+++++++.+...+... +.+.|..++|+..+. +....+|+|+++ +++.|.+++
T Consensus 32 P~~i~~~~~~~lp~-~~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYt---PYQpEisQG 107 (429)
T PF02347_consen 32 PEEIRLKKPLNLPE-PLSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYT---PYQPEISQG 107 (429)
T ss_dssp -GGG-SS-----------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-S---TTSGGGBHH
T ss_pred CHhhcCCCCCCCCC-CCCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCC---CCCcHHHHH
Confidence 55554433466775 589999999999998776441 122333344444443 334455666665 788899999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH----H
Q psy1785 255 FSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA----A 330 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa----~ 330 (629)
..++-.+.+.++++|.|++..+..+.+++|.....++++.|... ..+-.|+.+...|+...... .
T Consensus 108 ~Lq~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~-----------~~~~~vlv~~~~hP~~~~v~~t~a~ 176 (429)
T PF02347_consen 108 RLQALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATK-----------RKRNKVLVPESLHPQTRAVLRTYAA 176 (429)
T ss_dssp HHHHHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHT-----------T---EEEEETTS-CHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcc-----------cCCcEEEEcCCcChhhHHHHHHhhh
Confidence 99999999999999999998888999999987766655555431 12346888999999876643 4
Q ss_pred HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccc
Q psy1785 331 FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKL 410 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l 410 (629)
..|+ +|+.++.++++..| +.....|+++ .++..|.++++.+|++++|++|..+.++.++..+
T Consensus 177 ~~g~---~iv~~~~~~~~~~d--------------~~~~a~v~vq-~Pn~~G~~ed~~~i~~~~h~~gal~~~~ad~~aL 238 (429)
T PF02347_consen 177 PLGI---EIVEVPLDEDGTTD--------------DDDTAAVMVQ-NPNTFGVFEDIKEIADIAHAAGALVIVGADPNAL 238 (429)
T ss_dssp HCCE---EEEEE-BBTTCSB---------------STTEEEEEEE-SS-TTSB--THHHHHHHHHHTT-EEEECGGCCGC
T ss_pred hCCe---EEEEecccccCCcc--------------ccCeEEEEee-cCCCCceEeeHHHHHHHHHHcCCEEEEecCHHHH
Confidence 5677 99999999888887 1234455554 5667799999999999999999988773333322
Q ss_pred ccccccccccccccccccCCcceEEEeCCCCCCCCCCc-----cEEEEEeccchhhhhhcCCCCccccCCcCCCccc---
Q psy1785 411 LTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-----CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY--- 482 (629)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-----~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~--- 482 (629)
..- +.. -+.|||+++.+ ||.+|.|.+ +|++.+|++ +.+. -|..+.+...+.++..
T Consensus 239 ~~l--------~~P---ge~GADI~vg~-~Q~fg~p~~~GGP~~G~~a~~~~-l~r~----lPGRiVG~t~D~~G~~~~~ 301 (429)
T PF02347_consen 239 GGL--------KSP---GEYGADIVVGE-HQTFGIPMGFGGPGAGFFAVRED-LVRQ----LPGRIVGQTKDADGKRAFV 301 (429)
T ss_dssp CTC----------G---GGGT-SEEEEC-CTTTT---CCC-S--EEEEE-GG-GGGG----S-S-EEEEEEBCCCSCCEE
T ss_pred hCc--------CCh---hhcCccEEeeC-CCCCcccCCCCCCCeeeEEEhhh-hhhh----CCCceecccccccccceee
Confidence 110 111 24589999666 889999876 678888874 2221 1333332211111110
Q ss_pred ---CCCCc--------cCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE
Q psy1785 483 ---DSGDK--------HIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF 550 (629)
Q Consensus 483 ---~~~~~--------~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F 550 (629)
...+. +--|+..+ .++..++++..+|.+|++++.++++.+|+|++++|+++.++. +. .+.+..+..
T Consensus 302 ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~~-~~~f~e~v~ 379 (429)
T PF02347_consen 302 LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-FD-NPFFFEFVV 379 (429)
T ss_dssp EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-SS-SSSBSSEEE
T ss_pred eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-cC-CCCceeeee
Confidence 01110 11255554 467888999999999999999999999999999999983332 33 455544444
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHH
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEI 622 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i 622 (629)
...+. ... .++.++....| +.. .+.+. +.+-+|++ +.+|++|||.|++.+
T Consensus 380 ~~~~~------------~~~----~~l~~~~~~~g---l~~-~~~~~-~~~li~~T-E~~t~edid~lv~~f 429 (429)
T PF02347_consen 380 VFSKD------------KEV----EELLKRGIEGG---LNL-RYPDD-GALLICVT-ETRTKEDIDRLVEAF 429 (429)
T ss_dssp EESS-------------HHH----HHHHHTT-------EEE-GGG-S-SEEEEE---TT--HHHHHHHHH--
T ss_pred ecCCc------------HHH----HHHHHHHHhcC---CCc-cccCC-CeEEEEcc-CCCCHHHHHHHHhcC
Confidence 43211 111 13555565666 222 22232 37999998 999999999999864
No 24
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.92 E-value=2.6e-23 Score=243.06 Aligned_cols=390 Identities=13% Similarity=0.094 Sum_probs=259.4
Q ss_pred CChhHHHHhhcccCCCCCCChhHHHHHHHHHhhcccccCCcccccccccccccCCCCHHHHHHhhccCCCCCCCCHHHHH
Q psy1785 123 VNPEELEKKLELGFNAGPSSHGKLIDLMKTVIQYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLELGFNAGPSSHAKLI 202 (629)
Q Consensus 123 ~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~~lp~~~~~~~~il 202 (629)
++++|.++||. -.+.+.+.+.+.++ .|+.++..-++.+|+ +.+|.+++
T Consensus 17 ~~~~~~~~ml~------~~g~~s~~~l~~~~-------------------------iP~~i~~~~~l~lp~-~~sE~e~~ 64 (954)
T PRK05367 17 PSAADQQAMLA------ALGADSLDALIDQA-------------------------VPASIRLAEPLDLPA-ALSEAEAL 64 (954)
T ss_pred cCHHHHHHHHH------hcCCCCHHHHhhhh-------------------------CCHHHhcCCCCCCCC-CCCHHHHH
Confidence 46889999997 23444444444432 144554333456774 68999999
Q ss_pred HHHHHHhcccccC----CCCccccccCCCC-ChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCe
Q psy1785 203 DLMKTVIQYSVKT----GHPYFVNQLFSSV-DPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDG 277 (629)
Q Consensus 203 ~~l~~~~~~~~~~----~~p~~~g~~~s~~-~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g 277 (629)
++++++...+... +.+.|..+.|+.. ..+.-..+|+|+++ +++.|.+++..+.-.+.++++++|+|++..+.
T Consensus 65 ~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~yt---PyQ~EisQG~Leal~~~Qt~la~LtG~~~ana 141 (954)
T PRK05367 65 AELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYT---PYQPEISQGRLEALLNFQTMVADLTGLEIANA 141 (954)
T ss_pred HHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccC---CCChHHHHHHHHHHHHHHHHHHHHHCCChhhc
Confidence 9999998776432 2222322333322 22333446788876 88999999999999999999999999999999
Q ss_pred EEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH----HHHHcCCCCCCEEEEecCCCCCCCHH
Q psy1785 278 IFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK----LAAFEGLGSDNVYLIKTDARGRMLPE 353 (629)
Q Consensus 278 ~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k----aa~~lGlg~~~v~~V~~d~~g~~d~~ 353 (629)
.+++++|.+...++++.+.+ +| .+..|+++...|++... .++..|+ +|+.++.+++. +
T Consensus 142 Sl~d~aTAa~ea~~~a~~~~-------~~----~~~~vlv~~~~hP~~~~v~~t~a~~~G~---ev~~~~~~~d~--~-- 203 (954)
T PRK05367 142 SLLDEATAAAEAMALAKRVS-------KS----KSNRFFVDDDVHPQTLDVLRTRAEPLGI---EVVVGDAAKAL--D-- 203 (954)
T ss_pred cccccHHHHHHHHHHhhhhc-------cC----CCCEEEEcCccCHHHHHHHHHHHHhCCC---EEEEecCccCC--C--
Confidence 99999998876554433322 01 02468889999998654 3567898 99999976521 1
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-e-cCccccccccccccccccccccccCCc
Q psy1785 354 SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-T-WNPHKLLTAPQQCSVFLTRRNYVIEVV 431 (629)
Q Consensus 354 ~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A-~gg~~l~~~~~~~~~~l~~~~~~i~~g 431 (629)
.... +.+...-++.+|.+.|+.+|+++||++|+++.| + .....++.+ . -+.|
T Consensus 204 ------------~~~~-~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~---------p----ge~G 257 (954)
T PRK05367 204 ------------HDDV-FGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTP---------P----GEMG 257 (954)
T ss_pred ------------cccE-EEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCC---------h----hhcC
Confidence 0123 444555689999999999999999999999999 3 212111212 1 2448
Q ss_pred ceEEEeCCCCCCCCCCc-----cEEEEEeccchhhhhhcCCCCccccCCcCCCc--cc----CCCCccC--CCCC-Cc--
Q psy1785 432 ADSVTWNPHKLLTAPQQ-----CSVFLTRHQSVLTECHSASASYLFQKDKFYDT--KY----DSGDKHI--QCGR-KP-- 495 (629)
Q Consensus 432 aDsv~~~~HK~l~~P~~-----~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~--~~----~~~~~~~--~~sr-~~-- 495 (629)
||+++.++|||+ +|.+ +|+|++|++ +.+.. ++.+-+.....++ .+ .+.+..+ +.+. ..
T Consensus 258 aDi~vgs~qkfg-~P~g~GGP~aGflavr~~-~~r~l----pgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict 331 (954)
T PRK05367 258 ADIAVGSAQRFG-VPMGFGGPHAAYFAVRDA-YKRSM----PGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICT 331 (954)
T ss_pred CCEEEeeCcccC-CCCCCCCCCEEEEEECHH-HHhhC----CCCeeeeecccCCCcccccccccccccccccccccccch
Confidence 999999999995 4555 999999984 33221 1222211110011 01 1111111 1111 11
Q ss_pred ----chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 496 ----DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 496 ----~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
.++..++++..+|.+|++++.++...+++|++++|++ .|+++.. ++.+.+++|+.. ..
T Consensus 332 ~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~-~~~f~~~~~~~~-~~--------------- 393 (954)
T PRK05367 332 AQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVH-DSFFDTLTVEVG-GD--------------- 393 (954)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCC-CCCCCeEEEeCC-CC---------------
Confidence 1234445567789999999999999999999999987 6999887 677888888742 10
Q ss_pred hHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 572 KVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 572 ~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..++.++|.++|... . ... .+.+|++++ +.+|++|||.|++.+.
T Consensus 394 --~~~i~~~l~~~gi~~-~--~~~--~~~l~is~~-e~~t~~did~l~~~l~ 437 (954)
T PRK05367 394 --AAAVLARALAAGINL-R--RVD--DDHVGISLD-ETTTREDLAALLAVFG 437 (954)
T ss_pred --HHHHHHHHHHCCcee-c--ccc--CCEEEEEec-ccCCHHHHHHHHHHHc
Confidence 136788898998643 1 111 246999996 9999999999999986
No 25
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.92 E-value=1.6e-22 Score=217.37 Aligned_cols=317 Identities=17% Similarity=0.198 Sum_probs=222.1
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH--
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI-- 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si-- 325 (629)
+..++....+..++.+++++++|.+ ....++++|+|+++..++.+..... .|...|+++..+|++.
T Consensus 35 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~-----------~~g~~vl~~~~~~~~~~~ 103 (373)
T cd06453 35 HELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRAN-----------KPGDEIVTSVMEHHSNIV 103 (373)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcC-----------CCCCEEEECcchhHHHHH
Confidence 3445666777788899999999998 5678899999999777776544310 1344577888999985
Q ss_pred --HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE
Q psy1785 326 --KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 326 --~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV 403 (629)
.+.++..|+ +++.|++++++.+|+++|++.+.+ .+.+|+.++.++.+|.++|+++|.++|+++|+++|+
T Consensus 104 ~~~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~------~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~ 174 (373)
T cd06453 104 PWQQLAERTGA---KLKVVPVDDDGQLDLEALEKLLTE------RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLV 174 (373)
T ss_pred HHHHHHhhcCc---EEEEeecCCCCCcCHHHHHHHhcC------CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEE
Confidence 345557788 999999998999999999999864 355788889999999999999999999999999999
Q ss_pred --ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCC---cCC
Q psy1785 404 --TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKD---KFY 478 (629)
Q Consensus 404 --A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~---~~~ 478 (629)
+++......+ .. +.|+|++++++|||++. .++|+++++++ .+.... .+..+.. ..+
T Consensus 175 D~a~~~~~~~~~---------~~----~~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~~~~~----~~~~g~~~~~~~~ 235 (373)
T cd06453 175 DGAQSAGHMPVD---------VQ----DLGCDFLAFSGHKMLGP-TGIGVLYGKEE-LLEEMP----PYGGGGEMIEEVS 235 (373)
T ss_pred EhhhhcCceeee---------cc----ccCCCEEEeccccccCC-CCcEEEEEchH-HhhcCC----CeecCCCcccccc
Confidence 5543322111 11 23599999999999987 78898888763 443321 1111100 000
Q ss_pred --CcccCCCCccCCCCCC--cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEee
Q psy1785 479 --DTKYDSGDKHIQCGRK--PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYI 553 (629)
Q Consensus 479 --~~~~~~~~~~~~~sr~--~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~ 553 (629)
...+......+..+.. ...+.+|.+++.+..+|++++.++..++++++++.|+++++++++.+ ....+.++|.+.
T Consensus 236 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (373)
T cd06453 236 FEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE 315 (373)
T ss_pred ccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC
Confidence 0001111111122222 25778899999998899999999999999999999999999998852 134567777652
Q ss_pred CCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee-------cCCccceEEEeecCCCCCHHHHHHHHHHH
Q psy1785 554 PPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQP-------IHALPNFFRLVLQNSALDHSDMDYFIDEI 622 (629)
Q Consensus 554 p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~-------~~~~~~~lR~~~~n~~~t~edid~l~~~i 622 (629)
. .. ..++.++|.++|..+-.... ..+..+++|++++ +.+|++|||++++.|
T Consensus 316 ~--~~---------------~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l 373 (373)
T cd06453 316 G--IH---------------PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL 373 (373)
T ss_pred C--cC---------------HHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence 1 10 13577788888864321111 0122458999996 999999999999864
No 26
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.92 E-value=3.7e-22 Score=217.01 Aligned_cols=320 Identities=15% Similarity=0.174 Sum_probs=223.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH----HH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI----KK 327 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si----~k 327 (629)
+.......++.+.+++++|.+ ..+.++++|+|+++..++.+...... .|...|+++...|+|. .+
T Consensus 58 ~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~----------~~g~~vl~~~~~~~s~~~~~~~ 127 (403)
T TIGR01979 58 VRATEAYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNL----------KAGDEIVISEMEHHANIVPWQL 127 (403)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcC----------CCCCEEEECcchhhHHHHHHHH
Confidence 344455668889999999998 46899999999986655544322111 1345688888888874 35
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.|+++++|.+|+++|++++.+ .+.+|+.++.++.+|.+.|+++|.++|+++|++++| ++
T Consensus 128 ~~~~~g~---~~~~v~~~~~~~~~~~~l~~~i~~------~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~ 198 (403)
T TIGR01979 128 LAERTGA---TLKFIPLDDDGTLDLDDLEKLLTE------KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQ 198 (403)
T ss_pred HHHhcCc---EEEEEecCCCCCCCHHHHHHHhcc------CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchh
Confidence 6667888 999999999999999999998854 366788899999999999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc--CC---Cc
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK--FY---DT 480 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~--~~---~~ 480 (629)
+.+..... .. +.++|++++++||+++ |.|+|+++++++ .+... .++...... .+ ..
T Consensus 199 ~~g~~~~~---------~~----~~~~d~~~~s~~K~~g-p~G~g~l~~~~~-~~~~~----~~~~~g~~~~~~~~~~~~ 259 (403)
T TIGR01979 199 AVPHMPVD---------VQ----ALDCDFYVFSGHKMYG-PTGIGVLYGKEE-LLEQM----PPFLGGGEMIAEVSFEET 259 (403)
T ss_pred hcCccccC---------cc----ccCCCEEEEecccccC-CCCceEEEEchH-HHhcC----CCeecCCCceeecccCcc
Confidence 54332211 11 2259999999999875 889999998764 33321 111111000 00 00
Q ss_pred ccCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC---CCceEEEEEeeCC
Q psy1785 481 KYDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE---PECTNISFWYIPP 555 (629)
Q Consensus 481 ~~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~---p~~~~v~F~~~p~ 555 (629)
.+....+.++.|.+. ..+.++.+++.+...|++++.++..++++++.+.|+++++++++.++ +..++++|.+.+.
T Consensus 260 ~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~ 339 (403)
T TIGR01979 260 TYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGV 339 (403)
T ss_pred ccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCc
Confidence 011111223333332 45777888888777789999999999999999999999999988621 2367888876321
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee--------cCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQP--------IHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~--------~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
. ..++.+.|.++|.. +.... ..+...++|+++. .++|++||+++++.|+++.+
T Consensus 340 --~---------------~~~~~~~L~~~gI~-v~~g~~~~~~~~~~~~~~~~iRiS~~-~~~t~~di~~l~~~l~~~~~ 400 (403)
T TIGR01979 340 --H---------------PHDVGTILDEEGIA-VRSGHHCAQPLMRRFGVPATCRASFY-IYNTEEDIDALVEALKKVRK 400 (403)
T ss_pred --C---------------HHHHHHHHhhCCEE-EcchhhhhHHHHHHhCCCCEEEEEec-cCCCHHHHHHHHHHHHHHHH
Confidence 1 12456677777753 33211 0122358999996 99999999999999998876
Q ss_pred cC
Q psy1785 628 DL 629 (629)
Q Consensus 628 ~l 629 (629)
.|
T Consensus 401 ~~ 402 (403)
T TIGR01979 401 FF 402 (403)
T ss_pred Hh
Confidence 54
No 27
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.92 E-value=4.3e-23 Score=212.92 Aligned_cols=357 Identities=13% Similarity=0.139 Sum_probs=255.1
Q ss_pred CCCCHHHHHHHHHHHhcccccC----CCCccccccCCCCC-hHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHH
Q psy1785 194 GPSSHAKLIDLMKTVIQYSVKT----GHPYFVNQLFSSVD-PYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRT 268 (629)
Q Consensus 194 ~~~~~~~il~~l~~~~~~~~~~----~~p~~~g~~~s~~~-~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~ 268 (629)
.+.+|.++++.++.+...+... +.+.|..++|+.+. .+---.+|+|+|+ +|+.|.|++..+.-.+.+..+++
T Consensus 55 ~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYT---PYQpEISQGrLqaLfefQtlv~d 131 (450)
T COG0403 55 KPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYT---PYQPEISQGRLEALFEFQTLVAD 131 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCC---CCchhhhhHHHHHHHHHHHHHHH
Confidence 4679999999999998777422 23344445555444 3444567888888 89999999999999999999999
Q ss_pred HhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH----HcCCCCCCEEEEec
Q psy1785 269 IVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA----FEGLGSDNVYLIKT 344 (629)
Q Consensus 269 l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~----~lGlg~~~v~~V~~ 344 (629)
|.|++-.+..+..++|.+...++++-|... .++-.+++++..|+......+ -+|+ +|+.++.
T Consensus 132 LTGm~VANASm~DeaTAaAEAm~ma~r~~k-----------~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~---~i~~~~~ 197 (450)
T COG0403 132 LTGLDVANASMLDEATAAAEAMLMAKRVTK-----------KKRNKFLVPKDVHPQTLDVLRTRAEGLGI---EIEVVDA 197 (450)
T ss_pred HhCCCcccchhhhhHHHHHHHHHHHHHhhc-----------CcCceEEecCCCCHHHHHHHHhhcccCce---EEEEecc
Confidence 999999999999999998877777666541 234568889999998655543 4455 6777666
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccc-cccCHHHHHHHHHHcCCeEEEecCccccccccccccccccc
Q psy1785 345 DARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLG-AFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 345 d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G-~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~~ 423 (629)
+ |.++|+++ .+ .-.+.|++-+.+ ..| .+.++.+|.+++|++|..+.|+-++..+-.- +.
T Consensus 198 ~-----d~~~l~~~-~~-----~~~~gv~vQyP~-~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL--------~p 257 (450)
T COG0403 198 D-----DLDDLESA-DD-----GDVFGVLVQYPN-TFGIVEEDLRALIEAAHSAGALVIVAADPLALGLL--------KP 257 (450)
T ss_pred c-----hhhhhhhc-cc-----cCeEEEEEecCC-CCCccchhHHHHHHHHhhcCCEEEEEechhHhhcc--------CC
Confidence 5 77777776 32 135666666655 556 7778999999999999998885544333110 11
Q ss_pred cccccCCcceEEEeCCCCCCCCCCc-----cEEEEEecc-------------------chhhhhhcCCCCccccCCcCCC
Q psy1785 424 RNYVIEVVADSVTWNPHKLLTAPQQ-----CSVFLTRHQ-------------------SVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 424 ~~~~i~~gaDsv~~~~HK~l~~P~~-----~g~ll~r~~-------------------~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
. -+.|||+++.+.|- +|+|++ +|+|.+|++ ..++.+++.+.++|++...+++
T Consensus 258 P---Ge~GADIvvG~~Qr-fGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSN 333 (450)
T COG0403 258 P---GEFGADIVVGSAQR-FGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSN 333 (450)
T ss_pred c---cccCCceEEecCcc-cCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchh
Confidence 1 35689999999994 567766 778888873 1222334445555555554443
Q ss_pred cccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCCCceEEEEEeeCCCC
Q psy1785 480 TKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p~~~~v~F~~~p~~~ 557 (629)
+ |+.++ .++...+++-.+|.+|++++.++.++++.+|+++|+++. |++++. +..+..+++++..
T Consensus 334 I----------CTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~-~~fFdt~~v~~~~--- 399 (450)
T COG0403 334 I----------CTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVF-DHFFDTFTVRVPE--- 399 (450)
T ss_pred h----------hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecc-ccceeeEEEecch---
Confidence 3 66665 456666777788999999999999999999999999763 699988 6888999998631
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
+++..+.++....|.-+ ..... ..+-++++ +.+|++||+.|++++...
T Consensus 400 --------------~~~~~l~~~~~~~G~~L---~~~~~--~~~~ia~t-Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 400 --------------EVAEALLAAAIAGGINL---RRVDA--DTVLIALT-ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred --------------hHHHHHHHHHHhcCCce---eeecC--CceEEEee-cccCHHHHHHHHHHHhhh
Confidence 12245556665666321 11222 24677886 999999999999998764
No 28
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.92 E-value=1.3e-22 Score=233.27 Aligned_cols=367 Identities=12% Similarity=0.099 Sum_probs=248.9
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHHHHHhcccccC----CCCccccccCCCCC-hHHHHHHHHHHhcCCCccccccChh
Q psy1785 180 PEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSVKT----GHPYFVNQLFSSVD-PYGLVGQWLADALNPSVYTYEVSPV 254 (629)
Q Consensus 180 ~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~~~----~~p~~~g~~~s~~~-~~~~~~~~lt~~~n~~~~~~~~~p~ 254 (629)
|+.++..-++.+|+ +.+|.+++++++++...+... +.+.|..++|+... .+.-..+|+|+++ +++.|.+++
T Consensus 31 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tayt---PyQ~EisQG 106 (939)
T TIGR00461 31 PPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYT---PYQPEISQG 106 (939)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCC---CCChhhhhH
Confidence 44444333456775 679999999999998776433 33444444455444 4455667888887 899999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH----HHH
Q psy1785 255 FSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK----LAA 330 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k----aa~ 330 (629)
..++-.+.++++++|.|++..+..+.+++|.+...++++.+... + ++..|+++...|+.... -++
T Consensus 107 ~Le~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~-------~----~~~~vlv~~~~hP~~~~v~~t~a~ 175 (939)
T TIGR00461 107 RLEALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSK-------K----KANKFFVAKDLHPQTKSVLHTRAK 175 (939)
T ss_pred HHHHHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhc-------C----CCCEEEECCCCCcchHHHHHHHHH
Confidence 99999999999999999999999999999987765555433220 1 23457889999987542 346
Q ss_pred HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccc
Q psy1785 331 FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKL 410 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l 410 (629)
..|+ +|+.++ +++|++.+ .. +++....++..|.+.|+.+|++++|+.|.++.|+-+...+
T Consensus 176 ~~g~---~v~~~~--------~~~l~~~~--------~~-~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~al 235 (939)
T TIGR00461 176 PFGI---EVIVVD--------CSDIKKAV--------DV-FGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMAL 235 (939)
T ss_pred hcCc---EEEEEc--------HHHHhhcC--------CE-EEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHHh
Confidence 7788 888874 34454444 12 4555667788899999999999999999999883333322
Q ss_pred ccccccccccccccccccCCcceEEEeCCCCCCC-----CCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcc----
Q psy1785 411 LTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLT-----APQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK---- 481 (629)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~-----~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~---- 481 (629)
... +.. -+.|||+++.+.|+|+. +|. .|++.+|++ +.+. -|..+-+...+.++.
T Consensus 236 ~ll--------~~P---ge~GaDi~vg~~q~fg~p~g~GGP~-aG~~a~~~~-l~r~----lPgrivG~s~D~~G~~~~~ 298 (939)
T TIGR00461 236 TLL--------TPP---GHYGADIVLGSSQRFGVPMGYGGPH-AAFFAVKDE-YNRK----MPGRIVGVSKDALGNTALR 298 (939)
T ss_pred CCc--------CCH---HHcCCcEEeeCCCccCCCCCCCCCc-eeeeeecHh-hHhh----CCCCceeEEecCCCCccce
Confidence 111 111 24589999776666653 344 888989874 2221 123332211111110
Q ss_pred --cCCCCccCC--------CCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE
Q psy1785 482 --YDSGDKHIQ--------CGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF 550 (629)
Q Consensus 482 --~~~~~~~~~--------~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F 550 (629)
..+.+.+|. |+..+ .++...+++..+|.+|++++.++.+.++.+|++.|++ .|++++. ++.+.++++
T Consensus 299 l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~-~~fF~~~~v 376 (939)
T TIGR00461 299 LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELIN-KTWFDTLTV 376 (939)
T ss_pred eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccC-CCccceEEE
Confidence 111111110 12121 2344456688899999999999999999999999998 6999998 688888888
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
++.-.. +.++.+++.++|.. +.. .. .+.+++|++ +.+|++||+.|++.+.
T Consensus 377 ~~~~~~-----------------~~~i~~~~~~~gi~-l~~--~~--~~~i~~s~~-E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 377 KVGNGI-----------------SSELLKAAEEFNIN-LRA--VD--TTTVGIALD-ETTTKADVENLLKVFD 426 (939)
T ss_pred EeCCCC-----------------HHHHHHHHHHCCCe-eee--cC--CCEEEEEee-cCCCHHHHHHHHHHhc
Confidence 762000 13678888899965 332 11 247999996 9999999999999884
No 29
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.91 E-value=1.2e-22 Score=236.47 Aligned_cols=360 Identities=12% Similarity=0.089 Sum_probs=238.9
Q ss_pred ccCCC--CCCCCHHHHHHHHHHHhcccccC----CCCccccccCCCC-ChHHHHHHHHHHhcCCCccccccChhHHHHHH
Q psy1785 188 ELGFN--AGPSSHAKLIDLMKTVIQYSVKT----GHPYFVNQLFSSV-DPYGLVGQWLADALNPSVYTYEVSPVFSLMEE 260 (629)
Q Consensus 188 ~~~lp--~~~~~~~~il~~l~~~~~~~~~~----~~p~~~g~~~s~~-~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~ 260 (629)
++.+| ..+.+|.+++++++++...+... +.+.|..++|+.+ ....-..+|+|+++ +|+.+.++...+.-.
T Consensus 75 ~l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~fiG~G~y~~~~P~~v~~~i~~~~~~~Tayt---PYqaEisQG~lqal~ 151 (993)
T PLN02414 75 SMKLSKYDEGLTESQMLEHMKSLASKNKVFKSYIGMGYYNTHVPPVILRNILENPGWYTQYT---PYQAEIAQGRLESLL 151 (993)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCCccccccCCCCCCccCCHHHHHHHHhChHHHhhcC---CCchHHHHHHHHHHH
Confidence 35677 23789999999999987665321 1122222233333 33333456677775 788888999999999
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH----HHHcCCCC
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL----AAFEGLGS 336 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka----a~~lGlg~ 336 (629)
+.++++++|+|++.++..+++++|.+...++++.+.. .| ++..|+++...|++.... ++-.|+
T Consensus 152 ~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~-------~g----~~~~VlVs~~~hP~~~~v~~t~a~~~Gi-- 218 (993)
T PLN02414 152 NYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNIL-------KG----KKKKFLIASNCHPQTIDVCQTRADGLGL-- 218 (993)
T ss_pred HHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcc-------cC----CCCEEEEcCccCHhHHHHHHHhhhhcCC--
Confidence 9999999999999999999999999876555543321 12 234688899999986544 345688
Q ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcc-ccccccc
Q psy1785 337 DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPH-KLLTAPQ 415 (629)
Q Consensus 337 ~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~-~l~~~~~ 415 (629)
+|+.++.+... .. +.. ...+.++-++.+|.+.|+.+|+++||++|+.+.|+-.+. .....
T Consensus 219 -eV~~v~~~~~~---------~~------~~~-v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iVaad~lal~~l~-- 279 (993)
T PLN02414 219 -EVVVADEKDFD---------YS------SGD-VCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVMATDLLALTMLK-- 279 (993)
T ss_pred -EEEEecchhhc---------cc------cCc-eEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEEEECHHHhcCCC--
Confidence 99999874311 00 111 234457778899999999999999999999998822222 11111
Q ss_pred cccccccccccccCCcceEEEeCCCCCCCCCCc-----cEEEEEeccchhhhhhcCCCCccccCCcCCCccc------CC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-----CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY------DS 484 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-----~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~------~~ 484 (629)
.. -+.|||+++.++|||+ +|.+ +|+|++|++ +.+ . .+..+-+.....++.. .+
T Consensus 280 ------~p----ge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~-~~r-~---~PgriVG~s~d~~g~~~~~l~Lqt 343 (993)
T PLN02414 280 ------PP----GEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQE-YKR-L---MPGRIIGVSVDSSGKPALRMAMQT 343 (993)
T ss_pred ------CH----hhccCcEEEECCCccc-cCCCCCCCCeeEEEECHH-HHh-h---CCCcccCcccCCCCCccccccccc
Confidence 01 1347999999999998 4555 799999985 222 1 2222222111111100 11
Q ss_pred CCccC--CCC-CCc-chHHHHHH-----HHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCC
Q psy1785 485 GDKHI--QCG-RKP-DVLKFWFM-----WKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPP 555 (629)
Q Consensus 485 ~~~~~--~~s-r~~-~al~~w~~-----l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~ 555 (629)
....+ +.+ ... ...+++.. +..+|..|++++.+++.++++|++++|.+ .|+++.. +|.+.+|+|++. .
T Consensus 344 ReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~-~G~~~~~-~~~f~~vt~~~~-~ 420 (993)
T PLN02414 344 REQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK-LGFQVQS-LPFFDTVKVKCS-D 420 (993)
T ss_pred ccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh-cCCccCC-CCCcCeEEEecC-C
Confidence 11111 111 111 12333333 34679999999999999999999999987 5899987 688999999852 1
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..++.++|.++|.. +... .+ +.+|+|++ +.+|++|||.|++.|..+
T Consensus 421 ------------------~~~v~~~L~~~gI~-l~~~--~~--~~lrvs~~-e~~T~edId~L~~~l~~~ 466 (993)
T PLN02414 421 ------------------ADAIADAAAKVGIN-LRVV--DA--NTVTVSFD-ETTTLEDVDKLFKVFAGG 466 (993)
T ss_pred ------------------HHHHHHHHHHCCCe-eEEe--cC--CeEEEEee-ccCCHHHHHHHHHHHccc
Confidence 13578888889863 3321 12 36999995 999999999999999643
No 30
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.91 E-value=1.7e-22 Score=230.87 Aligned_cols=382 Identities=14% Similarity=0.130 Sum_probs=256.8
Q ss_pred CCCCHHHHHHHHHHHhcccccCCC-CccccccCC--CC---ChHHHHHHHHHHhcCCCcccc-ccChhHHHHHHHHHHHH
Q psy1785 194 GPSSHAKLIDLMKTVIQYSVKTGH-PYFVNQLFS--SV---DPYGLVGQWLADALNPSVYTY-EVSPVFSLMEEHVLAQM 266 (629)
Q Consensus 194 ~~~~~~~il~~l~~~~~~~~~~~~-p~~~g~~~s--~~---~~~~~~~~~lt~~~n~~~~~~-~~~p~~~~~E~~~~~~l 266 (629)
...+|.+++++++++...+....+ ..|.|-..- +. ...+...+|++. .+++. +.+++..++-.+..+++
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~----hPyqp~e~sQG~lq~i~elq~~l 552 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL----HPFAPREQAEGYRAMIDELEAWL 552 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC----CCCCchhhhcCHHHHHHHHHHHH
Confidence 357999999999999877755322 334332000 10 001123444443 57776 78999999999999999
Q ss_pred HHHhCCCCCCeEEeC-CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecC
Q psy1785 267 RTIVGFQGGDGIFCP-GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTD 345 (629)
Q Consensus 267 ~~l~G~~~~~g~~~~-GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d 345 (629)
++++|++.. .+.+ +|+.+++.++++.|... ..+|- ..+-+|+++...|.+....+...|+ +|+.||+|
T Consensus 553 ~eLtGmd~~--Sl~p~sGA~gE~A~Lmair~yh----~~~Ge--~~r~~vLIp~saHgtNpasa~~~Gi---eVv~Vp~D 621 (954)
T PRK12566 553 CAITGFDAI--CMQPNSGAQGEYAGLLAIRRYH----RSRGQ--SQRDICLIPSSAHGTNPASAQMAGM---RVVIVECD 621 (954)
T ss_pred HHHHCCCeE--eecCCchHHHHHHHHHHHHHHH----HhcCC--CCCCEEEecccccccCHHHHHHCCC---EEEEeccC
Confidence 999999864 7777 56677777777766532 12332 1245788899999887777888899 99999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-ecCc--ccccccccccccccc
Q psy1785 346 ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-TWNP--HKLLTAPQQCSVFLT 422 (629)
Q Consensus 346 ~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A~gg--~~l~~~~~~~~~~l~ 422 (629)
++|.+|+++|+++|.+. .....+|..++.++..+..+|+++|++++|++|.+++| +-.. ...+..
T Consensus 622 ~~G~iDle~L~a~I~~~---~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~--------- 689 (954)
T PRK12566 622 PDGNVDLDDLKAKAAAA---GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLAR--------- 689 (954)
T ss_pred CCCCcCHHHHHHHhhcc---CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCC---------
Confidence 99999999999999632 12466788888888887778899999999999999888 3222 222211
Q ss_pred ccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc-CCCcc-cCCCCccCCCCCCc-chHH
Q psy1785 423 RRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK-FYDTK-YDSGDKHIQCGRKP-DVLK 499 (629)
Q Consensus 423 ~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~-~~~~~-~~~~~~~~~~sr~~-~al~ 499 (629)
. -+.|||++++++|||++.|.+.|+.+++.-...... .+|+.+-.. ..++. ...+..+..|...+ .++.
T Consensus 690 P----g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L----~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~ 761 (954)
T PRK12566 690 P----ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHL----APFVANHPVVPVEGPDPNNGAVSAAPWGSASILPI 761 (954)
T ss_pred h----hhcCCCEEEecCCcccCcCccCCCCccchhhhhhhh----hhhccCCCCcCCCCCCCCCCceeecccchHHHHHH
Confidence 1 134799999999999999999999988762211110 123332110 00010 01122222232222 3678
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC---CCceEEEEEeeCCC-CCCCCchhhHHHHHhhHHH
Q psy1785 500 FWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE---PECTNISFWYIPPS-LRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 500 ~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~---p~~~~v~F~~~p~~-~~~~~~~~~~~~~l~~~~~ 575 (629)
.|..++.+|.+ +++....++.+|+|++++|.+ ++++.... +.+..+.+...+-. ..+.. ..
T Consensus 762 A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~--~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~------------~~ 826 (954)
T PRK12566 762 SWMYIAMMGPQ-LADASEVAILSANYLANQLGG--AFPVLYRGRNERVAHECILDLRPLKAQTGIS------------EE 826 (954)
T ss_pred HHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHh--hCCCCcCCCCCCeeeEEEEEccccccccCCC------------HH
Confidence 89999999999 988888899999999999987 45554422 33455555443210 01110 13
Q ss_pred HHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 576 KIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.++|.+.|..... ..+.. .+.+|++++ ...+++|||+|+++|+.+.++
T Consensus 827 dvakRL~d~Gihapt-~~fPv-~~~LmIepT-E~eskeEIDrf~eAL~~I~~e 876 (954)
T PRK12566 827 DVAKRLMDYGFHAPT-MSFPV-PGTLMVEPT-ESESKAELDRFVEAMLSIRAE 876 (954)
T ss_pred HHHHHHHHCCcEEeE-Eeecc-CCEEEEEee-eeCCHHHHHHHHHHHHHHHHH
Confidence 577888888853222 22333 458999997 999999999999999887654
No 31
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.91 E-value=8.7e-22 Score=212.38 Aligned_cols=306 Identities=18% Similarity=0.195 Sum_probs=215.3
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
++....+.+++.+++++++|.+..+.+|++|+|+++..++....... .++.+|+++...|+++......
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~-----------~~~~~vv~~~~~~~s~~~~~~~ 105 (379)
T TIGR03402 37 GGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQ-----------PEKRHIITTAVEHPAVLSLCQH 105 (379)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhc-----------CCCCeEEEcccccHHHHHHHHH
Confidence 34556677889999999999987789999999999988887664320 1234677889999987755443
Q ss_pred ---cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecC
Q psy1785 332 ---EGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWN 406 (629)
Q Consensus 332 ---lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~g 406 (629)
.|+ +++.||.+++|.+|+++|++.|.+ .+.+|+.++.++.+|.+.|+++|.++|+++|++++| +++
T Consensus 106 ~~~~G~---~v~~v~~~~~g~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~ 176 (379)
T TIGR03402 106 LEKQGY---KVTYLPVDEEGRLDLEELRAAITD------DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQA 176 (379)
T ss_pred HHHcCC---EEEEEccCCCCcCCHHHHHHhcCC------CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECccc
Confidence 477 999999998999999999998853 356788888999999999999999999999999999 444
Q ss_pred ccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCC
Q psy1785 407 PHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 407 g~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 486 (629)
.+....+ .. +.++|++++++|| +++|.|+|++++|+...+ .+ ++..... .
T Consensus 177 ~g~~~~~---------~~----~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~------~p-~~~g~~~---------~ 226 (379)
T TIGR03402 177 VGKIPID---------LK----EMNIDMLSLSGHK-LHGPKGVGALYIRKGTRF------RP-LLRGGHQ---------E 226 (379)
T ss_pred ccccccC---------cc----cCCCCEEEEcHHH-cCCCCceEEEEECCCCCC------CC-cccCCcc---------C
Confidence 3322211 11 2369999999999 567999999999875211 11 1211100 0
Q ss_pred ccCCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc-CCCcEEEccCC--C-ceEEEEEeeCCCCCCC
Q psy1785 487 KHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH-RPGFKLVLDEP--E-CTNISFWYIPPSLRGK 560 (629)
Q Consensus 487 ~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~-~~g~~l~~~~p--~-~~~v~F~~~p~~~~~~ 560 (629)
...+.+... ..+.+..+++.. .++++++.++..++++++.+.|++ ++++++.. ++ . .++++|++....
T Consensus 227 ~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---- 300 (379)
T TIGR03402 227 RGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNG-DPTKRLPNTVNISFEYIE---- 300 (379)
T ss_pred CCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeC-CCccCCCCEEEEEecCCC----
Confidence 011222221 344445555543 456788888999999999999986 89999876 32 2 246777764211
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeec-------------------CCccceEEEeecCCCCCHHHHHHHHHH
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPI-------------------HALPNFFRLVLQNSALDHSDMDYFIDE 621 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~-------------------~~~~~~lR~~~~n~~~t~edid~l~~~ 621 (629)
. .++.+.|.++|.. +..... ....+.+|+++. .++|++|||++++.
T Consensus 301 --~-----------~~~~~~l~~~gI~-v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~-~~~t~~di~~~~~~ 365 (379)
T TIGR03402 301 --G-----------EAILLLLDMEGIC-ASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLS-RYNTEEDIDYVLEV 365 (379)
T ss_pred --H-----------HHHHHhhccCCEE-EEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcC-CCCCHHHHHHHHHH
Confidence 1 2456677677754 331110 001258999995 99999999999999
Q ss_pred HHHHhhc
Q psy1785 622 IERLGHD 628 (629)
Q Consensus 622 i~~l~~~ 628 (629)
|+++.++
T Consensus 366 l~~~~~~ 372 (379)
T TIGR03402 366 LPPIIAR 372 (379)
T ss_pred HHHHHHH
Confidence 9987643
No 32
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.91 E-value=9.8e-22 Score=213.98 Aligned_cols=351 Identities=14% Similarity=0.133 Sum_probs=236.7
Q ss_pred ccccccCCCCChHHHHHHHHHHhc-----CCCccccccChhHHHHHHHHHHHHHHHhCC-CCCCeEEeCCchhhHHHHHH
Q psy1785 219 YFVNQLFSSVDPYGLVGQWLADAL-----NPSVYTYEVSPVFSLMEEHVLAQMRTIVGF-QGGDGIFCPGGSMANGYAIS 292 (629)
Q Consensus 219 ~~~g~~~s~~~~~~~~~~~lt~~~-----n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~-~~~~g~~~~GgT~an~~al~ 292 (629)
.|+++-.+++.+-.++ +.+..++ |+....+..++.......++++.+++++|. +..+.+||+|+|+++..++.
T Consensus 25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~ 103 (406)
T PRK09295 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTEGINLVAN 103 (406)
T ss_pred EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHH
Confidence 5667666665544443 2232222 222223334555666677888999999998 45689999999998776554
Q ss_pred HHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH----HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCC
Q psy1785 293 CARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI----KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAV 368 (629)
Q Consensus 293 ~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si----~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~ 368 (629)
....... .|...|+++...|.+. ...++..|+ +++.|+.+++|.+|+++|++++.+ .
T Consensus 104 ~~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~i~~------~ 164 (406)
T PRK09295 104 SWGNSNV----------RAGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNPDGTLQLETLPALFDE------R 164 (406)
T ss_pred HhhhhcC----------CCcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCCCCCCHHHHHHhcCC------C
Confidence 3221110 2344677888888763 456677888 999999999999999999988854 3
Q ss_pred cEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC
Q psy1785 369 PFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP 446 (629)
Q Consensus 369 ~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P 446 (629)
+.+|..++.++.+|.+.|+++|.++|+++|++++| +++.+.... ... +.++|++++++||++ +|
T Consensus 165 t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~---------~~~----~~~~D~~~~s~~K~~-gp 230 (406)
T PRK09295 165 TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPV---------DVQ----ALDCDFYVFSGHKLY-GP 230 (406)
T ss_pred cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCcccc---------Cch----hcCCCEEEeehhhcc-CC
Confidence 56788899999999999999999999999999999 444332211 111 235999999999955 58
Q ss_pred CccEEEEEeccchhhhhhcCCCCccccCCc-C-----CCcccCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHH
Q psy1785 447 QQCSVFLTRHQSVLTECHSASASYLFQKDK-F-----YDTKYDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDK 518 (629)
Q Consensus 447 ~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~-~-----~~~~~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~ 518 (629)
.|+|+++++++ .+... +++...... . ....+......++.|.+. ..+.++.+++.+...|++++.++
T Consensus 231 ~G~G~l~~~~~-~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 305 (406)
T PRK09295 231 TGIGILYVKEA-LLQEM----PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEY 305 (406)
T ss_pred CCcEEEEEchH-hHhhC----CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 89999999774 33321 122221100 0 000011111223444342 56778888888877799999999
Q ss_pred HHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee-----
Q psy1785 519 SFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQP----- 593 (629)
Q Consensus 519 ~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~----- 593 (629)
..++++++.+.|+++++++++.+....++++|.+... . . ..+.+.|.+.|.. +....
T Consensus 306 ~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~--~----~-----------~~~~~~L~~~gI~-v~~g~~c~~~ 367 (406)
T PRK09295 306 EQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKH--H----A-----------YDVGSFLDNYGIA-VRTGHHCAMP 367 (406)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCc--C----H-----------HHHHHHHHhCCeE-EeccccchHH
Confidence 9999999999999999999987323468889975321 0 1 2355567667753 32111
Q ss_pred ---cCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 594 ---IHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 594 ---~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.-+...++|+++. .++|++|||+++++|+++..
T Consensus 368 ~~~~~~~~~~iRiS~~-~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 368 LMAYYNVPAMCRASLA-MYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred HHHHHCCCCEEEEEcc-CCCCHHHHHHHHHHHHHHHH
Confidence 0122347999995 99999999999999998754
No 33
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.91 E-value=1.7e-21 Score=211.57 Aligned_cols=320 Identities=13% Similarity=0.106 Sum_probs=222.8
Q ss_pred ChhHHHHHHHHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IK 326 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~ 326 (629)
++.......++.+.+++++|.+ ..+.++|+|+|+++..++....... . .|...|+++...|+| +.
T Consensus 55 ~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~--------~--~~gd~Vl~~~~~~~s~~~~~~ 124 (398)
T TIGR03392 55 AQSLTARYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPR--------L--QPGDEIIVSEAEHHANLIPWL 124 (398)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhcc--------C--CCCCEEEECCcchhHHHHHHH
Confidence 3444556677889999999995 4678999999998776665432110 0 134468888899977 34
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
..++..|+ +++.||+++++.+|+++|+++|.+ .+.+|..++.++.+|.+.|+++|.++|+++|++++| +
T Consensus 125 ~~~~~~g~---~v~~v~~~~~~~~~~~~l~~~i~~------~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a 195 (398)
T TIGR03392 125 MVAQQTGA---KVVKLPIGADLLPDIRQLPELLTP------RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGA 195 (398)
T ss_pred HHHHHcCc---EEEEEecCCCCCcCHHHHHHHhcc------CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhh
Confidence 56678888 999999998899999999988854 356788889999999999999999999999999999 5
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc-----CCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK-----FYD 479 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~-----~~~ 479 (629)
++...... ... +.++|.+++++||++ +|.|+|+++++++ .+... ..+...... ..+
T Consensus 196 ~~~~~~~~---------~~~----~~~~d~~~~s~~K~~-gp~G~G~l~~~~~-~~~~~----~~~~~~~~~~~~~~~~~ 256 (398)
T TIGR03392 196 QGVVHGPP---------DVQ----ALDIDFYAFSGHKLY-GPTGIGVLYGKTE-LLEAM----PPWQGGGKMLSHVSFDG 256 (398)
T ss_pred hhcCCCCC---------Chh----hcCCCEEEEeccccc-CCCceEEEEEcHH-HHhhC----CCeecCCceEeeccccc
Confidence 54322211 111 125899999999965 5889999988764 33322 111111000 000
Q ss_pred cccCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC
Q psy1785 480 TKYDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~ 557 (629)
..+......++.|.+. ..+.+..+++.+...|++++.++..++++++.+.|++++++++.. .+...+++|... +.
T Consensus 257 ~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~-~~~~~i~~~~~~--~~ 333 (398)
T TIGR03392 257 FIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFR-CPGSSLLAFDFA--GV 333 (398)
T ss_pred cccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC-CCCCcEEEEEeC--Cc
Confidence 0000011223333332 567778888887778899889999999999999999999999876 566778888753 11
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeec-------CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPI-------HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~-------~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
. ...+.++|.++|..+-+.... -+..+++|++++ .++|++|||+++++|+++.+.
T Consensus 334 ~---------------~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 334 H---------------HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFA-PYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred C---------------HHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEEEEee-ccCCHHHHHHHHHHHHHHHHH
Confidence 1 124666777777543222110 022358999996 899999999999999987654
No 34
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.91 E-value=6.6e-22 Score=230.28 Aligned_cols=375 Identities=16% Similarity=0.135 Sum_probs=254.4
Q ss_pred CCHHHHHHHHHHHhcccccCCCCcc-ccccCCCCChHHHHHHHHHH----hcCCCcccc-ccChhHHHHHHHHHHHHHHH
Q psy1785 196 SSHAKLIDLMKTVIQYSVKTGHPYF-VNQLFSSVDPYGLVGQWLAD----ALNPSVYTY-EVSPVFSLMEEHVLAQMRTI 269 (629)
Q Consensus 196 ~~~~~il~~l~~~~~~~~~~~~p~~-~g~~~s~~~~~~~~~~~lt~----~~n~~~~~~-~~~p~~~~~E~~~~~~l~~l 269 (629)
.+|-++++++.++-..+..-.+..+ .| .++.- ++-..++... ..+..++.. +..++..++-.++.++++++
T Consensus 504 ~se~~~~r~~~~l~~~~~~~~~~~~plg--sctmk-~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i 580 (993)
T PLN02414 504 HSEHELLRYLHRLQNKDLSLVHSMIPLG--SCTMK-LNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEI 580 (993)
T ss_pred cCHHHHHHHHHHHhhcccccccCCccCc--ccccc-cCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999988776654433221 12 11111 1111111111 233344443 34677778889999999999
Q ss_pred hCCCCCCeEEeCCch----hhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecC
Q psy1785 270 VGFQGGDGIFCPGGS----MANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTD 345 (629)
Q Consensus 270 ~G~~~~~g~~~~GgT----~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d 345 (629)
+|+ ...+|++++| ++++.++....+. .|- ..+.+|+++..+|.+....+...|+ +|+.||+|
T Consensus 581 ~g~--~~v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd--~~r~~vli~~~aH~sn~a~a~~~G~---~vv~v~~d 646 (993)
T PLN02414 581 TGF--DSFSLQPNAGAAGEYAGLMVIRAYHLS-------RGD--HHRNVCIIPVSAHGTNPASAAMCGM---KIVVVGTD 646 (993)
T ss_pred hCC--CeEEEcCCCcHHHHHHHHHHHHHHHhc-------cCC--CCCCEEEeCCCcCccCHHHHHHCCC---EEEEeccC
Confidence 999 5789999999 6666666554321 231 1345789999999999999999999 99999999
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-ecC--cccccccccccccccc
Q psy1785 346 ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-TWN--PHKLLTAPQQCSVFLT 422 (629)
Q Consensus 346 ~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A~g--g~~l~~~~~~~~~~l~ 422 (629)
++|.+|+++|+++|.+.. ....+|++++++|+.|.++||++|.++||++|..++| +-. ++..+..
T Consensus 647 ~~G~vDle~L~~~i~~~~---~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~--------- 714 (993)
T PLN02414 647 AKGNINIEELRKAAEAHK---DNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTS--------- 714 (993)
T ss_pred CCCCcCHHHHHHHHhccC---CCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCC---------
Confidence 999999999999997421 1367899999999999999999999999999999998 332 2212221
Q ss_pred ccccccCCcceEEEeCCCCCCCCCCc-----cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc--
Q psy1785 423 RRNYVIEVVADSVTWNPHKLLTAPQQ-----CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-- 495 (629)
Q Consensus 423 ~~~~~i~~gaDsv~~~~HK~l~~P~~-----~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-- 495 (629)
. -+.|+|+++++.||+++.|.| +|++++|+. +... -+..+..... ...+....+-.|+++.
T Consensus 715 p----~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p~---lPg~~v~~~~---~~~~r~~~s~iGt~~~a~ 782 (993)
T PLN02414 715 P----GFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPF---LPSHPVVPTG---GIPRPEKTQPLGTISAAP 782 (993)
T ss_pred c----cccCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hccc---CCCCccccCC---CcccccCCCCcCCccchh
Confidence 1 134799999999999998886 999998873 2221 1222211110 0000000111255442
Q ss_pred -----chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-C--CCceEEEEEeeCCC-CCCCCchhhH
Q psy1785 496 -----DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-E--PECTNISFWYIPPS-LRGKEDQADF 566 (629)
Q Consensus 496 -----~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~--p~~~~v~F~~~p~~-~~~~~~~~~~ 566 (629)
.++..|..++.+|.+|+++..++++.+|+|++++|++. +++... + +.+..+++...+-. -.+..
T Consensus 783 ~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~--~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~----- 855 (993)
T PLN02414 783 WGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGH--YPVLFRGKNGTCAHEFIIDLRPFKNTAGIE----- 855 (993)
T ss_pred hhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhh--CCccccCCCCCeeeeEEEeccccccccCCC-----
Confidence 35678999999999999999999999999999999874 444331 1 45566666553210 00110
Q ss_pred HHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 567 NELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 567 ~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
...+.++|.+.|..... ..+.. .+.+|++++ ...+++|||+|+++|+.+.++
T Consensus 856 -------~~di~krL~d~Gihapt-~~~pv-~~~lmiepT-E~~skeelDrf~~al~~i~~e 907 (993)
T PLN02414 856 -------PEDVAKRLMDYGFHAPT-MSWPV-PGTLMIEPT-ESESKAELDRFCDALISIREE 907 (993)
T ss_pred -------HHHHHHHHHHcCcEEee-ecccc-CCEEEEEee-eeCCHHHHHHHHHHHHHHHHH
Confidence 13578888888854222 22333 468999997 999999999999999887654
No 35
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.91 E-value=2e-21 Score=211.11 Aligned_cols=352 Identities=12% Similarity=0.119 Sum_probs=236.3
Q ss_pred ccccccCCCCChHHHHHHHHHHhcCC---C--ccccccChhHHHHHHHHHHHHHHHhCC-CCCCeEEeCCchhhHHHHHH
Q psy1785 219 YFVNQLFSSVDPYGLVGQWLADALNP---S--VYTYEVSPVFSLMEEHVLAQMRTIVGF-QGGDGIFCPGGSMANGYAIS 292 (629)
Q Consensus 219 ~~~g~~~s~~~~~~~~~~~lt~~~n~---~--~~~~~~~p~~~~~E~~~~~~l~~l~G~-~~~~g~~~~GgT~an~~al~ 292 (629)
.|+++-..++.+..+.. .+..+++. + ...+..+........++.+.+++++|. +..+.++++|+|+++..++.
T Consensus 21 ~yld~a~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~ 99 (401)
T PRK10874 21 VYLDSAATALKPQAVIE-ATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQ 99 (401)
T ss_pred EEEeCCcccCCCHHHHH-HHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHH
Confidence 46665555555444332 23333221 1 112222344556667888999999999 55788999999998776655
Q ss_pred HHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCC
Q psy1785 293 CARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAV 368 (629)
Q Consensus 293 ~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~ 368 (629)
....... .|...|+++...|+| +.+.++..|+ +++.||.++++.+|+++|++.|.+ .
T Consensus 100 ~~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~~~~d~~~l~~~i~~------~ 160 (401)
T PRK10874 100 SYARPRL----------QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGADRLPDVDLLPELITP------R 160 (401)
T ss_pred HhhhccC----------CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCCCCcCCHHHHHHhcCc------C
Confidence 4321100 134567888899976 4556677888 999999998899999999998854 3
Q ss_pred cEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC
Q psy1785 369 PFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP 446 (629)
Q Consensus 369 ~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P 446 (629)
+.+|..++.++.+|.+.|+++|.++|+++|++++| +++...... ... +.++|.+++++||++ +|
T Consensus 161 t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~---------~~~----~~~~d~~~~s~~K~~-gp 226 (401)
T PRK10874 161 TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPA---------DVQ----ALDIDFYAFSGHKLY-GP 226 (401)
T ss_pred cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccC---------Cch----hcCCCEEEEeccccc-CC
Confidence 56788899999999999999999999999999999 554322211 111 125999999999965 58
Q ss_pred CccEEEEEeccchhhhhhcCCCCccccCCcC----C-CcccCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHHH
Q psy1785 447 QQCSVFLTRHQSVLTECHSASASYLFQKDKF----Y-DTKYDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKS 519 (629)
Q Consensus 447 ~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~----~-~~~~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~ 519 (629)
.|+|+++++++ .+... ..+....... + +.......+.++.|... ..+.+..+++.+...|+.+..++.
T Consensus 227 ~G~G~l~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~ 301 (401)
T PRK10874 227 TGIGVLYGKSE-LLEAM----SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWS 301 (401)
T ss_pred CccEEEEEchH-HHhcC----CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 89999998763 34322 1111111000 0 00000011223333332 567778888887788888889999
Q ss_pred HHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC----
Q psy1785 520 FDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIH---- 595 (629)
Q Consensus 520 ~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~---- 595 (629)
.++++++.+.|+++||++++. ++..++++|.+.. .. ..++.+.|.++|.++.+.....
T Consensus 302 ~~l~~~l~~~l~~~~g~~~~~-~~~~~i~~~~~~~--~~---------------~~~~~~~L~~~gI~v~~g~~~~~~~~ 363 (401)
T PRK10874 302 RSLATLAEDALAKLPGFRSFR-CQDSSLLAFDFAG--VH---------------HSDLVTLLAEYGIALRAGQHCAQPLL 363 (401)
T ss_pred HHHHHHHHHHHhcCCCEEEeC-CCCCcEEEEEECC--cC---------------HHHHHHHHHHCCcEEeccccchHHHH
Confidence 999999999999999999886 5667788887531 11 1246677878886543322110
Q ss_pred ---CccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 596 ---ALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 596 ---~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+..+++|++++ .++|++|||+++++|+++.+.
T Consensus 364 ~~~g~~~~iRiS~~-~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 364 AALGVTGTLRASFA-PYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred HHhCCCCEEEEEec-ccCCHHHHHHHHHHHHHHHHH
Confidence 22358999996 899999999999999987654
No 36
>PLN02651 cysteine desulfurase
Probab=99.91 E-value=1.3e-21 Score=209.84 Aligned_cols=296 Identities=14% Similarity=0.173 Sum_probs=207.8
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH-
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA- 330 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~- 330 (629)
++....+..++.+.+++++|.+..+.+|++|+|+++..++..+..... .+...|+++...|+++.....
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~----------~~g~~vl~~~~~h~s~~~~~~~ 107 (364)
T PLN02651 38 GWESEDAVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYK----------DKKKHVITTQTEHKCVLDSCRH 107 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc----------CCCCEEEEcccccHHHHHHHHH
Confidence 344566677889999999999888899999999999888877654321 134468889999999766544
Q ss_pred --HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecC
Q psy1785 331 --FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWN 406 (629)
Q Consensus 331 --~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~g 406 (629)
..|+ +++.||++++|.+|+++|+++|.+ .+.+|..++.++.+|.++|+++|.++|+++|++++| +++
T Consensus 108 ~~~~g~---~v~~v~~~~~~~~d~~~l~~~i~~------~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~ 178 (364)
T PLN02651 108 LQQEGF---EVTYLPVKSDGLVDLDELAAAIRP------DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQA 178 (364)
T ss_pred HHhcCC---EEEEEccCCCCcCCHHHHHHhcCC------CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchh
Confidence 3466 899999998999999999998854 255788889999999999999999999999999999 555
Q ss_pred ccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCC
Q psy1785 407 PHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 407 g~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 486 (629)
.+.+..+ .. +.|+|++++++||| ++|.|+|++++|++. +... .+.+. .... .
T Consensus 179 ~g~~~~~---------~~----~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~-~~~l---~p~~~-g~~~---------~ 230 (364)
T PLN02651 179 VGKIPVD---------VD----DLGVDLMSISGHKI-YGPKGVGALYVRRRP-RVRL---EPLMS-GGGQ---------E 230 (364)
T ss_pred hCCcccC---------cc----cCCCCEEEechhhh-CCCCceEEEEEcCCC-CCCC---Ccccc-CCCc---------c
Confidence 5443322 11 23699999999998 679999999999853 2211 11111 1000 0
Q ss_pred ccCCCC-CCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc-CCCcEEEcc-CCC---ceEEEEEeeCCCCCC
Q psy1785 487 KHIQCG-RKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH-RPGFKLVLD-EPE---CTNISFWYIPPSLRG 559 (629)
Q Consensus 487 ~~~~~s-r~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~-~~g~~l~~~-~p~---~~~v~F~~~p~~~~~ 559 (629)
...+.+ ... ..+.+..+++.+-. +.+++.++..++++++.+.|++ +++++++.+ ++. .++++|.+. +..
T Consensus 231 ~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~--~~~- 306 (364)
T PLN02651 231 RGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFA--YVE- 306 (364)
T ss_pred CCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeC--CCC-
Confidence 011222 222 45666677777644 5588889999999999999986 689999873 122 358888763 211
Q ss_pred CCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee------------cC--C-----ccceEEEeecCCCCCHHHHH
Q psy1785 560 KEDQADFNELLHKVAPKIKERMMKSGSMMITYQP------------IH--A-----LPNFFRLVLQNSALDHSDMD 616 (629)
Q Consensus 560 ~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~------------~~--~-----~~~~lR~~~~n~~~t~edid 616 (629)
. .++.++|.+ +.++... +. | ..+.+|+|+. ++||++|||
T Consensus 307 ---~-----------~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~-~~~t~~did 364 (364)
T PLN02651 307 ---G-----------ESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVG-RFTTEEEVD 364 (364)
T ss_pred ---H-----------HHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcC-CCCCHHHcC
Confidence 1 234455532 3333111 00 1 1258999995 999999986
No 37
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.91 E-value=2.2e-21 Score=208.86 Aligned_cols=310 Identities=14% Similarity=0.130 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHHHHhCCCCC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH----HHHH
Q psy1785 256 SLMEEHVLAQMRTIVGFQGG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK----KLAA 330 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~----kaa~ 330 (629)
.....++.+++++++|.+.. +.++++|+|+++..++.. .. .+...|+++..+|.++. ..++
T Consensus 43 ~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~-~~-------------~~gd~vl~~~~~~~~~~~~~~~~~~ 108 (376)
T TIGR01977 43 SREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKG-LL-------------KEGDHVITTPMEHNSVARPLECLKE 108 (376)
T ss_pred HHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHh-cc-------------CCCCEEEECcchhhHHHHHHHHHHH
Confidence 35567788899999998764 788999999987766543 11 13345777788898864 3455
Q ss_pred HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 331 FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
..|+ +++.|+.++++.+|+++|++++.+ .+.+|..+..++.+|.+.|+++|.++|+++|++++| +++.+
T Consensus 109 ~~g~---~~~~v~~~~~~~~d~~~l~~~~~~------~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g 179 (376)
T TIGR01977 109 QIGV---EITIVKCDNEGLISPERIKRAIKT------NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAG 179 (376)
T ss_pred HcCc---EEEEEecCCCCCcCHHHHHHhcCC------CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccC
Confidence 5687 999999998899999999998853 356788889999999999999999999999999999 55544
Q ss_pred ccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCcc
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKH 488 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 488 (629)
..... .. ..|+|++++++|||+++|.|+|+++++++..+.........+ .... .+...... ..
T Consensus 180 ~~~~~---------~~----~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~-~r 242 (376)
T TIGR01977 180 VIPID---------MT----ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGS-HSAL--IDQPSELP-DR 242 (376)
T ss_pred ccCCC---------ch----hcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcc-cccc--ccccccch-hh
Confidence 33211 11 125999999999999999999999998865322211100000 0000 00000000 01
Q ss_pred CCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc---CCCceEEEEEeeCCCCCCCCch
Q psy1785 489 IQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD---EPECTNISFWYIPPSLRGKEDQ 563 (629)
Q Consensus 489 ~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~---~p~~~~v~F~~~p~~~~~~~~~ 563 (629)
++.+... ..+.++.+++.+...|++++.++..++++++.+.|+++++++++.+ ....++++|.... ..
T Consensus 243 ~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~----- 315 (376)
T TIGR01977 243 FESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEG--ID----- 315 (376)
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECC--CC-----
Confidence 1222221 4577788888888899999999999999999999999999998862 1236778887631 11
Q ss_pred hhHHHHHhhHHHHHHHHHHhc-CcEEEeeeec----------CCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 564 ADFNELLHKVAPKIKERMMKS-GSMMITYQPI----------HALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~~~----------~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
..++.+.|.++ |. .+..... ......||++++ ..+|++||+++++.|++
T Consensus 316 ----------~~~~~~~L~~~~gi-~v~~g~~~~~~~~~~~g~~~~~~iRis~~-~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 ----------SEEVADILDEKFDI-ATRTGLHCAPLAHKTIGTFATGTIRLSLG-YFNTEEEIEKLLEALSE 375 (376)
T ss_pred ----------HHHHHHHHhccCCE-EEEcccccchHHHHHhCCCCCCeEEEecC-CCCCHHHHHHHHHHHhh
Confidence 12567777776 64 3322110 012358999985 99999999999999976
No 38
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.90 E-value=3e-21 Score=207.61 Aligned_cols=317 Identities=17% Similarity=0.199 Sum_probs=222.2
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
.+..+.....+-+++.+.+++++|.+. .+.+|++++|.++..++...+... .+...|+++...|+|..
T Consensus 34 ~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~-----------~~g~~vl~~~~~~~s~~ 102 (371)
T PF00266_consen 34 VSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPL-----------KPGDEVLVTSNEHPSNR 102 (371)
T ss_dssp SSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHG-----------TTTCEEEEEESSHHHHH
T ss_pred ccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhhhhhhcccccc-----------ccccccccccccccccc
Confidence 344566667777899999999999998 788999999998776666654431 13446778889999866
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEE
Q psy1785 327 ----KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADS 402 (629)
Q Consensus 327 ----kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lh 402 (629)
..++..|+ +|+.|+.+.++.+|+++++++|.. .+.+|..++..+.+|.+.|+++|.++||++|++++
T Consensus 103 ~~~~~~~~~~g~---~v~~i~~~~~~~~~~~~~~~~l~~------~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~ 173 (371)
T PF00266_consen 103 YPWEEIAKRKGA---EVRVIPADPGGSLDLEDLEEALNP------DTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLV 173 (371)
T ss_dssp HHHHHHHHHTTE---EEEEEEEGTTSSCSHHHHHHHHHT------TESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEE
T ss_pred cccccccccchh---hhccccccccchhhhhhhhhhhcc------ccceEEeecccccccEEeeeceehhhhhccCCcee
Confidence 44456788 999999999999999999999953 46789999999999999999999999999999999
Q ss_pred E-e-cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcC-CC
Q psy1785 403 V-T-WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKF-YD 479 (629)
Q Consensus 403 V-A-~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~-~~ 479 (629)
| + .+.+.... ... +.|+|.+++++|| +++|.|+|+++++++ ...+........-...... ..
T Consensus 174 vD~~~~~g~~~i---------d~~----~~~~D~~~~s~~K-l~gp~G~g~l~v~~~-~~~~~~p~~~~~~~~~~~~~~~ 238 (371)
T PF00266_consen 174 VDAAQSAGCVPI---------DLD----ELGADFLVFSSHK-LGGPPGLGFLYVRPE-AIERLRPAKPGGGYLDFPSLQE 238 (371)
T ss_dssp EE-TTTTTTSS-----------TT----TTTESEEEEESTS-TTSSSTEEEEEEEHH-HHHHHHTSSSSSSTTTHHHHHH
T ss_pred Eechhccccccc---------ccc----ccccceeeecccc-cCCCCchhhheehhh-hhhccccccccccccccccchh
Confidence 9 3 33333221 122 2369999999999 888999999999995 3433311111110000000 00
Q ss_pred cccCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc---CCCceEEEEEeeC
Q psy1785 480 TKYDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD---EPECTNISFWYIP 554 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~---~p~~~~v~F~~~p 554 (629)
..+......++.|... ..+.+..+++.+...|++++.++..++++++.+.|.++++++++.+ ....++++|.+..
T Consensus 239 ~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 318 (371)
T PF00266_consen 239 YGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPG 318 (371)
T ss_dssp HCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETT
T ss_pred cccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecC
Confidence 0001111223333332 3566677888887889999999999999999999999999988652 2346788888732
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCC--------ccceEEEeecCCCCCHHHHHHH
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHA--------LPNFFRLVLQNSALDHSDMDYF 618 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~--------~~~~lR~~~~n~~~t~edid~l 618 (629)
.. ...+.+.|.++|.. ++...... ..+++|+++. +++|++|||+|
T Consensus 319 ~~-----------------~~~~~~~L~~~~I~-~~~G~~~~~~~~~~~~~~~~iRvS~~-~~nt~~dv~~l 371 (371)
T PF00266_consen 319 SD-----------------ADDVVKYLEERGIA-VSTGSACAGPSLDILGMGGVIRVSLH-YYNTEEDVDRL 371 (371)
T ss_dssp SS-----------------HHHHHHHHHHHTEE-EEESTTTCHHHHHHHHTTTEEEEE-G-TTSSHHHHHHH
T ss_pred CC-----------------HHHHHHHHhhcCEE-EeccCcccHHHHHHhCCCCEEEEecc-CCCCHHHHhhC
Confidence 11 13567788888754 34322111 1258999985 99999999986
No 39
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.90 E-value=1.9e-21 Score=211.51 Aligned_cols=308 Identities=17% Similarity=0.254 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH---c
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF---E 332 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~---l 332 (629)
....+++.+.+++++|.+..+.+|++|+|+++..++........ .+...|+++..+|.|+..++.. .
T Consensus 46 ~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----------~~g~~Vi~~~~~h~s~~~~~~~~~~~ 115 (402)
T TIGR02006 46 EEAVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYK----------SKGNHIITSKTEHKAVLDTCRYLERE 115 (402)
T ss_pred HHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhc----------CCCCEEEECCCccHHHHHHHHHHHhc
Confidence 34556778889999999877899999999998887765543110 1344678888999998876543 4
Q ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccc
Q psy1785 333 GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKL 410 (629)
Q Consensus 333 Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l 410 (629)
|+ +++.|+++++|.+|+++|+++|.+ .+.+|+.++.++.+|.+.|+++|.++|+++|++++| +.+.+.+
T Consensus 116 g~---~v~~v~~~~~~~~d~~~l~~~l~~------~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~ 186 (402)
T TIGR02006 116 GF---EVTYLPPKSNGLIDLEELKAAIRD------DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKI 186 (402)
T ss_pred CC---EEEEEccCCCCcCCHHHHHHhcCC------CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCc
Confidence 77 999999999999999999988753 256788889999999999999999999999999999 5544333
Q ss_pred ccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCC
Q psy1785 411 LTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 490 (629)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 490 (629)
..+ .. +.++|++++++||+++ |.|+|+++++++.... . .+ .+..... ...++
T Consensus 187 ~~~---------~~----~~~~D~~~~s~~K~~g-p~G~G~l~~~~~~~~~-~---~~-~~~g~~~---------~~~~~ 238 (402)
T TIGR02006 187 PIN---------VN----ELKVDLMSISGHKIYG-PKGIGALYVRRKPRVR-L---EA-LIHGGGH---------ERGMR 238 (402)
T ss_pred ccC---------cc----ccCCCEEEEehhhhcC-CCceEEEEEccCCCCC-C---Cc-eecCCCc---------cCCcc
Confidence 221 11 2369999999999764 9999999999753221 1 11 1111000 00112
Q ss_pred CCCC-c-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCc---eEEEEEeeCCCCCCCCchh
Q psy1785 491 CGRK-P-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPEC---TNISFWYIPPSLRGKEDQA 564 (629)
Q Consensus 491 ~sr~-~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~---~~v~F~~~p~~~~~~~~~~ 564 (629)
.+.. . ..+.+..+++.+ .++++++.++..++++++.+.|+++++++++.+ ++.. .+|+|...+ ..
T Consensus 239 ~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~--------~~ 309 (402)
T TIGR02006 239 SGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE--------GE 309 (402)
T ss_pred CCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcC--------HH
Confidence 2222 2 344455566654 357888899999999999999999999988752 1122 246665321 11
Q ss_pred hHHHHHhhHHHHHHHHHHhcCcEEEeee-----ec-----C--CccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 565 DFNELLHKVAPKIKERMMKSGSMMITYQ-----PI-----H--ALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 565 ~~~~~l~~~~~~i~~~l~~~G~~~i~~~-----~~-----~--~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
++ ...+.+.....|..+.+.. .+ . ....++|+++. +++|++|||++++.|+++.+
T Consensus 310 ~~-------~~~l~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~-~~~t~edid~l~~~l~~~~~ 376 (402)
T TIGR02006 310 SL-------IMALKDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIG-RFTTEEEIDYAVKLVKSAID 376 (402)
T ss_pred HH-------HHhcCCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHHHH
Confidence 11 1111111222333221100 00 0 01258999995 99999999999999988764
No 40
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.90 E-value=2.8e-21 Score=209.08 Aligned_cols=303 Identities=16% Similarity=0.163 Sum_probs=206.6
Q ss_pred cCCCCCCCCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHH-------hcCCCc----cc--cccChhH
Q psy1785 189 LGFNAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLAD-------ALNPSV----YT--YEVSPVF 255 (629)
Q Consensus 189 ~~lp~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~-------~~n~~~----~~--~~~~p~~ 255 (629)
..+|+.|.+++.|...+.++..-. |-+|.+.+.-|---.-+.+.++.. ....++ .+ ...++..
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~~----~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gss~~ 103 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVMD----TNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGSSLL 103 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcCC----cCCCccccCcCcccceeechhhhhcccceecCCCCcccccccCccccCccHH
Confidence 479999999999999988875322 112221111111101111111111 000111 11 1235667
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCeEEeCCch-hhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC
Q psy1785 256 SLMEEHVLAQMRTIVGFQG-GDGIFCPGGS-MANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG 333 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT-~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG 333 (629)
..++.+...++++++|.+. ..+++++++| +++.+++.+++.+.. ..+.|| ++..+|+|+.|++.++|
T Consensus 104 ~~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~----------~gd~VI-~p~~th~S~~kAi~~~G 172 (444)
T TIGR03531 104 YKLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRP----------KAKYVI-WPRIDQKSCIKAISTAG 172 (444)
T ss_pred HHHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCC----------CCCEEE-EECcChHHHHHHHHHcC
Confidence 8899999999999999985 3588999999 677777776653210 123444 55567999999999999
Q ss_pred CCCCCEEEEec---CCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 334 LGSDNVYLIKT---DARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 334 lg~~~v~~V~~---d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
+ +++.|++ ++++.||+++|+++|.+.. ....++|+.+.+++..|..||+++|+++|++||+|+|| ||+.+
T Consensus 173 ~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~--~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~ 247 (444)
T TIGR03531 173 F---EPRVIETVLDGDELTTDVEDIERAIEEIG--PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQ 247 (444)
T ss_pred C---eEEEeeeeecCcCCCcCHHHHHHHHHhcc--CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCc
Confidence 9 8999995 3568999999999998421 13455566666666677999999999999999999999 88863
Q ss_pred ccccccccccccccccccccCCc-ceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVV-ADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~g-aDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
..... ..-..+++.| +|++++++||++.+|.++|+++++++++.+.... .|...
T Consensus 248 ~~~~~--------~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~---~y~g~-------------- 302 (444)
T TIGR03531 248 SNKYM--------ELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEISK---SYPGR-------------- 302 (444)
T ss_pred Chhhh--------hhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHHHH---hccCC--------------
Confidence 31111 0000022222 8999999999999999999999988877654321 12100
Q ss_pred cCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC---CcEEEc
Q psy1785 488 HIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP---GFKLVL 540 (629)
Q Consensus 488 ~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~---g~~l~~ 540 (629)
.....++++|+.+..+|.+|+++++++..++++++.+.|.++. |.+++.
T Consensus 303 ----~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~ 354 (444)
T TIGR03531 303 ----ASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLD 354 (444)
T ss_pred ----CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeec
Confidence 0113578999999999999999999999999999999998753 566664
No 41
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.89 E-value=3.9e-20 Score=202.61 Aligned_cols=353 Identities=13% Similarity=0.124 Sum_probs=231.8
Q ss_pred CccccccCCCCChHHHHHHHHHHhc---CCCc--cccccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHH
Q psy1785 218 PYFVNQLFSSVDPYGLVGQWLADAL---NPSV--YTYEVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAI 291 (629)
Q Consensus 218 p~~~g~~~s~~~~~~~~~~~lt~~~---n~~~--~~~~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al 291 (629)
..|+++-.++..+-.+. +.+..++ +.+. ..+..++.......++++.+++++|.+. .+.+|++|+|+++..++
T Consensus 33 ~iyLd~a~~~~~p~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~ 111 (424)
T PLN02855 33 LVYLDNAATSQKPAAVL-DALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATEAINLVA 111 (424)
T ss_pred eEEeeCccccCCCHHHH-HHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHH
Confidence 45677655554443333 3333332 1122 1112233344455778899999999964 68999999999876555
Q ss_pred HHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH----HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCC
Q psy1785 292 SCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI----KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGA 367 (629)
Q Consensus 292 ~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si----~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~ 367 (629)
........ .|...|+++...|+|. ...++..|+ +++.|+++.++.+|+++|++.|..
T Consensus 112 ~~~~~~~~----------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~~~~~~~~l~~~i~~------ 172 (424)
T PLN02855 112 YTWGLANL----------KPGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPDEVLDVEQLKELLSE------ 172 (424)
T ss_pred HHhhhhcC----------CCcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCCCCcCHHHHHHHhcc------
Confidence 43111000 1344677888888763 445677788 999999988888999999998854
Q ss_pred CcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCC
Q psy1785 368 VPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA 445 (629)
Q Consensus 368 ~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~ 445 (629)
.+.+|+.++.++.+|.+.|+++|.++|+++|++++| +++...... ... +.++|.+++++||+ ++
T Consensus 173 ~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~---------~~~----~~~~d~~~~s~~K~-~g 238 (424)
T PLN02855 173 KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPV---------DVQ----TLGADFLVASSHKM-CG 238 (424)
T ss_pred CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCC---------Cch----hcCCCEEEeecccc-cC
Confidence 356788899999999999999999999999999999 553322111 111 23589999999995 45
Q ss_pred CCccEEEEEeccchhhhhhcCCCCccccCCc---CCCcc--cCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHH
Q psy1785 446 PQQCSVFLTRHQSVLTECHSASASYLFQKDK---FYDTK--YDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDK 518 (629)
Q Consensus 446 P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~---~~~~~--~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~ 518 (629)
|.|+|+++++++ .+... .+++..... .+... +......++.|.+. ..+.++.+++.+...|++++.++
T Consensus 239 p~G~G~l~~~~~-~~~~~----~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 313 (424)
T PLN02855 239 PTGIGFLWGKSD-LLESM----PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEY 313 (424)
T ss_pred CCccEEEEEchh-hhhcC----CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHH
Confidence 889999999864 33322 122211110 00000 00001112333232 46677788887777799999999
Q ss_pred HHHHHHHHHHHHhcCCCcEEEccC-----CCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhc-CcEEEeee
Q psy1785 519 SFDNAKYFTDKIRHRPGFKLVLDE-----PECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKS-GSMMITYQ 592 (629)
Q Consensus 519 ~~~la~~l~~~L~~~~g~~l~~~~-----p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~ 592 (629)
..++++++++.|+++++++++.+. ...++++|.+.. .. ..++.+.|.++ |.. +...
T Consensus 314 ~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~--~~---------------~~~v~~~L~~~~gI~-v~~g 375 (424)
T PLN02855 314 EVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEG--IH---------------PTDLSTFLDQQHGVA-IRSG 375 (424)
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECC--cC---------------HHHHHHHhcccCCEE-Eech
Confidence 999999999999999999998621 234688887532 11 12466677666 643 3321
Q ss_pred e--------cCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 593 P--------IHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 593 ~--------~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
. ..+...++|+++. +++|++|||+++++|+++.++
T Consensus 376 ~~c~~~~~~~~g~~~~iRiS~~-~ynt~~di~~l~~~l~~~~~~ 418 (424)
T PLN02855 376 HHCAQPLHRYLGVNASARASLY-FYNTKEEVDAFIHALKDTIAF 418 (424)
T ss_pred hhhhHHHHHHhCCCCeEEEEec-cCCCHHHHHHHHHHHHHHHHH
Confidence 1 0122357999995 999999999999999988654
No 42
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.88 E-value=3.3e-20 Score=201.24 Aligned_cols=316 Identities=16% Similarity=0.142 Sum_probs=207.2
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
.+....+..++.+++++++|.+.....++.+|+.+...++..++... .+...|+++...|.+...+...
T Consensus 59 ~~g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~-----------~~gd~Vl~~~~~h~~~~~~~~~ 127 (398)
T cd00613 59 SQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAY-----------HKRNKVLVPDSAHPTNPAVART 127 (398)
T ss_pred hhhHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcc-----------cCCCEEEEcCccCcchHHHHHH
Confidence 45566777889999999999876567788867765555555554320 0244677889999999888888
Q ss_pred cC----CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH-HHHHHHHHHcCCeEEE--e
Q psy1785 332 EG----LGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI-PAIADICAEYDMADSV--T 404 (629)
Q Consensus 332 lG----lg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl-~ei~~i~~~~~~~lhV--A 404 (629)
+| . +++.||+++++.+|+++|++++.+ .+..|+++..+ .+|.+.|+ ++|+++|+++|+|+++ +
T Consensus 128 ~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~------~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~ 197 (398)
T cd00613 128 RGEPLGI---EVVEVPSDEGGTVDLEALKEEVSE------EVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGD 197 (398)
T ss_pred hcccCCc---EEEEeccCCCCCcCHHHHHHhcCC------CeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEec
Confidence 87 6 899999988889999999988743 35567777765 67999885 9999999999999999 4
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-----cEEEEEeccchhhhhhcCCCCccccC----C
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-----CSVFLTRHQSVLTECHSASASYLFQK----D 475 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-----~g~ll~r~~~~l~~~~~~~~~yl~~~----~ 475 (629)
++....+.. .. ..++|+++.++|||+ .|.+ +|++++++ .+.... .....+.... .
T Consensus 198 ~~~~~~~~~---------~~----~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~-~~~~~~-~~~~~~~~~~~~~~~ 261 (398)
T cd00613 198 NLNLTGLKP---------PG----EYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKK-ELVRFL-PGRLVGVTKDAEGNR 261 (398)
T ss_pred cccccCCCC---------hH----HcCCCEEEeeccccC-CCCCCCCCceeEEEEhh-hhHhhC-CCCeeccccccCCCc
Confidence 332222221 01 225999999999999 7743 56777765 333321 1100000000 0
Q ss_pred cCCC--------cccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceE
Q psy1785 476 KFYD--------TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTN 547 (629)
Q Consensus 476 ~~~~--------~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~ 547 (629)
..+. ..++.+...+..+....+..+|.++..++.+|++++.++..+++++++++|+++++..... .+....
T Consensus 262 ~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~ 340 (398)
T cd00613 262 AFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFN-GPFFHE 340 (398)
T ss_pred ceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCeeEE
Confidence 0000 0000011111111122456778888888999999999999999999999999986554222 355666
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHH
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEI 622 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i 622 (629)
++|++.+. .+ ....++.++|.++|..... ..+.+ .+.+|+++ +.++|++|||++++.|
T Consensus 341 v~~~~~~~--~~------------~~~~~~~~~L~~~gi~~~~-~~~~~-~~~lRis~-~~~~t~edid~~~~~L 398 (398)
T cd00613 341 FVLRLPPL--YG------------IRAEDLAKALIDGGFHAPT-MYLPV-DGTLMIEP-TETETKEELDALLEAL 398 (398)
T ss_pred EEEEcCCc--ch------------HHHHHHHHhhhhcCccccc-cccCC-CCeEEEEc-CCCCCHHHHHHHHHhC
Confidence 77765321 00 0113567788888864321 11122 35899999 4999999999999864
No 43
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.87 E-value=8.9e-20 Score=194.92 Aligned_cols=318 Identities=15% Similarity=0.129 Sum_probs=216.0
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH--HHH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS--IKK 327 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S--i~k 327 (629)
.++....+.+++.+.+++++|.+.. ..+++.+||+++..++.+... |...|++....|++ +..
T Consensus 26 ~~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~--------------~g~~vl~~~~~~~~~~~~~ 91 (356)
T cd06451 26 RSPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLE--------------PGDKVLVGVNGVFGDRWAD 91 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCC--------------CCCEEEEecCCchhHHHHH
Confidence 3566777788999999999999653 477899999987766654311 23345566677876 456
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.++..|. +++.+|+++++.+|+++|++.+.+ ..+.+|..++..+.+|.+.|+++|.++|+++|+++++ ++
T Consensus 92 ~~~~~g~---~~~~v~~~~~~~~~~~~l~~~i~~-----~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~ 163 (356)
T cd06451 92 MAERYGA---DVDVVEKPWGEAVSPEEIAEALEQ-----HDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVS 163 (356)
T ss_pred HHHHhCC---CeEEeecCCCCCCCHHHHHHHHhc-----cCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeeh
Confidence 7788898 999999998889999999998864 1355777788889999999999999999999999999 33
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhc--CCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHS--ASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~--~~~~yl~~~~~~~~~~~~ 483 (629)
..+.... ... +.++|.++.++|||++.|.++|+++++++ +...... ....+...... ...
T Consensus 164 ~~g~~~~---------~~~----~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~ 225 (356)
T cd06451 164 SLGGEPF---------RMD----EWGVDVAYTGSQKALGAPPGLGPIAFSER-ALERIKKKTKPKGFYFDLLL----LLK 225 (356)
T ss_pred hccCccc---------ccc----ccCccEEEecCchhccCCCCcceeEECHH-HHHHHHhcCCCCceeecHHH----HHh
Confidence 3211111 111 22589999999999999999999999874 4433321 11111110000 000
Q ss_pred CCCcc-CCCCCC-c-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC-CCceEEEEEeeCCCCCC
Q psy1785 484 SGDKH-IQCGRK-P-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE-PECTNISFWYIPPSLRG 559 (629)
Q Consensus 484 ~~~~~-~~~sr~-~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~-p~~~~v~F~~~p~~~~~ 559 (629)
+.... ...+.. . ....++.+++.+...|++++.++..++++++.+.|+++ |++++.++ ...+.++|-..|++..
T Consensus 226 ~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~- 303 (356)
T cd06451 226 YWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLVPEGVD- 303 (356)
T ss_pred hhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEECCCCCC-
Confidence 00000 111111 1 24566777777778899999999999999999999987 89887521 2244443322232211
Q ss_pred CCchhhHHHHHhhHHHHHHHHHHhc-CcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 560 KEDQADFNELLHKVAPKIKERMMKS-GSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 560 ~~~~~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
...+.++|.++ |........ ...+++||++++ +.+|++||+++++.|+++.
T Consensus 304 --------------~~~~~~~L~~~~gI~~~~g~~-~~~~~~iRis~~-~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 304 --------------GDEVVRRLMKRYNIEIAGGLG-PTAGKVFRIGHM-GEATREDVLGVLSALEEAL 355 (356)
T ss_pred --------------HHHHHHHHHHhCCEEEecccc-cccCCEEEEecC-CCCCHHHHHHHHHHHHHHh
Confidence 13567788888 864432211 122358999996 8899999999999998864
No 44
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.87 E-value=1.7e-19 Score=196.35 Aligned_cols=306 Identities=13% Similarity=0.100 Sum_probs=204.3
Q ss_pred HHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH----HHHHcCCCCCCE-
Q psy1785 265 QMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK----LAAFEGLGSDNV- 339 (629)
Q Consensus 265 ~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k----aa~~lGlg~~~v- 339 (629)
.+ +++|.+..+.+|++|+|+++..++...... | .+..+|+++...|.|... .++..|+ ++
T Consensus 78 ~~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~--------~---~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~ 142 (406)
T TIGR01814 78 KL-RLVGAKEDEVVVMNTLTINLHLLLASFYKP--------T---PKRYKILLEAKAFPSDHYAIESQLQLHGL---TVE 142 (406)
T ss_pred cc-cccCCCCCcEEEeCCchHHHHHHHHHhcCC--------c---CCccEEEecCCCCChHHHHHHHHHHhcCC---Ccc
Confidence 35 899998888999999999876665543111 1 123367788899988444 4456677 65
Q ss_pred ---EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 340 ---YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ---~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+.++.+++|.+|++++++.+... ...+.+|+.++.++.+|.+.|+++|+++|+++|++++| +.+.+.....
T Consensus 143 ~~~~~~~~~~~g~~~~~~l~~~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id- 218 (406)
T TIGR01814 143 ESMVQIEPREEETLRLEDILDTIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLD- 218 (406)
T ss_pred cceEEeccCCCCccCHHHHHHHHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccc-
Confidence 57777778899999999988642 23567899999999999999999999999999999999 4444433221
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcC-CC--cccCCCCccCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKF-YD--TKYDSGDKHIQC 491 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~-~~--~~~~~~~~~~~~ 491 (629)
.. +.|+|.+++++||||++|.| |+++++.+... ........+....... ++ ..+......++.
T Consensus 219 --------~~----~~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (406)
T TIGR01814 219 --------LH----DWGVDFACWCTYKYLNAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRI 284 (406)
T ss_pred --------cc----cCCCCEEEEcCccccCCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceee
Confidence 11 23699999999999977778 66776554321 1111111111111000 00 000111112223
Q ss_pred CCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEcc-CC--CceEEEEEeeCCCCCCCCc
Q psy1785 492 GRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLD-EP--ECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 492 sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~-~p--~~~~v~F~~~p~~~~~~~~ 562 (629)
|.+. ..+.+-.+++.+...|++++.++..++++++++.|++. ++++++.+ ++ ..++++|.+. . .
T Consensus 285 GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~--~---- 357 (406)
T TIGR01814 285 SNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-V--P---- 357 (406)
T ss_pred CCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-C--C----
Confidence 3222 44556667777777899999999999999999999875 46988862 11 2457888753 1 1
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
...+.++|.++|.+ +.. .+ .+.+|+++++.++|++|||++++.|+++.
T Consensus 358 -----------~~~~~~~L~~~gi~-v~~---~~-~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 358 -----------GKAVFQALIKRGVI-GDK---RE-PSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred -----------HHHHHHHHHHCCEE-Eec---cC-CCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 12567778788853 331 12 24899999657999999999999998764
No 45
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.87 E-value=1.4e-19 Score=195.88 Aligned_cols=310 Identities=16% Similarity=0.221 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
..++.+.+++++|.+ ...+++|+|++|..++..... |...|+++...|++...++...|+ +
T Consensus 65 ~~~l~~~lA~~~g~~--~~~~~~g~t~a~~~al~~l~~--------------~gd~Vlv~~~~h~s~~~~~~~~G~---~ 125 (387)
T PRK09331 65 IADFHEDLAEFLGMD--EARVTHGAREGKFAVMHSLCK--------------KGDYVVLDGLAHYTSYVAAERAGL---N 125 (387)
T ss_pred HHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHhcC--------------CCCEEEECCCchHHHHHHHHHcCC---E
Confidence 466677799999986 478999999998877765421 344678889999999999999998 9
Q ss_pred EEEEec--CCCCCCCHHHHHHHHHHHHh-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 339 VYLIKT--DARGRMLPESLRGEIQRTLA-EGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 339 v~~V~~--d~~g~~d~~~Le~~i~~~~~-~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
++.+|+ ++++.+|+++|+++|.+..+ .+..+.+|+.+..++.+|.+.|+++|+++|+++|++++| +++.+.+...
T Consensus 126 ~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~ 205 (387)
T PRK09331 126 VREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVD 205 (387)
T ss_pred EEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCC
Confidence 999999 77899999999999976422 223567888888889999999999999999999999999 6665443222
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC-
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG- 492 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s- 492 (629)
. .+.|+|.++.++||++++|.+.|++++++ +.+.........|...... .+.++
T Consensus 206 ---------~----~~~g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~~~~~~~~~~~~~~~~-----------~~~~~~ 260 (387)
T PRK09331 206 ---------G----KKLGADFIVGSGHKSMAASAPSGVLATTE-EYADKVFRTSRKFGVKEVE-----------LLGCTL 260 (387)
T ss_pred ---------H----HHcCCCEEEeeCcccccCCCCEEEEEECH-HHHhhcccccCCCccccee-----------eeceec
Confidence 1 12369999999999999999999988865 4444432222222211100 01122
Q ss_pred CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC-CceEEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 493 RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP-ECTNISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p-~~~~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
+...++.++.++..+-. - .++.++..++++++++.|++++|++++.+++ ..++++|.. | .... ......
T Consensus 261 ~~~~~~~~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~-~-~~~~------~~~~~~ 330 (387)
T PRK09331 261 RGAPLVTLMASFPHVVE-R-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFET-P-SFDE------IAKKHK 330 (387)
T ss_pred CchHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeC-C-chhH------Hhhhcc
Confidence 22345555555544321 1 2356677889999999999999999985212 334445543 2 2100 000001
Q ss_pred hHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 572 KVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 572 ~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
....++.+.|.++|...+. .+...++|+..+ ..|++|+++++++|+++.++
T Consensus 331 ~~~~~~~~~L~~~gI~~~~----~~~~~i~ri~~~--g~t~~di~~l~~aL~~i~~~ 381 (387)
T PRK09331 331 RRGFFLYEELKKRGIHGIK----PGATKEFKLSTY--GLTWEQVEYVADAFKEIAEK 381 (387)
T ss_pred ccchhHHHHHHHcCceEEc----cCCceEEEEEec--cCCHHHHHHHHHHHHHHHHh
Confidence 1123578888888864221 223346776663 47999999999999987654
No 46
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.87 E-value=2.4e-20 Score=213.26 Aligned_cols=360 Identities=12% Similarity=0.074 Sum_probs=245.5
Q ss_pred HHHHHHhhccCCCCCCCCHHHHHHHHHHHhcccccC----CCCccccccCCCC-ChHHHHHHHHHHhcCCCccccccChh
Q psy1785 180 PEELEKKLELGFNAGPSSHAKLIDLMKTVIQYSVKT----GHPYFVNQLFSSV-DPYGLVGQWLADALNPSVYTYEVSPV 254 (629)
Q Consensus 180 ~~~l~~~~~~~lp~~~~~~~~il~~l~~~~~~~~~~----~~p~~~g~~~s~~-~~~~~~~~~lt~~~n~~~~~~~~~p~ 254 (629)
|+.++..-++++|+ +.+|.++++.++++...+... +.+.|..++|+.. ..+.-..+|+|+|+ +|+.|.+++
T Consensus 46 P~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYT---PYQpEisQG 121 (954)
T PRK12566 46 PPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYT---PYQPEIAQG 121 (954)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCC---CCCchhhhH
Confidence 45554333356775 789999999999997766332 3344444556555 55556678999997 899999999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH----HH
Q psy1785 255 FSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL----AA 330 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka----a~ 330 (629)
..+.-.+.+.++++|.|++.++..+.+++|.+...++++.|... + .+-.+++++..|+..... +.
T Consensus 122 ~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~aEA~~ma~~~~~-------~----k~~~~~v~~~~hP~~~~v~~t~~~ 190 (954)
T PRK12566 122 RLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAKRVAK-------S----KSNRFFVDEHCHPQTLSVLRTRAE 190 (954)
T ss_pred HHHHHHHHHHHHHHHhCchhhhhhhccchhHHHHHHHHHHHHhh-------c----CCCEEEECCCCCHHHHHHHHHhhh
Confidence 99999999999999999999999999999987664444433220 0 133578899999874443 34
Q ss_pred HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccc
Q psy1785 331 FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKL 410 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l 410 (629)
.+|+ +++. ++|++.+.+ ..+ .+...-++..|.|.|+.+|.+++|+.|..+.|+.++..+
T Consensus 191 ~~g~---~i~~-----------~~~~~~~~~------~~~-~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~~~d~laL 249 (954)
T PRK12566 191 GFGF---ELVV-----------DAVDNLAAH------AVF-GALLQYPDTHGEIRDLRPLIDQLHGQQALACVAADLLSL 249 (954)
T ss_pred cCCc---EEEE-----------cchhhcCCC------CEE-EEEEECCCCceEEccHHHHHHHHHHcCCEEEEEeCHHHH
Confidence 5565 5543 344443322 233 444455678899999999999999999988774444332
Q ss_pred ccccccccccccccccccCCcceEEEeCCCCCCCCCCc-----cEEEEEecc-------------------chhhhhhcC
Q psy1785 411 LTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-----CSVFLTRHQ-------------------SVLTECHSA 466 (629)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-----~g~ll~r~~-------------------~~l~~~~~~ 466 (629)
..- +.. -++|||+++.+.| -+|+|++ .|+|.+|++ ..++.+++.
T Consensus 250 ~ll--------~~P---ge~GADI~vG~~Q-~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~Lqt 317 (954)
T PRK12566 250 LVL--------TPP---GELGADVVLGSTQ-RFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQT 317 (954)
T ss_pred hCC--------CCh---hhcCCcEEeeCCC-cCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhH
Confidence 110 111 2568999977776 6777776 677888773 111222233
Q ss_pred CCCccccCCcCCCcccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCc
Q psy1785 467 SASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPEC 545 (629)
Q Consensus 467 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~ 545 (629)
+.++|++++.++++ |+.++ .++..-+++-.+|.+|++++.++++.+|+||++.|.+ .|+++.. ++.+
T Consensus 318 REQHIRReKAtSNI----------CT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~-~~fF 385 (954)
T PRK12566 318 REQHIRREKANSNI----------CTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLN-RHFF 385 (954)
T ss_pred HHHHhhhccccchh----------hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCcccc-CCcc
Confidence 34444444333222 44443 3445555667789999999999999999999999999 6999988 7889
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.++++++ ... +.++.++..+.|.-+ ...++ +.+.+++- +.+|.+|++.+++.+.
T Consensus 386 ~~~~v~~-~~~-----------------~~~~~~~a~~~~~n~---r~~~~--~~~~~s~d-e~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 386 DTLTLEV-GGA-----------------QAAIIESAEAARINL---RILGR--GRLGVSLD-ETCDEATVARLFDIFL 439 (954)
T ss_pred ceEEEEc-cCC-----------------HHHHHHHHHHCCCee---EEeCC--CeEEEEeC-CCCCHHHHHHHHHHhc
Confidence 9988876 100 124566666677432 22222 36889994 9999999999999884
No 47
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.87 E-value=3.5e-19 Score=192.35 Aligned_cols=304 Identities=15% Similarity=0.157 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHhCC-CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH---HcCC
Q psy1785 259 EEHVLAQMRTIVGF-QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA---FEGL 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~-~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~---~lGl 334 (629)
.++.+..+.+.+|. +..+.++|+|+|+++..++........ .+ .++..|+++...|+++..... ..|+
T Consensus 44 l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~---~~-----~~~~~vi~~~~e~ps~~~~~~~~~~~G~ 115 (382)
T TIGR03403 44 IAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEI---LK-----GGKNHIITTEVEHPAVRATCAFLESLGV 115 (382)
T ss_pred HHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhc---cc-----CCCCEEEEcCCccHHHHHHHHHHHHCCC
Confidence 34555566667776 456899999999998877765432110 00 113357888899998776643 4576
Q ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccc
Q psy1785 335 GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLT 412 (629)
Q Consensus 335 g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~ 412 (629)
+++.||++++|.+|+++|++++.+ .+.+|..+..++.+|.+.|+++|.++|+++|++++| +++......
T Consensus 116 ---~v~~v~~~~~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~ 186 (382)
T TIGR03403 116 ---EVTYLPINEQGTITAEQVREAITE------KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPV 186 (382)
T ss_pred ---EEEEEecCCCCCCCHHHHHHhccc------CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCcc
Confidence 999999999999999999988854 245788889999999999999999999999999999 444322211
Q ss_pred ccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 413 APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
+ . .+.++|++++++|||+ +|.|+|++++|+...+ .+ .+..... .. + .. .++
T Consensus 187 ~---------~----~~~~~D~~~~s~~K~~-gp~G~g~l~vr~~~~~------~p-~~~g~~~--~~----~-~~-~gt 237 (382)
T TIGR03403 187 D---------V----QKAGVDFLSFSAHKFH-GPKGVGGLYIRKGVEL------TP-LFHGGEH--MG----G-RR-SGT 237 (382)
T ss_pred C---------c----cccCCCEEEEcchhhC-CCCceEEEEECCCCCC------CC-cccCCCC--CC----C-cc-cCC
Confidence 1 1 1236999999999985 5999999999875311 11 1211100 00 0 00 111
Q ss_pred CCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC-CC-ceEEEEEeeCCCCCCCCchhhHHHH
Q psy1785 493 RKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE-PE-CTNISFWYIPPSLRGKEDQADFNEL 569 (629)
Q Consensus 493 r~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~-p~-~~~v~F~~~p~~~~~~~~~~~~~~~ 569 (629)
-.. ..+.+..+++.. .+++++..++..+++++|.+.|+++++++++.+. +. .++++|.+. +.. .
T Consensus 238 ~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~------ 304 (382)
T TIGR03403 238 LNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK--GVE----G------ 304 (382)
T ss_pred cChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeC--CCC----H------
Confidence 122 233555566544 3457788889999999999999999999988621 12 245566643 111 0
Q ss_pred HhhHHHHHHHHHHhcCcEEEeeee------c--------CC-----ccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 570 LHKVAPKIKERMMKSGSMMITYQP------I--------HA-----LPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 570 l~~~~~~i~~~l~~~G~~~i~~~~------~--------~~-----~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..+...|.++|.. ++... + -+ ....+|++++ +++|++|||+++++|+++.++
T Consensus 305 -----~~~~~~L~~~gI~-v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~~~~ 375 (382)
T TIGR03403 305 -----EAMLWDLNKAGIA-ASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKAVQR 375 (382)
T ss_pred -----HHHHHhhccCCEE-EEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 2345556667643 33210 0 01 1247999996 999999999999999887653
No 48
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=1.3e-19 Score=190.24 Aligned_cols=320 Identities=18% Similarity=0.219 Sum_probs=232.7
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCCCCeEE-eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQGGDGIF-CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~-~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
..+|.+..+-.++++.+..+++.++++..+ +.+||.+...++.....+ | .+.+|+..+.--..+.+.
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~p--------g----dkVLv~~nG~FG~R~~~i 98 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEP--------G----DKVLVVVNGKFGERFAEI 98 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCC--------C----CeEEEEeCChHHHHHHHH
Confidence 568999999999999999999998655544 566666655554433222 2 355666666666779999
Q ss_pred HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE----e
Q psy1785 329 AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV----T 404 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV----A 404 (629)
++..|. +++.+.+.+.-.+|+++++++|++. ....+|..+++.|.+|..+|+++|+++|++||..+.| +
T Consensus 99 a~~~g~---~v~~~~~~wg~~v~p~~v~~~L~~~----~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS 171 (383)
T COG0075 99 AERYGA---EVVVLEVEWGEAVDPEEVEEALDKD----PDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSS 171 (383)
T ss_pred HHHhCC---ceEEEeCCCCCCCCHHHHHHHHhcC----CCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEeccc
Confidence 999999 9999999988899999999999842 2345899999999999999999999999999999999 5
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC-C-CccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS-A-SYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~-~-~yl~~~~~~~~~~~ 482 (629)
+|+..+..+ ++|+|.+....||+|++|.|.|++.++++. +....... + -|+.-... .
T Consensus 172 ~Gg~~~~vd---------------~wgiDv~itgSQK~l~~PPGla~v~~S~~a-~e~~~~~~~~~~ylDL~~~-----~ 230 (383)
T COG0075 172 LGGEPLKVD---------------EWGIDVAITGSQKALGAPPGLAFVAVSERA-LEAIEERKHPSFYLDLKKW-----L 230 (383)
T ss_pred CCCcccchh---------------hcCccEEEecCchhccCCCccceeEECHHH-HHHHhcCCCCceeecHHHH-----H
Confidence 666544322 458999999999999999999999998864 33332222 2 23322110 0
Q ss_pred CCCCc--cCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCC
Q psy1785 483 DSGDK--HIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLR 558 (629)
Q Consensus 483 ~~~~~--~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~ 558 (629)
.+.+. ....+-+. ..+++-.+++.+-.+|++++++|+.++++++++.+++. ||+++.+ +..+++|+--+.|.+.+
T Consensus 231 ~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~~ 309 (383)
T COG0075 231 KYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGVD 309 (383)
T ss_pred HHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCCC
Confidence 11100 01111111 46777888999999999999999999999999999998 9999872 23454555445565543
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeee--ecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQ--PIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~--~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+ +++..++.+++.+.++.. ++.| ..||+..| -..+.+|+.+.+.+|+....+
T Consensus 310 ~---------------~~~~~~~~~~~g~~i~gg~~~l~g--kifRIGhM-G~~~~~dv~~~l~ale~~L~~ 363 (383)
T COG0075 310 D---------------KKVRRALLKEYGVEIAGGQGPLKG--KIFRIGHM-GNVRPEDVLAALAALEAALRE 363 (383)
T ss_pred c---------------HHHHHHHHHhCCEEecccccccCc--cEEEEecC-ccCCHHHHHHHHHHHHHHHHH
Confidence 2 133446666644555532 3334 48999999 599999999999999887654
No 49
>PRK02948 cysteine desulfurase; Provisional
Probab=99.86 E-value=2.8e-19 Score=192.98 Aligned_cols=308 Identities=17% Similarity=0.187 Sum_probs=208.8
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH-
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA- 329 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa- 329 (629)
.+.....+..++.+.+++++|.+..+.++++|+|+++..++........ .+..+|+++...|+|+....
T Consensus 37 ~~~~~~~~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~----------~~g~~vv~~~~~h~s~~~~~~ 106 (381)
T PRK02948 37 IGGTASSLLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALP----------QNKKHIITTPMEHASIHSYFQ 106 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcc----------CCCCEEEECCcccHHHHHHHH
Confidence 3444556678889999999999888899999999998887766543210 13456888999999877654
Q ss_pred --HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-e-c
Q psy1785 330 --AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-T-W 405 (629)
Q Consensus 330 --~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A-~ 405 (629)
+..|. +++.||++++|.+|+++|++++.+ .+.+|+.+..++.+|.+.|+++|.++|+++|++++| + .
T Consensus 107 ~~~~~g~---~v~~v~~~~~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~ 177 (381)
T PRK02948 107 SLESQGY---TVTEIPVDKSGLIRLVDLERAITP------DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQ 177 (381)
T ss_pred HHHhCCC---EEEEEeeCCCCCCCHHHHHHhcCC------CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChh
Confidence 44576 999999998899999999988753 356888999999999999999999999999999999 3 2
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSG 485 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 485 (629)
....... ... +.++|+++.++||+++ |.|+|+++++++..+.. .......
T Consensus 178 ~~g~~~~---------~~~----~~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~~-------~~~~~~~--------- 227 (381)
T PRK02948 178 TFGKLPI---------DVF----EMGIDSLSVSAHKIYG-PKGVGAVYINPQVRWKP-------VFPGTTH--------- 227 (381)
T ss_pred hcccccc---------Ccc----cCCCCEEEecHHhcCC-CCcEEEEEEcCCCCCCC-------cccCCCC---------
Confidence 2221111 111 2359999999999865 88999999876421111 0000000
Q ss_pred CccCCCCC-C-cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC---CCc-eEEEEEeeCCCCCC
Q psy1785 486 DKHIQCGR-K-PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE---PEC-TNISFWYIPPSLRG 559 (629)
Q Consensus 486 ~~~~~~sr-~-~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~---p~~-~~v~F~~~p~~~~~ 559 (629)
...++.+. . ...+.+..+++.. .+++++..++..++++++.+.|++. ++++.... +.. .+++|.... ..+
T Consensus 228 ~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~--~~~ 303 (381)
T PRK02948 228 EKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKG--IEG 303 (381)
T ss_pred CCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCC--CCH
Confidence 00111111 1 1334444555543 2467888899999999999999988 66554311 122 355665421 110
Q ss_pred CCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee-----c--------------CCccceEEEeecCCCCCHHHHHHHHH
Q psy1785 560 KEDQADFNELLHKVAPKIKERMMKSGSMMITYQP-----I--------------HALPNFFRLVLQNSALDHSDMDYFID 620 (629)
Q Consensus 560 ~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~-----~--------------~~~~~~lR~~~~n~~~t~edid~l~~ 620 (629)
.++...|.++|.. +.... + ....+++|++++ .++|++|||++++
T Consensus 304 ---------------~~~~~~l~~~gI~-v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~ 366 (381)
T PRK02948 304 ---------------QYTMLECNRRGIA-ISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIH 366 (381)
T ss_pred ---------------HHHHHhcccCCEE-EEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHH
Confidence 2345567677754 33211 0 001258999996 9999999999999
Q ss_pred HHHHHhhc
Q psy1785 621 EIERLGHD 628 (629)
Q Consensus 621 ~i~~l~~~ 628 (629)
.|+++.+.
T Consensus 367 ~l~~~~~~ 374 (381)
T PRK02948 367 ALETIGNQ 374 (381)
T ss_pred HHHHHHHH
Confidence 99987653
No 50
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.86 E-value=5.8e-19 Score=191.52 Aligned_cols=305 Identities=13% Similarity=0.137 Sum_probs=205.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH----HHH
Q psy1785 254 VFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK----KLA 329 (629)
Q Consensus 254 ~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~----kaa 329 (629)
....+..++.+.+++++|.+..+.++++|+|+++..++.+..... .|...|+++...|+|.. ..+
T Consensus 57 ~~~~~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~-----------~~gd~vl~~~~~~~s~~~~~~~~~ 125 (397)
T TIGR01976 57 RADQVVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRW-----------GPGDEVIVTRLDHEANISPWLQAA 125 (397)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcC-----------CCCCEEEEcCCchHhHHHHHHHHH
Confidence 344566788899999999987778899999887654443322110 24456778888888754 556
Q ss_pred HHcCCCCCCEEEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecC
Q psy1785 330 AFEGLGSDNVYLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWN 406 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~g 406 (629)
+..|+ +++.++.++ ++.+|+++|+++|.+ .+.+|+.+..++.+|.+.|+++|.++|+++|++++| ++.
T Consensus 126 ~~~g~---~~~~~~~~~~~~~~~~~~l~~~i~~------~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~ 196 (397)
T TIGR01976 126 ERAGA---KVKWARVDEATGELHPDDLASLLSP------RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHY 196 (397)
T ss_pred HhcCC---EEEEEeccccCCCcCHHHHHHhcCC------CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhh
Confidence 77888 999999986 789999999998853 356788889999999999999999999999999999 432
Q ss_pred ccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCC
Q psy1785 407 PHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 407 g~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 486 (629)
...... ... +.++|.+++++|||++ |. +|+++++++ .+.........+... ...
T Consensus 197 ~~~~~~---------~~~----~~~~d~~~~s~~K~~g-~~-~G~l~~~~~-~~~~l~~~~~~~~~~----------~~~ 250 (397)
T TIGR01976 197 APHGLI---------DVQ----ATGADFLTCSAYKFFG-PH-MGILWGRPE-LLMNLPPYKLTFSYD----------TGP 250 (397)
T ss_pred ccccCC---------CHH----HcCCCEEEEechhhcC-Cc-eEEEEEcHH-HHhhCCCccccCccC----------CCc
Confidence 221111 111 2359999999999986 43 788888764 433221111111111 111
Q ss_pred ccCCCCCC-c-chHHHHHHHHhcChh--------------hHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc---CCCceE
Q psy1785 487 KHIQCGRK-P-DVLKFWFMWKAKGTD--------------GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD---EPECTN 547 (629)
Q Consensus 487 ~~~~~sr~-~-~al~~w~~l~~~G~~--------------G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~---~p~~~~ 547 (629)
..++.|.+ . .++.++.+++.+... ++++..++..++++++++.|+++++++++.+ .+..++
T Consensus 251 ~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~ 330 (397)
T TIGR01976 251 ERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPT 330 (397)
T ss_pred chhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCce
Confidence 11223333 2 345566666655333 3677888899999999999999888998862 125677
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeee----------ecCCccceEEEeecCCCCCHHHHHH
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQ----------PIHALPNFFRLVLQNSALDHSDMDY 617 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~----------~~~~~~~~lR~~~~n~~~t~edid~ 617 (629)
+.|.... .. ...+.++|.++|..+-... .......+||++++ .++|++|||+
T Consensus 331 ~~~~~~~--~~---------------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~ 392 (397)
T TIGR01976 331 VSFTVHG--LP---------------PQRVVRRLADQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLA-HYNTAEEVDR 392 (397)
T ss_pred EEEEeCC--cC---------------HHHHHHHHHHCCeEEEeCccchHHHHHHhCCCCCCCeEEEEee-ccCCHHHHHH
Confidence 7776421 10 1256778888886432210 01112358999996 8999999999
Q ss_pred HHHHH
Q psy1785 618 FIDEI 622 (629)
Q Consensus 618 l~~~i 622 (629)
++++|
T Consensus 393 l~~~l 397 (397)
T TIGR01976 393 LLEAL 397 (397)
T ss_pred HHHhC
Confidence 99864
No 51
>PRK14012 cysteine desulfurase; Provisional
Probab=99.86 E-value=6.8e-19 Score=191.56 Aligned_cols=302 Identities=17% Similarity=0.238 Sum_probs=199.6
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH---cCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF---EGLG 335 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~---lGlg 335 (629)
-.++.+++++++|.+....++++|+|+++..++.+...... .+...|+++..+|+++..++.. .|+
T Consensus 51 ~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~----------~~gd~Vi~~~~~~~s~~~~~~~~~~~g~- 119 (404)
T PRK14012 51 VDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQ----------KKGKHIITSKTEHKAVLDTCRQLEREGF- 119 (404)
T ss_pred HHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhc----------CCCCEEEEecCccHHHHHHHHHHHhCCC-
Confidence 35667889999999877899999999998888766543211 1344678888999998776654 477
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
+++.|+++++|.+|+++|+++|.+ .+.+|+.+..++.+|.+.|+++|.++|+++|+++++ +++.+....+
T Consensus 120 --~~~~v~~~~~g~~d~~~l~~~i~~------~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~ 191 (404)
T PRK14012 120 --EVTYLDPQSNGIIDLEKLEAAMRD------DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPID 191 (404)
T ss_pred --EEEEEccCCCCcCCHHHHHHhcCC------CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccC
Confidence 899999999999999999998854 355788899999999999999999999999999999 5544333211
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
.. +.++|++++++||++ +|.++|+++++++... + ..+. +.+... . ..++.+.
T Consensus 192 ---------~~----~~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~-~---~~~~-~~g~~~--~-------~~~~~gt 243 (404)
T PRK14012 192 ---------LS----KLKVDLMSFSAHKIY-GPKGIGALYVRRKPRV-R---LEAQ-MHGGGH--E-------RGMRSGT 243 (404)
T ss_pred ---------cc----cCCCCEEEEehhhcc-CCCceEEEEEecCCCC-C---CCce-ecCCCc--c-------CCccCCC
Confidence 11 225999999999966 5889999999875322 1 1111 111100 0 0011111
Q ss_pred C-c-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC----CCceEEEEEeeCCCCCCCCchhhHH
Q psy1785 494 K-P-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE----PECTNISFWYIPPSLRGKEDQADFN 567 (629)
Q Consensus 494 ~-~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~----p~~~~v~F~~~p~~~~~~~~~~~~~ 567 (629)
. . ..+.+-.++... ..++.+..++..++++++.+.|++++++++..+. |....++|...+. .
T Consensus 244 ~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------~--- 311 (404)
T PRK14012 244 LPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG--------E--- 311 (404)
T ss_pred cCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH--------H---
Confidence 1 1 122222333332 3456777888999999999999999998876411 2223455543210 0
Q ss_pred HHHhhHHHHHHHHHH----hcCcEEEee--e--------ec--CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 568 ELLHKVAPKIKERMM----KSGSMMITY--Q--------PI--HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 568 ~~l~~~~~~i~~~l~----~~G~~~i~~--~--------~~--~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+...|. ..|..+... + +. .-..+.+|+++. +.+|++|||++++.|+++.++
T Consensus 312 --------~~~~~l~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~-~~~t~~dvd~~~~~l~~~~~~ 379 (404)
T PRK14012 312 --------SLIMALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLG-RFTTEEEIDYAIELVRKSIGK 379 (404)
T ss_pred --------HHHHhCCCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence 1222222 122111100 0 00 001258999995 999999999999999987643
No 52
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.85 E-value=4.1e-19 Score=190.49 Aligned_cols=318 Identities=16% Similarity=0.183 Sum_probs=210.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCC--CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH-HHHHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQGG--DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS-IKKLA 329 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~~~--~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S-i~kaa 329 (629)
+.+..+-.++.+.+++++|.++. ..++|+|||+++..++...... +..+++++...|.+ +.+.+
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~-------------~~~vlv~~~~~~~~~~~~~a 97 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPK-------------DGKLLVVINGAYGARIVQIA 97 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCC-------------CCeEEEEeCChhhHHHHHHH
Confidence 45566667889999999999764 5789999999987666543221 23345555555555 46778
Q ss_pred HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-ec-Cc
Q psy1785 330 AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-TW-NP 407 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A~-gg 407 (629)
+..|+ +++.|++++++.+|+++|++++.+. .....|..++..|.+|.+.|+++|.++|+++|++++| +. +.
T Consensus 98 ~~~g~---~~~~v~~~~~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~ 170 (363)
T TIGR02326 98 EYLGI---PHHVVDTGEVEPPDVVEVEAILAAD----PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSF 170 (363)
T ss_pred HHcCC---ceEEEeCCCCCCCCHHHHHHHHhhC----CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccc
Confidence 88898 9999999999999999999988652 1233577788899999999999999999999999999 32 21
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCC-ccccCCcCCCcccCCCC
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASAS-YLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~-yl~~~~~~~~~~~~~~~ 486 (629)
+.... ... +.++|.++.++|||+++|.|.|+++++++ .+......... |+.............+.
T Consensus 171 g~~~~---------~~~----~~~~D~~~~s~~K~l~~p~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (363)
T TIGR02326 171 GGIPI---------DIA----ELHIDYLISSANKCIQGVPGFGFVIARQA-ELAACKGNARSLSLDLYDQWRCMEDNHGK 236 (363)
T ss_pred cCccc---------chh----hcCccEEEecCccccccCCcceEEEECHH-HHHHhhcCCCceeecHHHHHHHHhccCCC
Confidence 11111 111 22599999999999999999999999875 33322111111 11000000000000000
Q ss_pred ccCCCCCC-cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC--CceE-EEEEeeCC-CCCCC
Q psy1785 487 KHIQCGRK-PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP--ECTN-ISFWYIPP-SLRGK 560 (629)
Q Consensus 487 ~~~~~sr~-~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p--~~~~-v~F~~~p~-~~~~~ 560 (629)
..+ +.. ...+.+..+++.+..+ |++++.++..++++++++.|+++ |++++. ++ ..++ ++|++.+. ..+
T Consensus 237 ~~f--t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~~~~~~-- 310 (363)
T TIGR02326 237 WRF--TSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLL-DDEIQSPIITSFYSPEDPDYR-- 310 (363)
T ss_pred CCC--CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeecc-CcccCCceEEEEECCCCCCCC--
Confidence 001 111 2345566667666555 58889999999999999999987 898875 32 3443 45665321 111
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
...+.+.|.++|.....+... + .++||++++ ..++.+|++.+++.|+++.
T Consensus 311 -------------~~~v~~~L~~~gi~v~~g~~~-~-~~~iRi~~~-~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 311 -------------FADFYQRLKEQGFVIYPGKVS-Q-VDCFRIGNI-GEVDAADITRLLTAIGKAM 360 (363)
T ss_pred -------------HHHHHHHHHHCCEEEECCcCC-C-CCEEEEecC-CCCCHHHHHHHHHHHHHHh
Confidence 125677888888654222211 1 358999986 6789999999999998864
No 53
>KOG1549|consensus
Probab=99.85 E-value=2.2e-19 Score=187.71 Aligned_cols=347 Identities=17% Similarity=0.182 Sum_probs=218.3
Q ss_pred CCCCccccccCCCCChHHHHH---HHHHH-hcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHH
Q psy1785 215 TGHPYFVNQLFSSVDPYGLVG---QWLAD-ALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYA 290 (629)
Q Consensus 215 ~~~p~~~g~~~s~~~~~~~~~---~~lt~-~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~a 290 (629)
...+.|+++-.+++-...++- .|+.. +.|++.. ..+.-....-+++++.+++|+|.++.+.+||+|+|++|.++
T Consensus 41 ~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~--~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlv 118 (428)
T KOG1549|consen 41 GTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR--SYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLV 118 (428)
T ss_pred CCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc--ccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHH
Confidence 345777776665554443332 33333 3444432 11111222236678899999999998899999999999888
Q ss_pred HHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHc---CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCC
Q psy1785 291 ISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFE---GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGA 367 (629)
Q Consensus 291 l~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~l---Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~ 367 (629)
+..--+.. ++ + ..+ .|++....|.|+.++++.+ |+ .|+.||++.+|-.|.+.|++.|+.
T Consensus 119 l~~v~~~~----~~-~---~~k-~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~~~~~d~~~~~~~i~~------ 180 (428)
T KOG1549|consen 119 LKGVARFF----GD-K---TKK-HIITLQTEHPCVLDSCRALQEEGL---EVTYLPVEDSGLVDISKLREAIRS------ 180 (428)
T ss_pred HHHhhccc----cc-c---ccc-eEEEecccCcchhHHHHHHHhcCe---EEEEeccCccccccHHHHHHhcCC------
Confidence 77543321 11 1 122 7889999999999888765 66 999999999999999999999987
Q ss_pred CcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCC
Q psy1785 368 VPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA 445 (629)
Q Consensus 368 ~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~ 445 (629)
.+.+|...+.++..|.+.|++||..+|+++++.+|+ |.+-++... +.++ .++|.+++++|||+|.
T Consensus 181 ~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~v---------DV~e----ln~D~~s~s~HK~ygp 247 (428)
T KOG1549|consen 181 KTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPV---------DVQE----LNADFLSISAHKIYGP 247 (428)
T ss_pred CceEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccc---------cHHH----cCchheeeecccccCC
Confidence 477899999999999999999999999999999999 565555433 2333 3799999999999986
Q ss_pred CCccEEEEEecc-chhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc--chHHHHHHHHhc--ChhhHHHHHHHHH
Q psy1785 446 PQQCSVFLTRHQ-SVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP--DVLKFWFMWKAK--GTDGLEAHIDKSF 520 (629)
Q Consensus 446 P~~~g~ll~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~--~al~~w~~l~~~--G~~G~~~~~~~~~ 520 (629)
|. +|+||+|.+ ..+ ...+.+..+.. ..++..+... .++.+-.+.+.. ...+.+.++++
T Consensus 248 ~~-iGaLYvr~~~~~~----~~~p~~~GGgq----------~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~-- 310 (428)
T KOG1549|consen 248 PG-IGALYVRRKRPRL----RVEPPLSGGGQ----------ERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR-- 310 (428)
T ss_pred Cc-ceEEEEccCCCcc----cccCcccCCcc----------ccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHHH--
Confidence 65 999999972 212 12234433221 1112222222 223333333332 22334444443
Q ss_pred HHHHHHHHHHhc-CCCcEEEccC----CCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEee----
Q psy1785 521 DNAKYFTDKIRH-RPGFKLVLDE----PECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITY---- 591 (629)
Q Consensus 521 ~la~~l~~~L~~-~~g~~l~~~~----p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~---- 591 (629)
+...+...+.. .+...+..++ |.+.++.|.|. .+.... . ..+......|..+.+.
T Consensus 311 -~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~-~g~~~~-------~-------~~~~~~l~s~~a~~~~~~ep 374 (428)
T KOG1549|consen 311 -LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYV-EGESLL-------M-------DLKDVALSSGSACTSASLEP 374 (428)
T ss_pred -HHHHHHHHHhhhCchhhccCCcccccccceeeecccc-cCcchh-------h-------hhhhhhhcccchhhcCCCCc
Confidence 55555555543 5555554422 45566666632 111110 0 1122222333322111
Q ss_pred --eec-CC-----ccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 592 --QPI-HA-----LPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 592 --~~~-~~-----~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
... .| ....+|+++. .++|++|++++++.|.+.+..
T Consensus 375 sy~l~~~G~~~~~~~~~iRis~G-~y~t~~di~~~~~~i~~~v~~ 418 (428)
T KOG1549|consen 375 SYVLRAIGVDEDLAHSSIRISIG-RYTTEEDIDYLVDAIKKLVSL 418 (428)
T ss_pred chhhhhcCcchhhhcceeEEeee-eeCcHHHHHHHHHHHHHHHHh
Confidence 000 01 1247999997 999999999999999987654
No 54
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.84 E-value=3.2e-18 Score=183.44 Aligned_cols=306 Identities=16% Similarity=0.231 Sum_probs=205.2
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|. .+.++++|+|+++..++.+.. .|...|+++..+|++...+++..|+ ++
T Consensus 47 ~~l~~~la~~~g~--~~i~~~~g~t~al~~~l~~~~--------------~~gd~Vl~~~~~~~~~~~~~~~~g~---~~ 107 (361)
T cd06452 47 KDFHHDLAEFLGM--DEARVTPGAREGKFAVMHSLC--------------EKGDWVVVDGLAHYTSYVAAERAGL---NV 107 (361)
T ss_pred HHHHHHHHHHcCC--ceEEEeCCHHHHHHHHHHHhc--------------CCCCEEEEcCCcchHHHHHHHhcCC---EE
Confidence 5666678999998 468999999999877665432 1344677888999999999999998 99
Q ss_pred EEEecCCCC--CCCHHHHHHHHHHHHhC-CCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 340 YLIKTDARG--RMLPESLRGEIQRTLAE-GAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ~~V~~d~~g--~~d~~~Le~~i~~~~~~-g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+.|++++++ .+|+++|++++.+..++ +..+.+|+.+..++.+|.++|+++|.++|+++|++++| |++.......
T Consensus 108 ~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~- 186 (361)
T cd06452 108 REVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVS- 186 (361)
T ss_pred EEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCC-
Confidence 999998765 89999999999764332 23466788888889999999999999999999999999 7664332111
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCcc-CCCC-
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKH-IQCG- 492 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~~~s- 492 (629)
. .+.|+|.++.++||++++|.++|++++++ ........... +. + ....+ +.++
T Consensus 187 --------~----~~~~~d~~~~s~~K~l~~~~~~G~l~~~~-~~~~~l~~~~~-~~-------~----~~~~~~~~~~~ 241 (361)
T cd06452 187 --------G----KELGADFIVGSGHKSMAASAPIGVLATTE-EWADIVFRTSQ-MF-------K----IKEVELLGCTL 241 (361)
T ss_pred --------H----HHcCCCEEEecCCccccCCCCeEEEEECH-HHHHHHhcccc-cc-------c----cceeeeecccc
Confidence 1 12358999999999999888999888865 44444322211 11 0 00001 1112
Q ss_pred CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 493 RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
+...+..++.++... .+. .+..++..+.++++++.|++++|++++.+ +...+.+.|+.. ... .......
T Consensus 242 ~~~~~~~~~~al~~~-~~~-~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~--~~~------~~~~~~~ 311 (361)
T cd06452 242 RGAPLVTLMASFPHV-KER-VKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP--SFD------EIAKKHK 311 (361)
T ss_pred CchHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC--Ccc------hhhhhcc
Confidence 223455555555443 222 34556667788999999999999998742 233445555532 110 0000000
Q ss_pred hHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 572 KVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 572 ~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.-..++.+.|.++|... . ..+...++|+++. ..|++|++.++++|+++.
T Consensus 312 ~~~~~~~~~L~~~gI~~-~---~~~~~~~~ri~~~--g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 312 RRGYFLYSELKKRGIHG-I---KPGLTRYFKLSTY--GLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred ccchhHHHHHHHcCceE-E---cCCCceEEEEEec--CCCHHHHHHHHHHHHHHh
Confidence 00125778888888642 1 1233357898873 479999999999998764
No 55
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.84 E-value=3.5e-18 Score=185.70 Aligned_cols=324 Identities=15% Similarity=0.129 Sum_probs=215.8
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH--HH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI--KK 327 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si--~k 327 (629)
.++.+..+-+++.+++++++|.+. ...+++++||.++..++.... .|...|+++...|++. ..
T Consensus 36 ~~~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~--------------~~Gd~Vlv~~~~~~~~~~~~ 101 (401)
T PLN02409 36 RSPAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL--------------SPGDKVVSFRIGQFSLLWID 101 (401)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC--------------CCCCEEEEeCCCchhHHHHH
Confidence 467788888999999999999975 356788888887665554321 1333456666788764 57
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHH--HHHcCCeEEE--
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADI--CAEYDMADSV-- 403 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i--~~~~~~~lhV-- 403 (629)
.++..|+ +++.++.++++.+|+++|++++.+.. +..+.+|..++..|.+|.+.|+++|.++ |+++|++++|
T Consensus 102 ~~~~~g~---~v~~v~~~~~~~~~~~~l~~~l~~~~--~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~ 176 (401)
T PLN02409 102 QMQRLNF---DVDVVESPWGQGADLDILKSKLRQDT--NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDG 176 (401)
T ss_pred HHHHcCC---ceEEEECCCCCCCCHHHHHHHHhhCc--CCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEc
Confidence 7788898 99999998777799999999887521 1245678889999999999999999999 9999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcC--CCCccccCCcCCCcc
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSA--SASYLFQKDKFYDTK 481 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~--~~~yl~~~~~~~~~~ 481 (629)
+.+.+.... ... +.|+|.++.++|||+++|.|+|+++++++ .++..... .+.|..-.. ....
T Consensus 177 v~s~g~~~i---------d~~----~~~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~ 240 (401)
T PLN02409 177 VSSIGALDF---------RMD----EWGVDVALTGSQKALSLPTGLGIVCASPK-ALEASKTAKSPRVFFDWAD--YLKF 240 (401)
T ss_pred ccccCCccc---------ccc----ccCccEEEEcCccccCcCCCcceeEECHH-HHHHHhcCCCCCeecCHHH--HHHH
Confidence 332222111 111 23699999999999999999999998775 44432211 111211000 0000
Q ss_pred cCCCCccCCCCCC-cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC--Cc-eEEEEEeeCCCC
Q psy1785 482 YDSGDKHIQCGRK-PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP--EC-TNISFWYIPPSL 557 (629)
Q Consensus 482 ~~~~~~~~~~sr~-~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p--~~-~~v~F~~~p~~~ 557 (629)
...+... ..+-. ...+.+..+++.+...|++++.++..++++++++.|++. |++++.+++ .. .+++|++ |.+.
T Consensus 241 ~~~g~~~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~-p~~~ 317 (401)
T PLN02409 241 YKLGTYW-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVV-PEGI 317 (401)
T ss_pred HhcCCCC-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeC-CCCC
Confidence 0001000 01111 134556667777778899999999999999999999987 999886211 23 3445654 3322
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.. .++.+++.++..+.+......-+..+||++.+ .+++++||..++++|++...+
T Consensus 318 ~~---------------~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~-g~~~~~~~~~~~~~~~~~l~~ 372 (401)
T PLN02409 318 DS---------------AEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHL-GNVNELQLLGALAGVEMVLKD 372 (401)
T ss_pred CH---------------HHHHHHHHHhCCEEEEcCCCcccCCEEEEcCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 10 24555554443344443222212358999998 789999999999999876543
No 56
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.83 E-value=8e-18 Score=179.33 Aligned_cols=316 Identities=15% Similarity=0.195 Sum_probs=206.7
Q ss_pred hHHHHHHHHHHHHHHHhCCCCC--CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH-HHHHHH
Q psy1785 254 VFSLMEEHVLAQMRTIVGFQGG--DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS-IKKLAA 330 (629)
Q Consensus 254 ~~~~~E~~~~~~l~~l~G~~~~--~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S-i~kaa~ 330 (629)
....+-.++.+.+++++|.++. ...+++|||+++..++...... +..+++.+...+.+ +..++.
T Consensus 28 ~~~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~-------------~~~vi~~~~~~~~~~~~~~a~ 94 (355)
T TIGR03301 28 EFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPR-------------DGKLLVLINGAYGERLAKICE 94 (355)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCC-------------CCeEEEECCCchhhHHHHHHH
Confidence 3446678889999999999864 4668999999887776543211 12344455444433 567788
Q ss_pred HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-ecCccc
Q psy1785 331 FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-TWNPHK 409 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A~gg~~ 409 (629)
..|+ +++.|+.++++.+|+++|++.+.+. ....+|..++..|.+|.+.|+++|.++|++++++++| ++....
T Consensus 95 ~~g~---~~~~i~~~~~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g 167 (355)
T TIGR03301 95 YLGI---PHTDLNFSEYEPPDLNRIEEALAAD----PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFG 167 (355)
T ss_pred HcCC---ceEEEecCCCCCCCHHHHHHHHHhC----CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccC
Confidence 8898 9999999888899999999988641 2345677788889999999999999999999999999 432211
Q ss_pred cccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc--
Q psy1785 410 LLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK-- 487 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~-- 487 (629)
. .|. ... +.++|.++.++|||+++|.|+|+++++++ .++.......++...... .+.....
T Consensus 168 ~--~~~------~~~----~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 230 (355)
T TIGR03301 168 A--IPI------DIE----ELDVDALIASANKCLEGVPGFGFVIARRD-LLEASAGNARSLYLDLYD----QWAYMEKTG 230 (355)
T ss_pred C--ccc------chh----hcCccEEEecCCcccccCCceeEEEECHH-HHHHhhCCCCCceeeHHH----HHHHhhhcC
Confidence 1 111 111 22589999999999988989999998874 444322111111111000 0000000
Q ss_pred cCCCCCC-cchHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC--ce-EEEEEeeCCCCCCCCc
Q psy1785 488 HIQCGRK-PDVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE--CT-NISFWYIPPSLRGKED 562 (629)
Q Consensus 488 ~~~~sr~-~~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~--~~-~v~F~~~p~~~~~~~~ 562 (629)
....+.. .....+..+++.+..+| +.+..++..++++++.+.|++. |++++. ++. .+ .++|++++.. .
T Consensus 231 ~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~~~-~---- 303 (355)
T TIGR03301 231 KWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLL-PERWQSPIIVSFLYPDDP-D---- 303 (355)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeec-CCCCCCCcEEEEECCCCC-c----
Confidence 0001111 12345566777776666 8889999999999999999987 888765 322 22 3455543211 0
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.. ..++.++|.++|.++ ........ +++|++++ ..+|++||+.+++.|+++
T Consensus 304 ---~~------~~~~~~~l~~~gi~i-~~~~~~~~-~~iRis~~-~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 304 ---FD------FDDFYQELKERGFVI-YPGKLTLA-DTFRIGTI-GEIDAADIERLLEAIKDA 354 (355)
T ss_pred ---ch------HHHHHHHHHHCCEEE-ECCccccc-cEEEEecC-CCCCHHHHHHHHHHHHhh
Confidence 00 135677888888643 32211112 58999995 789999999999999864
No 57
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.81 E-value=2e-18 Score=176.50 Aligned_cols=305 Identities=21% Similarity=0.248 Sum_probs=203.5
Q ss_pred cccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 247 YTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 247 ~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
..|..+|.+..+|. ++++++|. ..+.|+++||++|..++.+..+ |.-.|++..++|....
T Consensus 29 ~~YG~D~~~~~~e~----~~ae~~g~--~a~~Fv~sGT~aN~lal~~~~~--------------~~~~vi~~~~aHi~~~ 88 (342)
T COG2008 29 DVYGEDPTTNALEQ----RIAELFGK--EAALFVPSGTQANQLALAAHCQ--------------PGESVICHETAHIYTD 88 (342)
T ss_pred CCCCCCHHHHHHHH----HHHHHhCC--ceEEEecCccHHHHHHHHHhcC--------------CCCeEEEeccccceec
Confidence 45677787755554 58899988 6799999999999999987763 4557889999999998
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHH-HhCCCCcEEEEEeeCCCccccccCHH---HHHHHHHHcCCeEE
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRT-LAEGAVPFMVSATSGTTVLGAFDPIP---AIADICAEYDMADS 402 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~-~~~g~~~~~Vvat~Gtt~~G~idpl~---ei~~i~~~~~~~lh 402 (629)
+++..-=++.-..+.+...++|+|++++++.+|... .-....|.+|.-+.-+ ..|.+-|++ +|.++||++|+.+|
T Consensus 89 E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~~k~~~l~LH 167 (342)
T COG2008 89 ECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAVCKEHGLPLH 167 (342)
T ss_pred ccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHHHHHhCCcee
Confidence 865543332223444444578999999999998752 1223466777666655 778876554 55667999999999
Q ss_pred E--e--cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 403 V--T--WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 403 V--A--~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
+ | |++...+.+ ... .+..++||+++.+.|.++.|. |.+++-++++.+++. |.....
T Consensus 168 mDGAR~~nA~valg~--------~~~--~~~~~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~a~-----~~rK~~--- 227 (342)
T COG2008 168 MDGARLANALVALGV--------ALK--TIKSYVDSVSFCLTKGGGAPV--GAIVFGNRDFAKRAR-----RWRKRA--- 227 (342)
T ss_pred echHHHHHHHHHcCC--------CHH--HHHhhCCEEEEecccCCccee--eeEEEcCHHHHHHHH-----HHHHHh---
Confidence 9 3 555444433 111 134469999999999999985 556777766665532 221110
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLR 558 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~ 558 (629)
-++-|+.+.+++-. +-++..+-+....+|..+||++|++.+.+.||+++.. +++.|+|..++. .
T Consensus 228 ----------Ggl~~k~r~laA~~-~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~-~~~tN~vf~~l~-~--- 291 (342)
T COG2008 228 ----------GGLMRKARFLAAQG-LYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAF-PVETNMVFVRLP-E--- 291 (342)
T ss_pred ----------cccHhhhhHHHHHH-HHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceecc-CCcccEEEEECC-h---
Confidence 02334443332211 1223345577778888899999999999899999988 678877755542 1
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
...+.+...|..+....-.......+|++++ +.+|++|||.++..++++.
T Consensus 292 -----------------~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts-~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 292 -----------------SAIEALRLAGALFYRGVLIGAHGEIVRFVTS-WATSEEDVDELVAAIKALL 341 (342)
T ss_pred -----------------HHHHHHHhhchhheeeeeccCCCceEEEEee-ccCCHHHHHHHHHHHHHhh
Confidence 1114444555433221111111136999984 9999999999999998864
No 58
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.81 E-value=8.3e-18 Score=185.42 Aligned_cols=308 Identities=14% Similarity=0.131 Sum_probs=201.8
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEe---CCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFC---PGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~---~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
......+|..+++.+++++|.+.....++ ++||.+|+.++.+.. .|...|+++...|.+....
T Consensus 75 ~~~~~~iE~~ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~--------------~~gd~Ii~~~~ehg~~l~~ 140 (452)
T PTZ00094 75 NEVVDKIENLCQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALL--------------QPHDRIMGLDLPSGGHLTH 140 (452)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhc--------------CCCCEEEecccccCCcccc
Confidence 34456788788999999999976554455 789999988776542 1345677888888775543
Q ss_pred HHHc--------CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCe
Q psy1785 329 AAFE--------GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMA 400 (629)
Q Consensus 329 a~~l--------Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~ 400 (629)
+..+ +.+ -++..++++.+|.+|+++|++.+.+. .|..|++ +.+.+|.+.|+++|+++|+++|++
T Consensus 141 ~~~l~~~~~~~~~~~-~~~~~~~~~~~g~id~~~L~~~l~~~-----~~~lvi~--~~s~~g~~~di~~I~~i~~~~ga~ 212 (452)
T PTZ00094 141 GFYTAKKKVSATSIY-FESLPYQVNEKGLIDYDKLEELAKAF-----RPKLIIA--GASAYPRDIDYKRFREICDSVGAY 212 (452)
T ss_pred cccccccccccceee-eeeeecccCCCCCcCHHHHHHHHHHh-----CCCEEEE--eCCCCCCccCHHHHHHHHHHcCCE
Confidence 3211 110 03455667878999999999998642 2333443 345799999999999999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
+|| +++.+..... .....+. ++|.+++++|||+++|.| |++++++. ........-...++.
T Consensus 213 l~vDaaq~~G~i~~~---------~~~~~~~-~~D~l~~S~hK~l~GP~G-g~l~~~~~-~~~~l~~~~~~~~~p----- 275 (452)
T PTZ00094 213 LMADIAHTSGLVAAG---------VLPSPFP-YADVVTTTTHKSLRGPRS-GLIFYRKK-VKPDIENKINEAVFP----- 275 (452)
T ss_pred EEEeccchhccccCC---------CCCCCCC-CCcEEEcCCccCCCCCCc-eEEEEecc-cchHHHHhhccccCC-----
Confidence 999 6666554322 0001134 499999999999999997 88888663 222110000001110
Q ss_pred CcccCCCCccCCCCCC-cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc--CCCceEEEEEeeCC
Q psy1785 479 DTKYDSGDKHIQCGRK-PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD--EPECTNISFWYIPP 555 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~-~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~--~p~~~~v~F~~~p~ 555 (629)
.++++-. ...+.+..+++.+...+++++.++..+++++|.+.|++. |++++.+ +....+|.|...
T Consensus 276 ---------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~-- 343 (452)
T PTZ00094 276 ---------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPF-- 343 (452)
T ss_pred ---------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcC--
Confidence 1122222 246667777887767788889999999999999999886 9998752 122344444321
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC-----CccceEEEeecCCCCC----HHHHHHHHHHHHHHh
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIH-----ALPNFFRLVLQNSALD----HSDMDYFIDEIERLG 626 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~-----~~~~~lR~~~~n~~~t----~edid~l~~~i~~l~ 626 (629)
+.. ...+...|.+.|.. ++..... -.+..+|+++. ..|| ++||+++++.|.++.
T Consensus 344 ~~~---------------~~~~~~~L~~~gI~-vs~~~~p~~~~~~~~~~vRis~~-~~tt~g~~~~di~~l~~~l~~~~ 406 (452)
T PTZ00094 344 GIT---------------GSKMEKLLDAVNIS-VNKNTIPGDKSALNPSGVRLGTP-ALTTRGAKEKDFKFVADFLDRAV 406 (452)
T ss_pred CCC---------------HHHHHHHHHHCCcE-EecccCCCCCcCCCCCeEEECCH-HHHhCCCCHHHHHHHHHHHHHHH
Confidence 111 02456667666754 4322111 12358999994 6666 999999999998876
Q ss_pred h
Q psy1785 627 H 627 (629)
Q Consensus 627 ~ 627 (629)
+
T Consensus 407 ~ 407 (452)
T PTZ00094 407 K 407 (452)
T ss_pred H
Confidence 4
No 59
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.81 E-value=1.1e-17 Score=195.88 Aligned_cols=366 Identities=14% Similarity=0.092 Sum_probs=219.0
Q ss_pred ccccccCCCCChHHHHHHHHHHh-----cCCCccccccChhHHHHHHHHHHHHHHHhCCCCC--CeEEeCCchhhHHHHH
Q psy1785 219 YFVNQLFSSVDPYGLVGQWLADA-----LNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGG--DGIFCPGGSMANGYAI 291 (629)
Q Consensus 219 ~~~g~~~s~~~~~~~~~~~lt~~-----~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~--~g~~~~GgT~an~~al 291 (629)
.|+++-.++..+...+.+.+..+ .|+.. .+..+.....+-.++.+.+++++|.+.. ..+||+|+|+++..+.
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s-~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva 114 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPHS-QSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVG 114 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCc-CcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHH
Confidence 46666655543323333333322 23332 2334555666778899999999999764 4799999999976553
Q ss_pred HHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH---HHHcCCCCCCEEEEecC--------CCCCCCH--HHHHHH
Q psy1785 292 SCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL---AAFEGLGSDNVYLIKTD--------ARGRMLP--ESLRGE 358 (629)
Q Consensus 292 ~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka---a~~lGlg~~~v~~V~~d--------~~g~~d~--~~Le~~ 358 (629)
..... .+...|+++...|.|+.-. ++-.|+ +++.++++ +.|.+++ ++|++.
T Consensus 115 ~~l~~-------------~~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~ 178 (805)
T PLN02724 115 ETFPW-------------SSESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPTNSQGSVVVKSRGLQRR 178 (805)
T ss_pred HHCCC-------------CCCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhccccccccccccccchhhhhhh
Confidence 22110 1334567788899886533 334577 89999887 4455554 566665
Q ss_pred HHHHH----hCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc-------C-CeEEE--ecCcccccccccccccccccc
Q psy1785 359 IQRTL----AEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY-------D-MADSV--TWNPHKLLTAPQQCSVFLTRR 424 (629)
Q Consensus 359 i~~~~----~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~-------~-~~lhV--A~gg~~l~~~~~~~~~~l~~~ 424 (629)
+.+.. ..+..+.+|+.++.++++|.+.||++|..+++.. + ++++| |...+.... +.+
T Consensus 179 ~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~pi---------Dv~ 249 (805)
T PLN02724 179 NTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPP---------DLS 249 (805)
T ss_pred hhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCC---------Chh
Confidence 42101 1123446899999999999999999876655532 3 34667 333222221 122
Q ss_pred ccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCC-------cccCCCCccCCCCCCc--
Q psy1785 425 NYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYD-------TKYDSGDKHIQCGRKP-- 495 (629)
Q Consensus 425 ~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~-------~~~~~~~~~~~~sr~~-- 495 (629)
+.++|.+++++|||+|.|.|+|+|++|++ .+.. ..+.|.......+. ...+.....++.|...
T Consensus 250 ----~~~~Dfl~~S~HK~~GgP~G~G~L~vr~~-~~~~---l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~ 321 (805)
T PLN02724 250 ----RYPADFVVVSFYKIFGYPTGLGALLVRRD-AAKL---LKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFL 321 (805)
T ss_pred ----hcCCCEEEEecceeccCCCCceEEEEehh-hhhh---hcCCccCCCceEEEecccceeeccccHHHHhcCCCcchh
Confidence 22699999999999999999999999974 3322 12333322110000 0001111223444442
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC------CcEEEccC-------CCceEEEEEeeCCCCCCCCc
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP------GFKLVLDE-------PECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~------g~~l~~~~-------p~~~~v~F~~~p~~~~~~~~ 562 (629)
.++.+..+++.+-..|++++.++..+|+++|.+.|++++ +++++.+. ...++|+|.+.........
T Consensus 322 ~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~- 400 (805)
T PLN02724 322 SIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVG- 400 (805)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeC-
Confidence 566777788887777899999999999999999999986 57887521 2468999988643211000
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEee---e------------------------ecCCcc-ceEEEeecCCCCCHHH
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITY---Q------------------------PIHALP-NFFRLVLQNSALDHSD 614 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~---~------------------------~~~~~~-~~lR~~~~n~~~t~ed 614 (629)
..+. ..|.. ......+.|..+-.. . .+.+++ +++|+|+. +++|.+|
T Consensus 401 ~~~v-~~l~~----~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g-~ynt~eD 474 (805)
T PLN02724 401 HREV-EKLAS----LSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG-YMSTFED 474 (805)
T ss_pred HHHH-HHHHH----hcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC-ccCCHHH
Confidence 0011 11100 011222223221100 0 001222 68999996 9999999
Q ss_pred HHHHHHHHHHH
Q psy1785 615 MDYFIDEIERL 625 (629)
Q Consensus 615 id~l~~~i~~l 625 (629)
||+|++.|++.
T Consensus 475 vd~lv~~l~~~ 485 (805)
T PLN02724 475 CQKFIDFIISS 485 (805)
T ss_pred HHHHHHHHHHH
Confidence 99999999874
No 60
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.81 E-value=2.5e-17 Score=176.96 Aligned_cols=321 Identities=16% Similarity=0.181 Sum_probs=208.9
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCC--CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH--HHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQGG--DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI--KKL 328 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~~~--~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si--~ka 328 (629)
+.+.....++.+.+++++|.+.. ...++++||.++..++.....+ +..+++.+ ..+|.. .+.
T Consensus 33 ~~~~~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~-------------~~~vlv~~-~~~~~~~~~~~ 98 (368)
T PRK13479 33 DDFNALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPR-------------DGKVLVPD-NGAYGARIAQI 98 (368)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCC-------------CCeEEEEe-CCchHHHHHHH
Confidence 44556778889999999998652 3668889999877666654221 23334433 444443 577
Q ss_pred HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-ecCc
Q psy1785 329 AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-TWNP 407 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A~gg 407 (629)
++..|+ +++.||.++++.+|+++|++++.+. .....|..++..|.+|.+.|+++|.++|+++|++++| ++..
T Consensus 99 ~~~~g~---~~~~i~~~~~~~~d~~~l~~~l~~~----~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~ 171 (368)
T PRK13479 99 AEYLGI---AHVVLDTGEDEPPDAAEVEAALAAD----PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSS 171 (368)
T ss_pred HHHcCC---cEEEEECCCCCCCCHHHHHHHHHhC----CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccc
Confidence 888898 9999999888899999999988641 1233577888899999999999999999999999999 4322
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
.. ..|. ... +.++|.+++++|||+++|.|+|+++++++ .+........+|.......+......+..
T Consensus 172 ~g--~~~~------~~~----~~~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (368)
T PRK13479 172 FG--AIPI------DIA----ELGIDALISSANKCIEGVPGFGFVIARRS-ELEACKGNSRSLSLDLYDQWAYMEKTGQW 238 (368)
T ss_pred cC--Cccc------ccc----ccCceEEEecCccccccCCCceEEEECHH-HHHHhhcCCCCeeecHHHHHhhhcccCCC
Confidence 11 0110 111 22589999999999999999999999774 33332221112111100000000000111
Q ss_pred cCCCCCC-cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC--Cc-eEEEEEeeCCCCCCCCc
Q psy1785 488 HIQCGRK-PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP--EC-TNISFWYIPPSLRGKED 562 (629)
Q Consensus 488 ~~~~sr~-~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p--~~-~~v~F~~~p~~~~~~~~ 562 (629)
.+ +.. ...+.+..+++.+..+ ++++++++..++++++++.|+++ |++++. ++ .. .+++|++.... +. +
T Consensus 239 ~~--t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~~~--~~-~ 311 (368)
T PRK13479 239 RF--TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLL-DAEIQSPIIVTFHAPADP--AY-D 311 (368)
T ss_pred CC--CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccC-CchhcCceEEEEECCCCC--Cc-C
Confidence 00 111 2345566677666444 58888999999999999999998 898765 32 22 34667653211 00 0
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..++.++|.++|..+ ....... .+++|++++ .++|++|++++++.|+++.++
T Consensus 312 -----------~~~l~~~L~~~gi~v-~~g~~~~-~~~iRis~~-~~~t~edi~~~l~~L~~~l~~ 363 (368)
T PRK13479 312 -----------FKEFYERLKEQGFVI-YPGKLTQ-VDTFRIGCI-GDVDAADIRRLVAAIAEALYW 363 (368)
T ss_pred -----------HHHHHHHHHHCCEEE-ecCCCCC-CCEEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence 135778888888654 3221111 247999985 688999999999999987654
No 61
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.80 E-value=1e-17 Score=180.51 Aligned_cols=313 Identities=12% Similarity=0.097 Sum_probs=200.2
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeC-CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH-H
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCP-GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI-K 326 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~-GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si-~ 326 (629)
..++.+..+-+++++.+++++|.++ ...+|++ +||.++..++... .+ .++..++++ ..|.+- .
T Consensus 41 hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l-~~------------~~~~~vi~~-g~f~~~~~ 106 (378)
T PRK03080 41 HRQKPVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSL-LG------------ARRVDHLAW-ESFGSKWA 106 (378)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhc-CC------------CCcceEEEe-CHHHHHHH
Confidence 3456788888999999999999965 4688886 7787766555332 10 023344444 466653 3
Q ss_pred H-HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-e
Q psy1785 327 K-LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-T 404 (629)
Q Consensus 327 k-aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A 404 (629)
+ +++..|+ ++++.++.++.+..|+++++. +..|..++.+|.+|.+.|+++|++ +++|+++.| +
T Consensus 107 ~~~~~~~g~--~~v~~~~~~~g~~~d~~~i~~-----------~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa 171 (378)
T PRK03080 107 TDVVKQLKL--EDPRVLEADYGSLPDLSAVDF-----------DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDA 171 (378)
T ss_pred HHHHhhcCC--CCceEeccCCCCCCCHhhcCC-----------CCCEEEEecCCccceeccchhhcc--ccCCCeEEEec
Confidence 3 3345554 478888888777888776332 123888999999999999999999 889999999 3
Q ss_pred c-CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC-----CCccccCCcCC
Q psy1785 405 W-NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS-----ASYLFQKDKFY 478 (629)
Q Consensus 405 ~-gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~-----~~yl~~~~~~~ 478 (629)
. +.+....+ ++. +|.+++++||||++|.|+|+++++++ .+....... +.|+.-..
T Consensus 172 ~qs~G~~pid--------------v~~-iD~~~~s~~K~l~~P~G~g~l~v~~~-~~~~~~p~~~~~~~~~~~~~~~--- 232 (378)
T PRK03080 172 TSAAFALPLD--------------WSK-LDVYTFSWQKVLGGEGGHGMAILSPR-AVERLESYTPARPIPKFFRLTK--- 232 (378)
T ss_pred ccccccCCCC--------------HHH-CcEEEEehhhhCCCCCceEEEEECHH-HHHhhhcccCCCCCchhheecc---
Confidence 2 22222211 344 89999999999999999999999985 343321111 11211000
Q ss_pred CcccCCCCccCCCCCC--c---chHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC--Cc-eEEE
Q psy1785 479 DTKYDSGDKHIQCGRK--P---DVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP--EC-TNIS 549 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~--~---~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p--~~-~~v~ 549 (629)
.+.......+.+.. . ....+..+++.+-.. |++++.++..++++++++.|+++++++++...+ .. .+++
T Consensus 233 --~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~ 310 (378)
T PRK03080 233 --GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATPLVADPATRSNTSVT 310 (378)
T ss_pred --chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccCccEEE
Confidence 00000001122221 1 233445678888776 899999999999999999999997788764112 23 5788
Q ss_pred EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 550 FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 550 F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
|++.... .. . ...+..++.++|.+... .......+.+|++++ .++|++|||+++++|+++.++
T Consensus 311 ~~~~~~~-------~~----~---~~~~~~~l~~~~i~v~~-g~~~~~~~~vRis~~-~~~t~~di~~l~~al~~~~~~ 373 (378)
T PRK03080 311 LDFVDAQ-------AA----V---DAAAVAKLLRENGAVDI-EPYRDAPNGLRIWCG-PTVEPADVEALTPWLDWAFER 373 (378)
T ss_pred EEcCCch-------HH----H---HHHHHHHHHHcCCeecc-ccccCCCCcEEEecC-CCCCHHHHHHHHHHHHHHHHH
Confidence 8753200 00 0 11344455556643221 111112357999985 999999999999999987553
No 62
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.80 E-value=4.3e-17 Score=174.10 Aligned_cols=254 Identities=17% Similarity=0.151 Sum_probs=179.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH--
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA-- 330 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~-- 330 (629)
.....+..++.+++++++|.+..+.+|++|+|+++..++........ .. .+..|+++...|+|+.....
T Consensus 38 ~~~~~~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~----~~-----g~~~vi~~~~~~~s~~~~~~~~ 108 (353)
T TIGR03235 38 HNAKKAVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGE----QK-----GKKHIITSAIEHPAVLEPIRAL 108 (353)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcc----cC-----CCCeeeEcccccHHHHHHHHHH
Confidence 33455667889999999999877899999999998877765433200 01 12468889999998766543
Q ss_pred -HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 331 -FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 331 -~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
..|+ +++.|+.++++.+|+++|++.+.+ .+.+|..++.++.+|.+.|+++|.++|+++|+|++| +++.
T Consensus 109 ~~~G~---~v~~v~~~~~~~~d~~~l~~~l~~------~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~ 179 (353)
T TIGR03235 109 ERNGF---TVTYLPVDESGRIDVDELADAIRP------DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVV 179 (353)
T ss_pred HhcCC---EEEEEccCCCCcCCHHHHHHhCCC------CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhc
Confidence 4577 999999998899999999988753 356788899999999999999999999999999999 5444
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
+....+ .. +.++|++++++|||+ +|.|+|+++++++..... ...+ ++..... . .
T Consensus 180 g~~~~~---------~~----~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~~--~~~~-~~~~~~~--------~-~ 233 (353)
T TIGR03235 180 GKITVD---------LS----ADRIDLISCSGHKIY-GPKGIGALVIRKRGKPKA--PLKP-IMFGGGQ--------E-R 233 (353)
T ss_pred CCcccc---------cc----ccCCCEEEeehhhcC-CCCceEEEEEccCccccc--ccCc-eeeCCCC--------c-C
Confidence 333221 11 225999999999995 599999999998632111 1111 2211100 0 1
Q ss_pred cCCCC-CCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC--CCceEEEEEe
Q psy1785 488 HIQCG-RKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE--PECTNISFWY 552 (629)
Q Consensus 488 ~~~~s-r~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~--p~~~~v~F~~ 552 (629)
.++.+ ... ..+.+..+++.+ .+|.+++.++..++++++++.|++ +|++++.++ ....+++|.+
T Consensus 234 ~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~ 300 (353)
T TIGR03235 234 GLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSI 300 (353)
T ss_pred ccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEe
Confidence 11222 222 345555666654 368889999999999999999988 799988621 2245677764
No 63
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.80 E-value=1.2e-16 Score=171.79 Aligned_cols=308 Identities=16% Similarity=0.216 Sum_probs=201.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++++|.+ ...+++|+++++..++.+... |...|+++...|+|+..+++..|. ++
T Consensus 54 ~~~~e~lA~~~g~~--~~~i~~g~~~a~~~~~~~l~~--------------~gd~Vl~~~~~h~s~~~~~~~~g~---~~ 114 (370)
T TIGR02539 54 HDFLEDLAEFLGMD--EARVTHGAREGKFAVMHALCK--------------EGDWVVLDGLAHYTSYVAAERAGL---NV 114 (370)
T ss_pred HHHHHHHHHHhCCC--ceEEECChHHHHHHHHHHhhC--------------CCCEEEECCcccHHHHHHHHHcCC---EE
Confidence 45566799999987 467889999998766554321 344677888999999998899998 99
Q ss_pred EEEecCC--CCCCCHHHHHHHHHHHHhCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 340 YLIKTDA--RGRMLPESLRGEIQRTLAEG-AVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ~~V~~d~--~g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+.+|.++ ++.+|+++|+++|.+..+++ ..+.+|+.+..++.+|.+.|+++|.++|+++|++++| |++.+.+...
T Consensus 115 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~- 193 (370)
T TIGR02539 115 KEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVS- 193 (370)
T ss_pred EEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCC-
Confidence 9999863 57899999999997533221 2456777788889999999999999999999999999 6654322111
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
. ...++|.++.++||+++.+.++|+++.++ +.+........+|....- ..+..+..
T Consensus 194 --------~----~~~~~di~v~s~sK~~~~~g~~G~l~~~~-~~i~~l~~~~~~~~~~~~-----------~~~~~~~~ 249 (370)
T TIGR02539 194 --------A----KEIGADFIVGSGHKSMAASGPCGVLGMSE-EWEDIVLRKSRYSPVKEV-----------ELLGCTSR 249 (370)
T ss_pred --------H----HHcCCCEEEeeCcccccCCCCEEEEEECH-HHHhhhcccccCCcccee-----------eeeccccc
Confidence 1 12248999999999999777789888765 444433222222222110 00111111
Q ss_pred -cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 495 -PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 495 -~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
..+..++.++... .+.+ +..++..+++++|++.|+++ |++++.. ++..+.+.|+. | .... .. ....+
T Consensus 250 ~~~~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~-~-~~~~-----~~-~~~~~ 318 (370)
T TIGR02539 250 GAPIVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFET-P-GFHE-----IA-QKHKR 318 (370)
T ss_pred ccHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEEC-C-chhH-----Hh-hhhcc
Confidence 2344444444321 2222 23445566788999999997 8987531 34556666653 2 1100 00 00001
Q ss_pred HHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
....+.++|.++|.+.+.. +..++||++++ ..|++|++++++.|+++.++
T Consensus 319 ~~~~~~~~L~e~GI~~ir~----~~~~~iRis~~--~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 319 RGYFLYEELKKRGIHGIRS----GQTKYFKLSVY--GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred ccHHHHHHHHhCCCccccC----CcceEEEEEec--CCCHHHHHHHHHHHHHHHHh
Confidence 1235788898999642221 22358999984 45999999999999988764
No 64
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.79 E-value=4.8e-17 Score=158.20 Aligned_cols=311 Identities=17% Similarity=0.252 Sum_probs=218.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
+..+..+++++|++ ...+|.|+-++-+.+|.+... +...|+..+.+||+..-||...|+ +|
T Consensus 64 ~~F~~dlaeFlg~D--~~R~t~GARe~KfavMhal~~--------------~gd~vV~D~~aHYttyvAAEragl---~v 124 (382)
T COG1103 64 KDFLEDLAEFLGMD--EVRVTAGAREAKFAVMHALCK--------------EGDWVVVDSLAHYTTYVAAERAGL---NV 124 (382)
T ss_pred HHHHHHHHHHhCCc--eeeecccchhhHHHHHHHhcc--------------CCCEEEEcCcchHHHHHHHHhcCC---eE
Confidence 55566699999997 478999999988766654332 345677899999999999999999 99
Q ss_pred EEEecC--CCCCCCHHHHHHHHHHHHhCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 340 YLIKTD--ARGRMLPESLRGEIQRTLAEG-AVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ~~V~~d--~~g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
..||.. ++.+++++...+.|++..+++ ..|.+...|+....+|.+.|...++++|+++|+++.+ ||.-+-+...
T Consensus 125 ~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs- 203 (382)
T COG1103 125 AEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVS- 203 (382)
T ss_pred EecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeecccccc-
Confidence 999954 457899999999999998886 5688899999999999999999999999999999988 7766555322
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
+.+.|+|+++.++||.+.+.-.||++.++.. +....+..+-.+.....- -.+.|+-|
T Consensus 204 ------------~ke~g~DFiVgSGHKsmAAs~PiGvl~~~eE-~ae~V~r~Sg~~~~~KEv----------ellGCT~r 260 (382)
T COG1103 204 ------------GKEIGADFIVGSGHKSMAASAPIGVLAMSEE-WAEIVLRRSGRAFPKKEV----------ELLGCTVR 260 (382)
T ss_pred ------------ccccCCCEEEecCccchhccCCeeEEeehhH-HHHHHHhhccccccccee----------eeeccccc
Confidence 2355899999999999999999999999874 444333322111111110 13457755
Q ss_pred cc-hHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhH
Q psy1785 495 PD-VLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKV 573 (629)
Q Consensus 495 ~~-al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~ 573 (629)
.. ...+.+++-.. .+- -++++...+.+++|.+.|+++.|++.+...|.-..+.|.-.| .. .+..++..+-
T Consensus 261 GapivTlmASfP~V-~eR-VkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp-~f------~eIakk~~r~ 331 (382)
T COG1103 261 GAPIVTLMASFPHV-VER-VKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETP-VF------HEIAKKHKRK 331 (382)
T ss_pred CchHHHHHhcCHHH-HHH-HHHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCc-hH------HHHHHhCcCC
Confidence 43 33333332221 222 235677888999999999999889888744544333332222 10 1111111111
Q ss_pred HHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 574 APKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 574 ~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
-.-+++.|.++|..-| + .|.-.+|.+++ ...+.|+++++++++++++++
T Consensus 332 gyFlY~ELK~RgI~GI--~--~G~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 332 GYFLYEELKKRGIHGI--Q--PGQTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred ceeeHHHHHhcCcccc--c--cCceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence 1235677778875322 2 24445799998 789999999999999998764
No 65
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.77 E-value=2.8e-16 Score=162.50 Aligned_cols=373 Identities=18% Similarity=0.220 Sum_probs=244.2
Q ss_pred CCHHHHHHHHHHHhcccccCCCCcc-ccccCCCCChHHHHHHHH----HHhcCCCccccc-cChhHHHHHHHHHHHHHHH
Q psy1785 196 SSHAKLIDLMKTVIQYSVKTGHPYF-VNQLFSSVDPYGLVGQWL----ADALNPSVYTYE-VSPVFSLMEEHVLAQMRTI 269 (629)
Q Consensus 196 ~~~~~il~~l~~~~~~~~~~~~p~~-~g~~~s~~~~~~~~~~~l----t~~~n~~~~~~~-~~p~~~~~E~~~~~~l~~l 269 (629)
.+|-++++++.++-+.+.......+ .|- +..- ++-..+.. ..+.|..+++.+ ..+...++-.++.+|++++
T Consensus 45 ~SE~e~~Rh~~rLs~kn~avd~~m~PLGS--CTMK-~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L~~I 121 (496)
T COG1003 45 HSETEMVRHYTRLSQKDLAVDRGMIPLGS--CTMK-LNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWLKEI 121 (496)
T ss_pred ccHHHHHHHHHHHHhcccccccCccCCcc--cccc-cCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHHHHh
Confidence 5899999999988766533322111 111 0100 11111111 223444555543 4677788889999999999
Q ss_pred hCCCCCCeEEeC-CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCC
Q psy1785 270 VGFQGGDGIFCP-GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARG 348 (629)
Q Consensus 270 ~G~~~~~g~~~~-GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g 348 (629)
.|++. ..+.+ .|+.+-+++++..|... +. +|- ..+-+|++..++|-...-.|.+.|+ +|+.|++|++|
T Consensus 122 TG~Da--vsLQP~AGAqGE~aGll~Ir~YH--e~--rG~--~~R~~~LIP~SAHGTNPASAam~G~---~VV~V~~~~~G 190 (496)
T COG1003 122 TGMDA--VSLQPNAGAQGEYAGLLAIRAYH--ES--RGE--GHRNICLIPDSAHGTNPASAAMAGF---KVVVVKCDENG 190 (496)
T ss_pred cCCce--eeccCCCCcchhhHHHHHHHHHH--HH--cCC--CcCcEEEeeccccCCChhhHhhcCc---eEEEEecCCCC
Confidence 99984 34443 56677788888777542 22 332 2466889999999999999999999 99999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHcCCeEEE-e--cCcccccccccccccccccc
Q psy1785 349 RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF-DPIPAIADICAEYDMADSV-T--WNPHKLLTAPQQCSVFLTRR 424 (629)
Q Consensus 349 ~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i-dpl~ei~~i~~~~~~~lhV-A--~gg~~l~~~~~~~~~~l~~~ 424 (629)
.+|+++|++++.+ ..-.+..|..+|. |.+ .+|.||+++.+++|-.+.. . .++.+-...|
T Consensus 191 ~VDlddLk~k~~~------~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP---------- 253 (496)
T COG1003 191 NVDLDDLRAKAED------NLAALMITNPSTL-GVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARP---------- 253 (496)
T ss_pred CccHHHHHHHhcc------ceeEEEeccCccc-ccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccc----------
Confidence 9999999999985 3446777776665 555 6899999999999999888 2 3433222221
Q ss_pred ccccCCcceEEEeCCCCCCCCCCc-----cEEEEEeccchhhhhhcCCCCccccC-----CcCCCcccCCCCccCCCCCC
Q psy1785 425 NYVIEVVADSVTWNPHKLLTAPQQ-----CSVFLTRHQSVLTECHSASASYLFQK-----DKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 425 ~~~i~~gaDsv~~~~HK~l~~P~~-----~g~ll~r~~~~l~~~~~~~~~yl~~~-----~~~~~~~~~~~~~~~~~sr~ 494 (629)
-+.|+|.+.+|.||.+..|-| .|-+-+|.. + ++||... ...|...++.. +++.-++.
T Consensus 254 ---Gd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L-------~pfLP~p~~~~~~~~y~~~~~~~-~s~g~~~a 320 (496)
T COG1003 254 ---GDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--L-------APFLPGPVVYHDVGEYRLDYDGK-KSIGVSAA 320 (496)
T ss_pred ---cccccceEEeecccccccCCCCCCCCCCceehHhh--c-------cccCCCCcccCCCccccccCCCC-ccceeecc
Confidence 134799999999999988876 455555542 2 2344431 11111111111 22222222
Q ss_pred -----cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC---ceEEEEEeeCCCCCCCCchhhH
Q psy1785 495 -----PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE---CTNISFWYIPPSLRGKEDQADF 566 (629)
Q Consensus 495 -----~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~---~~~v~F~~~p~~~~~~~~~~~~ 566 (629)
.-....|++++.+|.+|+++.-+..+-+|+|+.++|+. .+++.. .+. -..+.+...|-
T Consensus 321 ~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y-~~~~~~~HE~ild~r~l----------- 386 (496)
T COG1003 321 PYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPY-TGENRVAHECILDARPL----------- 386 (496)
T ss_pred ccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCcccc-CCCCcceeEEEeechHh-----------
Confidence 13468899999999999999999999999999999986 577755 333 45555544321
Q ss_pred HHHHhhHHHHHHHHHHhcCcEEEe-eeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 567 NELLHKVAPKIKERMMKSGSMMIT-YQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 567 ~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+...--+..+.+||+..|.--.+ +.|+.- ...+-+=.+ +.-+++++|++++++.++.++
T Consensus 387 ~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV-~~tLMIEPT-EsEsk~eLDrf~dami~I~~E 447 (496)
T COG1003 387 KKETGVRALDVAKRLLDYGFHAPTMYFPLIV-AGTLMIEPT-ESESKEELDRFIDAMIAIREE 447 (496)
T ss_pred HhhcCCcHHHHHHHHHhcCCCCCcccCcccc-ccceeecCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 111111234678899999942111 223111 135666676 888999999999999888654
No 66
>KOG0629|consensus
Probab=99.76 E-value=1.4e-18 Score=178.44 Aligned_cols=191 Identities=20% Similarity=0.209 Sum_probs=135.7
Q ss_pred CCCCCCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCc----cccccChhHHHH---HHHHHH
Q psy1785 192 NAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSV----YTYEVSPVFSLM---EEHVLA 264 (629)
Q Consensus 192 p~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~----~~~~~~p~~~~~---E~~~~~ 264 (629)
|--...+.+|+..+++++.++.. -.|++..+.+..++-+-..+.+-+-.. +....-|..... ....+.
T Consensus 137 PvF~lmE~~vl~km~~ivGw~~~-----~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ 211 (510)
T KOG0629|consen 137 PVFVLMEEEVLAKMREIVGWEEG-----GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK 211 (510)
T ss_pred ceEEeehHHHHHHHHHHhCCCCC-----CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence 33346889999999999977643 235555566666655544554433111 111122322222 234578
Q ss_pred HHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec
Q psy1785 265 QMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT 344 (629)
Q Consensus 265 ~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~ 344 (629)
+.+.++|+...+.+.+. |.-...++...+++.+-+.|++|. .|.+|..|++++ ++|
T Consensus 212 kaAa~lg~gtd~c~~v~--t~e~Gkm~~~dLe~kile~k~kg~--~Pf~vnaTaGTT---------V~G----------- 267 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVK--TDERGKMIPDDLEKKILEAKAKGG--VPFFVNATAGTT---------VLG----------- 267 (510)
T ss_pred HHHHHhccCCceeEEec--ccccCccchHHHHHHHHHHHhcCC--CCeEEEecCCce---------eee-----------
Confidence 89999999876666655 554556677888888888889985 689999999997 222
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccccc
Q psy1785 345 DARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 345 d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~ 422 (629)
..| +| ..|++.|++++.|+||+++||+....+ ...+....+.+...+|+|++|+++..|+|||.++.
T Consensus 268 ----AFD--dL-~~iadiC~k~~lWmHvDAAwGGglLmS----~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~ 334 (510)
T KOG0629|consen 268 ----AFD--DL-NGIADICEKHKLWMHVDAAWGGGLLMS----RKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLT 334 (510)
T ss_pred ----ccC--cH-HHHHHHHHhcCEEEEeecccccccccC----hhhHhhccCccccCceeecHHHhhcCcchhhHHHH
Confidence 334 33 556667888999999999999999888 77788888888899999999999999999999764
No 67
>PLN02721 threonine aldolase
Probab=99.75 E-value=3.7e-16 Score=166.57 Aligned_cols=298 Identities=14% Similarity=0.194 Sum_probs=185.4
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH---HHHHcCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK---LAAFEGLGS 336 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k---aa~~lGlg~ 336 (629)
.++.+.+++++|.+ .+.++++||++++.++.+.... |...|+++..+|+++.+ .+...|+
T Consensus 43 ~~l~~~la~~~~~~--~~~~~~~Gs~a~~~~l~~~~~~-------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~-- 105 (353)
T PLN02721 43 LRLEEEMAKIFGKE--AALFVPSGTMGNLISVLVHCDV-------------RGSEVILGDNSHIHLYENGGISTLGGV-- 105 (353)
T ss_pred HHHHHHHHHHhCCc--eeEEecCccHHHHHHHHHHccC-------------CCCeEEEcCccceehhcccchhhhcCc--
Confidence 44455678888875 3788999999988676654321 34457788899998887 4667787
Q ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CCcEEEEEeeC-CCcccccc---CHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 337 DNVYLIKTDARGRMLPESLRGEIQRTLAEG-AVPFMVSATSG-TTVLGAFD---PIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 337 ~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~G-tt~~G~id---pl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
+++.+|.++++.+|+++|++.|.+....+ ..+.+|+.+.- ++.+|.+- ++++|.++|+++|+++++ |+....
T Consensus 106 -~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~ 184 (353)
T PLN02721 106 -HPRTVKNNEDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNA 184 (353)
T ss_pred -eeEecCCCcCCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcc
Confidence 99999999899999999999997432111 23445555443 34456654 488999999999999999 432111
Q ss_pred cccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccC
Q psy1785 410 LLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHI 489 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 489 (629)
.... +. .... ..+. +|++++++||+++.|.| .+++.++++...... +... +..
T Consensus 185 ~~~~--~~----~~~~-~~~~-~d~~~~s~sK~l~~~~G--~~~~~~~~~~~~~~~-----~~~~---~~~--------- 237 (353)
T PLN02721 185 SVAL--GV----PVHR-LVKA-ADSVSVCLSKGLGAPVG--SVIVGSKSFIRKAKR-----LRKT---LGG--------- 237 (353)
T ss_pred hhhh--CC----CHHH-Hhhh-CCEEEEecccccCCcee--eEEecCHHHHHhHHH-----HHHh---cCC---------
Confidence 1000 00 0001 1234 99999999999998754 445555555443211 1100 000
Q ss_pred CCCCCcc--hHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEE-EccCCCceEEEEEeeCCCCCCCCchhhH
Q psy1785 490 QCGRKPD--VLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKL-VLDEPECTNISFWYIPPSLRGKEDQADF 566 (629)
Q Consensus 490 ~~sr~~~--al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l-~~~~p~~~~v~F~~~p~~~~~~~~~~~~ 566 (629)
..+... +...+.+++ ...+.+++..++++++.+.|++++++++ +. +|..+.+.|+..+ .. +.
T Consensus 238 -~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~~~~~~~~-~~-~~------ 302 (353)
T PLN02721 238 -GMRQVGVLAAAALVALQ-----ENVPKLEDDHKKAKLLAEGLNQIKGLRVNVA-AVETNIVYFDITD-GS-RI------ 302 (353)
T ss_pred -CeehhHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhCCCcEEecC-CccceEEEEEccC-Cc-cc------
Confidence 000111 111112221 1222345556788999999999988876 44 5666666666532 10 00
Q ss_pred HHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 567 NELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 567 ~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
-...+.++|.++|..... . ..+++|++++ ..++++||+++++.|+++...|
T Consensus 303 ------~~~~~~~~L~~~gi~v~~---~--~~~~lR~~~~-~~~~~~~i~~~~~~l~~~~~~~ 353 (353)
T PLN02721 303 ------TAEKLCKSLEEHGVLLMP---G--NSSRIRVVTH-HQISDSDVQYTLSCFQQAALTL 353 (353)
T ss_pred ------cHHHHHHHHHhCCcEEec---C--CCceEEEEec-CcCCHHHHHHHHHHHHHHhhcC
Confidence 013578888888865422 2 2358999995 8999999999999999876543
No 68
>PLN02590 probable tyrosine decarboxylase
Probab=99.75 E-value=5.8e-18 Score=187.58 Aligned_cols=253 Identities=16% Similarity=0.066 Sum_probs=189.9
Q ss_pred CCCCCChhHHHHHHHH-HhhcccccCCcccccccccccccCCCCHHHHHHhhcc------CCCCCCCCHHHHHHHHHHHh
Q psy1785 137 NAGPSSHGKLIDLMKT-VIQYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLEL------GFNAGPSSHAKLIDLMKTVI 209 (629)
Q Consensus 137 p~~~~~~~~ll~~~~~-~l~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~------~lp~~~~~~~~il~~l~~~~ 209 (629)
|++|++.+++++++.+ ++++.++++||+||+++++++..+.+..+.|.+.++. ..|...+.|.++++|+.+++
T Consensus 104 P~~g~~~~~il~~~~~~i~p~~~~~~hP~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~ 183 (539)
T PLN02590 104 PERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLL 183 (539)
T ss_pred CCCCCCHHHHHHHHHHHHhccCCcCCCCCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHh
Confidence 5779999999999975 6699999999999999999999999999999998872 35555568899999999999
Q ss_pred cccccCC-CCccccccCCCCChHHHHHHHHHHhcC-CCccccccChhHHHH---HHHHHHHHHHHhCCCCCCeEEeCCch
Q psy1785 210 QYSVKTG-HPYFVNQLFSSVDPYGLVGQWLADALN-PSVYTYEVSPVFSLM---EEHVLAQMRTIVGFQGGDGIFCPGGS 284 (629)
Q Consensus 210 ~~~~~~~-~p~~~g~~~s~~~~~~~~~~~lt~~~n-~~~~~~~~~p~~~~~---E~~~~~~l~~l~G~~~~~g~~~~GgT 284 (629)
+.+..+. +....|.+.++.+...+.+-+.+...- .........+.+.+. -+..+++.++++|+.......++...
T Consensus 184 glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~ 263 (539)
T PLN02590 184 QLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDS 263 (539)
T ss_pred CCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCC
Confidence 7763321 122457888999988888855544310 000001111111111 14567889999999876666666443
Q ss_pred hhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHh
Q psy1785 285 MANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLA 364 (629)
Q Consensus 285 ~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~ 364 (629)
..+..+...++++++.+++++|. .|.+||.+.+++ ..|.+|+ | ++|.+.++
T Consensus 264 ~~~~~md~~~L~~~I~~d~~~g~--~P~~VvaTaGTT------------------------~tGaiDp--l-~~Ia~i~~ 314 (539)
T PLN02590 264 STNYGMPPESLEEAISHDLAKGF--IPFFICATVGTT------------------------SSAAVDP--L-VPLGNIAK 314 (539)
T ss_pred CCCCcCCHHHHHHHHHHHHhcCC--CcEEEEEEeCCC------------------------CCcccCC--H-HHHHHHHH
Confidence 34566777778888888888885 689999999998 3455552 3 56666777
Q ss_pred CCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccccc
Q psy1785 365 EGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 365 ~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~ 422 (629)
+...|+||++++|+....+ ++.+++.++.+..+++++++|+|+..|++|++++.
T Consensus 315 ~~g~WlHVDaA~GG~al~~----~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llv 368 (539)
T PLN02590 315 KYGIWLHVDAAYAGNACIC----PEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWV 368 (539)
T ss_pred HhCCeEEEecchhhhhhcC----hhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEe
Confidence 7789999999999998765 78888888888899999999999999999998763
No 69
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.74 E-value=2e-16 Score=169.10 Aligned_cols=313 Identities=15% Similarity=0.109 Sum_probs=197.2
Q ss_pred CCCccccccC---hhHHHHHHHHHHHHHHHhCCC-CCCeEEeCC-chhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEE
Q psy1785 243 NPSVYTYEVS---PVFSLMEEHVLAQMRTIVGFQ-GGDGIFCPG-GSMANGYAISCARHHAFPQIKTQGLASCPRLVLYT 317 (629)
Q Consensus 243 n~~~~~~~~~---p~~~~~E~~~~~~l~~l~G~~-~~~g~~~~G-gT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~ 317 (629)
|.....+..+ +.+..+-.++++.+++++|.+ +...+|++| +|+++..++..-.. .| .+..+|++
T Consensus 27 ~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~--------~~---~~~~~i~~ 95 (355)
T cd00611 27 GLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLG--------DK---GTADYVVT 95 (355)
T ss_pred cCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCC--------CC---CeEEEEEC
Confidence 3333344444 677788899999999999985 467999988 88886655543211 11 24456666
Q ss_pred cCCcchHHHHHHHHcCCCCCCEEEEecCCCCCC-CHHHHH-HHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH
Q psy1785 318 SEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRM-LPESLR-GEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA 395 (629)
Q Consensus 318 s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~-d~~~Le-~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~ 395 (629)
....|.+ .+.++..|+ +++.++++++|.. ++.+++ ..+. ..+-+|..++.+|.+|.+ ++ ++++
T Consensus 96 g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~lV~~~h~~t~tG~~--~~---~i~~ 160 (355)
T cd00611 96 GAWSAKA-AKEAKRYGG---VVVIVAAKEEGKYTKIPDVETWDLA------PDAAYVHYCSNETIHGVE--FD---EVPD 160 (355)
T ss_pred CHHHHHH-HHHHHhcCC---CcEEEecccccCCCCCCCHhhcCCC------CCCCEEEEeCCcccccEE--cc---eecc
Confidence 5555444 345677788 9999998766533 422222 2222 235579999999999997 22 4455
Q ss_pred HcCCeEEE-ec-CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCcccc
Q psy1785 396 EYDMADSV-TW-NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQ 473 (629)
Q Consensus 396 ~~~~~lhV-A~-gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~ 473 (629)
.+|+.+.| +. ..+....+ ++. .|.+..++||++| |.|.|++++|++ .+.+.....+.+...
T Consensus 161 ~~g~~~~VDa~qs~g~~~id--------------v~~-~~~~~ss~~K~lG-P~G~g~l~~~~~-~~~~~~~~~~~~~~~ 223 (355)
T cd00611 161 TGGVPLVADMSSNILSRPID--------------VSK-FGVIYAGAQKNLG-PAGVTVVIVRKD-LLGKARKITPSMLNY 223 (355)
T ss_pred cCCCeEEEEccccccCCCCC--------------HHH-hCEEEeecccccC-CCceEEEEECHH-HHhhcccCCCCcccH
Confidence 69999988 22 11111111 222 4545566999886 999999999885 333321111112100
Q ss_pred CCcCCCcccCCCCccCCCCCC--cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcE-EEcc-CCCc-eE
Q psy1785 474 KDKFYDTKYDSGDKHIQCGRK--PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFK-LVLD-EPEC-TN 547 (629)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~sr~--~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~-l~~~-~p~~-~~ 547 (629)
. ...+... + .+.+ ...+.+..+++.+-.+ |++++.++..++++++++.|+++||+. ...+ .... .+
T Consensus 224 ~-----~~~~~~~-~--~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v 295 (355)
T cd00611 224 K-----THADNNS-L--YNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMN 295 (355)
T ss_pred H-----HHHhcCC-C--CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCceE
Confidence 0 0000000 0 1222 2567888889988888 799999999999999999999998863 2221 1134 45
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
++|.+... .+ ..++.+.+.++|.. .+.... ..+.+|+++. +++|++|||+|+++|+++.
T Consensus 296 vsf~~~~~-------------~l---~~~~~~~~~r~G~~--~~~~~~-~~g~vR~S~~-~~nt~edi~~l~~al~~~~ 354 (355)
T cd00611 296 VPFRLGKE-------------EL---EKEFLKEAEAAGMI--GLKGHR-SVGGIRASIY-NALSLEGVQALADFMKEFQ 354 (355)
T ss_pred EEEEcCCh-------------hh---hHHHHHHHHHCCCc--ccCCCc-ccCeEEEEcc-CCCCHHHHHHHHHHHHHHh
Confidence 88885321 01 12444677888964 322221 2358999996 9999999999999999864
No 70
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.73 E-value=2.8e-16 Score=166.48 Aligned_cols=294 Identities=16% Similarity=0.179 Sum_probs=185.4
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH---HHHHcCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK---LAAFEGLGS 336 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k---aa~~lGlg~ 336 (629)
.++.+++++++| ..+.++++|||+++..++.+... |...|+++..+|+++.+ .+.+.|+
T Consensus 35 ~~l~~~~a~~~g--~~~~~~~~~gt~a~~~~~~~l~~--------------~gd~v~~~~~~~~~~~~~~~~~~~~g~-- 96 (338)
T cd06502 35 AKLEARAAELFG--KEAALFVPSGTAANQLALAAHTQ--------------PGGSVICHETAHIYTDEAGAPEFLSGV-- 96 (338)
T ss_pred HHHHHHHHHHhC--CCeEEEecCchHHHHHHHHHhcC--------------CCCeEEEecCcceeeecCCcHHHHcCc--
Confidence 555678899999 45789999999987766654321 34457788899988665 3456787
Q ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHhCC-CCcEEEEEeeCCCccc---cccCHHHHHHHHHHcCCeEEE--ecCcccc
Q psy1785 337 DNVYLIKTDARGRMLPESLRGEIQRTLAEG-AVPFMVSATSGTTVLG---AFDPIPAIADICAEYDMADSV--TWNPHKL 410 (629)
Q Consensus 337 ~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G---~idpl~ei~~i~~~~~~~lhV--A~gg~~l 410 (629)
+++.++.+. +.+|+++|++++.+..+.+ ..+.+|+.+..++ .| ..+++++|.++|+++|++++| |+.....
T Consensus 97 -~~~~v~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n-~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~ 173 (338)
T cd06502 97 -KLLPVPGEN-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE-GGTVYPLDELKAISALAKENGLPLHLDGARLANAA 173 (338)
T ss_pred -eEEeecCCC-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecC-CccccCHHHHHHHHHHHHHcCCeEeechHHHHHHH
Confidence 899999865 7899999999886421111 1344565555444 45 457888999999999999999 5532211
Q ss_pred ccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCC
Q psy1785 411 LTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 490 (629)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 490 (629)
... .++ + . ....++|+++.++||+++.|. |.+++.+++...........+ .
T Consensus 174 ~~~--~~~-~---~--~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~-------------------~ 224 (338)
T cd06502 174 AAL--GVA-L---K--TYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQA-------------------G 224 (338)
T ss_pred Hhc--CCC-H---H--HHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHh-------------------C
Confidence 111 000 0 0 011248999999999999885 345555555544321111000 0
Q ss_pred CCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 491 CGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 491 ~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
.+.+...+..+.++..+...++.+++++..++++++.+.|++. ++.+ . ++..+.++++.... ......+
T Consensus 225 ~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~-~~~~~~~~v~~~~~--------~~~~~~l 293 (338)
T cd06502 225 GGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-S-EVQTNIVLLDPVEA--------NAVFVEL 293 (338)
T ss_pred CChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-c-cccCCeEEEecCCc--------cHHHHHH
Confidence 0111223344455555555678888899999999999999987 5643 3 46677777765211 0111111
Q ss_pred hhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 571 HKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 571 ~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
..++.+. .++|..+ .. ... +++|+++. ..+|++|++.+++.+++
T Consensus 294 ---~~~l~~~-~~~gi~~-~~--~~~--~~lRi~~~-~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 294 ---SKEAIER-RGEGVLF-YA--WGE--GGVRFVTH-WDTTEEDVDELLSALKA 337 (338)
T ss_pred ---HHHHHHh-hhCCEEE-Ee--cCC--CeEEEEee-cCCCHHHHHHHHHHHhc
Confidence 1122222 3567543 22 222 58999995 99999999999998865
No 71
>KOG1368|consensus
Probab=99.73 E-value=2.5e-16 Score=155.23 Aligned_cols=303 Identities=17% Similarity=0.230 Sum_probs=207.5
Q ss_pred cccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 247 YTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 247 ~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
..|+..|-+..+|.+ +++++|-+ .|.|+++||++|+.+++....+ |...|++...+|.-.+
T Consensus 50 dVyGeD~tt~rLE~~----vA~l~GKE--AgLFv~SGTmgNllaIm~Hc~~-------------rg~eii~gd~~HI~~~ 110 (384)
T KOG1368|consen 50 DVYGEDPTTNRLEQR----VAELFGKE--AGLFVPSGTMGNLLAIMVHCHQ-------------RGSEIIVGDRAHIHRY 110 (384)
T ss_pred ccccCCccHHHHHHH----HHHHhCcc--ceeeecccccccHHHHHHHhcC-------------CCceEEeccchheeeh
Confidence 346778888888887 56777754 5899999999999999988764 4557889999998888
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHH-hC-CCCcEEEEEeeCCCc-cccccCHH---HHHHHHHHcCCe
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTL-AE-GAVPFMVSATSGTTV-LGAFDPIP---AIADICAEYDMA 400 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~-~~-g~~~~~Vvat~Gtt~-~G~idpl~---ei~~i~~~~~~~ 400 (629)
+.+.+.-++.-.++.|...++|.||++++|++|.... +- +..+-+|+.----+. -|.+-||+ ++.++|+++|+.
T Consensus 111 E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glk 190 (384)
T KOG1368|consen 111 EQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLK 190 (384)
T ss_pred hccChhhhccceeEeeeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCe
Confidence 7766555554599999999999999999999997422 11 122334444332222 34666665 556689999999
Q ss_pred EEE----ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 401 DSV----TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 401 lhV----A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
+|+ -|++......|. +.. .+. +||+++...|.|++|.| -+++.++.++.++. +++
T Consensus 191 LH~DGARi~NAavasgV~v--------k~i-~~~-fDSVsiCLSKglgAPVG--SViVG~k~FI~kA~-----~~R---- 249 (384)
T KOG1368|consen 191 LHMDGARIFNAAVASGVPV--------KKI-CSA-FDSVSICLSKGLGAPVG--SVIVGSKDFIDKAR-----HFR---- 249 (384)
T ss_pred eecchhhhhhHHHHcCCCH--------HHH-HHh-hhhhhhhhhccCCCCcc--cEEEccHHHHHHHH-----HHH----
Confidence 999 488877654421 110 233 99999999999999965 47788877776642 222
Q ss_pred CCCcccCCCCccCCCC-CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCC
Q psy1785 477 FYDTKYDSGDKHIQCG-RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPP 555 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~s-r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~ 555 (629)
+.+.+| |+...++... +-++ .+.+. .++..++.|+.|++.+.+.+++++-.+..+.+++...+..+
T Consensus 250 ----------KalGGGmRQsGvLaaaa-Lval-~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~ 316 (384)
T KOG1368|consen 250 ----------KALGGGMRQSGVLAAAA-LVAL-DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQA 316 (384)
T ss_pred ----------HHhcCchhHHHHHHHHH-HHHh-hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecccc
Confidence 122334 4444443322 2222 23333 66778888999999998887788765225666665544333
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.+. ..++.+.+.+.|...+.... .-+|+++ |+..|.+++++++..++
T Consensus 317 ~~~---------------~~~l~~~~~k~gi~lm~~~s-----~r~Rivl-h~Qvt~~~ve~~~~~~~ 363 (384)
T KOG1368|consen 317 RLT---------------AEELCKFLEKNGILLMGGAS-----RRIRIVL-HHQVTDEDVEYVKSVLS 363 (384)
T ss_pred cCC---------------HHHHHHHHHHCCeEEeeccc-----cceEEEE-EEecCHHHHHHHHHHHH
Confidence 322 13567788889987665322 2389999 59999999999999984
No 72
>KOG2862|consensus
Probab=99.72 E-value=6.2e-15 Score=146.37 Aligned_cols=328 Identities=15% Similarity=0.178 Sum_probs=227.7
Q ss_pred HHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCC-eEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEE
Q psy1785 238 LADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGD-GIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLY 316 (629)
Q Consensus 238 lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~-g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~ 316 (629)
+..+++.+... ..+|.+.++-.++.+-+...|-..++. -.+...|+.+...|+. +.+ +.| .+.+++
T Consensus 32 V~~A~~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~----N~l----ePg----d~vLv~ 98 (385)
T KOG2862|consen 32 VQEAMSRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALV----NLL----EPG----DNVLVV 98 (385)
T ss_pred HHHhhcCCccc-cCCHHHHHHHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHH----hhc----CCC----CeEEEE
Confidence 44555555443 368999999999999999999776643 2333344444433333 222 123 234444
Q ss_pred EcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC-HHHHHHHHH
Q psy1785 317 TSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP-IPAIADICA 395 (629)
Q Consensus 317 ~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp-l~ei~~i~~ 395 (629)
..++---.+...++.+|+ +|..|+.+..+...++.+++++.+ +.|..|..++|.|.+|..+| +..+.++||
T Consensus 99 ~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~~~~le~i~~~lsq-----h~p~~vfv~hgdsSTgV~q~~~~~~g~lc~ 170 (385)
T KOG2862|consen 99 STGTWGQRAADCARRYGA---EVDVVEADIGQAVPLEEITEKLSQ-----HKPKAVFVTHGDSSTGVLQDLLAISGELCH 170 (385)
T ss_pred EechHHHHHHHHHHhhCc---eeeEEecCcccCccHHHHHHHHHh-----cCCceEEEEecCccccccchHHHHHHHHhh
Confidence 444444456677888999 999999998889999999999987 47889999999999999999 777788999
Q ss_pred HcCCeEEE----ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC---C
Q psy1785 396 EYDMADSV----TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS---A 468 (629)
Q Consensus 396 ~~~~~lhV----A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~---~ 468 (629)
+|+..+.| ..|+.-+..+ ++|+|......+|.|++|.|.+.+...++ .+.+..... .
T Consensus 171 k~~~lllVD~VaSlggt~F~mD---------------ewgVDvaytgSQKaL~aP~GLsiisfS~k-a~~~~~~rK~~~~ 234 (385)
T KOG2862|consen 171 KHEALLLVDTVASLGGTEFEMD---------------EWGVDVAYTGSQKALGAPAGLSIISFSDK-ALEAIRDRKTKPV 234 (385)
T ss_pred cCCeEEEEechhhcCCccceeh---------------hhcccEEEecchhhcCCCCCcceeecCHH-HHHHHhhccCCce
Confidence 99999999 4565544333 56899999999999999999999776664 333322211 1
Q ss_pred CccccCCcCCCcccCCCCccCCCC---CCc-------chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEE
Q psy1785 469 SYLFQKDKFYDTKYDSGDKHIQCG---RKP-------DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKL 538 (629)
Q Consensus 469 ~yl~~~~~~~~~~~~~~~~~~~~s---r~~-------~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l 538 (629)
.|.|.- .+++.+. .|. |.. -...+-.+|+.+-.+|+++.++++.+++++|+..|++. |+++
T Consensus 235 ~~yFd~-------~~~~~~w-gc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~ 305 (385)
T KOG2862|consen 235 SFYFDI-------LRLGNFW-GCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQL 305 (385)
T ss_pred EEEEeH-------Hhhcchh-ccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-Cccc
Confidence 222211 1122111 121 221 24566678888889999999999999999999999997 9888
Q ss_pred Ecc--CCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHH
Q psy1785 539 VLD--EPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMD 616 (629)
Q Consensus 539 ~~~--~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid 616 (629)
+.. ++.++.|.---.|.+.+. +.+.++++.++.+.++..--.-.+.+||+.++....+.+.|+
T Consensus 306 fv~~e~~rlptvttv~vp~gvDw---------------~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~ 370 (385)
T KOG2862|consen 306 FVVDEELRLPTVTTVKVPYGVDW---------------KDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYID 370 (385)
T ss_pred eecChhhccCcceeeecCCCCCH---------------HHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHH
Confidence 752 345555554445555331 357788888877666532211123489999987888999999
Q ss_pred HHHHHHHHHh
Q psy1785 617 YFIDEIERLG 626 (629)
Q Consensus 617 ~l~~~i~~l~ 626 (629)
..++.|+...
T Consensus 371 ~v~~ll~~al 380 (385)
T KOG2862|consen 371 NVVELLKLAL 380 (385)
T ss_pred HHHHHHHHHH
Confidence 9998887654
No 73
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.72 E-value=5.6e-15 Score=156.42 Aligned_cols=315 Identities=10% Similarity=0.064 Sum_probs=206.0
Q ss_pred hcCCCccccccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEc
Q psy1785 241 ALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTS 318 (629)
Q Consensus 241 ~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s 318 (629)
..+.+...+...+....++..+.+++....|.+ ....++++|+|.++..++..... +...|+++
T Consensus 24 ~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--------------~g~~vl~~ 89 (350)
T cd00609 24 ALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLN--------------PGDEVLVP 89 (350)
T ss_pred hhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCC--------------CCCEEEEc
Confidence 344445556667777888888888888877653 35688899999987766655421 23468888
Q ss_pred CCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCH--HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHH---HH
Q psy1785 319 EDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLP--ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIA---DI 393 (629)
Q Consensus 319 ~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~--~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~---~i 393 (629)
...|.++..+++.+|. +++.|+.++++.++. +.++..+. ..+.+|+++..++.+|.+.|++++. ++
T Consensus 90 ~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~------~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~ 160 (350)
T cd00609 90 DPTYPGYEAAARLAGA---EVVPVPLDEEGGFLLDLELLEAAKT------PKTKLLYLNNPNNPTGAVLSEEELEELAEL 160 (350)
T ss_pred CCCchhHHHHHHHCCC---EEEEEecccccCCccCHHHHHhhcC------ccceEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 9999999999999998 999999998888776 44444332 2456777888999999999877665 79
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCC-CCCccEEEEEeccchhhhhhcCCCCc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLT-APQQCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~-~P~~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
|+++|++++| +++++.+......+. .. .-..+.|.++.+.||+++ .+.++|++++++..+...... ...+
T Consensus 161 ~~~~~~~~ivD~a~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~~~~~-~~~~ 233 (350)
T cd00609 161 AKKHGILIISDEAYAELVYDGEPPPAL-----AL-LDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK-LLPY 233 (350)
T ss_pred HHhCCeEEEEecchhhceeCCcccccc-----cC-cCccCcEEEEeecccccCCcccceEEEecCHHHHHHHHHH-HHHh
Confidence 9999999999 777655432211000 00 112248999999999998 556789988877444433211 0000
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF 550 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F 550 (629)
. ..+........++.+++... +++++..++..++++++.+.|++.+...+.. ++....+.+
T Consensus 234 ~-----------------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~g~~~~~ 294 (350)
T cd00609 234 T-----------------TSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVK-PSGGFFLWL 294 (350)
T ss_pred c-----------------ccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccC-CCccEEEEE
Confidence 0 00111223444555555433 7888889999999999999999985554322 233333444
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
++.+.. ....+.+.+.+.|.......... ....++|++++.+ ++||++++++|+
T Consensus 295 ~~~~~~----------------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~ 349 (350)
T cd00609 295 DLPEGD----------------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLA 349 (350)
T ss_pred ecCCCC----------------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhh
Confidence 432210 01234566666686443222111 1235899999734 999999999886
No 74
>PRK07179 hypothetical protein; Provisional
Probab=99.69 E-value=2.8e-14 Score=155.55 Aligned_cols=289 Identities=15% Similarity=0.194 Sum_probs=186.3
Q ss_pred HHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEE
Q psy1785 263 LAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLI 342 (629)
Q Consensus 263 ~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V 342 (629)
.+.+++++|.+ ..+++++|++||..++.+... +...|+++...|.|+...++..|. +++.+
T Consensus 105 e~~la~~~g~~--~~~~~~sG~~An~~~l~~l~~--------------~g~~v~~~~~~h~s~~~~~~~~g~---~~~~~ 165 (407)
T PRK07179 105 EKKLAAFTGFE--SCLLCQSGWAANVGLLQTIAD--------------PNTPVYIDFFAHMSLWEGVRAAGA---QAHPF 165 (407)
T ss_pred HHHHHHHhCCC--cEEEECCHHHHHHHHHHHhCC--------------CCCEEEEECCcCHHHHHHHHHCCC---eEEEe
Confidence 35688888875 468999999999887765322 234577789999999988888886 55544
Q ss_pred ecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccccccc
Q psy1785 343 KTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVF 420 (629)
Q Consensus 343 ~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~ 420 (629)
+ ..|+++|+++|++. .+.+|+.....+.+|.+.|+++|+++|+++|+++++ +++.+.. .. ..-+ +
T Consensus 166 ~-----~~d~~~l~~~l~~~-----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~-g~-~g~g-~ 232 (407)
T PRK07179 166 R-----HNDVDHLRRQIERH-----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTH-GP-QGAG-L 232 (407)
T ss_pred c-----CCCHHHHHHHHHhc-----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCc-CC-CCCc-h
Confidence 3 36999999988641 245677777888999999999999999999999999 5543221 11 0000 0
Q ss_pred ccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC-cchHH
Q psy1785 421 LTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK-PDVLK 499 (629)
Q Consensus 421 l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~ 499 (629)
...+++..++|.++.++||+++.+ .|+++.++ ++.........++++ .++-. ..+..
T Consensus 233 --~~~~~~~~~vdi~~~S~sK~~g~~--~G~l~~~~-~~~~~~~~~~~~~~~-----------------~~t~~~~~~aa 290 (407)
T PRK07179 233 --VAELGLTSRVHFITASLAKAFAGR--AGIITCPR-ELAEYVPFVSYPAIF-----------------SSTLLPHEIAG 290 (407)
T ss_pred --HHhcCCCCCCCEEEeechHhhhcc--CeEEEeCH-HHHHHHHHhCcCeee-----------------CCCCCHHHHHH
Confidence 011123223899999999999854 78887765 333322111111111 11111 12233
Q ss_pred HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHH
Q psy1785 500 FWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKE 579 (629)
Q Consensus 500 ~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~ 579 (629)
+..+++.+.. ..++.++..+++++|++.|+++ |+++.. ..+++.+.+... . -...+.+
T Consensus 291 ~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~-g~~v~~---~~~i~~l~~~~~----------~------~~~~~~~ 348 (407)
T PRK07179 291 LEATLEVIES--ADDRRARLHANARFLREGLSEL-GYNIRS---ESQIIALETGSE----------R------NTEVLRD 348 (407)
T ss_pred HHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCCC---CCCEEEEEeCCH----------H------HHHHHHH
Confidence 3444554422 2456788889999999999987 887653 235555553210 0 0135677
Q ss_pred HHHhcCcEEEee-eec-CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 580 RMMKSGSMMITY-QPI-HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 580 ~l~~~G~~~i~~-~~~-~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.|.++|...... .+. ....+++|++++ ..+|++||+++++.|+++..+
T Consensus 349 ~L~~~GI~~~~~~~p~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 349 ALEERNVFGAVFCAPATPKNRNLIRLSLN-ADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred HHHHCCceEeeecCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHh
Confidence 888888642111 111 112358999996 899999999999999887653
No 75
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.69 E-value=3e-14 Score=154.41 Aligned_cols=298 Identities=17% Similarity=0.183 Sum_probs=189.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+ +.++++||++++..++.+ .- .|...|+++...|.++..+++..+. +.
T Consensus 86 ~~le~~ia~~~g~~--~~ii~~~~~~a~~~~~~~-l~-------------~~gd~vi~~~~~~~s~~~~~~~~~~---~~ 146 (393)
T TIGR01822 86 KELEAKIAAFLGTE--DTILYASCFDANGGLFET-LL-------------GAEDAIISDALNHASIIDGVRLCKA---KR 146 (393)
T ss_pred HHHHHHHHHHhCCC--cEEEECchHHHHHHHHHH-hC-------------CCCCEEEEeccccHHHHHHHHhcCC---ce
Confidence 44456788999874 578889999988755433 21 1445678889999999998888775 44
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
+.++ .+|+++|+++|.+..+.+..+.+|+.....+.+|.+.|+++|+++|++||+++++ +++.+..... ..
T Consensus 147 ~~~~-----~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~--~~ 219 (393)
T TIGR01822 147 YRYA-----NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPT--GR 219 (393)
T ss_pred EEeC-----CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCC--CC
Confidence 4432 4899999999987544333566677666678999999999999999999999999 6643322111 00
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-c
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-D 496 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~ 496 (629)
+. ... .++..++|.++.++||+++++ ..|+++.+ +............|.+ .++... .
T Consensus 220 ~~-~~~--~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~~~l~~~~~~~~~-----------------~~~~~~~~ 277 (393)
T TIGR01822 220 GS-HEL--CGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVVELLRQRSRPYLF-----------------SNSLPPAV 277 (393)
T ss_pred ch-HHh--cCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHHHHHHHhCcccee-----------------cCCCCHHH
Confidence 00 000 122323899999999999865 35776654 3444432111111211 122221 1
Q ss_pred hHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHH
Q psy1785 497 VLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPK 576 (629)
Q Consensus 497 al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~ 576 (629)
...+..+++.+ ++.++..++..++++++.+.|++. |+++.. +..+.+.+...+. . ...+
T Consensus 278 ~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~i~~~~~---------~-------~~~~ 336 (393)
T TIGR01822 278 VGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIKP--ADHPIIPVMLYDA---------V-------LAQR 336 (393)
T ss_pred HHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCCEEEEEeCCH---------H-------HHHH
Confidence 22334444433 235667788888999999999886 887643 3444555543210 0 1135
Q ss_pred HHHHHHhcCcEEEeeeec---CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 577 IKERMMKSGSMMITYQPI---HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 577 i~~~l~~~G~~~i~~~~~---~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+.+.|.++|... ..... ......+|++++ ..+|++||+.+++.|+++.++
T Consensus 337 l~~~L~~~gI~v-~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~ 389 (393)
T TIGR01822 337 FARRLLEEGIYV-TGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGRE 389 (393)
T ss_pred HHHHHHHCCeeE-eeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 777888888543 32211 111236999995 899999999999999988664
No 76
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.68 E-value=1.9e-14 Score=153.35 Aligned_cols=300 Identities=14% Similarity=0.182 Sum_probs=187.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+ ..+++++||.++..++.+.+. .|...|+++..+|.+...++...|+ ++
T Consensus 21 ~~~~~~la~~~~~~--~~~~~~sgt~al~~~l~~l~~-------------~~gd~vl~~~~~~~~~~~~~~~~g~---~~ 82 (352)
T cd00616 21 REFEKAFAEYLGVK--YAVAVSSGTAALHLALRALGI-------------GPGDEVIVPSFTFVATANAILLLGA---TP 82 (352)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHcCC-------------CCCCEEEeCCcchHHHHHHHHHcCC---eE
Confidence 34455688888863 688999999998777765421 1445688899999999999999998 99
Q ss_pred EEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 340 YLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 340 ~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
+.+++++ ++.+|+++|++.+.+ .+.+|+.+ +.+|.+.|+++|.++|+++|+++++ ++..+.....
T Consensus 83 ~~~~~~~~~~~~d~~~l~~~i~~------~~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~--- 150 (352)
T cd00616 83 VFVDIDPDTYNIDPELIEAAITP------RTKAIIPV---HLYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKG--- 150 (352)
T ss_pred EEEecCCCcCCcCHHHHHHhcCc------CCeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECC---
Confidence 9999987 789999999988743 23445544 3579999999999999999999999 4442222211
Q ss_pred ccccccccccccCCcceEEEeC--CCCCCCCCCccEEEEEeccchhhhhhcC-CCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWN--PHKLLTAPQQCSVFLTRHQSVLTECHSA-SASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~--~HK~l~~P~~~g~ll~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
+.++ .. .|..+++ .||+++.+. .|+++++++++....... ...+.... ..+... ....+-
T Consensus 151 -------~~~~-~~-~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~--~~~~~~ 213 (352)
T cd00616 151 -------RKVG-TF-GDAGAFSFHPTKNLTTGE-GGAVVTNDEELAERARLLRNHGRDRDR-----FKYEHE--ILGYNY 213 (352)
T ss_pred -------EEcc-cC-cceeEEcCCCCCCCcccC-ceEEEECCHHHHHHHHHHHHcCCCCCC-----Cccccc--eeeecc
Confidence 0111 11 3444444 669996543 466777665554432110 00000000 000000 111111
Q ss_pred CcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC----CceEEEEEeeCCCCCCCCchhhHHHH
Q psy1785 494 KPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP----ECTNISFWYIPPSLRGKEDQADFNEL 569 (629)
Q Consensus 494 ~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p----~~~~v~F~~~p~~~~~~~~~~~~~~~ 569 (629)
+...+..++.+. ..+++++..++..++++++++.|++++|++++.+.+ ....++|++.+.. +. +
T Consensus 214 ~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~------- 281 (352)
T cd00616 214 RLSEIQAAIGLA--QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA--GE-S------- 281 (352)
T ss_pred CcCHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC--CC-C-------
Confidence 223333333332 346778888999999999999999999999875222 2356777764210 00 0
Q ss_pred HhhHHHHHHHHHHhcCcEEEe-eeecC--------------Cc-------cceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 570 LHKVAPKIKERMMKSGSMMIT-YQPIH--------------AL-------PNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 570 l~~~~~~i~~~l~~~G~~~i~-~~~~~--------------~~-------~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..++.+.|.++|...-. +.+.. +. ...+|+++ ++.+|++||++++++|+
T Consensus 282 ----~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~-~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 282 ----RDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPL-HPSLTEEEIDRVIEALR 352 (352)
T ss_pred ----HHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHhC
Confidence 13567777777753211 11110 00 14799999 59999999999999874
No 77
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.68 E-value=7e-14 Score=148.71 Aligned_cols=297 Identities=13% Similarity=0.134 Sum_probs=189.0
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
..++.+.+++++|.+ ..+++.+||+++..++.+... |...|+++...|+++..++...|. +
T Consensus 48 ~~~l~~~la~~~~~~--~~iv~~sg~~a~~~~~~~~~~--------------~gd~Vl~~~~~~~~~~~~~~~~g~---~ 108 (349)
T cd06454 48 HEELEEELAEFHGKE--AALVFSSGYAANDGVLSTLAG--------------KGDLIISDSLNHASIIDGIRLSGA---K 108 (349)
T ss_pred HHHHHHHHHHHhCCC--CEEEeccHHHHHHHHHHHhcC--------------CCCEEEEehhhhHHHHHHHHHcCC---c
Confidence 355566788888875 467777888888766543321 334577788899999999898888 7
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
++.++ .+|++.+++.|.+.. +...+.+|+.....+.+|.+.|+++|.++|+++|+++++ +++.+.+... .
T Consensus 109 ~~~~~-----~~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~~~--~ 180 (349)
T cd06454 109 KRIFK-----HNDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYGPH--G 180 (349)
T ss_pred eEEec-----CCCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccCCC--C
Confidence 87776 368889998887643 123566777778888999999999999999999999999 6543222110 0
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC-c
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK-P 495 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~ 495 (629)
... .... ....++|+++.++||+++.+ + |+++. ++..+.........|.. ..+.. .
T Consensus 181 ~~~-~~~~--~~~~~~~i~~~s~sK~~~~~-g-G~i~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~ 237 (349)
T cd06454 181 RGV-EEFG--GLTDDVDIIMGTLGKAFGAV-G-GYIAG-SKELIDYLRSYARGFIF-----------------STSLPPA 237 (349)
T ss_pred CCh-hhhc--cccccCcEEEeechhhhccc-C-CEEEC-CHHHHHHHHHhchhhhc-----------------cCCCCHH
Confidence 000 0000 01224899999999999864 2 55544 44444332211111110 01111 2
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
..+.+..+++..-. +++..++..++++++.+.|.+. |++++. ++....+++.. ++.. -..
T Consensus 238 ~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~-~~~~~~~~~~~-~~~~---------------~~~ 297 (349)
T cd06454 238 VAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGG-SPSHIIPPLIG-DDPA---------------KAV 297 (349)
T ss_pred HHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccC-CCCCcEEEEeC-CChH---------------HHH
Confidence 23444555555432 4667788889999999999887 887765 44433334432 1110 013
Q ss_pred HHHHHHHhcCcEEEeee-e-cCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 576 KIKERMMKSGSMMITYQ-P-IHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~-~-~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
++.+.|.++|....... . .....+++|++++ ..++++||+++++.|++++
T Consensus 298 ~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~ 349 (349)
T cd06454 298 AFSDALLERGIYVQAIRYPTVPRGTARLRISLS-AAHTKEDIDRLLEALKEVG 349 (349)
T ss_pred HHHHHHHhCCceEEEecCCccCCCCCeEEEEEe-CCCCHHHHHHHHHHHHHhC
Confidence 67788888886543211 1 0111258999995 8899999999999998764
No 78
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.67 E-value=5.3e-15 Score=158.24 Aligned_cols=305 Identities=15% Similarity=0.103 Sum_probs=199.5
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
..++.+..+-.++.+.+++++|.+. ...++++|++.+.+.|.....-. .| .+.+++.++...|.+ .+.
T Consensus 41 hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~-------~g---~~~l~i~~G~fg~r~-~~~ 109 (360)
T PRK05355 41 HRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLG-------GG---KKADYVDTGSWSKKA-IKE 109 (360)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCC-------CC---CeEEEEECCHHHHHH-HHH
Confidence 3567777888999999999999854 56778877666655554433221 12 234555555555555 567
Q ss_pred HHHcCCCCCCEEEEecCC-CCCCCHHHHHH-HHHHHHhCCCCcEEEEEeeCCCcccccc-CHHHHHHHHHHcCCeEEE-e
Q psy1785 329 AAFEGLGSDNVYLIKTDA-RGRMLPESLRG-EIQRTLAEGAVPFMVSATSGTTVLGAFD-PIPAIADICAEYDMADSV-T 404 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d~-~g~~d~~~Le~-~i~~~~~~g~~~~~Vvat~Gtt~~G~id-pl~ei~~i~~~~~~~lhV-A 404 (629)
++..|. . ..++.++ .|..+..++++ .|.+ .+-+|..++..|.+|.+. ||.+| +|+.+.| +
T Consensus 110 a~~~g~---~-~~~~~~~~~g~~~~~~~~~~~l~~------~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDa 173 (360)
T PRK05355 110 AKKYGE---V-NVAASSEDDGFTYIPPLDEWQLSD------DAAYVHYTSNETIDGTEFHELPDT------GDVPLVADM 173 (360)
T ss_pred HHHhCC---c-eEEecccccCCCCCCChhhccCCC------CCCEEEEccCCCcceEecCccccc------CCCcEEEEc
Confidence 777775 4 6666554 67766666655 4432 256899999999999997 77776 8998888 3
Q ss_pred ---cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcc
Q psy1785 405 ---WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK 481 (629)
Q Consensus 405 ---~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 481 (629)
.|+..+ + ++. .|.+++++||+++ |.|.|+++++++ .+.+.......|+.-...
T Consensus 174 vss~g~~~i--d--------------v~~-~d~~~~ssqK~lg-P~Glg~l~~s~~-~l~~~~~~~~~~~~~~~~----- 229 (360)
T PRK05355 174 SSDILSRPI--D--------------VSK-FGLIYAGAQKNIG-PAGLTIVIVRED-LLGRALPSIPSMLDYKTH----- 229 (360)
T ss_pred CccccCccC--C--------------HHH-ccEEEEecccccc-CCceEEEEECHH-HHhhcccCCChHHHHHHH-----
Confidence 332221 1 233 6799999999997 999999999985 343321111122211100
Q ss_pred cCCCCccCCCCCC-cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCc-eEEEEEeeCCCC
Q psy1785 482 YDSGDKHIQCGRK-PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPEC-TNISFWYIPPSL 557 (629)
Q Consensus 482 ~~~~~~~~~~sr~-~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~-~~v~F~~~p~~~ 557 (629)
.... .+ ..+-. ...+.+..+++.+-.+ |++++.++..++++++++.|++++.+..+.+ +... .+++|.+...
T Consensus 230 ~~~~-~~-~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-- 305 (360)
T PRK05355 230 ADND-SM-YNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE-- 305 (360)
T ss_pred HhcC-Cc-cCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh--
Confidence 0000 01 12212 2567778888888888 8999999999999999999999863333331 1234 5688875321
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+ ..++++.+.++|..+ +.... ..+.+|+|+. .++|++|||.|++.|+++.+
T Consensus 306 -----------~~---~~~~~~~~~~~Gi~~--~~~~~-~~g~vRiS~~-~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 306 -----------EL---DKKFLAEAKAAGLVG--LKGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred -----------HH---HHHHHHHHHHCCCcc--cCCCC-ccCcEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 01 124567788899764 22222 2257999996 99999999999999998754
No 79
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.67 E-value=6.7e-15 Score=156.73 Aligned_cols=305 Identities=13% Similarity=0.086 Sum_probs=196.1
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCC-chhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPG-GSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~G-gT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
.++.+..+-.++++.++++++.+. ...++++| ||.++..++..-..+ | .+.+++.+....|.. .+.
T Consensus 31 r~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~--------~---~~~l~i~~G~fg~r~-~~~ 98 (349)
T TIGR01364 31 RSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAE--------G---KVADYIVTGAWSKKA-AKE 98 (349)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCC--------C---CeEEEEECCHHHHHH-HHH
Confidence 467777888999999999999854 56888877 888866555532211 2 123444444444444 667
Q ss_pred HHHcCCCCCCEEEEecCCCC----CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-
Q psy1785 329 AAFEGLGSDNVYLIKTDARG----RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV- 403 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d~~g----~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV- 403 (629)
++..|+ +..+..++.+ ..|+++++. . ..+-+|..++..|.+|...| ++++.+++.+.|
T Consensus 99 a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVD 161 (349)
T TIGR01364 99 AKKYGV----VNVVASGKEGNYTKIPDPSTWEI--S------EDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVAD 161 (349)
T ss_pred HHHhCC----cEEEeccccCCCCCCCCHHhcCC--C------CCCCEEEEcCCCCcccEecc-----eecccCCCeEEEE
Confidence 777775 4445544322 455554441 1 13568999999999999876 566678888888
Q ss_pred ecCccc-cccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 TWNPHK-LLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 A~gg~~-l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
+..... ... + ++. .|.+++++||+++ |.|.|+++++++ .+.+.....+.|..- . .
T Consensus 162 avss~g~~~i---------d-----~~~-~d~~~~ssqK~lg-P~Glg~l~~s~~-~~~~~~~~~~~~~~~-~------~ 217 (349)
T TIGR01364 162 MSSNILSRPI---------D-----VSK-FGLIYAGAQKNIG-PAGLTVVIVRKD-LLGRASRITPSMLNY-K------I 217 (349)
T ss_pred ccccccCccC---------C-----HHH-ccEEEEecccccC-CCceEEEEECHH-HHhhcccCCCCcchH-H------H
Confidence 322211 111 1 233 6799999999997 999999999885 343321211222100 0 0
Q ss_pred CCCCccCCCCCC-cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC--Cc-eEEEEEeeCCCC
Q psy1785 483 DSGDKHIQCGRK-PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP--EC-TNISFWYIPPSL 557 (629)
Q Consensus 483 ~~~~~~~~~sr~-~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p--~~-~~v~F~~~p~~~ 557 (629)
........++-. ...+.+..+++.+-.+ |++++.++..++++++++.|++++|+.....+| .. .+++|.+...
T Consensus 218 ~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~-- 295 (349)
T TIGR01364 218 HAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE-- 295 (349)
T ss_pred HHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh--
Confidence 000000011212 2567778888888888 799999999999999999999998876553122 23 5577875321
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+ ..++++.+.++|. ++. .... ..+.+|+++. +++|++|||.|+++|+++.++
T Consensus 296 -----------~~---~~~~~~~~~~~Gi-~~~-~~~~-~~g~vRvS~~-~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 296 -----------EL---EKRFLKEAEERGL-VSL-KGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred -----------hH---hHHHHHHHHHCCC-ccc-CCcc-ccCeeEEECc-CCCCHHHHHHHHHHHHHHHHh
Confidence 01 1356678888997 332 2211 2248999996 999999999999999987653
No 80
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.66 E-value=2e-14 Score=153.89 Aligned_cols=308 Identities=11% Similarity=0.088 Sum_probs=194.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCC-chhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcch-HH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPG-GSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHY-SI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~G-gT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~-Si 325 (629)
...++.+..+-+++.+.+++++|.++ ...+|+.| ||.++..++...... ..+++ + ...|. .+
T Consensus 33 ~hr~~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-------------~~l~i-~-~G~~~~~~ 97 (361)
T TIGR01366 33 SHRQAPVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-------------KSLHL-S-FGEFSSKF 97 (361)
T ss_pred CcCChHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-------------cccEE-e-cCHHHHHH
Confidence 35678888999999999999999965 46788654 888877666433110 12233 2 23332 24
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-e
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-T 404 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A 404 (629)
.+.+....... ++..+++++...++.+ + ...+.+|..++.+|.+|.+.|+++| ++++|+.+.| |
T Consensus 98 ~~~a~~~~~~~-~~~~~~~~~~~~~~~~-----~------~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDa 162 (361)
T TIGR01366 98 AKAVKLAPWLG-EPIIVTADPGSAPEPQ-----A------DPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDA 162 (361)
T ss_pred HHHHHhhhccC-CceEEecCCCCCCCCc-----c------CCCCCEEEEcccCCccceecccccc---cccCCCeEEEEc
Confidence 45555543322 6788887765555531 1 1246689999999999999999988 5889999998 3
Q ss_pred cCccc-cccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC------CCccccCCcC
Q psy1785 405 WNPHK-LLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS------ASYLFQKDKF 477 (629)
Q Consensus 405 ~gg~~-l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~------~~yl~~~~~~ 477 (629)
..... ...+ ++. +|.+++++||+++.|.|.++++++++ .+.+..... +.|+.-..
T Consensus 163 vqs~g~~~id--------------v~~-~D~~~~s~~K~lg~~~Gl~~~~~s~~-~~~~~~~~~~~~~~~p~~~d~~~-- 224 (361)
T TIGR01366 163 TSGAGGLPVD--------------IAE-TDVYYFAPQKNFASDGGLWLAIMSPA-ALERIEAIAASGRWVPEFLSLPT-- 224 (361)
T ss_pred CccccCCCCC--------------HHH-CCEEEEEchhhcCCCCceEEEEECHH-HHhhhhcccCCCCCCchhhhHHH--
Confidence 22211 1111 344 89999999999999988777777775 333321110 11221100
Q ss_pred CCcccCCCCccCCCCCC----c-chHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC--CceE-E
Q psy1785 478 YDTKYDSGDKHIQCGRK----P-DVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP--ECTN-I 548 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~----~-~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p--~~~~-v 548 (629)
......+.+.. . ..+.+-.+++.+-.+ |++++.++..++++++++.|.+.++++++...+ .... .
T Consensus 225 ------~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~ 298 (361)
T TIGR01366 225 ------AVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVG 298 (361)
T ss_pred ------HHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceE
Confidence 00000111111 1 234666778877777 699999999999999999999997677664111 1211 2
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEee-eecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITY-QPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~-~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+|.+ +.+.. ...+.+.|.++|...... ..+. .+.+|++++ .++|++||++++++|+++.+
T Consensus 299 ~v~~-~~g~~---------------~~~v~~~L~~~gI~i~~~~~~l~--~~~vRis~~-~~~t~~di~~l~~al~~~~~ 359 (361)
T TIGR01366 299 TIDF-VDDID---------------AATVAKILRANGIVDTEPYRKLG--RNQLRVAMF-PAIDPDDVEALTECVDWVVE 359 (361)
T ss_pred EEEC-CCccC---------------HHHHHHHHHHCCCeeccCccccC--CCcEEEEcC-CCCCHHHHHHHHHHHHHHHh
Confidence 3443 33221 124667777787643211 1222 357999997 89999999999999999877
Q ss_pred cC
Q psy1785 628 DL 629 (629)
Q Consensus 628 ~l 629 (629)
+|
T Consensus 360 ~~ 361 (361)
T TIGR01366 360 RL 361 (361)
T ss_pred hC
Confidence 64
No 81
>PLN02880 tyrosine decarboxylase
Probab=99.66 E-value=2e-16 Score=175.08 Aligned_cols=251 Identities=15% Similarity=0.105 Sum_probs=185.1
Q ss_pred CCCCCChhHHHHHHHH-HhhcccccCCcccccccccccccCCCCHHHHHHhhcc------CCCCCCCCHHHHHHHHHHHh
Q psy1785 137 NAGPSSHGKLIDLMKT-VIQYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLEL------GFNAGPSSHAKLIDLMKTVI 209 (629)
Q Consensus 137 p~~~~~~~~ll~~~~~-~l~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~------~lp~~~~~~~~il~~l~~~~ 209 (629)
|++|.+.+++++++.+ +++++++++||+||+++++++..+++..+.+...+|. ..|.....|.++++|+.+++
T Consensus 56 p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~ 135 (490)
T PLN02880 56 PNQPETLDQVLDDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLL 135 (490)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHh
Confidence 5678899999999985 6799999999999999999999999999999988873 34555568899999999999
Q ss_pred cccccC-CCCccccccCCCCChHHHHHHHHHHhc--CCCccccccChhHHH---HHHHHHHHHHHHhCCCCCCeEEeCCc
Q psy1785 210 QYSVKT-GHPYFVNQLFSSVDPYGLVGQWLADAL--NPSVYTYEVSPVFSL---MEEHVLAQMRTIVGFQGGDGIFCPGG 283 (629)
Q Consensus 210 ~~~~~~-~~p~~~g~~~s~~~~~~~~~~~lt~~~--n~~~~~~~~~p~~~~---~E~~~~~~l~~l~G~~~~~g~~~~Gg 283 (629)
+++..+ .+....|++.++.+..++.+-+.+... ..... ....+.+.+ --+..+.+.++++|+.......++..
T Consensus 136 g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~-~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d 214 (490)
T PLN02880 136 NLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGK-NALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTD 214 (490)
T ss_pred CCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcc-cccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecC
Confidence 776332 111234788888898888886665421 10000 001111111 12566889999999976556666643
Q ss_pred hhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHH
Q psy1785 284 SMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTL 363 (629)
Q Consensus 284 T~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~ 363 (629)
...+..+...++++++.+++++|. .|.+||.+.+++ ..|.+|+ | +.|.+.+
T Consensus 215 ~~~~~~md~~~L~~~i~~~~~~g~--~p~~vvataGTT------------------------~~GaiDp--l-~eI~~i~ 265 (490)
T PLN02880 215 SSTNYALAPELLSEAISTDLSSGL--IPFFLCATVGTT------------------------SSTAVDP--L-LELGKIA 265 (490)
T ss_pred CCcCCcCCHHHHHHHHHHHHHCCC--ccEEEEEecCCC------------------------cCcccCc--H-HHHHHHH
Confidence 334556677777777877888885 688999999997 4455552 2 5556666
Q ss_pred hCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCccccccccccccccc
Q psy1785 364 AEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 364 ~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l 421 (629)
++.+.|+||++++|.....+ ++.+...++....+++++++|||+..|++|++++
T Consensus 266 ~~~~iwlHVDaA~gg~~~~~----~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~ll 319 (490)
T PLN02880 266 KSNGMWFHVDAAYAGSACIC----PEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLW 319 (490)
T ss_pred HHcCCEEEEehhhHHHHHhC----HHHHHHhcCchhcCEEEECchhhcCCCccEEEEE
Confidence 66779999999999887655 7777777777778999999999999999999876
No 82
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=6.4e-14 Score=154.54 Aligned_cols=316 Identities=14% Similarity=0.078 Sum_probs=195.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCeEE---eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcC------Ccch
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQGGDGIF---CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSE------DAHY 323 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~~~~g~~---~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~------~~H~ 323 (629)
.....+|..+++...++++.....-.+ ..+|+.+|+.++.+... |...|++.. .+|.
T Consensus 76 ~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~--------------pgD~Il~~d~~~gGhl~H~ 141 (475)
T PLN03226 76 EYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQ--------------PHDRIMGLDLPHGGHLSHG 141 (475)
T ss_pred hhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCC--------------CCCEEEECCCCcCcchhhh
Confidence 456788888898999999877532212 36788888877665432 344555522 4455
Q ss_pred HHHHHHHHcCCCCCCEE--EEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCe
Q psy1785 324 SIKKLAAFEGLGSDNVY--LIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMA 400 (629)
Q Consensus 324 Si~kaa~~lGlg~~~v~--~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~ 400 (629)
++..++++-+.+. .+. ..+.+ ++|.+|+++|++.+.+. .|.+|++ +.++++..-|+++|+++|+++|++
T Consensus 142 ~~~~g~~~s~~~~-~~~~~~y~~~~~~g~iD~d~Le~~l~~~-----~pklIv~--~~S~~s~~~D~a~i~~ia~~~ga~ 213 (475)
T PLN03226 142 YQTDGKKISATSI-YFESMPYRLDESTGLIDYDKLEKKAMLF-----RPKLIIA--GASAYPRDWDYARMRKIADKVGAL 213 (475)
T ss_pred hhhcccccccceE-EEEeeeeeecCCCCCcCHHHHHHHHhhc-----CCeEEEE--ecCcCCCccCHHHHHHHHHHcCCE
Confidence 5554443333310 112 22334 56899999999998642 3444443 456788888999999999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC---CCc--ccc
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS---ASY--LFQ 473 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~---~~y--l~~ 473 (629)
++| |++.+.+... .... .++. +|+++.++||||++|.| |++++++. ......... ..| ..+
T Consensus 214 LlvD~AH~~Gli~~~--------~~~~-p~~~-~Div~~t~hK~L~GP~G-g~I~~~~~-~~~~~~~g~~~~~d~~~~i~ 281 (475)
T PLN03226 214 LMCDMAHISGLVAAQ--------EAAS-PFEY-CDVVTTTTHKSLRGPRG-GMIFFRKG-PKPPKGQGEGAVYDYEDKIN 281 (475)
T ss_pred EEEEchhhhCcccCC--------CCCC-CCCC-CeEEEecCcccccCCCc-eEEEEchh-hcccccCCCccHHHHHHHhc
Confidence 999 6666554322 0000 1345 99999999999988998 78887653 221100000 011 000
Q ss_pred CCcCCCcccCCCCccCCCCCC-cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEe
Q psy1785 474 KDKFYDTKYDSGDKHIQCGRK-PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWY 552 (629)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~sr~-~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~ 552 (629)
.. ....++++-. ..+..+..+++.+-..+++++.++..+++++|++.|.+ .||+++.+..+..++.+.+
T Consensus 282 ~a---------~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l~~~~t~~hi~lv~~ 351 (475)
T PLN03226 282 FA---------VFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYKLVTGGTDNHLVLWDL 351 (475)
T ss_pred cc---------cCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCEEEcCCCCCCEEEEEc
Confidence 00 0011233322 24667777888887788999999999999999999998 4999986223345555555
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeee-ecC---CccceEEEee---cCCCCCHHHHHHHHHHHHHH
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQ-PIH---ALPNFFRLVL---QNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~-~~~---~~~~~lR~~~---~n~~~t~edid~l~~~i~~l 625 (629)
.|.++.+ .++.+.|.+.|.+.-... |.. -.+..+|+.. ++...+++||+++.+.|.++
T Consensus 352 ~~~gi~~---------------~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~ 416 (475)
T PLN03226 352 RPLGLTG---------------SRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRA 416 (475)
T ss_pred cCCCCCH---------------HHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHH
Confidence 4543321 134556666665421111 111 1233588722 45888999999999999876
Q ss_pred hh
Q psy1785 626 GH 627 (629)
Q Consensus 626 ~~ 627 (629)
.+
T Consensus 417 ~~ 418 (475)
T PLN03226 417 VT 418 (475)
T ss_pred HH
Confidence 54
No 83
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.65 E-value=3.5e-14 Score=154.33 Aligned_cols=322 Identities=13% Similarity=0.069 Sum_probs=195.1
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhc-----------------hhHHhcCCCCC-C
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAF-----------------PQIKTQGLASC-P 311 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~-----------------~~~~~~G~~~~-p 311 (629)
.....+..+|..+++.+.++||.+-.+. -..+|+.||+.+..+...... .+..+.+.... .
T Consensus 88 ~g~~~~d~ie~l~~~ra~~lf~a~~anv-qp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~g 166 (493)
T PRK13580 88 AGCQNVDTVEWEAAEHAKELFGAEHAYV-QPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGN 166 (493)
T ss_pred CCCchHHHHHHHHHHHHHHHhCCCcccc-cCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCC
Confidence 3456678899999999999999876433 334678888877776654210 01111110000 0
Q ss_pred CeEEEE--cCCcchHHHHHHHHcCCCCCCEEEEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHH
Q psy1785 312 RLVLYT--SEDAHYSIKKLAAFEGLGSDNVYLIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIP 388 (629)
Q Consensus 312 ~~vv~~--s~~~H~Si~kaa~~lGlg~~~v~~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ 388 (629)
.-++.. ..-.|.+......+.|.. -+++..++| ++|.+|+++|++.+.+. +|+ |+.+..++. +.+-|++
T Consensus 167 d~i~~l~l~~GGHlthg~~~n~~~~~-~~~~~y~vd~~~g~iD~d~l~~~~~~~-----~pl-vii~g~S~~-~~~~dl~ 238 (493)
T PRK13580 167 QRLLGMSLDSGGHLTHGFRPNISGKM-FHQRSYGVDPDTGLLDYDEIAALAREF-----KPL-ILVAGYSAY-PRRVNFA 238 (493)
T ss_pred CEEEeecCCCCCeeecCcccchhhhe-eeeEecccCcccCccCHHHHHHHHhhc-----CCE-EEEeCcccc-CCCcCHH
Confidence 112222 222343332233344421 155556666 46899999999988762 454 445555555 6677999
Q ss_pred HHHHHHHHcCCeEEE--ecCcccccccccccccccccc-cc-ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhh
Q psy1785 389 AIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRR-NY-VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECH 464 (629)
Q Consensus 389 ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~-~~-~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~ 464 (629)
+|+++|+++|+++.| |++.+.+... ... +. .+.. +|++++++||+|++|.| |++++++. +.....
T Consensus 239 ~i~eia~~~gA~L~VD~AH~~Gligg~--------~~~~~~~~~~~-~D~vtgT~hKaL~GP~G-G~I~~~~~-l~~~L~ 307 (493)
T PRK13580 239 KLREIADEVGAVLMVDMAHFAGLVAGK--------VFTGDEDPVPH-ADIVTTTTHKTLRGPRG-GLVLAKKE-YADAVD 307 (493)
T ss_pred HHHHHHHHcCCEEEEECchhhceeccc--------cchhhcCCCCC-CcEEEeCChhhccCCCe-EEEEecHH-HHHHHh
Confidence 999999999999999 6665554322 111 01 1344 99999999999988885 77777653 333322
Q ss_pred cCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC
Q psy1785 465 SASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE 544 (629)
Q Consensus 465 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~ 544 (629)
.. .+|+++.. -.....++-.+++..-...++++.++..+++++|++.|++. ||.++....+
T Consensus 308 ~a-~P~i~gg~-----------------l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTd 368 (493)
T PRK13580 308 KG-CPLVLGGP-----------------LPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTD 368 (493)
T ss_pred hC-CCcccCCC-----------------ccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCC
Confidence 22 24543321 01122222334444444566788999999999999999987 9998741235
Q ss_pred ceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeee--ec--CC--ccceEEEeecCC----CCCHHH
Q psy1785 545 CTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQ--PI--HA--LPNFFRLVLQNS----ALDHSD 614 (629)
Q Consensus 545 ~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~--~~--~~--~~~~lR~~~~n~----~~t~ed 614 (629)
..+|.+.+.+.. .....+.+.|.+.|... ... |. .+ ....||++++ . ..+++|
T Consensus 369 shIV~V~lg~~~---------------~~g~~a~~~L~e~GI~v-n~i~~Ptvp~g~~~~srLRIg~~-A~ttrg~teed 431 (493)
T PRK13580 369 NHLVLIDVTSFG---------------LTGRQAESALLDAGIVT-NRNSIPSDPNGAWYTSGIRLGTP-ALTTLGMGSDE 431 (493)
T ss_pred CCEEEEEeCCHH---------------HHHHHHHHHHHHCCeEE-ccccCCCCCCCCCCCceEEeccc-hhhhcCCCHHH
Confidence 667766653211 00124567888899643 311 11 12 1346999985 6 446999
Q ss_pred HHHHHHHHHHHhh
Q psy1785 615 MDYFIDEIERLGH 627 (629)
Q Consensus 615 id~l~~~i~~l~~ 627 (629)
|+.+++.|.++.+
T Consensus 432 i~~iad~l~~~l~ 444 (493)
T PRK13580 432 MDEVAELIVKVLS 444 (493)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987654
No 84
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.63 E-value=1.1e-13 Score=150.52 Aligned_cols=305 Identities=17% Similarity=0.146 Sum_probs=181.1
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH---
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL--- 328 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka--- 328 (629)
.+....+|+.+.+++++++|.+... ++..+||+++..++.+... |...|++...+|.+....
T Consensus 60 ~~~~~~l~~~~~~~~~~~~g~~~~~-v~~~sgt~a~~~~l~~l~~--------------~Gd~Vl~~~~~~~~~~~~~~~ 124 (402)
T cd00378 60 CEYVDEIEDLAIERAKKLFGAEYAN-VQPHSGSQANLAVYFALLE--------------PGDTIMGLDLSHGGHLTHGSF 124 (402)
T ss_pred chHHHHHHHHHHHHHHHHhCCCcee-eecCCcHHHHHHHHHHhcC--------------CCCEEEEecCccCcccccccc
Confidence 4455667777788899999987543 4444678887766554321 333566666666543221
Q ss_pred --HHHcCCCCCCEEEEecCC---CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE
Q psy1785 329 --AAFEGLGSDNVYLIKTDA---RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 329 --a~~lGlg~~~v~~V~~d~---~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV 403 (629)
++..|. +++.++.+. ++.+|+++|++.+.+. .+.+|+.+. +..|...|+++|+++|+++|+++++
T Consensus 125 ~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i~~~-----~~~~v~~~~--~~~~~~~~~~~I~~l~~~~~~~li~ 194 (402)
T cd00378 125 TKVSASGK---LFESVPYGVDPETGLIDYDALEKMALEF-----KPKLIVAGA--SAYPRPIDFKRFREIADEVGAYLLV 194 (402)
T ss_pred ccccccce---eEEEecCCcCcccCCcCHHHHHHHHHhC-----CCCEEEecC--cccCCCcCHHHHHHHHHhcCCEEEE
Confidence 444565 666776643 5899999999988641 233444333 3457788999999999999999999
Q ss_pred --ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcc
Q psy1785 404 --TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK 481 (629)
Q Consensus 404 --A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 481 (629)
++..+..... .... .+. ++|+++.++||++.+|.+ |++++.++.+..........+..
T Consensus 195 D~a~~~g~~~~g--------~~~~-~~~-~~dv~~~s~sK~l~G~~g-g~i~~~~~~~~~~l~~~~~~~~~--------- 254 (402)
T cd00378 195 DMAHVAGLVAGG--------VFPN-PLP-GADVVTTTTHKTLRGPRG-GLILTRKGELAKKINSAVFPGLQ--------- 254 (402)
T ss_pred Eccchhhhhhcc--------cCCC-ccc-CCcEEEeccccCCCCCCc-eEEEeccHHHHHHHHHHhCcccc---------
Confidence 5433222111 0000 123 389999999999977764 55555553444332111111110
Q ss_pred cCCCCccCCCCCC-cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCC
Q psy1785 482 YDSGDKHIQCGRK-PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGK 560 (629)
Q Consensus 482 ~~~~~~~~~~sr~-~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~ 560 (629)
++.. .....+..++...-..+++++.++..++++++.+.|++. |++++..+...+.+.+++.+.+...
T Consensus 255 ---------~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~~~- 323 (402)
T cd00378 255 ---------GGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDNHLVLVDLRPKGITG- 323 (402)
T ss_pred ---------CCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCCeEEEEeCCccCCCH-
Confidence 1111 112222223333323366788888999999999999997 9988741223444445443221110
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEe-eeecC----CccceEEEeecCC----CCCHHHHHHHHHHHHHHhh
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMIT-YQPIH----ALPNFFRLVLQNS----ALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~----~~~~~lR~~~~n~----~~t~edid~l~~~i~~l~~ 627 (629)
..+.+.|.+.|..+.. +.+.. ...+.||++++ . ..+++||+.+++.|+++.+
T Consensus 324 --------------~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~-~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 324 --------------KAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTP-AMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred --------------HHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCH-HHHHhCCCHHHHHHHHHHHHHHHh
Confidence 2345567677854321 11111 12357999885 4 4579999999999998754
No 85
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.63 E-value=2.7e-13 Score=147.96 Aligned_cols=305 Identities=14% Similarity=0.134 Sum_probs=187.7
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCe-EEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH-HHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDG-IFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS-IKKLA 329 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g-~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S-i~kaa 329 (629)
.|....+|+.+.+.+++++|.+ .. +++++|+.||+.++.+.. .|...|++....|.+ +...+
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~--~alv~~~SG~~A~~~~l~al~--------------~~GD~Vl~~~~~~~~~~~~g~ 132 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCD--YANVQPHSGSQANGAVYLALL--------------KPGDTILGMSLSHGGHLTHGA 132 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCC--ceEEecCCcHHHHHHHHHHhc--------------CCCCEEEEcCccceeeeecCC
Confidence 4777888887888999999976 35 446788999887766531 255678888889977 33233
Q ss_pred HHcCCCCCCE--EEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 330 AFEGLGSDNV--YLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 330 ~~lGlg~~~v--~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
+....+. .+ +.++++. ++.+|+++|++.+... .+.+|+. +.+++|..-|+++|.++|+++|++++| |
T Consensus 133 ~~~~~~~-~~~~~~~~~~~~~~~~d~~~le~~l~~~-----~~klVi~--~~~~~g~~~dl~~l~~la~~~g~~livD~A 204 (416)
T PRK13034 133 KVSLSGK-WYNAVQYGVDRLTGLIDYDEVEELAKEH-----KPKLIIA--GFSAYPRELDFARFREIADEVGALLMVDMA 204 (416)
T ss_pred cceeccc-eeeeEEcccccccCCcCHHHHHHHHhhc-----CCeEEEE--CCCccccccCHHHHHHHHHHcCCEEEEeCc
Confidence 3211111 22 2344433 4679999999988541 2444543 335578778999999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
++.+.+... ... ..+.. +|.+++++||++++|.| |+++++++........ +++..
T Consensus 205 ha~G~~~~g--------~~~-~~~~~-~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~~~~----~~~~~---------- 259 (416)
T PRK13034 205 HIAGLVAAG--------EHP-NPFPH-AHVVTTTTHKTLRGPRG-GMILTNDEEIAKKINS----AVFPG---------- 259 (416)
T ss_pred ccccCcccC--------CCC-CCCCC-ceEEEEeCcccCCCCCC-eEEEECcHHHHHHHHh----hcCCc----------
Confidence 555443321 100 02344 99999999999988876 5555655433222111 12111
Q ss_pred CCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCch
Q psy1785 485 GDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQ 563 (629)
Q Consensus 485 ~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~ 563 (629)
++.+... ...++..++...-..+..++.++..+++++|++.|++. ||+++.+..+.+++.+.+......
T Consensus 260 ----~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~~~----- 329 (416)
T PRK13034 260 ----LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKGLS----- 329 (416)
T ss_pred ----ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCCCC-----
Confidence 1111111 22222223322222344566789999999999999998 999874124556655554322110
Q ss_pred hhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC------CccceEEEeecCC----CCCHHHHHHHHHHHHHHhh
Q psy1785 564 ADFNELLHKVAPKIKERMMKSGSMMITYQPIH------ALPNFFRLVLQNS----ALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~------~~~~~lR~~~~n~----~~t~edid~l~~~i~~l~~ 627 (629)
...+.++|.+.|... ...+.. ..+..||++++ . ..+++||+.+++.|+++..
T Consensus 330 ----------~~~~~~~L~~~GI~v-~~~~~p~~~~~p~~~~~lR~~~~-~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 330 ----------GKDAEQALERAGITV-NKNTVPGDTESPFVTSGIRIGTP-AGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred ----------HHHHHHHHHhCCcEE-eccCCCCCCcCCCCCCeeEeCcH-HHHhCCCCHHHHHHHHHHHHHHHh
Confidence 124557787888643 321111 11246999984 6 6779999999999998764
No 86
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.62 E-value=2e-13 Score=149.29 Aligned_cols=305 Identities=14% Similarity=0.103 Sum_probs=185.4
Q ss_pred hhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH---HH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK---LA 329 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k---aa 329 (629)
+....+|..+.+++++++|.+.... +..+||.++..++.+.. .|...|+++..+|.+... ..
T Consensus 67 ~~~~~~e~~~~~~la~~~g~~~~~i-~~~sgt~al~~~l~~l~--------------~~gd~Vl~~~~~~~~~~~~~~~~ 131 (416)
T PRK00011 67 EYVDVVEQLAIDRAKELFGAEYANV-QPHSGSQANAAVYFALL--------------KPGDTILGMDLAHGGHLTHGSPV 131 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCCceee-ecCCchHHHHHHHHHhc--------------CCCCEEEEeccccCCcccccccc
Confidence 4456677778889999999976443 33457887765554331 134457777777765322 11
Q ss_pred H--HcCCCCCCEEEEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 330 A--FEGLGSDNVYLIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 330 ~--~lGlg~~~v~~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
. ..|+ +++.++.+ +++.+|+++|+++|.+. .+.+|+.+ .+..|...|+++|.++|+++|+++++ +
T Consensus 132 ~~~~~g~---~~~~~~~~~~~~~~d~~~l~~~i~~~-----~~k~v~~~--~~~~~~~~~~~~I~~la~~~~~~livD~a 201 (416)
T PRK00011 132 NFSGKLY---NVVSYGVDEETGLIDYDEVEKLALEH-----KPKLIIAG--ASAYSRPIDFKRFREIADEVGAYLMVDMA 201 (416)
T ss_pred cccccee---eEeecCcCcccCCcCHHHHHHHHHhc-----CCCEEEEC--CCcCCCccCHHHHHHHHHHcCCEEEEECc
Confidence 1 2233 67788887 45899999999988641 23344432 35667778999999999999999999 5
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
+..+..... ... ..+. ++|.++.++||++++|.+ |++++.++............+..
T Consensus 202 ~~~g~~~~g--------~~~-~~~~-~~di~~~S~~K~l~g~~g-g~i~~~~~~~~~~l~~~~~~~~~------------ 258 (416)
T PRK00011 202 HIAGLVAAG--------VHP-SPVP-HADVVTTTTHKTLRGPRG-GLILTNDEELAKKINSAVFPGIQ------------ 258 (416)
T ss_pred chhcccccC--------ccC-CCCC-CCcEEEecCCcCCCCCCc-eEEEeCCHHHHHHHHHHhCcccc------------
Confidence 443222111 000 0133 389999999999977764 56666554444432211111110
Q ss_pred CCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCch
Q psy1785 485 GDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQ 563 (629)
Q Consensus 485 ~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~ 563 (629)
++... ....++.++.....+++.+++++..++++++++.|++. |+++....+..+.+.+.+.+.+..
T Consensus 259 ------~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~~~----- 326 (416)
T PRK00011 259 ------GGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKGLT----- 326 (416)
T ss_pred ------CCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccCCC-----
Confidence 11111 22333444444445678899999999999999999986 888763123345555554322110
Q ss_pred hhHHHHHhhHHHHHHHHHHhcCcEEEe-eeecC----CccceEEEeec---CCCCCHHHHHHHHHHHHHHhh
Q psy1785 564 ADFNELLHKVAPKIKERMMKSGSMMIT-YQPIH----ALPNFFRLVLQ---NSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~----~~~~~lR~~~~---n~~~t~edid~l~~~i~~l~~ 627 (629)
...+.+.|.++|...-. +.++. -.+..+|++.. ....|++|++++++.|+++..
T Consensus 327 ----------~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 327 ----------GKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred ----------HHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 12467778788865311 11221 01246998652 125689999999999998743
No 87
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.62 E-value=5.9e-13 Score=143.28 Aligned_cols=294 Identities=12% Similarity=0.096 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC
Q psy1785 255 FSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL 334 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl 334 (629)
...+-.+..+.+++++|.+. .++.+.|+.+|+ ++..+.. .+..+|+.+...|.|+..+++.+.
T Consensus 54 ~~~~~~~~e~~la~~~~~~~--~l~~~sG~~a~~-~~~~~~~-------------~~~d~ii~d~~~H~sv~~~~~~~~- 116 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAPE--AFIVPSGYMANL-GLCAHLS-------------SVTDYVLWDEQVHISVVYSLSVIS- 116 (370)
T ss_pred ChHHHHHHHHHHHHHhCCCe--EEEECChHHHHH-HHHHHhC-------------CCCCEEEEEhhhhHHHHHHHHHcC-
Confidence 34455677778999999853 456666667775 3222211 133467888999999999988764
Q ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccc
Q psy1785 335 GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLT 412 (629)
Q Consensus 335 g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~ 412 (629)
| ..+.+ +..|+++|++.|+...+.+....+|+.....+.+|.+.|+++|.++|+++|++++| +++.+.+..
T Consensus 117 ~--~~~~~-----~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~ 189 (370)
T PRK05937 117 G--WHQSF-----RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGD 189 (370)
T ss_pred C--ceEEe-----cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCC
Confidence 2 23333 35789999999986543323345677778899999999999999999999999999 665433221
Q ss_pred ccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 413 APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
.-. + + ...++... .+.+..+++|.++ |.|+++++.++ ..........+|.+.. ..
T Consensus 190 ~g~--g-~--~~~~~~~~-~~~~~~tlsK~~g-~~G~~vl~~~~--~~~~~~~~~~~~~~s~----------------~~ 244 (370)
T PRK05937 190 DGK--G-F--CHSLGYEN-FYAVLVTYSKALG-SMGAALLSSSE--VKQDLMLNSPPLRYST----------------GL 244 (370)
T ss_pred CCC--c-h--HHhhCCCC-CcEEEEechhhhh-cCceEEEcCHH--HHHHHHHhCCCCeecC----------------CC
Confidence 100 0 0 00012222 3455667779886 67777665533 2221111112222211 11
Q ss_pred CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 493 RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
....++.+..+++.+-.+| +...++..++.++|.+.|... +. . + .+.|.+... .
T Consensus 245 ~~~~~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~-~~---~--~---~~~i~~~~~--~-------------- 298 (370)
T PRK05937 245 PPHLLISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSA-AP---G--C---VQPIFLPGI--S-------------- 298 (370)
T ss_pred CHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCC-CC---C--C---EEEEEeCCh--h--------------
Confidence 1223444556666554555 445677888889998887643 10 0 1 122332110 0
Q ss_pred HHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
...+.+.|.++|. +++...... ..++|+++. .++|++|||++++.|+++.+
T Consensus 299 -~~~~~~~L~~~gi-~v~~~~~~~-~~~iRis~~-~~~t~edid~l~~~L~~~~~ 349 (370)
T PRK05937 299 -EQELYSKLVETGI-RVGVVCFPT-GPFLRVNLH-AFNTEDEVDILVSVLATYLE 349 (370)
T ss_pred -HHHHHHHHHHCCe-eEEeeCCCC-CCEEEEEcC-CCCCHHHHHHHHHHHHHHHH
Confidence 1356777888885 444222222 247999995 99999999999999987654
No 88
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.61 E-value=9.5e-13 Score=143.26 Aligned_cols=298 Identities=11% Similarity=0.119 Sum_probs=187.4
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+ ..++.++|+++|..++..+... .+..+|++....|.++..++...|. .+
T Consensus 93 ~~Le~~la~~~g~~--~~l~~~sG~~an~~ai~~l~~~------------~~~~~v~~~~~~h~s~~~~~~~~g~---~~ 155 (402)
T TIGR01821 93 VELEAELADLHGKE--SALVFTSGYVANDATLATLAKI------------IPGCVIFSDELNHASMIEGIRHSGA---EK 155 (402)
T ss_pred HHHHHHHHHHhCCC--eEEEECchHHHHHHHHHHhhCC------------CCCCEEEEcchHhHHHHHHHHHcCC---eE
Confidence 45556688888853 5788888899999888766532 1345677777789999988888876 56
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
..++. .|+++|++.++... ...+.+|+.....+.+|.+.|+++|.++|++++++++| +++.+.+ .+ ...
T Consensus 156 ~~~~~-----~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~-~g~ 226 (402)
T TIGR01821 156 FIFRH-----NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GP-RGG 226 (402)
T ss_pred EEECC-----CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CC-CCC
Confidence 55543 47888988886431 12456778888889999999999999999999999999 6653221 11 111
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcch
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDV 497 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 497 (629)
+.. .. .++....|.+.....|.++.+- |+++. +++...........|.+.. ...+..+
T Consensus 227 g~~-~~--~~~~~~~div~~t~sKa~g~~G--G~i~~-~~~~~~~l~~~~~~~~~t~----------------~~~~~~~ 284 (402)
T TIGR01821 227 GIA-ER--DGLMHRIDIIEGTLAKAFGVVG--GYIAA-SRKLIDAIRSYAPGFIFTT----------------SLPPAIA 284 (402)
T ss_pred ccc-hh--ccCCCCCeEEEEechhhhccCC--ceeec-CHHHHHHHHHhCcCceecC----------------cCCHHHH
Confidence 111 11 1222227899899999998643 44444 4344332211111222100 1111223
Q ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHH
Q psy1785 498 LKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKI 577 (629)
Q Consensus 498 l~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i 577 (629)
..+..+++.+... ..+.++..++++++.+.|++. |++++. +..+++.+.+ +. . . .+.++
T Consensus 285 aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~i~~i~~-~~-------~-~-------~a~~~ 343 (402)
T TIGR01821 285 AGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVIP--NPSHIVPVII-GD-------A-A-------LCKKV 343 (402)
T ss_pred HHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcCC--CCCCEEEEEe-CC-------H-H-------HHHHH
Confidence 3444555544333 444556668999999999987 887653 4555555543 11 0 0 12356
Q ss_pred HHHHHhc-CcEEEeeeec---CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 578 KERMMKS-GSMMITYQPI---HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 578 ~~~l~~~-G~~~i~~~~~---~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.++|.++ |.+ +..... ....+++|++++ ..+|++|||++++.|+++.++
T Consensus 344 ~~~L~~~~Gi~-v~~~~~p~~~~g~~~lRis~~-~~~t~edi~~~~~~l~~~~~~ 396 (402)
T TIGR01821 344 SDLLLNKHGIY-VQPINYPTVPRGTERLRITPT-PAHTDKMIDDLVEALLLVWDR 396 (402)
T ss_pred HHHHHhcCCEE-EEeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 7777654 754 432211 111258999995 899999999999999987654
No 89
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.60 E-value=4.5e-13 Score=143.69 Aligned_cols=302 Identities=12% Similarity=0.140 Sum_probs=179.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCC--CCCCeEEEEcCCcchH-----HHHHH
Q psy1785 257 LMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLA--SCPRLVLYTSEDAHYS-----IKKLA 329 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~--~~p~~vv~~s~~~H~S-----i~kaa 329 (629)
.+..++.+++++++|.+ .+++++|+|.++..++.+.... .....-..+. ..+...|+++. .|+. +..++
T Consensus 45 ~~~~~~~~~~a~~~g~~--~~~~~~g~t~al~~al~al~~~-Gd~~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~ 120 (363)
T TIGR01437 45 ELVNKTGEYIANLLGVE--DAVIVSSASAGIAQSVAAVITR-GNRYLVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMV 120 (363)
T ss_pred HHHHHHHHHHHHhhCCC--eEEEEcCHHHHHHHHHHHHhcC-CCcchhhcccccccccceEEEEC-ccchhcCCchHHHH
Confidence 44577788899999975 5799999999998888765432 0000000000 01122344443 5654 34566
Q ss_pred HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEE-EeeCCCccccccCHHHHHHHHHHcCCeEEE--ecC
Q psy1785 330 AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVS-ATSGTTVLGAFDPIPAIADICAEYDMADSV--TWN 406 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vv-at~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~g 406 (629)
...|. .++.++. ++.+|+++|+++|.+. +.+|+ ++...+.+|.+-|+++|+++|+++|+++++ +++
T Consensus 121 ~~~g~---~~v~v~~--~~~~d~~~le~ai~~~------t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~ 189 (363)
T TIGR01437 121 RLGGG---KVVEAGY--ANECSAEQLEAAITEK------TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAE 189 (363)
T ss_pred HhcCC---eEEEEcC--CCCCCHHHHHHhcChh------ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCC
Confidence 77787 7777775 4679999999999753 33344 445567889999999999999999999999 655
Q ss_pred ccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCC
Q psy1785 407 PHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 407 g~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 486 (629)
... . .. ...|+|.+++++||++++|. .|+++.++ ..+..... +.....
T Consensus 190 ~~~---~--------~~----~~~g~D~~~~S~~K~l~gp~-~G~l~~~~-~~i~~~~~----~~~~~~----------- 237 (363)
T TIGR01437 190 EDL---Q--------KY----YRLGADLVIYSGAKAIEGPT-SGLVLGKK-KYIEWVKL----QSKGIG----------- 237 (363)
T ss_pred Cch---H--------HH----HHcCCCEEEEeCCcccCCCc-eEEEEEcH-HHHHHHHh----ccCCCc-----------
Confidence 111 0 00 12258999999999999997 67766543 44443210 000000
Q ss_pred ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC------ceEEEEEeeCCCCCCC
Q psy1785 487 KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE------CTNISFWYIPPSLRGK 560 (629)
Q Consensus 487 ~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~------~~~v~F~~~p~~~~~~ 560 (629)
..++.+. ...+.+..++..+-..+.+.. ++..+.++++.++|.++||+++....+. ...|+|.....+..
T Consensus 238 ~~~~~~~-~~~~gl~aAl~~~~~~~~~~~-~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~-- 313 (363)
T TIGR01437 238 RAMKVGK-ENILGLTAALEQYLSTGKESG-AEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGMT-- 313 (363)
T ss_pred ceeccCH-HHHHHHHHHHHHHHccCcccH-HHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCCC--
Confidence 0011111 123444445544433333222 2333456689999999999998741111 12334432111111
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..++.++|.+.|.-.+. .++....+.+|+.+. .++++|+|.++++|+++
T Consensus 314 -------------~~~l~~~L~~~~~~I~~-r~~~~~~~~~~l~~~--~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 314 -------------AADVVQALRQGEPAIYT-RGYKANEGIIEIDPR--SVTGGQLDIIVERIREI 362 (363)
T ss_pred -------------HHHHHHHHhcCCCCEEE-eeeeecCCeEEEEee--cCCHHHHHHHHHHHHHh
Confidence 13677788776632222 111111246888884 46799999999999876
No 90
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.60 E-value=5e-13 Score=142.04 Aligned_cols=294 Identities=14% Similarity=0.178 Sum_probs=206.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
.+.-..+|++ +++++|.+ ..++.++|-.+|+..+.+-.. ++.+|+..+..|.|+.++++.
T Consensus 83 ~~~h~~LE~~----lA~f~g~e--~al~f~SGy~AN~~~i~~l~~--------------~~dli~~D~lnHASiidG~rl 142 (388)
T COG0156 83 SDLHVELEEE----LADFLGAE--AALLFSSGFVANLGLLSALLK--------------KGDLIFSDELNHASIIDGIRL 142 (388)
T ss_pred cHHHHHHHHH----HHHHhCCC--cEEEEcccchhHHHHHHHhcC--------------CCcEEEEechhhhhHHHHHHh
Confidence 3444455555 88888886 466667778888766654322 467899999999999999998
Q ss_pred cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 332 EGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 332 lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
.+- +++..+. .|+++||+.+++....+..+.+|+.-.--++.|.+-||++|.+++++|+.|+.| |++-+.
T Consensus 143 s~a---~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv 214 (388)
T COG0156 143 SRA---EVRRFKH-----NDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGV 214 (388)
T ss_pred CCC---cEEEecC-----CCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccc
Confidence 887 7887773 789999999998664443456677777889999999999999999999999999 777665
Q ss_pred ccccccccccccccccc----ccC-CcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 410 LLTAPQQCSVFLTRRNY----VIE-VVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~----~i~-~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
+ .+ ..+.+ |++ .-+|+++.+.-|.+|+ .|.++..+........+...+|++...-
T Consensus 215 ~-G~--------~GrG~~e~~g~~~~~vdi~~gTlsKAlGs---~Gg~v~g~~~~~d~L~~~ar~~ifStal-------- 274 (388)
T COG0156 215 L-GP--------NGRGLAEHFGLEPEEVDIIVGTLGKALGS---SGGYIAGSAALIDYLRNRARPFIFSTAL-------- 274 (388)
T ss_pred c-CC--------CCccHHHHhCCCCccceEEEEEchhhhcc---cCceeeCcHHHHHHHHHhCCceeccCCC--------
Confidence 4 22 11221 343 2269999999999994 6777777765555444555677765321
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchh
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQA 564 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~ 564 (629)
.+..+.++-.+++.+- -..++.++..+++.++++.++.. ++.+. +...+++.+.+.++
T Consensus 275 --------pP~~aaa~~~al~~l~--~~~~~r~~L~~~~~~~~~~~~~~-~~~~~--~s~s~I~pv~~gd~--------- 332 (388)
T COG0156 275 --------PPAVAAAALAALRILE--EGPERRERLQELAAFFRSLLKAL-GLVLL--PSESPIIPVILGDE--------- 332 (388)
T ss_pred --------CHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhc-CCccC--CCCCCeeeeEeCCH---------
Confidence 1234445555666543 33456788888999999776664 77653 35666776654321
Q ss_pred hHHHHHhhHHHHHHHHHHhcCcEEEe----eeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 565 DFNELLHKVAPKIKERMMKSGSMMIT----YQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 565 ~~~~~l~~~~~~i~~~l~~~G~~~i~----~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
+.+.++.+.|.++|.. +. ++...+. .-||++++ ...|++||+.+++.+.++
T Consensus 333 -------~~a~~~s~~l~~~Gi~-v~~i~~PTVp~gt-arlRi~lt-a~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 333 -------ERALEASRALLEEGIY-VSAIRPPTVPKGT-ARLRITLT-AAHTEEDIDRLAEALSEV 387 (388)
T ss_pred -------HHHHHHHHHHHHCCee-EeeecCCCCCCCc-ceEEEEec-CCCCHHHHHHHHHHHHhh
Confidence 1134567788888753 33 2222344 36999996 999999999999999875
No 91
>PLN02483 serine palmitoyltransferase
Probab=99.60 E-value=1.7e-12 Score=144.32 Aligned_cols=345 Identities=13% Similarity=0.147 Sum_probs=201.3
Q ss_pred cCCCCccccccCCCCChHHHHHHHHHHhcCCC-ccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHH
Q psy1785 214 KTGHPYFVNQLFSSVDPYGLVGQWLADALNPS-VYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAIS 292 (629)
Q Consensus 214 ~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~-~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~ 292 (629)
+.++-.|+|+-.........+.+.+..+.-.. ...... .......++.+.+++++|.+ +.++.+.|+.+|+.++.
T Consensus 104 n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~--g~~~~~~ele~~lA~~~g~~--~ai~~~~G~~an~~~i~ 179 (489)
T PLN02483 104 NLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDG--GTTKLHRELEELVARFVGKP--AAIVFGMGYATNSTIIP 179 (489)
T ss_pred EeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCcccccc--CCcHHHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH
Confidence 34555677755433333333344444432111 111111 12334455666788999854 35555667777775444
Q ss_pred HHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC----C-
Q psy1785 293 CARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEG----A- 367 (629)
Q Consensus 293 ~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g----~- 367 (629)
+. - .|...|++....|.|+..+++..|+ +++.++.+ |+++|++.+++....+ .
T Consensus 180 al-~-------------~~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-----d~~~le~~l~~~i~~~~p~t~~ 237 (489)
T PLN02483 180 AL-I-------------GKGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-----TPSHLEEVLREQIAEGQPRTHR 237 (489)
T ss_pred Hh-C-------------CCCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-----CHHHHHHHHHhhhhcccccccc
Confidence 32 1 2455788999999999999999998 99999854 6788888887543222 0
Q ss_pred --CcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccC-CcceEEEeCCCCC
Q psy1785 368 --VPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIE-VVADSVTWNPHKL 442 (629)
Q Consensus 368 --~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~-~gaDsv~~~~HK~ 442 (629)
..++|+...-.+..|.+.|+++|.++|++|++++.+ +++...+ .. ..-+. ..+ +++. .++|.++.+++|.
T Consensus 238 p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~-~G~g~-~~~--~~v~~~~~dI~~~SfSKs 312 (489)
T PLN02483 238 PWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GK-TGRGV-CEL--LGVDPADVDIMMGTFTKS 312 (489)
T ss_pred CCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CC-CCCch-HHh--cCCCcccCcEEEEecchh
Confidence 113444444457789999999999999999999999 7653221 11 00000 000 1121 2389999999999
Q ss_pred CCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhc-C---hhhHHHHHHH
Q psy1785 443 LTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAK-G---TDGLEAHIDK 518 (629)
Q Consensus 443 l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~-G---~~G~~~~~~~ 518 (629)
++.+ | |+++ .+++++.........+.+.. ......+..+-.+|+.+ + .+-..++.++
T Consensus 313 ~g~~-G-G~i~-~~~~li~~l~~~~~~~~~~~----------------~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~ 373 (489)
T PLN02483 313 FGSC-G-GYIA-GSKELIQYLKRTCPAHLYAT----------------SMSPPAVQQVISAIKVILGEDGTNRGAQKLAQ 373 (489)
T ss_pred cccC-c-eEEE-cCHHHHHHHHHhCccccccC----------------CcCHHHHHHHHHHHHHHHhCccccchHHHHHH
Confidence 9863 2 5544 44445543322111111100 00111111222334322 1 2223456788
Q ss_pred HHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeec---C
Q psy1785 519 SFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPI---H 595 (629)
Q Consensus 519 ~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~---~ 595 (629)
..+++++|++.|+++ |+++.. +....++.+.+..+ .. ..++.++|.++|..+.. ... .
T Consensus 374 l~~~~~~l~~~L~~~-G~~v~~-~~~sp~~~l~l~~~------------~~----~~~~~~~Ll~~GI~v~~-~~fp~~p 434 (489)
T PLN02483 374 IRENSNFFRSELQKM-GFEVLG-DNDSPVMPIMLYNP------------AK----IPAFSRECLKQNVAVVV-VGFPATP 434 (489)
T ss_pred HHHHHHHHHHHHHHC-CCcccC-CCCCCEEEEEECCH------------HH----HHHHHHHHHHCCcEEee-eCCCCCC
Confidence 889999999999998 887765 33344554443211 01 12567778888876542 211 1
Q ss_pred CccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 596 ALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 596 ~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.....+|++++ ..+|++|||.+++.|+++++.
T Consensus 435 ~~~~~vRi~is-a~~t~edId~~l~~L~~~~~~ 466 (489)
T PLN02483 435 LLLARARICIS-ASHSREDLIKALEVISEVGDL 466 (489)
T ss_pred CCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 11247999996 889999999999999988654
No 92
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.60 E-value=1.2e-16 Score=171.16 Aligned_cols=256 Identities=20% Similarity=0.203 Sum_probs=176.3
Q ss_pred hhHHHHhhcccCCCCCCChhHHHHHHHHHh-hcccccCCcccccccccccccCCCCHHHHHHhhccC------CCCCCCC
Q psy1785 125 PEELEKKLELGFNAGPSSHGKLIDLMKTVI-QYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLELG------FNAGPSS 197 (629)
Q Consensus 125 p~el~~~l~~~lp~~~~~~~~ll~~~~~~l-~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~~------lp~~~~~ 197 (629)
|+++++.++.++|++|.+.++|++++++.+ ++..++.||+||+++++++....+..+.+...+|.. .|.....
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 788999999999999999999999999776 555566679999999999999999999999888632 2222346
Q ss_pred HHHHHHHHHHHhcccccC-CCCccccccCCCCChHHHHHHHHHHhc--C----------CCccccccChhHHHHHHHHHH
Q psy1785 198 HAKLIDLMKTVIQYSVKT-GHPYFVNQLFSSVDPYGLVGQWLADAL--N----------PSVYTYEVSPVFSLMEEHVLA 264 (629)
Q Consensus 198 ~~~il~~l~~~~~~~~~~-~~p~~~g~~~s~~~~~~~~~~~lt~~~--n----------~~~~~~~~~p~~~~~E~~~~~ 264 (629)
|.++++|+.++++++... ..+...|.+.++.+...+.+-+.+... . .....+ .+. --+..+.
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~-~s~----~aH~S~~ 155 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIY-VSE----QAHYSIE 155 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEE-EET----TS-THHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccc-ccc----ccccHHH
Confidence 788899999999887443 223456888888888887775554311 0 001001 011 1145567
Q ss_pred HHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec
Q psy1785 265 QMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT 344 (629)
Q Consensus 265 ~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~ 344 (629)
+.++++|+. ....+ +..+..+...++++++.+..++|. .|..||.+.+++
T Consensus 156 Kaa~~lGlg---~~~I~--~~~~~~md~~~L~~~l~~~~~~g~--~p~~vvat~Gtt----------------------- 205 (373)
T PF00282_consen 156 KAARILGLG---VRKIP--TDEDGRMDIEALEKALEKDIANGK--TPFAVVATAGTT----------------------- 205 (373)
T ss_dssp HHHHHTTSE---EEEE---BBTTSSB-HHHHHHHHHHHHHTTE--EEEEEEEEBS-T-----------------------
T ss_pred HhcceeeeE---EEEec--CCcchhhhHHHhhhhhcccccccc--cceeeeccCCCc-----------------------
Confidence 899999997 33333 333445555666666777777884 466788888887
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCccccccccccccccccc
Q psy1785 345 DARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 345 d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~~ 423 (629)
..|.+| +| +.|.+.+++...|+||++++|+....+ +++++..++.+..++|++++|+|+..|++|++++..
T Consensus 206 -~~Ga~D--~l-~~i~~i~~~~~~wlHVDaA~gg~~~~~----~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r 276 (373)
T PF00282_consen 206 -NTGAID--PL-EEIADICEKYNIWLHVDAAYGGSALLS----PEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVR 276 (373)
T ss_dssp -TTSBB---SH-HHHHHHHHHCT-EEEEEETTGGGGGGH----CTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEES
T ss_pred -cccccc--CH-HHHhhhccccceeeeeccccccccccc----ccccccccccccccccccchhhhhcCCccceeEEee
Confidence 556666 33 345555666789999999999877655 666667788888999999999999999999998643
No 93
>KOG0628|consensus
Probab=99.59 E-value=2.5e-15 Score=156.39 Aligned_cols=279 Identities=17% Similarity=0.133 Sum_probs=195.4
Q ss_pred HHHHHHHHHHHHHHhhhhccccCCCcccccCChhHHHHhhcccCCCCCCChhHHHHHHHHHh-hcccccCCccccccccc
Q psy1785 93 HERFFRDAFEVLLRDGVFKATSRGNKVNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTVI-QYSVKTGHPYFVNQLFS 171 (629)
Q Consensus 93 ~~~~~~~~~d~l~~~~~~~~~~~~~~V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l-~y~v~t~hP~F~~~l~s 171 (629)
......-+.|-+- -+++.+.-| -+ .|.-++++++...|++|++.++|++++++++ +..+||+||+||+++++
T Consensus 10 gk~mVD~IadY~e--~ir~r~v~P--~v---~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyfpa 82 (511)
T KOG0628|consen 10 GKEMVDYIADYLE--NIRKRRVLP--DV---KPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYFPA 82 (511)
T ss_pred HHHHHHHHHHHHH--hhhccCCCC--CC---CcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEccC
Confidence 3444444444442 345555552 23 4678999999999999999999999999665 99999999999999999
Q ss_pred ccccCCCCHHHHHHhhc------cCCCCCCCCHHHHHHHHHHHhcccccCC--C-CccccccCCCCChHHHHHHHHHHh-
Q psy1785 172 SKVNEWVNPEELEKKLE------LGFNAGPSSHAKLIDLMKTVIQYSVKTG--H-PYFVNQLFSSVDPYGLVGQWLADA- 241 (629)
Q Consensus 172 ~~v~~~~~~~~l~~~~~------~~lp~~~~~~~~il~~l~~~~~~~~~~~--~-p~~~g~~~s~~~~~~~~~~~lt~~- 241 (629)
+...+++..+.|...++ ...|.-.+-|--+++|+.+++..+..+. | ..-.|.+.++++-..+++-+.++.
T Consensus 83 ~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~ 162 (511)
T KOG0628|consen 83 GNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTE 162 (511)
T ss_pred ccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHH
Confidence 99999999999988765 2566655666677899999998775442 1 233456666666555554333221
Q ss_pred ----cCCC------------ccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhc
Q psy1785 242 ----LNPS------------VYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQ 305 (629)
Q Consensus 242 ----~n~~------------~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~ 305 (629)
+.++ ...|-..+.-..+|+ .+-+.|.. -..++ |+.|+.+-..++++++.+++++
T Consensus 163 ~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssvek-----a~~i~~Vk---lR~l~--td~n~~mr~~~L~~AIe~D~ar 232 (511)
T KOG0628|consen 163 KIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEK-----ACLIAGVK---LRALP--TDENFGMRGDTLRKAIEEDIAR 232 (511)
T ss_pred HHHHhhcCCCcccchhhhhhheEEecCcccchHHH-----hHhhccee---EEEee--cccCcCCCHHHHHHHHHHHHhC
Confidence 1111 112222222222332 22222222 12222 3346666667778889999999
Q ss_pred CCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc
Q psy1785 306 GLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD 385 (629)
Q Consensus 306 G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id 385 (629)
|+ .|..++.+-+++ ..|++..+ ..|-..+++..+|+||+|++.++..+.
T Consensus 233 Gl--IPf~v~at~GTT-----~~ca~D~l----------------------~elg~Vc~~~glWLHVDAAYAGsa~iC-- 281 (511)
T KOG0628|consen 233 GL--IPFFVCATLGTT-----SSCAFDEL----------------------EELGPVCREEGLWLHVDAAYAGSAFIC-- 281 (511)
T ss_pred CC--ccEEEEEeecCc-----cccccccH----------------------HHhcchhhhcCEEEEeehhhccccccC--
Confidence 97 799999998888 33443333 445556667779999999999999999
Q ss_pred CHHHHHHHHHHcCCeEEEecCccccccccccccccc
Q psy1785 386 PIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 386 pl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l 421 (629)
+|++.+.++.+-.+++.+++|+|+...+||+++.
T Consensus 282 --pE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 282 --PEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred --HHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 9999999999999999999999999999999754
No 94
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.58 E-value=1.7e-12 Score=140.66 Aligned_cols=302 Identities=18% Similarity=0.212 Sum_probs=187.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG 335 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg 335 (629)
..+..++.+++++++|.+ +.+++.+|++++..++.+.. .|...|++...+|++...+++..|.
T Consensus 86 ~~l~~~l~~~la~~~g~~--~~i~~tsG~~a~~~~~~~l~--------------~~gd~vi~~~~~~~~~~~~~~~~~~- 148 (397)
T PRK06939 86 QDLHKELEEKLAKFLGTE--DAILYSSCFDANGGLFETLL--------------GKEDAIISDALNHASIIDGVRLCKA- 148 (397)
T ss_pred cHHHHHHHHHHHHHhCCC--cEEEEcChHHHHHHHHHHhC--------------CCCCEEEEEhhhhHHHHHHHHhcCC-
Confidence 344567778899999865 34555555877766543321 2455678888999999999998887
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
+++.++. +|+++|++.+.+....+..+.+|+...-.+.+|.++|+++|.++|+++++|+++ ++..+.+...
T Consensus 149 --~~~~~~~-----~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~ 221 (397)
T PRK06939 149 --KRYRYAN-----NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGEN 221 (397)
T ss_pred --ceEEeCC-----CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCC
Confidence 7777764 589999998876443333456666555567789999999999999999999999 6642221110
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
-.... .. .++..++|.++.++||+++.+ ..|+++.+. ............|.. .++.
T Consensus 222 -~~~~~--~~--~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~~-~~~~~l~~~~~~~~~-----------------~~~~ 277 (397)
T PRK06939 222 -GRGTV--EH--FGVMDRVDIITGTLGKALGGA-SGGYTAGRK-EVIDWLRQRSRPYLF-----------------SNSL 277 (397)
T ss_pred -CCCHH--HH--cCCCCCCcEEEEECHHHhCcc-CceEEEeCH-HHHHHHHHhCccccc-----------------cCCC
Confidence 00000 00 122223799999999999655 457766654 444432211111111 1111
Q ss_pred Cc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 494 KP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 494 ~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
.. .+..+..+++.+. + .+++.++..++.+++.+.|++. ++++.. +..+.+.+.. +.. .
T Consensus 278 ~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~~--~~~~~~~~~~-~~~---------~------ 336 (397)
T PRK06939 278 APAIVAASIKVLELLE-E-SDELRDRLWENARYFREGMTAA-GFTLGP--GEHPIIPVML-GDA---------K------ 336 (397)
T ss_pred CHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCCcCC--CCCCEEEEEE-CCH---------H------
Confidence 11 2233344454432 2 2466677888999999999886 776543 4444333322 211 0
Q ss_pred HHHHHHHHHHhcCcEEEeeeecC---CccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIH---ALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~---~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
...++.++|.++|..... ..+. ...+++|++++ ..++++||+.+++.|+++.++
T Consensus 337 ~~~~~~~~L~~~gI~v~~-~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~~ 393 (397)
T PRK06939 337 LAQEFADRLLEEGVYVIG-FSFPVVPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGKE 393 (397)
T ss_pred HHHHHHHHHHHCCceEee-eCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 013577888888865443 2111 11358999995 778999999999999988664
No 95
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.58 E-value=2.8e-12 Score=139.85 Aligned_cols=297 Identities=10% Similarity=0.103 Sum_probs=187.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++++|. ...++.++|+++|..++..++.. .|..+|+.....|.|+..++...+. .+
T Consensus 94 ~~l~~~la~~~g~--~~~~~~~sG~~an~~ai~~l~~~------------~~~~~i~~~~~~h~s~~~~~~~~~~---~~ 156 (407)
T PRK09064 94 VELERELADLHGK--EAALVFTSGYVSNDATLSTLAKL------------IPDCVIFSDELNHASMIEGIRRSRC---EK 156 (407)
T ss_pred HHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHHhCC------------CCCCEEEEeCcchHHHHHHHHHcCC---cE
Confidence 4455668888885 35677788889998887765432 1455677777889999888888776 66
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
..++. .|+++|++.++... ...+.+|+.....+..|.+.|+++|.++|++++++++| +++.+.+ .+ ...
T Consensus 157 ~~~~~-----~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~-g~-~g~ 227 (407)
T PRK09064 157 HIFRH-----NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY-GP-RGG 227 (407)
T ss_pred EEECC-----CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc-CC-CCC
Confidence 66653 37889988886421 12355677777888999999999999999999999999 7653221 11 111
Q ss_pred ccccccccccc-CCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcc
Q psy1785 418 SVFLTRRNYVI-EVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD 496 (629)
Q Consensus 418 ~~~l~~~~~~i-~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 496 (629)
+. ..+. ++ +. .|.++.+++|.++.+ | |+++. ++...........+|.+. ....+..
T Consensus 228 g~-~~~~--~~~~~-~div~~t~sKa~g~~-G-G~~~~-~~~~~~~l~~~~~~~~~t----------------~~~~~~~ 284 (407)
T PRK09064 228 GI-AERD--GLMDR-IDIIEGTLAKAFGVM-G-GYIAG-SAALVDAVRSYAPGFIFT----------------TSLPPAI 284 (407)
T ss_pred Ch-HHhc--CCCCC-CeEEEEecchhhhcc-C-ceEec-CHHHHHHHHHhCcccccc----------------CcCCHHH
Confidence 10 0111 22 34 799999999999864 2 55544 434443221111122210 0111223
Q ss_pred hHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHH
Q psy1785 497 VLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPK 576 (629)
Q Consensus 497 al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~ 576 (629)
+..+..+++.+... ....++..+++++|.+.|++. |++++. +..+++.+.+. .. ....+
T Consensus 285 ~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~iv~i~~~-~~---------------~~~~~ 343 (407)
T PRK09064 285 AAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVMP--NESHIVPVMVG-DP---------------EKCKK 343 (407)
T ss_pred HHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCCEEEEEeC-CH---------------HHHHH
Confidence 44455566655433 234577888999999999986 887654 44555555431 10 01235
Q ss_pred HHHHHHhc-CcEEEeeeec---CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 577 IKERMMKS-GSMMITYQPI---HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 577 i~~~l~~~-G~~~i~~~~~---~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+.++|.++ |.+ +..... ....+.+|++++ ..+|++||+++++.|+++.++
T Consensus 344 l~~~L~~~~gi~-v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~ 397 (407)
T PRK09064 344 ASDMLLEEHGIY-VQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWAR 397 (407)
T ss_pred HHHHHHHhCCEE-EeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHH
Confidence 67777654 754 332211 111257999995 999999999999999987654
No 96
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.57 E-value=2.6e-14 Score=148.88 Aligned_cols=223 Identities=17% Similarity=0.137 Sum_probs=151.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEE-eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIF-CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSD 337 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~-~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~ 337 (629)
-.++.+.+++++|.+ ..++ ++|+|.++..++.+.. .|...|+++..+|.|+..++...|.
T Consensus 61 i~~~~~~~A~~~ga~--~~~~~~~Gst~a~~~~l~al~--------------~~gd~Vlv~~~~h~s~~~~~~~~g~--- 121 (294)
T cd00615 61 IKEAQELAARAFGAK--HTFFLVNGTSSSNKAVILAVC--------------GPGDKILIDRNCHKSVINGLVLSGA--- 121 (294)
T ss_pred HHHHHHHHHHHhCCC--CEEEEcCcHHHHHHHHHHHcC--------------CCCCEEEEeCCchHHHHHHHHHCCC---
Confidence 366677799999975 3454 8888888877766442 2455788889999999999999988
Q ss_pred CEEEEecCCC------CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 338 NVYLIKTDAR------GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 338 ~v~~V~~d~~------g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
+++.++.+.+ +.+|+++|++++.+ +..+.+|+.+.. |.+|.+.|+++|+++|+++|++++| ||+.+.
T Consensus 122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~----~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~ 196 (294)
T cd00615 122 VPVYLKPERNPYYGIAGGIPPETFKKALIE----HPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHF 196 (294)
T ss_pred EEEEecCccCcccCcCCCCCHHHHHHHHHh----CCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhh
Confidence 8888877532 47999999998865 223556667754 7899999999999999999999999 888765
Q ss_pred cccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccC
Q psy1785 410 LLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHI 489 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 489 (629)
.+.+ .........|+|.++.++||++++|.++|++++++.......+.. ..+++
T Consensus 197 ~~~~--------~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~-~~~~~----------------- 250 (294)
T cd00615 197 RFHP--------ILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNE-ALNLH----------------- 250 (294)
T ss_pred ccCc--------ccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHH-HHHHH-----------------
Confidence 4433 111001233699999999999998888898888764211111110 00111
Q ss_pred CCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc
Q psy1785 490 QCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH 532 (629)
Q Consensus 490 ~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~ 532 (629)
+.+.+. ....+-.+++.+..+| ++++++..+++++++++|.+
T Consensus 251 ~ttsps~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 251 QSTSPSYLILASLDVARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 111121 1222233333333345 44678889999999998763
No 97
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.57 E-value=2.8e-12 Score=140.01 Aligned_cols=298 Identities=14% Similarity=0.157 Sum_probs=186.1
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+ ..++.++|+++|..++...... .|..+|+++...|.++..++...|. ++
T Consensus 94 ~~Le~~la~~~g~~--~~i~~~sG~~a~~~~i~~l~~~------------~~g~~vi~~~~~h~s~~~~~~~~g~---~~ 156 (410)
T PRK13392 94 VLLERELADLHGKE--SALLFTSGYVSNDAALSTLGKL------------LPGCVILSDALNHASMIEGIRRSGA---EK 156 (410)
T ss_pred HHHHHHHHHHhCCC--CEEEECcHHHHHHHHHHHHhcC------------CCCCEEEEehhhhHHHHHHHHHcCC---eE
Confidence 45556789999964 5677777888888777643211 1334677777899999888888887 77
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
+.++.+ |.++|++.++.... ..+.+|+.....+.+|.+-|+++|.++|++++++++| +++.+.+ .+ ...
T Consensus 157 ~~~~~~-----d~~~l~~~l~~~~~--~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~-~g~ 227 (410)
T PRK13392 157 QVFRHN-----DLADLEEQLASVDP--DRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-GA-RGG 227 (410)
T ss_pred EEEeCC-----CHHHHHHHHHhccC--CCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-CC-CCC
Confidence 776532 66778777765321 2456788888899999999999999999999999999 7663322 11 111
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcch
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDV 497 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 497 (629)
+. .....+ .+. +|.++.+++|+++.+. |++.. +++...........|.+.. .......
T Consensus 228 g~-~~~~~~-~~~-~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~----------------~~~~~~~ 285 (410)
T PRK13392 228 GI-AERDGL-MDR-IDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTT----------------ALPPAVA 285 (410)
T ss_pred ch-hhhccC-CCC-CcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccC----------------cCCHHHH
Confidence 10 011111 234 7888899999998753 44443 4444443222222222110 0011223
Q ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHH
Q psy1785 498 LKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKI 577 (629)
Q Consensus 498 l~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i 577 (629)
..+..+++.....+ ...++..++++++.+.|++. |+++. ++..+.+.+++. .. . ...++
T Consensus 286 ~a~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~i~~~-~~-----------~----~~~~~ 344 (410)
T PRK13392 286 AGATAAIRHLKTSQ--TERDAHQDRVAALKAKLNAN-GIPVM--PSPSHIVPVMVG-DP-----------T----LCKAI 344 (410)
T ss_pred HHHHHHHHHHhcCH--HHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCCEEEEEeC-CH-----------H----HHHHH
Confidence 34445555433322 34466788899999999987 88765 355555545431 10 0 12357
Q ss_pred HHHHH-hcCcEEEeeee---cCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 578 KERMM-KSGSMMITYQP---IHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 578 ~~~l~-~~G~~~i~~~~---~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.++|. ++|.+ +.... ......++|++++ ...|++|+|+++++|+++.++
T Consensus 345 ~~~L~~~~GI~-v~~~~~p~~~~~~~~lRis~~-~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 345 SDRLMSEHGIY-IQPINYPTVPRGTERLRITPT-PLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred HHHHHHhCCEE-EeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 77786 46754 33221 1111258999995 899999999999999987654
No 98
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.57 E-value=5.7e-13 Score=142.31 Aligned_cols=320 Identities=13% Similarity=0.056 Sum_probs=199.9
Q ss_pred ccccccChhHHHHHHHHHHHHHHHhCCCC-CC-eEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcch
Q psy1785 246 VYTYEVSPVFSLMEEHVLAQMRTIVGFQG-GD-GIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHY 323 (629)
Q Consensus 246 ~~~~~~~p~~~~~E~~~~~~l~~l~G~~~-~~-g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~ 323 (629)
+.....+|.+..+-.++.+.+.++++.+. .. ..++.+||.+...++.....+ +...++..+ .+
T Consensus 28 ~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~-------------~g~~vLv~g--~F 92 (374)
T TIGR01365 28 LGRSHRSKLGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGC-------------RGVDVLAWE--SF 92 (374)
T ss_pred cccCcCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCC-------------CCCeEEEEC--HH
Confidence 44456799999999999999999999864 33 455777777765555432211 222233334 44
Q ss_pred H--HH-HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCe
Q psy1785 324 S--IK-KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMA 400 (629)
Q Consensus 324 S--i~-kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~ 400 (629)
+ +. +.++..|++ ++..+..+....+|+++++. ++ .|..++..|.+|...|+.++...+ ++..
T Consensus 93 G~r~~~eia~~~g~~--~v~~l~~~~g~~~~~~~ve~------~~-----~v~~vhnETSTGv~npv~~i~~~~--~~~l 157 (374)
T TIGR01365 93 GKGWVTDVTKQLKLP--DVRVLEAEYGKLPDLKKVDF------KN-----DVVFTWNGTTSGVRVPNGDFIPAD--REGL 157 (374)
T ss_pred HHHHHHHHHHhcCCC--CcEEEcCCCCCCCCHHHcCC------CC-----CEEEecCCCchheecccccccccc--CCCc
Confidence 4 44 788889982 37777777777899998872 11 267899999999999997666433 4777
Q ss_pred EEE-e---cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCC-----Ccc
Q psy1785 401 DSV-T---WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASA-----SYL 471 (629)
Q Consensus 401 lhV-A---~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~-----~yl 471 (629)
+.| + +|+..+- ++. +|.+..+.||.|+.|.|.|++.++++.+ .+...... .|+
T Consensus 158 liVDavSs~g~~~l~----------------~d~-iDv~~tgsQK~L~~ppGls~v~vs~~Al-~~~~~~~~y~~~~~~~ 219 (374)
T TIGR01365 158 TICDATSAAFAQDLD----------------YHK-LDVVTFSWQKVLGGEGAHGMLILSPRAV-ARLESYTPAWPLPKIF 219 (374)
T ss_pred EEEEccchhcCCCCC----------------hhH-CcEEEEechhccCCCCceEEEEECHHHH-HHHhhcCCCCCChhhh
Confidence 777 3 4433221 344 9999999999999999999999998654 33221111 121
Q ss_pred ccCCcCCCccc--CCCCccCCCCCC-cchHHHHHH---HHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC--
Q psy1785 472 FQKDKFYDTKY--DSGDKHIQCGRK-PDVLKFWFM---WKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE-- 542 (629)
Q Consensus 472 ~~~~~~~~~~~--~~~~~~~~~sr~-~~al~~w~~---l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~-- 542 (629)
.-... ..+ +... -+ +.. .....++.. ++.+-.+ |++++.+++.++++.+++.+++...++++..+
T Consensus 220 ~~~~~---~~~~~~~~~--~~-t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~ 293 (374)
T TIGR01365 220 RLTKG---GKLNKKIFE--GS-TINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPE 293 (374)
T ss_pred ccccc---cchhhhhhc--CC-CCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChh
Confidence 10000 000 0000 01 111 123333433 4433454 89999999999999999999998337776521
Q ss_pred -CCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEE-eeeecCCccceEEEeecCCCCCHHHHHHHHH
Q psy1785 543 -PECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMI-TYQPIHALPNFFRLVLQNSALDHSDMDYFID 620 (629)
Q Consensus 543 -p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i-~~~~~~~~~~~lR~~~~n~~~t~edid~l~~ 620 (629)
....++++++.+++......++.++ ...++++.|.++|..+- ++.... ++.||+..+ ...+.+||+.+++
T Consensus 294 ~rS~tvt~v~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~gi~i~~G~~~~~--~~~fRIg~~-G~i~~~di~~l~~ 365 (374)
T TIGR01365 294 IRSNTSVCLKVVDPAIDALDEDAQAD-----FAKELISTLEKEGVAYDIGSYRDA--PSGLRIWCG-ATVEKSDLECLCP 365 (374)
T ss_pred hcCCCeEEEEeCCccccccccchhhH-----HHHHHHHHHHHCCEEEeccccccC--CCceEEecC-CcCCHHHHHHHHH
Confidence 2334566776433221000000110 11357888888886432 222222 357999998 9999999999999
Q ss_pred HHHHHhh
Q psy1785 621 EIERLGH 627 (629)
Q Consensus 621 ~i~~l~~ 627 (629)
.|.=+.+
T Consensus 366 ~l~~~~~ 372 (374)
T TIGR01365 366 WLDWAFA 372 (374)
T ss_pred HHHHHHh
Confidence 9976543
No 99
>PLN02822 serine palmitoyltransferase
Probab=99.56 E-value=5e-12 Score=140.27 Aligned_cols=310 Identities=14% Similarity=0.151 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG 335 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg 335 (629)
.....++.+.+++++|.++ ...+++|++ ++..++.+.. .+..+|+.....|+++..++.+.+-
T Consensus 153 ~~~~~~Lee~La~~~~~~~-~i~~s~G~~-a~~sai~a~~--------------~~gd~Ii~d~~~H~s~~~~~~ls~~- 215 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTPD-SILYSYGLS-TIFSVIPAFC--------------KKGDIIVADEGVHWGIQNGLYLSRS- 215 (481)
T ss_pred HHHHHHHHHHHHHHhCCCC-EEEECCHHH-HHHHHHHHhC--------------CCCCEEEEeCCccHHHHHHHHHcCC-
Confidence 3445666677888888653 455565554 5555444221 1345677889999999999988886
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhC----CCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAE----GAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~----g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
+++.++.+ |.++|+..+++..++ .....+|+...-.+.+|.+-|+++|+++|++|++++++ +++-..
T Consensus 216 --~~~~~~~n-----d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gv 288 (481)
T PLN02822 216 --TIVYFKHN-----DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGV 288 (481)
T ss_pred --eEEEECCC-----CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccc
Confidence 88888865 567888877765432 11224566655667799999999999999999999999 666322
Q ss_pred ccccccccccccccccccc--CCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 410 LLTAPQQCSVFLTRRNYVI--EVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~~i--~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
+ ... .-+. ..++++ .. .|.++.+..|.++.+- |+++ .++...+........|.+.
T Consensus 289 l-G~~-G~G~---~e~~~v~~~~-~dii~~s~sKalg~~G--G~i~-g~~~ii~~~~~~~~~~~fs-------------- 345 (481)
T PLN02822 289 L-GKS-GRGL---SEHFGVPIEK-IDIITAAMGHALATEG--GFCT-GSARVVDHQRLSSSGYVFS-------------- 345 (481)
T ss_pred c-CCC-CCCh---HHHcCCCCCC-CeEEEecchhhhhhCC--eEEE-cCHHHHHHHHhcCCceeec--------------
Confidence 2 210 0000 011133 34 8999999999997432 5554 4444444322111222221
Q ss_pred cCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhH
Q psy1785 488 HIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADF 566 (629)
Q Consensus 488 ~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~ 566 (629)
.+-+. .+.+.-.+++.+. ...+..++..++.++|++.|++.+|+++.. ++...++.+.+... .+.... +
T Consensus 346 ---a~lPp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~-~~~spi~~l~l~~~--~~~~~~-~- 415 (481)
T PLN02822 346 ---ASLPPYLASAAITAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIGS-NTLSPIVFLHLEKS--TGSAKE-D- 415 (481)
T ss_pred ---cccCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCCCCEEEEEeCCC--cccccc-h-
Confidence 11111 1222223444332 125677888999999999999988988765 45566666665321 000000 0
Q ss_pred HHHHhhHHHHHHHHHH-hcCcEEEeeeecC--C---ccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 567 NELLHKVAPKIKERMM-KSGSMMITYQPIH--A---LPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 567 ~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~--~---~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
. +...++.++|. ++|.++. ..+.. + .+..+|++++ ..+|++||+++++.|+++..+
T Consensus 416 -~---~~~~~~~~~Ll~e~GV~v~-~~~~~~~~~~~~~~~lRi~is-~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 416 -L---SLLEHIADRMLKEDSVLVV-VSKRSTLDKCRLPVGIRLFVS-AGHTESDILKASESLKRVAAS 477 (481)
T ss_pred -H---HHHHHHHHHHHhcCCEEEE-eeCCCCcCCCCCCCcEEEEEC-CCCCHHHHHHHHHHHHHHHHH
Confidence 0 11246778887 7786543 22111 1 1236999995 889999999999999987654
No 100
>PRK15029 arginine decarboxylase; Provisional
Probab=99.55 E-value=2e-12 Score=147.69 Aligned_cols=172 Identities=18% Similarity=0.174 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
-.++.+.+++++|.+. .-..+.|.|.+|..++.++.. |...|++...+|-|+..++.+.|+ .
T Consensus 207 I~eAq~~aA~~fgA~~-t~FlvNGST~gn~a~i~a~~~--------------~gd~Vlv~RN~HKSv~~al~L~ga---~ 268 (755)
T PRK15029 207 FGESEKYAARVFGADR-SWSVVVGTSGSNRTIMQACMT--------------DNDVVVVDRNCHKSIEQGLILTGA---K 268 (755)
T ss_pred HHHHHHHHHHHhCCCc-EEEEeCChhHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHcCC---e
Confidence 3666778999999863 345566767777765555432 455788999999999999999999 8
Q ss_pred EEEEecCC--C---CCCC-----HHHHHHHHHHHH----hCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-
Q psy1785 339 VYLIKTDA--R---GRML-----PESLRGEIQRTL----AEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV- 403 (629)
Q Consensus 339 v~~V~~d~--~---g~~d-----~~~Le~~i~~~~----~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV- 403 (629)
.++++..- . +.++ ++.++++|++.. +++.+|..|+.|. +|..|.+-++++|+++|+++++.++|
T Consensus 269 Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~-PTY~Gv~~di~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 269 PVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTN-CTYDGVCYNAKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred EEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEEC-CCCcceeeCHHHHHHHHHhcCCeEEEE
Confidence 88886542 2 3555 999999996531 2345666776665 67789999999999999999999999
Q ss_pred -ecCccccccccccccccccccc-ccc-----C-Ccce-EEEeCCCCCCCCCCccEEEEEecc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRN-YVI-----E-VVAD-SVTWNPHKLLTAPQQCSVFLTRHQ 457 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~-~~i-----~-~gaD-sv~~~~HK~l~~P~~~g~ll~r~~ 457 (629)
|||+|..+.+ .++. ..+ . .||| .++-+.||.|.+-.+++++.+++.
T Consensus 348 EAhGah~~F~~--------~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 348 EAWYGYARFNP--------IYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred CccccccccCc--------cccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 9999998776 2222 123 2 4799 899999999999999999999764
No 101
>PLN02271 serine hydroxymethyltransferase
Probab=99.55 E-value=3e-12 Score=139.89 Aligned_cols=321 Identities=14% Similarity=0.064 Sum_probs=198.7
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCC-CC-e-EEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCC---cch
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQG-GD-G-IFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSED---AHY 323 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~-~~-g-~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~---~H~ 323 (629)
.......++|..+++.+.++||.+. .+ . +---+||.||+.++.+-. .|...|++... .|.
T Consensus 187 ~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl--------------~PGD~IL~ldl~~GGHl 252 (586)
T PLN02271 187 TGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLL--------------LPGDRIMGLDSPSGGHM 252 (586)
T ss_pred CCChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhc--------------CCCCEEEEecCCCCCch
Confidence 3456677899999999999999875 12 2 333388999887775442 24445555333 354
Q ss_pred HHH------HHHHHcCCCCCCEEEEe--cC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHH
Q psy1785 324 SIK------KLAAFEGLGSDNVYLIK--TD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADIC 394 (629)
Q Consensus 324 Si~------kaa~~lGlg~~~v~~V~--~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~ 394 (629)
+-. +-+...|+ .+..++ +| ++|.+|.++|++.+.. ..|.+|++. .+..-..-|+++|+++|
T Consensus 253 shg~~~~~g~~vs~sG~---~~~~vpY~~d~~~g~IDyd~lek~a~~-----~rPKLII~g--~Saypr~~D~~~i~eIA 322 (586)
T PLN02271 253 SHGYYTPGGKKVSGASI---FFESLPYKVNPQTGYIDYDKLEEKALD-----FRPKILICG--GSSYPREWDYARFRQIA 322 (586)
T ss_pred hcccccccccccccccc---eEEEEEcccccccCccCHHHHHHHhhh-----cCCeEEEEC--chhccCcCCHHHHHHHH
Confidence 432 23355565 566666 64 5799999999986543 257777663 33333677899999999
Q ss_pred HHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccc
Q psy1785 395 AEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLF 472 (629)
Q Consensus 395 ~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~ 472 (629)
+++|+++.| |+..+.+... .+.. .+.. ||+++.+.||||.+|.| |+++++++.. . .. ......
T Consensus 323 devGA~LmvD~AH~aGLIa~g--------~~~s-P~~~-aDvvt~TTHKtLrGPrG-G~I~~r~~~~-~-~~--~g~~gs 387 (586)
T PLN02271 323 DKCGAVLMCDMAHISGLVAAK--------ECVN-PFDY-CDIVTSTTHKSLRGPRG-GIIFYRKGPK-L-RK--QGMLLS 387 (586)
T ss_pred HHcCCEEEEECcccccccccC--------cCCC-CCcC-CcEEEeCCcccCCCCCc-eEEEeccccc-c-cc--cCCccc
Confidence 999999999 6555544322 1111 1345 99999999999999999 8888876311 1 00 000000
Q ss_pred cCCc--CCCc--ccC-CCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCce
Q psy1785 473 QKDK--FYDT--KYD-SGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECT 546 (629)
Q Consensus 473 ~~~~--~~~~--~~~-~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~ 546 (629)
.... .++. ..+ ..-..+|+|-.. ...++..+++......|++..++.+++|+.|.+.|.+. ||+++..--+..
T Consensus 388 ~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnH 466 (586)
T PLN02271 388 HGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNH 466 (586)
T ss_pred cccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcc
Confidence 0000 0000 000 011245666554 45666677777777788999999999999999999987 999987334445
Q ss_pred EEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeee--ecCC---ccceEEEee---cCCCCCHHHHHHH
Q psy1785 547 NISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQ--PIHA---LPNFFRLVL---QNSALDHSDMDYF 618 (629)
Q Consensus 547 ~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~--~~~~---~~~~lR~~~---~n~~~t~edid~l 618 (629)
.|...+.+.++.| ....+.|-+.|..+ .-. |.+. .+.-||+.. +.....++|++.+
T Consensus 467 lvLvDl~~~g~~G---------------~~ae~~Le~~~I~~-Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~i 530 (586)
T PLN02271 467 LLLWDLTTLGLTG---------------KNYEKVCEMCHITL-NKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETI 530 (586)
T ss_pred eeeecCcccCCCH---------------HHHHHHHHHcCeEe-ccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHH
Confidence 5555554433332 13344555556432 211 1111 123589987 3345578999998
Q ss_pred HHHHHHHh
Q psy1785 619 IDEIERLG 626 (629)
Q Consensus 619 ~~~i~~l~ 626 (629)
.+.|.++.
T Consensus 531 A~~i~~~~ 538 (586)
T PLN02271 531 ADFLLRAA 538 (586)
T ss_pred HHHHHHHH
Confidence 88887664
No 102
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.55 E-value=3.3e-12 Score=137.74 Aligned_cols=293 Identities=11% Similarity=0.094 Sum_probs=183.8
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
..++.+.+++++|. ...+++++|+++++.++.... .|...|+++...|.+...++...|. .
T Consensus 86 ~~~l~~~la~~~~~--~~~i~~~~g~~~~~~~l~~~~--------------~~gd~V~~~~~~~~~~~~~~~~~g~---~ 146 (385)
T PRK05958 86 HEALEEELAEWFGA--ERALLFSSGYAANLAVLTALA--------------GKGDLIVSDKLNHASLIDGARLSRA---R 146 (385)
T ss_pred HHHHHHHHHHHhCC--CcEEEECcHHHHHHHHHHHhC--------------CCCCEEEEeCccCHHHHHHHHhcCC---c
Confidence 45566778888884 467888888888776554221 1344677788999999999998888 8
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
++.++. .|+++|++.+... .....+++.....+.+|.++|+++|+++|+++|+++++ +++.+.+-.. .
T Consensus 147 ~~~~~~-----~d~~~l~~~i~~~---~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~--g 216 (385)
T PRK05958 147 VRRYPH-----NDVDALEALLAKW---RAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQ--G 216 (385)
T ss_pred eEEeCC-----CCHHHHHHHHHhc---cCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCC--C
Confidence 888875 4888998888642 11244555555667889999999999999999999999 6643322100 0
Q ss_pred ccccccccccccC-CcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC-
Q psy1785 417 CSVFLTRRNYVIE-VVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK- 494 (629)
Q Consensus 417 ~~~~l~~~~~~i~-~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~- 494 (629)
.+. .... ++. ..-+.+..++||+++.+ + |.++. ++............|.. .++..
T Consensus 217 ~~~-~~~~--~~~~~~~~i~~~s~sK~~~~~-G-g~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~ 273 (385)
T PRK05958 217 RGL-AAEA--GLAGEPDVILVGTLGKALGSS-G-AAVLG-SETLIDYLINRARPFIF-----------------TTALPP 273 (385)
T ss_pred Cch-HHhh--CCCCCCceEEEEechhhcccC-C-cEEEc-CHHHHHHHHHhCcccee-----------------cCCCCH
Confidence 000 0100 111 11347789999999753 3 55544 43433322111111111 11111
Q ss_pred cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHH
Q psy1785 495 PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVA 574 (629)
Q Consensus 495 ~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~ 574 (629)
..+..++.+++.+... .++.++..++.+++.+.|++. +++++ ++..+.++|.+. .. ...
T Consensus 274 ~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~~-~~---------------~~~ 332 (385)
T PRK05958 274 AQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLM--DSQSAIQPLIVG-DN---------------ERA 332 (385)
T ss_pred HHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC--CCCCCEEEEEeC-CH---------------HHH
Confidence 2334455556554322 567788888999999999986 67754 456666666642 10 011
Q ss_pred HHHHHHHHhcCcEEEeeeec--CCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 575 PKIKERMMKSGSMMITYQPI--HALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 575 ~~i~~~l~~~G~~~i~~~~~--~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.++.++|.++|..+...... ....+++|+++. ..++++|++.+++.|+++
T Consensus 333 ~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 333 LALAAALQEQGFWVGAIRPPTVPAGTSRLRITLT-AAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHHHHHCCceEecccCCCCCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence 36778888888654321111 111358999995 889999999999999865
No 103
>KOG0630|consensus
Probab=99.53 E-value=1.3e-13 Score=143.56 Aligned_cols=281 Identities=20% Similarity=0.207 Sum_probs=196.5
Q ss_pred hHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCe-------EEeCCchhhHHHHHHHHHHhhchh-
Q psy1785 230 PYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDG-------IFCPGGSMANGYAISCARHHAFPQ- 301 (629)
Q Consensus 230 ~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g-------~~~~GgT~an~~al~~ar~~~~~~- 301 (629)
...++...+-+|+.- ......-..+..+.-.+-.|+..||.+.++.. .|...-..+...++..|....++-
T Consensus 139 ~~aliSaSikaYid~-Ldrhh~~rian~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~d 217 (838)
T KOG0630|consen 139 HLALISASIKAYIDH-LDRHHLLRIANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGD 217 (838)
T ss_pred hHHHHHHHHHHHHHH-hhHHHHHHHHHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCc
Confidence 334444444454421 11122223444555666788999998876432 222223345566777776654443
Q ss_pred -HHhcCCC--CCCCeEEEEcCCcchHH-HHHHHHcCCCCCCEEEEecCC----CCCCCHHHHHHHHHHHHhCCCCcEEEE
Q psy1785 302 -IKTQGLA--SCPRLVLYTSEDAHYSI-KKLAAFEGLGSDNVYLIKTDA----RGRMLPESLRGEIQRTLAEGAVPFMVS 373 (629)
Q Consensus 302 -~~~~G~~--~~p~~vv~~s~~~H~Si-~kaa~~lGlg~~~v~~V~~d~----~g~~d~~~Le~~i~~~~~~g~~~~~Vv 373 (629)
..+.|+. .....++|.|+..|.-. ..+|+-+||....+..++-.+ .|+||...+++.|+++...|.+|++++
T Consensus 218 hs~eG~~afaa~aaPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLili 297 (838)
T KOG0630|consen 218 HSLEGGIAFAALAAPTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILI 297 (838)
T ss_pred cccccccchHhhcCceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEE
Confidence 2333432 12345789999999864 467899999655555555333 369999999999999999999999999
Q ss_pred EeeCCCccccccCHHHHHHHHHHcC-CeEEE-ecCcccccccccccccccccccc---ccCCcceEEEeCCCCCCCCCCc
Q psy1785 374 ATSGTTVLGAFDPIPAIADICAEYD-MADSV-TWNPHKLLTAPQQCSVFLTRRNY---VIEVVADSVTWNPHKLLTAPQQ 448 (629)
Q Consensus 374 at~Gtt~~G~idpl~ei~~i~~~~~-~~lhV-A~gg~~l~~~~~~~~~~l~~~~~---~i~~gaDsv~~~~HK~l~~P~~ 448 (629)
+..|++..|..|-|-+|.++|++++ +|+|+ ..+-..+.+. +.... -.+. .||++.+.--|||+|..
T Consensus 298 a~iGasi~GqnDmi~kildi~eahakfWLHasGhaiAALt~a--------epnnil~HV~eq-ldSMal~ialWLGiPSa 368 (838)
T KOG0630|consen 298 ADIGASICGQNDMILKILDICEAHAKFWLHASGHAIAALTCA--------EPNNILGHVEEQ-LDSMALNIALWLGIPSA 368 (838)
T ss_pred EeccchhhcchHHHHHHHHHHHHhhheeEeeccchhhheeec--------CcccchhHHHHH-HhhccchhHHHhCCCCC
Confidence 9999999999999999999999997 99999 5555555443 21111 1355 99999999999999976
Q ss_pred cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHH
Q psy1785 449 CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTD 528 (629)
Q Consensus 449 ~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~ 528 (629)
--+++-|.-+- .+.+ -|.. ..-.+|+.+++.+|.+++++|...+..+++..+.+++-+.+
T Consensus 369 PiV~LHRPleg--~aaS-----afes-------------dpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe 428 (838)
T KOG0630|consen 369 PIVLLHRPLEG--SAAS-----AFES-------------DPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFE 428 (838)
T ss_pred ceEEeeccccc--ccch-----hccc-------------ChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 65555554211 1100 1111 11245677999999999999999999999999999999999
Q ss_pred HHhcCCCcEEEc
Q psy1785 529 KIRHRPGFKLVL 540 (629)
Q Consensus 529 ~L~~~~g~~l~~ 540 (629)
.+.++++++++.
T Consensus 429 ~aSa~~eiemig 440 (838)
T KOG0630|consen 429 GASACEEIEMIG 440 (838)
T ss_pred HhhcCCceeEec
Confidence 999999999885
No 104
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.52 E-value=1.3e-11 Score=133.92 Aligned_cols=307 Identities=13% Similarity=0.095 Sum_probs=191.0
Q ss_pred cccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|...+....+++.+.+++.+..|. +..+.++|+|+++++..++.+.. .|...|++..-+|.++.
T Consensus 66 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--------------~~g~~Vlv~~p~y~~~~ 131 (391)
T PRK08361 66 YTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLL--------------EEGDEVIIPDPAFVCYV 131 (391)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhc--------------CCCCEEEEcCCCCcccH
Confidence 433455666777777777766664 44688999999998776655432 13345677778888888
Q ss_pred HHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~l 401 (629)
..+...|+ +++.+|++++ +.+|+++|++.+.. .+.+|+.+..++.+|.+-| +++|.++|+++++++
T Consensus 132 ~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~------~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~i 202 (391)
T PRK08361 132 EDAKIAEA---KPIRIPLREENEFQPDPDELLELITK------RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYI 202 (391)
T ss_pred HHHHHcCC---EEEEEecCCccCCCCCHHHHHHhccc------ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEE
Confidence 99999998 9999999764 47999999988864 2345667778999999988 888899999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
++ +|.....-..+. .+ .. ......+.++.+++|.++.| | +|.+++.+ +.+....... .+..
T Consensus 203 i~De~y~~~~~~~~~~-~~----~~--~~~~~~~i~~~s~SK~~~~~-GlRiG~~~~~~-~~~~~~~~~~-~~~~----- 267 (391)
T PRK08361 203 LSDEPYEHFLYEGAKH-YP----MI--KYAPDNTILANSFSKTFAMT-GWRLGFVIAPE-QVIKDMIKLH-AYII----- 267 (391)
T ss_pred EEEcccccceeCCCCC-CC----Hh--hcCCCCEEEEecCchhcCCc-HhhhhhhccCH-HHHHHHHHHH-hhhc-----
Confidence 99 776543211100 00 00 11112568889999999866 4 78887744 4444321110 0100
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcCh----hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE-Ee
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGT----DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF-WY 552 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~----~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F-~~ 552 (629)
. +. ..+...++...+.. +.+++..++..+..+.+.+.|++.+++++. .|+-+.+++ ++
T Consensus 268 ---------~---~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~--~p~g~~~~~~~l 330 (391)
T PRK08361 268 ---------G---NV---ASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF--EPKGAFYVFANI 330 (391)
T ss_pred ---------c---CC---ChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec--CCCEEEEEEEEC
Confidence 0 00 11222222222211 345666677777888899999988888754 355544433 22
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+...+ . .++.+.|.+ .|..+..+.... ...++||++++ . ++++++..++.|+++.+.
T Consensus 331 ~~~~~~----~-----------~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~--~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 331 DETGMS----S-----------EDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA-T--SKEKLIEAMERMEKALEE 390 (391)
T ss_pred CCCCCC----H-----------HHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec-C--CHHHHHHHHHHHHHHHhc
Confidence 211111 0 245556654 576543322222 12368999996 3 567888888888776654
No 105
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.51 E-value=1.7e-11 Score=133.66 Aligned_cols=297 Identities=10% Similarity=0.105 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
..++.+.+++++|. ...++.++|+++|..++...... .+..+|++....|.|+..+....|. +
T Consensus 92 ~~~le~~la~~~g~--~~~~~~~SG~~An~~ai~~l~~~------------~~g~~I~~~~~~H~s~~~~~~~~g~---~ 154 (406)
T PRK13393 92 HVLLEAELADLHGK--EAALLFTSGYVSNWAALSTLGSR------------LPGCVILSDELNHASMIEGIRHSRA---E 154 (406)
T ss_pred HHHHHHHHHHHhCC--CcEEEeCCcHHHHHHHHHHhhcC------------CCCCEEEEccchhHHHHHHHHHcCC---e
Confidence 35555678899885 36777778888998888743221 1334788888999999999888775 6
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
++.++. .|+++|++.++... ...+.+|+.....+..|.+.|+++|.++|++++++++| +++.+.+ .+ ..
T Consensus 155 ~~~~~~-----~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~-~G 225 (406)
T PRK13393 155 KRIFRH-----NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLY-GP-RG 225 (406)
T ss_pred EEEeCC-----CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccccc-CC-CC
Confidence 777763 47888888776431 12355677777888999999999999999999999999 6653321 21 11
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC-c
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK-P 495 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~ 495 (629)
.+. .... ++....|.+..++-|.++.+- |++. .++............|.+ ..+.. .
T Consensus 226 ~g~-~~~~--~~~~~~~i~~~tlsKa~g~~G--G~~~-~~~~~~~~l~~~~~~~~~-----------------t~~~~p~ 282 (406)
T PRK13393 226 GGI-AERE--GLADRLTIIEGTLAKAFGVMG--GYIT-GSAALCDFIRSFASGFIF-----------------TTSLPPA 282 (406)
T ss_pred Cch-hhhc--CCCCCCeEEEEeCchhhcccC--ceee-CCHHHHHHHHHhCcCcee-----------------cCccCHH
Confidence 111 0111 222226888889999998642 4444 343433322111111211 11112 2
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
.+..+..+++.+-..+. ...+..+++++|++.|++. |++++. +..+++.+.. +. . ....
T Consensus 283 ~~aa~~aaL~~~~~~~~--~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~i~~v~~-~~---------~------~~~~ 341 (406)
T PRK13393 283 VAAGALASVRHLKASSA--ERERHQDRVARLRARLDKA-GIPHLP--NPSHIVPVMV-GD---------P------VLCK 341 (406)
T ss_pred HHHHHHHHHHHHhhCHH--HHHHHHHHHHHHHHHHHHc-CCCcCC--CCCCeEEEEe-CC---------H------HHHH
Confidence 34455556665433332 2355678899999999886 777653 4555555543 11 0 0123
Q ss_pred HHHHHHHhc-CcEEEeeeec----CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 576 KIKERMMKS-GSMMITYQPI----HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 576 ~i~~~l~~~-G~~~i~~~~~----~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
++.++|.++ |.+. ..... .+ .+.+|+++. ..+|++|||++++.|+++.++
T Consensus 342 ~l~~~L~~~~Gi~v-~~~~~p~~p~g-~~~iRis~~-~~~t~edid~l~~~l~~~~~~ 396 (406)
T PRK13393 342 QISDELLDRYGIYV-QPINYPTVPRG-TERLRITPS-PLHTDADIEHLVQALSEIWAR 396 (406)
T ss_pred HHHHHHHHhCCEEE-EeECCCCCCCC-CceEEEEEC-CCCCHHHHHHHHHHHHHHHHh
Confidence 577788774 7543 32211 12 257999995 999999999999999987654
No 106
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.51 E-value=4.1e-12 Score=135.25 Aligned_cols=284 Identities=14% Similarity=0.138 Sum_probs=181.1
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+..+.++++|+++++..++.+... +...|++..-++..+...+...|+ ++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~--------------~gd~v~~~~p~y~~~~~~~~~~g~---~~ 119 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLE--------------PGDAVLVPPPTYSMYEISAKIHGA---EV 119 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCHHHHHHHHHHcCC---eE
Confidence 4566778888888777899999999886555443211 233455555555555667788898 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--CCeEEE--ecCccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--DMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~~~lhV--A~gg~~l~~~~~ 415 (629)
+.+|++++|.+|++.|++.+.. .+.+|+.+...+.+|.+-|++++.++|+.+ ++++++ +|+.......
T Consensus 120 ~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~-- 191 (346)
T TIGR01141 120 VKVPLDEDGQLDLEDILVAIDD------KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPS-- 191 (346)
T ss_pred EEeccCCCCCCCHHHHHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCcc--
Confidence 9999998899999999887532 344666778889999999999999999987 898888 6653221100
Q ss_pred cccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
...++. ...-+.+..+++|+++.| ..+|.+++++ .++......... + +
T Consensus 192 -~~~~~~------~~~~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~~~~~~~~~~-----------------~---~--- 240 (346)
T TIGR01141 192 -TLPLLA------EYPNLIVLRTLSKAFGLAGLRIGYAIANA-EIIDALNKVRAP-----------------F---N--- 240 (346)
T ss_pred -HHHHHh------hCCCEEEEehhhHhhhchhhhceeeecCH-HHHHHHHhccCC-----------------C---C---
Confidence 000000 011346678999999655 3478888754 444332111000 0 0
Q ss_pred cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhH
Q psy1785 495 PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKV 573 (629)
Q Consensus 495 ~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~ 573 (629)
...+....+...+... .+++..++..++++++++.|++++|+++. ++....+.|.+.. .
T Consensus 241 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~--~~~g~~~~~~~~~---~--------------- 300 (346)
T TIGR01141 241 LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY--PSDANFVLIRFPR---D--------------- 300 (346)
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC--CCcCCEEEEecCC---C---------------
Confidence 0112222222333222 47777888888999999999998898854 3444455554321 0
Q ss_pred HHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 574 APKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 574 ~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..++.++|.+.|..+.......+..+++|++++ +++|++++++.|+
T Consensus 301 ~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 301 ADALFEALLEKGIIVRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 135677888888654332222122468999974 7899999998874
No 107
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.51 E-value=2.7e-11 Score=131.78 Aligned_cols=307 Identities=14% Similarity=0.122 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCC-CCCCeEEEEcCCcchHHHHHHHHcCC-
Q psy1785 257 LMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLA-SCPRLVLYTSEDAHYSIKKLAAFEGL- 334 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~-~~p~~vv~~s~~~H~Si~kaa~~lGl- 334 (629)
.+..++-+.+++++|.+ ..++.+.|..+|+.++.+.... .+-..+.+.+ .....+|+.....|.|+..++++..-
T Consensus 147 ~~h~~LE~~LA~f~g~e--~all~sSGy~AN~~~i~aL~~~-~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~ 223 (476)
T PLN02955 147 TYHRLLESSLADLKKKE--DCLVCPTGFAANMAAMVAIGSV-ASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQ 223 (476)
T ss_pred HHHHHHHHHHHHHHCCC--cEEEECChHHHHHHHHHHHhhc-cccccccccccCCCCcEEEEeccchHHHHHHHHhcccc
Confidence 34456666799999876 5788999999998777654210 0000000000 02356788999999999999998732
Q ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccc
Q psy1785 335 GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLT 412 (629)
Q Consensus 335 g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~ 412 (629)
|..+++.++ .-|+++|++.|+.... ...+|+.-.-.+..|.+-|+++|.++|++||.++.| |++.+.+ .
T Consensus 224 ~~a~~~~f~-----HND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~-G 294 (476)
T PLN02955 224 GNVEVFVYR-----HCDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVC-G 294 (476)
T ss_pred CCceEEEeC-----CCCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCcee-c
Confidence 112666666 4689999999976432 223455555678889999999999999999999999 8876553 2
Q ss_pred ccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 413 APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
+ -.-+ ....+++....|.++.+.-|.+|.. .|+++. ++...+........|++... .
T Consensus 295 ~-~G~G---~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~g-s~~~~~~l~~~~~~~ifSta----------------l 351 (476)
T PLN02955 295 E-NGGG---VAEEFNCEADVDLCVGTLSKAAGCH--GGFIAC-SKKWKQLIQSRGRSFIFSTA----------------I 351 (476)
T ss_pred C-CCCc---HHHHhCCCCCCcEEEEeCccchhcc--Cceeec-HHHHHHHHHHhCCCCeeccc----------------c
Confidence 2 0000 0011233333899999999998864 244444 43444433333445554321 0
Q ss_pred CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 493 RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
....+...-.+++.+-.+ ..+.++..++.++|++.+ |+.+ ..+++.+.+..+ +
T Consensus 352 pp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~-----~sPI~pI~ig~~----------------~ 404 (476)
T PLN02955 352 PVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI-----SSPIISLVVGNQ----------------E 404 (476)
T ss_pred cHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC-----CCCEEEEEeCCH----------------H
Confidence 111222233334433222 235677888889998742 5542 245555544210 1
Q ss_pred HHHHHHHHHHhcCcEEEe--ee-ecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 573 VAPKIKERMMKSGSMMIT--YQ-PIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~--~~-~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+..+.++|.++|..... |. ...+. .-+|++++ ..+|++|||++++.|.++..
T Consensus 405 ~a~~~~~~L~~~Gi~v~~i~yPtVP~g~-~rLRi~ls-A~Ht~edId~lv~~L~~~~~ 460 (476)
T PLN02955 405 KALKASRYLLKSGFHVMAIRPPTVPPNS-CRLRVTLS-AAHTTEDVKKLITALSSCLD 460 (476)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCC-ceEEEeeC-CCCCHHHHHHHHHHHHHHHh
Confidence 124678899999965322 21 11233 36999996 99999999999999987643
No 108
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.50 E-value=5.2e-11 Score=129.05 Aligned_cols=308 Identities=11% Similarity=0.128 Sum_probs=181.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+ ..++.++|+.++..++.+. . .|...|+++...|.|+..++.+.+. ++
T Consensus 46 ~~LE~~lA~~~g~e--~al~~~sG~~a~~~~i~~l-~-------------~~GD~Vl~~~~~h~s~~~~~~l~~~---~~ 106 (392)
T PLN03227 46 LELEQCMAEFLGTE--SAILYSDGASTTSSTVAAF-A-------------KRGDLLVVDRGVNEALLVGVSLSRA---NV 106 (392)
T ss_pred HHHHHHHHHHhCCC--cEEEecCcHHHHHHHHHHh-C-------------CCCCEEEEeccccHHHHHHHHHcCC---eE
Confidence 44455688888875 5677788888887555542 1 2556788999999999988877776 77
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhC--------CCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAE--------GAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~--------g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
+.++.+ |++++++.++....+ ...+.+|+.-.-.+..|.+-|+++|.++|++||+++++ +++...
T Consensus 107 ~~~~~~-----d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~ 181 (392)
T PLN03227 107 RWFRHN-----DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGT 181 (392)
T ss_pred EEeCCC-----CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccc
Confidence 777643 466676666544321 12345566666677889999999999999999999999 665221
Q ss_pred ccccccccccccccccccc--CCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 410 LLTAPQQCSVFLTRRNYVI--EVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~~i--~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
+...-. + ...++|+ ..++|.++.+.+|.++ |.+ |++..++ +...........+.+
T Consensus 182 -~g~~G~-g---~~~~~g~~p~~~~Div~~slsk~~g-~~g-g~v~~~~-~~~~~~~~~~~~~~~--------------- 238 (392)
T PLN03227 182 -LGKSGR-G---SLEHAGLKPMVHAEIVTFSLENAFG-SVG-GMTVGSE-EVVDHQRLSGSGYCF--------------- 238 (392)
T ss_pred -cCCCCC-c---HHHHcCCCCCCCceEEEeechhhhh-ccC-cEEecCH-HHHHHHHHhCcCccc---------------
Confidence 111000 0 0011122 1258999999999876 432 4444443 333221110111111
Q ss_pred cCCCCCCcchHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc---------cCCCceEEEEEeeCCCC
Q psy1785 488 HIQCGRKPDVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL---------DEPECTNISFWYIPPSL 557 (629)
Q Consensus 488 ~~~~sr~~~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~---------~~p~~~~v~F~~~p~~~ 557 (629)
++ ....+..|.++..+ ...--++++++..+++++|++.|++. ++..+. ..+..+++.+.+.+...
T Consensus 239 ---~~-~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~ 313 (392)
T PLN03227 239 ---SA-SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEA 313 (392)
T ss_pred ---cC-CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHH
Confidence 11 11122333333221 11112467788889999999999862 332211 02345667776532110
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEee--e-----ecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITY--Q-----PIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~--~-----~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.. .. .-..+..++.+.|.++|.+.... . +.-. +..+|++++ ..+|++|||++++.|+++.++
T Consensus 314 ~~-----~~--~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P-~~~iR~~~~-~~~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 314 TR-----RT--DETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVP-PPCLRVVAN-ASHTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred hh-----hh--hhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCC-CceEEEEec-CCCCHHHHHHHHHHHHHHHHH
Confidence 00 00 00112347888999999755321 0 1111 246899995 999999999999999987654
No 109
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.49 E-value=3.1e-13 Score=144.49 Aligned_cols=233 Identities=20% Similarity=0.213 Sum_probs=151.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++++|.+. .-.++.|.|.+|..++.++.. |...|++...+|-|+..++.+.|+ ..
T Consensus 69 ~eAe~~aA~~fGAd~-t~flvnGsT~g~~a~i~a~~~--------------~gd~VLv~RN~HkSv~~alil~ga---~P 130 (417)
T PF01276_consen 69 KEAEELAARAFGADK-TFFLVNGSTSGNQAMIMALCR--------------PGDKVLVDRNCHKSVYNALILSGA---IP 130 (417)
T ss_dssp HHHHHHHHHHHTESE-EEEESSHHHHHHHHHHHHHTT--------------TTCEEEEETT--HHHHHHHHHHTE---EE
T ss_pred HHHHHHHHHhcCCCe-EEEEecCchHHHHHHHHHhcC--------------CCCEEEEcCCcHHHHHHHHHHcCC---eE
Confidence 666778999999864 234455556666666665532 556789999999999999999999 88
Q ss_pred EEEecCCC-----CCCCH-----HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 340 YLIKTDAR-----GRMLP-----ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 340 ~~V~~d~~-----g~~d~-----~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
++|+...+ +.+++ +.++++|++...... +-+|+.| .+|..|.+-||++|+++|+++++.++| |||+
T Consensus 131 vyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~-~~~vvlt-~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa 208 (417)
T PF01276_consen 131 VYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKA-PRLVVLT-SPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGA 208 (417)
T ss_dssp EEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHC-ESEEEEE-SS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-T
T ss_pred EEecCCccccCCccCCChhhhhHHHHHHHHHhCccccC-ceEEEEe-CCCCCeEEECHHHHHHHhcccCCEEEEEccccc
Confidence 88877422 35677 889888887433221 2334444 578889999999999999999999999 9999
Q ss_pred cccccccccccccccccccccCCcce-------EEEeCCCCCCCCCCccEEEEEeccc-hhhhhhcCCCCccccCCcCCC
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVAD-------SVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaD-------sv~~~~HK~l~~P~~~g~ll~r~~~-~l~~~~~~~~~yl~~~~~~~~ 479 (629)
|.-+.+ ..+. .+..||| .++-+.||.|.+-.|++++.+++.. .-...+... -.+.
T Consensus 209 h~~F~~--------lp~~-a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~-l~~~------- 271 (417)
T PF01276_consen 209 HFGFHP--------LPRS-ALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEA-LSMH------- 271 (417)
T ss_dssp TGGCSG--------GGTT-CSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHH-HHHH-------
T ss_pred cccCCC--------Cccc-hhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHH-HHHH-------
Confidence 987764 1222 2455788 9999999999999999999999864 222211100 0011
Q ss_pred cccCCCCccCCCCCCcch--HHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHH---hcCCCcEEEc
Q psy1785 480 TKYDSGDKHIQCGRKPDV--LKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKI---RHRPGFKLVL 540 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~a--l~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L---~~~~g~~l~~ 540 (629)
|.|-+.-. ..+=.+.+.+ +.+| ++++++.++++++++++| .++++|+++.
T Consensus 272 ----------~TTSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~ 327 (417)
T PF01276_consen 272 ----------QTTSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLG 327 (417)
T ss_dssp ----------S-SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS
T ss_pred ----------cCCChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCC
Confidence 11112111 1111222333 3344 567888888999999998 6788888876
No 110
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.49 E-value=2.1e-11 Score=131.81 Aligned_cols=299 Identities=13% Similarity=0.136 Sum_probs=182.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG 335 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg 335 (629)
..+-.++.+++++++|.+ ..+++++|+++++.++.+... |..+|++....|.+...++...|.
T Consensus 77 ~~l~~~l~~~l~~~~g~~--~~i~~~sG~~a~~~a~~~~~~--------------~gd~vi~~~~~~~~~~~~~~~~g~- 139 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTE--AALVFQSGFNTNQGVLSALLR--------------KGDIVLSDELNHASIIDGLRLTKA- 139 (385)
T ss_pred cHHHHHHHHHHHHHhCCC--cEEEECcHHHHHHHHHHHhCC--------------CCCEEEEEccccHHHHHHHHhcCC-
Confidence 344566777888888864 345555668887766654321 334677788899999888888776
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
+++.++ .+|+++|++.+.+... ..+.+|+.....+.+|.+.|+++|.++|++||+++++ +++.+.+-..
T Consensus 140 --~~~~~~-----~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~ 210 (385)
T TIGR01825 140 --TKKIYK-----HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEA 210 (385)
T ss_pred --ceEEeC-----CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCC
Confidence 665553 5889999888875322 2345666665668889999999999999999999999 6643322100
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC-
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG- 492 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s- 492 (629)
...+ ...+++..+.|.+..+++|+++.+. |+++. +++...........|.. .++
T Consensus 211 ~~~~-----~~~~~~~~~~~i~~~s~sK~~~~~g--G~~~~-~~~~~~~~~~~~~~~~~-----------------~~~~ 265 (385)
T TIGR01825 211 GRGT-----VHHFGLEDKVDIQVGTLSKAIGVVG--GYAAG-HKELIEYLKNRARPFLF-----------------STAQ 265 (385)
T ss_pred CCcc-----HhhcCCCcCCcEEEEeccHHhhcCC--CEEec-CHHHHHHHHHhCccccc-----------------cCCC
Confidence 0000 0001222347899999999997643 55544 43444332111111111 111
Q ss_pred CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 493 RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
.......+..+++.+... .+..++..++++++.+.|++. |+++.. |..+.+.+...+ . .
T Consensus 266 ~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~-~---------~------ 324 (385)
T TIGR01825 266 PPAVVAALAAAVDELQRS--PELMERLWDNTRFFKAGLGKL-GYDTGG--SETPITPVVIGD-E---------K------ 324 (385)
T ss_pred CHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCC--CCCCEEEEEECC-H---------H------
Confidence 111223334444433221 245667778899999999886 888653 444545444311 0 0
Q ss_pred HHHHHHHHHHhcCcEEEeeeec---CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 573 VAPKIKERMMKSGSMMITYQPI---HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~---~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
....+.+.|.++|.+. ..... ....+.+|+++. ..++++||+++++.|+++.++
T Consensus 325 ~~~~~~~~L~~~gi~v-~~~~~~~~~~~~~~iRi~~~-~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 325 AAQEFSRRLFDEGIFA-QSIVFPTVPRGTARIRNIPT-AEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred HHHHHHHHHHHCCcEE-cccCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHHHHHH
Confidence 0135677888888653 22111 111257999985 889999999999999987654
No 111
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.49 E-value=9.2e-12 Score=133.96 Aligned_cols=231 Identities=18% Similarity=0.195 Sum_probs=159.5
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH---
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK--- 327 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k--- 327 (629)
..|....+|+. ++++.|.+ ..+++++|+.|+..++.+... |...|+++...|.+...
T Consensus 38 ~~p~~~~le~~----la~l~g~~--~a~~~~sG~~Ai~~~l~~l~~--------------~gd~Vl~~~~~y~~~~~~~~ 97 (369)
T cd00614 38 GNPTVDALEKK----LAALEGGE--AALAFSSGMAAISTVLLALLK--------------AGDHVVASDDLYGGTYRLFE 97 (369)
T ss_pred CChhHHHHHHH----HHHHHCCC--CEEEEcCHHHHHHHHHHHHcC--------------CCCEEEECCCCcchHHHHHH
Confidence 45666666654 77778764 578889999888877765432 33456777777776543
Q ss_pred -HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 328 -LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 328 -aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
.+...|+ ++..++.+ |+++|++++.+ .+.+|.....++.+|.+.|+++|+++|+++|++++| +
T Consensus 98 ~~~~~~g~---~~~~v~~~-----d~~~l~~~i~~------~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t 163 (369)
T cd00614 98 RLLPKLGI---EVTFVDPD-----DPEALEAAIKP------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNT 163 (369)
T ss_pred HHHhhcCe---EEEEeCCC-----CHHHHHHhcCC------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 3445676 78888754 57888877743 355677788888999999999999999999999999 7
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|+......+ ++.|+|.++.+.+|+++++.. .|+++.+++++.+...... .+
T Consensus 164 ~~~~~~~~~--------------~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~-~~------------ 216 (369)
T cd00614 164 FATPYLQRP--------------LELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLR-LA------------ 216 (369)
T ss_pred CcchhcCCh--------------hhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHH-Hh------------
Confidence 765443211 234699999999999987643 5667665534443321110 00
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC-----------------Cc
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP-----------------EC 545 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p-----------------~~ 545 (629)
.+-....+..|+.++.+ +.+..++++..++++++.+.|++.|+++-+. -| ..
T Consensus 217 --------~g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~-~p~l~~~~~~~~~~~~~~g~g 285 (369)
T cd00614 217 --------LGTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVY-YPGLPSHPQHELAKKQMSGYG 285 (369)
T ss_pred --------hCCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEE-CCCCCCCchHHHHHHhcCCCc
Confidence 01122456677766544 5677889999999999999999998875443 22 35
Q ss_pred eEEEEEee
Q psy1785 546 TNISFWYI 553 (629)
Q Consensus 546 ~~v~F~~~ 553 (629)
++++|.+.
T Consensus 286 ~i~s~~l~ 293 (369)
T cd00614 286 GVFSFELK 293 (369)
T ss_pred eEEEEEeC
Confidence 77888864
No 112
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.48 E-value=1.3e-11 Score=133.45 Aligned_cols=317 Identities=15% Similarity=0.169 Sum_probs=185.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
+|....+| +.+++++|.+ ..+++++||.++..++.+..- .|...|+++..+|.+...++..
T Consensus 28 g~~~~~le----~~la~~~g~~--~~v~~~sgt~al~~~l~al~~-------------~~Gd~Viv~~~~~~~~~~~~~~ 88 (380)
T TIGR03588 28 GPTVPAFE----EALAEYVGAK--YAVAFNSATSALHIACLALGV-------------GPGDRVWTTPITFVATANCALY 88 (380)
T ss_pred ChhHHHHH----HHHHHHHCCC--eEEEEcCHHHHHHHHHHHcCC-------------CCCCEEEeCCcchHHHHHHHHH
Confidence 45444444 4577778775 467778889887666654311 1445678888899999999999
Q ss_pred cCCCCCCEEEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 332 EGLGSDNVYLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 332 lGlg~~~v~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
.|+ +++.+++++ ++.+|+++|+++|.+.. ...+.+|+.+ +.+|...|+++|.++|+++|+++++ ++..+
T Consensus 89 ~G~---~~~~~~~~~~~~~~d~~~l~~~i~~~~--~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g 160 (380)
T TIGR03588 89 CGA---KVDFVDIDPDTGNIDEDALEKKLAAAK--GKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALG 160 (380)
T ss_pred cCC---EEEEEecCCCcCCcCHHHHHHHhhccc--CCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCccc
Confidence 999 999999974 67899999999986321 1124445543 3468889999999999999999999 44332
Q ss_pred ccccccccccccccccccccCCcceEEEeCCC--CCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCC
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVVADSVTWNPH--KLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~H--K~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 486 (629)
... . .+.+|.....|..++++| |++..+ ..|++++.++.+..+.......-...... ....+..+.
T Consensus 161 ~~~-~---------~~~~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~ 228 (380)
T TIGR03588 161 AEY-G---------GKPVGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPL-LFEKQDEGP 228 (380)
T ss_pred Ccc-C---------CEeCCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcc-cccccccCc
Confidence 221 1 111111012699999988 899776 35667776665544321100000000000 000000000
Q ss_pred ccC---CCC--CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC-----ceEEEEEeeCCC
Q psy1785 487 KHI---QCG--RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE-----CTNISFWYIPPS 556 (629)
Q Consensus 487 ~~~---~~s--r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~-----~~~v~F~~~p~~ 556 (629)
+.. ..+ -+..-+...+.+.. .+.+.+++++..++++++.+.|..++++++.. .+. ....++++.+.
T Consensus 229 ~~~~~~~~g~n~~m~~l~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~- 304 (380)
T TIGR03588 229 WYYEQQELGFNYRMTDIQAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLT-IPLGSKSAWHLYPILLDQE- 304 (380)
T ss_pred ceeeeeccccccCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCC-CCCCCEeEEEEEEEEECCc-
Confidence 000 011 12222222222222 34578889999999999999999998877554 221 11222333211
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEE-EeeeecC----------C--cc-------ceEEEeecCCCCCHHHHH
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERMMKSGSMM-ITYQPIH----------A--LP-------NFFRLVLQNSALDHSDMD 616 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~-i~~~~~~----------~--~~-------~~lR~~~~n~~~t~edid 616 (629)
.+.. ..++.+.|.++|... +.+.++. . .+ ..|++.+ ++..|++||+
T Consensus 305 -~~~~------------r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l~~~dv~ 370 (380)
T TIGR03588 305 -FGCT------------RKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPL-HPALTLEQQQ 370 (380)
T ss_pred -CCCC------------HHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCC-CCCCCHHHHH
Confidence 0110 135667777777532 1111111 0 11 4677777 5999999999
Q ss_pred HHHHHHHHH
Q psy1785 617 YFIDEIERL 625 (629)
Q Consensus 617 ~l~~~i~~l 625 (629)
++++.|+++
T Consensus 371 ~i~~~l~~~ 379 (380)
T TIGR03588 371 RVVETLRKV 379 (380)
T ss_pred HHHHHHHHh
Confidence 999999875
No 113
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.47 E-value=3.9e-11 Score=129.52 Aligned_cols=310 Identities=12% Similarity=0.078 Sum_probs=192.0
Q ss_pred cccChhHHHHHHHHHHHHHHHhC--CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVG--FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G--~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|...+....+.+.+.+++.+..| ++..+.++++|+++++..++..... |...|++..-+|..+.
T Consensus 57 Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------------~gd~vl~~~p~y~~~~ 122 (382)
T PRK06108 57 YTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVG--------------PGDEVVAVTPLWPNLV 122 (382)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcC--------------CCCEEEEeCCCccchH
Confidence 44445556677777788888888 5557888999999987665554321 3345666777888888
Q ss_pred HHHHHcCCCCCCEEEEecCCC---CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCe
Q psy1785 327 KLAAFEGLGSDNVYLIKTDAR---GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMA 400 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~---g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~ 400 (629)
..++..|+ +++.+|.+.+ +.+|+++|++.+.. .+.+|+.+...+.+|.+- ++++|.++|+++++|
T Consensus 123 ~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ 193 (382)
T PRK06108 123 AAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITP------RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLW 193 (382)
T ss_pred HHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcE
Confidence 88999998 9999999743 46999999888753 244566677788888664 578888999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+++ +|.....-.. .....++.... ... -..++.+++|.++.| ..+|.++... +.+...... ..|.
T Consensus 194 li~De~y~~~~~~~~-~~~~~~~~~~~--~~~-~~i~~~S~SK~~g~~G~RiG~~~~~~-~~~~~~~~~-~~~~------ 261 (382)
T PRK06108 194 IVADEVYERLYYAPG-GRAPSFLDIAE--PDD-RIIFVNSFSKNWAMTGWRLGWLVAPP-ALGQVLEKL-IEYN------ 261 (382)
T ss_pred EEEehhhhhhccCCC-CCCCCHhhcCC--CcC-CEEEEeechhhccCcccceeeeeCCH-HHHHHHHHH-HHhc------
Confidence 999 6665432100 00000111100 111 357788999988644 5588888754 344332110 0110
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE-EeeCCC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF-WYIPPS 556 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F-~~~p~~ 556 (629)
..+........+..++. .+.+.+++..++..++.+++.+.|++.+++++.. |..+.+++ ++ |..
T Consensus 262 -----------~~~~~~~~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--p~~g~~~~~~l-~~~ 326 (382)
T PRK06108 262 -----------TSCVAQFVQRAAVAALD-EGEDFVAELVARLRRSRDHLVDALRALPGVEVAK--PDGAMYAFFRI-PGV 326 (382)
T ss_pred -----------ccCCChHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC--CCeeEEEEEeC-CCC
Confidence 00111111122222232 2345567788888889999999999888888653 55554433 33 211
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.. ..++.+.|. +.|..+.....+. ...+++|++++ . ++++++..++.|+++.
T Consensus 327 ~~---------------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~-~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 327 TD---------------SLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA-R--DPARLDEAVERLRRFL 380 (382)
T ss_pred CC---------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-C--CHHHHHHHHHHHHHHH
Confidence 10 124566664 4676543322221 12358999996 4 8999999999888764
No 114
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.46 E-value=3.4e-11 Score=131.66 Aligned_cols=240 Identities=18% Similarity=0.160 Sum_probs=149.9
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH----
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK---- 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~---- 326 (629)
..|....+|+ .++++.|.+ ..+++.+|+.++..++.... .+...|+++...|.+..
T Consensus 67 ~~pt~~~le~----~la~l~g~~--~~v~fsSG~~Ai~~al~~ll--------------~~Gd~VI~~~~~y~~t~~~~~ 126 (437)
T PRK05613 67 TNPTVEALEN----RIASLEGGV--HAVAFASGQAAETAAILNLA--------------GAGDHIVTSPRLYGGTETLFL 126 (437)
T ss_pred cChHHHHHHH----HHHHHhCCC--eEEEeCCHHHHHHHHHHHhc--------------CCCCEEEECCCccHHHHHHHH
Confidence 3566555544 488888863 56677777777665554321 13446778888888763
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
+.+...|+ ++..++ +. .|+++|+++|.+ .+.+|+....++.+|.+-||++|+++|+++|+.++| +
T Consensus 127 ~~l~~~Gi---~v~~vd-~~---~d~e~l~~~l~~------~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t 193 (437)
T PRK05613 127 VTLNRLGI---EVTFVE-NP---DDPESWQAAVQP------NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNT 193 (437)
T ss_pred HHHHhcCe---EEEEEC-CC---CCHHHHHHhCCc------cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECC
Confidence 44566787 888887 32 288888888764 244566667778889999999999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchh-hhhh--cCCCCccccCCcCCC-
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVL-TECH--SASASYLFQKDKFYD- 479 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l-~~~~--~~~~~yl~~~~~~~~- 479 (629)
++......+ ++.|+|.++.++||+++.+- +.|.+++.+.... .... ...-+++...+....
T Consensus 194 ~a~g~~~~p--------------~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (437)
T PRK05613 194 IATAALVRP--------------LELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHG 259 (437)
T ss_pred CccccccCh--------------HHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCcccccc
Confidence 655443221 34479999999999998653 3466666432211 0000 000000000000000
Q ss_pred c-ccCCCC----------ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 480 T-KYDSGD----------KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 480 ~-~~~~~~----------~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
. ..+.+. +....|-.......|+.++ |.+-+.-++++..++|.++++.|+++|.++-+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V 328 (437)
T PRK05613 260 LKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAKV 328 (437)
T ss_pred ccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 0 000000 0111233345677776665 67888899999999999999999999987544
No 115
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.46 E-value=2.6e-11 Score=130.97 Aligned_cols=316 Identities=14% Similarity=0.125 Sum_probs=186.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
+|....+|+ .+++++|.+ ..++++|||+++..++.+..- .|...|+++..+|.+...++..
T Consensus 32 g~~~~~le~----~la~~~g~~--~~v~~~sgt~al~lal~al~~-------------~~Gd~Viv~~~~~~~~~~~~~~ 92 (379)
T PRK11658 32 GPKNQALEQ----AFCQLTGNQ--HAIAVSSATAGMHITLMALGI-------------GPGDEVITPSLTWVSTLNMIVL 92 (379)
T ss_pred CHhHHHHHH----HHHHHhCCC--eEEEECCHHHHHHHHHHHcCC-------------CCCCEEEECCCcHHHHHHHHHH
Confidence 455545544 477888875 578899999987766654311 1445678888999999889899
Q ss_pred cCCCCCCEEEEecCCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 332 EGLGSDNVYLIKTDAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 332 lGlg~~~v~~V~~d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
.|+ +++.++++.+ +.+|+++|+++|.+ .+.+|+.+ +.+|...|+++|.++|+++|+++++ ++..+
T Consensus 93 ~G~---~~v~vd~~~~~~~~d~~~l~~~i~~------~tkav~~~---~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g 160 (379)
T PRK11658 93 LGA---TPVMVDVDRDTLMVTPEAIEAAITP------RTKAIIPV---HYAGAPADLDAIRAIGERYGIPVIEDAAHAVG 160 (379)
T ss_pred cCC---EEEEEecCCCcCCcCHHHHHHhccc------CCeEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECCCccC
Confidence 998 9999999865 47999999998864 23445433 3478899999999999999999999 55422
Q ss_pred ccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC-CC-ccccCCcC-CCcccCCC
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS-AS-YLFQKDKF-YDTKYDSG 485 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~-~~-yl~~~~~~-~~~~~~~~ 485 (629)
..... +..+ ..|.+.++++.+|.+.++. .|++++.++++..+..... .. +....+.. .....++.
T Consensus 161 ~~~~~----------~~~g-~~g~~~~Sf~~~K~l~~g~-GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 228 (379)
T PRK11658 161 TYYKG----------RHIG-ARGTAIFSFHAIKNITCAE-GGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAE 228 (379)
T ss_pred CeECC----------eecC-CCCCEEEeCCCCCcCcccC-ceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence 22111 1111 2247889999999987643 4555555555554332110 00 00000000 00000000
Q ss_pred CccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC-C---CceEEEEEeeCCCCCCCC
Q psy1785 486 DKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE-P---ECTNISFWYIPPSLRGKE 561 (629)
Q Consensus 486 ~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~-p---~~~~v~F~~~p~~~~~~~ 561 (629)
....|..++...+-+++.....+++++..++..++++++.+.|++++...+..+. + ....+++++.+... +..
T Consensus 229 --~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 305 (379)
T PRK11658 229 --VLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERC-GIS 305 (379)
T ss_pred --eeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccc-cCC
Confidence 0011222222233334444445789999999999999999999988543222211 1 12345555532110 100
Q ss_pred chhhHHHHHhhHHHHHHHHHHhcCcEE-EeeeecCC------------c-------cceEEEeecCCCCCHHHHHHHHHH
Q psy1785 562 DQADFNELLHKVAPKIKERMMKSGSMM-ITYQPIHA------------L-------PNFFRLVLQNSALDHSDMDYFIDE 621 (629)
Q Consensus 562 ~~~~~~~~l~~~~~~i~~~l~~~G~~~-i~~~~~~~------------~-------~~~lR~~~~n~~~t~edid~l~~~ 621 (629)
..++.+.|.++|... +.+.+... . ...+-+-+ ++..|++|++++++.
T Consensus 306 ------------r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~-~~~l~~~~~~~i~~~ 372 (379)
T PRK11658 306 ------------RDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPL-FPDMTDADVDRVITA 372 (379)
T ss_pred ------------HHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHH
Confidence 135667777777421 11111110 0 12344333 689999999999999
Q ss_pred HHHHh
Q psy1785 622 IERLG 626 (629)
Q Consensus 622 i~~l~ 626 (629)
|+++.
T Consensus 373 i~~~~ 377 (379)
T PRK11658 373 LQQIA 377 (379)
T ss_pred HHHHH
Confidence 99864
No 116
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.46 E-value=2.9e-11 Score=130.91 Aligned_cols=220 Identities=14% Similarity=0.188 Sum_probs=148.1
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKK 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~k 327 (629)
.|....+|+ .++++.|.+. .+++++|+.++..++.+... |...|+++...|.+ +..
T Consensus 58 ~p~~~~le~----~lA~l~g~~~--av~~~sG~~Ai~~~l~al~~--------------~Gd~Vi~~~~~y~~t~~~~~~ 117 (391)
T TIGR01328 58 NPTVSNLEG----RIAFLEGTEA--AVATSSGMGAIAATLLTILK--------------AGDHLISDECLYGCTFALLEH 117 (391)
T ss_pred CchHHHHHH----HHHHHhCCCc--EEEECCHHHHHHHHHHHHhC--------------CCCEEEEecCcchHHHHHHHH
Confidence 465555554 4888888763 78889998887665543321 33345666665543 344
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++.+ |+++++++|.+ .+.+|.....++.+|.+-|+++|.++|+++|++++| +|
T Consensus 118 ~~~~~G~---~~~~vd~~-----d~e~l~~~i~~------~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~ 183 (391)
T TIGR01328 118 ALTKFGI---QVDFINMA-----IPEEVKAHIKD------NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTF 183 (391)
T ss_pred HHhcCCe---EEEEECCC-----CHHHHHHhhcc------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 5566676 77777764 78888887753 355777777888999999999999999999999999 76
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCcc-EEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQC-SVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~-g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
+.... .. . +..|+|.++.+++|+++.|-.. |.+++.+++++.........++
T Consensus 184 a~~~~-~~-----------~--~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~------------- 236 (391)
T TIGR01328 184 ATPML-TN-----------P--VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDM------------- 236 (391)
T ss_pred chhcc-CC-----------c--hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhC-------------
Confidence 54322 11 0 2336999999999999987652 3444555555543321100000
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.+.....+..|+.++ +.+-+..++++..++++++.+.|++.|+++.+.
T Consensus 237 ------~g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~ 284 (391)
T TIGR01328 237 ------TGSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVY 284 (391)
T ss_pred ------CCCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 111234556677665 456677889999999999999999999986553
No 117
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.45 E-value=3.3e-11 Score=130.50 Aligned_cols=214 Identities=15% Similarity=0.183 Sum_probs=147.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH----HHHHHcCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK----KLAAFEGLG 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~----kaa~~lGlg 335 (629)
.++.+.+++++|.+ ..+++++|+.++..++.+... |...|+++...|.+.. +.+...|+
T Consensus 64 ~~le~~la~l~g~~--~~v~~ssG~~Ai~~al~al~~--------------~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~- 126 (390)
T PRK08133 64 TMFQERLAALEGAE--ACVATASGMAAILAVVMALLQ--------------AGDHVVSSRSLFGSTVSLFEKIFARFGI- 126 (390)
T ss_pred HHHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEccCcchhHHHHHHHHHHHcCc-
Confidence 33445588888865 578999999998877654321 3335667777776543 34566787
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
+++.++.+ |+++|+++|.. .+.+|.....++.+|.+.|+++|.++|+++|+++++ +|+......+
T Consensus 127 --~v~~vd~~-----d~~~l~~~i~~------~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~~~~~~p 193 (390)
T PRK08133 127 --ETTFVDLT-----DLDAWRAAVRP------NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPALQQP 193 (390)
T ss_pred --EEEEECCC-----CHHHHHHhcCc------CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcccccCCc
Confidence 88888764 78888887753 355777777889999999999999999999999999 6644322111
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
++.|+|.++.++||+++.+.. .|.+++.++..+.... .++. .++
T Consensus 194 --------------l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~-----------------~~g 238 (390)
T PRK08133 194 --------------LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLR-----------------TAG 238 (390)
T ss_pred --------------hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHH-----------------HhC
Confidence 233699999999999987643 3344444433333221 1111 012
Q ss_pred CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 493 RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.....+..|..++ |.+.+..++++..+++.++.+.|+++|+++-+.
T Consensus 239 ~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~ 284 (390)
T PRK08133 239 PTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERVF 284 (390)
T ss_pred CCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEE
Confidence 2234556676654 566888999999999999999999999986554
No 118
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.45 E-value=1.3e-11 Score=139.82 Aligned_cols=320 Identities=15% Similarity=0.127 Sum_probs=191.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH-HHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL-AAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka-a~~lGlg~~~ 338 (629)
.++.+.+++++|.+. .-.++.|.|.+|..++.++.. |...|++...+|-|+..+ ..+.|+ .
T Consensus 177 ~eAq~~AA~~fgAd~-tyFlvNGTS~gn~a~i~a~~~--------------~Gd~VLvdRN~HKSv~hgaLiLsGa---~ 238 (720)
T PRK13578 177 KDAQKHAAKVFNADK-TYFVLNGTSASNKVVTNALLT--------------PGDLVLFDRNNHKSNHHGALIQAGA---T 238 (720)
T ss_pred HHHHHHHHHHhCCCc-eEEEeCChhHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHHcCC---e
Confidence 566677999999874 345566666777766665442 456788999999999996 788898 8
Q ss_pred EEEEecCC--C---CCCCHHH-----HHHHHHHH-H--hCCCCcEEEEEeeCCCccccccCHHHHHHH-HHHcCCeEEE-
Q psy1785 339 VYLIKTDA--R---GRMLPES-----LRGEIQRT-L--AEGAVPFMVSATSGTTVLGAFDPIPAIADI-CAEYDMADSV- 403 (629)
Q Consensus 339 v~~V~~d~--~---g~~d~~~-----Le~~i~~~-~--~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i-~~~~~~~lhV- 403 (629)
.++++..- . |.++++. ++++|++. . ++...|+-.++...+|..|.+-++++|+++ ++.++ .+||
T Consensus 239 PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvD 317 (720)
T PRK13578 239 PVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFD 317 (720)
T ss_pred EEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEe
Confidence 88887543 2 3566555 88888764 1 112245434444457888999999999998 68888 9999
Q ss_pred -ecCcccccccccccccccccccc---ccCCcce----EEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCC
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNY---VIEVVAD----SVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKD 475 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~---~i~~gaD----sv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~ 475 (629)
|||+|.-+.+ .++++ .++.|+| .++-|.||.|.+-.|++.+.+++.. +. ....|+....
T Consensus 318 EAhgah~~F~p--------~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~-i~----g~~~~v~~~r 384 (720)
T PRK13578 318 SAWVGYEQFIP--------MMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH-IK----GQARYCPHKR 384 (720)
T ss_pred CcchhhhccCc--------ccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc-cc----cccccCCHHH
Confidence 9999997766 22222 3566899 9999999999999999999997642 11 0001111000
Q ss_pred cCCCcccCCCCccCCCCCCc----chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH-hcCCCcEEEccCCCc-----
Q psy1785 476 KFYDTKYDSGDKHIQCGRKP----DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKI-RHRPGFKLVLDEPEC----- 545 (629)
Q Consensus 476 ~~~~~~~~~~~~~~~~sr~~----~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L-~~~~g~~l~~~~p~~----- 545 (629)
- +..+ ..++.|.+. .++-+...+. .|..| ++++++.++++..+++.| +.+++|+++. +...
T Consensus 385 ~--~~al----~m~qSTSPsY~LmASLDva~~~m-~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~-p~~v~~~~~ 455 (720)
T PRK13578 385 L--NNAF----MLHASTSPFYPLFAALDVNAKMH-EGESG-RRLWMECVKLGIEARKLILARCKLIRPFI-PPVVDGKPW 455 (720)
T ss_pred H--HHHH----HHHcCCChHHHHHHHHHHHHHHH-HHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecc-ccccccccc
Confidence 0 0000 011222222 1122211111 12233 567788888999999988 7788898874 1100
Q ss_pred ---------eEE-EEEeeCCCC----CCCC------chhhHH---HHHh----------hHHHHHHHHHHhcCcEEEeee
Q psy1785 546 ---------TNI-SFWYIPPSL----RGKE------DQADFN---ELLH----------KVAPKIKERMMKSGSMMITYQ 592 (629)
Q Consensus 546 ---------~~v-~F~~~p~~~----~~~~------~~~~~~---~~l~----------~~~~~i~~~l~~~G~~~i~~~ 592 (629)
+.. |+.+.|... .+.. |.-.+. .-++ --...+.+.|.++|. .+..+
T Consensus 456 ~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~gI-~~E~~ 534 (720)
T PRK13578 456 QDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENGI-VPEKC 534 (720)
T ss_pred ccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcCC-EEEec
Confidence 111 222222100 0000 000000 0000 002456777877874 33332
Q ss_pred ecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 593 PIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 593 ~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
. .+.+-+.++ +..|++++++|+++|.++-
T Consensus 535 d----~~~vL~l~s-~g~t~~~~~~Lv~aL~~f~ 563 (720)
T PRK13578 535 D----LNSILFLLT-PAEDMAKLQQLVAMLARFE 563 (720)
T ss_pred C----CCeEEEEeC-CCCCHHHHHHHHHHHHHHH
Confidence 2 234666665 8999999999999998763
No 119
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.45 E-value=3.9e-11 Score=129.39 Aligned_cols=218 Identities=14% Similarity=0.134 Sum_probs=151.3
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH-
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA- 329 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa- 329 (629)
..|....+|+ .++++.|. ...++++||++++..++.+... |...|+++..+|.+.....
T Consensus 51 ~npt~~~Le~----~lA~leg~--e~ivvt~gg~~Ai~~~l~all~--------------~Gd~Il~~~~~y~~~~~~~~ 110 (388)
T PRK08861 51 GNPNRGLLEQ----TLSELESG--KGAVVTNCGTSALNLWVSALLG--------------PDDLIVAPHDCYGGTYRLFN 110 (388)
T ss_pred CCchHHHHHH----HHHHHhCC--CeEEEECCHHHHHHHHHHHHcC--------------CCCEEEEcCCchHHHHHHHH
Confidence 3455555544 47888874 5788999999988766654321 3345666667766544332
Q ss_pred ---HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 330 ---AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 330 ---~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
...|+ +++.++ ..|++++++++.+ .+.+|.....++.+|.+-|+++|.++|+++|++++| +
T Consensus 111 ~~~~~~gi---~v~~vd-----~~d~e~l~~~i~~------~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea 176 (388)
T PRK08861 111 TRANKGDF---KVQFVD-----QSDAAALDAALAK------KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNT 176 (388)
T ss_pred HHHhcCCe---EEEEEC-----CCCHHHHHHhcCc------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECC
Confidence 22344 566654 2578888877753 356788888999999999999999999999999999 7
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|....+..+ ++.|||.++.+.|||+++|.+ .|++..+++.+.++... +..
T Consensus 177 ~~~~~~~~p--------------l~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~-----~~~--------- 228 (388)
T PRK08861 177 FLTPVLQKP--------------LELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAW-----WGN--------- 228 (388)
T ss_pred ccccccCCC--------------cccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHH-----HHh---------
Confidence 765433221 344799999999999999875 56666666544333211 100
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
..|.....+..|+.++ |.+-+.-+++++.++|..+.+.|+++|.++-+
T Consensus 229 -------~~G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V 276 (388)
T PRK08861 229 -------CIGATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTI 276 (388)
T ss_pred -------ccCCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 1122335667786665 67788889999999999999999999987644
No 120
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.45 E-value=4.6e-11 Score=127.48 Aligned_cols=291 Identities=14% Similarity=0.105 Sum_probs=176.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+ ..+++.+|+++++.++.+.. .|...|++....|.+...++...|. ++
T Consensus 64 ~~l~~~la~~~~~~--~~i~~~~G~~~~~~~l~~~~--------------~~gd~v~~~~~~~~~~~~~~~~~g~---~~ 124 (360)
T TIGR00858 64 EELEEELAEWKGTE--AALLFSSGYLANVGVISALV--------------GKGDLILSDALNHASLIDGCRLSGA---RV 124 (360)
T ss_pred HHHHHHHHHHhCCC--CEEEECchHHHHHHHHHHhC--------------CCCCEEEEEccccHHHHHHHHhcCC---ce
Confidence 44556677777743 45666677888776544321 1344677788899999999999888 78
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
+.++. +|+++|++.+.... +..+.+|+.....+.+|.+.|+++|.++|+++++++++ +++.+.+-.. ..
T Consensus 125 ~~~~~-----~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~--~~ 195 (360)
T TIGR00858 125 RRYRH-----NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGED--GR 195 (360)
T ss_pred EEecC-----CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccCcCCC--CC
Confidence 77763 68999998886421 12244555555667889999999999999999999999 6543221110 00
Q ss_pred cccccccccccC-CcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC-c
Q psy1785 418 SVFLTRRNYVIE-VVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK-P 495 (629)
Q Consensus 418 ~~~l~~~~~~i~-~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~ 495 (629)
+. +... ++. .+.|++..+++|+++.+ + |+++. +++...........+. ...+.. .
T Consensus 196 ~~-~~~~--~~~~~~~~i~i~s~sK~~~~~-g-G~~~~-~~~~~~~~~~~~~~~~-----------------~~~~~~~~ 252 (360)
T TIGR00858 196 GT-LEHF--GLKPEPVDIQVGTLSKALGSY-G-AYVAG-SQALIDYLINRARTLI-----------------FSTALPPA 252 (360)
T ss_pred ch-HHhc--CCCccCCcEEEEechhhhhcc-C-cEEEc-CHHHHHHHHHhCccce-----------------ecCCCCHH
Confidence 00 0100 121 23789999999999863 3 65554 3344332111000110 011111 1
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
....+..+++.+. ..++..++..++.+++.+.|++. ++++. ++..+.+.+.+. .. . -..
T Consensus 253 ~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~~~~-~~-------------~--~~~ 311 (360)
T TIGR00858 253 VAAAALAALELIQ--EEPWRREKLLALIARLRAGLEAL-GFTLM--PSCTPIVPVIIG-DN-------------A--SAL 311 (360)
T ss_pred HHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCCEEEEEeC-CH-------------H--HHH
Confidence 2233334444332 23566788888999999999986 67754 344555555432 10 0 013
Q ss_pred HHHHHHHhcCcEEEeeeec--CCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 576 KIKERMMKSGSMMITYQPI--HALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~~~--~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
++.++|.++|..+...... ....+++|++++ ..++++||+.+++.|+
T Consensus 312 ~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 312 ALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLS-AAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHhhC
Confidence 5778888888654321111 112358999996 8899999999998763
No 121
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.44 E-value=4.1e-13 Score=149.29 Aligned_cols=302 Identities=17% Similarity=0.145 Sum_probs=191.8
Q ss_pred ccccccCCCCchHHHHHHHHHHHHHHHHHhhhhccccCCCcccccCChhHHHH-hhcccCCCCCCChhHHHHHHH-HHhh
Q psy1785 78 TSGVCSYESLPEQVRHERFFRDAFEVLLRDGVFKATSRGNKVNEWVNPEELEK-KLELGFNAGPSSHGKLIDLMK-TVIQ 155 (629)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~~~~~~~~~~~V~~~~~p~el~~-~l~~~lp~~~~~~~~ll~~~~-~~l~ 155 (629)
+..+|..|...+ ..+.++.+++.+.+. +++.+.-....|++ .+++. .....+|++|.+.+++++++. ++++
T Consensus 10 ~~~~f~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 82 (522)
T TIGR03799 10 LYRIFTVPEAPD-STLGRIEQKISQNLA-GFLQEHIVAIEKPL-----SEIEKDFSSAEIPEQPTFVSEHTQFLLDKLVA 82 (522)
T ss_pred hhhccCCCCCCc-hHHHHHHHHHHHHHH-HHHHhhhhccCCCc-----hhhhhcccccCCCCCCCChHHHHHHHHHHHHc
Confidence 556677777665 455566666665555 55554222211332 35554 337789999999999999965 6779
Q ss_pred cccccCCcccccccccc-cccCCCCHHHHHHhhcc------CCCCCCCCHHHHHHHHHHHhcccc-----cC--CCCccc
Q psy1785 156 YSVKTGHPYFVNQLFSS-KVNEWVNPEELEKKLEL------GFNAGPSSHAKLIDLMKTVIQYSV-----KT--GHPYFV 221 (629)
Q Consensus 156 y~v~t~hP~F~~~l~s~-~v~~~~~~~~l~~~~~~------~lp~~~~~~~~il~~l~~~~~~~~-----~~--~~p~~~ 221 (629)
++++|+||+||++++++ |.......+ +...+|. ..|.....|.++++|+.+++.... .+ ......
T Consensus 83 ~~~~~~hP~f~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~ 161 (522)
T TIGR03799 83 HSVHTASPSFIGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSL 161 (522)
T ss_pred CCCCCCCCCeEEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCC
Confidence 99999999999999996 211111233 5555552 455555788999999999983210 11 112356
Q ss_pred cccCCCCChHHHHHHHHHHhc--CCCc----cc----c---------ccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCC
Q psy1785 222 NQLFSSVDPYGLVGQWLADAL--NPSV----YT----Y---------EVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPG 282 (629)
Q Consensus 222 g~~~s~~~~~~~~~~~lt~~~--n~~~----~~----~---------~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~G 282 (629)
|.+.+|.+.+++.+-+.+... .... .. + ..--.+...++..+.+.++++|+........+
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp- 240 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIK- 240 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEE-
Confidence 888999999999987776532 1110 00 0 00012334566677788888887543444444
Q ss_pred chhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHH
Q psy1785 283 GSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRT 362 (629)
Q Consensus 283 gT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~ 362 (629)
++.+..+...++++++.+++++|. .|..++.+++++ ..|.+|+ | +.|.+.
T Consensus 241 -~d~~g~~d~~~L~~~i~~~~~~g~--~~~~vvataGtt------------------------~tGaiDp--l-~eIa~i 290 (522)
T TIGR03799 241 -TDANNRIDVDALRDKCAELAEQNI--KPLAIVGVAGTT------------------------ETGNIDP--L-DEMADI 290 (522)
T ss_pred -eCCCCcCCHHHHHHHHHHHHHCCC--CcEEEEEEecCc------------------------CCCCcCC--H-HHHHHH
Confidence 233344445555555655666663 344555556665 4566663 3 445555
Q ss_pred HhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccccc
Q psy1785 363 LAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 363 ~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~ 422 (629)
+++...|+||++++|....- .++.+.+.++....+++++++|+|+..|++|++++.
T Consensus 291 ~~~~g~~lHVDaA~gg~~~~----~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llv 346 (522)
T TIGR03799 291 AQELGCHFHVDAAWGGATLL----SNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLF 346 (522)
T ss_pred HHHcCCeEEEEchhhhHHHh----CHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEE
Confidence 56667999999999865433 366777777666678889999999999999998753
No 122
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.44 E-value=1.8e-10 Score=124.94 Aligned_cols=314 Identities=15% Similarity=0.115 Sum_probs=189.4
Q ss_pred cccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|........+.+.+.+++.+..|. +..+.++++|+++++..++.+... +...|+++.-+|..+.
T Consensus 64 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~--------------~gd~vl~~~p~y~~~~ 129 (393)
T PRK05764 64 YTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLD--------------PGDEVIIPAPYWVSYP 129 (393)
T ss_pred cCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcC--------------CCCEEEecCCCCcchH
Confidence 444445566667777777666554 446789999999987766554321 3345677778888888
Q ss_pred HHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~l 401 (629)
.+++..|+ +++.++.++ .+.+|++.|++++.. ...+|+.+...+.+|.+- ++++|.++|++|++|+
T Consensus 130 ~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~i 200 (393)
T PRK05764 130 EMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITP------KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWV 200 (393)
T ss_pred HHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCc------cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEE
Confidence 88999998 999999974 357899999988753 133556667778889874 5888999999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
++ +|+...+-..+. .+ +..... ... +-+.+..++.|.++.|- -+|.++. ++++..........+
T Consensus 201 i~De~y~~~~~~~~~~-~~-~~~~~~-~~~-~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~~~~~~~~~~~-------- 267 (393)
T PRK05764 201 LSDEIYEKLVYDGAEF-TS-IASLSP-ELR-DRTITVNGFSKAYAMTGWRLGYAAG-PKELIKAMSKLQSHS-------- 267 (393)
T ss_pred EEeccccceeeCCCCc-cc-HHHcCC-CCc-CCEEEEecCcccccCccceeEEEec-CHHHHHHHHHHHhhc--------
Confidence 99 666433211100 00 000000 111 25678888999998662 3677664 444443321110000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcC--hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEE-EEeeCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKG--TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNIS-FWYIPP 555 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G--~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~-F~~~p~ 555 (629)
+-....+..+.+.+.+. .+.+.+..++..++++++.+.|++.+|+++.. |..+.+. +++.+
T Consensus 268 -------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~--~~g~~~~~~~~~~- 331 (393)
T PRK05764 268 -------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPK--PEGAFYVFPNVSK- 331 (393)
T ss_pred -------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC--CCcceEEEEeccc-
Confidence 00112333344444442 34455566666778888999999988888653 5443332 23321
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..... . .-..++.+.+.+ .|..+........ .+++|+++++ ++++++..++.|.++.++
T Consensus 332 ~~~~~----~------~~~~~~~~~l~~~~gi~v~~g~~f~~-~~~vRis~~~---~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 332 LLGKS----I------TDSLEFAEALLEEAGVAVVPGIAFGA-PGYVRLSYAT---SLEDLEEGLERIERFLES 391 (393)
T ss_pred ccccc----c------CCHHHHHHHHHHhCCEEEccccccCC-CCEEEEEecC---CHHHHHHHHHHHHHHHHh
Confidence 11000 0 001245556654 5765443322222 4689999862 699999999999887653
No 123
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.44 E-value=1e-10 Score=126.43 Aligned_cols=297 Identities=10% Similarity=0.097 Sum_probs=175.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+++++++|.+..+.++++|+|+++..++.+... |...|++..-++.....++...|. ++
T Consensus 69 ~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~--------------~gd~vl~~~p~y~~~~~~~~~~g~---~~ 131 (380)
T PRK06225 69 PELRELILKDLGLDDDEALITAGATESLYLVMRAFLS--------------PGDNAVTPDPGYLIIDNFASRFGA---EV 131 (380)
T ss_pred HHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEcCCCCcchHHHHHHhCc---eE
Confidence 5567788999999888999999999998777665321 223355555666666778888898 89
Q ss_pred EEEecCC---CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCCeEEE--ecCccccc
Q psy1785 340 YLIKTDA---RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDMADSV--TWNPHKLL 411 (629)
Q Consensus 340 ~~V~~d~---~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~~lhV--A~gg~~l~ 411 (629)
+.++++. ++.+|+++|++.+.. .+.+|+.+...+.+|.+ +++.+|.++|+++|+++++ ++.....-
T Consensus 132 ~~v~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~ 205 (380)
T PRK06225 132 IEVPIYSEECNYKLTPELVKENMDE------NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFARE 205 (380)
T ss_pred EeeccccccCCccCCHHHHHhhcCC------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhcc
Confidence 9999743 358999999988753 23456666677788876 4589999999999999999 66432110
Q ss_pred cccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCC
Q psy1785 412 TAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 490 (629)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 490 (629)
.. .... +......+..++.|+++.| ..+|+++..+ ...+.... +.. . .+
T Consensus 206 ~~-----~~~~-----~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~-~l~~~~~~----~~~--~----------~~--- 255 (380)
T PRK06225 206 HT-----LAAE-----YAPEHTVTSYSFSKIFGMAGLRIGAVVATP-DLIEVVKS----IVI--N----------DL--- 255 (380)
T ss_pred CC-----chhh-----cCCCCEEEEeechhhcCCccceeEEEecCH-HHHHHHHH----HHh--c----------cc---
Confidence 00 0001 1111345666778999744 3378888754 44443211 000 0 00
Q ss_pred CCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 491 CGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 491 ~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
+........+...++. ..+-+++..+...++.+.+.+.|++++++.+...++..+.+.+.+.+....
T Consensus 256 ~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~------------ 322 (380)
T PRK06225 256 GTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAGID------------ 322 (380)
T ss_pred CCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEcccccCC------------
Confidence 1111111112222222 112223333334456777888888877764332123333333333221111
Q ss_pred hhHHHHHHHHHHhcCcEEEeeeec--CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 571 HKVAPKIKERMMKSGSMMITYQPI--HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 571 ~~~~~~i~~~l~~~G~~~i~~~~~--~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..++.+.|.++|..+...... ....+++|+++. . ++++++.+++.|+++.++
T Consensus 323 ---~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~-~--~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 323 ---PEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS-I--PREQVEVFCEEFPDVVET 376 (380)
T ss_pred ---HHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC-C--CHHHHHHHHHHHHHHHHH
Confidence 125677777888643321111 112358999985 2 689999999999887654
No 124
>KOG2040|consensus
Probab=99.43 E-value=3.4e-11 Score=129.44 Aligned_cols=340 Identities=20% Similarity=0.199 Sum_probs=216.0
Q ss_pred hcCCCcccc-ccChhHHHHHHHHHHHHHHHhCCCCCCeEEeC-CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEc
Q psy1785 241 ALNPSVYTY-EVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCP-GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTS 318 (629)
Q Consensus 241 ~~n~~~~~~-~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~-GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s 318 (629)
+.|..++.. +++++..++-.+...+++++.|++. ..|.+ +|..+-..++.+.|... +.+.+| .+-+++..
T Consensus 565 fanIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~D~--~s~QPNsGA~GEYaGL~~IRaY~--~~kge~----hRnvClIP 636 (1001)
T KOG2040|consen 565 FANIHPFAPVEQAQGYQQLFTELEKDLCEITGFDS--FSLQPNSGAQGEYAGLRVIRAYL--ESKGEG----HRNVCLIP 636 (1001)
T ss_pred hccCCCCCchHHHhhHHHHHHHHHHHhheeecccc--eeecCCCCcccchhhHHHHHHHH--HhccCC----cceeEEEe
Confidence 345555443 5678888888999999999999974 44554 33444455555555432 233344 35678888
Q ss_pred CCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHc
Q psy1785 319 EDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF-DPIPAIADICAEY 397 (629)
Q Consensus 319 ~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i-dpl~ei~~i~~~~ 397 (629)
-.+|-.....|++.|+ +|+.|.++.+|.+|..+|+++.++..+ .-..+.+|+.+|. |.+ ..|+++.++.+++
T Consensus 637 vSAHGTNPASA~Magm---kvvpV~~~~~G~id~~dLk~kaekh~~---~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh 709 (1001)
T KOG2040|consen 637 VSAHGTNPASAAMAGM---KVVPVGCDANGNIDMVDLKAKAEKHKD---NLAALMVTYPSTH-GVFEEGIDDICDIIHEH 709 (1001)
T ss_pred ecccCCChhhHHhcCC---EEEEeeccCCCCccHHHHHHHHHHhhh---hhheeEEeccccc-ccccccHHHHHHHHHhc
Confidence 9999999999999999 999999999999999999998877544 2345777887776 555 4689999999999
Q ss_pred CCeEEE---ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 398 DMADSV---TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 398 ~~~lhV---A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
|--+.+ -.++.+-++.| -+.|+|....|.||.+..|-|.|.--+..-..-+ .-++||..-
T Consensus 710 GGQVYlDGANMNAqVGlc~p-------------Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~----HLapfLP~H 772 (1001)
T KOG2040|consen 710 GGQVYLDGANMNAQVGLCRP-------------GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK----HLAPFLPSH 772 (1001)
T ss_pred CCEEEecCCCccceecccCC-------------ccccccceeecccceeeecCCCCCCCCCccchhh----hccccCCCC
Confidence 887766 23333333321 1337999999999999998876554433321111 124455432
Q ss_pred CcCCCcccCCCCccCC---CCCCc---chHH-HHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceE
Q psy1785 475 DKFYDTKYDSGDKHIQ---CGRKP---DVLK-FWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTN 547 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~---~sr~~---~al~-~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~ 547 (629)
..-... ..++...- .+.++ .+|+ -|.+++.+|..|++..-+-.+-+|+|+.++|+.. .+++. ....+.
T Consensus 773 pVvs~~--~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~-~~~~~~ 847 (1001)
T KOG2040|consen 773 PVVSPG--RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILF-RGENGL 847 (1001)
T ss_pred CccCCC--CCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeE-ecCCcc
Confidence 210000 00111100 11121 3344 4999999999999999999999999999999875 77776 333333
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
|.-.++- .+|... +.-+--+-.+.+||+.-|.--.+ -.|.- .+.|-+-.+ +.-+++++|+|++++-.+-+
T Consensus 848 vaHEFIl-D~r~fK------~~agieavDvAKRL~DYgFHaPT-mswPV-~gtLMIEPT-ESE~k~ElDRfcdAliSIre 917 (1001)
T KOG2040|consen 848 VAHEFIL-DLRPFK------KTAGIEAVDVAKRLMDYGFHAPT-MSWPV-AGTLMIEPT-ESEDKAELDRFCDALISIRE 917 (1001)
T ss_pred eeeeeee-echhhc------cccCCcHHHHHHHHHhccCCCCc-ccccc-CCceEeccC-ccccHHHHHHHHHHHHHHHH
Confidence 3322211 011100 00000013577899998842111 12221 246777776 77899999999998865543
No 125
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.43 E-value=3.2e-13 Score=139.51 Aligned_cols=244 Identities=22% Similarity=0.280 Sum_probs=156.6
Q ss_pred cccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 247 YTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 247 ~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
..|...|.+..+|+. +++++|.+. .+|+++||++|..++.+... |.-.|++...+|..+.
T Consensus 23 ~~Yg~D~~~~~l~~~----i~~l~g~e~--a~f~~sGT~An~~al~~~~~--------------~~~~vi~~~~aHi~~~ 82 (290)
T PF01212_consen 23 DAYGEDPTTARLEER----IAELFGKEA--ALFVPSGTMANQLALRAHLR--------------PGESVICADTAHIHFD 82 (290)
T ss_dssp CCTTSSHHHHHHHHH----HHHHHTSSE--EEEESSHHHHHHHHHHHHHH--------------TTEEEEEETTEHHHHS
T ss_pred cccCCChhHHHHHHH----HHHHcCCCE--EEEeCCCChHHHHHHHHHHh--------------cCCceeccccceeeee
Confidence 357778887665554 788999874 57999999999999988773 4556888999999887
Q ss_pred HHHH---HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcc--ccc---cCHHHHHHHHHHcC
Q psy1785 327 KLAA---FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVL--GAF---DPIPAIADICAEYD 398 (629)
Q Consensus 327 kaa~---~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~--G~i---dpl~ei~~i~~~~~ 398 (629)
+... +.|. +++.|+.+++|++|+++|++.+.........|-+|..+ -+|.. |.+ +.|++|.++|+++|
T Consensus 83 E~ga~~~~~G~---~~~~l~~~~~G~l~~~~l~~~~~~~~~h~~~~~~v~le-~t~~~~GG~~~s~~el~ai~~~a~~~g 158 (290)
T PF01212_consen 83 ETGAIEELSGA---KLIPLPSDDDGKLTPEDLEAAIEEHGAHHPQPAVVSLE-NTTELAGGTVYSLEELRAISELAREHG 158 (290)
T ss_dssp STTHHHHHTTC---EEEEEBECTGTBB-HHHHHHHHHHHTGTSGGEEEEEEE-SSBTTTTSB---HHHHHHHHHHHHHHT
T ss_pred ccchhhHhcCc---EEEECCCcccCCCCHHHHHHHhhhccccCCCccEEEEE-ecCcCCCCeeCCHHHHHHHHHHHHhCc
Confidence 7544 4677 89999987779999999999998865522244445554 45555 655 56777788899999
Q ss_pred CeEEE--e--cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 399 MADSV--T--WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 399 ~~lhV--A--~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
+.+|+ | |+...... |+ .+++ .. ++|++++++.|.+++|. |.+++-+++.+...+.. ..++.+.
T Consensus 159 l~lhmDGARl~~a~~~~~----~~----~~e~-~~-~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~-~k~~gg~ 225 (290)
T PF01212_consen 159 LPLHMDGARLANAAAALG----VS----LAEI-AA-GADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ-RKRLGGG 225 (290)
T ss_dssp -EEEEEETTHHHHHCHHH----HH----HHHH-HT-TSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH-HHHHTHH
T ss_pred eEEEEehhhHHHhhhccc----cc----HHHH-hh-hCCEEEEEEEccccccc--ceEEEechHHHHHHHHH-HHHhccC
Confidence 99999 3 44332211 11 1221 13 49999999999999985 45555555555543221 1111110
Q ss_pred CcCCCcccCCCCccCCCCCCcchHHH---HHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCce
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKPDVLKF---WFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECT 546 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~~al~~---w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~ 546 (629)
-|....+.. +..-...+.+.....+.+..++|++|.+.|+.. ++.+.. ++..+
T Consensus 226 -----------------~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~-~~~tn 281 (290)
T PF01212_consen 226 -----------------MRQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPR-PVETN 281 (290)
T ss_dssp -----------------HHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEET-TSS-H
T ss_pred -----------------eeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCc
Confidence 011112221 111112223333677889999999999999998 666655 44444
No 126
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=5.6e-11 Score=122.83 Aligned_cols=311 Identities=18% Similarity=0.195 Sum_probs=197.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEE---EcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLY---TSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~---~s~~~H~Si 325 (629)
|.....+..+|..+++...+|||.+-.+.-- .+|+.||+.+..+..+. | ..|+ .+.-.|-+-
T Consensus 64 YgGce~VD~vE~laierak~LFga~~anVQP-hSGs~AN~av~~All~p--------G------Dtimgm~l~~GGHltH 128 (413)
T COG0112 64 YGGCEYVDEVEELAIERAKKLFGAEYANVQP-HSGSQANQAVYLALLQP--------G------DTIMGLDLSHGGHLTH 128 (413)
T ss_pred cCCCeeHHHHHHHHHHHHHHHhCCCccccCC-CCchHHHHHHHHHHcCC--------C------CeEecccCCCCCcccC
Confidence 5566778899999999999999998544332 35788888776654432 1 1121 122223221
Q ss_pred HHHHHHcCCCCCCEEEEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-
Q psy1785 326 KKLAAFEGLGSDNVYLIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV- 403 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV- 403 (629)
-.-..+.|.- -+++..++| +++.+|.+++++.+.+. +|.+|+ +|.+.+--.-|++++++||++.|.++.+
T Consensus 129 g~~v~~sG~~-~~~v~Y~vd~et~~IDyD~~~k~a~e~-----kPK~ii--~G~SaY~r~id~~~~reIad~VGA~L~~D 200 (413)
T COG0112 129 GSPVNFSGKL-FNVVSYGVDPETGLIDYDEVEKLAKEV-----KPKLII--AGGSAYSRPIDFKRFREIADEVGAYLMVD 200 (413)
T ss_pred CCCCCcccee-EEeEecccccccCccCHHHHHHHHHHh-----CCCEEE--ECccccccccCHHHHHHHHHHhCceEEeh
Confidence 1111122210 167777888 56999999999988874 677665 4778888888999999999999999988
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|+=.+....- .+.+ .++. ||.++.+.||.|.+|.| |++++++.++.+...+. +|+
T Consensus 201 mAHiaGLVA~G--------~~p~-P~~~-AdvVTtTTHKTlrGPrG-G~Il~~~eel~kkin~a----VFP--------- 256 (413)
T COG0112 201 MAHVAGLIAGG--------VHPN-PLPH-ADVVTTTTHKTLRGPRG-GIILTNDEELAKKINSA----VFP--------- 256 (413)
T ss_pred HHHHHHHHhcc--------cCCC-CCCc-cceEeCCcccCCCCCCc-eEEEeccHHHHHHhhhh----cCC---------
Confidence 4322221111 1111 2677 99999999999999985 78888875555543221 221
Q ss_pred CCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCC
Q psy1785 483 DSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKE 561 (629)
Q Consensus 483 ~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~ 561 (629)
.+|++-.. ...+...+++....-+|++..++.+++|+.|++.|.+. |++++..--+...+...+.+.++.|.
T Consensus 257 -----g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~~~Gk- 329 (413)
T COG0112 257 -----GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKGLTGK- 329 (413)
T ss_pred -----ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCCCCHH-
Confidence 22344332 23344456666668899999999999999999999996 99999732344445554444444432
Q ss_pred chhhHHHHHhhHHHHHHHHHHhcCcEEEe-eeecCC----ccceEEEee---cCCCCCHHHHHHHHHHHHHHhh
Q psy1785 562 DQADFNELLHKVAPKIKERMMKSGSMMIT-YQPIHA----LPNFFRLVL---QNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 562 ~~~~~~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~~----~~~~lR~~~---~n~~~t~edid~l~~~i~~l~~ 627 (629)
.....|-+.|..+-- .-|++. .+.-||+.. +.-...++|+..+.+.|.++..
T Consensus 330 --------------~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 330 --------------KAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred --------------HHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 223344445533211 112221 123489876 3345678899999888877654
No 127
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.42 E-value=1.6e-11 Score=130.82 Aligned_cols=303 Identities=17% Similarity=0.170 Sum_probs=176.7
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCCC--Ce-EEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEE-E--cCCcch
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQGG--DG-IFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLY-T--SEDAHY 323 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~~--~g-~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~-~--s~~~H~ 323 (629)
........+|.-+++.+.+|||.+.. .. +-..+|+.||+.+..+-.. |...|+ . ..-.|.
T Consensus 59 ~G~~~id~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~--------------pGD~Im~l~l~~GGHl 124 (399)
T PF00464_consen 59 GGCEYIDEIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLK--------------PGDTIMGLSLPHGGHL 124 (399)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT---------------TT-EEEEEEGGGT--G
T ss_pred cCcchhhHHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHh--------------hcCcEEecChhhcccc
Confidence 34566788999999999999999842 12 2234778888766655443 222222 2 222355
Q ss_pred HHHHHHH-------HcCCCCCCEEEEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH
Q psy1785 324 SIKKLAA-------FEGLGSDNVYLIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA 395 (629)
Q Consensus 324 Si~kaa~-------~lGlg~~~v~~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~ 395 (629)
|-..... -..+ +++..++| +++.+|.+.+++.+.+. +|.+|++ |.+.+--.-|++++++||+
T Consensus 125 shg~~~~~~~~~~~~~~~---~~~~y~~d~~~~~ID~d~l~~~a~~~-----kPklIi~--G~S~y~~~~d~~~~reIad 194 (399)
T PF00464_consen 125 SHGSSVNFKKISASGLYF---ESVPYPVDPDTGLIDYDELEKLAKEH-----KPKLIIC--GASSYPRPIDFKRFREIAD 194 (399)
T ss_dssp GGT-TTSHSBSSHHHHHS---EEEEEEB-TTTSSB-HHHHHHHHHHH-------SEEEE--E-SSTSS---HHHHHHHHH
T ss_pred cccccccccccccccceE---EEEeeeeecCCCeECHHHHHHHHhhc-----CCCEEEE--CchhccCccCHHHHHHHHH
Confidence 4322211 1234 67788888 67999999999998874 4666644 5566667778999999999
Q ss_pred HcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEe-------------ccchh
Q psy1785 396 EYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTR-------------HQSVL 460 (629)
Q Consensus 396 ~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r-------------~~~~l 460 (629)
+.|..+++ ++-.+..... .+.+ .++. ||.++.+.||.|.+|. +|+++++ +.++.
T Consensus 195 ~vga~l~~D~sH~~GLIa~g--------~~~~-P~~~-ADvvt~sThKtl~GPr-ggiI~~~~~~~~~~~~~~~~~~~l~ 263 (399)
T PF00464_consen 195 EVGAYLMADISHIAGLIAGG--------LFPN-PFPY-ADVVTGSTHKTLRGPR-GGIILTNKGSKNVDKKGKEIDEELA 263 (399)
T ss_dssp HTT-EEEEE-TTTHHHHHTT--------SS---GCCT-SSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHHHH
T ss_pred hcCcEEEecccccccceehh--------eecC-cccc-ceEEEeeccccccccC-ceEEEEcCCccccCCcccccHHHHH
Confidence 99999988 4433332221 0111 1566 9999999999999997 4888888 22222
Q ss_pred hhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 461 TECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 461 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
+...+ -+++ +.|++-.. ...++..+++......+++..++.+++|+.|.+.|.+. ||+++
T Consensus 264 ~~I~~----avfP--------------~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~ 324 (399)
T PF00464_consen 264 EKIDS----AVFP--------------GLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVV 324 (399)
T ss_dssp HHHHH----HHTT--------------TT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEG
T ss_pred HHhcc----ccCC--------------CcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEE
Confidence 21100 0111 22344343 34555666776666778999999999999999999997 99998
Q ss_pred ccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCC-----ccceEEEeec---CCCCC
Q psy1785 540 LDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHA-----LPNFFRLVLQ---NSALD 611 (629)
Q Consensus 540 ~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~-----~~~~lR~~~~---n~~~t 611 (629)
..-.+...|.....+.++.+ .+..++|.+.|.+ +....+.+ .+..||+... .-...
T Consensus 325 ~ggTd~H~vlvd~~~~~~~g---------------~~a~~~Le~~gI~-vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~ 388 (399)
T PF00464_consen 325 TGGTDNHQVLVDLRSFGIDG---------------KEAEKALEEAGII-VNKNTIPGDRSPFVPSGLRLGTPALTRRGMK 388 (399)
T ss_dssp GGS-SSSEEEEEGGGGTS-H---------------HHHHHHHHHTTEE--EEE--TTTSTTTT-SEEEEESHHHHHTT--
T ss_pred ECCCCCCeEEEEecccccch---------------HHHHHHHHhcCee-ecccccCCCCCCCCCCEEEECCHHHHhCCCC
Confidence 64456666666654433221 2445677777854 33332221 1246999973 35568
Q ss_pred HHHHHHHHHHH
Q psy1785 612 HSDMDYFIDEI 622 (629)
Q Consensus 612 ~edid~l~~~i 622 (629)
++||..+.+.|
T Consensus 389 e~dm~~iA~~I 399 (399)
T PF00464_consen 389 EEDMKEIAELI 399 (399)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhhC
Confidence 88888887654
No 128
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.41 E-value=8.9e-11 Score=128.32 Aligned_cols=240 Identities=16% Similarity=0.146 Sum_probs=149.6
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH---
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL--- 328 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka--- 328 (629)
.|....+|+ .++++.|.+ .++++++|+.|+..++.+... |...|+++...|......
T Consensus 68 ~p~~~~Le~----~lA~l~g~~--~av~~sSG~aAi~~al~all~--------------~Gd~Vv~~~~~y~~t~~~~~~ 127 (436)
T PRK07812 68 NPTQDVVEQ----RIAALEGGV--AALLLASGQAAETFAILNLAG--------------AGDHIVSSPRLYGGTYNLFHY 127 (436)
T ss_pred CchHHHHHH----HHHHHhCCC--eEEEEccHHHHHHHHHHHHhC--------------CCCEEEEeCCcchHHHHHHHH
Confidence 465555554 478888865 478899999987777654321 334566667776665433
Q ss_pred -HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 329 -AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 329 -a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
+...|+ +++.++ +. .|+++++++|.+ .+.+|.....++.+|.+-|+++|+++|+++|++++| ++
T Consensus 128 ~l~~~Gi---~v~~vd-d~---~d~e~l~~ai~~------~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~ 194 (436)
T PRK07812 128 TLPKLGI---EVSFVE-DP---DDLDAWRAAVRP------NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTI 194 (436)
T ss_pred HhhcCeE---EEEEEC-CC---CCHHHHHHhCCC------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 333555 666664 22 388888877753 356788888999999999999999999999999999 56
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccch-hhhh-----hcCCCCccccCCcCC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSV-LTEC-----HSASASYLFQKDKFY 478 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~-l~~~-----~~~~~~yl~~~~~~~ 478 (629)
+......+ ++.|+|.++.++||+++++-+ .|.+++..... .... ...++.|........
T Consensus 195 a~~~~~~p--------------l~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (436)
T PRK07812 195 ATPYLIRP--------------LEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAEL 260 (436)
T ss_pred cccccCCc--------------hhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhc
Confidence 54332211 344799999999999987632 55555543211 0000 001112211000000
Q ss_pred Cc-cc--CCC-CccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 479 DT-KY--DSG-DKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 479 ~~-~~--~~~-~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.. .+ ... .+....|-.......|+.++ |.+-+..++++..++|..+.+.|+++|+++-+.
T Consensus 261 ~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~ 324 (436)
T PRK07812 261 GPPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASVN 324 (436)
T ss_pred chhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 00 00 000 00001233345667776554 778899999999999999999999999986543
No 129
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.41 E-value=3.6e-11 Score=136.13 Aligned_cols=306 Identities=13% Similarity=0.138 Sum_probs=191.2
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+. .-..+.|.|.+|..++.++.. |...|++...+|-|+..++.+.|+ ..
T Consensus 198 ~eAe~~AA~~fgAd~-tyfvvNGTS~~n~av~~a~~~--------------~Gd~VLvdRN~HKSv~haLilsga---~P 259 (714)
T PRK15400 198 KEAEEYIARVFNADR-SYMVTNGTSTANKIVGMYSAP--------------AGSTVLIDRNCHKSLTHLMMMSDV---TP 259 (714)
T ss_pred HHHHHHHHHHhCCCc-EEEEeCchHHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHcCC---eE
Confidence 566677999999874 334556666777766665432 456788999999999999999999 88
Q ss_pred EEEecCCC-----CCCC-----HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 340 YLIKTDAR-----GRML-----PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 340 ~~V~~d~~-----g~~d-----~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
++++..-+ |.++ ++.++++|++..+. ..|+.++.|.+ |..|.+-++++|+++|+.++ +|| |||+
T Consensus 260 VYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwga 335 (714)
T PRK15400 260 IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVP 335 (714)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchh
Confidence 88876432 3455 88898888764321 35667777764 88899999999999999887 688 9999
Q ss_pred ccccccccccccccccccc-ccCCcc---e--EEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcc
Q psy1785 408 HKLLTAPQQCSVFLTRRNY-VIEVVA---D--SVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK 481 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~-~i~~ga---D--sv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 481 (629)
|.-+.+. +++. ++..|+ | .++-|.||.|.+-.|++.+.++.. .-...+. ..|..
T Consensus 336 h~~F~p~--------~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n--~a~~m--------- 395 (714)
T PRK15400 336 YTNFSPI--------YEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFN--EAYMM--------- 395 (714)
T ss_pred hhccCcc--------cCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHH--HHHHH---------
Confidence 9887762 2211 343456 5 999999999999999999888653 1111111 01111
Q ss_pred cCCCCccCCCCCCc----chHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCC------cEEEccCCCce-EEE
Q psy1785 482 YDSGDKHIQCGRKP----DVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPG------FKLVLDEPECT-NIS 549 (629)
Q Consensus 482 ~~~~~~~~~~sr~~----~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g------~~l~~~~p~~~-~v~ 549 (629)
++.|.+. .++-.. -+.+ |..| ++++++.++++..+++.|.++++ |+++. +.... .-|
T Consensus 396 -------~~STSPsY~l~ASLD~a--~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~-~~~~~~~~~ 464 (714)
T PRK15400 396 -------HTTTSPHYGIVASTETA--AAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQ-PDHIDTTEC 464 (714)
T ss_pred -------HcCCCcHHHHHHHHHHH--HHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecC-hhhcccchh
Confidence 1112221 111111 1222 2233 56788899999999999999888 77764 21111 112
Q ss_pred EEeeCCC-------------------C----CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeec
Q psy1785 550 FWYIPPS-------------------L----RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQ 606 (629)
Q Consensus 550 F~~~p~~-------------------~----~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~ 606 (629)
|.+.|.. + .+...+.++. ...--...+.+.|.+.|.. +..+. .+.+-+.++
T Consensus 465 w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~-~~Gipg~~v~~~L~e~gI~-~E~~d----~~~iLfl~s 538 (714)
T PRK15400 465 WPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMS-DFGIPASIVAKYLDEHGIV-VEKTG----PYNLLFLFS 538 (714)
T ss_pred cccCccccccCcccccccccccCCceEEEEeCCCCCCcccc-ccCCCHHHHHHHHHHcCCE-EEecC----CCeEEEEeC
Confidence 2222210 0 0000000000 0000123466777777753 33222 245677775
Q ss_pred CCCCCHHHHHHHHHHHHHH
Q psy1785 607 NSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 607 n~~~t~edid~l~~~i~~l 625 (629)
+..|+++++.|+++|.++
T Consensus 539 -~g~t~~~~~~L~~aL~~f 556 (714)
T PRK15400 539 -IGIDKTKALSLLRALTDF 556 (714)
T ss_pred -CCCCHHHHHHHHHHHHHH
Confidence 999999999999999876
No 130
>PLN02452 phosphoserine transaminase
Probab=99.41 E-value=3e-11 Score=128.98 Aligned_cols=306 Identities=13% Similarity=0.128 Sum_probs=184.3
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeC-CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCP-GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK 327 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~-GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k 327 (629)
..++.+..+-.++.+.++++++.++ ...+|.. |||.+ +.|+..-.-. .| .+..++.++.--..+.+
T Consensus 45 HRs~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~-~ea~~~nl~~-------~~----~~~l~~~~G~fg~r~~~ 112 (365)
T PLN02452 45 HRGKEFLSIIQKAEADLRELLDIPDNYEVLFLQGGASTQ-FAAIPLNLCK-------PG----DKADFVVTGSWSKKAAK 112 (365)
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccHHH-HHHHHHhcCC-------CC----CeEEEEECCHHHHHHHH
Confidence 4588899999999999999999975 4566664 55554 4443332211 11 23333333333233666
Q ss_pred HHHHcCCCCCCEEEEecCCCC---CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccc-ccCHHHHHHHHHHcCCeEEE
Q psy1785 328 LAAFEGLGSDNVYLIKTDARG---RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGA-FDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g---~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~-idpl~ei~~i~~~~~~~lhV 403 (629)
.|+..|. ..+.....+.+ ..+++++ +. ....-+|..++..|.+|. +.|++++.+ +.+.|
T Consensus 113 ~a~~~g~---~~~~~~~~~~~~~~~~~~~~~----~~----~~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvV 175 (365)
T PLN02452 113 EAKKYCK---TNVIASGKDEKYTKIPSVSEW----EL----TPDAKFVHICANETIHGVEFKDYPDVGN------VPLVA 175 (365)
T ss_pred HHHHhCC---CcEEEecCCCCCCCCCChHHc----CC----CCCCcEEEECCCCCCCcEecCcccccCC------CeEEE
Confidence 6777775 33333222222 4565553 11 123557899999999999 699888753 56666
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
+.... ...|. +.. +.|+|. .++||.+| |.|.|++++|++ ++.+.....+.|+.-...
T Consensus 176 Da~Ss~--g~~pi------dv~----~~~v~~--~saqK~lG-P~Gl~~v~vr~~-~l~~~~~~~~~~~~~~~~------ 233 (365)
T PLN02452 176 DMSSNF--LSKPV------DVS----KYGVIY--AGAQKNVG-PSGVTIVIIRKD-LIGNARPITPGMLDYKIH------ 233 (365)
T ss_pred ECCccc--cCccc------CHH----HcCEEE--EecccccC-CCCeEEEEEcHH-HHhhcccCCCchhhHHHH------
Confidence 22221 11111 111 123544 69999996 999999999885 444332222333211100
Q ss_pred CCCCccCCCCCC-cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC---CCceEEEEEeeCCCC
Q psy1785 483 DSGDKHIQCGRK-PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE---PECTNISFWYIPPSL 557 (629)
Q Consensus 483 ~~~~~~~~~sr~-~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~---p~~~~v~F~~~p~~~ 557 (629)
....+.-.+-+ +..+.+-.+++.+-.+ |++++.++..+++++|++.|++.+||.....+ ....+|+|++...
T Consensus 234 -~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~-- 310 (365)
T PLN02452 234 -AENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS-- 310 (365)
T ss_pred -HhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc--
Confidence 00001111111 2456666777777665 89999999999999999999998888211101 2345889986421
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+ + ..++.+.+.++|.+.+.+ .+...+ +|+++. ...+.++|+.|++.+++..+
T Consensus 311 -------~----~---~~~f~~~~~~~g~~~~~G--~r~~gg-~R~s~y-na~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 311 -------E----L---EAEFVKEAAKAGMVQLKG--HRSVGG-MRASIY-NAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred -------h----h---HHHHHHHHHHCCCcccCC--ccccCc-eEEECc-CCCCHHHHHHHHHHHHHHHH
Confidence 0 1 246788899999653322 222223 999997 88899999999999998765
No 131
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.41 E-value=9.6e-11 Score=126.86 Aligned_cols=292 Identities=14% Similarity=0.180 Sum_probs=180.5
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IK 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~ 326 (629)
..|....+| +.++++.|.+ ..++++.|+.++..++. .. .|...|+++...|.+ +.
T Consensus 52 ~~p~~~~le----~~lA~l~g~~--~~v~~~sG~~ai~~~l~-~l--------------~~Gd~Vlv~~~~y~~~~~~~~ 110 (390)
T PRK08064 52 GNPTREALE----DIIAELEGGT--KGFAFASGMAAISTAFL-LL--------------SKGDHVLISEDVYGGTYRMIT 110 (390)
T ss_pred CChhHHHHH----HHHHHHhCCC--CeEEECCHHHHHHHHHH-Hh--------------CCCCEEEEccCccchHHHHHH
Confidence 346554444 4588888876 35666767766544432 11 123345666666653 23
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
+.+...|+ +++.|+.+ |+++|++++.+ .+.+|..+..++.+|.+.|+++|.++|+++|+++.| +
T Consensus 111 ~~~~~~G~---~v~~v~~~-----d~~~l~~~l~~------~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a 176 (390)
T PRK08064 111 EVLSRFGI---EHTFVDMT-----NLEEVAQNIKP------NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNT 176 (390)
T ss_pred HHHHHcCC---EEEEECCC-----CHHHHHHhcCC------CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECC
Confidence 45566788 88888863 67888777753 355788889999999999999999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|+......+ ++.|+|.++.++||++++|.+ .|+++++++++...... +..
T Consensus 177 ~~~~~~~~~--------------~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~-----~~~--------- 228 (390)
T PRK08064 177 FLTPLLQKP--------------LDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYF-----LQN--------- 228 (390)
T ss_pred CCcccccCc--------------hhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHH-----HHH---------
Confidence 654332111 234799999999999998876 58888877554443211 100
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcE-EEcc----CC-----------Cce
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFK-LVLD----EP-----------ECT 546 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~-l~~~----~p-----------~~~ 546 (629)
..+....+...|..+ .|..-+..++++..+.+..+.+.|+++|.+. +..+ .| ..+
T Consensus 229 -------~~g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg 299 (390)
T PRK08064 229 -------SFGAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGA 299 (390)
T ss_pred -------hcCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcce
Confidence 011122445666654 4556677899999999999999999988763 2221 01 235
Q ss_pred EEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcE--EEe------ee--ec-----CCc-cceEEEeecCCCC
Q psy1785 547 NISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSM--MIT------YQ--PI-----HAL-PNFFRLVLQNSAL 610 (629)
Q Consensus 547 ~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~--~i~------~~--~~-----~~~-~~~lR~~~~n~~~ 610 (629)
+|+|.+.. . .+....++.+ .+......-|.. .+. .. +. .|. .+.+|+|+. ...
T Consensus 300 ~~sf~~~~-----~---~~~~~f~~~l--~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvG-le~ 368 (390)
T PRK08064 300 VLSFTLQS-----E---EAVRQFVSHV--KLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVG-LEN 368 (390)
T ss_pred EEEEEECC-----H---HHHHHHHHhC--CcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEec-cCC
Confidence 78887631 1 0111111110 000001111200 010 00 00 111 358999997 888
Q ss_pred CHHHHHHHHHHHHHH
Q psy1785 611 DHSDMDYFIDEIERL 625 (629)
Q Consensus 611 t~edid~l~~~i~~l 625 (629)
+++.|+.|.++|+++
T Consensus 369 ~~dli~dl~~Al~~~ 383 (390)
T PRK08064 369 VDDLIADFEQALSYV 383 (390)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999875
No 132
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.41 E-value=1.1e-10 Score=125.61 Aligned_cols=218 Identities=14% Similarity=0.130 Sum_probs=154.9
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA 329 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa 329 (629)
...|....+|+. +++|-|- ..+.++++|+.|+..++..... |...|+++...|....+.+
T Consensus 59 ~~nPt~~~le~~----la~LEg~--~~a~~~~SGmaAi~~~~~~ll~--------------~GD~Vv~~~~~Yg~t~~l~ 118 (395)
T PRK08114 59 RGTLTHFSLQEA----MCELEGG--AGCALYPCGAAAVANAILAFVE--------------QGDHVLMTGTAYEPTQDFC 118 (395)
T ss_pred CCChhHHHHHHH----HHHHhCC--CeEEEEhHHHHHHHHHHHHHcC--------------CCCEEEEeCCCcHHHHHHH
Confidence 346777777666 6666553 3577888888887766654321 3445777788887666544
Q ss_pred ----HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcC--CeEEE
Q psy1785 330 ----AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYD--MADSV 403 (629)
Q Consensus 330 ----~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~--~~lhV 403 (629)
...|+ ++..++. .|++.++++|++ .+.+|.+...++.+|.+-||++|+++||+++ +.+.|
T Consensus 119 ~~~l~~~Gi---~v~~vd~-----~d~~~l~~~l~~------~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvV 184 (395)
T PRK08114 119 SKILSKLGV---TTTWFDP-----LIGADIAKLIQP------NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMI 184 (395)
T ss_pred HHHHHhcCc---EEEEECC-----CCHHHHHHhcCC------CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEE
Confidence 45677 8888773 467888888754 3568899999999999999999999999985 99999
Q ss_pred --ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC--ccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 404 --TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ--QCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 404 --A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~--~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
+|+.... ..| ++.|||.++.+.|||+++|- .+|+++.++ +........ .+
T Consensus 185 DnT~a~p~~-~~p-------------l~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~-~~~~~l~~~--~~--------- 238 (395)
T PRK08114 185 DNTWAAGVL-FKA-------------LDFGIDISIQAGTKYLVGHSDAMIGTAVANA-RCWEQLREN--SY--------- 238 (395)
T ss_pred ECCCccccc-cCH-------------HHcCCcEEEEcCcccccCCCcceeEEEEcCH-HHHHHHHHH--HH---------
Confidence 6766544 331 34589999999999999995 677665443 332221100 00
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
..|.-......|+.++ |.+-+.-++++..++|..+.+.|+++|.++-+
T Consensus 239 ----------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V 286 (395)
T PRK08114 239 ----------LMGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARV 286 (395)
T ss_pred ----------hccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 1222346778887665 66778889999999999999999999988644
No 133
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.40 E-value=8.8e-11 Score=132.99 Aligned_cols=307 Identities=16% Similarity=0.181 Sum_probs=188.5
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+. .-.++.|.|.+|..++.++.. |...|++...+|-|+..++.+.|+ ..
T Consensus 198 ~eAe~~aA~~fgAd~-tyfvvNGTS~~n~av~~a~~~--------------~Gd~VLvdRN~HKSv~~aLilsga---~P 259 (713)
T PRK15399 198 LEAEEYIARTFGAEQ-SYIVTNGTSTSNKIVGMYAAP--------------AGSTLLIDRNCHKSLAHLLMMSDV---VP 259 (713)
T ss_pred HHHHHHHHHHhCCCc-EEEEeCChHHHHHHHHHHhcC--------------CCCEEEeecccHHHHHHHHHHcCC---ee
Confidence 556677999999864 344566667777776665532 456788999999999999999999 88
Q ss_pred EEEecCC--C---CCCCH-----HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeE-EE--ecC
Q psy1785 340 YLIKTDA--R---GRMLP-----ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMAD-SV--TWN 406 (629)
Q Consensus 340 ~~V~~d~--~---g~~d~-----~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~l-hV--A~g 406 (629)
++++... . |.+++ +.++++|++..+. ..|..++.|.+ |..|.+-++++|+++| |+.+ || |||
T Consensus 260 VYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhg 334 (713)
T PRK15399 260 IWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWV 334 (713)
T ss_pred EEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccch
Confidence 8887543 2 35666 8888888764321 35677777764 8889999999999998 6665 78 999
Q ss_pred cccccccccc-ccccccccccccCCcceEE---EeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 407 PHKLLTAPQQ-CSVFLTRRNYVIEVVADSV---TWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 407 g~~l~~~~~~-~~~~l~~~~~~i~~gaDsv---~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
+|..+.+.+. ++.. ....|+|.+ +-|.||.|.+-.|++.+.+|.. .-...+. ..|..
T Consensus 335 ah~~F~p~~~~~sam------~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~~~n--~a~~m---------- 395 (713)
T PRK15399 335 PYTHFHPIYQGKSGM------SGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEETFN--EAFMM---------- 395 (713)
T ss_pred hhhhcCcccCCcChh------hCCCCCCeeeeeeeehhccccccchheeeeecCC-CCHHHHH--HHHHH----------
Confidence 9987766221 2211 011147877 9999999999999999999763 1111111 01111
Q ss_pred CCCCccCCCCCCc----chHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCC------cEEEccCCCceEE-EE
Q psy1785 483 DSGDKHIQCGRKP----DVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPG------FKLVLDEPECTNI-SF 550 (629)
Q Consensus 483 ~~~~~~~~~sr~~----~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g------~~l~~~~p~~~~v-~F 550 (629)
++.|.+. .++-... +.+ |..| ++++++.++++..+++.|.++.+ |+++. +...... |+
T Consensus 396 ------~~STSPsY~LmASLD~a~--~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~-~~~~~~~~~w 465 (713)
T PRK15399 396 ------HTSTSPSYPIVASVETAA--AMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQ-PENVDEAECW 465 (713)
T ss_pred ------HcCCCcHHHHHHHHHHHH--HHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecC-ccccCCccce
Confidence 1112221 1121111 122 2234 56788889999999999988776 66664 2111111 22
Q ss_pred EeeCCC----C-------------------CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecC
Q psy1785 551 WYIPPS----L-------------------RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQN 607 (629)
Q Consensus 551 ~~~p~~----~-------------------~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n 607 (629)
.+.|.. . .|.....++. ...--...+.+.|.+.|.. +..+. .+.+-+.++
T Consensus 466 ~l~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~-~~Gi~g~~l~~~L~e~gI~-~E~~d----~~~vL~l~s- 538 (713)
T PRK15399 466 PVAPGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMS-EEGIPAALVAKFLDERGIV-VEKTG----PYNLLFLFS- 538 (713)
T ss_pred ecCCCcccccccccccccccCCCceEEEEecCcccccccc-cCCCCHHHHHHHHHHcCCE-EEecC----CCeEEEEeC-
Confidence 222210 0 0000000000 0000123566778778753 33222 235666775
Q ss_pred CCCCHHHHHHHHHHHHHH
Q psy1785 608 SALDHSDMDYFIDEIERL 625 (629)
Q Consensus 608 ~~~t~edid~l~~~i~~l 625 (629)
+..|+++++.|+++|.++
T Consensus 539 ~g~t~~~~~~L~~aL~~f 556 (713)
T PRK15399 539 IGIDKTKAMGLLRGLTEF 556 (713)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 999999999999999876
No 134
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.40 E-value=1.1e-10 Score=127.74 Aligned_cols=239 Identities=18% Similarity=0.175 Sum_probs=153.6
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IK 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~ 326 (629)
..|....+|+. ++++.|. ...+++++|+.++..++..... |...|+++...|.. +.
T Consensus 62 ~~p~~~~Le~~----lA~leg~--~~al~~~sG~~Ai~~al~~ll~--------------~GD~Vlv~~~~y~~t~~~~~ 121 (431)
T PRK08248 62 MNPTTDVFEKR----IAALEGG--IGALAVSSGQAAITYSILNIAS--------------AGDEIVSSSSLYGGTYNLFA 121 (431)
T ss_pred CCchHHHHHHH----HHHHhCC--CcEEEECCHHHHHHHHHHHHhC--------------CCCEEEEccCchhhHHHHHH
Confidence 45666555554 7888874 4789999999888777654321 33356666666543 33
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
..+...|+ +++.|+. .|+++|+++|.+ .+.+|.....++.+|.+-|+++|+++|+++|++++| +
T Consensus 122 ~~~~~~Gv---~v~~vd~-----~d~e~l~~ai~~------~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t 187 (431)
T PRK08248 122 HTLPKLGI---TVKFVDP-----SDPENFEAAITD------KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNT 187 (431)
T ss_pred HHHHhCCE---EEEEECC-----CCHHHHHHhcCC------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCC
Confidence 45667787 8888875 388888888753 245677778889999999999999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchhhhhhcCCCCccccCCcCCCcc-c
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVLTECHSASASYLFQKDKFYDTK-Y 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~-~ 482 (629)
++......+ ++.|+|.++.+.||+++.|-. .|.+++......-.. ......+...+..+... +
T Consensus 188 ~a~~~~~~p--------------l~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 252 (431)
T PRK08248 188 FASPYLLRP--------------IEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKG-SGKFPGLTEPDPSYHGLVY 252 (431)
T ss_pred CCccccCCh--------------hHcCCCEEEEcCccccCCCCCceEEEEEeCCcccccc-ccccccccCCccccccchh
Confidence 653222111 244799999999999998853 666666543211000 00000011110000000 0
Q ss_pred -C-CC----------CccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 483 -D-SG----------DKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 483 -~-~~----------~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
+ .+ ......|.......+|+.++ |.+-+..++++..++|.++++.|+++|+++-+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~ 320 (431)
T PRK08248 253 TDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWVS 320 (431)
T ss_pred hhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEE
Confidence 0 00 00011233446677776655 667788899999999999999999999986543
No 135
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.40 E-value=2.3e-10 Score=123.39 Aligned_cols=216 Identities=15% Similarity=0.153 Sum_probs=147.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH---
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL--- 328 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka--- 328 (629)
.|....+|+ .++++.|. .+..+++||+.|+..++.+... |...|+++...+......
T Consensus 60 npt~~~Le~----~iA~le~~--~~~~~~~sG~~Ai~~~l~all~--------------~GD~Vvv~~~~Y~~t~~l~~~ 119 (394)
T PRK09028 60 TPTHFAFQA----AIVELEGG--AGTALYPSGAAAISNALLSFLK--------------AGDHLLMVDSCYEPTRDLCDK 119 (394)
T ss_pred CchHHHHHH----HHHHHhCC--CcEEEECCHHHHHHHHHHHHhC--------------CCCEEEEECCCcHHHHHHHHH
Confidence 565555554 46666554 3678999999988776654321 334556666666555442
Q ss_pred -HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 329 -AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 329 -a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
....|+ ++..++.+ |.+.|++++.+ .+.+|.....++.+|.+.||++|+++|+++|+++.| +|
T Consensus 120 ~l~~~Gi---~v~~v~~~-----~~e~l~~~l~~------~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~ 185 (394)
T PRK09028 120 ILKGFGI---ETTYYDPM-----IGEGIRELIRP------NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTW 185 (394)
T ss_pred hhhhcce---EEEEECCC-----CHHHHHHhcCc------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCc
Confidence 334566 66666532 45667666643 366888899999999999999999999999999999 77
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+......+ ++.|||.++.+.|||++++-. .|++ +.++.......... .
T Consensus 186 a~p~~~~P--------------l~~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~l~~~~-~-------------- 235 (394)
T PRK09028 186 ASPINSRP--------------FEMGVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQLREHS-Y-------------- 235 (394)
T ss_pred cccccCCc--------------cccCceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHHHHHHH-H--------------
Confidence 76543222 355899999999999998843 4443 55544333211000 0
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
.+|.-......|+.++ |..-+.-+++++.++|..+.+.|+++|.++-+
T Consensus 236 ------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V 283 (394)
T PRK09028 236 ------LMGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHV 283 (394)
T ss_pred ------hcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 0222346677887765 66778899999999999999999999987544
No 136
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.40 E-value=5.7e-11 Score=128.11 Aligned_cols=210 Identities=16% Similarity=0.163 Sum_probs=144.5
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH----HHHHcCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK----LAAFEGLG 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k----aa~~lGlg 335 (629)
.++.+.+++++|.+ ..+++++|+.++..++ ... .|...|+++...|.+... .+...|+
T Consensus 50 ~~le~~la~l~g~~--~~l~~~sG~~al~~~l-~ll--------------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~- 111 (378)
T TIGR01329 50 TALESLLAKLDKAD--RAFAFSSGMAALDVIT-RLL--------------NNGDEIIAGDDLYGGTDRLLTQVVPRSGV- 111 (378)
T ss_pred HHHHHHHHHHhCCC--cEEEECCHHHHHHHHH-HHh--------------CCCCEEEEcCCCchHHHHHHHHHHHHcCc-
Confidence 44455688888873 5677777776543322 211 134456777777776544 3455787
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
+++.++.+ |+++++++|.. .+.+|.....++.+|.+-|+++|+++|+++|+++.| +++......+
T Consensus 112 --~v~~vd~~-----d~~~le~~i~~------~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~~~~~~~ 178 (378)
T TIGR01329 112 --VVVHVDTT-----DLDKVKAALGP------KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMSPLLCNP 178 (378)
T ss_pred --EEEEeCCC-----CHHHHHHhcCc------CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCCh
Confidence 88888763 78888888753 356788888999999999999999999999999999 6644322111
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCC
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 491 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 491 (629)
++.|+|.++.++||++++|.+ .|+++++++.+..+... +.. ..
T Consensus 179 --------------l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~-----~~~----------------~~ 223 (378)
T TIGR01329 179 --------------LELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF-----LQN----------------ST 223 (378)
T ss_pred --------------hhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH-----HHH----------------hc
Confidence 233699999999999999876 88888877554333211 100 01
Q ss_pred CCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcE
Q psy1785 492 GRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFK 537 (629)
Q Consensus 492 sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~ 537 (629)
+........|+.++ |.+-+..++++..+++..+.+.|+++|.++
T Consensus 224 G~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 224 GSGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred CCcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 11123344555443 567888899999999999999999988763
No 137
>PRK05968 hypothetical protein; Provisional
Probab=99.40 E-value=2e-10 Score=124.44 Aligned_cols=229 Identities=15% Similarity=0.211 Sum_probs=153.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKK 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~k 327 (629)
.|....+| +.+++++|.+ ..+++++|+.++..++.+.. .|...|+++...|.+ +.+
T Consensus 62 ~p~~~~le----~~lA~l~g~~--~av~~~sG~~Ai~~al~al~--------------~~Gd~Vl~~~~~y~~t~~~~~~ 121 (389)
T PRK05968 62 NPTVRAFE----EMLAKLEGAE--DARGFASGMAAISSTVLSFV--------------EPGDRIVAVRHVYPDAFRLFET 121 (389)
T ss_pred ChhHHHHH----HHHHHHhCCC--cEEEECCHHHHHHHHHHHHh--------------CCCCEEEEeCCCchHHHHHHHH
Confidence 45554444 4588888875 45777888887766654321 133446666667665 335
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++.+ |+++|++++. .+.+|.....++..+.+.|+++|+++|+++|+.++| +|
T Consensus 122 ~~~~~G~---~v~~vd~~-----d~~~l~~~i~-------~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~ 186 (389)
T PRK05968 122 ILKRMGV---EVDYVDGR-----DEEAVAKALP-------GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSW 186 (389)
T ss_pred HHHHcCc---eEEEeCCC-----CHHHHHHhcc-------cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCC
Confidence 6667788 88888643 8888887762 133566677888889999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+.... .. .+..|+|.++.++||++++|.+ .|+++ .+++.+.+.......++
T Consensus 187 a~~~~-~~-------------p~~~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~------------ 239 (389)
T PRK05968 187 ASPVF-QR-------------PITLGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYL------------ 239 (389)
T ss_pred cchhc-cC-------------chhcCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhC------------
Confidence 54322 11 1234699999999999998854 45554 44444443321111111
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC------------ceEEEEE
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE------------CTNISFW 551 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~------------~~~v~F~ 551 (629)
+ -....+..|..++ +.+.+..++++..++++++.+.|+++|+++.+. .|. .++++|.
T Consensus 240 -g-------~~~~~~~A~~~l~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~-~p~l~~~~~~~~~g~g~~~sf~ 308 (389)
T PRK05968 240 -G-------AKLSPFEAWLLLR--GLRTLPLRMKAHEASALEIARRLKAHPVVERVC-HPALANHPPAGLSGTSGLFSFI 308 (389)
T ss_pred -C-------CCCChHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE-CCCCCCChHHhCCCCceEEEEE
Confidence 0 0122456666544 456778899999999999999999999997665 331 3588898
Q ss_pred ee
Q psy1785 552 YI 553 (629)
Q Consensus 552 ~~ 553 (629)
+.
T Consensus 309 ~~ 310 (389)
T PRK05968 309 FR 310 (389)
T ss_pred EC
Confidence 74
No 138
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.39 E-value=6.7e-11 Score=118.75 Aligned_cols=309 Identities=16% Similarity=0.189 Sum_probs=210.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcc----hHHHHHHHHc
Q psy1785 257 LMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAH----YSIKKLAAFE 332 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H----~Si~kaa~~l 332 (629)
.+-..+..+++.|+|...++.+++.+.|.-.+..+.++.+.. ..+.||+.-+..- |-....++++
T Consensus 76 ~lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~-----------~~r~vIv~E~~~fpTdly~a~g~~~~~ 144 (407)
T COG3844 76 DLPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQ-----------EGRRVIVSEGDNFPTDLYIAEGLADLL 144 (407)
T ss_pred hchhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccC-----------CCceEEeecCCCCCcchhhhcchhhhh
Confidence 344667889999999998888887776665566666665431 1233343333332 2344456777
Q ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccc
Q psy1785 333 GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKL 410 (629)
Q Consensus 333 Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l 410 (629)
|+| .+-.+.+.|.++++++.++ .-.|..+....-+|..-++.+|..++|++|+...- |+..+..
T Consensus 145 ~~~--------~~~~~~~~P~~~~~~~~dd------~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGav 210 (407)
T COG3844 145 GIG--------YDLEGVIAPRALEEAITDD------VAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAV 210 (407)
T ss_pred ccc--------ccceeeeChHHHHHhhccc------eEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCc
Confidence 764 2334567788999999885 34788888999999999999999999999965444 6666655
Q ss_pred ccccccccccccccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCCCCccccCCcCCCc-c--cCCCC
Q psy1785 411 LTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDT-K--YDSGD 486 (629)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~-~--~~~~~ 486 (629)
..+ -+. .|+|.-+++.||+|.+ |-+.+++++.++ ..+...+....+..+.+.+.-. . ...|-
T Consensus 211 p~~--------Lh~-----~gaDfaigcsyKYLNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga 276 (407)
T COG3844 211 PVD--------LHA-----AGADFAIGCSYKYLNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGPGA 276 (407)
T ss_pred cee--------ecc-----cCCCeeeeeeceeccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCccc
Confidence 433 121 2699999999999954 666777777553 3444334444555544332211 1 12333
Q ss_pred ccCCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC---CcEEEcc---CCCceEEEEEeeCCCCC
Q psy1785 487 KHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP---GFKLVLD---EPECTNISFWYIPPSLR 558 (629)
Q Consensus 487 ~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~---g~~l~~~---~p~~~~v~F~~~p~~~~ 558 (629)
..++||.+. ....+--+|..++..++.+.-++.+.|+.||.+.++..- +++++.+ +..-+.|+|..+ .
T Consensus 277 ~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp-~--- 352 (407)
T COG3844 277 RRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP-H--- 352 (407)
T ss_pred cceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC-c---
Confidence 455677664 445556677778888899999999999999999998753 5787762 234567888642 1
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+++.+.|.++|.+ + ..+ .++.+|+.++-.+++.+||-..++.|+++.+.
T Consensus 353 ---------------~~~V~qaLi~rGVi--g--D~R-~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t 402 (407)
T COG3844 353 ---------------GYQVMQALIDRGVI--G--DFR-EPDVLRFGFTPLYVSFVDVWDAVDALEEVLDT 402 (407)
T ss_pred ---------------HHHHHHHHHHcCcc--c--ccc-CCCeeeecCccceechhHHHHHHHHHHHHHHh
Confidence 25788999999964 2 122 35799999986689999999999999887654
No 139
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.39 E-value=1.7e-10 Score=124.52 Aligned_cols=212 Identities=17% Similarity=0.231 Sum_probs=143.9
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHHHHHHcCCCC
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKKLAAFEGLGS 336 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~kaa~~lGlg~ 336 (629)
+..+.+++++|.+ ..+++++|+.++..++.+... |...|+++...|.+ +.+.+...|+
T Consensus 58 ~le~~la~l~g~~--~~~~~~sG~~Ai~~al~al~~--------------~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~-- 119 (380)
T TIGR01325 58 AFEERIAALEGAE--RAVATATGMSAIQAALMTLLQ--------------AGDHVVASRSLFGSTVGFISEILPRFGI-- 119 (380)
T ss_pred HHHHHHHHHhCCC--cEEEECCHHHHHHHHHHHHhC--------------CCCEEEEecCCcchHHHHHHHHHHHhCC--
Confidence 3345578888874 578899999988877754321 22235555566643 3345666788
Q ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 337 DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 337 ~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+++.++.+ |+++|++++.+ .+.+|.....++.+|.+.|+++|.++|+++|++++| +|...... .
T Consensus 120 -~v~~v~~~-----d~~~l~~~i~~------~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~~~~~-~- 185 (380)
T TIGR01325 120 -EVSFVDPT-----DLNAWEAAVKP------NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFATPVLQ-Q- 185 (380)
T ss_pred -EEEEECCC-----CHHHHHHhcCC------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcccccC-C-
Confidence 88888764 68888777643 355777778888999999999999999999999999 76543221 1
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
.++.|+|.++.++||+++++.. .|.+++.+++..+.... +.. ..+.
T Consensus 186 ------------pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~----~~~-----------------~~g~ 232 (380)
T TIGR01325 186 ------------PLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAV----YLR-----------------HTGP 232 (380)
T ss_pred ------------chhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHH----HHH-----------------hhCC
Confidence 1234699999999999987742 33344444344433211 110 0122
Q ss_pred CcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 494 KPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 494 ~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
......+|.+++ |.+-+..++++..+++.++.+.|+++|+++-+
T Consensus 233 ~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V 276 (380)
T TIGR01325 233 AMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAV 276 (380)
T ss_pred CCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 234455676665 56778888999999999999999999987644
No 140
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.38 E-value=4.8e-10 Score=122.30 Aligned_cols=312 Identities=14% Similarity=0.107 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL- 334 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl- 334 (629)
.....++.+.+++++|.+.....+++|||+++..++..++... ....+++.....|.+...+....+-
T Consensus 78 ~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~~al~~~~~~~-----------~~~~ii~~~~~yhg~~~~~~~~~~~~ 146 (413)
T cd00610 78 NEPAVELAELLLALTPEGLDKVFFVNSGTEAVEAALKLARAYT-----------GRKKIISFEGAYHGRTLGALSLTGSK 146 (413)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHc-----------CCCeEEEECCCcCCccHHHHHhcCCc
Confidence 4456777778999988655689999999999999999887531 1244666777788876655544321
Q ss_pred --------CCCCEEEEecCCC------CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q psy1785 335 --------GSDNVYLIKTDAR------GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAE 396 (629)
Q Consensus 335 --------g~~~v~~V~~d~~------g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~ 396 (629)
-..+++.+|.++. ...|++.|++.+... +..+.+|+.....+..|.+.| +++|+++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~ 223 (413)
T cd00610 147 KYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRK 223 (413)
T ss_pred cccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 0125677777632 334888888877541 224556666666777788877 9999999999
Q ss_pred cCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 397 YDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 397 ~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
|++++++ ++.+.........+ .. .++ . .|.++++ |+++.++.+|.++.++ ++.... . ...+..
T Consensus 224 ~~~~li~Dev~~g~g~~g~~~~~----~~--~~~-~-~d~~t~s--K~l~~g~~~g~~~~~~-~~~~~~-~-~~~~~~-- 288 (413)
T cd00610 224 HGILLIADEVQTGFGRTGKMFAF----EH--FGV-E-PDIVTLG--KGLGGGLPLGAVLGRE-EIMDAF-P-AGPGLH-- 288 (413)
T ss_pred cCCEEEEeccccCCCcCcchhhH----hh--cCC-C-CCeEEEc--ccccCccccEEEEEcH-HHHHhh-c-cCCCCC--
Confidence 9999999 66653111110000 11 122 2 5777665 9999878889887754 344321 0 000000
Q ss_pred CcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCC-cEEEcc-CCCceEEEEEe
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPG-FKLVLD-EPECTNISFWY 552 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g-~~l~~~-~p~~~~v~F~~ 552 (629)
... .++.......+..+++.+..+ ++.++..++.+++++.|++... ..++.. .+...++++.+
T Consensus 289 ---------~~t---~~~~~~~~~a~~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~ 353 (413)
T cd00610 289 ---------GGT---FGGNPLACAAALAVLEVLEEE---GLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIEL 353 (413)
T ss_pred ---------CCC---CCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEE
Confidence 000 122223344555556655443 4556677788888888876521 112210 23445566665
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.+....... + . .....+.+.|.++|..+ ... . .+.+|++++ ..+|++||+.+++.|+++
T Consensus 354 ~~~~~~~~~---~--~---~~~~~~~~~l~~~gv~v-~~~--~--~~~lR~~~~-~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 354 VKDRATKPP---D--K---ELAAKIIKAALERGLLL-RPS--G--GNVIRLLPP-LIITEEEIDEGLDALDEA 412 (413)
T ss_pred ecCCCcCCc---c--h---HHHHHHHHHHHHCCeEE-eec--C--CCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 432110000 0 0 11246778888998643 321 1 358999995 889999999999999875
No 141
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.38 E-value=2e-10 Score=124.66 Aligned_cols=218 Identities=16% Similarity=0.177 Sum_probs=146.8
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH----H
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK----K 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~----k 327 (629)
.|....+| +.+++++|.+. ...+++|+.++..++.+.. .|...|+++...+.+.. .
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~--~~~~~sG~~Ai~~~l~~~l--------------~~Gd~Vl~~~~~y~~~~~~~~~ 123 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAED--ARATASGMAAVTAAILCQV--------------KAGDHVVAARALFGSCRYVVET 123 (398)
T ss_pred CchHHHHH----HHHHHHhCCCe--eeEecCHHHHHHHHHHHHh--------------CCCCEEEEcCCchhHHHHHHHH
Confidence 45554444 55888898864 4567788888765554321 13345666666655432 3
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++ .+|+++++++|.+ .+.+|.....++.+|.+-|+++|.++|+++|++++| +|
T Consensus 124 ~~~~~G~---~v~~vd-----~~d~e~l~~ai~~------~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~ 189 (398)
T PRK07504 124 LLPRYGI---ESTLVD-----GLDLDNWEKAVRP------NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVF 189 (398)
T ss_pred HHhhcCe---EEEEEC-----CCCHHHHHHhcCc------CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCc
Confidence 3445576 777774 3789999888753 356788888999999999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
.......+ ++.|+|.++.++||+++++- ..|.+++.++..+...+. .++.
T Consensus 190 a~~~~~~~--------------~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~------------ 240 (398)
T PRK07504 190 ATPLFQKP--------------LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR------------ 240 (398)
T ss_pred cccccCCc--------------hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH------------
Confidence 54332211 23369999999999998763 244444444444432111 1111
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
.++.....+.+|..++ |.+-+..++++..+++.++.+.|++.|+++-+
T Consensus 241 -----~~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v 288 (398)
T PRK07504 241 -----HTGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVARV 288 (398)
T ss_pred -----HhCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 1223345677777776 45668889999999999999999999987533
No 142
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.38 E-value=1.4e-10 Score=124.74 Aligned_cols=354 Identities=15% Similarity=0.168 Sum_probs=197.0
Q ss_pred CccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHh
Q psy1785 218 PYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHH 297 (629)
Q Consensus 218 p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~ 297 (629)
--|......+++.+-..++|......- ..|..+|.+..+|+. +++++|++ ..+++++||.|...+. +.
T Consensus 38 ~v~iDLltDsgT~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~----va~~~G~~--~av~v~sGT~Al~ll~--~l-- 105 (450)
T TIGR02618 38 DVYIDLLTDSGTNAMSDKQWAGLMMGD--EAYAGSRNFYHLERT----VRELYGFK--YVVPTHQGRGAENLLS--QI-- 105 (450)
T ss_pred ceEEEcccCCCcHHHHHHHHHHhhhcc--hhhcCCCcHHHHHHH----HHHHHCCC--eEEEcCCHHHHHHHHH--Hh--
Confidence 346666666666322223355555432 247778988888776 66788886 5899999999944321 11
Q ss_pred hchhHHhcCCCCCCCeEEEEcCCcchHHHHH-HHHcCCCCCCEEEEecC----------CCCCCCHHHHHHHHHHHHhCC
Q psy1785 298 AFPQIKTQGLASCPRLVLYTSEDAHYSIKKL-AAFEGLGSDNVYLIKTD----------ARGRMLPESLRGEIQRTLAEG 366 (629)
Q Consensus 298 ~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka-a~~lGlg~~~v~~V~~d----------~~g~~d~~~Le~~i~~~~~~g 366 (629)
++ .|..+| ...+|+....+ ....|. ..+-++.+ .+|.||+++|+++|.+... .
T Consensus 106 --------~l--~pGDeV--psn~~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~ 169 (450)
T TIGR02618 106 --------AI--KPGDYV--PGNMYFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-D 169 (450)
T ss_pred --------CC--CCcCEE--CCceeHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-c
Confidence 11 133344 45677666555 466665 45555433 3689999999999975211 1
Q ss_pred CCcEEEEEeeCCCcc-ccc---cCHHHHHHHHHHcCCeEEE----ec-Cccccccc-c--ccccccccccccccCCcceE
Q psy1785 367 AVPFMVSATSGTTVL-GAF---DPIPAIADICAEYDMADSV----TW-NPHKLLTA-P--QQCSVFLTRRNYVIEVVADS 434 (629)
Q Consensus 367 ~~~~~Vvat~Gtt~~-G~i---dpl~ei~~i~~~~~~~lhV----A~-gg~~l~~~-~--~~~~~~l~~~~~~i~~gaDs 434 (629)
..+ +|.+....+.. |.. +++++|.++|++||+++|. ++ ++++.... + .+.++-=-.+.+ ... +|+
T Consensus 170 ~~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~-~~~-aD~ 246 (450)
T TIGR02618 170 KIP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEM-MSY-ADG 246 (450)
T ss_pred ccC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHH-hcc-CcE
Confidence 233 34444444443 555 7799999999999999999 34 33221100 0 011100000111 234 999
Q ss_pred EEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHH
Q psy1785 435 VTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEA 514 (629)
Q Consensus 435 v~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~ 514 (629)
+++++||-.++|.| |++.++++++..++......| ..- ..+| .-.+|...++ -.++.-.-. +.
T Consensus 247 ~~~S~~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~--eG~------~tyG---gla~r~~~al--a~gL~e~~~---~~ 309 (450)
T TIGR02618 247 CTMSGKKDCLVNIG-GFLCMNDDEMFQSAKELVVVF--EGM------PSYG---GLAGRDMEAM--AIGIREAVD---YE 309 (450)
T ss_pred EEEeeccCCCCCCc-eEEEeCCHHHHHHHHHHhhhc--CCc------cccC---chhhhhHHHH--HHHHHHhhh---HH
Confidence 99999999999984 666679988777764433222 110 0111 1122332222 222221111 14
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeC--CCCCCCCchhhHHHHHhhHHHHHHH----HHHhcCcEE
Q psy1785 515 HIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIP--PSLRGKEDQADFNELLHKVAPKIKE----RMMKSGSMM 588 (629)
Q Consensus 515 ~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p--~~~~~~~~~~~~~~~l~~~~~~i~~----~l~~~G~~~ 588 (629)
.+++.++.++||.+.|.+. |+.++. ++..+.|-+.... +.+.. .++.. ..++.+++. |-++.|.++
T Consensus 310 y~~~r~~~a~~La~~L~~~-Gvpv~~-p~ggh~V~vda~~~lph~~~----~~~p~--~al~~~ly~~~gir~~e~g~~~ 381 (450)
T TIGR02618 310 YIEHRVKQVRYLGDKLKAA-GVPIVE-PVGGHAVFLDARRFLPHIPQ----DQFPA--QSLAASIYVETGVRSMERGIVS 381 (450)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCcccC-CCCcceEEEEhHHhCCCCCh----hhChH--HHHHHHHHHHhCccEEeeccee
Confidence 5667777899999999998 998875 5555555443211 11111 11211 111112222 112233333
Q ss_pred EeeeecCCc-----cceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 589 ITYQPIHAL-----PNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 589 i~~~~~~~~-----~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+..+-.+. ...+|+++---.-|.++||++.+.|..+.+
T Consensus 382 ~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~ 425 (450)
T TIGR02618 382 AGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYK 425 (450)
T ss_pred cccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHh
Confidence 332221111 257999995444699999999999988764
No 143
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.37 E-value=1.2e-09 Score=118.46 Aligned_cols=309 Identities=13% Similarity=0.116 Sum_probs=181.2
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC---CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ---GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~---~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|........+-..+.+++++.+|.+ ..+.++++|++++...++..... |...|+++.-.+...
T Consensus 61 Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~--------------~gd~Vlv~~P~y~~~ 126 (389)
T PRK05957 61 YQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITD--------------PGDEIILNTPYYFNH 126 (389)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcC--------------CCCEEEEeCCCCcCH
Confidence 4334444556677778888888874 34688899998877655543211 334466666555555
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADS 402 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lh 402 (629)
...++..|+ +++.+|.++++.+|+++|++.|.. .+.+|+.+...+.+|.+-| +++|.++|+++|+++.
T Consensus 127 ~~~~~~~g~---~~~~v~~~~~~~~d~~~l~~~i~~------~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li 197 (389)
T PRK05957 127 EMAITMAGC---QPILVPTDDNYQLQPEAIEQAITP------KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHI 197 (389)
T ss_pred HHHHHhcCC---EEEEeecCCCCCcCHHHHHHhcCc------CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEE
Confidence 666778888 999999988889999999998853 2456777788999999887 8889999999999999
Q ss_pred E--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 403 V--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 403 V--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
+ +|.....-..+. -+. ....+ ... --.++.+.-|.++.| +=+|.+++.+ .+.+........+.
T Consensus 198 ~De~y~~~~~~~~~~-~~~-~~~~~--~~~-~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~~~~~~~~-------- 263 (389)
T PRK05957 198 SDEAYEYFTYDGVKH-FSP-GSIPG--SGN-HTISLYSLSKAYGFASWRIGYMVIPI-HLLEAIKKIQDTIL-------- 263 (389)
T ss_pred EeccchhccCCCCCc-cCh-hhCCC--ccC-cEEEEecchhhccCccceeEEEecCH-HHHHHHHHHHhhcc--------
Confidence 9 665433211100 000 00000 111 234556677998644 2378877654 34433211100000
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee-CCC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAK--GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI-PPS 556 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~-p~~ 556 (629)
.+. ..+.-..+...+ +..-+++..++..+..+++.+.|++++++..+. +|.-+.++ |.. +..
T Consensus 264 ----------~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-~~~gg~~~-~~~~~~~ 328 (389)
T PRK05957 264 ----------ICP---PVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLH-PANGAFYC-FLKVNTD 328 (389)
T ss_pred ----------cCC---CcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc-CCCeeEEE-EEeCCCC
Confidence 011 111222222222 333467777777888888999999887752334 45544433 322 222
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.+ ..++.++|. +.|..+....... ...+++|+++. ..+++++...++.|.+..
T Consensus 329 ~~---------------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 329 LN---------------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG--ALQKATAKEGIERLVQGL 383 (389)
T ss_pred CC---------------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHH
Confidence 11 124666776 4676544322221 11358999995 235666666666555543
No 144
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.37 E-value=2.3e-10 Score=123.84 Aligned_cols=230 Identities=14% Similarity=0.141 Sum_probs=149.7
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH-
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA- 330 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~- 330 (629)
.|....+| +.++++.|.+ ..+++++|+.++..++.+.. + |...|+++...|.+......
T Consensus 60 ~pt~~~Le----~~lA~l~G~~--~al~~~sG~~Ai~~~l~al~-~-------------~Gd~Vv~~~~~y~~~~~~~~~ 119 (386)
T PRK06767 60 NPTVKLFE----ERMAVLEGGE--EALAFGSGMAAISATLIGFL-K-------------AGDHIICSNGLYGCTYGFLEV 119 (386)
T ss_pred CcchHHHH----HHHHHHhCCC--cEEEECCHHHHHHHHHHHHh-C-------------CCCEEEEcCCcHHHHHHHHHH
Confidence 45554444 4588888864 57888888877655543322 1 34456677776665444333
Q ss_pred ---HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 331 ---FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 331 ---~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
..|+ ++..++. .|+++++++|.+ .+.+|.....++.+|.+-|+++|.++|+++|++++| +|
T Consensus 120 ~~~~~gi---~~~~~~~-----~d~~~l~~~i~~------~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~ 185 (386)
T PRK06767 120 LEEKFMI---THSFCDM-----ETEADIENKIRP------NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTF 185 (386)
T ss_pred HHhhcCe---EEEEeCC-----CCHHHHHHhhCc------CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCC
Confidence 3344 4444432 478888887753 245777788889999999999999999999999999 77
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+.... .. .+..|+|+++.+++|+++++-. .|+++.+++ .+...... ... .
T Consensus 186 a~~~~-~~-------------pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~----~~~---------~ 237 (386)
T PRK06767 186 CSPYL-QR-------------PLELGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRP----MRK---------D 237 (386)
T ss_pred ccccc-CC-------------chhcCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHH----HHH---------H
Confidence 54222 11 1234699999999999988765 466666553 33322110 000 0
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC-----------CceEEEEEe
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP-----------ECTNISFWY 552 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p-----------~~~~v~F~~ 552 (629)
.+ -....+..|+.++. .+-+..++++..+++.++++.|+++|+++.+. -| ..++|+|.+
T Consensus 238 ~g-------~~~~~~~a~l~~~~--L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~-~p~~~~~~~~~~~~gg~vsf~l 307 (386)
T PRK06767 238 IG-------GIMAPFDAWLLLRG--LKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVW-YPEGELASRQMKRGGGVISFSI 307 (386)
T ss_pred hC-------CCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEE-CCCcHHHHHhCCCCCceEEEEE
Confidence 01 01134556666554 44566788999999999999999999998654 23 346789986
Q ss_pred e
Q psy1785 553 I 553 (629)
Q Consensus 553 ~ 553 (629)
.
T Consensus 308 ~ 308 (386)
T PRK06767 308 K 308 (386)
T ss_pred c
Confidence 4
No 145
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.37 E-value=2.2e-10 Score=123.24 Aligned_cols=217 Identities=15% Similarity=0.151 Sum_probs=146.3
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH--
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL-- 328 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka-- 328 (629)
..|....+|+. ++++.|.+ ..+++++|+.|+..++.+... |...|+++...+......
T Consensus 48 gnPt~~~lE~~----lA~l~g~~--~~~~~~sG~~Ai~~al~all~--------------~GD~Vl~~~~~y~~t~~~~~ 107 (377)
T TIGR01324 48 GTLTHFALQDA----MCELEGGA--GCYLYPSGLAAVTNSILAFVK--------------AGDHVLMVDSAYEPTRYFCD 107 (377)
T ss_pred CCccHHHHHHH----HHHHhCCC--cEEEECcHHHHHHHHHHHhcC--------------CCCEEEEcCCCcHHHHHHHH
Confidence 35666666665 67777753 688999999988777654321 334455666665554432
Q ss_pred --HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 329 --AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 329 --a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
....|+ ++..++.+ +.+.|+++|.+ .+.+|+....++.+|.+.||++|+++|+++|+++.| +
T Consensus 108 ~~~~~~gi---~v~~~d~~-----~~e~l~~~i~~------~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t 173 (377)
T TIGR01324 108 IVLKRMGV---DITYYDPL-----IGEDIATLIQP------NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNT 173 (377)
T ss_pred HHHHhcCc---EEEEECCC-----CHHHHHHhcCC------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECC
Confidence 344566 66666432 22566666643 356788888999999999999999999999999999 7
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|+.+....+ ++.|+|.++.+.|||++++.+ .|+++.++ +.+..... ..++
T Consensus 174 ~a~g~~~~p--------------l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~-~~~~~l~~--~~~~----------- 225 (377)
T TIGR01324 174 WAAGLLFKP--------------LEHGVDISIQAGTKYLVGHSDIMIGTVVANA-RTWDQLRE--HSYL----------- 225 (377)
T ss_pred CccccccCc--------------cccCceEEEecCceeccCCCCceEEEEEeCH-HHHHHHHH--HHHH-----------
Confidence 765543222 345799999999999998854 46555543 33332211 0111
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
.|....+...|..++ |.+-+..++++..++|..+++.|+++|.++-+
T Consensus 226 --------~G~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v 272 (377)
T TIGR01324 226 --------MGQMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVARV 272 (377)
T ss_pred --------hCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEE
Confidence 122234566777766 45566777999999999999999999887433
No 146
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.37 E-value=3.1e-10 Score=124.27 Aligned_cols=237 Identities=17% Similarity=0.143 Sum_probs=152.4
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH----H
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK----K 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~----k 327 (629)
.|....+|+ .++++.|.+ .++++++|+.++..++.+... |...|+++...|.... .
T Consensus 62 ~p~~~~le~----~lA~l~g~~--~al~~~SG~~Ai~~al~all~--------------pGd~VIv~~~~y~~t~~~~~~ 121 (427)
T PRK05994 62 NPTNAVLEE----RVAALEGGT--AALAVASGHAAQFLVFHTLLQ--------------PGDEFIAARKLYGGSINQFGH 121 (427)
T ss_pred CccHHHHHH----HHHHHhCCC--cEEEEcCHHHHHHHHHHHHhC--------------CCCEEEEecCcchhHHHHHHH
Confidence 454444444 578888765 478899999988877655422 3345666767776433 3
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++.+ |+++|+++|.. .+.+|.....++.+|.+-|+++|.++|+++|++++| ++
T Consensus 122 ~~~~~G~---~v~~vd~~-----d~~~l~~ai~~------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~ 187 (427)
T PRK05994 122 AFKSFGW---QVRWADAD-----DPASFERAITP------RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTL 187 (427)
T ss_pred HHHhcCc---EEEEECCC-----CHHHHHHhcCc------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCc
Confidence 4566777 88888753 78888888753 355677788889999999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccc-hhhhhhcCCCCccccCCcCCCcc--
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQS-VLTECHSASASYLFQKDKFYDTK-- 481 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~-~l~~~~~~~~~yl~~~~~~~~~~-- 481 (629)
...... . . ++.|+|.++.++||+++.|.+ .|.+++.... .+.. .....++...+....+.
T Consensus 188 a~~~~~-~-----------p--l~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~~~~~~~~~~ 251 (427)
T PRK05994 188 ASPYLI-R-----------P--IEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEPRPEYHGLVL 251 (427)
T ss_pred cccccC-C-----------c--cccCCcEEEEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCCcchhhhhhH
Confidence 543221 2 1 344799999999999998764 4555554221 1100 00011222111000000
Q ss_pred c-CCC-------C---ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 482 Y-DSG-------D---KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 482 ~-~~~-------~---~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
. +.+ . .....|.....+.+|+.++ |.+-+..++++..++|.++.+.|+++|+++-+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~ 319 (427)
T PRK05994 252 HETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVSWVN 319 (427)
T ss_pred HHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 0 000 0 0001233456677777665 567788899999999999999999999986543
No 147
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.36 E-value=5.4e-10 Score=119.42 Aligned_cols=286 Identities=12% Similarity=0.101 Sum_probs=180.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++.++.+..+..+++|++++...++.+... |...|++..-+...+..+++..|. ++
T Consensus 62 ~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~---~~ 124 (351)
T PRK14807 62 EKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFIN--------------KGDVVIYPHPSFAMYSVYSKIAGA---VE 124 (351)
T ss_pred HHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcC--------------CCCEEEEeCCChHHHHHHHHHcCC---eE
Confidence 3455667777888877889999998876655543211 333455555555566677888998 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
+.|+.++++.+|+++|++++... .+.+|+.+...+.+|.+-+.+++.+++++++.++.+ +|... ...+ ..
T Consensus 125 ~~v~~~~~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~--~~~~-~~ 196 (351)
T PRK14807 125 IPVKLKEDYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEF--YGNT-IV 196 (351)
T ss_pred EEeecCCCCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhh--cccc-hH
Confidence 99999888899999999887631 244566678899999999999999999998887777 77542 1110 00
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcc
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD 496 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 496 (629)
+ .+. ..+ --.+..++.|.++.| +-+|.+.. ++............ +. ..
T Consensus 197 ~-~~~----~~~--~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~~~~~~~~~-----------------~~------~~ 245 (351)
T PRK14807 197 D-VIN----EFE--NLIVLRTLSKAFGLAGLRVGYAVA-NENILKYLNLVKSP-----------------YN------IN 245 (351)
T ss_pred H-Hhh----hCC--CEEEEecchHhcccchhceeeeec-CHHHHHHHHHccCC-----------------CC------cC
Confidence 0 001 011 246778899999744 45677665 43444332111000 00 11
Q ss_pred hHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHH
Q psy1785 497 VLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPK 576 (629)
Q Consensus 497 al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~ 576 (629)
.+...++.+++....+++++++..+..+++.+.|++.+|+++. ++..+.+.+++ + . ...
T Consensus 246 ~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~--~~~~~~~~i~~-~-~-----------------~~~ 304 (351)
T PRK14807 246 SLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY--PSKTNFILVKF-K-D-----------------ADY 304 (351)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC--cCCccEEEEEc-C-C-----------------HHH
Confidence 2222333333333456777777778888899999888888753 34433222222 1 0 125
Q ss_pred HHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 577 IKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 577 i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
+.+.|.++|..+.......+..+++|++++ +.++.++|++.|+++.
T Consensus 305 ~~~~l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 305 VYQGLLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKELL 350 (351)
T ss_pred HHHHHHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHhh
Confidence 677788888654332211233468999997 5788999999998763
No 148
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.36 E-value=7.8e-11 Score=128.87 Aligned_cols=239 Identities=16% Similarity=0.148 Sum_probs=154.0
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH-
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA- 329 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa- 329 (629)
..|....+|+ .++++.|.. ..+++++||.|+..++.... + +...|+++...|.+.....
T Consensus 62 ~~p~~~~le~----~lA~l~g~~--~av~~sSGt~Al~~al~~ll-~-------------~Gd~Vi~~~~~y~~t~~~~~ 121 (433)
T PRK08134 62 SNPTVAVLEE----RVAALEGGV--GAIATASGQAALHLAIATLM-G-------------AGSHIVASSALYGGSHNLLH 121 (433)
T ss_pred cChHHHHHHH----HHHHHhCCC--cEEEeCCHHHHHHHHHHHHh-C-------------CCCEEEEeCCccHHHHHHHH
Confidence 3566655554 478888865 37999999999887765431 1 3446778888887655443
Q ss_pred ---HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 330 ---AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 330 ---~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
...|+ +++.++++ |+++|+++|.+ .+.+|.....++.+|.+-|+++|+++|+++|++++| +
T Consensus 122 ~~l~~~Gi---~v~~vd~~-----d~~~l~~~i~~------~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t 187 (433)
T PRK08134 122 YTLRRFGI---ETTFVKPG-----DIDGWRAAIRP------NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDST 187 (433)
T ss_pred HHHhhCCe---EEEEECCC-----CHHHHHHhcCC------CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECC
Confidence 34677 88888764 78899888864 355777888889999999999999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchh-hhh--h-cCCCCccccCCcCCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVL-TEC--H-SASASYLFQKDKFYD 479 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l-~~~--~-~~~~~yl~~~~~~~~ 479 (629)
++......+ ++.|||.++.++|||++.+-. .|.+++...... ... + ...+.+.........
T Consensus 188 ~a~~~~~~p--------------l~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 253 (433)
T PRK08134 188 FTTPYLLRP--------------FEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFA 253 (433)
T ss_pred CcccccCCc--------------hhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchh
Confidence 655443222 344799999999999987643 455555432111 000 0 000000000000000
Q ss_pred cccCCCC--------ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 480 TKYDSGD--------KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 480 ~~~~~~~--------~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
....... .....+.......+|..++ |.+-+..++++..++|..+.+.|+++|.++-+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V 319 (433)
T PRK08134 254 EESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARV 319 (433)
T ss_pred hccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0000000 0001222345667776664 66778999999999999999999999987644
No 149
>PLN02509 cystathionine beta-lyase
Probab=99.36 E-value=2.9e-10 Score=124.85 Aligned_cols=212 Identities=16% Similarity=0.156 Sum_probs=144.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH----HHHHcCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK----LAAFEGLG 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k----aa~~lGlg 335 (629)
.++.++++++.|-+ ..+.+++|+.+ +.++... - .|...|+++...|.+..+ .....|+
T Consensus 136 ~aLE~~lA~leg~e--~ai~~~SG~aA-i~~il~l-l-------------~~GD~VI~~~~~y~~t~~ll~~~l~~~G~- 197 (464)
T PLN02509 136 DALESLLAKLDKAD--RAFCFTSGMAA-LSAVTHL-I-------------KNGEEIVAGDDVYGGSDRLLSQVVPRSGV- 197 (464)
T ss_pred HHHHHHHHHHhCCC--EEEEeCcHHHH-HHHHHHH-h-------------CCCCEEEEcCCchhhHHHHHHHHHHHCCe-
Confidence 44555677877643 45666777654 3333322 1 134456777788776553 3345676
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
+++.++. .|+++|+++|.. .+.+|.....++.+|.+.||++|+++|+++|+++.| +++......+
T Consensus 198 --~v~~vd~-----~d~e~l~~ai~~------~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~~~~~~p 264 (464)
T PLN02509 198 --VVKRVNT-----TNLDEVAAAIGP------QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMSPVLSRP 264 (464)
T ss_pred --EEEEeCC-----CCHHHHHHhCCc------CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccccccCCh
Confidence 7777753 467888877743 356788889999999999999999999999999999 7654432211
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCC
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 491 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 491 (629)
+..|+|.++.+++||+++|.+ .|+++++++.+...... +. .. .
T Consensus 265 --------------l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-----~~-~~---------------~ 309 (464)
T PLN02509 265 --------------LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-----LQ-NS---------------E 309 (464)
T ss_pred --------------hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-----HH-Hh---------------c
Confidence 233699999999999998876 77777776543322110 10 00 1
Q ss_pred CCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 492 GRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 492 sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
+.......+|+.++ |.+-+..++++..++|+++.+.|+++|.++-+
T Consensus 310 g~~l~p~~A~l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V 355 (464)
T PLN02509 310 GSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKKV 355 (464)
T ss_pred CCCcCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 11235566777666 45677889999999999999999999998544
No 150
>KOG2040|consensus
Probab=99.36 E-value=3.1e-11 Score=129.75 Aligned_cols=384 Identities=11% Similarity=0.109 Sum_probs=235.0
Q ss_pred ChhHHHHhhcccCCCCCCChhHHHHHHHHHhhcccccCCcccccccccccccCCCCHHHHHHhhccCCCCCCCCHHHHHH
Q psy1785 124 NPEELEKKLELGFNAGPSSHGKLIDLMKTVIQYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLELGFNAGPSSHAKLID 203 (629)
Q Consensus 124 ~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~~lp~~~~~~~~il~ 203 (629)
.|.|.+++++ -.+...+-+.+++.++-+++.-. ...+| .+..|.++++
T Consensus 60 ~~~dq~~ml~------tlG~~dl~~l~~~~VP~~Ir~~~-------------------------~l~~~-~~~~E~eml~ 107 (1001)
T KOG2040|consen 60 SPTDQQQMLD------TLGYKDLDELIEKTVPKSIRLKR-------------------------PLKMD-KPLCESEMLQ 107 (1001)
T ss_pred CchHHHHHHH------hcChhhHHHHHHhhcchhhcccc-------------------------hhcCC-CCcCHHHHHH
Confidence 5677888877 45666666666766555554332 23344 4789999999
Q ss_pred HHHHHhcccccCCCCccccccCCCCChHHHHHHHHH------HhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCe
Q psy1785 204 LMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLA------DALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDG 277 (629)
Q Consensus 204 ~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt------~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g 277 (629)
.++++...+..+.+=.-+||..+.+. ..+...++. .++ +++.|.+++..+---..+.+++++.|++-++.
T Consensus 108 ~l~~ia~kNk~~ksfIGmGYyn~~vP-~~I~RNilenp~W~TqYT---PYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNA 183 (1001)
T KOG2040|consen 108 HLEDIASKNKIWKSFIGMGYYNTHVP-AVILRNILENPGWYTQYT---PYQAEISQGRLESLLNYQTMITDLTGLPMANA 183 (1001)
T ss_pred HHHHHHhhhhHHHHhhccccccccCc-HHHHHHhhhCCcceeccC---CCchhhhhhhHHHHhhhHHhhhhccCCcccch
Confidence 99998877654432222344444333 334444333 333 67778888777666667889999999999999
Q ss_pred EEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH----HHcCCCCCCEEEEecCCCCCCCHH
Q psy1785 278 IFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA----AFEGLGSDNVYLIKTDARGRMLPE 353 (629)
Q Consensus 278 ~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa----~~lGlg~~~v~~V~~d~~g~~d~~ 353 (629)
.+..-||.+...+.++.+... ..+ .+++...|+-..... .-+|+ ++..++
T Consensus 184 SLLDEgTAaaEAm~l~~~~~k-----------rkk--~vvd~~~hpqtlsV~~TRa~~~~i---~v~~~~---------- 237 (1001)
T KOG2040|consen 184 SLLDEGTAAAEAMALCNRINK-----------RKK--FVVDSNCHPQTLSVVKTRAKGFGI---KVVVSD---------- 237 (1001)
T ss_pred hhhccchhHHHHHHHHHhhcc-----------cce--EEecCCCCcchhhhhhccccccce---eEEecC----------
Confidence 999999998877777766541 123 556778887543332 23343 332222
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCccccccccccccccccccccccCCcce
Q psy1785 354 SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLTRRNYVIEVVAD 433 (629)
Q Consensus 354 ~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~~~~~~i~~gaD 433 (629)
.++.-.. .....-|.+-+ +...|.+.|..++++.+++.+..+.+|-+...+-. |+.. -+.|||
T Consensus 238 -~~~~~~s----~~~v~gvlvQY-P~t~G~i~d~~el~~~a~~~~s~vv~atDLLaLti--------LrpP---gefGaD 300 (1001)
T KOG2040|consen 238 -IKEADYS----SKDVSGVLVQY-PDTEGSVLDFDELVELAHANGSLVVMATDLLALTI--------LRPP---GEFGAD 300 (1001)
T ss_pred -HHHhhcc----ccceeEEEEEc-CCCCCcccCHHHHHHHhhccCceEEEeehhhHHHc--------cCCh---hhcCce
Confidence 1111111 11233344444 45559999999999999999988777554433211 0111 355899
Q ss_pred EEEeCCCCCCCCCCccE-----EEEEec-------------------cchhhhhhcCCCCccccCCcCCCcccCCCCccC
Q psy1785 434 SVTWNPHKLLTAPQQCS-----VFLTRH-------------------QSVLTECHSASASYLFQKDKFYDTKYDSGDKHI 489 (629)
Q Consensus 434 sv~~~~HK~l~~P~~~g-----~ll~r~-------------------~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 489 (629)
+++.+.+.+ |+|+|-| +|.+++ +..++.+++.+.+++++...++++
T Consensus 301 IavGSsQRF-GVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKATSNI--------- 370 (1001)
T KOG2040|consen 301 IAVGSSQRF-GVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKATSNI--------- 370 (1001)
T ss_pred eeecccccc-CccccCCCchHHHHHHHHHHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhccchhh---------
Confidence 999999964 6888844 333332 123333444555555554433222
Q ss_pred CCCCCcchHHHH-HHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHH
Q psy1785 490 QCGRKPDVLKFW-FMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNE 568 (629)
Q Consensus 490 ~~sr~~~al~~w-~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~ 568 (629)
|+-++-...+. +.--.+|.+|++++.++.+.++-+|...|+.. |-+++. .+.+-++..+... + .
T Consensus 371 -CTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~-k~fFDTLkI~~~~-s---------~-- 435 (1001)
T KOG2040|consen 371 -CTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQH-KPFFDTLKIRCGC-S---------A-- 435 (1001)
T ss_pred -hHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhcc-ccccceEEEEecC-c---------H--
Confidence 44333111111 11234699999999999999999999999986 788887 7777777776531 0 1
Q ss_pred HHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 569 LLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 569 ~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.+++++-.+++. ....+.. +.+-+++- +.++++|+|.|+..+.
T Consensus 436 ------~~~l~rA~~~~i---Nlr~~ed--~tigvslD-ETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 436 ------EEVLDRAAKRQI---NLRLVED--GTIGVSLD-ETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ------HHHHHHHHhhcC---ceEEeec--CceEEeec-ccccHHHHHHHHHHHc
Confidence 234444444442 1122222 34777884 8999999999998774
No 151
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.36 E-value=3.3e-10 Score=122.40 Aligned_cols=218 Identities=17% Similarity=0.144 Sum_probs=148.9
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA 330 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~ 330 (629)
..|....+|+. +++++|.+ +.+++++|+.++..++.+... |...|+++...|.+......
T Consensus 51 ~np~~~~lE~~----lA~l~g~~--~~l~~~sG~~Ai~~~l~~ll~--------------~GD~Vlv~~~~y~~~~~~~~ 110 (385)
T PRK08574 51 ENPTLRPLEEA----LAKLEGGV--DALAFNSGMAAISTLFFSLLK--------------AGDRVVLPMEAYGTTLRLLK 110 (385)
T ss_pred CCccHHHHHHH----HHHHhCCC--cEEEeCCHHHHHHHHHHHHhC--------------CCCEEEEcCCCchhHHHHHH
Confidence 45666555554 78888864 578888999888777654321 34457778888888766654
Q ss_pred H---cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 331 F---EGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 331 ~---lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
. .|+ +++.+. +|+++|+++|.+ + .+.+|.....++.+|.+-|+++|+++|+++|+++.| +|
T Consensus 111 ~~~~~g~---~v~~~~------~d~~~l~~~i~~----~-~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~ 176 (385)
T PRK08574 111 SLEKFGV---KVVLAY------PSTEDIIEAIKE----G-RTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTF 176 (385)
T ss_pred HhhccCc---EEEEEC------CCHHHHHHhcCc----c-CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCC
Confidence 3 354 555543 357788777643 1 345677788889999999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+......+ ++.|+|.++.++||++++|-. .|+++++++.+........ .+
T Consensus 177 a~~~~~~~--------------l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~------------- 228 (385)
T PRK08574 177 ATPLLYRP--------------LRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RR------------- 228 (385)
T ss_pred CccccCCh--------------hhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hh-------------
Confidence 54332211 234699999999999998865 3657776655444321110 00
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
.|.....+..|+.++ |.+-+..++++..+++.++.+.|++.|.++-+
T Consensus 229 -------~g~~~~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V 275 (385)
T PRK08574 229 -------LGTIMQPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAEV 275 (385)
T ss_pred -------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEE
Confidence 111223455666665 45668889999999999999999999987633
No 152
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.35 E-value=1e-11 Score=139.34 Aligned_cols=286 Identities=13% Similarity=0.103 Sum_probs=196.7
Q ss_pred HHHHHHHHHHHHHHHHHhhhhc-cccCCCcccccCChhHHHHhhcccCCCCCCChhHHHHHHHHHh-hcccccCCc-ccc
Q psy1785 90 QVRHERFFRDAFEVLLRDGVFK-ATSRGNKVNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTVI-QYSVKTGHP-YFV 166 (629)
Q Consensus 90 ~~~~~~~~~~~~d~l~~~~~~~-~~~~~~~V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l-~y~v~t~hP-~F~ 166 (629)
.+...+.+..++++.. .|.-. .... +|++++. .++.....+.+++++++.+.+ ++++.++|| ||+
T Consensus 20 ~~~~~~~~~~~~~~r~-~~~p~d~~~~--------~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~ 87 (608)
T TIGR03811 20 KDLLNKLVDEHLGWRQ-NYMPQDKPVI--------SPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYW 87 (608)
T ss_pred HHHHHHHHHHHHHHHH-hcCCCCCCCC--------CHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceE
Confidence 4556777888888887 45432 1222 3344444 345566667899999998655 899999999 999
Q ss_pred cccccccccCCCCHHHHHHhhcc------CCCCCCCCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHH
Q psy1785 167 NQLFSSKVNEWVNPEELEKKLEL------GFNAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLAD 240 (629)
Q Consensus 167 ~~l~s~~v~~~~~~~~l~~~~~~------~lp~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~ 240 (629)
+++.+.+..+++.++.+...+|. ..|.....|.++++|+.++++++. -.|++.++.+.+++.|-|+++
T Consensus 88 ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~------~~G~~TsGGT~ANl~aL~~AR 161 (608)
T TIGR03811 88 GHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN------GWGHIVADGSLANLEGLWYAR 161 (608)
T ss_pred EECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC------CCeEEeCChHHHHHHHHHHHH
Confidence 99999999999999999888773 345455688999999999997752 358899999999999988876
Q ss_pred hcCCCc--------------ccccc---------------------------------Ch----hHHHHHHHHHHHHHHH
Q psy1785 241 ALNPSV--------------YTYEV---------------------------------SP----VFSLMEEHVLAQMRTI 269 (629)
Q Consensus 241 ~~n~~~--------------~~~~~---------------------------------~p----~~~~~E~~~~~~l~~l 269 (629)
.....+ ..|+. .. .+.+--+....+.+++
T Consensus 162 ~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~i 241 (608)
T TIGR03811 162 NIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADI 241 (608)
T ss_pred HhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHH
Confidence 431000 00100 00 0001114557788899
Q ss_pred hCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCC
Q psy1785 270 VGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGR 349 (629)
Q Consensus 270 ~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~ 349 (629)
+|+.....+.++ ++.+..+...++++.+.+.+++|. .|..||.+.+++ +.|.
T Consensus 242 lGlG~~~vv~Vp--vD~~~rmd~~~L~~~I~~~~~~g~--p~~~VVataGTT------------------------~~Ga 293 (608)
T TIGR03811 242 IGIGLDQVIPVP--VDSNYRMDINELEKIIRKLAAEKT--PILGVVGVVGST------------------------EEGA 293 (608)
T ss_pred cCCCcccEEEee--cCCCCcCCHHHHHHHHHHHHhcCC--CeEEEEEEcCCc------------------------CCcc
Confidence 999765555555 445566677777777777777774 245677788887 5677
Q ss_pred CCH-HHHHHHHHHHHhCCC-CcEEEEEeeCCCccccc-c------CH---------------------HHHHHHHHHcCC
Q psy1785 350 MLP-ESLRGEIQRTLAEGA-VPFMVSATSGTTVLGAF-D------PI---------------------PAIADICAEYDM 399 (629)
Q Consensus 350 ~d~-~~Le~~i~~~~~~g~-~~~~Vvat~Gtt~~G~i-d------pl---------------------~ei~~i~~~~~~ 399 (629)
+|+ +++.+..++..++|. .|+||++++|+.....+ + |. ++.++..++.+.
T Consensus 294 iDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ 373 (608)
T TIGR03811 294 VDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISE 373 (608)
T ss_pred cCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcC
Confidence 773 333333333344553 27999999999763321 1 11 467777888889
Q ss_pred eEEEecCccccccccccccccc
Q psy1785 400 ADSVTWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 400 ~lhVA~gg~~l~~~~~~~~~~l 421 (629)
.++|++++|+++..|+.|++++
T Consensus 374 ADSItvDpHK~g~~Py~~G~ll 395 (608)
T TIGR03811 374 AESVTIDPHKMGYIPYSAGGIV 395 (608)
T ss_pred ceEEEeCcccccccCCCeEEEE
Confidence 9999999999999999999875
No 153
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.35 E-value=1.7e-11 Score=115.52 Aligned_cols=163 Identities=21% Similarity=0.177 Sum_probs=122.0
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH-HHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK-KLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~-kaa~~lGlg~~~ 338 (629)
.++.++++++++.+...+++++|||+++..++.+.+. ++..|+++...|++.. ..+...|. +
T Consensus 3 ~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~--------------~~~~v~~~~~~~~~~~~~~~~~~g~---~ 65 (170)
T cd01494 3 EELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLG--------------PGDEVIVDANGHGSRYWVAAELAGA---K 65 (170)
T ss_pred HHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCC--------------CCCEEEEeecccceehhhHHHhcCC---E
Confidence 4567889999975557899999999998888777642 1234667778888877 78888888 9
Q ss_pred EEEEecCCCCCCCHH--HHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 339 VYLIKTDARGRMLPE--SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 339 v~~V~~d~~g~~d~~--~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
++.++.++++..+.+ .+++. .....+.+|..+..++..|...|+++|+++|+++++++++ ++++.......
T Consensus 66 ~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~ 140 (170)
T cd01494 66 PVPVPVDDAGYGGLDVAILEEL-----KAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG 140 (170)
T ss_pred EEEeccCCCCccchhhhhhhhc-----cccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccc
Confidence 999998776544332 33222 1234677889999999999999999999999999999999 66665443210
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEe
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTR 455 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r 455 (629)
+ .. ...++|+++.++||++++ .++|++++|
T Consensus 141 --~----~~----~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 141 --V----LI----PEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred --c----cc----ccccCCEEEEEcccccCC-CceEEEEeC
Confidence 0 01 123599999999999998 789999876
No 154
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.34 E-value=4.9e-10 Score=121.27 Aligned_cols=218 Identities=17% Similarity=0.210 Sum_probs=145.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH-H
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA-A 330 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa-~ 330 (629)
.|....+| +.++++.|.+. ++.+++|+.++..++.+... |...|+++..++.+..... .
T Consensus 60 ~p~~~~Le----~~lA~~~g~~~--~i~~~sG~~Ai~~~l~all~--------------~Gd~Vl~~~~~y~~t~~~~~~ 119 (388)
T PRK07811 60 NPTRTALE----EQLAALEGGAY--GRAFSSGMAATDCLLRAVLR--------------PGDHIVIPNDAYGGTFRLIDK 119 (388)
T ss_pred CccHHHHH----HHHHHHhCCCc--eEEeCCHHHHHHHHHHHHhC--------------CCCEEEEcCCCchHHHHHHHH
Confidence 35554444 45788887753 56667778776666554321 3345666777776544332 2
Q ss_pred H---cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 331 F---EGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 331 ~---lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
. .|+ +++.++. .|+++|+++|.+ .+.+|.....++.+|.+.|+++|+++|+++|+++++ +|
T Consensus 120 ~~~~~gi---~~~~~d~-----~d~e~l~~~i~~------~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~ 185 (388)
T PRK07811 120 VFTRWGV---EYTPVDL-----SDLDAVRAAITP------RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTF 185 (388)
T ss_pred hCcCCCe---EEEEeCC-----CCHHHHHHhcCc------CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCC
Confidence 2 344 5555553 488888888754 355777778888899999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+......+ +..|+|.++.+++|++++|.+ .|+++++++.+..... ++...
T Consensus 186 a~~~~~~p--------------~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~-----~~~~~--------- 237 (388)
T PRK07811 186 ASPYLQQP--------------LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFA-----FLQNG--------- 237 (388)
T ss_pred CccccCCc--------------hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHH-----HHHHh---------
Confidence 54322111 233699999999999998754 5777777655443321 11100
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.+.....+..|+.++.+ +-+..++++..+++..+.+.|++.|+++-+.
T Consensus 238 -------~g~~~s~~~a~l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~ 285 (388)
T PRK07811 238 -------AGAVPGPFDAYLTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVSTVL 285 (388)
T ss_pred -------cCCCCCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEE
Confidence 11122345567666543 4577888999999999999999999987553
No 155
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.34 E-value=8e-10 Score=117.69 Aligned_cols=284 Identities=13% Similarity=0.081 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEE--c-CCcchHHHHHHHHc
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYT--S-EDAHYSIKKLAAFE 332 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~--s-~~~H~Si~kaa~~l 332 (629)
..+..++.+++++++|.+..+..+++||+++|..++.+... |...|++ + ...|.++..+++..
T Consensus 53 ~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~--------------~gd~Vli~~~d~p~~~s~~~~~~l~ 118 (346)
T TIGR03576 53 AIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEP--------------PGRKVVHYLPEKPAHPSIPRSCKLA 118 (346)
T ss_pred HHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCC--------------CCCEEEECCCCCCCchhHHHHHHHc
Confidence 36778888889999999877899999999998877664322 2233432 2 46899999999998
Q ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 333 GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 333 Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
|. +++.. .|+++| ... . .+.+|+. .|++..|.+ .||++|.++|+++++|+.| ||+.
T Consensus 119 ga---~~~~~-------~~l~~l----~~~-~---~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~ 179 (346)
T TIGR03576 119 GA---EYFES-------DELSEL----KKI-D---GTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA 179 (346)
T ss_pred CC---EEecc-------CCHHHH----hhC-c---CceEEEE-ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc
Confidence 86 44222 234433 211 1 2334444 467888888 8999999999999999999 8876
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
+..... +.+.. .+.++|.++.+++|++.++. .|+++.. +.+.........+|+.
T Consensus 180 ~~~~~~--~~~~~-------~~~~~divv~s~SKalaG~r-~G~v~~~-~~li~~l~~~~~~~~~--------------- 233 (346)
T TIGR03576 180 RVRRLY--GQPPA-------LDLGADLVVTSTDKLMDGPR-GGLLAGR-KELVDKIKSVGEQFGL--------------- 233 (346)
T ss_pred cccccC--CCCCH-------HHcCCcEEEeccchhccccc-eEEEEeC-HHHHHHHHHhhcCccc---------------
Confidence 543210 01100 12247999999999875554 4655554 4455433222222221
Q ss_pred cCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHH
Q psy1785 488 HIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFN 567 (629)
Q Consensus 488 ~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~ 567 (629)
+........+..+|+.+ ..+.+.+...+..+++.+.+.. +.+. ++..+-+.+++.+ . +.
T Consensus 234 ---s~~~~~~~aa~~aL~~~---~~~~~~~~l~~r~~~~~~~l~~---~~~~--~~~~~f~~~~~~~-~-----~~---- 292 (346)
T TIGR03576 234 ---EAQAPLLAAVVRALEEF---ELSRIRDAFKRKEEVYLRLFDK---LNVE--RTPTGFVIKGVEE-E-----KL---- 292 (346)
T ss_pred ---CccHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHh---CCCC--cCCCeEEEEeCCC-C-----CH----
Confidence 11111222333334332 2234445555566666666653 3332 2233322222211 0 00
Q ss_pred HHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 568 ELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 568 ~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.....+.|.+.|.+........+..+++|++++.+.-++.++++++++|++-
T Consensus 293 ------~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 293 ------IEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred ------HHHHHHHHHhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 0134556667787554432222334699999974443455899999999864
No 156
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.34 E-value=1.7e-09 Score=114.39 Aligned_cols=312 Identities=13% Similarity=0.178 Sum_probs=201.2
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
+|.+..+|++ +++.+|.+ .++.+++||.|...++.+.- + .|...|+++..+-.+..++.-.
T Consensus 33 G~~v~~FE~~----~ae~~G~k--~ava~~sgT~AL~laL~al~---i----------g~GDeVI~ps~TfvATan~i~~ 93 (374)
T COG0399 33 GPFVRRFEQA----FAEYLGVK--YAVAVSSGTAALHLALLALA---I----------GPGDEVIVPSFTFVATANAVLL 93 (374)
T ss_pred ChHHHHHHHH----HHHHhCCC--eEEEecChHHHHHHHHHhcC---C----------CCCCEEEecCCchHHHHHHHHH
Confidence 6777777664 88888876 58899999999888876432 1 2566788899998999999999
Q ss_pred cCCCCCCEEEEecCCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e--cC
Q psy1785 332 EGLGSDNVYLIKTDAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T--WN 406 (629)
Q Consensus 332 lGlg~~~v~~V~~d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A--~g 406 (629)
.|. +.+.|++|++ +.||++.||++|.+. +..|+.+ ...|..-|+++|.++|++||+++.- | +|
T Consensus 94 ~Ga---~PVFvDid~~T~nid~~~ie~aIt~~------tKAIipV---hl~G~~~dm~~i~~la~~~~l~vIEDaAqa~G 161 (374)
T COG0399 94 VGA---KPVFVDIDPDTLNIDPDLIEAAITPR------TKAIIPV---HLAGQPCDMDAIMALAKRHGLPVIEDAAQAHG 161 (374)
T ss_pred cCC---eEEEEecCCcccCCCHHHHHHHcccC------CeEEEEe---hhccCCCCHHHHHHHHHHcCCeEEEEcchhcc
Confidence 999 9999999955 899999999999873 4455544 4556667899999999999999988 3 33
Q ss_pred cccccccccccccccccccc-ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCC
Q psy1785 407 PHKLLTAPQQCSVFLTRRNY-VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSG 485 (629)
Q Consensus 407 g~~l~~~~~~~~~~l~~~~~-~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 485 (629)
... +.+.. .+-. +-++++.+.|.+.+- ..|++.+.++++.+++...+ ......+. ...
T Consensus 162 a~y------------~gk~vGt~Gd-~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr-----~hG~~~~~--~~~ 220 (374)
T COG0399 162 ATY------------KGKKVGSFGD-IGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLR-----NHGLSRDA--VFK 220 (374)
T ss_pred Cee------------cCcccccccc-eEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHH-----HhCcCCCc--ccc
Confidence 311 11122 2333 788999999999765 67888888876666543211 11100000 011
Q ss_pred CccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhh
Q psy1785 486 DKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQAD 565 (629)
Q Consensus 486 ~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~ 565 (629)
.+....|-+.+.-.+-+++.....+.++++.++-.+++++..+.|++.+++.+-. .+....-+++..+..++...
T Consensus 221 y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~-~~~~~~~~~~~~~i~~~~~~---- 295 (374)
T COG0399 221 YLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPP-EPDGAVHAWHLYTILVDEEG---- 295 (374)
T ss_pred ceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccC-CCCCceeeeeeeEEEecCCC----
Confidence 1122334333333333333334456778888899999999999999998866544 33332233333332222110
Q ss_pred HHHHHhhHHHHHHHHHHhcCcEEEe-eeecC--------------Cc-------cceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 566 FNELLHKVAPKIKERMMKSGSMMIT-YQPIH--------------AL-------PNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 566 ~~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~--------------~~-------~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.+ ...+.+.|.+.|..... +.|+. .. ...+.+-+ +|..+.+|+++++++|+
T Consensus 296 ----~~--R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~-~p~l~~~~~~~V~~~l~ 368 (374)
T COG0399 296 ----IS--RDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL-HPNLSEEDVDRVIEALK 368 (374)
T ss_pred ----CC--HHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC-CCCCCHHHHHHHHHHHH
Confidence 00 13567777777643211 11110 00 12466655 69999999999999999
Q ss_pred HHhh
Q psy1785 624 RLGH 627 (629)
Q Consensus 624 ~l~~ 627 (629)
++..
T Consensus 369 ~~~~ 372 (374)
T COG0399 369 EVLG 372 (374)
T ss_pred HHhc
Confidence 8754
No 157
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.34 E-value=4.7e-10 Score=123.67 Aligned_cols=317 Identities=15% Similarity=0.241 Sum_probs=180.6
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK 327 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k 327 (629)
.|..++....+++. +++++|.+ .+++|+|||.++..++.+... |.. |+.+ ..||....
T Consensus 73 ~Y~~~~g~~~Lrea----ia~~~~~~--~vv~t~ggt~A~~~~~~all~--------------pGD-Vii~-~p~~~~~~ 130 (460)
T PRK13238 73 AYAGSRSYYRLEDA----VKDIFGYP--YTIPTHQGRAAEQILFPVLIK--------------KGD-VVPS-NYHFDTTR 130 (460)
T ss_pred ccCCCCCHHHHHHH----HHHHhCCC--cEEECCCHHHHHHHHHHHhCC--------------CCC-EEcc-CCcccchH
Confidence 45666777666554 66666664 589999999998877554321 333 4444 44765444
Q ss_pred -HHHHcCCCCCCEEEEecCC----------CCCCCHHHHHHHHHHHHhCC-CCcEEEEEeeCCCccc----cccCHHHHH
Q psy1785 328 -LAAFEGLGSDNVYLIKTDA----------RGRMLPESLRGEIQRTLAEG-AVPFMVSATSGTTVLG----AFDPIPAIA 391 (629)
Q Consensus 328 -aa~~lGlg~~~v~~V~~d~----------~g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G----~idpl~ei~ 391 (629)
.....|. +++.+++++ .|.+|+++|++.|.+. + ..+.+|+.+..++.+| ..+++++|+
T Consensus 131 ~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~---~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~ 204 (460)
T PRK13238 131 AHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEV---GAENVPFIVMTITNNSAGGQPVSMANLRAVY 204 (460)
T ss_pred HHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhc---CCCceeEEEEecCCCCCCCcCCCHHHHHHHH
Confidence 4667787 899999863 2559999999999642 2 2456777777777776 346688999
Q ss_pred HHHHHcCCeEEE--ec-Ccccccccc-----ccccccccc-cccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhh
Q psy1785 392 DICAEYDMADSV--TW-NPHKLLTAP-----QQCSVFLTR-RNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTE 462 (629)
Q Consensus 392 ~i~~~~~~~lhV--A~-gg~~l~~~~-----~~~~~~l~~-~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~ 462 (629)
++|++||++++. |. ..+.++... ...++ ... .. -... +|++++++||.+++|.| |++.+++.++...
T Consensus 205 ~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si-~~i~~~-~~s~-~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~ 280 (460)
T PRK13238 205 EIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSI-KEIARE-MFSY-ADGLTMSAKKDAMVNIG-GLLCFRDEDLFTE 280 (460)
T ss_pred HHHHHcCCEEEEECcchhhhhhhhhhccccccCCCH-HHHhhh-hccc-CcEEEEecccCCCCcce-eEEEcChHHHHHH
Confidence 999999999999 33 222222110 00000 000 00 0134 99999999999999986 8888887666554
Q ss_pred hhcCCCCccccCCcCCCcccCCCCccCCCCCCcc-hHHHHHHHHh-cChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 463 CHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD-VLKFWFMWKA-KGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 463 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~w~~l~~-~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
+.... ..... ....++-... ..++-.+++. ...+- ++...+.+++|.+.|.+. |+.++.
T Consensus 281 ~~~~~--~~~~g------------~~t~~g~~~~~~~Ala~~l~e~~~~~~----~~~~~~~~~~l~~~L~~~-G~~~~~ 341 (460)
T PRK13238 281 CRTLC--ILYEG------------FPTYGGLAGRDMEALAVGLYEGMDEDY----LAYRIGQVEYLGEGLEEA-GVPIQT 341 (460)
T ss_pred hhhcc--cccCC------------cccccCcHHHHHHHHHhhHHHhhChHH----HHHHHHHHHHHHHHHHHC-CCCeEc
Confidence 32111 00000 0011221211 2222222321 22222 333344579999999886 999875
Q ss_pred cCCCceEEEE-Eee--CCCCCCCCchhhHHHHHhhHHHHHHHHH-HhcCcEEEeee-------ecCC-----ccceEEEe
Q psy1785 541 DEPECTNISF-WYI--PPSLRGKEDQADFNELLHKVAPKIKERM-MKSGSMMITYQ-------PIHA-----LPNFFRLV 604 (629)
Q Consensus 541 ~~p~~~~v~F-~~~--p~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~G~~~i~~~-------~~~~-----~~~~lR~~ 604 (629)
|.-+-.+| .+. .+...+. .+.. .++...| .+.|...+... +..+ ..+++|++
T Consensus 342 --p~Gg~~v~~d~~~~~~~~~~~----~~~~------~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla 409 (460)
T PRK13238 342 --PAGGHAVFVDAGKFLPHIPAE----QFPA------QALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLA 409 (460)
T ss_pred --cCCceEEEEEchhcCCCCCCC----CCch------HHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEe
Confidence 33322222 111 1111110 0000 1233344 44554433211 1112 13689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 605 LQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 605 ~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.-..-|.+++|++.+.|+.+.+
T Consensus 410 ~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 410 IPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred cccccCCHHHHHHHHHHHHHHHH
Confidence 96445699999999999998764
No 158
>KOG1359|consensus
Probab=99.34 E-value=2.4e-10 Score=113.04 Aligned_cols=293 Identities=16% Similarity=0.191 Sum_probs=198.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC
Q psy1785 255 FSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL 334 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl 334 (629)
+..+.+..-.+++++-|-+ +.++++.+-++|.-++.+.+ .|...|+..+..|.|+....++..
T Consensus 110 tq~iHk~LE~kiAqfh~rE--D~ilypscfdANag~feail--------------~pedAvfSDeLNhASIIdGirLck- 172 (417)
T KOG1359|consen 110 TQDIHKLLESKIAQFHGRE--DTILYPSCFDANAGAFEAIL--------------TPEDAVFSDELNHASIIDGIRLCK- 172 (417)
T ss_pred chHHHHHHHHHHHHHhCCC--ceEEeccccccchHHHHHhc--------------ChhhhhhccccccchhhhhhHHHh-
Confidence 3445666677788887654 67899999999876655432 367778888999999987766554
Q ss_pred CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccc
Q psy1785 335 GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLT 412 (629)
Q Consensus 335 g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~ 412 (629)
..+..|+.+|+..+.+.++.. -.+|+.-.--++-|-|.|+.+|..++++||..+.| +++-++ +.
T Consensus 173 -----------ry~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf-~G 238 (417)
T KOG1359|consen 173 -----------RYRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGF-FG 238 (417)
T ss_pred -----------hhccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeeccccee-ec
Confidence 346789999999988766532 23344444567889999999999999999999999 665544 23
Q ss_pred ccccccccccccc----cccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCcc
Q psy1785 413 APQQCSVFLTRRN----YVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKH 488 (629)
Q Consensus 413 ~~~~~~~~l~~~~----~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 488 (629)
+ ..+. ++++..+|.+.....|.+|.- .|.+.+..+.+.....+...+|||...-+
T Consensus 239 ~--------tGrGt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~li~llrqr~RpylFSnslp----------- 297 (417)
T KOG1359|consen 239 E--------TGRGTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKPLISLLRQRSRPYLFSNSLP----------- 297 (417)
T ss_pred C--------CCCChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChhHHHHHHhcCCceeecCCCC-----------
Confidence 2 2222 144445999999999999854 34555656555555556677899865321
Q ss_pred CCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCCCCCchhhHH
Q psy1785 489 IQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLRGKEDQADFN 567 (629)
Q Consensus 489 ~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~~~~~~~~~~ 567 (629)
-.--..+.|++.++.. -.+.+.+...+.++|++.++.. ||.+... .|-++.+ + | +
T Consensus 298 --pavV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~a-GftIsg~~hPI~pv~---l------G---d---- 353 (417)
T KOG1359|consen 298 --PAVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEAA-GFTISGASHPICPVM---L------G---D---- 353 (417)
T ss_pred --hhhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhc-CceecCCCCCcccee---c------c---c----
Confidence 0011234555544432 1345666777899999998775 9998762 2433322 1 1 1
Q ss_pred HHHhhHHHHHHHHHHhcCcEEEeeee--c-CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 568 ELLHKVAPKIKERMMKSGSMMITYQP--I-HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 568 ~~l~~~~~~i~~~l~~~G~~~i~~~~--~-~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+ ++.+..+.|.++|..+++..+ . .|+ .-||+.++ ...|+||||++++++.++++.
T Consensus 354 a~---lA~~~ad~lLk~Gi~Vigfs~PvVP~gk-ariRVqiS-AaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 354 AR---LASKMADELLKRGIYVIGFSYPVVPKGK-ARIRVQIS-AAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred HH---HHHHHHHHHHhcCceEEeecCCcCCCCc-eEEEEEEe-hhcCHHHHHHHHHHHHHHHHh
Confidence 11 234677889999987666332 2 344 35999996 999999999999999988763
No 159
>PRK10534 L-threonine aldolase; Provisional
Probab=99.34 E-value=2.6e-10 Score=120.85 Aligned_cols=294 Identities=17% Similarity=0.176 Sum_probs=169.4
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
|...|....+++ .+++++|.+. .+++.||++++..++.+... |...|+++...|.+...+
T Consensus 30 Y~~~~~~~~L~~----~la~~~g~~~--~~v~~~g~~a~~~~l~~~~~--------------~gd~vi~~~~~~~~~~~~ 89 (333)
T PRK10534 30 YGDDPTVNALQD----YAAELSGKEA--ALFLPTGTQANLVALLSHCE--------------RGEEYIVGQAAHNYLYEA 89 (333)
T ss_pred cCCCHHHHHHHH----HHHHHhCCCe--EEEeCchHHHHHHHHHHhcC--------------CCCeeEEechhhhhHhcC
Confidence 334455544444 4778888764 47899999988877764321 223455666677544432
Q ss_pred --HHHcC-CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHH---HHHHHHcCCeEE
Q psy1785 329 --AAFEG-LGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAI---ADICAEYDMADS 402 (629)
Q Consensus 329 --a~~lG-lg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei---~~i~~~~~~~lh 402 (629)
+...+ . .++.++.++++.+|+++|++++.+...++..+.+|+.. ++.+|.+.|.++| .++|++++++++
T Consensus 90 ~~~~~~~~~---~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~--np~~G~v~~~~~l~~i~~~~~~~~~~lv 164 (333)
T PRK10534 90 GGAAVLGSI---QPQPIDAAADGTLPLDKVAAKIKPDDIHFARTRLLSLE--NTHNGKVLPREYLKQAWEFTRERNLALH 164 (333)
T ss_pred CchHHhcCc---eEEeecCCCCCCCCHHHHHHhhcccCcCcccceEEEEe--cCCCCeecCHHHHHHHHHHHHHcCCeEE
Confidence 23443 3 67778878889999999998885311111123344444 3335998777665 567899999999
Q ss_pred E--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 403 V--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 403 V--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
| |+.-..... .+.+ .. .+..+.|.++++++|.++.+ .|.+++.++++..........+
T Consensus 165 vDEA~~~~~~~~--~~~~----~~--~~~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~~~---------- 224 (333)
T PRK10534 165 VDGARIFNAVVA--YGCE----LK--EITQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRKMT---------- 224 (333)
T ss_pred eeHHHHHHHHHH--cCCC----HH--HHHhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHHHh----------
Confidence 9 543111000 0000 00 11122577777899998877 5654555665554432111000
Q ss_pred ccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCC
Q psy1785 481 KYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGK 560 (629)
Q Consensus 481 ~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~ 560 (629)
.++-...++....++..+ +...+.+++..+.++++.+.|++. |+++. +|..+.+.+++.+ .
T Consensus 225 ---------~~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~nfv~~~~~~-~---- 285 (333)
T PRK10534 225 ---------GGGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVM--RQDTNMLFVRVGE-E---- 285 (333)
T ss_pred ---------CCchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccC--CCCceEEEEECCc-h----
Confidence 000011112222222222 112344555566778999999997 88765 4565545444321 0
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
. ..++.+.|.++|.+. .. + ..+|++.+ ..+|+++++.+++.|+++.
T Consensus 286 --~----------~~~~~~~l~~~gi~v-~~----~--~~~rl~~~-~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 286 --Q----------AAALGEYMRERNVLI-NA----S--PIVRLVTH-LDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred --h----------HHHHHHHHHHcCeee-cC----C--ceEEEEEE-eCCCHHHHHHHHHHHHHHh
Confidence 0 135677888898653 21 1 25899985 7889999999999998764
No 160
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.33 E-value=1.5e-10 Score=125.49 Aligned_cols=219 Identities=14% Similarity=0.114 Sum_probs=152.8
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH----
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK---- 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~---- 326 (629)
..|....+| +.++++.|.+ .+++++||++++..++.+... |...|+++..+|.+..
T Consensus 63 ~~pt~~~Le----~~lA~l~g~~--~~l~~~sgt~Ai~~~l~al~~--------------~GD~Vl~~~~~y~~~~~~~~ 122 (394)
T PRK07050 63 ATPTSLALA----QRLAEIEGGR--HALLQPSGLAAISLVYFGLVK--------------AGDDVLIPDNAYGPNRDHGE 122 (394)
T ss_pred CCHHHHHHH----HHHHHHhCCC--eEEEeccHHHHHHHHHHHHhC--------------CCCEEEEecCCcccHHHHHH
Confidence 345554444 4578888853 688999999998877765421 3445677777776644
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
..+...|+ +++.++.. +.++|+++|.. .+.+|.....++.+|.+.|+++|+++|+++|+++++ +
T Consensus 123 ~~~~~~Gi---~v~~vd~~-----~~~~l~~~i~~------~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a 188 (394)
T PRK07050 123 WLARDFGI---TVRFYDPL-----IGAGIADLIQP------NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNT 188 (394)
T ss_pred HHHHhcCe---EEEEECCC-----CHHHHHHhcCC------CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECC
Confidence 34566787 78777642 44567676643 356777888888999999999999999999999999 7
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|+......+ ++.|+|.++.+.+|+++...+ .|+++++++++.++..... .+
T Consensus 189 ~a~~~~~~~--------------l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~-~~------------ 241 (394)
T PRK07050 189 YSAGLAFKP--------------FEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLAR-MR------------ 241 (394)
T ss_pred cccccccCH--------------HHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHH-Hh------------
Confidence 766443221 344799999999999987655 5667777765544332110 00
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.|--..+...|.+++ |.+.+..++++..++|.++.+.|+++|+++-+.
T Consensus 242 --------~G~~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~ 289 (394)
T PRK07050 242 --------LGIGVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVL 289 (394)
T ss_pred --------cCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 111224556677665 566778899999999999999999999876554
No 161
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.33 E-value=7.1e-10 Score=120.52 Aligned_cols=217 Identities=16% Similarity=0.176 Sum_probs=144.4
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKK 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~k 327 (629)
.|....+| +.++++.|.+ ..+++++|+.++..++.+. -+ |...|+++..++.. +..
T Consensus 59 ~p~~~~Le----~~lA~l~g~~--~~v~~~sG~~Ai~~~l~al-l~-------------pGD~Vvv~~p~Y~~t~~~~~~ 118 (405)
T PRK08776 59 NPTRDLLG----EALAELEGGA--GGVITATGMGAINLVLNAL-LQ-------------PGDTLVVPHDAYGGSWRLFNA 118 (405)
T ss_pred ChHHHHHH----HHHHHHhCCC--ceEEEcCHHHHHHHHHHHH-hC-------------CCCEEEEccCCchHHHHHHHH
Confidence 45544444 5578888853 5678888887665444332 11 33345555555554 233
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++. .|+++|++++.+ .+.+|.....++.+|.+.|+++|.++|+++|+++.| +|
T Consensus 119 ~~~~~g~---~v~~v~~-----~d~~~l~~~i~~------~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~ 184 (405)
T PRK08776 119 LAKKGHF---ALITADL-----TDPRSLADALAQ------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTF 184 (405)
T ss_pred HHHhcCc---EEEEECC-----CCHHHHHHhcCc------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCC
Confidence 3444455 6666653 478888887743 355677778889999999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
.......+ ++.|+|.++.++||++++|.+ .|+++++++++.++... ...
T Consensus 185 a~~~~~~p--------------l~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~-----~~~---------- 235 (405)
T PRK08776 185 LSPALQKP--------------LEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVW-----WAN---------- 235 (405)
T ss_pred cccccCCc--------------ccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHH-----HHH----------
Confidence 54221111 234699999999999998854 57776766554433211 000
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
.++-....+..|+.++ |.+-++.++++..+++..+.+.|++.|.++-+
T Consensus 236 ------~~g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V 283 (405)
T PRK08776 236 ------ALGLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQV 283 (405)
T ss_pred ------hcCCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 0111235677777664 56778889999999999999999999987644
No 162
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.33 E-value=5e-10 Score=122.42 Aligned_cols=238 Identities=16% Similarity=0.118 Sum_probs=143.9
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH-H
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA-A 330 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa-~ 330 (629)
.|....+| +.++++.|.+ ..+++++|+.++..++.+... |...|+++...+....... .
T Consensus 57 ~pt~~~Le----~~lA~l~g~~--~~l~~ssG~~Ai~~al~al~~--------------~Gd~Vl~~~~~Y~~t~~~~~~ 116 (425)
T PRK06084 57 NPTNDVLE----QRVAALEGGV--GALAVASGMAAITYAIQTIAE--------------AGDNIVSVAKLYGGTYNLLAH 116 (425)
T ss_pred CchHHHHH----HHHHHHhCCC--ceeEehhHHHHHHHHHHHHhC--------------CCCEEEEeCCCcchHHHHHHH
Confidence 45554444 4577888743 577888899887766654432 2223445555444333322 2
Q ss_pred H---cCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 331 F---EGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 331 ~---lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
. .|+ ++..++. .|+++|+++|.+ .+.+|.....++.+|.+-|+++|.++|+++++++.| ++
T Consensus 117 ~l~~~gi---~v~~~d~-----~d~e~le~ai~~------~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~ 182 (425)
T PRK06084 117 TLPRIGI---ETRFAAH-----DDIAALEALIDE------RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTV 182 (425)
T ss_pred hccccee---EEEEECC-----CCHHHHHHHhcc------CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCC
Confidence 2 344 5555542 489999988864 244677778889999999999999999999999999 67
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccch-hhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSV-LTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~-l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+......+ ++.|+|.++.+.||+++++-. .|.+++.+... .... ......+...+..|.....
T Consensus 183 a~~~~~~p--------------~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 247 (425)
T PRK06084 183 ATPVLCRP--------------FEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEH-KERFALLNTPDPSYHGVTY 247 (425)
T ss_pred cccccCCh--------------hhcCCCEEEECchhcccccccceeEEEEeCCccchhhc-cccccccccCCcccccchh
Confidence 64332211 234799999999999987643 34444432211 1000 0000111111111111000
Q ss_pred ---CC--C--------ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 484 ---SG--D--------KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 484 ---~~--~--------~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.+ . .....+-+...+.+|+.++ |.+-+..++++..++|..+.+.|+++|+++-+.
T Consensus 248 ~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~ 315 (425)
T PRK06084 248 TEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVAWVK 315 (425)
T ss_pred hhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 00 0 0011233445667776665 678889999999999999999999999986543
No 163
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.33 E-value=3e-10 Score=122.05 Aligned_cols=227 Identities=19% Similarity=0.185 Sum_probs=145.4
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH--
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA-- 329 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa-- 329 (629)
.|....+|+. ++++. ..+.+++++|+.++..++.+. - .|...|+++...++.....+
T Consensus 50 ~p~~~~Le~~----lA~l~---~~~~v~~~sG~~Ai~~~l~al-l-------------~~Gd~Vl~~~~~y~~~~~~~~~ 108 (366)
T PRK07582 50 NPTWRALEAA----LGELE---GAEALVFPSGMAAITAVLRAL-L-------------RPGDTVVVPADGYYQVRALARE 108 (366)
T ss_pred CccHHHHHHH----HHHHc---CCCEEEECCHHHHHHHHHHHh-c-------------CCCCEEEEeCCCcHhHHHHHHH
Confidence 4555445444 66666 246788888888766555432 1 13345666666665554433
Q ss_pred --HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 330 --AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 330 --~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
...|+ +++.|+.++++. .+. ..+-+|.....++.+|.+.|+++|.++|+++|+++.| +|
T Consensus 109 ~l~~~G~---~v~~v~~~~~~~--------~~~------~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~ 171 (366)
T PRK07582 109 YLAPLGV---TVREAPTAGMAE--------AAL------AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTT 171 (366)
T ss_pred HHhcCeE---EEEEECCCChHH--------Hhc------cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCC
Confidence 34677 888888754321 111 1234566667778889999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
..... ..| ++.|+|.++.++|||+++|.+ .|+++.+++.+........ .+.
T Consensus 172 ~~~~~-~~p-------------~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~-~~~------------ 224 (366)
T PRK07582 172 ATPLG-QRP-------------LELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWR-LLA------------ 224 (366)
T ss_pred CCccc-cCc-------------hhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHH-HHh------------
Confidence 42111 110 234699999999999988876 4777766655443321100 010
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc-c----CC-----------CceE
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL-D----EP-----------ECTN 547 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~-~----~p-----------~~~~ 547 (629)
+-....+..|..++.+ .-+..++++..+++..+.+.|+++|.++-+. + .| ..++
T Consensus 225 --------g~~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~ 294 (366)
T PRK07582 225 --------GAIPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGL 294 (366)
T ss_pred --------CCCCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcce
Confidence 1112356677776654 4577888999999999999999999886553 1 23 3578
Q ss_pred EEEEee
Q psy1785 548 ISFWYI 553 (629)
Q Consensus 548 v~F~~~ 553 (629)
|+|.+.
T Consensus 295 ~s~~~~ 300 (366)
T PRK07582 295 VSFELA 300 (366)
T ss_pred EEEEeC
Confidence 889863
No 164
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.31 E-value=9.7e-10 Score=118.65 Aligned_cols=216 Identities=16% Similarity=0.166 Sum_probs=145.7
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH-HHcCCCCCCE
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA-AFEGLGSDNV 339 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa-~~lGlg~~~v 339 (629)
++.+.++++.|- .++++++||++++..++.+... |...|+++..++.+..... .+.+.+..++
T Consensus 55 ~le~~lA~l~g~--~~v~~~~gg~~Ai~~~l~all~--------------~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v 118 (382)
T TIGR02080 55 LLQQALAELEGG--AGAVVTNTGMSAIHLVTTALLG--------------PDDLLVAPHDCYGGTYRLLNALAKKGCFRV 118 (382)
T ss_pred HHHHHHHHHhCC--CcEEEEcCHHHHHHHHHHHHcC--------------CCCEEEEcCCCcHHHHHHHHHHHhhcCeEE
Confidence 334457888873 4688999998887666554321 3445667777776544432 2233211155
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
..++ ..|+++|+++|.+ .+.+|.....++.+|.+-|+++|.++|+++|+++.| +|.......+
T Consensus 119 ~~~d-----~~d~~~l~~ai~~------~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~~~~~~p---- 183 (382)
T TIGR02080 119 LFVD-----QGDEQALRAALAQ------KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLSPALQNP---- 183 (382)
T ss_pred EEEC-----CCCHHHHHHhcCc------CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcccccCCc----
Confidence 5543 2378888888754 355777888999999999999999999999999988 7754322111
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
+..|+|.++.+++|+++++.+ .|++.++++...+...... .+ .|...
T Consensus 184 ----------l~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~-~~--------------------~g~~~ 232 (382)
T TIGR02080 184 ----------LALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWA-NN--------------------LGVTG 232 (382)
T ss_pred ----------hhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHH-Hc--------------------cCCCC
Confidence 233699999999999988765 6777777665444321100 11 12224
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
..+..|+.++ |.+-+..++++..+++..+.+.|++.|.++-+.
T Consensus 233 sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~ 275 (382)
T TIGR02080 233 GAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIY 275 (382)
T ss_pred CHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEE
Confidence 5677787765 566778889999999999999999999886543
No 165
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.31 E-value=9.8e-10 Score=117.72 Aligned_cols=283 Identities=11% Similarity=0.084 Sum_probs=167.6
Q ss_pred HHHHHHHHHHhCCCCCCeEE-eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIF-CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~-~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.++.+.+++++|.+..+.++ ++|+++++..++.... .|...|+++.-++..+..+++..|+ +
T Consensus 72 ~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~~~~--------------~~gd~vlv~~p~y~~~~~~~~~~g~---~ 134 (361)
T PRK00950 72 PELREALSKYTGVPVENIIVGGDGMDEVIDTLMRTFI--------------DPGDEVIIPTPTFSYYEISAKAHGA---K 134 (361)
T ss_pred HHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHHHhc--------------CCCCEEEEcCCChHHHHHHHHHcCC---E
Confidence 55666788888988777777 5565555443333221 1333455555444455667888898 9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
++.+|.++++.+|+++|++.+.. .+.+|+.+...+.+|.+-|++++.++|+++++++++ ++.... .. .
T Consensus 135 ~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~--~~--~ 204 (361)
T PRK00950 135 PVYAKREEDFSLDVDSVLNAITE------KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA--EY--D 204 (361)
T ss_pred EEEeecCCCCCcCHHHHHHHhcc------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC--cc--c
Confidence 99999888889999999988743 234566678899999999999999999999999999 775432 11 0
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
+..++. ..+. -.+..++.|.++.| .-.|.+...+ ............+ . .
T Consensus 205 ~~~~~~----~~~~--vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~~~~~~~-----------------~------~ 254 (361)
T PRK00950 205 YTPLAL----EYDN--LIIGRTFSKVFGLAGLRIGYGFVPE-WLIDYYMRAKTPF-----------------S------L 254 (361)
T ss_pred hHHHHH----hcCC--EEEEEeehHhhcCchhhcchhcCCH-HHHHHHHHhcCCC-----------------C------C
Confidence 110100 0111 24566888999855 2356665543 3333221111000 0 1
Q ss_pred chHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHH
Q psy1785 496 DVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVA 574 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~ 574 (629)
..+....++..+...+ +++..++..+..+++.+.|. +++ . ++..+.+.+++ + ... .
T Consensus 255 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~-~-~~~~~~i~~~~-~-~~~---------------~ 311 (361)
T PRK00950 255 TRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKV-Y-PSEANFVLVDV-T-PMT---------------A 311 (361)
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeE-C-CCcceEEEEEC-C-CCC---------------H
Confidence 1233333344443333 45555555555555655553 443 2 33444444443 1 110 1
Q ss_pred HHHHHHHHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 575 PKIKERMMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 575 ~~i~~~l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.++.++|.++|..+.......+ ..+++|++++ +.+++++++++|+++.
T Consensus 312 ~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il 360 (361)
T PRK00950 312 KEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV 360 (361)
T ss_pred HHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence 3567778888864433222222 2358999985 6789999999998863
No 166
>PRK09082 methionine aminotransferase; Validated
Probab=99.31 E-value=1.3e-09 Score=118.13 Aligned_cols=307 Identities=13% Similarity=0.072 Sum_probs=185.6
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC---CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG---GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~---~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|........+.+.+.+++.+++|.+. .+.++|+|+++++..++.... .|...|++..-+|.++
T Consensus 63 Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~--------------~~gd~Vli~~p~y~~~ 128 (386)
T PRK09082 63 YPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALV--------------RPGDEVIVFDPSYDSY 128 (386)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHc--------------CCCCEEEEeCCCchhh
Confidence 44445566778888889999988753 368899999998876665432 1344577778889999
Q ss_pred HHHHHHcCCCCCCEEEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCCeE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDMAD 401 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~~l 401 (629)
..+++..|. +++.++.++ ++.+|+++|++.+.. .+.+|+.+...+.+|.+ +++++|.++|+++++++
T Consensus 129 ~~~~~~~g~---~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~l 199 (386)
T PRK09082 129 APAIELAGG---RAVRVALQPPDFRVDWQRFAAAISP------RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYV 199 (386)
T ss_pred HHHHHHcCC---EEEEEecCcccccCCHHHHHHhcCc------cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEE
Confidence 999999998 999999974 578999999988753 24456666677889976 78899999999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
++ +|+....-..+ ..+ +.... +... -..+..++.|.++.|- -+|.++.. ++++...... ..+.
T Consensus 200 i~De~y~~~~~~~~~-~~s-~~~~~--~~~~-~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~~~~~~-~~~~------- 265 (386)
T PRK09082 200 LSDEVYEHIVFDGAG-HAS-VLRHP--ELRE-RAFVVSSFGKTYHVTGWKVGYCVAP-AALSAEFRKV-HQYN------- 265 (386)
T ss_pred EEehhhhhhccCCCC-CCC-hhhCc--CccC-cEEEEeechhhccchhhhhhhhhCC-HHHHHHHHHH-Hhhh-------
Confidence 99 66543221110 000 00111 1222 4577788999997553 36776654 3444332110 0000
Q ss_pred CcccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE-EeeCCC
Q psy1785 479 DTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF-WYIPPS 556 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F-~~~p~~ 556 (629)
.++ .+... .++..| +.. +.+-+++..+...+..+++.+.|++. ++++. +|..+.+++ ++ |+
T Consensus 266 -------~~~--~~~~~q~~~~~~--l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~--~~~g~~~~~~~~-~~- 328 (386)
T PRK09082 266 -------TFT--VNTPAQLALADY--LRA-EPEHYLELPAFYQAKRDRFRAALANS-RFKLL--PCEGTYFQLVDY-SA- 328 (386)
T ss_pred -------cCC--CChHHHHHHHHH--HhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CCCeeEEEEEec-cc-
Confidence 000 00000 112111 221 34445666666677888899999875 77754 355544332 33 21
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHH-HhcCcEEEeeeec---CCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERM-MKSGSMMITYQPI---HALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l-~~~G~~~i~~~~~---~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
..+. +. .++.+.| .+.|.++.....+ ....+++|++++ . ++++++..++.|++
T Consensus 329 ~~~~-~~-----------~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~-~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 329 ISDL-DD-----------VEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA-K--QEETLDAAAERLCQ 385 (386)
T ss_pred cCCC-CH-----------HHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec-C--CHHHHHHHHHHHhh
Confidence 1111 01 2455555 4556544333222 112368999996 3 58888888877765
No 167
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.30 E-value=9.1e-10 Score=118.99 Aligned_cols=215 Identities=18% Similarity=0.190 Sum_probs=145.0
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH-HHHcCCCCCCE
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL-AAFEGLGSDNV 339 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka-a~~lGlg~~~v 339 (629)
.+.++++++.|.+ ..++++||++++..++.+.. .|...|+++...|.+.... ..+...+..++
T Consensus 56 ~L~~~lA~l~g~~--~~i~~~sg~~Ai~~~l~~l~--------------~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v 119 (386)
T PRK08045 56 VVQRALAELEGGA--GAVLTNTGMSAIHLVTTVFL--------------KPGDLLVAPHDCYGGSYRLFDSLAKRGCYRV 119 (386)
T ss_pred HHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHc--------------CCCCEEEEcCCCcHHHHHHHHHHHhhCCeEE
Confidence 3445588888743 58889999887666555321 1444566777777653332 22322221155
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
..++ ..|++++++++.+ .+.+|.....++.+|.+-|+++|.++|+++|+++.| +|.......+
T Consensus 120 ~~vd-----~~d~e~l~~~l~~------~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~~~~~~p---- 184 (386)
T PRK08045 120 LFVD-----QGDEQALRAALAE------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPALQNP---- 184 (386)
T ss_pred EEeC-----CCCHHHHHHhccc------CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCccccCCc----
Confidence 5553 3688888887753 345677788999999999999999999999999999 7755432211
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
++.|+|.++.+.|||++++.+ .|++.++++.+...... ...++ +-..
T Consensus 185 ----------l~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~-~~~~~--------------------g~~~ 233 (386)
T PRK08045 185 ----------LALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW-WANNI--------------------GVTG 233 (386)
T ss_pred ----------hhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHH-HHHhc--------------------CCCC
Confidence 234699999999999998876 67776666544433210 00011 1113
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
..+..|+.++.+ +-+..++++..+++..+.+.|++.|.++-+
T Consensus 234 ~p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V 275 (386)
T PRK08045 234 GAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKL 275 (386)
T ss_pred CHHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 557778777754 458899999999999999999999988644
No 168
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.30 E-value=1.7e-10 Score=123.28 Aligned_cols=283 Identities=11% Similarity=0.108 Sum_probs=179.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCC-eEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPR-LVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~-~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.++.+++++.+|++..+.++++|++++...++.+... |. ..|++..-++......++..|. +
T Consensus 60 ~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~--------------~g~~~vli~~P~y~~y~~~~~~~G~---~ 122 (351)
T PRK01688 60 KAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCE--------------PGKDAILYCPPTYGMYSVSAETIGV---E 122 (351)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC--------------CCCCEEEEcCCCHHHHHHHHHHcCC---E
Confidence 5677789999999888999999999987665543211 22 4566677777778888999998 9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--CCeEEE--ecCcccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--DMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~~~lhV--A~gg~~l~~~~ 414 (629)
++.||.++++.+|+++|++++. .+.+|+.+..++.+|.+-+.+++.++++.. +.+++| +|..+... .
T Consensus 123 ~~~v~~~~~~~~d~~~l~~~~~-------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~-~- 193 (351)
T PRK01688 123 IRTVPTLDNWQLDLPAIADNLD-------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQ-A- 193 (351)
T ss_pred EEEeecCCCCCCCHHHHHHhcc-------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCC-C-
Confidence 9999998888999999988762 134677778999999999988888877643 567777 76543211 0
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
.+..++. . .. ==.+.-++.|+++.| +-+|.++... +.+........+| ..+
T Consensus 194 -s~~~~~~--~--~~--n~iv~rSfSK~~glaGlRiGy~i~~~-~~i~~l~~~~~~~-------------------~v~- 245 (351)
T PRK01688 194 -SLAGWLA--E--YP--HLVILRTLSKAFALAGLRCGFTLANE-EVINLLLKVIAPY-------------------PLS- 245 (351)
T ss_pred -ChHHHHh--h--CC--CEEEEecchHhhcCHHHHHhHHhCCH-HHHHHHHhccCCC-------------------CCC-
Confidence 0000000 0 01 125778899988744 3357766543 4443321111110 011
Q ss_pred CcchHHHHHHHHhc---ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 494 KPDVLKFWFMWKAK---GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 494 ~~~al~~w~~l~~~---G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
.+...++..++ +.+-+++.++...+..+++.+.|+++++++.+. ++..+-+.+++. +
T Consensus 246 ---~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-ps~~nfi~~~~~-~--------------- 305 (351)
T PRK01688 246 ---TPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVF-DSETNYILARFT-A--------------- 305 (351)
T ss_pred ---HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEcC-C---------------
Confidence 11111222222 223456667777778899999999988876454 444443333321 0
Q ss_pred hhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 571 HKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 571 ~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..++.+.|.++|.+........+..+++|+++. +++|++.|+++|+
T Consensus 306 ---~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 306 ---SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred ---HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 135677888888654333222244468999996 6799999999873
No 169
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.30 E-value=9.5e-09 Score=112.04 Aligned_cols=312 Identities=13% Similarity=0.091 Sum_probs=186.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--C-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--G-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|...+....+-+.+.+++.+..|++ . .+.++|+|++++...++.+.. .|...|++..-++...
T Consensus 74 Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~--------------~~Gd~Vlv~~P~y~~~ 139 (405)
T PRK06207 74 YTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATV--------------ARGDKVAIVQPDYFAN 139 (405)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc--------------CCCCEEEEeCCCchhH
Confidence 3333445556677788888888964 3 578999999998765554322 1344566666777788
Q ss_pred HHHHHHcCCCCCCEEEEecC-----CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHc
Q psy1785 326 KKLAAFEGLGSDNVYLIKTD-----ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEY 397 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d-----~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~ 397 (629)
...+...|. +++.|+++ ++..+|+++|++++.+ .+.+|+.+...|.+|.+-+ +.+|.++|+++
T Consensus 140 ~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~ 210 (405)
T PRK06207 140 RKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKA------GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRY 210 (405)
T ss_pred HHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhh------cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 888999998 99999986 2468999999988854 2346777888999999977 67788889999
Q ss_pred CCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 398 DMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 398 ~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
++++.+ +|....+-..+. .+ ...+.....-=.++.++.|.++.| +-+|.++.. +.+........ .+..
T Consensus 211 ~~~iI~De~Y~~~~~~~~~~-~~----~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-~~l~~~~~~~~-~~~~-- 281 (405)
T PRK06207 211 GATVIVDQLYSRLLYDGTSY-TH----LRALPIDPENVITIMGPSKTESLSGYRLGVAFGS-PAIIDRMEKLQ-AIVS-- 281 (405)
T ss_pred CCEEEEeccccccccCCCCC-Cc----hhcCCCCcCcEEEEecchhhccCcccceEEEEcC-HHHHHHHHHHH-hHhc--
Confidence 999999 666543211100 00 000000110126778899999866 337777653 34443321111 0000
Q ss_pred CcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeC
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIP 554 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p 554 (629)
.+........+..+++ -+..-+++++++..+..+++.+.|++++++++. +|.-+.+++--.|
T Consensus 282 ---------------~~~~~~~q~a~~~~l~-~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~p~gg~fl~~~l~ 343 (405)
T PRK06207 282 ---------------LRAAGYSQAVLRTWFS-EPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVR--APQAGSYLFPRLP 343 (405)
T ss_pred ---------------cCCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec--CCCeeEEEEEeCc
Confidence 0111111111112222 122236777778888888899999888788754 4655554433222
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+. .. + ...+.+.|. +.|..+..+.... ...++||++++ . +.++++.-++.|.++.+
T Consensus 344 ~~--~~-~-----------~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~-~--~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 344 RL--AV-S-----------LHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS-Q--DHAAAVAAAERIAQLIE 401 (405)
T ss_pred cc--CC-C-----------HHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec-C--CHHHHHHHHHHHHHHHH
Confidence 11 00 0 024566675 5686554433322 22469999997 3 57887777777766543
No 170
>PRK04311 selenocysteine synthase; Provisional
Probab=99.30 E-value=4e-09 Score=115.95 Aligned_cols=296 Identities=13% Similarity=0.101 Sum_probs=166.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH------HHHHHHHcC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS------IKKLAAFEG 333 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S------i~kaa~~lG 333 (629)
..+.+.+++++|.+ ..+++++|+.++..++.. .. +...|++|...|++ +...+...|
T Consensus 130 ~~~e~~lA~l~Gae--~a~vv~sgtaAl~l~l~~-l~--------------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G 192 (464)
T PRK04311 130 RALAALLCALTGAE--DALVVNNNAAAVLLALNA-LA--------------AGKEVIVSRGELVEIGGAFRIPDVMRQAG 192 (464)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHH-hC--------------CCCEEEEcchhhhhcCcchhhHHHHHHCC
Confidence 35667799999976 478888888887766632 21 23356667666653 334556678
Q ss_pred CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCc--cc--cccCHHHHHHHHHHcCCeEEE-e-cCc
Q psy1785 334 LGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTV--LG--AFDPIPAIADICAEYDMADSV-T-WNP 407 (629)
Q Consensus 334 lg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~--~G--~idpl~ei~~i~~~~~~~lhV-A-~gg 407 (629)
+ +++.|+++ +..++++++++|.+ .+.+|..++.++. .| ..-|+++|+++|++||+.+.| + .|.
T Consensus 193 ~---~l~~v~~~--~~t~~~dle~aI~~------~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~ 261 (464)
T PRK04311 193 A---RLVEVGTT--NRTHLRDYEQAINE------NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGS 261 (464)
T ss_pred c---EEEEECCC--CCCCHHHHHHhcCc------cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcc
Confidence 7 78777653 45688999998864 2445666666554 44 567999999999999999999 3 222
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
..-+. .+.+..-....+ -++.|+|.+++++|||+++|. +|+++.|+ +++..... + + +.+.
T Consensus 262 l~~~~-~~gl~~~p~~~~-~l~~GaDiv~fSg~K~LgGp~-~G~i~g~~-~li~~l~~-~-~-~~r~------------- 321 (464)
T PRK04311 262 LVDLS-QYGLPDEPTVQE-LLAAGVDLVTFSGDKLLGGPQ-AGIIVGKK-ELIARLKK-H-P-LKRA------------- 321 (464)
T ss_pred cccch-hccCCCCCchhh-HHhcCCcEEEecCcccccCCc-eEEEEEcH-HHHHHHhh-c-h-hHHH-------------
Confidence 11000 000000000011 134579999999999999994 88888875 34432210 0 0 1000
Q ss_pred cCCCCCC-cchHHHHHHHHhc--------Chhh---HHHHHHHHHHHHHHHHHHHhcCC--C--cEEEcc--------CC
Q psy1785 488 HIQCGRK-PDVLKFWFMWKAK--------GTDG---LEAHIDKSFDNAKYFTDKIRHRP--G--FKLVLD--------EP 543 (629)
Q Consensus 488 ~~~~sr~-~~al~~w~~l~~~--------G~~G---~~~~~~~~~~la~~l~~~L~~~~--g--~~l~~~--------~p 543 (629)
+.+.+- ..++..| +..+ +..+ +....++..+.|+.+.+.|+..+ + .+++.. .|
T Consensus 322 -lr~dk~~l~~l~~~--l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p 398 (464)
T PRK04311 322 -LRVDKLTLAALEAT--LRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLP 398 (464)
T ss_pred -HhcchHHHHHHHHH--HHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCc
Confidence 000000 0122222 2211 1112 33345667778888888887764 3 344421 12
Q ss_pred C--ceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHH
Q psy1785 544 E--CTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDE 621 (629)
Q Consensus 544 ~--~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~ 621 (629)
. +..++..+.+.++. ..++.++|.+.-.-.++ ...++ .+.+-+ -...++|++.+++.
T Consensus 399 ~~~~~~~~v~~~~~~~~---------------~~~l~~~lr~~~~~i~~-r~~~~---~~~ld~--r~~~~~~~~~~~~~ 457 (464)
T PRK04311 399 VDRLPSAAVTLTPKDRS---------------LEALAARLRLLPPPVIG-RIEDG---RLLLDL--RTLEEEDEERLAAA 457 (464)
T ss_pred CCCCCeEEEEEeCCCCC---------------HHHHHHHHhcCCCCEEE-EEECC---EEEEEe--CcCCHHHHHHHHHH
Confidence 2 34455555443221 13556667653332333 22222 344444 35588999999999
Q ss_pred HHHHhh
Q psy1785 622 IERLGH 627 (629)
Q Consensus 622 i~~l~~ 627 (629)
|+++..
T Consensus 458 ~~~~~~ 463 (464)
T PRK04311 458 LLEALN 463 (464)
T ss_pred HHHHhh
Confidence 988753
No 171
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.30 E-value=2.7e-09 Score=116.05 Aligned_cols=290 Identities=16% Similarity=0.136 Sum_probs=175.9
Q ss_pred HHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC---
Q psy1785 260 EHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG--- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg--- 335 (629)
.++.+++++++|.+. ....+++||++++..++..++.. | ...+|.....-|.+...+..+.|..
T Consensus 88 ~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~--------g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~ 155 (398)
T PRK03244 88 IALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLT--------G----RTKIVAAEGGFHGRTMGALALTGQPAKR 155 (398)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHH--------C----CCeEEEECCCcCCccHHHHhccCCcccc
Confidence 456667888887542 57899999999999999988764 2 2335555566676655555443321
Q ss_pred ------CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--
Q psy1785 336 ------SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV-- 403 (629)
Q Consensus 336 ------~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV-- 403 (629)
..++..+|. .|+++|++.+.+ .+.+|+..-..+.+|.+-| +++|+++|++||+++++
T Consensus 156 ~~~~~~~~~~~~~~~-----~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DE 224 (398)
T PRK03244 156 APFEPLPGGVEHVPY-----GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDE 224 (398)
T ss_pred cCCCCCCCCceEeCC-----CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 013444443 378888877732 2445555656778888877 89999999999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
++.+.......+.+ .+. ++ . .|.+++ .|+++..+..|.++.+++ +.. .+.. .. . .
T Consensus 225 v~~g~gr~g~~~~~----~~~--~~-~-pDi~t~--sK~l~~G~~ig~~~~~~~-~~~-~~~~---~~-~-----~---- 279 (398)
T PRK03244 225 VQTGIGRTGAWFAH----QHD--GV-T-PDVVTL--AKGLGGGLPIGACLAFGP-AAD-LLTP---GL-H-----G---- 279 (398)
T ss_pred cccCCcccchHHhh----hhh--CC-C-CCEEEE--chhhhCCcccEEEEEcHH-HHh-hccC---CC-C-----c----
Confidence 66553211110000 111 22 2 677777 599987777899988764 332 2110 00 0 0
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCCCCCc
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~~~~~ 562 (629)
.+. .+.+.....+..+++.+..+. ..++..++.++|++.|++. ++.++.. ...-..+.+.+.++
T Consensus 280 ---~t~-~~~~~~~aaa~a~l~~~~~~~---~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~------- 344 (398)
T PRK03244 280 ---STF-GGNPVACAAALAVLDTIASEG---LLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP------- 344 (398)
T ss_pred ---CCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc-------
Confidence 011 122333344444555444443 4566667889999999885 3322220 12223333433210
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+..+.+++.++|.++ .. . + .++||+++. ...|++||+.+++.|+++.++
T Consensus 345 ----------~~~~~~~~l~~~Gv~~-~~--~-~-~~~iR~~p~-~~~t~~~i~~~~~~l~~~l~~ 394 (398)
T PRK03244 345 ----------VAKAVEAAAREAGFLV-NA--V-A-PDVIRLAPP-LIITDAQVDAFVAALPAILDA 394 (398)
T ss_pred ----------HHHHHHHHHHHCCeEE-ee--c-C-CCEEEEECC-CcCCHHHHHHHHHHHHHHHHh
Confidence 1236778899999653 32 1 1 368999995 778999999999999987654
No 172
>PRK05939 hypothetical protein; Provisional
Probab=99.30 E-value=4.2e-10 Score=121.96 Aligned_cols=238 Identities=14% Similarity=0.067 Sum_probs=147.0
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcch---HHHH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHY---SIKK 327 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~---Si~k 327 (629)
..|....+|+. ++++.|.. ..+.+++|+.++..++.+.. .|...|+++...|. ++.+
T Consensus 45 g~p~~~~lE~~----la~leg~~--~~v~~ssG~~Ai~~~l~all--------------~~Gd~Vv~~~~~y~~t~~~~~ 104 (397)
T PRK05939 45 GTPTTAALEAK----ITKMEGGV--GTVCFATGMAAIAAVFLTLL--------------RAGDHLVSSQFLFGNTNSLFG 104 (397)
T ss_pred CCHHHHHHHHH----HHHHhCCC--eEEEeCCHHHHHHHHHHHHc--------------CCCCEEEECCCccccHHHHHH
Confidence 45777777766 66777754 35666667766655554331 13334566666543 4455
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++. .|+++|+++|.+ .+.+|.+...++.+|.+.|+++|+++|+++|++++| ++
T Consensus 105 ~l~~~G~---~v~~v~~-----~d~e~l~~~l~~------~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~ 170 (397)
T PRK05939 105 TLRGLGV---EVTMVDA-----TDVQNVAAAIRP------NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTM 170 (397)
T ss_pred HHHhcCC---EEEEECC-----CCHHHHHHhCCC------CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCc
Confidence 6666787 8888875 378888888753 356788888899999999999999999999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccch-hhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSV-LTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~-l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+....+.+ .+.|+|.++.+.||+++++-. .|.+++.+... ..........|.......+.. ..
T Consensus 171 a~~~~~~~--------------~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 235 (397)
T PRK05939 171 TSPWLFRP--------------KDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGL-TQ 235 (397)
T ss_pred ccccccCc--------------cccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHH-HH
Confidence 54332211 234799999999999997643 23333322110 000000000110000000000 00
Q ss_pred CCC-ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 484 SGD-KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 484 ~~~-~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
... .....|-.......|+.++ |.+-+..++++..++|..+++.|++.|.++-+
T Consensus 236 ~~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~V 290 (397)
T PRK05939 236 IRKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVARV 290 (397)
T ss_pred HHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000 0001122345667776664 77889999999999999999999999987543
No 173
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.30 E-value=1.6e-09 Score=117.69 Aligned_cols=219 Identities=14% Similarity=0.150 Sum_probs=150.8
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IK 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~ 326 (629)
..|....+|+ .++++.|.+ ..+++++|+.++..++.+... |...|+++...|.. +.
T Consensus 68 ~~p~~~~le~----~lA~l~g~~--~al~~~sG~~Ai~~~l~all~--------------~Gd~Vl~~~~~~~~t~~~~~ 127 (403)
T PRK07810 68 GNPTVSMFEE----RLRLIEGAE--ACFATASGMSAVFTALGALLG--------------AGDRLVAARSLFGSCFVVCN 127 (403)
T ss_pred CCchHHHHHH----HHHHHhCCC--cEEEECChHHHHHHHHHHHhC--------------CCCEEEEccCCcchHHHHHH
Confidence 4555544544 478888864 688999999888776654321 33456666655532 33
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
+.+...|+ +++.++. .|+++|+++|.+ .+.+|.....++.+|.+-|+++|+++|+++|+++.| +
T Consensus 128 ~~~~~~G~---~v~~vd~-----~d~~~l~~ai~~------~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a 193 (403)
T PRK07810 128 EILPRWGV---ETVFVDG-----EDLSQWEEALSV------PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNV 193 (403)
T ss_pred HHHHHcCc---EEEEECC-----CCHHHHHHhcCc------CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECC
Confidence 45666787 8888874 388899888864 245677788899999999999999999999999999 7
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|+..... . +++.|+|.++.++||+++++-. .|+++.++ ..+..... .++.
T Consensus 194 ~a~~~~~-~-------------~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~---~~~~---------- 245 (403)
T PRK07810 194 FATPLLQ-R-------------GLPLGADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQ---KLMR---------- 245 (403)
T ss_pred CCccccC-C-------------hhhcCCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHH---HHHH----------
Confidence 6543321 1 1234699999999999987543 46666554 33322110 1111
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
..+.....+..|+.++ |.+-+..++++..+++.++.+.|++.|+++-+.
T Consensus 246 -------~~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~ 294 (403)
T PRK07810 246 -------HTGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWVR 294 (403)
T ss_pred -------HhCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEE
Confidence 0122345677777665 567788999999999999999999999886443
No 174
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.30 E-value=1.7e-09 Score=116.61 Aligned_cols=217 Identities=15% Similarity=0.166 Sum_probs=145.2
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH----
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK---- 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k---- 327 (629)
.|....+ .+.++++.|.+ ..++++.|+.++..+ .... .|...|+++...+.+...
T Consensus 49 ~p~~~~L----e~~lA~l~g~~--~~~~~~sG~aai~~~-~~~l--------------~~Gd~Viv~~~~y~~~~~~~~~ 107 (377)
T PRK07671 49 NPTRAAL----EELIAVLEGGH--AGFAFGSGMAAITAV-MMLF--------------SSGDHVILTDDVYGGTYRVMTK 107 (377)
T ss_pred ChHHHHH----HHHHHHHhCCC--ceEEeCCHHHHHHHH-HHHh--------------CCCCEEEECCCccchHHHHHHH
Confidence 4555444 44588888875 357777777654432 2211 133345666666653332
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++. .|+++|+++|.+ .+.+|.....++.+|.+.|+++|+++|+++|++++| +|
T Consensus 108 ~~~~~G~---~v~~v~~-----~d~~~l~~ai~~------~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~ 173 (377)
T PRK07671 108 VLNRFGI---EHTFVDT-----SNLEEVEEAIRP------NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTF 173 (377)
T ss_pred HHhcCCe---EEEEECC-----CCHHHHHHhcCC------CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCC
Confidence 3344576 7777763 388888888854 345777778889999999999999999999999999 77
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+..... .| +..|+|.++.+++|++++|.+ .|+++++++.+.......+ .+
T Consensus 174 ~~~~~~-~p-------------~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~-~~------------- 225 (377)
T PRK07671 174 MTPYWQ-SP-------------ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQ-NS------------- 225 (377)
T ss_pred CccccC-Ch-------------hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHH-Hh-------------
Confidence 543221 11 233699999999999998854 6777777655544332110 00
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.+-.......|+.++ |..-+..++++..+++..+.+.|+++|+++-+.
T Consensus 226 -------~g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~ 273 (377)
T PRK07671 226 -------TGGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKVY 273 (377)
T ss_pred -------hcCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEEE
Confidence 111234577777665 456677789999999999999999999876553
No 175
>PRK08363 alanine aminotransferase; Validated
Probab=99.29 E-value=2e-09 Score=117.10 Aligned_cols=313 Identities=14% Similarity=0.096 Sum_probs=184.0
Q ss_pred cChhHHHHHHHHHHHHHHHhC--CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVG--FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G--~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
..+....+.+.+.+++.+..| ++..+.++|+|+++++..++.+.. .|...|++..-++......
T Consensus 68 ~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~--------------~~gd~Vl~~~p~y~~~~~~ 133 (398)
T PRK08363 68 PSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALL--------------DPGDEILIPGPSYPPYTGL 133 (398)
T ss_pred CCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhC--------------CCCCEEEEcCCCCcchHHH
Confidence 344555666666666665545 444678999999998776655431 1344677778888888888
Q ss_pred HHHcCCCCCCEEEE-ecCCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE
Q psy1785 329 AAFEGLGSDNVYLI-KTDAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV 403 (629)
Q Consensus 329 a~~lGlg~~~v~~V-~~d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV 403 (629)
+...|. .++.+ +.+++ +.+|++.|++.+.. .+.+|+.+..++.+|.+-+ +++|.++|+++++++++
T Consensus 134 ~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~ 204 (398)
T PRK08363 134 VKFYGG---VPVEYRTIEEEGWQPDIDDIRKKITE------KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVIS 204 (398)
T ss_pred HHHcCC---EEEEeccccccCCcCCHHHHHhhCCc------ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEE
Confidence 888887 77777 55554 47999999887743 2445666788889998866 88899999999999999
Q ss_pred --ecCccccccccccccccccccccccCCcc-eEEEeCCCCCCC-CCCccEEEEEe-ccchhhhhhcCCCCccccCCcCC
Q psy1785 404 --TWNPHKLLTAPQQCSVFLTRRNYVIEVVA-DSVTWNPHKLLT-APQQCSVFLTR-HQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 404 --A~gg~~l~~~~~~~~~~l~~~~~~i~~ga-Dsv~~~~HK~l~-~P~~~g~ll~r-~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
+|+...+-..+ .+ ... +.... -.++.++.|+++ ....+|.+++. ++..+.........+. ..
T Consensus 205 Deay~~~~~~~~~--~~----~~~--~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~-~~---- 271 (398)
T PRK08363 205 DEIYDLMTYEGKH--VS----PGS--LTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLA-RI---- 271 (398)
T ss_pred hhhhhhhccCCcc--cC----HHH--cCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHh-cc----
Confidence 77654321110 00 000 11101 244679999954 45668988873 3333222111000000 00
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLR 558 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~ 558 (629)
.+ +........+..++.. ..+-+++..++..+..+++.+.|++++++++. .|..+.+.+-..|...
T Consensus 272 ---------~~-~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~--~p~g~~~~~~~l~~~~- 337 (398)
T PRK08363 272 ---------RL-CPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTT--KPQGAFYIFPRIEEGP- 337 (398)
T ss_pred ---------cc-cCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec--CCCeEEEEEEEeccCC-
Confidence 00 1111111222222321 24556677777778888899999988888753 4666555442222210
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..+. . ..+.+.|.++|........... ..+++|+++. .++++++..++.|+++.+
T Consensus 338 -~~~~----~------~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 338 -WKDD----K------EFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL---PPVEILEEAMDRFEEFMR 393 (398)
T ss_pred -CCCH----H------HHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 0000 0 1224456778865443332221 1358999995 358888888888877654
No 176
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.29 E-value=1.6e-09 Score=116.88 Aligned_cols=218 Identities=15% Similarity=0.155 Sum_probs=144.0
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH----H
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI----K 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si----~ 326 (629)
..|....+|+ .++++.|.+ ..+++++|+.++.. +.... .|...|+++...+... .
T Consensus 48 ~~p~~~~Le~----~la~l~g~~--~al~~~SG~~Al~~-~l~~l--------------~pGd~Vi~~~~~y~~t~~~~~ 106 (380)
T PRK06176 48 GNPTRFALEE----LIADLEGGV--KGFAFASGLAGIHA-VFSLF--------------QSGDHVLLGDDVYGGTFRLFD 106 (380)
T ss_pred CChhHHHHHH----HHHHHhCCC--CEEEECCHHHHHHH-HHHHc--------------CCCCEEEEcCCChhHHHHHHH
Confidence 3455555554 478888864 35777777776543 32221 1334456666555433 3
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
+.+...|+ +++.++. .|+++|++++.+ .+.+|.+...++.+|.+-|+++|.++|+++|+++.| +
T Consensus 107 ~~~~~~gi---~v~~vd~-----~d~e~l~~ai~~------~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t 172 (380)
T PRK06176 107 KVLVKNGL---SCTIIDT-----SDLSQIKKAIKP------NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNT 172 (380)
T ss_pred HHHHhcCe---EEEEcCC-----CCHHHHHHhcCc------CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECC
Confidence 34556677 7777764 378888887753 355677778889999999999999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|+... ...| ++.|+|.++.++||++++|.. .|++.++++.+..+... +..
T Consensus 173 ~a~~~-~~~p-------------~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~-----~~~--------- 224 (380)
T PRK06176 173 FATPY-YQNP-------------LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAF-----FQN--------- 224 (380)
T ss_pred ccccc-cCCc-------------cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHH-----HHH---------
Confidence 65432 2121 234699999999999998864 66666666544332210 100
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
..+........|..++ |...+..++++..+.+..+.+.|+++|.++-+.
T Consensus 225 -------~~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~ 273 (380)
T PRK06176 225 -------AIGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVY 273 (380)
T ss_pred -------HhcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEE
Confidence 0111223445566554 667888899999999999999999999886553
No 177
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.28 E-value=2.2e-09 Score=114.71 Aligned_cols=285 Identities=12% Similarity=0.088 Sum_probs=180.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++.++.+..+.++|+|++++...++.+... |...|++..-++......++..|+ ++
T Consensus 63 ~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~~ 125 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFN--------------HDRPLLFPDITYSFYPVYAGLYGI---PY 125 (353)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEeCCCHHHHHHHHHHcCC---EE
Confidence 4667778888888878899999999987766554322 334466666666566667888998 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc-CCeEEE--ecCcccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY-DMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~-~~~lhV--A~gg~~l~~~~~~ 416 (629)
+.+|.++++.+|+++|++. ...|+.+...+.+|.+-|.+++.++++.+ ++++++ +|..+. ..+
T Consensus 126 ~~v~~~~~~~~d~~~l~~~----------~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~--~~~-- 191 (353)
T PRK05387 126 EEIPLDDDFSIDVEDYLRP----------NGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFG--GES-- 191 (353)
T ss_pred EEeecCCCCCCCHHHHHhc----------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccC--Ccc--
Confidence 9999988899999988631 12467778899999999999999999886 888888 664321 110
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
....+. ... -..++.++.|.++.| .-+|.++. ++.+..........+ ..+ ..
T Consensus 192 ~~~~~~-----~~~-~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~~l~~~~~~~--------------~~~------~~ 244 (353)
T PRK05387 192 AIPLID-----RYP-NLLVVQTFSKSRSLAGLRVGFAIG-HPELIEALNRVKNSF--------------NSY------PL 244 (353)
T ss_pred hHHHHh-----hCC-CEEEEEehhHhhcchhhhceeeec-CHHHHHHHHHhhccC--------------CCC------Cc
Confidence 000001 111 357888999998755 44677765 444443321111000 000 01
Q ss_pred chHHHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHH
Q psy1785 496 DVLKFWFMWKAKG-TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVA 574 (629)
Q Consensus 496 ~al~~w~~l~~~G-~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~ 574 (629)
..+..+.+...+. .+.+++..++..+..+++.+.|++. |+++. ++..+.+.++. + ... .
T Consensus 245 ~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~-~-~~~---------------~ 304 (353)
T PRK05387 245 DRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL--PSKANFVFARH-P-SHD---------------A 304 (353)
T ss_pred CHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC--CCcCcEEEEEC-C-CCC---------------H
Confidence 1223333333332 3446677788888899999999987 88753 33333333322 1 110 1
Q ss_pred HHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 575 PKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 575 ~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.++.++|.++|..+..+. ..+..+++|++++ +.++++++++.|+++..
T Consensus 305 ~~~~~~l~~~gi~v~~~~-~~~~~~~iRis~~----~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 305 AELAAKLRERGIIVRHFN-KPRIDQFLRITIG----TDEEMEALVDALKEILA 352 (353)
T ss_pred HHHHHHHHHCCEEEEECC-CCCCCCeEEEEeC----CHHHHHHHHHHHHHHhh
Confidence 256677888886543221 1222468999985 56999999999998754
No 178
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.28 E-value=1.9e-09 Score=115.83 Aligned_cols=290 Identities=11% Similarity=0.050 Sum_probs=180.5
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+..+.++++|++++....+.+. . .+...|++...++......+...|. ++
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l-~-------------~~gd~vl~~~p~y~~~~~~~~~~g~---~~ 132 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAY-L-------------GPGDEVIYSEHGFAVYPIAAQAVGA---KP 132 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHh-c-------------CCCCEEEEecCCHHHHHHHHHHcCC---eE
Confidence 35666788888887677888888887644333221 1 1333466666666666666778888 89
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--CCeEEE--ecCccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--DMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~~~lhV--A~gg~~l~~~~~ 415 (629)
+.+|. +++.+|+++|++.+.+ .+.+|+.+...+.+|.+-|++++.++++.+ ++++++ +|.....-.. .
T Consensus 133 ~~~~~-~~~~~~~~~l~~~~~~------~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~-~ 204 (367)
T PRK02731 133 VEVPA-KDYGHDLDAMLAAVTP------RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKD-Y 204 (367)
T ss_pred EEecc-cCCCCCHHHHHHHhCC------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcC-c
Confidence 99998 4578999999988752 345666778899999999999999999875 889888 6654332111 0
Q ss_pred cccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
..+. .. +.... -..++.+.-|.++.| ..+|.++..+ +..+........ + .
T Consensus 205 ~~~~--~~--~~~~~-~~i~~~S~SK~~g~~G~RiG~l~~~~-~~~~~l~~~~~~-----------------~--~---- 255 (367)
T PRK02731 205 EDGL--EL--VAKFP-NVVVTRTFSKAYGLAGLRVGYGIAPP-EIIDALNRVRQP-----------------F--N---- 255 (367)
T ss_pred ccHH--HH--HhhcC-CEEEEeeehHhhcCcccceeeeeCCH-HHHHHHHHccCC-----------------C--C----
Confidence 0000 00 00111 235566778988644 4578887654 444332111000 0 0
Q ss_pred cchHHHHHHHHhcChh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhH
Q psy1785 495 PDVLKFWFMWKAKGTD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKV 573 (629)
Q Consensus 495 ~~al~~w~~l~~~G~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~ 573 (629)
...+..+++...+... .+++..++..++.+++.+.|++. |+++. ++..+.+.+++ |....
T Consensus 256 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~g~~~~i~~-~~~~~--------------- 316 (367)
T PRK02731 256 VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI--PSVGNFILVDF-DDGKD--------------- 316 (367)
T ss_pred CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC--CCCceEEEEEC-CCCCC---------------
Confidence 1234444555554433 35666667777888899999887 77654 34555555654 21110
Q ss_pred HHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 574 APKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 574 ~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..++.+.|.++|..+...... +..+++|++++ +.++++.++++|+++.+
T Consensus 317 ~~~~~~~L~~~gI~v~~~~~~-~~~~~iRis~~----~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 317 AAEAYQALLKRGVIVRPVAGY-GLPNALRITIG----TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHHHHHCCEEEEeCCCC-CCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence 135677888888654332222 22368999985 68999999999988754
No 179
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.28 E-value=8e-10 Score=118.35 Aligned_cols=307 Identities=13% Similarity=0.175 Sum_probs=190.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC--CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG--GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~--~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|....+...+++.+.+++.+--|++. ...+++.+|+.+++..+...... .+...|++..-+|..+.
T Consensus 40 Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~------------~~~~~vlv~~P~y~~~~ 107 (363)
T PF00155_consen 40 YPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKI------------NPGDTVLVPDPCYPSYI 107 (363)
T ss_dssp STCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHS------------STTSEEEEEESSSTHHH
T ss_pred CCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccc------------cccccceecCCcccccc
Confidence 44444555666666555554444443 31455555666555555544421 14456778888999999
Q ss_pred HHHHHcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHH---HHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADI---CAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i---~~~~~~~l 401 (629)
.+++..|+ .++.+|.+ .++.+|+++|++.+++...++..+.+|+.+...+.+|..-+.+++.++ |+++++++
T Consensus 108 ~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~i 184 (363)
T PF00155_consen 108 EAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIII 184 (363)
T ss_dssp HHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEE
T ss_pred ccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccce
Confidence 99999999 89999965 678999999999999876655335566677778889988665555555 99999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcc-eEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVA-DSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~ga-Dsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
.+ +|+....-.. +... . .. .++.+. -.++.++.|.++.| .-.|.+.+ ++.+..........+
T Consensus 185 i~De~y~~~~~~~~--~~~~--~-~~-~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~------- 250 (363)
T PF00155_consen 185 IVDEAYSDLIFGDP--DFGP--I-RS-LLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSG------- 250 (363)
T ss_dssp EEEETTTTGBSSSS--HTHH--H-HG-HHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHT-------
T ss_pred eeeeceeccccCCC--ccCc--c-cc-cccccccceeeeeccccccccccccccccc-hhhhhhhhhhccccc-------
Confidence 99 7776554321 0000 0 00 122223 48899999999876 34688887 544444321111010
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcCh-----hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEe
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGT-----DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWY 552 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~-----~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~ 552 (629)
+. ......++...+.. +-+++..++..+..+++.+.|++. ++.+.. +..+.+++..
T Consensus 251 -------------~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~--~~~~~~~~~~ 311 (363)
T PF00155_consen 251 -------------LS---SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLP--PEAGFFLWVR 311 (363)
T ss_dssp -------------TS---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEH--HSBSSEEEEE
T ss_pred -------------cc---cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheee--ccCccEEEEE
Confidence 11 11122222222222 255677888888999999999988 999875 4455554432
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhc-CcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHH
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKS-GSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEI 622 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i 622 (629)
.+. . ...++.+.|.++ |..+..+... +..+++|+++ ...++++++.+++.|
T Consensus 312 ~~~---------~-------~~~~l~~~L~~~~gi~v~pg~~~-~~~~~iRi~~--a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 312 LDP---------N-------DAEELAQELLEEYGILVRPGSYF-GVPGYIRISL--ASHSEEDLEEALERL 363 (363)
T ss_dssp ESH---------H-------HHHHHHHHHHHHHTEEEEEGGGG-TSTTEEEEEG--GCSCHHHHHHHHHHH
T ss_pred ccc---------c-------hHHHHHHHHHHhCCEEEEecCCC-CCCCEEEEEe--ccCCHHHHHHHHhhC
Confidence 211 0 123567778887 8665443322 2357999999 578999999998875
No 180
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.28 E-value=2e-09 Score=117.09 Aligned_cols=219 Identities=15% Similarity=0.165 Sum_probs=147.5
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH----H
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI----K 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si----~ 326 (629)
..|....+|+. ++++.|.+ ..+++++|+.++..++.+... |...|+++...|.+. .
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~--~~l~~~sG~~Ai~~al~~ll~--------------~Gd~Vl~~~~~y~~~~~~~~ 121 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGE--AAVVAASGMGAISSSLWSALK--------------AGDHVVASDTLYGCTFALLN 121 (400)
T ss_pred CCccHHHHHHH----HHHHhCCC--cEEEEcCHHHHHHHHHHHHhC--------------CCCEEEEecCccchHHHHHH
Confidence 45666555554 77777754 578899999887666543321 333566666666543 3
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--CCeEEE-
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--DMADSV- 403 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~~~lhV- 403 (629)
..+...|+ +++.++.+ |+++|+++|.+ .+.+|+....++.+|.+-|+++|.++|+++ ++++.|
T Consensus 122 ~~~~~~G~---~v~~vd~~-----d~e~l~~~i~~------~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD 187 (400)
T PRK06234 122 HGLTRYGV---EVTFVDTS-----NLEEVRNALKA------NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD 187 (400)
T ss_pred HHHhhCCe---EEEEECCC-----CHHHHHHHhcc------CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE
Confidence 44566777 88888753 78888888854 255777788899999999999999999997 899999
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
+|+......+ +..|+|.++.+++|+++++.. .|+++.++ ++.+........++
T Consensus 188 ea~~~~~~~~~--------------l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~~~l~~~~~~~~--------- 243 (400)
T PRK06234 188 NTFCTPYIQRP--------------LQLGADVVVHSATKYLNGHGDVIAGFVVGKE-EFINQVKLFGIKDM--------- 243 (400)
T ss_pred CCCCchhcCCc--------------hhhCCcEEEeeccccccCCCCceeEEEEecH-HHHHHHHHHHHHHh---------
Confidence 7765432211 233699999999999987753 46666554 44433211000000
Q ss_pred ccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 481 KYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 481 ~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
.+........|+.++ |.+-+..++++..+++.++.+.|+++|.++-+
T Consensus 244 ----------~g~~l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V 290 (400)
T PRK06234 244 ----------TGSVIGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKV 290 (400)
T ss_pred ----------cCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 111234566676665 44566788899999999999999999887544
No 181
>PRK07324 transaminase; Validated
Probab=99.27 E-value=5.1e-09 Score=112.87 Aligned_cols=291 Identities=12% Similarity=0.109 Sum_probs=172.7
Q ss_pred HHHHHHHHh-CCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEE
Q psy1785 262 VLAQMRTIV-GFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVY 340 (629)
Q Consensus 262 ~~~~l~~l~-G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~ 340 (629)
..+.+++++ +.+..+.++|+|+++++..++.+... |...|++..-++.+....++..|. +++
T Consensus 67 lr~~ia~~~~~~~~~~vi~t~G~~~al~~~~~~l~~--------------~gd~Vl~~~P~y~~~~~~~~~~g~---~v~ 129 (373)
T PRK07324 67 FKEAVASLYQNVKPENILQTNGATGANFLVLYALVE--------------PGDHVISVYPTYQQLYDIPESLGA---EVD 129 (373)
T ss_pred HHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCC--------------CCCEEEEcCCCchhHHHHHHHcCC---EEE
Confidence 334455554 35567889999999998777654421 334466667777788888899998 999
Q ss_pred EEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 341 LIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 341 ~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
.+|++.+ ..+|+++|++.+.. .+.+|+.+..++.+|.+-+ +.+|.++|+++++++++ +|.....- .
T Consensus 130 ~v~~~~~~~~~~d~~~l~~~~~~------~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~-~ 202 (373)
T PRK07324 130 YWQLKEENGWLPDLDELRRLVRP------NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDED-G 202 (373)
T ss_pred EEecccccCCCCCHHHHHHhCCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccC-C
Confidence 9999753 36899999877643 2446778888999998877 88999999999999999 77553221 1
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
. ...+... .+. ...+.++.|.++.| .-+|.++. ++.++....... .+. + .+.
T Consensus 203 ~--~~s~~~~----~~~--~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~~~~~~-~~~----------------~-~~~ 255 (373)
T PRK07324 203 S--TPSIADL----YEK--GISTNSMSKTYSLPGIRVGWIAA-NEEVIDILRKYR-DYT----------------M-ICA 255 (373)
T ss_pred C--CCChhhc----cCC--EEEEecchhhcCCccceeEEEec-CHHHHHHHHHHh-CcE----------------E-ecC
Confidence 0 0000010 112 25567889998855 33688776 444444322110 110 0 011
Q ss_pred CCcchHHHHHHHHhcC-hh-hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 493 RKPDVLKFWFMWKAKG-TD-GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 493 r~~~al~~w~~l~~~G-~~-G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
..+.-+++...+. .+ -+++..+...+..+.+.+.|++.++++.+. |.-+...|-..+.... .
T Consensus 256 ---~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~--p~gg~~~~i~~~~~~~----~------- 319 (373)
T PRK07324 256 ---GVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVK--PKAVSTSFVKLDVDMP----S------- 319 (373)
T ss_pred ---ChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEC--CCceEEEEEEeCCCCC----H-------
Confidence 1122223322222 12 233334444556777888888877887654 5544443332222111 1
Q ss_pred hhHHHHHHHHHH-hcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 571 HKVAPKIKERMM-KSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 571 ~~~~~~i~~~l~-~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.++.++|. +.|..+..+... +..+++|++++. +++.++.-++.|++..+
T Consensus 320 ----~~~~~~ll~~~gv~v~pg~~F-~~~~~iRis~~~---~~~~l~~~l~rl~~~l~ 369 (373)
T PRK07324 320 ----EDFCLKLLKETGVLLVPGNRF-DLEGHVRIGYCC---DTETLKKGLKKLSEFLR 369 (373)
T ss_pred ----HHHHHHHHHhcCEEEECcccc-CCCCeEEEEecC---CHHHHHHHHHHHHHHHH
Confidence 24555654 567655443333 234699999862 47777777777766543
No 182
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.27 E-value=2.8e-09 Score=115.64 Aligned_cols=219 Identities=15% Similarity=0.159 Sum_probs=147.8
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH---
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK--- 326 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~--- 326 (629)
...|....+|+ .++++.|.+ ..+++++|+.++..++.+... |...|+++...|.+..
T Consensus 61 ~~~p~~~~le~----~lA~l~g~~--~~i~~ssG~~Ai~~~l~all~--------------~GD~Vi~~~~~y~~~~~~~ 120 (398)
T PRK08249 61 NTNPTVQAFEE----KVRILEGAE--AATAFSTGMAAISNTLYTFLK--------------PGDRVVSIKDTYGGTNKIF 120 (398)
T ss_pred CCChHHHHHHH----HHHHHhCCC--eEEEeCChHHHHHHHHHHhcC--------------CCCEEEEcCCchHHHHHHH
Confidence 34565544444 578888864 467788888776666543321 3445777778887643
Q ss_pred -HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--
Q psy1785 327 -KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-- 403 (629)
Q Consensus 327 -kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-- 403 (629)
..+...|+ +++.++. .|+++++++|.+ .+.+|.....++.+|.+-|+++|.++|+++|++++|
T Consensus 121 ~~~~~~~Gi---~v~~vd~-----~d~e~l~~~i~~------~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~ 186 (398)
T PRK08249 121 TEFLPRMGV---DVTLCET-----GDHEQIEAEIAK------GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDN 186 (398)
T ss_pred HHHHhhCCe---EEEEcCC-----CCHHHHHHhcCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEEC
Confidence 33455676 6666542 688888888754 245677778889999999999999999999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
+|+..... . . +..++|.++.+++|+++++.. .|.+++.++++........ .
T Consensus 187 t~a~~~~~-~-----------~--l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-----~--------- 238 (398)
T PRK08249 187 TFATPINQ-N-----------P--LALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-----E--------- 238 (398)
T ss_pred CcCccccC-C-----------c--hhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-----H---------
Confidence 76643221 1 1 223699999999999987653 3344555555444321110 0
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
..+-....+..|+.++ |.+-+..++++..+++..+.+.|++.|.++-+
T Consensus 239 -------~~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V 286 (398)
T PRK08249 239 -------INGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEAV 286 (398)
T ss_pred -------hcCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 0122345667777666 56677888999999999999999999887644
No 183
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.27 E-value=2.8e-08 Score=108.25 Aligned_cols=306 Identities=13% Similarity=0.116 Sum_probs=173.6
Q ss_pred HHHHHHHHHhCC------CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC
Q psy1785 261 HVLAQMRTIVGF------QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL 334 (629)
Q Consensus 261 ~~~~~l~~l~G~------~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl 334 (629)
++++.+++++|. +..+.++|+|+|+++..++.+... +...|+++.-++..+...+...|+
T Consensus 77 ~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~--------------~gd~Vlv~~p~y~~~~~~~~~~g~ 142 (403)
T TIGR01265 77 AAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALAN--------------PGANILVPRPGFPLYDTRAAFSGL 142 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCC--------------CCCEEEEeCCCchhHHHHHHHcCC
Confidence 344455555552 335789999999998777665421 233466666777777788888898
Q ss_pred CCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 335 GSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 335 g~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~lhV--A~gg 407 (629)
+++.++.+. ++.+|++++++.+.. .+..|+.+..++.+|.+- ++++|.++|+++|+++++ +|..
T Consensus 143 ---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~ 213 (403)
T TIGR01265 143 ---EVRLYDLLPEKDWEIDLDGLEALADE------KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGH 213 (403)
T ss_pred ---EEEEecCCcccCCccCHHHHHHHhCc------CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccc
Confidence 888888753 468999999887743 244577777889999885 488999999999999999 6665
Q ss_pred cccccccccccccccccccccCCcc-eEEEeCCCCCCCCC-CccEEEEEecc-chhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVA-DSVTWNPHKLLTAP-QQCSVFLTRHQ-SVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~ga-Dsv~~~~HK~l~~P-~~~g~ll~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
...-..+. . .... +.... =.++.++.|.++.| .-+|.+.+.++ ..+...+......+.+
T Consensus 214 ~~~~~~~~--~---~~~~--~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~----------- 275 (403)
T TIGR01265 214 MVFGDAPF--I---PMAS--FASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ----------- 275 (403)
T ss_pred cccCCCCc--c---chhh--hccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhh-----------
Confidence 43211100 0 0111 11101 14567889986666 55888877542 2211100000000000
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC-CCCCch
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL-RGKEDQ 563 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~-~~~~~~ 563 (629)
.+. +........+-.++......-+++..++..+..+++.+.|++.+++++.. |.-+.+.+--.|... .+..+
T Consensus 276 --~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--p~~g~f~~~~~~~~~~~~~~~- 349 (403)
T TIGR01265 276 --RIL-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPK--PEGAMYLMVKLELELFPEIKD- 349 (403)
T ss_pred --hhc-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC--CCceeEEEEeccccccCCCCC-
Confidence 000 11111111111222222233455566777777888999999887886543 544443322122110 00000
Q ss_pred hhHHHHHhhHHHHHHHHH-HhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 564 ADFNELLHKVAPKIKERM-MKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~l-~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..++.+++ .+.|..+..+... +..+++|+++++ .++.++..++.|.++.+
T Consensus 350 ----------~~~~~~~l~~~~gv~v~pg~~f-~~~~~iRis~~~---~~~~l~~~l~~l~~~~~ 400 (403)
T TIGR01265 350 ----------DVDFCEKLVREESVICLPGSAF-GLPNWVRITITV---PESMLEEACSRIKEFCE 400 (403)
T ss_pred ----------HHHHHHHHHHhCCEEEeCcccc-CCCCeEEEEecC---CHHHHHHHHHHHHHHHH
Confidence 12455554 4567654433333 234699999973 46777777777776654
No 184
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.27 E-value=2.2e-09 Score=115.46 Aligned_cols=225 Identities=18% Similarity=0.159 Sum_probs=148.8
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHHHHHHcCCCC
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKKLAAFEGLGS 336 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~kaa~~lGlg~ 336 (629)
+..+.++++.|.+. .+++++|+.++..++ ... . |...|+++...+.+ +.+.+...|+
T Consensus 56 ~le~~la~l~g~~~--~~~~~sG~~ai~~~~-~ll-~-------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~-- 116 (366)
T PRK08247 56 VLEQAIADLEGGDQ--GFACSSGMAAIQLVM-SLF-R-------------SGDELIVSSDLYGGTYRLFEEHWKKWNV-- 116 (366)
T ss_pred HHHHHHHHHhCCCc--EEEEcCHHHHHHHHH-HHh-C-------------CCCEEEEecCCcCcHHHHHHHHhhccCc--
Confidence 33445889998864 588888887765433 221 1 22334555554443 3345566787
Q ss_pred CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 337 DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 337 ~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+++.++. .|+++|+++|.+ .+.+|.....++.+|.+.++++|.++|+++|+++.+ +|+......+
T Consensus 117 -~v~~vd~-----~d~~~l~~~i~~------~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~~p- 183 (366)
T PRK08247 117 -RFVYVNT-----ASLKAIEQAITP------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVLQRP- 183 (366)
T ss_pred -eEEEECC-----CCHHHHHHhccc------CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCccccccCc-
Confidence 8888874 488888888754 245677777788899999999999999999999999 7754322111
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
++.|+|.++.+++|+++++.+ .|++..+++.+........ .+ .+
T Consensus 184 -------------~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~-~~--------------------~g 229 (366)
T PRK08247 184 -------------LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQ-NA--------------------AG 229 (366)
T ss_pred -------------hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHH-Hh--------------------cC
Confidence 233699999999999997644 5666555444433321100 00 01
Q ss_pred CCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee
Q psy1785 493 RKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~ 553 (629)
.....+..|+.++ |.+-+..++++..+++..+.+.|+++|++..+..++.-+.++|.+.
T Consensus 230 ~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 230 AVLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred CCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 1123345666666 4456777888889999999999999999886551347788899763
No 185
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.26 E-value=8.2e-10 Score=118.38 Aligned_cols=231 Identities=18% Similarity=0.126 Sum_probs=152.1
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA 330 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~ 330 (629)
..|....+|+. ++++.|. ..++.++||++++..++. +. + |...|+++...+-.......
T Consensus 52 ~~p~~~~le~~----lA~leg~--~~~v~~~sG~aAi~~~l~-~l-~-------------~GD~VI~~~~~yg~~~~~~~ 110 (364)
T PRK07269 52 KNPTRAKLEET----LAAIESA--DYALATSSGMSAIVLAFS-VF-P-------------VGSKVVAVRDLYGGSFRWFN 110 (364)
T ss_pred CCccHHHHHHH----HHHHhCC--CeEEEeCCHHHHHHHHHH-Hh-C-------------CCCEEEEecCCcCchHHHHH
Confidence 45666666555 6677664 468889999998776663 22 1 22233444333222112111
Q ss_pred -HcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 331 -FEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 331 -~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
...-+ .+. + +..+|+++++++|.+ .+.+|.....++.+|.+-|+++|+++|+++|+++.| +|..
T Consensus 111 ~~~~~~--~~~-~----~~~~d~~~l~~~i~~------~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~ 177 (364)
T PRK07269 111 QQEKEG--RFH-F----TYANTEEELIAAIEE------DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS 177 (364)
T ss_pred HHHhcC--cEE-E----EecCCHHHHHHhcCc------CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc
Confidence 11110 111 1 123588888888854 355788888999999999999999999999999999 7654
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCC
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSG 485 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 485 (629)
.... .| ++.|+|.++.++||+++++-. .|++.++++++.++... ...
T Consensus 178 ~~~~-~p-------------l~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-----~~~------------ 226 (364)
T PRK07269 178 PIYQ-RP-------------IELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-----NLN------------ 226 (364)
T ss_pred cccC-Cc-------------hhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH-----HHH------------
Confidence 3321 21 344799999999999998776 67777766655443321 000
Q ss_pred CccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcE-EEccCCCceEEEEEee
Q psy1785 486 DKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFK-LVLDEPECTNISFWYI 553 (629)
Q Consensus 486 ~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~-l~~~~p~~~~v~F~~~ 553 (629)
..|.....+..|+.++. .+-+..++++..+++.++.+.|++.|+++ ++. ++..+.++|.+.
T Consensus 227 ----~~G~~~s~~~a~l~~~~--L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~y-pg~gg~~sf~~~ 288 (364)
T PRK07269 227 ----TTGAVLSPFDSYLLMRG--LKTLSLRMERSTANAQEVVAFLKKSPAVKEVLY-TGKGGMISFKVA 288 (364)
T ss_pred ----HhCCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeC-CCcCcEEEEEEC
Confidence 01223467788877764 45689999999999999999999999864 444 566788899864
No 186
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.26 E-value=3.9e-09 Score=115.08 Aligned_cols=318 Identities=15% Similarity=0.182 Sum_probs=178.2
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH-HH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI-KK 327 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si-~k 327 (629)
|..++....+|+. +++++|.+ ..++|+|||.++..++.+... |..+| . ...||.. ..
T Consensus 49 Y~~~~g~~~Leea----ia~~~g~~--~vv~t~~Gt~Al~la~~al~~--------------pGD~V-~-~~~~f~~~~~ 106 (431)
T cd00617 49 YAGSKSFYDLEDA----VQDLFGFK--HIIPTHQGRGAENILFSILLK--------------PGRTV-P-SNMHFDTTRG 106 (431)
T ss_pred cCCCCCHHHHHHH----HHHHHCCC--eEEEcCCHHHHHHHHHHHhCC--------------CCCEE-c-cCCcccchHH
Confidence 6667777667666 56667775 689999999999877654321 33344 2 4567753 34
Q ss_pred HHHHcCCCCCCEEEEecCC----------CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcc-ccc---cCHHHHHHH
Q psy1785 328 LAAFEGLGSDNVYLIKTDA----------RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVL-GAF---DPIPAIADI 393 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~----------~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~-G~i---dpl~ei~~i 393 (629)
.....|. .++.+++++ .|.+|+++|+++|.+... ..+.+|+.+..++.+ |.+ ++|++|+++
T Consensus 107 ~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~~l~~i~ei 181 (431)
T cd00617 107 HIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMANLREVREL 181 (431)
T ss_pred HHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHHHHHHHHHH
Confidence 5667787 888888863 355999999999974210 124456665555554 555 467788999
Q ss_pred HHHcCCeEEE--e--cCcccccc----cc-ccccccccccccc---cCCcceEEEeCCCCCCCCCCccEEEEEeccchhh
Q psy1785 394 CAEYDMADSV--T--WNPHKLLT----AP-QQCSVFLTRRNYV---IEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLT 461 (629)
Q Consensus 394 ~~~~~~~lhV--A--~gg~~l~~----~~-~~~~~~l~~~~~~---i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~ 461 (629)
|++||++++. | ++. .++. +. ...+ ..... ... +|++++++||-+++|. .|++..+++++..
T Consensus 182 a~~~gi~li~DaAr~~~n-a~~i~~r~~g~~~~s----i~ei~~e~~s~-sd~~~mS~~K~~~~~~-GG~i~~~d~~l~~ 254 (431)
T cd00617 182 AHKYGIPVVLDAARFAEN-AYFIKEREEGYRDKS----IAEIAREMFSY-ADGCTMSAKKDGLVNI-GGFLALRDDELYE 254 (431)
T ss_pred HHHcCCEEEEEchhhHhh-hhhhhcccccccCCC----HHHHHHHhhcc-CCEEEEEeecCCCCcc-ceEEEeCcHHHHH
Confidence 9999999999 3 221 1111 00 0000 00000 124 9999999999998886 3566666655665
Q ss_pred hhhcCCCCccccCCcCCCcccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 462 ECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 462 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
++.+ +..... +...+ ++-.. ...++-.++... .+ .+.+++.++.+++|.+.|.+. |+.++.
T Consensus 255 ~~~~----~~~~~~----~~~~~------gG~~~r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~-G~~v~~ 316 (431)
T cd00617 255 EARQ----RVVLYE----GFVTY------GGMAGRDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEA-GVPIVE 316 (431)
T ss_pred HHHH----hccccC----Ccccc------ccccHHHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHC-CCCccC
Confidence 5432 111100 00011 11111 111111122211 11 345666677789999999998 998764
Q ss_pred cCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHH-HhcCcEEE-------eeeecCC-----ccceEEEeecC
Q psy1785 541 DEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERM-MKSGSMMI-------TYQPIHA-----LPNFFRLVLQN 607 (629)
Q Consensus 541 ~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~G~~~i-------~~~~~~~-----~~~~lR~~~~n 607 (629)
|.-+..+|--.+.-+.... ..++. ..++...| .+.|...+ ...+..+ ....+|+.+--
T Consensus 317 --P~Ggh~v~~d~~~~~~~~~-~~~~~------~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~pr 387 (431)
T cd00617 317 --PAGGHAVFIDAREFLPHIP-QEQFP------AQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPR 387 (431)
T ss_pred --CCcceEEEEEhHHhcCCCC-cccCc------HHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccc
Confidence 5444333321111000000 00000 11333333 33443322 2222112 23689999954
Q ss_pred CCCCHHHHHHHHHHHHHHhh
Q psy1785 608 SALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 608 ~~~t~edid~l~~~i~~l~~ 627 (629)
..-|.+|+|++.+.|.++.+
T Consensus 388 r~~t~~~~~~~~~~~~~~~~ 407 (431)
T cd00617 388 RVYTQDHMDYVAAAVIALYE 407 (431)
T ss_pred cccCHHHHHHHHHHHHHHHh
Confidence 45799999999999988764
No 187
>PRK07682 hypothetical protein; Validated
Probab=99.26 E-value=5.7e-09 Score=112.65 Aligned_cols=308 Identities=13% Similarity=0.117 Sum_probs=187.9
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--C-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--G-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|...+....+.+.+.+++.+.+|++ . .+.++|+|+++++..++.+.. .|...|++..-++..+
T Consensus 53 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~--------------~~gd~vl~~~p~y~~~ 118 (378)
T PRK07682 53 YTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAII--------------NPGDEVLIVEPSFVSY 118 (378)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhC--------------CCCCEEEEeCCCchhh
Confidence 4334555666677777787776764 2 368999999998766554321 1344566777778888
Q ss_pred HHHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCe
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMA 400 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~ 400 (629)
..++...|. .++.++.+. ++.+|+++|++++.+ .+.+|+.+...+.+|.+- .+++|.++|++++++
T Consensus 119 ~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ 189 (378)
T PRK07682 119 APLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITA------KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLI 189 (378)
T ss_pred HHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCc------ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcE
Confidence 888888887 888898753 568999999988754 244565666788888875 488899999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+++ +|.....-..+..+. ... +... -..+..++.|.++.| +-+|.++..+ ++........ .+.
T Consensus 190 ii~De~y~~~~~~~~~~~~~---~~~--~~~~-~~i~~~S~SK~~~~~GlR~G~~~~~~-~~i~~l~~~~-~~~------ 255 (378)
T PRK07682 190 VLSDEIYAELTYDEAYTSFA---SIK--GMRE-RTILISGFSKGFAMTGWRLGFIAAPV-YFSEAMLKIH-QYS------ 255 (378)
T ss_pred EEEehhhhhcccCCCCCChh---hcc--cccC-CEEEEecCcccccChhhhhhhhhcCH-HHHHHHHHHH-Hhh------
Confidence 999 666543211100011 111 1112 357788899999854 3478887744 3443321110 000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee-C
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAK--GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI-P 554 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~-p 554 (629)
..+. ..+...++..++ |...+++..++..+.++++.+.|++. |+++. .|..+.+.+... +
T Consensus 256 -----------~~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~--~p~g~~~~~~~~~~ 318 (378)
T PRK07682 256 -----------MMCA---PTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH--VPGGAFYAFPSISS 318 (378)
T ss_pred -----------ccCC---CHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC--CCCeeEEEEEeccC
Confidence 0011 122222222332 33446666777788889999999987 88754 455544433211 2
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.... ..++.+.+. +.|..+..+.... ....++|++++ . ++++++..++.|+++.+.
T Consensus 319 ~~~~---------------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~-~--~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 319 TGLS---------------SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA-T--SLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred CCCC---------------HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC-C--CHHHHHHHHHHHHHHHhh
Confidence 1111 024555654 5676543322221 12368999996 2 589999999999887653
No 188
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.26 E-value=3.8e-09 Score=113.16 Aligned_cols=287 Identities=7% Similarity=0.031 Sum_probs=173.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++++.+++.+|.+..+..+++|++++...++.+ . . |..+++.+ -+...+...++..|. ++
T Consensus 58 ~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~-l-~-------------~g~viv~~-P~y~~~~~~~~~~g~---~~ 118 (356)
T PRK08056 58 RHLHQALARHHQVPASWILAGNGETESIFAVVSG-L-K-------------PRRAMIVT-PGFAEYRRALQQVGC---EI 118 (356)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH-h-C-------------CCCEEEeC-CCcHHHHHHHHHcCC---eE
Confidence 5667788888998888889999988876555442 2 1 22234433 223345567888898 99
Q ss_pred EEEecCCC-C-CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCcccccc
Q psy1785 340 YLIKTDAR-G-RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLT 412 (629)
Q Consensus 340 ~~V~~d~~-g-~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~ 412 (629)
+.+|.+++ + .+| +++++.+. ..+.+|+.+...+.+|.+-+ +.+|.++|+++++++.+ +|.....-.
T Consensus 119 ~~v~~~~~~~~~~~-~~~~~~~~------~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~ 191 (356)
T PRK08056 119 RRYSLREADGWQLT-DAILEALT------PDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE 191 (356)
T ss_pred EEEecccccCCCcc-HHHHHhcc------CCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc
Confidence 99998754 3 444 33444332 12445667888999999988 78889999999999999 775533111
Q ss_pred ccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCC
Q psy1785 413 APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 491 (629)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 491 (629)
. .+-.. ... . .-..++.+++|+++.| .-+|.++..++..+..... +. .. +
T Consensus 192 ~--~~~~~--~~~--~--~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~----~~--~~-----------~---- 242 (356)
T PRK08056 192 T--GFIPQ--LAD--N--PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRR----QQ--MP-----------W---- 242 (356)
T ss_pred h--HHHHH--hcc--C--CCEEEEEechhhccCcchhheeeecCCHHHHHHHHH----hC--CC-----------C----
Confidence 0 00000 011 1 1467889999999954 5588887755444333211 00 00 0
Q ss_pred CCCcchHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 492 GRKPDVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 492 sr~~~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
....+...++...+ +.+-+++..++..+..+++.+.|++++++++. ++..+-+.+++ +..
T Consensus 243 --~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~~~~~~~~~-~~~-------------- 303 (356)
T PRK08056 243 --SINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW--PGRANYLFLRC-ERP-------------- 303 (356)
T ss_pred --chhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc--CCCCcEEEEEc-CCC--------------
Confidence 01112223333333 22334455566677888899999988888754 34433322222 110
Q ss_pred hhHHHHHHHHHHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 571 HKVAPKIKERMMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 571 ~~~~~~i~~~l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..++.+.|.+.|..+.......+ ..+++|+++. +.++.+.|+++|+++.+
T Consensus 304 ---~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 304 ---DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVLT 354 (356)
T ss_pred ---hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHHc
Confidence 02466778888865444333322 2358999996 67999999999988754
No 189
>PRK08912 hypothetical protein; Provisional
Probab=99.25 E-value=1.5e-08 Score=109.76 Aligned_cols=310 Identities=13% Similarity=0.124 Sum_probs=183.6
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|........+.+.+.+++.+..|++ .. +.++|+|++++...++.... .|...|++..-+|..+
T Consensus 59 Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~--------------~~gd~Vlv~~p~y~~~ 124 (387)
T PRK08912 59 YPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALV--------------EPGDEVVLFQPLYDAY 124 (387)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhc--------------CCCCEEEEeCCCchhh
Confidence 3333344556666677777766764 34 78899999998654544321 1334577777888889
Q ss_pred HHHHHHcCCCCCCEEEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMAD 401 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~l 401 (629)
..+++..|. +++.+|+++ ++.+|+++|++.+.. .+.+|+.+...+.+|.+-+ +++|.++|+++++++
T Consensus 125 ~~~~~~~g~---~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~i 195 (387)
T PRK08912 125 LPLIRRAGG---VPRLVRLEPPHWRLPRAALAAAFSP------RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVA 195 (387)
T ss_pred HHHHHHcCC---EEEEEecCcccCcCCHHHHHHHhCc------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEE
Confidence 899999998 999999975 578999999987743 2445666788899998866 677888999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
++ +|+...+-..+ ...+.... +... -+.++.++.|.++.| .-+|+++... ............+.
T Consensus 196 i~De~y~~~~~~~~~--~~~~~~~~--~~~~-~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~~~l~~~~~~~~------- 262 (387)
T PRK08912 196 ICDEVWEHVVFDGRR--HIPLMTLP--GMRE-RTVKIGSAGKIFSLTGWKVGFVCAAP-PLLRVLAKAHQFLT------- 262 (387)
T ss_pred EEhhhhhhcccCCCC--CcChhhCC--CccC-ceEEEeechhhccCcCceeEEEecCH-HHHHHHHHHHhhcc-------
Confidence 99 76543221100 00000110 1222 578899999999854 3478877644 34433211100000
Q ss_pred CcccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEE-EEEeeCCC
Q psy1785 479 DTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNI-SFWYIPPS 556 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v-~F~~~p~~ 556 (629)
...+... .++.. .+. ...+-+++..++..+..+++.+.|++. |+++. +|..+.+ .+++.+.+
T Consensus 263 ----------~~~~~~~q~~~~~--~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~g~~~l~~~l~~~~ 326 (387)
T PRK08912 263 ----------FTTPPNLQAAVAY--GLG-KPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL--PSQGTYFLTVDLAPLG 326 (387)
T ss_pred ----------ccCChHHHHHHHH--HHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CCCcceEEEecccccC
Confidence 0011111 11111 111 112334556666777888899999887 77754 3444332 22332211
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeec---CCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPI---HALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~---~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.. . + ..++.+++. +.|......... ....+++|++++. .+++++..++.|+++.
T Consensus 327 ~~-~-~-----------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l 384 (387)
T PRK08912 327 LA-E-D-----------DVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAAR 384 (387)
T ss_pred CC-C-C-----------HHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHH
Confidence 10 0 0 024566664 567654433222 1223699999973 3788888888777654
No 190
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.25 E-value=3.9e-09 Score=115.03 Aligned_cols=237 Identities=12% Similarity=0.085 Sum_probs=153.3
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH---
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL--- 328 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka--- 328 (629)
.|....+|+. ++++.|.. .++.+++|+.|+..++.+... |...|+++..++.+....
T Consensus 60 nPtv~~lE~~----la~leg~~--~av~~~SG~aAi~~al~all~--------------~GD~VI~~~~~Y~~T~~~~~~ 119 (432)
T PRK06702 60 NPTLAAFEQK----LAELEGGV--GAVATASGQAAIMLAVLNICS--------------SGDHLLCSSTVYGGTFNLFGV 119 (432)
T ss_pred CcHHHHHHHH----HHHHhCCC--cEEEECCHHHHHHHHHHHhcC--------------CCCEEEECCCchHHHHHHHHH
Confidence 5777666665 67777654 478899999998888765421 344677777766544443
Q ss_pred -HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 329 -AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 329 -a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
...+|+ ++..+.. .+|++.|+++|.+ .+.+|.+...++.++.+-|+++|+++|+++|+++.+ +|
T Consensus 120 ~l~~~Gi---~v~~vd~----~~d~~~l~~~I~~------~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~ 186 (432)
T PRK06702 120 SLRKLGI---DVTFFNP----NLTADEIVALAND------KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTL 186 (432)
T ss_pred HHHHCCC---EEEEECC----CCCHHHHHHhCCc------CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCC
Confidence 566787 7877743 5799999998865 345677777889999999999999999999999999 77
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEecc-chhhhhhcCCCCccccCCcCCCcc-
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQ-SVLTECHSASASYLFQKDKFYDTK- 481 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~-~~l~~~~~~~~~yl~~~~~~~~~~- 481 (629)
+...+ ..| ++.|||.++-+..|+++.+-. .|++..... .+... .....+......+...
T Consensus 187 ~tP~~-~~p-------------l~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~---~~~~l~~~~~~~~~~~~ 249 (432)
T PRK06702 187 ATPYL-CQA-------------FEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNG---KYPELVEPDPSYHGVSY 249 (432)
T ss_pred Cchhh-CCh-------------hhcCCCEEEEccccccCCCcceeceEEEeCCCcccccc---cccccccccccccccch
Confidence 53322 221 455899999999999988644 333332221 11100 0000110000000000
Q ss_pred -cCCC----------CccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 482 -YDSG----------DKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 482 -~~~~----------~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.+.+ ......+-....+..|+.++ |.+-+..++++..+++.++.+.|++.|.++-+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~ 317 (432)
T PRK06702 250 VQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVN 317 (432)
T ss_pred hhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEE
Confidence 0000 00001222446778887776 456788999999999999999999999887553
No 191
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.24 E-value=1.6e-08 Score=108.10 Aligned_cols=305 Identities=12% Similarity=0.095 Sum_probs=180.0
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|........+.+.+.+++.+..|++ .. +.++|+|++++...++...... | .+...|++..-++...
T Consensus 32 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~--------g---~~~d~Vl~~~p~y~~~ 100 (350)
T TIGR03537 32 YPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDP--------E---EDRRRVIFGTPGYPVY 100 (350)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCC--------C---CCCceEEEcCCCCcch
Confidence 4333344566677777777777754 34 7899999999876654433211 1 0113567777788888
Q ss_pred HHHHHHcCCCCCCEEEEecCC-CC-CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCe
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDA-RG-RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMA 400 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~-~g-~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~ 400 (629)
..+++..|. +++.|+.++ +| .+|+++|++++.+ .+.+|..+..++.+|.+-| +++|.++|++++++
T Consensus 101 ~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ 171 (350)
T TIGR03537 101 ERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILE------ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGII 171 (350)
T ss_pred HHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhh------ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcE
Confidence 899999999 999999973 33 5899999998865 2445666778899998877 88888999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+.+ +|+....-.++ . .... ....-..+..++.|.++.|- -.|++. .++.+..........+
T Consensus 172 ii~De~y~~~~~~~~~--~----~~~~--~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~~~~~~~~~~------- 235 (350)
T TIGR03537 172 LCSDECYTEIYFGEPP--H----SALE--VGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLISFLRKLRANF------- 235 (350)
T ss_pred EEEeccccccccCCCC--C----chhh--cCcCCEEEEeecccccCCccccceeee-cCHHHHHHHHHHHHhh-------
Confidence 999 66643221110 0 0000 11111356668999987652 256554 4444443322111000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee-CCC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI-PPS 556 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~-p~~ 556 (629)
+. ++-......+..+|. ..+.+++..++..+..+.+.+.|++. |+++. +|.-+. .+|.. |..
T Consensus 236 ----------~~-~~~~~~q~~~~~~l~--~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~--~~~g~~-~~~~~~~~~ 298 (350)
T TIGR03537 236 ----------GV-ASPDFVQAAAKAAWS--DDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL--YPDATF-YLWVKVPSG 298 (350)
T ss_pred ----------cc-CCCHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc--CCCeEE-EEEEECCCC
Confidence 00 111111111111221 23344555666677778888888886 77654 355433 23332 221
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
.. ..++.+.|.++|..+....... +..+++|++++ .++++++..++.+++
T Consensus 299 ~~---------------~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 ID---------------AKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECEEALRLWER 349 (350)
T ss_pred CC---------------HHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHhc
Confidence 11 1256777888886544333221 12368999984 467888888877654
No 192
>PLN00175 aminotransferase family protein; Provisional
Probab=99.24 E-value=1.7e-08 Score=110.35 Aligned_cols=309 Identities=11% Similarity=0.064 Sum_probs=187.8
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS 324 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S 324 (629)
.|....+...+.+.+.+++.+..|++ .. +.++|+|+++++..++.+.. .|...|++..-.+..
T Consensus 86 ~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~--------------~~gd~Vlv~~P~y~~ 151 (413)
T PLN00175 86 QYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLI--------------NPGDEVILFAPFYDS 151 (413)
T ss_pred CcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhC--------------CCCCEEEEeCCCchh
Confidence 34444556667777777887777764 33 58889999998665554321 134456667777778
Q ss_pred HHHHHHHcCCCCCCEEEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCe
Q psy1785 325 IKKLAAFEGLGSDNVYLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMA 400 (629)
Q Consensus 325 i~kaa~~lGlg~~~v~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~ 400 (629)
+...++..|. +++.|+.++ ++.+|+++|++.+.. .+.+|+.+...+.+|.+- .+++|.++|+++++|
T Consensus 152 ~~~~~~~~g~---~~~~v~~~~~~~~~~~~~l~~~~~~------~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ 222 (413)
T PLN00175 152 YEATLSMAGA---KIKTVTLRPPDFAVPEDELKAAFTS------KTRAILINTPHNPTGKMFTREELELIASLCKENDVL 222 (413)
T ss_pred HHHHHHHcCC---EEEEEECCcccCCCCHHHHHHhcCc------CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcE
Confidence 8888999998 999999974 478999999988753 244566777888899885 577788899999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+++ +|....+-..+ .+. .... +... -..++.++-|.++.| .-+|.++... .+....... ..+.
T Consensus 223 ii~De~Y~~l~~~~~~--~s~-~~~~--~~~~-~vi~i~SfSK~~~~~G~RiG~~v~~~-~l~~~l~~~-~~~~------ 288 (413)
T PLN00175 223 AFTDEVYDKLAFEGDH--ISM-ASLP--GMYE-RTVTMNSLGKTFSLTGWKIGWAIAPP-HLTWGVRQA-HSFL------ 288 (413)
T ss_pred EEEecccCccccCCcc--cCh-hhCC--CCcC-cEEEEecchhhccCcchheeeeEeCH-HHHHHHHHH-Hhhc------
Confidence 999 77654321110 010 0111 1112 346778899999855 4467766543 344322110 0000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE-EeeC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAK--GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF-WYIP 554 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F-~~~p 554 (629)
. .+. ..+.-+++.+++ +..-+++..++..+..+++.+.|++. |+++. +|.-+.+.+ ++.|
T Consensus 289 ----------~-~~~---s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~p~g~~f~~~~~~~ 351 (413)
T PLN00175 289 ----------T-FAT---ATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY--PSSGTYFVMVDHTP 351 (413)
T ss_pred ----------c-CCC---CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec--CCCeeEEEEEeccc
Confidence 0 011 112222222222 33346666777777888899999887 78754 455443322 2222
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecC----CccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIH----ALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~----~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+.. + ..++.+.|. +.|..++...... ...+++|++++ . ++++++..++.|+++.+
T Consensus 352 ~~~~---~-----------~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~-~--~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 352 FGFE---N-----------DIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC-K--DEETLRAAVERMKTKLK 412 (413)
T ss_pred cCCC---C-----------HHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc-C--CHHHHHHHHHHHHHHHh
Confidence 1110 0 024556665 4586655433221 12358999996 2 68999999988887653
No 193
>PLN02656 tyrosine transaminase
Probab=99.24 E-value=2.3e-08 Score=109.24 Aligned_cols=327 Identities=12% Similarity=0.078 Sum_probs=188.7
Q ss_pred HHHHHHhcCCC-ccccccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCC
Q psy1785 235 GQWLADALNPS-VYTYEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCP 311 (629)
Q Consensus 235 ~~~lt~~~n~~-~~~~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p 311 (629)
.+.+..++..+ ...|...+....+.+.+.+++.+..|+ +..+.++|+|++++...++.+... |
T Consensus 54 ~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~--------------~ 119 (409)
T PLN02656 54 QEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQAIDVALSMLAR--------------P 119 (409)
T ss_pred HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHHHHHHHHHHHhC--------------C
Confidence 33344443332 233444445556666666666665554 446889999999987666554321 3
Q ss_pred CeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cC
Q psy1785 312 RLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DP 386 (629)
Q Consensus 312 ~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dp 386 (629)
...|+++.-+|.....++...|+ +++.+++++ ++.+|+++|++.+.. .+..|+.+..++.+|.+ ++
T Consensus 120 gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~s~~~ 190 (409)
T PLN02656 120 GANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQ------NTVALVIINPGNPCGNVYSYQH 190 (409)
T ss_pred CCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhcc------CceEEEEECCCCCCCCCCCHHH
Confidence 34566677777777778888898 999999863 357999999887743 24567777788999988 67
Q ss_pred HHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEec-------
Q psy1785 387 IPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRH------- 456 (629)
Q Consensus 387 l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~------- 456 (629)
+++|.++|+++++++++ +|+....-.. .+..+..... ... =.+..++-|.++.| +-+|.++..+
T Consensus 191 ~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~--~~~--vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~ 264 (409)
T PLN02656 191 LKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVFGS--IVP--VLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRD 264 (409)
T ss_pred HHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHhcc--cCc--EEEEcccchhccCcceeEEEEEEeCccccccc
Confidence 88999999999999999 7765432111 0000000000 011 24567789985555 5588888743
Q ss_pred cchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhc---ChhhHHHHHHHHHHHHHHHHHHHhcC
Q psy1785 457 QSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAK---GTDGLEAHIDKSFDNAKYFTDKIRHR 533 (629)
Q Consensus 457 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~---G~~G~~~~~~~~~~la~~l~~~L~~~ 533 (629)
+.+........ ... .+. ..+..+++..++ ...-+++..++..+..+.+.+.|+++
T Consensus 265 ~~~~~~~~~~~-~~~------------------~~~---s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 322 (409)
T PLN02656 265 PKIVERIKKYF-DIL------------------GGP---ATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI 322 (409)
T ss_pred HHHHHHHHHHH-hhh------------------cCC---CHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 22322211000 000 011 112222222222 23346666777777788899999887
Q ss_pred CCcEEEccCCCceEEEEEeeCCC-CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCH
Q psy1785 534 PGFKLVLDEPECTNISFWYIPPS-LRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDH 612 (629)
Q Consensus 534 ~g~~l~~~~p~~~~v~F~~~p~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~ 612 (629)
+++.... .|+-+.+++--.|.. ..+..+. ...+.+.+.+.|.++...... +..++||++++ . ++
T Consensus 323 ~~~~~~~-~p~gg~~~w~~l~~~~~~~~~~~----------~~~~~~~l~~~gV~v~pg~~f-g~~~~iRi~~~-~--~~ 387 (409)
T PLN02656 323 PCITCPH-KPEGSMAVMVKLNLSLLEDISDD----------IDFCFKLAREESVIILPGTAV-GLKNWLRITFA-A--DP 387 (409)
T ss_pred CCCcCCc-CCCeEEEEEEecchhhcCCCCCH----------HHHHHHHHHhCCEEEecchhc-CCCCeEEEEeC-C--CH
Confidence 6654333 455555433212210 0100000 012345666778765443333 33469999997 3 57
Q ss_pred HHHHHHHHHHHHHhh
Q psy1785 613 SDMDYFIDEIERLGH 627 (629)
Q Consensus 613 edid~l~~~i~~l~~ 627 (629)
++++..++.|+++..
T Consensus 388 e~l~eal~rl~~~~~ 402 (409)
T PLN02656 388 SSLEEALGRIKSFYL 402 (409)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888887777776543
No 194
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=5.4e-09 Score=112.99 Aligned_cols=287 Identities=13% Similarity=0.083 Sum_probs=178.1
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++.+|++..+.++++|++++...++.+... |...|++..-++......++..|+ ++
T Consensus 89 ~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~--------------~gd~Vlv~~P~y~~y~~~~~~~g~---~~ 151 (380)
T PLN03026 89 RRLRAALAEDSGLESENILVGCGADELIDLLMRCVLD--------------PGDKIIDCPPTFGMYVFDAAVNGA---EV 151 (380)
T ss_pred HHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcC--------------CCCEEEEcCCChHHHHHHHHHcCC---EE
Confidence 4577788899998878889999999887655443211 333455555555556667788898 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
+.+|.++++.+|+++|++++... .+.+|+.+..++.+|.+-|.+++.++++.. +++++ +|........ +
T Consensus 152 ~~v~~~~~~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~---~ 222 (380)
T PLN03026 152 IKVPRTPDFSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQES---R 222 (380)
T ss_pred EEeecCCCCCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcc---h
Confidence 99999888899999999888421 244677778999999999999999999864 77777 7654321100 0
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcc
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD 496 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 496 (629)
...+. ...-..+..++.|.++.| +-.|.++. ++..+.........| ...
T Consensus 223 ~~~~~------~~~~viv~~SfSK~~glaGlRiGy~~~-~~~~i~~l~~~~~~~-----------------------~~~ 272 (380)
T PLN03026 223 MKWVK------KYDNLIVLRTFSKRAGLAGLRVGYGAF-PLSIIEYLWRAKQPY-----------------------NVS 272 (380)
T ss_pred HHHHH------hCCCEEEEecchHhhcCccccceeeec-CHHHHHHHHHhcCCC-----------------------CCC
Confidence 00001 011346778889999744 44666665 334443321111100 011
Q ss_pred hHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 497 VLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 497 al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
.+...++..++.. +-+++..++..+..+++.+.|++++++++ . ++..+-+.+++ +.... ..
T Consensus 273 ~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~-p~~~~f~~~~~-~~~~~---------------~~ 334 (380)
T PLN03026 273 VAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-Y-PSDANFILCRV-TSGRD---------------AK 334 (380)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-C-CCCCeEEEEEC-CCCCC---------------HH
Confidence 2223333333322 23455666677788889999998855554 3 34444444443 21110 12
Q ss_pred HHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 576 KIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
++.+.|.++|..+..... .+..+++|++++ +.+++++++++|+++
T Consensus 335 ~~~~~l~~~gI~v~~~~~-~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 335 KLKEDLAKMGVMVRHYNS-KELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred HHHHHHHHCCeEEEECCC-CCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 567788888865432222 233468999996 678999999999875
No 195
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.24 E-value=2.6e-08 Score=108.11 Aligned_cols=308 Identities=13% Similarity=0.140 Sum_probs=178.5
Q ss_pred hHHHHHHHHHHHHHHHhCCC---CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH
Q psy1785 254 VFSLMEEHVLAQMRTIVGFQ---GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA 330 (629)
Q Consensus 254 ~~~~~E~~~~~~l~~l~G~~---~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~ 330 (629)
....+.+.+.+++.+..|+. ..+.++|+|++.++..++..... |...|++..-++......++
T Consensus 68 g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~--------------~gd~vl~~~p~y~~~~~~~~ 133 (391)
T PRK07309 68 GLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILE--------------PGDKVLLPAPAYPGYEPIVN 133 (391)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcC--------------CCCEEEEeCCCCcchHHHHH
Confidence 34566677777777666663 25788999999987766554321 33345566667777888888
Q ss_pred HcCCCCCCEEEEecCCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeEEE--e
Q psy1785 331 FEGLGSDNVYLIKTDAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~lhV--A 404 (629)
..|. +++.++.+++ +.+|++.|++++... ...+.+|+.+..++.+|.+- ++.+|.++|++|++++++ +
T Consensus 134 ~~g~---~~~~~~~~~~~~~~d~~~l~~~~~~~---~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~ 207 (391)
T PRK07309 134 LVGA---EIVEIDTTENDFVLTPEMLEKAILEQ---GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEV 207 (391)
T ss_pred HcCC---EEEEEecCCcCCcCCHHHHHHHhhcc---CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEcc
Confidence 9998 8999998765 479999999888642 11345666677788888764 588889999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
|.....-..+ ..+ .... ... --.+..+..|.++.| .-+|.++... +++...... ..|..
T Consensus 208 y~~~~~~~~~-~~~-~~~~----~~~-~~i~~~S~SK~~g~~GlRvG~~v~~~-~~~~~~~~~-~~~~~----------- 267 (391)
T PRK07309 208 YSELTYTGEP-HVS-IAEY----LPD-QTILINGLSKSHAMTGWRIGLIFAPA-EFTAQLIKS-HQYLV----------- 267 (391)
T ss_pred ccceeeCCCC-CCC-HHHh----ccC-CEEEEecChhhccCccceeEEEEeCH-HHHHHHHHH-Hhhcc-----------
Confidence 6654321110 000 0000 011 236778999999865 2366666543 444432111 11110
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee-CCCCCCCCc
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI-PPSLRGKED 562 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~-p~~~~~~~~ 562 (629)
.+........+-.+++. +..-..+..++..+..+++.+.|++. ++++. +|.-+.+ +|+. |+.... +
T Consensus 268 ------~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~--~p~gg~~-~~~~l~~~~~~--~ 334 (391)
T PRK07309 268 ------TAATTMAQFAAVEALTN-GKDDALPMKKEYIKRRDYIIEKMTDL-GFKII--KPDGAFY-IFAKIPAGYNQ--D 334 (391)
T ss_pred ------cCCChHHHHHHHHHHhC-ChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec--CCCeeEE-EEEECCCCCCC--C
Confidence 01111111111112221 21212333445556677888889887 77754 3554433 3332 322110 0
Q ss_pred hhhHHHHHhhHHHHHHHHH-HhcCcEEEeeeec-CCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 563 QADFNELLHKVAPKIKERM-MKSGSMMITYQPI-HALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l-~~~G~~~i~~~~~-~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..++.+++ .+.|..+..+... ....++||++++ . +.++++..++.|+++.++
T Consensus 335 -----------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~--~~~~l~~~i~~l~~~~~~ 388 (391)
T PRK07309 335 -----------SFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA-A--SMETIKEAMKRLKEYMEE 388 (391)
T ss_pred -----------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-C--CHHHHHHHHHHHHHHHHh
Confidence 02455554 4567654433222 112369999996 3 578999999888876553
No 196
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.24 E-value=3.9e-09 Score=113.35 Aligned_cols=308 Identities=15% Similarity=0.159 Sum_probs=181.9
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
++.+.++|++ +++.+|. ..++.+++||.|...++.+..- .|...|+++..+..+...+...
T Consensus 24 g~~~~~fE~~----~a~~~g~--~~~~~~~sgt~Al~~al~~l~~-------------~~gdeVi~p~~t~~~~~~ai~~ 84 (363)
T PF01041_consen 24 GPYVEEFEKE----FAEYFGV--KYAVAVSSGTSALHLALRALGL-------------GPGDEVIVPAYTFPATASAILW 84 (363)
T ss_dssp SHHHHHHHHH----HHHHHTS--SEEEEESSHHHHHHHHHHHTTG-------------GTTSEEEEESSS-THHHHHHHH
T ss_pred CHHHHHHHHH----HHHHhCC--CeEEEeCChhHHHHHHHHhcCC-------------CcCceEecCCCcchHHHHHHHH
Confidence 6777777776 6667774 4789999999998888776321 1456788899999999999999
Q ss_pred cCCCCCCEEEEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 332 EGLGSDNVYLIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 332 lGlg~~~v~~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
.|+ .++.+++| +++.||+++|+++|.+ .+..|+. +...|...|+++|.++|+++|++++- |.+.+
T Consensus 85 ~G~---~pv~~Di~~~~~~id~~~~~~~i~~------~t~ai~~---~h~~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g 152 (363)
T PF01041_consen 85 AGA---EPVFVDIDPETLNIDPEALEKAITP------KTKAILV---VHLFGNPADMDAIRAIARKHGIPLIEDAAQAFG 152 (363)
T ss_dssp TT----EEEEE-BETTTSSB-HHHHHHHHHT------TEEEEEE---E-GGGB---HHHHHHHHHHTT-EEEEE-TTTTT
T ss_pred hcc---EEEEEeccCCcCCcCHHHHHHHhcc------CccEEEE---ecCCCCcccHHHHHHHHHHcCCcEEEccccccC
Confidence 999 99999999 6799999999999876 2344544 46778888999999999999999888 33222
Q ss_pred ccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccc-cCCcCCCcccCCCCc
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLF-QKDKFYDTKYDSGDK 487 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~-~~~~~~~~~~~~~~~ 487 (629)
... ..+..|-...+-.+++...|.+.+. ..|+++++++++.++....+..-.. .....+.....
T Consensus 153 ~~~----------~g~~~G~~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---- 217 (363)
T PF01041_consen 153 ARY----------KGRPVGSFGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELP---- 217 (363)
T ss_dssp -EE----------TTEETTSSSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSS----
T ss_pred cee----------CCEeccCCCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCcccccccccccc----
Confidence 211 1111122111444555556988443 3588888887655543211100000 00000000000
Q ss_pred cCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCce-----EEEEEeeCCCCCCCCc
Q psy1785 488 HIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECT-----NISFWYIPPSLRGKED 562 (629)
Q Consensus 488 ~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~-----~v~F~~~p~~~~~~~~ 562 (629)
+...-|..-+.+-+.+.. .+-+.+.+++..++++++.+.|..++++.....++... .+.+++.+... .
T Consensus 218 -~g~n~rm~~~~AAigl~Q--L~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~--~-- 290 (363)
T PF01041_consen 218 -PGYNFRMSELQAAIGLAQ--LKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEAL--A-- 290 (363)
T ss_dssp -S--B-B-BHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGC--S--
T ss_pred -CCcccccHHHHHHHHHHH--HHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccccccc--c--
Confidence 001112233333333332 35678888999999999999999999987765222222 23444432210 0
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEe-e-eecC------C--------c-------cceEEEeecCCCCCHHHHHHHH
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMIT-Y-QPIH------A--------L-------PNFFRLVLQNSALDHSDMDYFI 619 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~-~-~~~~------~--------~-------~~~lR~~~~n~~~t~edid~l~ 619 (629)
+ ..++.+.|.++|.-.-. + .++. . . ...|-+-+ ++..+++|+++++
T Consensus 291 --~--------rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~-~~~lt~edv~~I~ 359 (363)
T PF01041_consen 291 --D--------RDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPI-HPRLTEEDVDYIA 359 (363)
T ss_dssp --T--------HHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEH-STTSCHHHHHHHH
T ss_pred --h--------HHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcC-CCCCCHHHHHHHh
Confidence 0 13678888889864211 1 0111 0 0 12455555 6999999999999
Q ss_pred HHHH
Q psy1785 620 DEIE 623 (629)
Q Consensus 620 ~~i~ 623 (629)
+.|+
T Consensus 360 ~~ir 363 (363)
T PF01041_consen 360 EAIR 363 (363)
T ss_dssp HHHH
T ss_pred hccC
Confidence 9885
No 197
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.24 E-value=1.9e-08 Score=109.88 Aligned_cols=310 Identities=15% Similarity=0.105 Sum_probs=185.3
Q ss_pred hhHHHHHHHHHHHHHHHhCCC---CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQ---GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~---~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
+....+-+.+.+++.+..|++ .. +.++|+|++++...++.+.. .|...|++..-++......
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~al~~~~~~~~--------------~~gd~Vlv~~P~y~~~~~~ 146 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPALAMLPSCFI--------------NPGDVTLMTVPGYPVTGTH 146 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHHHHHHHHHhC--------------CCCCEEEEeCCCCccHHHH
Confidence 344555566666776666754 34 68888888887655444221 1334455555666667778
Q ss_pred HHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE
Q psy1785 329 AAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV 403 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV 403 (629)
++..|. +++.||.+++ +.+|++.|++.+.. .+.+|+.+..++.+|.+-+ +.+|.++|+++++|+.+
T Consensus 147 ~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~ 217 (410)
T PRK06290 147 TKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKE------KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQ 217 (410)
T ss_pred HHHcCC---EEEEEecCCCcCCcCCHHHHHHhhcc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEE
Confidence 888998 9999999864 46799999887753 2456666778999999977 56777789999999999
Q ss_pred --ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 404 --TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 404 --A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
+|.....-..+. + ++... +... .+.+..++-|.++.|- -+|.++. ++.++.........+-
T Consensus 218 DEaY~~~~~~~~~~--s-~~~~~--~~~~-~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~~l~~~~~~~~--------- 281 (410)
T PRK06290 218 DAAYAALTFDGKPL--S-FLSVP--GAKE-VGVEIHSLSKAYNMTGWRLAFVVG-NELIVKAFATVKDNND--------- 281 (410)
T ss_pred ecchhhceeCCCCc--C-hhcCC--Cccc-cEEEEeechhhcCCchhheEeEEe-CHHHHHHHHHHHhccc---------
Confidence 666432211100 0 00110 1122 5688999999997553 3566554 4444433211110000
Q ss_pred ccCCCCccCCCCCCcchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEe-eCCCC-
Q psy1785 481 KYDSGDKHIQCGRKPDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWY-IPPSL- 557 (629)
Q Consensus 481 ~~~~~~~~~~~sr~~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~-~p~~~- 557 (629)
. + ...+...++..++-. +-+++..++..+..+++.+.|++. |+++. +|+.+.+ +|. .|+..
T Consensus 282 ---~------~---~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~p~g~f~-l~v~lp~~~~ 345 (410)
T PRK06290 282 ---S------G---QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE--MPGGTFY-LYVKAPKGTK 345 (410)
T ss_pred ---c------C---CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec--CCCeeeE-EEEECCCccc
Confidence 0 0 001111122222222 224555666677888899999887 78754 3555544 332 22221
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+... .-..++.++|.++|.+++. +..+..+++|++++.+..++++.++++++|++...+
T Consensus 346 ~~~~~---------~~~~~~~~~Ll~~~~v~~~--p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~ 405 (410)
T PRK06290 346 SGIKF---------ENAEEFSQYLIKEKLISTV--PWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRRLSD 405 (410)
T ss_pred cCCCC---------CCHHHHHHHHHHhCCEEEE--CCccccCeEEEEEEcccccccchhHHHHHHHHHHhh
Confidence 00000 0013577888888765543 222223589999988899999999999999887654
No 198
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.23 E-value=3.1e-09 Score=114.38 Aligned_cols=230 Identities=19% Similarity=0.172 Sum_probs=151.2
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCC----cchH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSED----AHYS 324 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~----~H~S 324 (629)
....|.+..+|+. ++++.|.+ ..+.+++|+.|+..++.+. - .|...|+++.. ++..
T Consensus 60 r~~~P~~~~lE~~----la~leg~~--~av~~sSG~aAi~~al~al-l-------------~~GD~Vl~~~~~yg~t~~~ 119 (384)
T PRK06434 60 RWGNPTVQAFEEK----YAVLENAE--HALSFSSGMGAITSAILSL-I-------------KKGKRILSISDLYGQTFYF 119 (384)
T ss_pred CCCChhHHHHHHH----HHHHhCCC--cEEEeCCHHHHHHHHHHHH-h-------------CCCCEEEEecCccchHHHH
Confidence 3356877777776 77777764 4688888887776666533 1 13334555543 2222
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-
Q psy1785 325 IKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV- 403 (629)
Q Consensus 325 i~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV- 403 (629)
+.+.+...|+ +++.+++++...+++ +. ..+.+|....-++.++.+-|+++|+++|++++ +.|
T Consensus 120 ~~~~~~~~Gi---~v~fvd~~~~~~~~l-------~~-----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD 182 (384)
T PRK06434 120 FNKVLKTLGI---HVDYIDTDRLNSLDF-------DP-----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVD 182 (384)
T ss_pred HHHHHHhcCc---EEEEECCCChhheee-------cC-----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEE
Confidence 3466677888 899998864333321 11 12446777778888999999999999999998 445
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
+++... ... . +..|+|.++.++||+++++-. .|++.++++...++... +..
T Consensus 183 ~t~~s~~-~~~-----------p--l~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~-----~~~------- 236 (384)
T PRK06434 183 ATFASPY-NQN-----------P--LDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE-----RRK------- 236 (384)
T ss_pred CCCCCcc-cCC-----------c--hhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH-----HHH-------
Confidence 654332 222 1 344799999999999998875 56666666544333211 000
Q ss_pred ccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC-----------ceEEE
Q psy1785 481 KYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE-----------CTNIS 549 (629)
Q Consensus 481 ~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~-----------~~~v~ 549 (629)
..|.....+.+|+.++ |.+-+..++++..+++..+.+.|+++|.++-+. -|. .++++
T Consensus 237 ---------~~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~-yPgl~~~~~~~~g~g~~~s 304 (384)
T PRK06434 237 ---------TLGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISNVY-YPDTEIGKKVLRGFGGMLS 304 (384)
T ss_pred ---------hcCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEE-CCChHHHHHhcCCCCceEE
Confidence 0122334677777665 667889999999999999999999999885443 232 45778
Q ss_pred EEee
Q psy1785 550 FWYI 553 (629)
Q Consensus 550 F~~~ 553 (629)
|.+.
T Consensus 305 f~l~ 308 (384)
T PRK06434 305 FELR 308 (384)
T ss_pred EEEC
Confidence 8764
No 199
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.23 E-value=4.2e-09 Score=113.60 Aligned_cols=302 Identities=13% Similarity=0.113 Sum_probs=173.5
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
++..+++++.+|.+ ..++++|||.+...++.+..- .|...|+++..+|.+...++...|+ ++
T Consensus 34 ~~~e~~la~~~g~~--~~v~~~sgt~al~~~l~~~~~-------------~~Gd~Viv~~~t~~~~~~~~~~~G~---~~ 95 (375)
T PRK11706 34 RRCQQWLEQRFGSA--KVLLTPSCTAALEMAALLLDI-------------QPGDEVIMPSYTFVSTANAFVLRGA---KI 95 (375)
T ss_pred HHHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHhCC-------------CCCCEEEECCCCcHHHHHHHHHcCC---EE
Confidence 33344577777774 688999999986655543211 2455688899999999999999999 99
Q ss_pred EEEecCCCC-CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 340 YLIKTDARG-RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 340 ~~V~~d~~g-~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
+.+++|+++ .+|+++|+++|.+ .+.+|+.+ +.+|...|+++|.++|+++|+++++ |++.+.....
T Consensus 96 v~~d~d~~~~~~d~~~le~~i~~------~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~--- 163 (375)
T PRK11706 96 VFVDIRPDTMNIDETLIEAAITP------KTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKG--- 163 (375)
T ss_pred EEEecCCCcCCcCHHHHHHhcCC------CCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCC---
Confidence 999998774 8999999988854 23445544 3578889999999999999999988 5543321111
Q ss_pred ccccccccccccCCcceEEEeCCC--CCCCCCCccEEEEEeccchhhhhhcCC-----CCccccCCcCCCcccCCCCccC
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPH--KLLTAPQQCSVFLTRHQSVLTECHSAS-----ASYLFQKDKFYDTKYDSGDKHI 489 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~H--K~l~~P~~~g~ll~r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~ 489 (629)
+..| .. .|.-++++| |.+... .-|++++.++++..++.... ........ ...+... .+
T Consensus 164 -------~~~g-~~-~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~--~~ 228 (375)
T PRK11706 164 -------RALG-TI-GHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQFFRGQ---VDKYTWV--DI 228 (375)
T ss_pred -------eeee-cC-cCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcchhhccC---CCcceee--ec
Confidence 1111 11 355555555 999653 34666676655544321111 00000000 0000000 01
Q ss_pred CCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC--C-cEEEccCCC----ceEEEEEeeCCCCCCCC
Q psy1785 490 QCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP--G-FKLVLDEPE----CTNISFWYIPPSLRGKE 561 (629)
Q Consensus 490 ~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~--g-~~l~~~~p~----~~~v~F~~~p~~~~~~~ 561 (629)
..+.+. ...+.+...+ .+.+++..++..++++++.+.|...+ + +++...++. ...+.+++ ++..
T Consensus 229 g~~~~~~~~~aa~~~~q---l~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---- 300 (375)
T PRK11706 229 GSSYLPSELQAAYLWAQ---LEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKL-RDLE---- 300 (375)
T ss_pred ccccCcCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEE-CCcC----
Confidence 111121 2233332222 23467788888889999999998876 2 332210111 11222222 1110
Q ss_pred chhhHHHHHhhHHHHHHHHHHhcCcEE-EeeeecC------------C-c-------cceEEEeecCCCCCHHHHHHHHH
Q psy1785 562 DQADFNELLHKVAPKIKERMMKSGSMM-ITYQPIH------------A-L-------PNFFRLVLQNSALDHSDMDYFID 620 (629)
Q Consensus 562 ~~~~~~~~l~~~~~~i~~~l~~~G~~~-i~~~~~~------------~-~-------~~~lR~~~~n~~~t~edid~l~~ 620 (629)
+ ..++.+.|.++|... ..|.++. + . ...|-+-+ ++..+++|++++++
T Consensus 301 ~-----------r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l~~~~~~~i~~ 368 (375)
T PRK11706 301 D-----------RSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPL-FYNLTDVEQRTVID 368 (375)
T ss_pred C-----------HHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccC-CCCCCHHHHHHHHH
Confidence 0 135677788888531 1111111 0 0 12344444 68899999999999
Q ss_pred HHHHHh
Q psy1785 621 EIERLG 626 (629)
Q Consensus 621 ~i~~l~ 626 (629)
.|+++.
T Consensus 369 ~i~~~~ 374 (375)
T PRK11706 369 TILEFF 374 (375)
T ss_pred HHHHHh
Confidence 998753
No 200
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.22 E-value=5.3e-09 Score=114.41 Aligned_cols=233 Identities=16% Similarity=0.140 Sum_probs=144.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHHHHHHcCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKKLAAFEGLG 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~kaa~~lGlg 335 (629)
.++.+.++++.|.+ ..+++++|+.++..++.+... |...|+++...+.. +...+...|+
T Consensus 60 ~~le~~lA~l~g~~--~~v~~~sG~~Ai~~al~~l~~--------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~- 122 (418)
T TIGR01326 60 DVLEQRIAALEGGV--AALAVASGQAAITYAILNLAQ--------------AGDNIVSSSYLYGGTYNLFKHTLKRLGI- 122 (418)
T ss_pred HHHHHHHHHHhCCC--eEEEEccHHHHHHHHHHHHhC--------------CCCEEEEECCCcHHHHHHHHHHHHHcCc-
Confidence 34455688888864 579999999998877765432 22345555555432 3455677788
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~ 413 (629)
+++.++.+ |+++|+++|.+ .+.+|.....++.+|.+.|+++|+++|+++|++++| +|+.... ..
T Consensus 123 --~v~~v~~~-----d~~~l~~~l~~------~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~~~~-~~ 188 (418)
T TIGR01326 123 --EVRFVDPD-----DPEEFEKAIDE------NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFATPYL-CR 188 (418)
T ss_pred --EEEEECCC-----CHHHHHHhcCc------CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCchhhc-CC
Confidence 88888753 78888888754 244666677788899999999999999999999999 7764322 11
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchhhhhhcCCCCccccCCcCCC-cccC--CCC---
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVLTECHSASASYLFQKDKFYD-TKYD--SGD--- 486 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~-~~~~--~~~--- 486 (629)
. ++.|+|.++.+++|+++.+-. .|.+++..+...... ... ..+......+. .... .+.
T Consensus 189 -----------~--l~~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~~~-~~~-~~~~~~~~~q~a~~~~~~~~~~~~ 253 (418)
T TIGR01326 189 -----------P--IDHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWAN-GRF-PLFTTPDPSYHGLVFTETFGNPAF 253 (418)
T ss_pred -----------c--hhcCCeEEEECccccccCCccceEEEEEecccccccc-ccc-ccccCCCCccccchhhhhhchhhH
Confidence 0 233699999999999987532 566666543221110 000 00000000000 0000 000
Q ss_pred -------ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 487 -------KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 487 -------~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
.....|-.......|..++ |...+..++++..+++..+.+.|.+.|++..+.
T Consensus 254 ~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~ 312 (418)
T TIGR01326 254 IVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWVN 312 (418)
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 0000111223455665544 567777788888889999999999999987654
No 201
>PRK12414 putative aminotransferase; Provisional
Probab=99.22 E-value=1.5e-08 Score=109.67 Aligned_cols=307 Identities=10% Similarity=0.050 Sum_probs=181.5
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC---CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG---GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~---~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|...++...+.+.+.+++++++|++. .+.++|+|++++...++.+.. .|...|++..-+|...
T Consensus 62 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~--------------~~gd~Vlv~~p~y~~~ 127 (384)
T PRK12414 62 YAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALV--------------HPGDEVIYFEPSFDSY 127 (384)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhc--------------CCCCEEEEeCCCccch
Confidence 43344556777888889999999852 468999999998665554321 1334566677778888
Q ss_pred HHHHHHcCCCCCCEEEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCCeE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDMAD 401 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~~l 401 (629)
...++..|. +++.||.++ ++.+|++.|++++.. .+.+|+.+...+.+|.+ +++.+|.++|+++++++
T Consensus 128 ~~~~~~~g~---~~~~v~~~~~~~~~d~~~l~~~l~~------~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~i 198 (384)
T PRK12414 128 APIVRLQGA---TPVAIKLSPEDFRVNWDEVAAAITP------RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVI 198 (384)
T ss_pred HHHHHHcCC---EEEEEecCccccccCHHHHHhhcCc------ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEE
Confidence 888888888 999999975 468999999988753 24566667788999987 67888999999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
.+ +|....+-..+. ..+..+. .... --.++.++.|.++.| .-+|.+...+ ++........ .+.
T Consensus 199 i~De~Y~~~~~~~~~~--~~~~~~~--~~~~-~~i~~~SfSK~~~~pGlRiG~~v~~~-~l~~~l~~~~-~~~------- 264 (384)
T PRK12414 199 LSDEVYEHVVFDGARH--HSMARHR--ELAE-RSVIVSSFGKSYHVTGWRVGYCLAPA-ELMDEIRKVH-QFM------- 264 (384)
T ss_pred EEhhhhhhccCCCCCc--cCcccCc--CccC-cEEEEecccccccCccceEEEEecCH-HHHHHHHHHH-hhe-------
Confidence 99 665432211100 0000111 1111 236888999999755 4467777644 3333221100 000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE-EeeCCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF-WYIPPS 556 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F-~~~p~~ 556 (629)
. .+. ..+..+++...+.. ..+.+..+...+..+++.+.|++. |+++. +|.-+.+.+ ++.+ .
T Consensus 265 ---------~-~~~---s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~gg~~~~~~~~~-~ 327 (384)
T PRK12414 265 ---------V-FSA---DTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL--PSEGSFFMLARFRH-F 327 (384)
T ss_pred ---------e-cCC---CcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec--CCCcceEEEEcccc-c
Confidence 0 011 11222222233322 223444555667788888999886 77754 354444333 2221 0
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeec--CCc-cceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPI--HAL-PNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~--~~~-~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
... .+ . ..+.+.+.+.|..+...... .+. .+++|++++ . ++++++..++.|.+
T Consensus 328 ~~~--~~----~------~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~-~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 328 SDE--SD----S------DFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS-K--DDATLVEGARRLCS 383 (384)
T ss_pred CCC--CH----H------HHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec-C--CHHHHHHHHHHHhh
Confidence 000 00 0 12334566778765443322 121 368999997 2 47777777766654
No 202
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.22 E-value=4.5e-09 Score=112.62 Aligned_cols=286 Identities=11% Similarity=0.058 Sum_probs=175.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++.++.+..+.++|+|++++...++.+.. .|...|++..-+...+..++...|. ++
T Consensus 67 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~--------------~~gd~v~~~~p~y~~~~~~~~~~g~---~~ 129 (359)
T PRK03158 67 PELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALL--------------NPGTNTVMAEPTFSQYRHNAIIEGA---EV 129 (359)
T ss_pred HHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHh--------------CCCCEEEEcCCCHHHHHHHHHHcCC---eE
Confidence 455667888888877788999999887654433221 1333466666666667778888898 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--cCCeEEE--ecCccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE--YDMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~--~~~~lhV--A~gg~~l~~~~~ 415 (629)
+.+|.+ ++.+|+++|++.+.+ .+.+|+.+...+.+|.+-|.+++.++++. +++++++ +|........
T Consensus 130 ~~~~~~-~~~~d~~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~-- 200 (359)
T PRK03158 130 REVPLK-DGGHDLEAMLKAIDE------QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAED-- 200 (359)
T ss_pred EEEecC-CCCcCHHHHHHhcCC------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcc--
Confidence 999997 678999999887643 23356667789999999999999999887 4888888 6654332110
Q ss_pred cccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
..+.+-.... . +-..+..++.|.++.| .-+|.++..+ +.++........ + +
T Consensus 201 ~~~~~~~~~~---~-~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~~~~~~~~~~-----------------~---~--- 252 (359)
T PRK03158 201 YPDTLPLLEK---Y-ENLIVLRTFSKAYGLAALRVGYGIASE-ELIEKLNIARPP-----------------F---N--- 252 (359)
T ss_pred cccHHHHHHh---c-CCEEEEEechHhhcCcchhhehhcCCH-HHHHHHHHhcCC-----------------C---C---
Confidence 0000000000 1 1346667888999855 4467776543 444332111000 0 1
Q ss_pred cchHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhH
Q psy1785 495 PDVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKV 573 (629)
Q Consensus 495 ~~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~ 573 (629)
...+...++..++.... +++..+...+..+++.+.|++. ++++. ++..+.+.+.. + ..
T Consensus 253 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~--~~~g~~i~~~~-~--~~--------------- 311 (359)
T PRK03158 253 TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY--PSQTNFIFVDT-G--RD--------------- 311 (359)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC--CCcCcEEEEEC-C--CC---------------
Confidence 12233333334433333 4444555566777888888887 77654 34433222222 1 00
Q ss_pred HHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 574 APKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 574 ~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..++.+.|.++|..+...... +..+++|++++ +.+|+++++++|+++
T Consensus 312 ~~~~~~~l~~~gv~v~~g~~f-~~~~~iRi~~~----~~~~~~~l~~al~~~ 358 (359)
T PRK03158 312 ANELFEALLKKGYIVRSGAAL-GFPTGVRITIG----LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHHCCeEEeeCCCC-CCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence 125667777888654443223 23469999986 899999999999875
No 203
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.22 E-value=2.9e-09 Score=112.82 Aligned_cols=273 Identities=11% Similarity=0.075 Sum_probs=169.4
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+++++++|.+..+.++|+|++++... +..+.. +. .|++..-++.++...+...|+ ++
T Consensus 50 ~~lr~~la~~~~~~~~~i~~t~G~~~~i~~-~~~~l~--------------~g-~vl~~~p~y~~~~~~~~~~g~---~~ 110 (330)
T TIGR01140 50 DELRAAAAAYYGLPAASVLPVNGAQEAIYL-LPRLLA--------------PG-RVLVLAPTYSEYARAWRAAGH---EV 110 (330)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHH-HHHHhC--------------CC-eEEEeCCCcHHHHHHHHHcCC---EE
Confidence 566678888899877788889888887554 322221 23 355556677788888888888 88
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+.++ |++.|++.+.+ +-.|+.+...+.+|.+-| +.+|.++|+++|+++++ +|..... ..
T Consensus 111 ~~~~-------d~~~l~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~-~~- 174 (330)
T TIGR01140 111 VELP-------DLDRLPAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTP-DA- 174 (330)
T ss_pred EEeC-------CHHHHHhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCC-cc-
Confidence 8876 78888887632 225667778899999988 66677788999999999 7765432 11
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
.+. ... +.. +-+.++.+++|+++.| ..+|.++.++ ..+......... +
T Consensus 175 -~~~---~~~--~~~-~~~i~~~S~SK~~g~~G~R~G~i~~~~-~~~~~l~~~~~~-----------------~------ 223 (330)
T TIGR01140 175 -SLA---PQA--ARF-PGLVVLRSLTKFFGLAGLRLGFVVAHP-ALLARLREALGP-----------------W------ 223 (330)
T ss_pred -chh---hHh--ccC-CCEEEEEecchhhcCchhhhhheeCCH-HHHHHHHhcCCC-----------------C------
Confidence 000 000 011 2578999999999855 5578888765 344432111100 0
Q ss_pred CcchHHHHHHHHhcChhhH-HHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 494 KPDVLKFWFMWKAKGTDGL-EAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 494 ~~~al~~w~~l~~~G~~G~-~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
....+...++.+.+...++ ++..++..++.+++.+.|++.+.+++. |..+.+ +|+.-+.
T Consensus 224 ~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~~~~f-~~~~~~~---------------- 283 (330)
T TIGR01140 224 TVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV---GGTALF-LLVRTPD---------------- 283 (330)
T ss_pred CchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC---CCCCeE-EEEEcCC----------------
Confidence 0112233333344434444 555677777899999999998656543 233332 3432110
Q ss_pred HHHHHHHHHHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..++.++|.++|.++.......+ ..+++|++++ +..++ +.++++|+
T Consensus 284 -~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~-~~~~~~l~ 330 (330)
T TIGR01140 284 -AAALHEALARRGILIRDFDNFPGLDPRYLRFALP---TDEEN-DRLEEALA 330 (330)
T ss_pred -HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEec---CHHHH-HHHHHhhC
Confidence 12567888888876655443322 2358999986 23355 88887763
No 204
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.22 E-value=1.5e-09 Score=116.16 Aligned_cols=281 Identities=12% Similarity=0.070 Sum_probs=173.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCC-eEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPR-LVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~-~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.++.+.+++.+|++..+..+|+|++++...++.+... |. ..|++..-++..+...++..|+ +
T Consensus 63 ~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~--------------~g~d~vlv~~P~y~~y~~~~~~~g~---~ 125 (354)
T PRK04635 63 PELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCE--------------PGQDSIACFGPTYGMYAISAETFNV---G 125 (354)
T ss_pred HHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcC--------------CCCCeEEEcCCChHHHHHHHHHcCC---E
Confidence 4556677888899888999999999987655543211 22 3455555555566777888998 9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc-CCeEEE--ecCccccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY-DMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~-~~~lhV--A~gg~~l~~~~~ 415 (629)
++.||.++++.+|++.++ .+. .+-+|..+...+.+|.+-|.+++.++++.. ++++.+ +|..... ...
T Consensus 126 v~~v~~~~~~~~~~~~l~-~~~-------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~--~~s 195 (354)
T PRK04635 126 VKALPLTADYQLPLDYIE-QLD-------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCP--EYS 195 (354)
T ss_pred EEEEecCCCCCCCHHHHH-hcc-------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhcc--Ccc
Confidence 999999888899998886 221 244677789999999999999999999874 677777 7654221 100
Q ss_pred cccccccccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
.++ +.. . .+. + .+..+++|+++. .+-+|.++..+ +.+.........| +
T Consensus 196 ~~~-~~~--~--~~~-~-iv~~S~SK~~~l~GlRlG~~i~~~-~~~~~l~~~~~~~-----------------~------ 244 (354)
T PRK04635 196 VAD-LLA--S--YPN-L-VVLRTLSKAFALAGARCGFTLANE-ELIEILMRVIAPY-----------------P------ 244 (354)
T ss_pred hHH-HHh--h--CCC-E-EEEechHHHhhhhHHHHhhhhCCH-HHHHHHHhhcCCC-----------------C------
Confidence 000 000 0 112 2 567899999873 34478777644 4443321111000 0
Q ss_pred cchHHHHHHHHhc---ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 495 PDVLKFWFMWKAK---GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 495 ~~al~~w~~l~~~---G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
.......+++..+ |.+-+++.+++..+..+++.+.|++.+++++. ++..+-+.+++ + .
T Consensus 245 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~g~f~~~~~-~-~--------------- 305 (354)
T PRK04635 245 VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL--EGNGNYVLAKF-D-D--------------- 305 (354)
T ss_pred CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC--CCCCcEEEEEC-C-C---------------
Confidence 0111112223333 22334555666677778899999998667754 34443232222 1 0
Q ss_pred hHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 572 KVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 572 ~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
..++.+.|.++|..+..+. ..+..+++|++++ +.+|+++++++|++
T Consensus 306 --~~~~~~~l~~~gv~v~~~~-~~~~~~~lRis~~----~~e~~~~l~~al~~ 351 (354)
T PRK04635 306 --VDAVFKALWDAGIVARAYK-DPRLANCIRFSFS----NRAETDKLIGLIRN 351 (354)
T ss_pred --HHHHHHHHHHCCEEEEECC-CCCCCCeEEEEeC----CHHHHHHHHHHHHH
Confidence 0245667777886443221 1223468999985 78999999999976
No 205
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.22 E-value=3.7e-09 Score=113.15 Aligned_cols=285 Identities=14% Similarity=0.139 Sum_probs=178.3
Q ss_pred HHHHHHHHHHhCCCCC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.+..+.+++.+|.+.. +.++++|++++...++.+.. .|...|++..-++..+..+++..|+ +
T Consensus 66 ~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~--------------~~gd~vlv~~P~y~~~~~~~~~~g~---~ 128 (356)
T PRK04870 66 AALKAALRAAMGVPAGADVLLGNGSDELIQLLALACA--------------KPGATVLAPEPGFVMYRMSAKLAGL---E 128 (356)
T ss_pred HHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhc--------------CCCCEEEECCCCHHHHHHHHHHcCC---E
Confidence 4566778888888754 67778777776554443221 1344566777778888888999999 9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
++.+|.++++.+|++.|++.+... .+.+|..+...+.+|.+-|.+++.++++..+.++++ +|.... ....
T Consensus 129 ~~~i~~~~~~~~d~~~l~~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~--~~~~- 200 (356)
T PRK04870 129 FVGVPLTADFTLDLPAMLAAIAEH-----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFA--GDSW- 200 (356)
T ss_pred EEEecCCCCCCCCHHHHHHHhhcC-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhc--Ccch-
Confidence 999999988899999999888531 234566677899999999999999998877888888 665421 1100
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
.+ ... ..+. -.+..++.|+ +.| .-+|.++..+ ..+.........+ . .+ ..
T Consensus 201 ~~---~~~--~~~~--vi~~~S~SK~-~~~GlRiG~~i~~~-~~i~~~~~~~~~~-----------------~--~~-~~ 251 (356)
T PRK04870 201 LP---RLA--RFPN--LLVMRTVSKL-GLAGLRLGYLAGHP-AWIAELDKVRPPY-----------------N--VN-VL 251 (356)
T ss_pred HH---HHh--hCCC--EEEEecchhh-hhHHHhhhhhhCCH-HHHHHHHHccCCC-----------------c--CC-HH
Confidence 00 000 1112 3677888994 433 3377766543 4444321111000 0 01 01
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
....+..+++. .+-+++..++..+.++++.+.|++.+++++ . ++..+.+.+++ |. ..
T Consensus 252 ~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~-~~~~~~~~~~~-~~------------------~~ 308 (356)
T PRK04870 252 TQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVTV-F-PSAANFILVRV-PD------------------AA 308 (356)
T ss_pred HHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcEE-C-CCCCeEEEEEC-CC------------------HH
Confidence 11112222221 234677778888899999999999888865 3 34444333432 10 02
Q ss_pred HHHHHHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 576 KIKERMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
++.+.|.++|.......... ...+++|++++ +.+++++|+++|+++
T Consensus 309 ~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 355 (356)
T PRK04870 309 AVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKAA 355 (356)
T ss_pred HHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence 45677888886543322221 22469999996 789999999999875
No 206
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.22 E-value=2.7e-09 Score=115.19 Aligned_cols=320 Identities=15% Similarity=0.205 Sum_probs=182.4
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK 327 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k 327 (629)
.|..+|.+..+|+. +++++|.+ ..+.++.||.++..+... ++ .|..+| +..+|+...+
T Consensus 73 ~Yagd~s~~~LE~~----vAe~lG~e--~aV~v~sGTaAl~ll~~l------------~v--~pGd~V--p~n~~f~Tt~ 130 (460)
T PRK13237 73 AYAGSRNFYHLEET----VQEYYGFK--HVVPTHQGRGAENLLSRI------------AI--KPGQYV--PGNMYFTTTR 130 (460)
T ss_pred hhcCCCcHHHHHHH----HHHHHCCC--eEEEeCCHHHHHHHHHHh------------CC--CCcCEE--CCccchHhhH
Confidence 46778888888877 66788886 489999999987754221 11 133333 6677776665
Q ss_pred H-HHHcCCCCCCEEEEec----------CCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcc-c---cccCHHHHHH
Q psy1785 328 L-AAFEGLGSDNVYLIKT----------DARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVL-G---AFDPIPAIAD 392 (629)
Q Consensus 328 a-a~~lGlg~~~v~~V~~----------d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~-G---~idpl~ei~~ 392 (629)
+ ....|. ..+-+.. ..+|.||++.|+++|.+... ...-+|.++...+.. | +.+++++|.+
T Consensus 131 ahI~~~Ga---~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGqpvs~~~m~~I~e 205 (460)
T PRK13237 131 YHQELNGG---IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQPVSMANMRAVRE 205 (460)
T ss_pred HHHHhCCc---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC--CccCceEEEEecccCCCeeCCHHhHHHHHH
Confidence 5 444443 2222221 24689999999999975211 122234444444555 3 2468999999
Q ss_pred HHHHcCCeEEE----ecCccccccccccccccccccccc--------cCCcceEEEeCCCCCCCCCCccEEEEEeccchh
Q psy1785 393 ICAEYDMADSV----TWNPHKLLTAPQQCSVFLTRRNYV--------IEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVL 460 (629)
Q Consensus 393 i~~~~~~~lhV----A~gg~~l~~~~~~~~~~l~~~~~~--------i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l 460 (629)
+|++||+.+|. +++...+. ..-.. .+.+.. ... +|.+++|+||-+++|. -|++.++++++.
T Consensus 206 lA~~~Gl~Vi~DaAra~gna~fI-~~re~----~y~~~~i~ei~~e~~s~-aD~~t~S~~K~~~~~~-GG~i~t~D~eL~ 278 (460)
T PRK13237 206 LCDKHGIKVFFDATRCVENAYFI-KEREE----GYQDKSIKEIVHEMFSY-ADGCTMSGKKDCLVNI-GGFLAMNDEELF 278 (460)
T ss_pred HHHHcCCEEEEECcchhcChhhh-ccccc----ccCCCcHhHHhhhccCc-CcEEEEeCCCCCCCCC-ceEEEECCHHHH
Confidence 99999999999 34443222 10000 011111 235 9999999999999987 488888998877
Q ss_pred hhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhH-HHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 461 TECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGL-EAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 461 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~-~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
+++......|- +...++. -.+|...++++ .+. ++. ...+++.++.++||.+.|.+. |+.++
T Consensus 279 ~~~r~~~~~~e--------G~~tygg---~~grd~~alAv--gl~----E~~~~~y~~~ri~~~~~l~~~L~~~-Gvpv~ 340 (460)
T PRK13237 279 DEAKELVVVYE--------GMPSYGG---MAGRDMEAMAI--GIE----ESVQYEYIEHRVGQVRYLGEKLLAA-GVPIV 340 (460)
T ss_pred HHHHHhccccC--------CCcCCCC---hhhhHHHHHHh--HHH----hhchHHHHHHHHHHHHHHHHHHHHC-CCcee
Confidence 76543322221 1111111 12455444332 221 111 167778888999999999986 99888
Q ss_pred ccCCCceEEEE---EeeCCCCCCCCchhhHHHHHhhHHHHHHH----HHHhcCcEEEeeeecCCc-----cceEEEeecC
Q psy1785 540 LDEPECTNISF---WYIPPSLRGKEDQADFNELLHKVAPKIKE----RMMKSGSMMITYQPIHAL-----PNFFRLVLQN 607 (629)
Q Consensus 540 ~~~p~~~~v~F---~~~p~~~~~~~~~~~~~~~l~~~~~~i~~----~l~~~G~~~i~~~~~~~~-----~~~lR~~~~n 607 (629)
. +..-.-|.. ++.| .+... ++.. ..++.+++. |-++.|.++.+..+-.+. ...+|+++--
T Consensus 341 ~-p~ggH~v~vda~~~lp-h~~~~----~~p~--~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaipr 412 (460)
T PRK13237 341 E-PVGGHAVFLDARRFLP-HLPQD----QFPA--QALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPR 412 (460)
T ss_pred c-CCCceEEEEEhHHhCC-CCCcc----cChH--HHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeecccc
Confidence 6 332222222 1122 11111 1111 111122222 112233333332221111 2579999954
Q ss_pred CCCCHHHHHHHHHHHHHHhh
Q psy1785 608 SALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 608 ~~~t~edid~l~~~i~~l~~ 627 (629)
-.-|.+++|++.+.|..+.+
T Consensus 413 r~yt~~h~~~v~~~~~~~~~ 432 (460)
T PRK13237 413 RVYTYAHMDVVADSVIKLYK 432 (460)
T ss_pred ccccHHHHHHHHHHHHHHHH
Confidence 44699999999999988764
No 207
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.22 E-value=9.5e-09 Score=112.67 Aligned_cols=167 Identities=15% Similarity=0.126 Sum_probs=107.5
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcc--h----HHHHHHHHcC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAH--Y----SIKKLAAFEG 333 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H--~----Si~kaa~~lG 333 (629)
..+.+.+++++|.+. .+++++|+.++..++. +.. +...|+++...| | ++...++..|
T Consensus 125 ~~le~~lA~l~gae~--alvv~sg~aAi~l~l~-~l~--------------~GdeVIvs~~e~v~~ggs~~i~~~~~~~G 187 (454)
T TIGR00474 125 SHVEGLLCELTGAED--ALVVNNNAAAVLLALN-TLA--------------KGKEVIVSRGELVEIGGSFRIPDVMEQSG 187 (454)
T ss_pred HHHHHHHHHHhCCCc--EEEECCHHHHHHHHHH-HhC--------------CcCEEEECCChhhhhcchhhHHHHHHHcC
Confidence 556677999999864 5678888888766653 221 233566676554 2 3555666778
Q ss_pred CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCc--cc--cccCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 334 LGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTV--LG--AFDPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 334 lg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~--~G--~idpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
+ +++.++++ +..|+++++++|.+ .+.+|..++.++. .| .+-|+++|+++||++|+.+.| +.|.
T Consensus 188 ~---~~~~v~~~--~~~~l~dle~aI~~------~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~ 256 (454)
T TIGR00474 188 A---KLVEVGTT--NRTHLKDYEDAITE------NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGS 256 (454)
T ss_pred C---EEEEeCCC--CCCCHHHHHHhcCc------CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcc
Confidence 7 88877653 45688999988854 2445555555554 45 477999999999999999999 3222
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEecc
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQ 457 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~ 457 (629)
.. -..++....--...+ .++.|+|.+++++|||+++|. +|+++.+++
T Consensus 257 l~-~~~~~gl~~~p~~~~-~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 257 LV-DLSRYGLPDEPTVQE-VIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred cc-cchhccCCCCccccc-HhHcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 10 000000000000001 134579999999999999995 788887763
No 208
>PRK08960 hypothetical protein; Provisional
Probab=99.21 E-value=2e-08 Score=108.85 Aligned_cols=307 Identities=12% Similarity=0.072 Sum_probs=174.0
Q ss_pred cccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|...+....+.+.+.+++.+..|+ +..+.++|+|++++...++.+.. .|...|++..-+|.+..
T Consensus 65 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~--------------~~gd~vlv~~p~y~~~~ 130 (387)
T PRK08960 65 YTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLV--------------DPGKHWLLADPGYPCNR 130 (387)
T ss_pred cCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhc--------------CCCCEEEEcCCCCcchH
Confidence 433444555556666666655554 45789999999998766554321 14456778888888888
Q ss_pred HHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI---PAIADICAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl---~ei~~i~~~~~~~l 401 (629)
..+...|. +++.||++++ +.+|++.|++.+.+ ....|+.+..++.+|.+-+. .+|+++|+++++++
T Consensus 131 ~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~l 201 (387)
T PRK08960 131 HFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNA------DTVGALVASPANPTGTLLSRDELAALSQALRARGGHL 201 (387)
T ss_pred HHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCc------cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEE
Confidence 88888888 8999999765 47999999887754 23456667788999998764 45666789999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
.+ +|..... ..+ ...++ .+.. --.+..+++|.++.| .-+|.++..+ .++.........+
T Consensus 202 i~De~Y~~~~~-~~~--~~~~~-----~~~~-~vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~~~~~~~-------- 263 (387)
T PRK08960 202 VVDEIYHGLTY-GVD--AASVL-----EVDD-DAFVLNSFSKYFGMTGWRLGWLVAPP-AAVPELEKLAQNL-------- 263 (387)
T ss_pred EEEcccccccc-CCC--CCChh-----hccC-CEEEEeecccccCCcccEEEEEEcCH-HHHHHHHHHHhhh--------
Confidence 99 7765322 110 00001 1211 125678999998744 3378877654 3443221100000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLR 558 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~ 558 (629)
. .+........+...+......-+++..+...+..+.+.+.|++. ++.+.. .|.-+.+. |...+..
T Consensus 264 ---------~-~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~-~p~g~~f~-~~~~~~~- 329 (387)
T PRK08960 264 ---------Y-ISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAV-EPQGAFYL-YADISAF- 329 (387)
T ss_pred ---------c-cCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCc-CCCeeEEE-EEecccc-
Confidence 0 01111111111112221112334444455566677788888886 665533 35544443 3321110
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecCC--ccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIHA--LPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~~--~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.. + ..++.+.+. +.|..+........ ..++||++++ . +.+.+...++.|.++
T Consensus 330 ~~-~-----------~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~-~--~~~~l~~al~~l~~~ 384 (387)
T PRK08960 330 GG-D-----------AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYT-Q--SLPRLQEAVERIARG 384 (387)
T ss_pred CC-C-----------HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEec-C--CHHHHHHHHHHHHHH
Confidence 00 0 124555654 46765433222221 2358999997 3 456666665555544
No 209
>PRK07550 hypothetical protein; Provisional
Probab=99.21 E-value=3.3e-08 Score=107.01 Aligned_cols=308 Identities=11% Similarity=0.101 Sum_probs=178.6
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
.|...+....+.+.+.+++.+..|.. ..+.++|+|++.+...++.+.. .|...|++..-++...
T Consensus 62 ~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~--------------~~gd~Vlv~~p~y~~~ 127 (386)
T PRK07550 62 LYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLA--------------GAGDEVILPLPWYFNH 127 (386)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhc--------------CCCCEEEEcCCCCcch
Confidence 34334556677777777888777743 4678889998888655544321 1344566676666666
Q ss_pred HHHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCe
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMA 400 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~ 400 (629)
...++..|+ +++.|+.++ .+.+|+++|++.+++ .+..|+.+..++.+|.+-| +.+|.++|++++++
T Consensus 128 ~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~ 198 (386)
T PRK07550 128 KMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITP------RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIA 198 (386)
T ss_pred HHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcc------cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeE
Confidence 677788898 999999974 346899999998864 2334555666788887765 78899999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+++ +|+....-.. ...+.+ ...+ ... -..+..++.|.++.| ..+|+++..+ ..+..... ++...
T Consensus 199 iI~Dd~y~~~~~~~~-~~~~~~-~~~~--~~~-~~i~~~S~SK~~g~~G~RiG~i~~~~-~~~~~~~~----~~~~~--- 265 (386)
T PRK07550 199 LILDETYRDFDSGGG-APHDLF-ADPD--WDD-TLVHLYSFSKSYALTGHRVGAVVASP-ARIAEIEK----FMDTV--- 265 (386)
T ss_pred EEEeccchhhccCCC-CCcchh-hCCC--ccc-cEEEEecchhhccCcccceEeeecCH-HHHHHHHH----HHhhc---
Confidence 999 6654321000 000000 0000 001 134578999999744 4577777644 33333211 11100
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcC--hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEe-eC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKG--TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWY-IP 554 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G--~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~-~p 554 (629)
+. +. ..+..+++.+.+. .+-.++..++..+..+++.+.|.+++++.+. |.-+.+ +|+ .|
T Consensus 266 ----------~~-~~---s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~---~~g~~~-~~~~~~ 327 (386)
T PRK07550 266 ----------AI-CA---PRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL---ASGAYF-AYVRHP 327 (386)
T ss_pred ----------cc-CC---CcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC---CCceEE-EEecCC
Confidence 00 11 1122222222222 2233444455666788888999887676532 232322 232 12
Q ss_pred C-CCCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 555 P-SLRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 555 ~-~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
. ..+ ..++.++|. +.|........+. ...+++|++++ ..++++++..++.|+++.
T Consensus 328 ~~~~~---------------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~~~~~l~~~~ 385 (386)
T PRK07550 328 FPDRP---------------SREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFA--NADVAGIGELVERLRAFA 385 (386)
T ss_pred CCCCC---------------HHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEee--cCCHHHHHHHHHHHHhhC
Confidence 1 110 135666664 4676443322221 11358999995 456899999999988764
No 210
>PLN02242 methionine gamma-lyase
Probab=99.21 E-value=6.5e-09 Score=113.44 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=145.0
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH--
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA-- 329 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa-- 329 (629)
.|....+|+ .++++.|.+ ...+++||+.++..++.+... |...|+++...+.......
T Consensus 75 ~Pt~~~LE~----~lA~l~g~~--~~l~~~sG~~Ai~~al~al~~--------------~GD~Vl~~~~~Y~~~~~~~~~ 134 (418)
T PLN02242 75 NPTVLNLGR----QMAALEGTE--AAYCTASGMSAISSVLLQLCS--------------SGGHVVASNTLYGGTHALLAH 134 (418)
T ss_pred ChhHHHHHH----HHHHHhCCC--eEEEEccHHHHHHHHHHHHhC--------------CCCEEEEcCCcHHHHHHHHHH
Confidence 565555554 478888875 467899999998877765432 3345666666544443332
Q ss_pred ---HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 330 ---AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 330 ---~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
+..|+ +++.++. .|+++|+++|.. ..+.+|+....++.+|.+.|+++|+++|+++|++++| +
T Consensus 135 ~~~~~~G~---~~~~~d~-----~d~e~l~~~i~~-----~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea 201 (418)
T PLN02242 135 FLPRKCNI---TTTFVDI-----TDLEAVKKAVVP-----GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNT 201 (418)
T ss_pred hhhhccCc---eEEEcCC-----CCHHHHHHhcCc-----CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECC
Confidence 33565 5665554 278888887743 1255777888889999999999999999999999999 7
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|.... ..+ .+.|+|+++.+++|+++++.. .|+++ .++.+...........
T Consensus 202 ~~~~~-~~~--------------~~~g~divv~S~SK~l~g~g~~~gG~iv-~~~~li~~l~~~~~~~------------ 253 (418)
T PLN02242 202 FAPMV-LSP--------------ARLGADVVVHSISKFISGGADIIAGAVC-GPAELVNSMMDLHHGA------------ 253 (418)
T ss_pred CCccC-CCH--------------HHcCCcEEEEeCccccCCCCCceEEEEE-cCHHHHHHHHHHhhhh------------
Confidence 75432 211 122599999999999987754 35554 4444444332111000
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
....+.......+|..++ +..-+..++++..+++.++.+.|++. ++++..
T Consensus 254 -----~~~~g~~~~~~~A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~y 303 (418)
T PLN02242 254 -----LMLLGPTMNPKVAFELSE--RLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIY 303 (418)
T ss_pred -----hhccCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEEC
Confidence 001122334556666554 45567778889999999999999998 678774
No 211
>PRK07777 aminotransferase; Validated
Probab=99.21 E-value=3.2e-08 Score=107.14 Aligned_cols=309 Identities=14% Similarity=0.101 Sum_probs=183.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC--C-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG--G-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~--~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|...+....+.+.+.+++.+..|++. . +.++|+|+++++..++.... .|...|++..-+|...
T Consensus 57 Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~--------------~~gd~vli~~p~y~~~ 122 (387)
T PRK07777 57 YPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLV--------------EPGDEVLLIEPYYDSY 122 (387)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhc--------------CCCCEEEEeCCCchhh
Confidence 44445566677777778888888753 2 58899999998766554221 1333456666677778
Q ss_pred HHHHHHcCCCCCCEEEEecCCC---CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCC
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDAR---GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDM 399 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~---g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~ 399 (629)
..++...|. +++.++.+++ +.+|+++|++.+.+ .+.+|+.+...+.+|.+ +++++|.++|+++++
T Consensus 123 ~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ 193 (387)
T PRK07777 123 AAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTP------RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDL 193 (387)
T ss_pred HHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCc------ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCc
Confidence 888888898 8999998764 46999999988753 23456666677788876 458889999999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
++++ +|....+-..+ ..+ +.... +... .+.+..+++|.++.| .-+|.++..+ .++..... ...|..
T Consensus 194 ~li~De~y~~~~~~~~~-~~~-~~~~~--~~~~-~~i~~~S~SK~~g~~GlRiG~~~~~~-~l~~~~~~-~~~~~~---- 262 (387)
T PRK07777 194 LVITDEVYEHLVFDGAR-HLP-LATLP--GMRE-RTVTISSAAKTFNVTGWKIGWACGPA-PLIAAVRA-AKQYLT---- 262 (387)
T ss_pred EEEEeccchhcccCCCC-ccc-HhhCC--CCcC-cEEEEeechhhccCcCceeEEEecCH-HHHHHHHH-HHhhcc----
Confidence 9999 66543321110 000 00111 1222 678899999999866 3367776544 33332211 011110
Q ss_pred CCCcccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE-EeeC
Q psy1785 477 FYDTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF-WYIP 554 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F-~~~p 554 (629)
+ ..+... .++..| +. .+..-+++..+...+..+++.+.|++. ++++. +|..+.+.+ ++.+
T Consensus 263 ----------~--~~~~~~q~~~~~~--l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~g~~~~~~~~~~ 324 (387)
T PRK07777 263 ----------Y--VGGAPFQPAVAHA--LD-HEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVH--DSAGTYFLCADPRP 324 (387)
T ss_pred ----------c--CCCCHHHHHHHHH--Hh-CCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc--CCCcceEEEecccc
Confidence 0 001111 111111 21 233445556667777888999999886 77754 354443332 2221
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeec----CCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPI----HALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~----~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.+. . + ..++.+.|. +.|..+.....+ ....+++|++++ . ++++++..++.|+++.
T Consensus 325 ~~~--~-~-----------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~-~--~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 325 LGY--D-D-----------GTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC-K--RDDTLDEAIRRLRALR 384 (387)
T ss_pred cCC--C-C-----------HHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec-C--CHHHHHHHHHHHHHHh
Confidence 110 0 0 125666775 457654332222 112358999996 2 5889998888887754
No 212
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.20 E-value=4.3e-08 Score=106.66 Aligned_cols=303 Identities=10% Similarity=0.033 Sum_probs=179.7
Q ss_pred hhHHHHHHHHHHHHHHHhCC--CC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGF--QG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA 329 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~--~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa 329 (629)
+....+-+.+.+++.+-.|+ +. .+.++|+|++++...++.+.. .|...|++..-++..+...+
T Consensus 69 ~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~--------------~~Gd~Vlv~~P~y~~~~~~~ 134 (399)
T PRK07681 69 SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYA--------------NPGDIILVPDPGYTAYETGI 134 (399)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhC--------------CCCCEEEECCCCccchHHHH
Confidence 34445555666666665565 33 468889998887655443321 13445666777788888888
Q ss_pred HHcCCCCCCEEEEecCCCC--CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE-
Q psy1785 330 AFEGLGSDNVYLIKTDARG--RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV- 403 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~~g--~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV- 403 (629)
...|. +++.||.++++ .+|+++|++++.. .+.+|+.+...+.+|.+-+ +.+|.++|+++++++.+
T Consensus 135 ~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~D 205 (399)
T PRK07681 135 QMAGA---TSYYMPLKKENDFLPDLELIPEEIAD------KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHD 205 (399)
T ss_pred HhcCC---EEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEe
Confidence 99998 99999998653 6799999887753 2446777777899999877 77788889999999998
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK 481 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 481 (629)
+|.....-..+ ...++... +... -..+..++.|.++.| +-+|.++. ++.+........ .+..
T Consensus 206 e~y~~~~~~~~~--~~~~~~~~--~~~~-~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~~~~~~~-~~~~--------- 269 (399)
T PRK07681 206 FAYAEFYFDGNK--PISFLSVP--GAKE-VGVEINSLSKSYSLAGSRIGYMIG-NEEIVRALTQFK-SNTD--------- 269 (399)
T ss_pred ccchhheeCCCC--CCChhhCC--CCcc-cEEEEeecccccCCccceeEEEec-CHHHHHHHHHHH-hhcc---------
Confidence 66643321110 00000100 0111 245667889999744 44787765 444444321100 0000
Q ss_pred cCCCCccCCCCCCcchHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCC
Q psy1785 482 YDSGDKHIQCGRKPDVLKFWFMWKAK--GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRG 559 (629)
Q Consensus 482 ~~~~~~~~~~sr~~~al~~w~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~ 559 (629)
. + ...+..+++...+ +..-+++..+...+..+++.+.|++. |+++.. |.-+.+++--.|+...
T Consensus 270 -------~-~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--p~~g~f~~~~l~~~~~- 334 (399)
T PRK07681 270 -------Y-G---VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDK--PAGSMFVWAEIPKGWT- 334 (399)
T ss_pred -------c-C---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC--CCeeeEEEEECCCCCC-
Confidence 0 0 1111122222222 23345555566667788899999887 887543 4444443322232211
Q ss_pred CCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 560 KEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 560 ~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..++.+.+.+ .|..+........ ..+++|++++ .++++++..++.|++.+
T Consensus 335 --------------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~~~~~l~~l~~~~ 386 (399)
T PRK07681 335 --------------SLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV---QDEEVLQQAVENIRNSG 386 (399)
T ss_pred --------------HHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHHHHhc
Confidence 0245666666 6765443322221 2358999996 35899999999998854
No 213
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.20 E-value=1e-08 Score=109.71 Aligned_cols=287 Identities=9% Similarity=0.075 Sum_probs=175.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+.++.+++.++++..+.++|+|++++...++.+ . . +. .|++..-+...+..++...|. ++
T Consensus 57 ~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~-~-~-------------~~-~v~i~~P~y~~~~~~~~~~g~---~~ 117 (354)
T PRK06358 57 LELRKRIASFEQLDLENVILGNGATELIFNIVKV-T-K-------------PK-KVLILAPTFAEYERALKAFDA---EI 117 (354)
T ss_pred HHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHH-h-C-------------CC-cEEEecCChHHHHHHHHHcCC---ee
Confidence 4666778888898888999999999987655443 1 1 22 233444455556677888898 89
Q ss_pred EEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCcccccc
Q psy1785 340 YLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLT 412 (629)
Q Consensus 340 ~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~ 412 (629)
+.++.+.+ ..+| +++.+.+.. .+.+|+.+...+.+|.+-+ +.+|.++|+++++++.+ +|.....-.
T Consensus 118 ~~~~~~~~~~~~~d-~~~~~~~~~------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~ 190 (354)
T PRK06358 118 EYAELTEETNFAAN-EIVLEEIKE------EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN 190 (354)
T ss_pred EEEeCccccCCCcc-HHHHHhhcc------CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc
Confidence 99998754 3688 555554422 2445666788899998876 77777889999999999 665433211
Q ss_pred ccccccccccccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCC
Q psy1785 413 APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 491 (629)
Q Consensus 413 ~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 491 (629)
.+ .+.+-... .... + .+..++-|.++. -.-+|.++..++.+.......... +
T Consensus 191 ~~--~~~~~~~~--~~~~-v-i~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~-----------------~---- 243 (354)
T PRK06358 191 ET--ISMINYLE--NFKN-L-IIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREP-----------------W---- 243 (354)
T ss_pred cc--hhHHHhcc--CCCC-E-EEEEechhhccCcchhheeeecCCHHHHHHHHHhCCC-----------------C----
Confidence 10 01000000 0111 2 567889999984 455888876544433322111100 0
Q ss_pred CCCcchHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 492 GRKPDVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 492 sr~~~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
....+..+++..++.... +++..+...+..+.+.+.|++.+++++. +|..+-+.+++ |+.
T Consensus 244 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~g~f~~~~~-~~~-------------- 304 (354)
T PRK06358 244 --SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY--KPSVNFIFFKL-EKP-------------- 304 (354)
T ss_pred --cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc--CCcceEEEEEc-Cch--------------
Confidence 112233334444443333 3666777777888999999988887654 35554332322 110
Q ss_pred hhHHHHHHHHHHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 571 HKVAPKIKERMMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 571 ~~~~~~i~~~l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.++.++|.++|..+.....+.+ ..+++|+++. ++++.++|+++|+++.
T Consensus 305 ----~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 305 ----IDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL 353 (354)
T ss_pred ----HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 2567788888865544333322 2368999997 7899999999998764
No 214
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.20 E-value=3.8e-09 Score=112.02 Aligned_cols=307 Identities=15% Similarity=0.097 Sum_probs=184.7
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCC-chhhHHHHHHHHHHhhchhHHhcCCCCCCCeE-EEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPG-GSMANGYAISCARHHAFPQIKTQGLASCPRLV-LYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~G-gT~an~~al~~ar~~~~~~~~~~G~~~~p~~v-v~~s~~~H~Si 325 (629)
...+|.+..+-.++.+.++++++.|+ ....|..| ||.+ +.|+..-.-. .| .+.+ ++.++.--.-+
T Consensus 41 sHRs~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~-~ea~~~Nll~-------~g----~~~~~~~~tG~fg~r~ 108 (364)
T PRK12462 41 SHRSSWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQ-FSMIPMNFSR-------PG----AAAPEYVTTGYWSRKA 108 (364)
T ss_pred ccccHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHH-HHHHHHHcCC-------CC----CcEEEEEeCCHHHHHH
Confidence 34688999999999999999999975 56667666 5554 4443332211 11 1222 23333221224
Q ss_pred HHHHHHcCCCCCCEEEEecCC----CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDA----RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMAD 401 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~----~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~l 401 (629)
.+-|+.+| ++..+...+ ....+++.++ +.. ..-.|..++..|.+|...| ++.+.++..+
T Consensus 109 ~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~~--~~~------d~~~v~~t~NETstGv~~~-----~~~~~~~~ll 171 (364)
T PRK12462 109 IGEASRVA----AMRVVWDGAASGYRTLPSLAELD--WDA------RAPFRHYVSNETVEGLQFP-----DAAGLPDSPL 171 (364)
T ss_pred HHHHHhcC----CceEecCcCCCCCCcCCCHHHhc--cCC------CCcEEEEccCCCCceEecC-----cccccCCCeE
Confidence 44455455 355444211 1244555441 111 1346888999999999875 3333357776
Q ss_pred EE-ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 402 SV-TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 402 hV-A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
.| +.... .+.|+ .++. .|.+....||.+| |.|.+++++|++ ++.+.....+.|+.-..
T Consensus 172 vvD~sS~~--~s~pi-----------d~~~-~dvi~agsQKnlg-P~Gltvvivs~~-al~~~~~~~p~~ldy~~----- 230 (364)
T PRK12462 172 IADMSSDF--MSRPF-----------DVEA-YGMVYAHAQKNLG-PAGVTVAIIRRA-LLERVPDTLPPMLDFRT----- 230 (364)
T ss_pred EEEcCchh--hCCCC-----------ChHH-ccEEEeeccccCC-CCceEEEEECHH-HHhhccccCCchhhHHH-----
Confidence 66 33331 22221 1445 7999999999999 999999999986 44443222233332000
Q ss_pred ccCCCCccCCCCCC-cchHHHHHHHHhcChh--hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC---CCceEEEEEeeC
Q psy1785 481 KYDSGDKHIQCGRK-PDVLKFWFMWKAKGTD--GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE---PECTNISFWYIP 554 (629)
Q Consensus 481 ~~~~~~~~~~~sr~-~~al~~w~~l~~~G~~--G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~---p~~~~v~F~~~p 554 (629)
..+-. .+.. +-+ +..+.+-.+++.+-.+ |++++.+++.+.|+.+++.|.+.++|.....+ ....+|||++..
T Consensus 231 ~~~~~-s~~n-TPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~ 308 (364)
T PRK12462 231 HVEHR-SNYN-TPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ 308 (364)
T ss_pred HHhcC-CCCC-CchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC
Confidence 00000 0000 111 1334444556666566 99999999999999999999999877544212 446789998632
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+ + | ..++.+...++|.+-+.+. +. .+-+|+++- ...+.|+++.|++-+++..+
T Consensus 309 ~---------~----l---~~~f~~~a~~~gl~~lkGh--r~-vgg~Ras~y-na~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 309 P---------R----L---DTLFKEQSTEAGFCGLSGH--RS-IGGIRASLY-NAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred H---------H----H---HHHHHHHHHHCCCccccCC--cc-cCceEEEcC-CCCCHHHHHHHHHHHHHHHH
Confidence 1 1 2 2367777888896543321 11 234999996 78899999999999988765
No 215
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=1.7e-08 Score=109.20 Aligned_cols=314 Identities=14% Similarity=0.107 Sum_probs=194.3
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|....+...+-+.+.+++.+-.|.+ .. +.++|.|+++++..++.+-.. |...|++..-...+.
T Consensus 61 Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~--------------pGDeVlip~P~Y~~y 126 (393)
T COG0436 61 YTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLN--------------PGDEVLIPDPGYPSY 126 (393)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEeCCCCcCH
Confidence 3355666777788888888888744 33 499999999998877776543 333455666666677
Q ss_pred HHHHHHcCCCCCCEEEEecC---CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCC
Q psy1785 326 KKLAAFEGLGSDNVYLIKTD---ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDM 399 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d---~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~ 399 (629)
.....+.|- +++.|+++ .+..+|++.|+++|.. ++.+|+.+..+|-+|++- .+++|+++|++|++
T Consensus 127 ~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i 197 (393)
T COG0436 127 EAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITP------KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDI 197 (393)
T ss_pred HHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCc------cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCe
Confidence 788899998 99999975 3689999999999987 355899999999999985 47888889999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
|+.. +|.....-.. .-.+ .+.... . ..--...-+..|..+.+ .=+|.+...++.+..... .+.+
T Consensus 198 ~ii~DEiY~~l~yd~~-~~~s-~~~~~~--~-~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~-----~~~~--- 264 (393)
T COG0436 198 IIISDEIYEELVYDGA-EHPS-ILELAG--A-RDRTITINSFSKTYGMTGWRIGWVVGPPEELIAALR-----KLKS--- 264 (393)
T ss_pred EEEEehhhhhcccCCC-CcCC-HhhcCC--C-cceEEEEecccccccccccceeEeecChHHHHHHHH-----HHHH---
Confidence 9988 6655433210 0000 001110 0 10123344778988865 337777776444443321 1111
Q ss_pred CCCcccCCCCccCCCCCCcchHHHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCC
Q psy1785 477 FYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKG-TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPP 555 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G-~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~ 555 (629)
.+..|...+.-.++-.+|+.-. ...+++..+...+.++.+.+.|.+++|+++.. +|.-....|--.|.
T Consensus 265 ----------~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~-~p~Ga~Y~~~~i~~ 333 (393)
T COG0436 265 ----------YLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVK-PPEGAFYLFPKIPE 333 (393)
T ss_pred ----------hcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-CCCeeEEEEeecCC
Confidence 0111332322122222232211 13455555677788999999999998899875 57666655543332
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHHHHhc-CcEEEeeeecCC--ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKERMMKS-GSMMITYQPIHA--LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~~~~~--~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
. .+. .++...|.++ |.+.+.+..... ..+++|++++ ++.++++..++.|++..+
T Consensus 334 ~----~d~-----------~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~---~~~~~l~~a~~rl~~~~~ 390 (393)
T COG0436 334 L----LDS-----------EEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA---TSEETLEEALRRLARFLA 390 (393)
T ss_pred C----CCH-----------HHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe---cCHHHHHHHHHHHHHHHH
Confidence 2 111 2345555555 554443333221 1258999986 233888888888877654
No 216
>PRK07505 hypothetical protein; Provisional
Probab=99.20 E-value=2.8e-08 Score=108.24 Aligned_cols=301 Identities=10% Similarity=0.048 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG 335 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg 335 (629)
.....++.+.+++++|. ..++.++|+++|..++..++.... ..| ...+|+.....|.|+.....+..-+
T Consensus 90 ~~~~~~l~~~la~~~~~---~~~~~~sG~~a~~~ai~~~~~~~~----~~~----~~~vi~~~~~~H~s~~~~~~~~~~~ 158 (402)
T PRK07505 90 SQILKDLEEALSELFGA---SVLTFTSCSAAHLGILPLLASGHL----TGG----VPPHMVFDKNAHASLNILKGICADE 158 (402)
T ss_pred hHHHHHHHHHHHHHhCC---CEEEECChHHHHHHHHHHHHhccc----CCC----CCCEEEEchhhhHhHHhhhhhhhcC
Confidence 34556677788888886 567677788999888877654211 011 2346677889999875433322111
Q ss_pred CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccc--c
Q psy1785 336 SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKL--L 411 (629)
Q Consensus 336 ~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l--~ 411 (629)
.+++.+|. .|+++|++++.. + +..++.+.+.+.+|.+.|+++|.++|+++++++++ +++...+ .
T Consensus 159 -~~v~~~~~-----~d~~~l~~~~~~----~--~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~ 226 (402)
T PRK07505 159 -TEVETIDH-----NDLDALEDICKT----N--KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKN 226 (402)
T ss_pred -CeEEEeCC-----CCHHHHHHHHhc----C--CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCC
Confidence 27777875 388899887753 1 23566667778889999999999999999999999 6532111 1
Q ss_pred ccccccccccccccccc-CCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCC
Q psy1785 412 TAPQQCSVFLTRRNYVI-EVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 490 (629)
Q Consensus 412 ~~~~~~~~~l~~~~~~i-~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 490 (629)
...+ .....+. ......++.++-|.++.+ .|.+++.+++...........|. ..
T Consensus 227 g~~~------~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t-----------------~~ 281 (402)
T PRK07505 227 GEGY------VRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLA-----------------FS 281 (402)
T ss_pred CCch------HHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCce-----------------eC
Confidence 1100 0011122 111356667889998865 35555545444332211111111 11
Q ss_pred CCCC-cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHH
Q psy1785 491 CGRK-PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNEL 569 (629)
Q Consensus 491 ~sr~-~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~ 569 (629)
.+.. .....+..++..+..+.+.+..++..+..+++.+.+... .. .+.+.++.+.. +. ..
T Consensus 282 ~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~-g~~~~i~~~~~-~~--------~~---- 342 (402)
T PRK07505 282 QSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QS-GSFLPIRLIYI-GD--------ED---- 342 (402)
T ss_pred CCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CC-CCCCCEEEEEe-CC--------HH----
Confidence 1222 233334455554555666655555544444443332211 11 12233222221 10 00
Q ss_pred HhhHHHHHHHHHHhcCcEEEeee--ecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 570 LHKVAPKIKERMMKSGSMMITYQ--PIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 570 l~~~~~~i~~~l~~~G~~~i~~~--~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
...++.++|.++|.+..... ......++||+++. ...|++|++.+++.|+++.+
T Consensus 343 ---~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 343 ---TAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred ---HHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHH
Confidence 12367888889997543211 11111258999996 89999999999999988754
No 217
>PRK07908 hypothetical protein; Provisional
Probab=99.20 E-value=5.7e-09 Score=111.39 Aligned_cols=281 Identities=11% Similarity=0.120 Sum_probs=170.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+.++++++.+|.+..+.++|+|++++...++. . . |..+++. .-+.......++..|+ ++
T Consensus 61 ~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~--l-~-------------~~~viv~-~P~y~~~~~~~~~~G~---~i 120 (349)
T PRK07908 61 RRARAAVAARHGRTPDEVLLLAGAAEGFALLAR--L-R-------------PRRAAVV-HPSFTEPEAALRAAGI---PV 120 (349)
T ss_pred HHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh--c-C-------------CCeEEEe-CCCChHHHHHHHHcCC---EE
Confidence 445667788888888899999999998765443 1 1 2223333 2333344567788898 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
+.+|+++++.+|++.|++ .+.+|+.+..++.+|.+-|.++|.++|++ +.++++ +|.-.. ...+.
T Consensus 121 ~~v~~~~~~~~d~~~l~~----------~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~-~~~~~-- 186 (349)
T PRK07908 121 HRVVLDPPFRLDPAAVPD----------DADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAV-PGEPE-- 186 (349)
T ss_pred EeeccCcccCcChhHhcc----------CCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhc-cCCcc--
Confidence 999998778899875421 13356667889999999999999999974 778888 665421 11100
Q ss_pred cccccccccccCCcceEEEe-CCCCCCC-CCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 418 SVFLTRRNYVIEVVADSVTW-NPHKLLT-APQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~-~~HK~l~-~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
... .... -+.+++ +++|.++ ...-+|.++... ..+......... ++. ++...
T Consensus 187 ----~l~--~~~~-~~~i~i~S~SK~~~l~GlRiG~~~~~~-~~~~~~~~~~~~------------~~~------~~~~~ 240 (349)
T PRK07908 187 ----SLA--GDDL-PGVLVLRSLTKTWSLAGLRVGYALGAP-DVLARLTRGRAH------------WPV------GTLQL 240 (349)
T ss_pred ----ccc--cccC-CCEEEEeecccccCCccceeeeeecCH-HHHHHHHhcCCC------------CCc------cHHHH
Confidence 000 0122 245554 8999887 445578888644 444432111000 000 01011
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
.++..| ++..+..-+++..++..+..+++.+.|++. ++++.. ++..+.+.+++ |. ..
T Consensus 241 ~a~~~~--~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~-p~~g~~~~~~~-~~------------------~~ 297 (349)
T PRK07908 241 EAIAAC--CAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVD-PAAAPFVLVRV-PD------------------AE 297 (349)
T ss_pred HHHHHH--hcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEecc-CCCceEEEEEC-Cc------------------HH
Confidence 112111 111122345666777788888999999987 888654 34444344432 11 02
Q ss_pred HHHHHHHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 576 KIKERMMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+.+.|.++|..+.......+ ..+++|+++. +++|+++|+++|+++..
T Consensus 298 ~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~----~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 298 LLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR----PRAEVPVLVQALAEILK 346 (349)
T ss_pred HHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC----CCccHHHHHHHHHHHHh
Confidence 456677788865544333322 2469999995 67899999999998754
No 218
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.19 E-value=1e-08 Score=110.49 Aligned_cols=312 Identities=12% Similarity=0.136 Sum_probs=176.6
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF 331 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~ 331 (629)
.|...++| +++++.+|.+ ..++++|||.+...++.+. ++ .|...|+++..+|.+...++..
T Consensus 30 g~~~~~~e----~~la~~~g~~--~~v~~~sgt~aL~~~l~al-----------~~--~pGd~Viv~~~t~~~~~~~~~~ 90 (376)
T TIGR02379 30 GPFSRRCE----TWLENRTGTK--KALLTPSCTAALEMAALLL-----------DI--QPGDEVIMPSYTFVSTANAFVL 90 (376)
T ss_pred cHHHHHHH----HHHHHHhCCC--eEEEeCCHHHHHHHHHHHc-----------CC--CCcCEEEECCCCcHHHHHHHHH
Confidence 44444444 4566667764 6899999999866555432 11 2555688899999999999999
Q ss_pred cCCCCCCEEEEecCCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 332 EGLGSDNVYLIKTDAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 332 lGlg~~~v~~V~~d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
.|. +++.|+++++ +.+|+++|++++.. .+.+|+.+ +.+|..-|+++|.++|+++|+++++ +++.+
T Consensus 91 ~G~---~~v~vd~d~~~~~~d~~~le~~i~~------~tk~Iip~---~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g 158 (376)
T TIGR02379 91 RGA---KIVFVDIRPDTMNIDETLIESAITH------RTKAIVPV---HYAGVACDMDTIMALANKHQLFVIEDAAQGVM 158 (376)
T ss_pred cCC---EEEEEecCCCcCCCCHHHHHHhcCc------CceEEEEe---CCCCCccCHHHHHHHHHHCCCEEEEECccccC
Confidence 998 9999999976 57999999988854 24455443 4568888999999999999999999 44332
Q ss_pred ccccccccccccccccccc-cCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 409 KLLTAPQQCSVFLTRRNYV-IEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~-i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
.... .+..| +-. +.++++.+-|.+..-...|++++.++++..+..... .+=...........+...
T Consensus 159 ~~~~----------~~~~g~~~~-~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~- 225 (376)
T TIGR02379 159 STYK----------GRALGSIGH-LGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIR-EKGTNRSQFFRGEVDKYT- 225 (376)
T ss_pred CccC----------CcccCCCCC-EEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHH-HhCCCCccccccCCCcce-
Confidence 2111 11111 112 445555555666432246788888766555432111 000000000000000000
Q ss_pred cCCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC--C-cEEEccCCCc----eEEEEEeeCCCCC
Q psy1785 488 HIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP--G-FKLVLDEPEC----TNISFWYIPPSLR 558 (629)
Q Consensus 488 ~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~--g-~~l~~~~p~~----~~v~F~~~p~~~~ 558 (629)
....+.++ .-+.+-..+.. .+-+.+.+++..+++++..+.|..++ + .++...++.. ..+++++.+ ..
T Consensus 226 ~~~~g~n~~~~~~~Aa~g~~q--L~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~- 301 (376)
T TIGR02379 226 WRDIGSSYLPSELQAAYLWAQ--LEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKD-ED- 301 (376)
T ss_pred eeeecccCCccHHHHHHHHHH--HHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECC-cC-
Confidence 00112222 22222222221 24567778888888888999987764 2 2221101111 122233211 10
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEE-EeeeecCCc--------------------cceEEEeecCCCCCHHHHHH
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMM-ITYQPIHAL--------------------PNFFRLVLQNSALDHSDMDY 617 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~-i~~~~~~~~--------------------~~~lR~~~~n~~~t~edid~ 617 (629)
+ ..++.+.|.++|... +.+.++... ...|.+-+ ++..|++|+++
T Consensus 302 ------------~--r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~-~~~l~~~~~~~ 366 (376)
T TIGR02379 302 ------------D--RNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL-YYGLSKEDQAR 366 (376)
T ss_pred ------------C--HHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC-CCCCCHHHHHH
Confidence 0 136777888888531 112111100 12455555 69999999999
Q ss_pred HHHHHHHHh
Q psy1785 618 FIDEIERLG 626 (629)
Q Consensus 618 l~~~i~~l~ 626 (629)
+++.|++..
T Consensus 367 i~~~i~~~~ 375 (376)
T TIGR02379 367 VIQTICDYL 375 (376)
T ss_pred HHHHHHHHh
Confidence 999998753
No 219
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.19 E-value=1.5e-08 Score=110.39 Aligned_cols=297 Identities=13% Similarity=0.135 Sum_probs=173.5
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC------
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG------ 333 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG------ 333 (629)
.++.+.+++++|. ...+++++||+|+..|+.++|.... .+.|.+.....++..+..-|-+..-+..+.+
T Consensus 86 ~~l~~~l~~~~~~--~~~~~~~SGs~A~e~al~~a~~~~~---~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~ 160 (401)
T PRK00854 86 APLYEELAALTGS--HKVLPMNSGAEAVETAIKAVRKWGY---EVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARG 160 (401)
T ss_pred HHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHHHHHHHHH---hccCCCCCCceEEEECCCcCCccHHHHhccCCccccc
Confidence 3344456777775 3789999999999999999986411 1123321113466677777876544332211
Q ss_pred -C--CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--e
Q psy1785 334 -L--GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 334 -l--g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A 404 (629)
. ...++..+| ..|+++|++.|.+ .+.+|+.....+.+|.+-| +++|+++|++||+++.+ +
T Consensus 161 ~~~~~~~~~~~~~-----~~d~~~le~~i~~------~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv 229 (401)
T PRK00854 161 GFGPFTPGFRVVP-----FGDAEALEAAITP------NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEI 229 (401)
T ss_pred cCCCCCCCeEEeC-----CCCHHHHHHHhCC------CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 0 011344444 2478899888753 3557777778888898877 99999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+.+...... .+ .....++ ..|.++++ |+++.-+ ..|+++.+++ .... +.. ....
T Consensus 230 ~~g~g~~g~--~~----~~~~~g~--~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~~~-l~~----~~~~--------- 284 (401)
T PRK00854 230 QTGLGRTGK--LL----AEEHEGI--EADVTLIG--KALSGGFYPVSAVLSNSE-VLGV-LKP----GQHG--------- 284 (401)
T ss_pred hhCCCCCch--Hh----HHhhcCC--CCCEEEec--ccccCCccCeEEEEEcHH-HHhc-ccC----CCCC---------
Confidence 654211110 00 0011122 26777775 8987653 4677776553 3321 110 0000
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCCCCCc
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~~~~~ 562 (629)
.+ -++.+.....+..+|+.+..++ ..++..++++++.+.|++. ++..+.. .+....+.|.+.++..
T Consensus 285 ---~t-~~~~~~~~aa~~a~L~~l~~~~---~~~~~~~~~~~l~~~L~~~-~~~~~~~~~g~g~~~~i~~~~~~~----- 351 (401)
T PRK00854 285 ---ST-FGGNPLACAVARAALKVLTEEG---MIENAAEMGAYFLEGLRSI-RSNIVREVRGRGLMLAVELEPEAG----- 351 (401)
T ss_pred ---CC-CCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHhh-ccCceEEEeccceEEEEEEecCch-----
Confidence 01 1222233333444444433222 4567777889999999886 3332220 2334445554433210
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
...++.+.|.++|..+ .. .+ .+.+|+++. ..+|++|||.+++.|+++.
T Consensus 352 ----------~~~~~~~~L~~~GV~v-~~---~~-~~~lR~~p~-~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 352 ----------GARQYCEALKERGLLA-KD---TH-DHTIRLAPP-LVITREQVDWALEQIAKVL 399 (401)
T ss_pred ----------hHHHHHHHHHHCCeEE-ec---CC-CCEEEEeCC-cccCHHHHHHHHHHHHHHh
Confidence 0135778888888643 21 12 258999994 7899999999999998764
No 220
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.18 E-value=9.8e-09 Score=110.72 Aligned_cols=217 Identities=12% Similarity=0.146 Sum_probs=144.4
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHH---
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKK--- 327 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~k--- 327 (629)
..|....+|+. ++.+-|- ...+++++|+.|+..++.+.. .|...|+++...+.+...
T Consensus 62 gnPt~~~Le~~----la~le~~--~~~v~~sSG~aAi~~~l~all--------------~~GD~Vlv~~~~Y~~~~~l~~ 121 (395)
T PRK05967 62 GTPTTDALCKA----IDALEGS--AGTILVPSGLAAVTVPFLGFL--------------SPGDHALIVDSVYYPTRHFCD 121 (395)
T ss_pred CChHHHHHHHH----HHHHhCC--CCEEEECcHHHHHHHHHHHhc--------------CCCCEEEEccCCcHHHHHHHH
Confidence 34655455444 5555442 346777778777665554332 144567777777776553
Q ss_pred -HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 328 -LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 328 -aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
.+...|+ ++..++.+ +.+.|+++|.+ .+.+|.....++.++.+.||++|+++|+++|+++.| +
T Consensus 122 ~~l~~~Gi---~v~~vd~~-----~~e~l~~al~~------~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t 187 (395)
T PRK05967 122 TMLKRLGV---EVEYYDPE-----IGAGIAKLMRP------NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNT 187 (395)
T ss_pred HHHHhcCe---EEEEeCCC-----CHHHHHHhcCc------CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECC
Confidence 4566787 88887542 34567776653 356888998889999999999999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|...... .| ++.|||.+.-+..|++++.-+ .|++ +.++........ ...
T Consensus 188 ~a~p~~~-~p-------------l~~GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~~l~~-----~~~--------- 238 (395)
T PRK05967 188 WATPLYF-RP-------------LDFGVDISIHAATKYPSGHSDILLGTV-SANEKCWPQLLE-----AHG--------- 238 (395)
T ss_pred ccCceec-Ch-------------hHcCCCEEEEecccccCCCCCeeEEEE-EcCHHHHHHHHH-----HHH---------
Confidence 7653322 21 456899999999999765322 4544 444333222110 000
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
..|-......+|+.++ |.+-+.-++++..++|..+++.|++.|.++-+
T Consensus 239 -------~~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V 286 (395)
T PRK05967 239 -------TLGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARV 286 (395)
T ss_pred -------HcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEE
Confidence 0122345677787665 77888889999999999999999999988544
No 221
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.18 E-value=1.8e-08 Score=109.52 Aligned_cols=293 Identities=13% Similarity=0.100 Sum_probs=170.1
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.+..+.++++.+. ....|+++||+||..|+..||.... ...|.......+|...+.-|-+..-+..+.+-.
T Consensus 85 ~~l~~~l~~~~~~--~~~~~~~SGseA~e~Alk~a~~~~~---~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 159 (396)
T PRK04073 85 GPWYEKVAKLTGK--DMVLPMNTGAEAVETAIKAARRWAY---DVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKR 159 (396)
T ss_pred HHHHHHHHhcCCC--CeEEEcCChHHHHHHHHHHHHHHhh---hccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccccc
Confidence 3344556666654 4689999999999999999986421 112321112346667777887776665554410
Q ss_pred -----CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--e
Q psy1785 336 -----SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 336 -----~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A 404 (629)
...+..+|.+ |+++|++.+.+ ...+|+.....+.+|.+-| +++|+++|+++|+++++ +
T Consensus 160 ~~~~~~~~~~~~~~~-----d~~~l~~~i~~------~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv 228 (396)
T PRK04073 160 GFGPMLPGIKKIPYG-----DLEALKAAITP------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEI 228 (396)
T ss_pred CCCCCCCCceEeCCC-----CHHHHHHhccc------CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 0123344432 77888887743 2456777777777888755 89999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+.+...-...+.+ ... ++ . .|.+++ .|.++.+ +..|.++.++ +..+.. .. ...
T Consensus 229 ~~g~g~~g~~~~~----~~~--~~-~-pdi~~~--sK~lg~gg~~ig~~~~~~-~i~~~~-~~----~~~---------- 282 (396)
T PRK04073 229 QTGLGRTGKLFAC----DWD--NV-T-PDMYIL--GKALGGGVFPISCVAANR-DILGVF-TP----GSH---------- 282 (396)
T ss_pred hhCCCcCcHHHHh----hhc--CC-C-CCEEEe--cccccCCCCcceEEEEcH-HHHhhh-cC----CCC----------
Confidence 6553211100000 111 12 2 687776 5998876 5678887754 333321 10 000
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCCCCCc
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~~~~~ 562 (629)
.. + -++.+......-.+|+.+-.+++ .++..++.++|.+.|+++ +...+.+ .+.-..+.+.+..
T Consensus 283 ~~--t-~~~~~~~~aaa~aaL~~~~~~~l---~~~~~~~~~~l~~~L~~l-~~~~i~~~~~~g~~~~~~~~~-------- 347 (396)
T PRK04073 283 GS--T-FGGNPLACAVSIAALEVLEEEKL---PERSLELGEYFKEQLKEI-DNPMIKEVRGRGLFIGVELNE-------- 347 (396)
T ss_pred CC--C-CCCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhh-cCCcccceecceEEEEEEecc--------
Confidence 00 1 12222222233344444333443 455666899999999886 3222221 1222333333211
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
. ...+.++|.++|.++ .. . + .++||+++. ...|++|||++++.|+++
T Consensus 348 ~----------~~~~~~~l~~~Gv~~-~~--~-~-~~~iRi~p~-l~~t~e~i~~~~~~l~~~ 394 (396)
T PRK04073 348 P----------ARPYCEALKEEGLLC-KE--T-H-ETVIRFAPP-LVITKEELDWAFEKIKAV 394 (396)
T ss_pred h----------HHHHHHHHHHCCeEE-ec--C-C-CCEEEEECC-cccCHHHHHHHHHHHHHH
Confidence 0 135677788888653 22 1 2 258999984 789999999999999876
No 222
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.17 E-value=3.9e-08 Score=107.09 Aligned_cols=301 Identities=13% Similarity=0.129 Sum_probs=171.2
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCc-chHHHHHHHHcCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDA-HYSIKKLAAFEGL---- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~-H~Si~kaa~~lGl---- 334 (629)
.++.+.+++++|. ....++++|+++|..|+..||.... ++.|+.. .+.+|++.... |-+...+..+.+-
T Consensus 82 ~~l~~~l~~~~~~--~~~~~~~SGs~A~e~ai~~a~~~~~---~~~~~~~-~~~~i~~~~~~yhg~~~~~~~~~~~~~~~ 155 (401)
T TIGR01885 82 GEFAEYVTKLFGY--DKVLPMNTGAEAVETAIKLARKWGY---KVKGIPE-NQAIIVSAKGNFHGRTLGAISMSTDPDSR 155 (401)
T ss_pred HHHHHHHHhhcCC--CEEEEeCccHHHHHHHHHHHHHHhh---hhcCCCC-CCCEEEEECCCcCcccHHHHhCcCCcccc
Confidence 4455567777775 3679999999999999999987521 1223221 23345544444 6665555554331
Q ss_pred ---C--CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--
Q psy1785 335 ---G--SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV-- 403 (629)
Q Consensus 335 ---g--~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV-- 403 (629)
| ...+..+|.+ |+++|++.|++. +.....|+.-...+..|.+-| |++|+++|++|++++++
T Consensus 156 ~~~~~~~~~~~~~~~~-----d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DE 227 (401)
T TIGR01885 156 TNFGPYVPGFKKIPYN-----NLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADE 227 (401)
T ss_pred cccCCCCCCceEeCCC-----CHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 1 0134444432 688999888642 222333444333445577776 99999999999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
++.+...... ++.....++ ..|.++++ |.++.. ...|.++.++ ++.... .. .+.
T Consensus 228 v~~g~g~~G~------~~~~~~~~~--~~di~~~g--K~l~~g~~~ig~v~~~~-~i~~~~-~~--~~~----------- 282 (401)
T TIGR01885 228 IQTGLGRTGK------LLCVDHENV--KPDIVLLG--KALSGGVYPVSAVLADD-DVMLTI-KP--GEH----------- 282 (401)
T ss_pred hhhCCCccch------hhHHhhcCC--CCCEEEee--ccccCCCCCcEEEEEcH-HHHhhc-cC--CCC-----------
Confidence 5443211111 000111122 36888876 988764 3466676653 343321 10 000
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCCCCC
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLRGKE 561 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~~~~ 561 (629)
..+ .++.+.....+..+++.+..+++. ++..+++++|++.|+++ +..++.+ .+.-..+.+.+.++.. +
T Consensus 283 ---~~t-~~~~p~~~~aa~a~L~~i~~~~l~---~~~~~~~~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~~~~~-~-- 351 (401)
T TIGR01885 283 ---GST-YGGNPLACAVAVAALEVLEEEKLA---ENAEKLGEIFRDQLKKL-PKPIITEVRGRGLLNAIVIDESKT-G-- 351 (401)
T ss_pred ---CCC-CCCCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHhc-cCCceeEEeecCeeEEEEeccCcc-h--
Confidence 001 123344444455566665444443 56667899999999987 3333320 1222233333321110 0
Q ss_pred chhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 562 DQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 562 ~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
....++.+.|.++|.++ .+ .. .+.+|++++ ..+|++||+.+++.|++..
T Consensus 352 ----------~~~~~l~~~l~~~Gv~v-~~--~~--~~~lRi~p~-l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 352 ----------RTAWDLCLKLKEKGLLA-KP--TH--GNIIRLAPP-LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ----------hHHHHHHHHHHhCCEEE-Ee--cC--CCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence 01246788888898643 32 11 358999995 8899999999999998763
No 223
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.17 E-value=1.2e-08 Score=109.80 Aligned_cols=288 Identities=10% Similarity=0.096 Sum_probs=177.6
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEE
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVY 340 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~ 340 (629)
+..+.+++.+|++..+.++|+|++++...++.+.. .|...|++..-++......++..|+ +++
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~--------------~~gd~vli~~P~y~~~~~~~~~~g~---~~~ 137 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSEDLIAVICRAVL--------------RPGDRVVTLYPSFPLHEDYPTMMGA---RVE 137 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhc--------------CCCCEEEEcCCChHHHHHHHHHcCC---eEE
Confidence 46667888889887789999999887654443321 1344566666677777788889998 999
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--cCCeEEE--ecCcccccccccc
Q psy1785 341 LIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE--YDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 341 ~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~--~~~~lhV--A~gg~~l~~~~~~ 416 (629)
.|+.++++.+|+++|++.+.. .+.+|+.+...+.+|.+-|.+++.++++. .+.++++ +|..... ..+.
T Consensus 138 ~v~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~-~~~~- 209 (371)
T PRK05166 138 RVTVTPDLGFDLDALCAAVAR------APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA-GDDY- 209 (371)
T ss_pred EeecCCCCCCCHHHHHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC-CcCc-
Confidence 999988889999999888754 23456678889999999998888887765 3677777 6654331 1100
Q ss_pred cccccc-ccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 417 CSVFLT-RRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 417 ~~~~l~-~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
.+. +. ... ... --.+..++-|.++.| +-.|.+++.++........... +. +
T Consensus 210 ~~~-~~~~~~--~~~-~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~-~~-------------------~--- 262 (371)
T PRK05166 210 PSA-LTLLKA--RGL-PWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRT-PF-------------------N--- 262 (371)
T ss_pred ccH-HHHHhh--cCC-CEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhcc-CC-------------------C---
Confidence 000 00 000 000 125678899999844 4578777766544433211110 00 0
Q ss_pred cchHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhH
Q psy1785 495 PDVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKV 573 (629)
Q Consensus 495 ~~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~ 573 (629)
...+...+++..+ ..+-+++..+...+..+++.+.|++. |+++ . ++..+ + +|+..+. +
T Consensus 263 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~-~-p~~g~-f-l~~~~~~-----~----------- 321 (371)
T PRK05166 263 VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRI-A-PSRAN-F-LFFDARR-----P----------- 321 (371)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCee-C-CCcCC-E-EEEeCCC-----C-----------
Confidence 0112211222222 23346666677777788899999987 7764 3 34433 2 2432110 0
Q ss_pred HHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 574 APKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 574 ~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..++.+.|.++|..+.. ....+..+++|++++ +.++.++++++|+++.
T Consensus 322 ~~~l~~~l~~~gi~v~p-~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 322 ASAVAEALLRQGVIVKP-WKQPGFETFIRVSIG----SPEENDHFVAALDKVL 369 (371)
T ss_pred HHHHHHHHHHCCeEEec-CCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 12567788888865433 222233579999997 5778999999998764
No 224
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.17 E-value=2.9e-08 Score=107.86 Aligned_cols=287 Identities=10% Similarity=0.081 Sum_probs=163.3
Q ss_pred CCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCC-CC-
Q psy1785 271 GFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDA-RG- 348 (629)
Q Consensus 271 G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~-~g- 348 (629)
+++..+.++|+|+++++..++.... .|...|++..-.+......++..|+ +++.|+.+. +|
T Consensus 85 ~~~~~~i~~t~G~~~al~~~~~~l~--------------~~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~ 147 (397)
T PRK07568 85 DVEPDEILITNGGSEAILFAMMAIC--------------DPGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGF 147 (397)
T ss_pred CCCcceEEEcCChHHHHHHHHHHhc--------------CCCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCC
Confidence 3455678999999998766554321 1333445554444455566778888 999999863 44
Q ss_pred C-CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCcccccccccccccccc
Q psy1785 349 R-MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 349 ~-~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~ 422 (629)
. .|++.|++++.. .+.+|+.+..++.+|.+-+ +++|.++|+++++++++ +|....+-..+ ...++.
T Consensus 148 ~~~~~~~l~~~~~~------~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~--~~s~~~ 219 (397)
T PRK07568 148 HLPSKEEIEKLITP------KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLK--YTSALS 219 (397)
T ss_pred CCCCHHHHHHhcCc------cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCC--ccChhh
Confidence 2 357888887743 2446677778889998764 78899999999999999 77654321110 000001
Q ss_pred ccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHH
Q psy1785 423 RRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFW 501 (629)
Q Consensus 423 ~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w 501 (629)
.. +... --.++.++.|.++. -.-+|.+++.++............. + +.-......+-
T Consensus 220 ~~--~~~~-~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~----------------~---~~s~~~q~~~~ 277 (397)
T PRK07568 220 LE--GLED-RVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQAR----------------L---SPPTLEQIGAA 277 (397)
T ss_pred cC--CCcC-CEEEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhcc----------------C---CCCcHHHHHHH
Confidence 10 1111 12567789999875 3558888776544443321100000 0 11111111111
Q ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEE-EEeeCCCCCCCCchhhHHHHHhhHHHHHHHH
Q psy1785 502 FMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNIS-FWYIPPSLRGKEDQADFNELLHKVAPKIKER 580 (629)
Q Consensus 502 ~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~-F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~ 580 (629)
.+++ .+.+-+++..+...+..+.+.+.|++++++++. .|.-+.++ +++. .. +. .++.+.
T Consensus 278 ~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~--~p~g~~~~~~~l~-~~-----~~-----------~~~~~~ 337 (397)
T PRK07568 278 ALLD-TPESYFDEVREEYKKRRDILYEELNKIPGVVCE--KPKGAFYIIAKLP-VD-----DA-----------EDFAKW 337 (397)
T ss_pred HHhh-CCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec--CCCcceEEEEecC-CC-----CH-----------HHHHHH
Confidence 1222 134456666667777888899999988787654 35554432 3332 11 01 123344
Q ss_pred HHh------cCcEEEeeeec---CC-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 581 MMK------SGSMMITYQPI---HA-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 581 l~~------~G~~~i~~~~~---~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+ .|..+...... .+ ..++||++++ .++++++..++.|++..+
T Consensus 338 l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~---~~~~~~~~~~~~l~~~l~ 391 (397)
T PRK07568 338 LLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV---LNEEDLKRAMEILKEALE 391 (397)
T ss_pred HHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe---CCHHHHHHHHHHHHHHHH
Confidence 433 46544332222 12 1358999985 347999998888877654
No 225
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.16 E-value=8.9e-09 Score=113.06 Aligned_cols=321 Identities=13% Similarity=0.115 Sum_probs=179.2
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEE
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVY 340 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~ 340 (629)
+..+.+++++|.+ ..+++++||+++..++.+....+.. +.++ .|...|+++..+|.+...+....|. .++
T Consensus 67 ~fe~~lA~~~g~~--~~v~~~sGt~al~~aL~al~~~~~~---~~~~--~pGd~VIv~~~t~~a~~~~v~~~G~---~pv 136 (438)
T PRK15407 67 AFEKKLAEFLGVR--YALLVNSGSSANLLAFSALTSPKLG---DRAL--KPGDEVITVAAGFPTTVNPIIQNGL---VPV 136 (438)
T ss_pred HHHHHHHHHhCCC--eEEEECCHHHHHHHHHHHHhhcccc---ccCC--CCCCEEEECCCCcHHHHHHHHHcCC---EEE
Confidence 3344577778765 5889999999998888765432110 1122 2555688889999999999999998 899
Q ss_pred EEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 341 LIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 341 ~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
.++++ +++.+|++.|+++|.. .+.+|+.+. ..|...|+++|.++|+++|+++++ +++.+.....
T Consensus 137 ~vdvd~~~~~id~~~le~~i~~------~tkaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g---- 203 (438)
T PRK15407 137 FVDVELPTYNIDASLLEAAVSP------KTKAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDG---- 203 (438)
T ss_pred EEecCCCcCCcCHHHHHHHcCc------CCeEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEECccchhhhcCC----
Confidence 99987 4688999999998753 244555553 356677999999999999999999 4433222111
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCcccc-----C-C-----cCCC--c--cc
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQ-----K-D-----KFYD--T--KY 482 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~-----~-~-----~~~~--~--~~ 482 (629)
+..|--..+-.+++.+.|.+..-- .|+++++++.+.+.+.... .+=.. . + .... + .+
T Consensus 204 ------~~~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (438)
T PRK15407 204 ------RMTGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFR-DWGRDCWCAPGCDNTCGKRFGWQLGELPF 275 (438)
T ss_pred ------eeeeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHH-HhCcccccccccccccccccccccccccc
Confidence 111111113345555556665433 4788888765544322111 00000 0 0 0000 0 00
Q ss_pred --CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE-ccCCCce----EEEEEeeCC
Q psy1785 483 --DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV-LDEPECT----NISFWYIPP 555 (629)
Q Consensus 483 --~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~-~~~p~~~----~v~F~~~p~ 555 (629)
+........|-.++.-.+.+++-....+.+.+++++-.++++++.+.|..+++...+ ..++... .+.+++.+.
T Consensus 276 ~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 355 (438)
T PRK15407 276 GYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKED 355 (438)
T ss_pred cccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCc
Confidence 000000012222222222233333334567788888999999999999988753222 1112221 222222211
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEE-Eeee-ecC--------------Cc-------cceEEEeecCCCCCH
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKERMMKSGSMM-ITYQ-PIH--------------AL-------PNFFRLVLQNSALDH 612 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~-i~~~-~~~--------------~~-------~~~lR~~~~n~~~t~ 612 (629)
. +. + -.++.+.|.++|.-. +.|. ++. .. ...|-+-+ ++..|+
T Consensus 356 ~--~~----------~--Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~-~~~l~~ 420 (438)
T PRK15407 356 A--GF----------T--RVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGV-YPGLTE 420 (438)
T ss_pred C--CC----------C--HHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecC-CCCCCH
Confidence 0 00 0 035677777777521 1111 110 00 01233333 578899
Q ss_pred HHHHHHHHHHHHHhh
Q psy1785 613 SDMDYFIDEIERLGH 627 (629)
Q Consensus 613 edid~l~~~i~~l~~ 627 (629)
+|+++++++|+++.+
T Consensus 421 ~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 421 EMLDYVIEKIEEFFG 435 (438)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999998653
No 226
>PRK06460 hypothetical protein; Provisional
Probab=99.16 E-value=1.2e-08 Score=109.99 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=136.3
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCC----cchHH
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSED----AHYSI 325 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~----~H~Si 325 (629)
...|....+| +.++++.|.+. .+++++|++++..++.+... |...|+++.. +...+
T Consensus 42 ~~~p~~~~L~----~~lA~l~g~~~--~v~~~sG~~ai~~~l~al~~--------------~Gd~Vl~~~~~~~~ty~~~ 101 (376)
T PRK06460 42 EANPTVLELT----KKIVELENAEM--GVAFSSGMGAISTTALALLK--------------PGNSVLVHRDMFGRSYRFF 101 (376)
T ss_pred CCCccHHHHH----HHHHHHhCCCc--EEEeCCHHHHHHHHHHHHhC--------------CCCEEEEecCCcCcHHHHH
Confidence 3456554444 45888888753 45566677766555443211 3333444432 22234
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-- 403 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-- 403 (629)
.+.++..|+ +++.++.++ .+.+++.+ + ..+.+|.....++.+|.+-|+++|.++|+++|++++|
T Consensus 102 ~~~~~~~G~---~v~~~~~~~-----~~~l~~~~----~--~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDe 167 (376)
T PRK06460 102 TDYLKNWGV---NVDASNPGS-----DNIIEKAK----S--KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDA 167 (376)
T ss_pred HHHHHhhCc---EEEEECCCC-----HHHHHHhc----C--CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence 467778888 788887543 22232222 1 2356788888999999999999999999999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcc
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTK 481 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 481 (629)
+|+.... .. . ++.++|.++.++||+++++.+ .|++ +.++++.+........
T Consensus 168 a~~~~~~-~~-----------~--l~~~~divv~S~sK~l~G~~~~~~G~~-~~~~~l~~~l~~~~~~------------ 220 (376)
T PRK06460 168 TFSTPIN-QK-----------P--LELGADIVVHSASKFLAGHNDVIAGLA-AGYGKLLNVIDQMRRT------------ 220 (376)
T ss_pred CcCcccc-CC-----------h--hhcCCCEEEeecceeccCCCCceEEEE-ecCHHHHHHHHHHHHh------------
Confidence 6654211 11 1 223589999999999975532 5554 4454444332111100
Q ss_pred cCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 482 YDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 482 ~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
.+-...+...|.+++ |.+-++.++++..++++++.+.|++.|.++-+
T Consensus 221 ---------~g~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v 267 (376)
T PRK06460 221 ---------LGTSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKV 267 (376)
T ss_pred ---------cCCCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 011123345666655 56778899999999999999999999887544
No 227
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.16 E-value=2.9e-09 Score=115.85 Aligned_cols=218 Identities=18% Similarity=0.212 Sum_probs=145.8
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IKK 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~k 327 (629)
.|....+| +.++++.|.+. .+++++|+.++..++.... .|...|+++...|.. ...
T Consensus 64 ~p~~~~le----~~lA~l~g~~~--~i~~~sG~~Al~~~l~~ll--------------~~Gd~Viv~~~~y~~t~~~~~~ 123 (403)
T PRK07503 64 NPTLALLE----QRMASLEGGEA--AVALASGMGAITATLWTLL--------------RPGDEVIVDQTLYGCTFAFLHH 123 (403)
T ss_pred CchHHHHH----HHHHHHhCCCc--EEEEcCHHHHHHHHHHHHc--------------CCCCEEEEccCccchHHHHHHH
Confidence 45555554 45888888753 6788888887665554321 133456666665543 234
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.+...|+ +++.++.+ |+++|+++|.+ .+.+|.....++.+|.+-|+++|.++|+++|+++++ +|
T Consensus 124 ~~~~~G~---~v~~vd~~-----d~~~l~~~i~~------~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~ 189 (403)
T PRK07503 124 GLGEFGV---TVRHVDLT-----DPAALKAAISD------KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTY 189 (403)
T ss_pred HHhhCCE---EEEEeCCC-----CHHHHHHhcCc------cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCC
Confidence 4556777 77777753 78888888754 244677777889999999999999999999999999 77
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
..... ..| +..|+|.++.+++|+++.+.+ .|+++ .++++..+..... . . .
T Consensus 190 a~~~~-~~~-------------l~~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~---~-~-~-------- 241 (403)
T PRK07503 190 CTPYL-QRP-------------LELGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEG---L-K-D-------- 241 (403)
T ss_pred ccccc-CCc-------------hhhCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhh---H-H-h--------
Confidence 54322 121 223699999999999997754 56655 5544444321100 0 0 0
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
..+-+...+..|+.++ |.+-+..++++..+++..+.+.|+++|.++.+
T Consensus 242 ------~~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 242 ------MTGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred ------CcCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0122335566677665 45677788888899999999999999887655
No 228
>PRK09265 aminotransferase AlaT; Validated
Probab=99.16 E-value=2.7e-08 Score=108.47 Aligned_cols=294 Identities=13% Similarity=0.077 Sum_probs=168.7
Q ss_pred CCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCC--CC
Q psy1785 271 GFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDA--RG 348 (629)
Q Consensus 271 G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~--~g 348 (629)
+++..+.++++|++++...++.+.. .|...|+++.-+|..+..++...|. +++.++++. ++
T Consensus 92 ~~~~~~i~~t~G~~~~l~~~~~~~~--------------~~gd~Vlv~~p~y~~~~~~~~~~g~---~~v~~~~~~~~~~ 154 (404)
T PRK09265 92 DVDVDDIYIGNGVSELIVMAMQALL--------------NNGDEVLVPAPDYPLWTAAVSLSGG---KPVHYLCDEEAGW 154 (404)
T ss_pred CCCcccEEEeCChHHHHHHHHHHhC--------------CCCCEEEEeCCCCcChHHHHHHcCC---EEEEEecccccCC
Confidence 5666788899999988766554321 1344567778888888888888887 888888764 35
Q ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCccccccccccccccccc
Q psy1785 349 RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 349 ~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~ 423 (629)
.+|+++|++.+.. .+.+|+.+..++.+|.+-| +.+|.++|+++++++++ +|.....-..+. . ..
T Consensus 155 ~~d~~~l~~~~~~------~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~-~----~~ 223 (404)
T PRK09265 155 FPDLDDIRSKITP------RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVH-I----SI 223 (404)
T ss_pred CCCHHHHHHhccc------cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCc-C----CH
Confidence 7999999887753 2446777788999999888 88899999999999999 665432111100 0 00
Q ss_pred cccccCCcceEEE-eCCCCCCCCC-CccEEEEEe-ccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHH
Q psy1785 424 RNYVIEVVADSVT-WNPHKLLTAP-QQCSVFLTR-HQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKF 500 (629)
Q Consensus 424 ~~~~i~~gaDsv~-~~~HK~l~~P-~~~g~ll~r-~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~ 500 (629)
..+ ... ...++ .++-|.++.| .-+|.++.. +.......... ...+... . .+. ..+..
T Consensus 224 ~~~-~~~-~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~-~~~~~~~-------------~-~~~---~~~~q 283 (404)
T PRK09265 224 ASL-APD-LLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEG-LDMLASM-------------R-LCA---NVPAQ 283 (404)
T ss_pred HHc-CCC-ceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHH-HHHHhcc-------------c-cCC---CcHHH
Confidence 000 011 23444 5568998665 336777753 33211111000 0000000 0 011 11222
Q ss_pred HHHHHhcCh-hhHHHHH---HHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHH
Q psy1785 501 WFMWKAKGT-DGLEAHI---DKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPK 576 (629)
Q Consensus 501 w~~l~~~G~-~G~~~~~---~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~ 576 (629)
.++..+++. +.+.+++ ++..+..+.+.+.|++.+++++. .|.-+.++|--.|....+..++ ...
T Consensus 284 ~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~--~p~~g~~l~~~~~~~~~~~~~~----------~~~ 351 (404)
T PRK09265 284 HAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCV--KPKGALYAFPKLDPKVYPIHDD----------EQF 351 (404)
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc--CCCcceEEEEEecccccCCCCH----------HHH
Confidence 222233321 2222222 34556677888888887787754 4655555442222211000000 123
Q ss_pred HHHHHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 577 IKERMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 577 i~~~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+.+.+.|..+..+.... ...+++|+++. .++++++..++.|+++.+
T Consensus 352 ~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 352 VLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred HHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHH
Confidence 5567778887554433322 22468999994 578899988888877543
No 229
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.15 E-value=7.7e-08 Score=104.03 Aligned_cols=300 Identities=9% Similarity=0.054 Sum_probs=170.6
Q ss_pred hHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH
Q psy1785 254 VFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA 330 (629)
Q Consensus 254 ~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~ 330 (629)
....+-+.+.+++.+..|.+ .. ..++|+|++++...++.... .|...|++..-++.....++.
T Consensus 68 G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~--------------~~gd~vlv~~P~y~~~~~~~~ 133 (383)
T TIGR03540 68 GMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFV--------------NPGDIVLVPDPGYPVYRIGTL 133 (383)
T ss_pred CCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhC--------------CCCCEEEEeCCCCcchHHHHH
Confidence 34455566677777766764 23 46678888887665544321 134456666667777777888
Q ss_pred HcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--
Q psy1785 331 FEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV-- 403 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV-- 403 (629)
.+|. +++.||.+++ ..+|+++|++++.+ .+.+|..+...+.+|.+-+ +.+|.++|++|++++.+
T Consensus 134 ~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De 204 (383)
T TIGR03540 134 FAGG---EPYEMPLKEENGFLPDFDAIPEDIAK------KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDN 204 (383)
T ss_pred hcCC---EEEEEecCcccCCccCHHHHHhhccc------cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEec
Confidence 9998 9999999743 45799999888753 2445666667899999877 68888899999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
+|....+-.. ....+.... +... -.....++-|.++.| .-+|.++. ++++......... +..
T Consensus 205 ~y~~l~~~~~--~~~~~~~~~--~~~~-~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~~~~~~~~-~~~---------- 267 (383)
T TIGR03540 205 AYSEITFDGY--KAPSFLEVD--GAKD-VGIEFHSLSKTYNMTGWRIGMAVG-NADLIAGLGKVKT-NVD---------- 267 (383)
T ss_pred chhhhccCCC--CCcCcccCC--Cccc-CEEEEEecccccCCccceeeEEeC-CHHHHHHHHHHHH-hcc----------
Confidence 6654322110 000000100 1111 235567777999754 22677654 4444443211100 000
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEE-EEEeeCCCCCCCC
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNI-SFWYIPPSLRGKE 561 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v-~F~~~p~~~~~~~ 561 (629)
.+........+..++.. +.+-+++..+...+..+.+.+.|++. |+++.. |..+.+ .+++ |+...
T Consensus 268 -------~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~--~~~~~~~~~~l-~~~~~--- 332 (383)
T TIGR03540 268 -------SGVFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEK--PKATFYVWVPV-PEGYT--- 332 (383)
T ss_pred -------cCCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecC--CCcceEEEEEC-CCCCC---
Confidence 00001111222222221 33445566666777888999999987 887653 444432 2332 32211
Q ss_pred chhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 562 DQADFNELLHKVAPKIKERMM-KSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 562 ~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..++.+.|. +.|..+..+..... ..+++|++++ .++++++..++.|.
T Consensus 333 ------------~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~ 381 (383)
T TIGR03540 333 ------------SAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT---VPDERLEEAVARIK 381 (383)
T ss_pred ------------HHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec---CCHHHHHHHHHHHh
Confidence 124566664 56764433222221 1358999995 24666666665554
No 230
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.15 E-value=5e-08 Score=107.16 Aligned_cols=315 Identities=11% Similarity=0.058 Sum_probs=178.8
Q ss_pred hhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA 330 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~ 330 (629)
.....+.+.+.+++.+-.|. +..+.++|+|+++++..++.... .|...|++..-++......+.
T Consensus 94 ~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~--------------~~Gd~Vlv~~P~y~~y~~~~~ 159 (430)
T PLN00145 94 VGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLA--------------QPGANILLPRPGYPLYEARAV 159 (430)
T ss_pred ccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhc--------------CCCCEEEEcCCCCccHHHHHH
Confidence 34444445555555443343 34689999999999776655432 133346666666666777888
Q ss_pred HcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--
Q psy1785 331 FEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV-- 403 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV-- 403 (629)
..|+ +++.++.. +++.+|+++|++.+.+ .+..++.+..++.+|.+-| +.+|.++|+++++++++
T Consensus 160 ~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De 230 (430)
T PLN00145 160 FSGL---EVRHFDLLPERGWEVDLEGVEALADE------NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADE 230 (430)
T ss_pred HcCC---EEEEeeCCcccCCcCCHHHHHHHhCc------CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 8898 88888864 3568999999887754 3456778888999999988 77888889999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEecc-chhhhh--hcCCCCccccCCcCCC
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQ-SVLTEC--HSASASYLFQKDKFYD 479 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~-~~l~~~--~~~~~~yl~~~~~~~~ 479 (629)
+|....+-..+ +. ....++-.. -=.+..+.-|.++.| .-+|.+...++ ..+... ...-..+..
T Consensus 231 ~Y~~~~~~~~~--~~---~~~~~~~~~-~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~------- 297 (430)
T PLN00145 231 VYDHLTFGSKP--FV---PMGVFGEVA-PVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLN------- 297 (430)
T ss_pred cchhhccCCCC--cc---chhhhcccC-cEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhc-------
Confidence 66543321110 00 000000000 125667788986655 44888876432 222110 000000000
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCC-CC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPS-LR 558 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~-~~ 558 (629)
.. .+...+....+-.+++.-..+-+++..+...+..+.+.+.|+++++++... .|.-....+--.|.. +.
T Consensus 298 -------~~-~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~-~P~ga~y~~v~l~~~~~~ 368 (430)
T PLN00145 298 -------IS-TDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCPH-KPEGSMFVMVKLDLSCLS 368 (430)
T ss_pred -------cc-CCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCc-CCCeeeEEEeccChhhcC
Confidence 00 011111111111222211134467777788888899999999988887544 465555433212211 11
Q ss_pred CCCchhhHHHHHhhHHHHHHHHH-HhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 559 GKEDQADFNELLHKVAPKIKERM-MKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l-~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+..+. .++..++ .+.|.+++..... +..+++|++++ . +.++++..++.|.++..
T Consensus 369 ~~~~~-----------~~~~~~ll~~~gV~v~pG~~f-g~~~~lRis~~-~--~~~~l~~al~rl~~~~~ 423 (430)
T PLN00145 369 GIKDD-----------MDFCCKLAKEESVVVLPGSAL-GMKNWLRITFA-I--DPPSLEDGLERLKSFCL 423 (430)
T ss_pred CCCCH-----------HHHHHHHHHhCCEEEeCcccc-CCCCeEEEEeC-C--CHHHHHHHHHHHHHHHH
Confidence 11000 1334444 4556655443333 34579999996 3 57778777777776543
No 231
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.15 E-value=5.1e-08 Score=108.80 Aligned_cols=316 Identities=11% Similarity=0.134 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHhC----CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH-
Q psy1785 256 SLMEEHVLAQMRTIVG----FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA- 330 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G----~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~- 330 (629)
..+-+.+.+++.+..| ++..+.++|+|+++++..++.+.. .|...|++..-++..+...++
T Consensus 97 ~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~--------------~pGD~Vlv~~P~Y~~~~~~~~~ 162 (496)
T PLN02376 97 KKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA--------------DPGDVFLIPSPYYAAFDRDLRW 162 (496)
T ss_pred HHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC--------------CCCCEEEECCCCccchHHHHHh
Confidence 3444555666766666 556788999999998766555332 244456667666666777666
Q ss_pred HcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--
Q psy1785 331 FEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV-- 403 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV-- 403 (629)
..|+ +++.||++ +++.+|+++|++++....+.+..+..|+.+...+.+|.+-+ +.+|.++|+++++++.+
T Consensus 163 ~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DE 239 (496)
T PLN02376 163 RTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDE 239 (496)
T ss_pred hCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 4788 99999996 35689999999888665544545666777889999999977 45567788999999999
Q ss_pred ecCccccccccccccccccc-cccccCC-cce--EEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 404 TWNPHKLLTAPQQCSVFLTR-RNYVIEV-VAD--SVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~-~~~~i~~-gaD--sv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
+|....+-..++ .+ ++.. ....... ..+ .++.++.|.++.| +-+|.++..++.+.... .....+.
T Consensus 240 iY~~~~f~~~~~-~s-i~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~-~~~~~~~------- 309 (496)
T PLN02376 240 IYAATVFAGGDF-VS-VAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCA-RKMSSFG------- 309 (496)
T ss_pred CccccccCCCCc-cc-HHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHH-HHHhhcC-------
Confidence 777654322111 01 0010 0000000 012 3468999999766 66898887654433221 1000000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhH-HHH----HHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGL-EAH----IDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~-~~~----~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~ 553 (629)
....+..+++...+....+ ++. .++..+..+.+.+.|++. |++.+ +|.-+.+++--.
T Consensus 310 ---------------~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~--~~~aG~flwi~l 371 (496)
T PLN02376 310 ---------------LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACL--TSNAGLFAWMDL 371 (496)
T ss_pred ---------------CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc--CCCceEEEEEEc
Confidence 0112222333333333333 333 344455566677788775 77754 355555544222
Q ss_pred CCCCCCCCchhhHHHHHhhHHHHHHHHHHhc-CcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 554 PPSLRGKEDQADFNELLHKVAPKIKERMMKS-GSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 554 p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
+..+... ..+.. ..++.+.+.++ |..+..+.... ..+++||+++++ .+++.++..++.|+++.
T Consensus 372 ~~~~~~~---~~~~~-----e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl~~~l 436 (496)
T PLN02376 372 RHLLRDR---NSFES-----EIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRIQDFV 436 (496)
T ss_pred hhhhccC---CchhH-----HHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHHHH
Confidence 2211100 00000 12456666654 75443333332 234699999973 45678887777776654
No 232
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.15 E-value=5.2e-08 Score=105.98 Aligned_cols=301 Identities=12% Similarity=0.091 Sum_probs=170.3
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCC--
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGS-- 336 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~-- 336 (629)
..++.+.+++++|.+ ...|+++||++|..|+..++.... .+.|....+..++...+..|-+...+....+-..
T Consensus 75 ~~~~~~~l~~~~~~~--~~~~~~SGs~A~e~al~~~~~~~~---~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~ 149 (400)
T PTZ00125 75 LGLAEKYITDLFGYD--KVLPMNSGAEAGETALKFARKWGY---EVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCY 149 (400)
T ss_pred HHHHHHHHHhCCCCC--EEEEeCCcHHHHHHHHHHHHHHHH---hccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchh
Confidence 345555567777653 678999999999999999985421 2223211234567777778887766655443200
Q ss_pred -------CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--
Q psy1785 337 -------DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV-- 403 (629)
Q Consensus 337 -------~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV-- 403 (629)
..+..++ ..|+++|++.++. . .+.+|+.....+.+|.+-| +++|+++|++||+++++
T Consensus 150 ~~~~~~~~~~~~~~-----~~d~~~le~~l~~----~-~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~De 219 (400)
T PTZ00125 150 NNFGPFVPGFELVD-----YNDVEALEKLLQD----P-NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDE 219 (400)
T ss_pred ccCCCCCCCceEeC-----CCCHHHHHHHhCC----C-CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0122222 2488999888851 1 3445555555677888877 99999999999999999
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
++.+...-...+ . .... ++ . .|.++++ |+++.++ ..|+++++++ ....... .. ..
T Consensus 220 v~~g~g~~G~~~--~--~~~~--~~-~-pd~~~~s--K~l~~g~~~ig~v~~~~~-~~~~~~~----~~-~~-------- 275 (400)
T PTZ00125 220 IQTGLGRTGKLL--A--HDHE--GV-K-PDIVLLG--KALSGGLYPISAVLANDD-VMLVIKP----GE-HG-------- 275 (400)
T ss_pred cccCCCccchhh--H--HHhc--CC-C-CCEEEEc--ccccCCCcCcEEEEEcHH-HHhhccC----CC-CC--------
Confidence 554321111000 0 0111 22 2 5888875 9998765 7888888663 3332111 00 00
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCCceEEEEEeeCCCCC
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPECTNISFWYIPPSLR 558 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~~~~v~F~~~p~~~~ 558 (629)
. + .++.+........+++.+..+++.+ +..++.+++++.|++. +.+..+ .+.-..+.+.+.++.
T Consensus 276 --~--t-~~~~~~~~~aa~~~l~~i~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~~~--~~~g~~~~v~~~~~~-- 343 (400)
T PTZ00125 276 --S--T-YGGNPLACAVAVEALEVLKEEKLAE---NAQRLGEVFRDGLKELLKKSPWVKEI--RGKGLLNAIVFDHSD-- 343 (400)
T ss_pred --C--C-CCcCHHHHHHHHHHHHHHHhcCHHH---HHHHHHHHHHHHHHHHHhcCCCeEEE--ecccEEEEEEEccCc--
Confidence 0 0 1122223333334455544445544 3444667777777653 222112 232222333332111
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.. ....+.++|.++|.++ .. . ..++||++++ ...+++||+.+++.|++..++
T Consensus 344 ~~------------~~~~~~~~l~~~Gv~v-~~--~--~~~~lRi~~~-~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 344 GV------------NAWDLCLKLKENGLLA-KP--T--HDNIIRFAPP-LVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred ch------------HHHHHHHHHHHCCeEE-ee--c--CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHH
Confidence 00 1135677888888543 32 1 2358999995 789999999999999886543
No 233
>PRK09105 putative aminotransferase; Provisional
Probab=99.15 E-value=2e-08 Score=108.18 Aligned_cols=281 Identities=14% Similarity=0.094 Sum_probs=178.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++.+|++..+.++|+|++++...++.+... |...|++..-+|......++..|. ++
T Consensus 81 ~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~--------------~gd~Vli~~P~y~~~~~~~~~~g~---~~ 143 (370)
T PRK09105 81 DDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTS--------------PTAGLVTADPTYEAGWRAADAQGA---PV 143 (370)
T ss_pred HHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcC--------------CCCEEEEeCCChHHHHHHHHHcCC---eE
Confidence 4556678888899888899999999987666554321 334566677778888889999999 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--cCCeEEE--ecCccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE--YDMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~--~~~~lhV--A~gg~~l~~~~~ 415 (629)
+.+|.++++.+|++.|++.. . .+.+|+.+...+.+|.+-+.+++.++++. ++.|+.+ +|.... . .+
T Consensus 144 ~~v~~~~~~~~d~~~l~~~~-~------~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~-~-~~- 213 (370)
T PRK09105 144 AKVPLRADGAHDVKAMLAAD-P------NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFS-D-AP- 213 (370)
T ss_pred EEecCCCCCCCCHHHHHhcC-C------CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhc-c-Cc-
Confidence 99999888899999887652 1 23456677889999999999999988764 3788888 764321 1 10
Q ss_pred cccccccccccccCCcceEEE-eCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVT-WNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~-~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
+. .... +.+-+.++ .++.|.++.| .-+|.++.. +..+...... .. .
T Consensus 214 --s~-~~~~----~~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i~~l~~~------~~----------------~-- 261 (370)
T PRK09105 214 --SV-VDLV----AQRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLLAKLARF------GH----------------N-- 261 (370)
T ss_pred --ch-HHHH----hhCCCEEEEecccHhhcCCccceeeeecC-HHHHHHHHhc------CC----------------C--
Confidence 00 0110 11145555 5777888744 337777754 3444432110 00 0
Q ss_pred CcchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 494 KPDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 494 ~~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
.......+.+...+.. +-+++..++..+..+++.+.|++. |+++. +|..+.+.+.+ + ..
T Consensus 262 ~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~~f~~~~~-~--~~-------------- 321 (370)
T PRK09105 262 PLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT--PSQANCFMVDV-K--RP-------------- 321 (370)
T ss_pred CcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC--CCCCcEEEEeC-C--CC--------------
Confidence 0122233333333332 334555667777888899999886 78754 45555443332 1 00
Q ss_pred HHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..++.+.|.++|.. ++. ...+..+++|+++. +++++++++++|+++.
T Consensus 322 -~~~l~~~L~~~gI~-v~~-~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 322 -AKAVADAMAKQGVF-IGR-SWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred -HHHHHHHHHHCCcE-Eec-CCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 02567788888864 432 22333469999986 5789999999998875
No 234
>KOG1357|consensus
Probab=99.14 E-value=3.6e-09 Score=110.63 Aligned_cols=343 Identities=12% Similarity=0.144 Sum_probs=206.9
Q ss_pred CCCCccccccCCCCChHHHHHHHHHHh-cCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHH
Q psy1785 215 TGHPYFVNQLFSSVDPYGLVGQWLADA-LNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISC 293 (629)
Q Consensus 215 ~~~p~~~g~~~s~~~~~~~~~~~lt~~-~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ 293 (629)
.++-+|.|+-.+...-+.-..+.+-.+ ++......+. ......+++.+.+++++|.+++ .+|..| -..|-+.+.
T Consensus 141 lgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~--G~~~~hkelE~l~A~f~g~e~a-~vF~mG-f~TNs~~~p- 215 (519)
T KOG1357|consen 141 LGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEA--GTTEEHKELEELVARFLGVEDA-IVFSMG-FATNSMNIP- 215 (519)
T ss_pred ecccccccccccCCcCChHHHHHHHHhcccccccchhc--ccHHHHHHHHHHHHHhcCCcce-EEEecc-ccccccCcc-
Confidence 345567776655433332233333322 2222222222 3445667777889999998863 344443 111211111
Q ss_pred HHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCC-----C
Q psy1785 294 ARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGA-----V 368 (629)
Q Consensus 294 ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~-----~ 368 (629)
.+. -|...|+..+..|-|+...|++.|. .+++.+.| |.++||+.|.+...+|. .
T Consensus 216 -------~l~------~~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-----dm~~LEr~Lrd~I~~gqP~Thrp 274 (519)
T KOG1357|consen 216 -------SLL------GKGSLIISDELNHASLITGARLSGA---TTRVFRHN-----DMQGLERLLRDAIVYGQPKTHRP 274 (519)
T ss_pred -------eee------cCCcceeeccccchheeccccccCc---eEEEEecC-----CHHHHHHHHHHHHhcCCCCcCCc
Confidence 111 2455688889999999999999998 88888854 68899999998877663 2
Q ss_pred c--EEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCC
Q psy1785 369 P--FMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLT 444 (629)
Q Consensus 369 ~--~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~ 444 (629)
| +.|++-.-.+.-|.+++++++..++|+|...+++ |+..+++-.--..|-.+... +-+. +|.+-...-|.++
T Consensus 275 ~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~---d~~d-vDImMGtftKSfg 350 (519)
T KOG1357|consen 275 WKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGV---DPED-VDIMMGTFTKSFG 350 (519)
T ss_pred chheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCC---Cchh-heeecceehhhcc
Confidence 3 3444444556889999999999999999999999 77666542211222211111 2244 9999999999998
Q ss_pred CCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHh-c---ChhhHHHHHHHHH
Q psy1785 445 APQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKA-K---GTDGLEAHIDKSF 520 (629)
Q Consensus 445 ~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~-~---G~~G~~~~~~~~~ 520 (629)
+ +|..+..++.+.+.. .....+.. +.-..+-+. +-....+++. . |.++.++.+++..
T Consensus 351 a---~GGyiagsk~lid~l-rt~s~~~~--------------yat~~sppv-aqq~~ssl~~i~G~dgt~~g~~k~~~l~ 411 (519)
T KOG1357|consen 351 A---AGGYIAGSKELIDYL-RTPSPSAL--------------YATSLSPPV-AQQILTSVKHIMGEDGTNRGRQKIERLA 411 (519)
T ss_pred c---ccceecCcHHHHhhh-ccCCCcee--------------ecccCChHH-HHHHHHHHHhhcCCCcccHHHHHHHHHH
Confidence 6 566666555444321 11111100 000112121 2222223333 2 5667888999999
Q ss_pred HHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEE--ee--eecCC
Q psy1785 521 DNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMI--TY--QPIHA 596 (629)
Q Consensus 521 ~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i--~~--~~~~~ 596 (629)
++++|++..+++. ||.+.+ ..+.+++-.-+.++.. ...+-++|.+++...+ ++ +++-.
T Consensus 412 ~ns~yfr~~l~~~-gfivyG-~~dSpVvplll~~~~k----------------~~~f~r~~l~~nigvVvvgfPatpl~e 473 (519)
T KOG1357|consen 412 ENSRYFRWELQKM-GFIVYG-NNDSPVVPLLLYGPAK----------------IVAFSREMLERNIGVVVVGFPATPLLE 473 (519)
T ss_pred hhhHHHHHhhhcC-cEEEec-CCCCCcceeeecCccc----------------ccHHHHHHHhcCceEEEEeCCCchHHH
Confidence 9999999999987 998887 4444444444433221 1234556666654332 22 12212
Q ss_pred ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 597 LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 597 ~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.-.|+|.+ ...|+|++|++++.+.+.++
T Consensus 474 --~r~R~c~S-a~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 474 --SRARFCLS-ASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred --hHHHhhhc-ccccHHHHHHHHHHHhhhch
Confidence 23699985 99999999999999998874
No 235
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.13 E-value=1.7e-07 Score=102.39 Aligned_cols=328 Identities=13% Similarity=0.103 Sum_probs=186.5
Q ss_pred HHHHHHHHHhcCCC-ccccccChhHHHHHHHHHHHHHHHhC--------CCCCCeEEeCCchhhHHHHHHHHHHhhchhH
Q psy1785 232 GLVGQWLADALNPS-VYTYEVSPVFSLMEEHVLAQMRTIVG--------FQGGDGIFCPGGSMANGYAISCARHHAFPQI 302 (629)
Q Consensus 232 ~~~~~~lt~~~n~~-~~~~~~~p~~~~~E~~~~~~l~~l~G--------~~~~~g~~~~GgT~an~~al~~ar~~~~~~~ 302 (629)
..+.+.+...++.. ...|....+...+-+.+.+++.+-++ ++..+.++|+|+++++..++.+...
T Consensus 53 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~------ 126 (412)
T PTZ00433 53 AIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD------ 126 (412)
T ss_pred HHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC------
Confidence 33444455444432 22343233344555555555554332 4457899999999987766654321
Q ss_pred HhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCc
Q psy1785 303 KTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTV 380 (629)
Q Consensus 303 ~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~ 380 (629)
|...|++..-++..+...++..|+ +++.+|.++ ++.+|+++|++.+.. .+.+|+.+...+.
T Consensus 127 --------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~i~~~~p~NP 189 (412)
T PTZ00433 127 --------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDD------RTKALIMTNPSNP 189 (412)
T ss_pred --------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhcc------CceEEEEeCCCCC
Confidence 334566777778888889999998 999999864 468999999887754 2445667777888
Q ss_pred ccccc---CHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEE
Q psy1785 381 LGAFD---PIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLT 454 (629)
Q Consensus 381 ~G~id---pl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~ 454 (629)
+|.+- .+.+|.++|+++++++++ +|.....-..+ .. ....+.-+. --.++.++-|.++.| +-+|.+++
T Consensus 190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~---~~~~~~~~~-~~i~~~SfSK~~~~pGlRlG~~i~ 263 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGAT--FT---SVADFDTTV-PRVILGGTAKNLVVPGWRLGWLLL 263 (412)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCC--cc---chhhccCCC-ceEEEccchhhcCCCCeeEEEEEE
Confidence 99754 577888899999999999 77643321110 00 000110011 125677899998655 55888886
Q ss_pred ecc-----chhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhc--C-hhhHHHHHHHHHHHHHHH
Q psy1785 455 RHQ-----SVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAK--G-TDGLEAHIDKSFDNAKYF 526 (629)
Q Consensus 455 r~~-----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~--G-~~G~~~~~~~~~~la~~l 526 (629)
.++ .++....... +. . .+. ..+...+....+ + ..-+++..++..+..+.+
T Consensus 264 ~~p~~~~~~~~~~~~~~~--~~----------------~-~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l 321 (412)
T PTZ00433 264 VDPHGNGGDFLDGMKRLG--ML----------------V-CGP---CSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVL 321 (412)
T ss_pred eCCcccHHHHHHHHHHHh--hc----------------c-CCC---ChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 322 2222111100 00 0 001 111111111122 2 233555566667778888
Q ss_pred HHHHhcCCCcEEEccCCCceEEEE-EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecCCccceEEEe
Q psy1785 527 TDKIRHRPGFKLVLDEPECTNISF-WYIPPSLRGKEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIHALPNFFRLV 604 (629)
Q Consensus 527 ~~~L~~~~g~~l~~~~p~~~~v~F-~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~~~~~~lR~~ 604 (629)
.+.|++..++++. .|.-+.+.+ ++....+.+..+ ..++.++|.+ .|..+...... +..+++|++
T Consensus 322 ~~~L~~~~~~~~~--~p~gg~f~~~~l~~~~~~~~~~-----------~~~~~~~ll~~~gV~v~pg~~f-~~~~~iRis 387 (412)
T PTZ00433 322 YNHIGECIGLSPT--MPRGSMFLMSRLDLEKFRDIKS-----------DVEFYEKLLEEENVQVLPGEIF-HMPGFTRLT 387 (412)
T ss_pred HHHHhcCCCCccc--CCCeeEEEEEEechhhcCCCCC-----------HHHHHHHHHHhcCEEEeCcccc-CCCCeEEEE
Confidence 8999887677644 355554433 332111100000 1256677764 67654433322 224699999
Q ss_pred ecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 605 LQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 605 ~~n~~~t~edid~l~~~i~~l~~ 627 (629)
++ . .+++++..++.|.++.+
T Consensus 388 ~~-~--~~e~l~~al~~l~~~~~ 407 (412)
T PTZ00433 388 IS-R--PVEVLREAVERIKAFCE 407 (412)
T ss_pred ec-C--CHHHHHHHHHHHHHHHH
Confidence 96 3 37888888888877654
No 236
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.13 E-value=3e-08 Score=101.87 Aligned_cols=316 Identities=18% Similarity=0.220 Sum_probs=186.7
Q ss_pred cccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcC---Ccch
Q psy1785 247 YTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSE---DAHY 323 (629)
Q Consensus 247 ~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~---~~H~ 323 (629)
|+.-+.|-+..+|+.+ +.|=|- ..+.-+.+|..+..+++..... .| .-+|..+. -++-
T Consensus 56 YsRi~NPT~~vlE~Ri----AaLEGG--~aa~a~aSG~AA~~~ai~~la~--------aG-----D~iVss~~LYGGT~~ 116 (426)
T COG2873 56 YTRIMNPTTDVLEERI----AALEGG--VAALAVASGQAAITYAILNLAG--------AG-----DNIVSSSKLYGGTYN 116 (426)
T ss_pred eeeccCchHHHHHHHH----HHhhcc--hhhhhhccchHHHHHHHHHhcc--------CC-----CeeEeeccccCchHH
Confidence 3334567777777663 333221 1344556666666666654322 12 22333222 2233
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE
Q psy1785 324 SIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 324 Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV 403 (629)
-+..+.+-+|+ +++.|.. .|++.++++|++. +..|-+-.-++..+.+-|+++|+++||++|+.+.|
T Consensus 117 lf~~tl~~~Gi---~v~fvd~-----~d~~~~~~aI~~n------Tkavf~EtigNP~~~v~Die~ia~iAh~~gvpliV 182 (426)
T COG2873 117 LFSHTLKRLGI---EVRFVDP-----DDPENFEAAIDEN------TKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIV 182 (426)
T ss_pred HHHHHHHhcCc---EEEEeCC-----CCHHHHHHHhCcc------cceEEEEeccCCCccccCHHHHHHHHHHcCCcEEE
Confidence 45566788999 9999985 3689999999873 55677777788889999999999999999999999
Q ss_pred --ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 404 --TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 404 --A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
.++...++-+ ++.|||+|+=+.-||+++.- ..|.+++-.. .+.-..+.+-+.+...+..|.+
T Consensus 183 DNT~atpyl~rP--------------~~hGADIVvHS~TK~igGhGt~iGG~iVD~G-~FDw~~~~rfP~~~~p~p~YhG 247 (426)
T COG2873 183 DNTFATPYLCRP--------------IEHGADIVVHSATKYIGGHGTAIGGVIVDGG-KFDWTANGRFPEFTTPDPSYHG 247 (426)
T ss_pred ecCCCcceecch--------------hhcCCCEEEEeecccccCCccccceEEEeCC-ccccccCCCCcccCCCCccccc
Confidence 6766644322 45689999999999998753 3566665332 1211102222223333322222
Q ss_pred cc--C-CCCcc------CCC----CCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc-c----C
Q psy1785 481 KY--D-SGDKH------IQC----GRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL-D----E 542 (629)
Q Consensus 481 ~~--~-~~~~~------~~~----sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~-~----~ 542 (629)
.. + ++..- .++ |-....+..|..++ |.|-+.=+++|++++|..+.+.|+++|.+.-++ + .
T Consensus 248 l~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~ 325 (426)
T COG2873 248 LVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASH 325 (426)
T ss_pred eehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCC
Confidence 10 0 11000 011 11123455665544 778888899999999999999999999886653 1 1
Q ss_pred C------------CceEEEEEeeCCCCCCCCchhhHHH-HHhhHHHHHHHHHHhcC---cEEEeee--e---cC------
Q psy1785 543 P------------ECTNISFWYIPPSLRGKEDQADFNE-LLHKVAPKIKERMMKSG---SMMITYQ--P---IH------ 595 (629)
Q Consensus 543 p------------~~~~v~F~~~p~~~~~~~~~~~~~~-~l~~~~~~i~~~l~~~G---~~~i~~~--~---~~------ 595 (629)
| ...+++|.+... .+..+ .++.+ ++...+..-| .+.|.+. . +.
T Consensus 326 ~~h~la~kyl~~g~g~vltF~~kgg--------~ea~~~fi~~l--~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~ 395 (426)
T COG2873 326 PYHALAKKYLPKGAGAVLTFGVKGG--------YEAGKKFIDAL--KLFSHLANIGDARSLVIHPASTTHRQLSEEEQAA 395 (426)
T ss_pred cchhHHHhhccCCCceEEEEEecCh--------HHHHHHHHHHH--HHHHhhccccccceeEecCcccchhcCCHHHHHh
Confidence 1 135677776432 11122 22321 3444444444 3344321 1 11
Q ss_pred -C-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 596 -A-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 596 -~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
| .+..+|+++. -||++.++..|++..+
T Consensus 396 aGv~~~~IRlSVG-----IEd~~DiiaDl~qAl~ 424 (426)
T COG2873 396 AGVTPDLIRLSVG-----IEDIDDIIADLEQALE 424 (426)
T ss_pred cCCCCCcEEEEec-----cCCHHHHHHHHHHHHh
Confidence 1 2468999997 5788888888877544
No 237
>PRK07337 aminotransferase; Validated
Probab=99.13 E-value=7.4e-08 Score=104.38 Aligned_cols=317 Identities=13% Similarity=0.103 Sum_probs=179.8
Q ss_pred HHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeE
Q psy1785 237 WLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLV 314 (629)
Q Consensus 237 ~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~v 314 (629)
.+...+......|...+....+.+.+.+++.+..|+ +..+.++|+|++++...++.+.. .+...
T Consensus 51 ~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--------------~~gd~ 116 (388)
T PRK07337 51 AAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALV--------------ERGDE 116 (388)
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhc--------------CCCCE
Confidence 344333322333443444556667777777766675 44678899999998655544321 13445
Q ss_pred EEEcCCcchHHHHHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHH
Q psy1785 315 LYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPA 389 (629)
Q Consensus 315 v~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~e 389 (629)
|++..-+|......++..|. +++.+|.+. ++.+|+++|++.+.. .+.+|+.+...+.+|.+-+ +.+
T Consensus 117 Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~ 187 (388)
T PRK07337 117 VLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGE------RTRGVLLASPSNPTGTSIAPDELRR 187 (388)
T ss_pred EEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCc------cceEEEEECCCCCCCcCcCHHHHHH
Confidence 77777888888888888887 899999974 358999999887753 2345666778899998765 678
Q ss_pred HHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEE-EeCCCCCCCCCC-ccEEEEEeccchhhhhhc
Q psy1785 390 IADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSV-TWNPHKLLTAPQ-QCSVFLTRHQSVLTECHS 465 (629)
Q Consensus 390 i~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv-~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~ 465 (629)
|.++|+++++++.+ +|.....-..+ ... ...+.+.+ +.+++|.++.|- -+|.++..+ .+......
T Consensus 188 i~~~a~~~~~~ii~De~y~~~~~~~~~---------~~~-~~~~~~vi~~~S~SK~~~~~G~RiG~~~~~~-~l~~~l~~ 256 (388)
T PRK07337 188 IVEAVRARGGFTIVDEIYQGLSYDAAP---------VSA-LSLGDDVITINSFSKYFNMTGWRLGWLVVPE-ALVGTFEK 256 (388)
T ss_pred HHHHHHHCCCEEEEeccccccccCCCC---------cCh-hhccCCEEEEEechhhcCCchhheeeeecCH-HHHHHHHH
Confidence 88889999999999 77653321110 000 11123444 558899997553 378777654 33332211
Q ss_pred CCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcCh---hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC
Q psy1785 466 ASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGT---DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE 542 (629)
Q Consensus 466 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~---~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~ 542 (629)
.. .++. . + ...+..+++..++.. +-+++..++..+..+++.+.|++. ++.+.. .
T Consensus 257 ~~-~~~~----------------~-~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~-~ 313 (388)
T PRK07337 257 LA-QNLF----------------I-C---ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPV-M 313 (388)
T ss_pred HH-HHhc----------------c-C---CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCcccc-C
Confidence 00 0000 0 0 112222223333322 235555556667778888888886 665433 3
Q ss_pred CCceEEEE-EeeCCCCCCCCchhhHHHHHhhHHHHHHHHH-HhcCcEEEeeeecC--CccceEEEeecCCCCCHHHHHHH
Q psy1785 543 PECTNISF-WYIPPSLRGKEDQADFNELLHKVAPKIKERM-MKSGSMMITYQPIH--ALPNFFRLVLQNSALDHSDMDYF 618 (629)
Q Consensus 543 p~~~~v~F-~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l-~~~G~~~i~~~~~~--~~~~~lR~~~~n~~~t~edid~l 618 (629)
|.-+.+.+ ++.+....+..+ ..++.+++ .+.|..+..+.... ...+++|++++ . +++++...
T Consensus 314 p~~g~f~~~~~~~~~~~~~~~-----------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~-~--~~~~l~~~ 379 (388)
T PRK07337 314 PDGAFYVYADCRGVAHPAAGD-----------SAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA-T--SMSRLEEA 379 (388)
T ss_pred CCeeEEEEEecccccCCCCCC-----------HHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec-C--CHHHHHHH
Confidence 55444322 221100000000 02445554 45676543322221 12369999997 3 46677766
Q ss_pred HHHHHH
Q psy1785 619 IDEIER 624 (629)
Q Consensus 619 ~~~i~~ 624 (629)
++.|.+
T Consensus 380 l~rl~~ 385 (388)
T PRK07337 380 VARLGK 385 (388)
T ss_pred HHHHHH
Confidence 666654
No 238
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.13 E-value=7e-08 Score=105.15 Aligned_cols=321 Identities=12% Similarity=0.101 Sum_probs=177.3
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|....+...+.+.+.+++.+.+|.. ..+.++|+|++.+...++.+.. .|...|+++.-+++...
T Consensus 66 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~--------------~~gd~vl~~~p~y~~y~ 131 (402)
T PRK06107 66 YTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATL--------------EAGDEVIIPAPYWVSYP 131 (402)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhc--------------CCCCEEEEecCCCcCHH
Confidence 4333344556667777888888874 3678999999998776654321 13445666665555555
Q ss_pred HHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHc-CCe
Q psy1785 327 KLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEY-DMA 400 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~-~~~ 400 (629)
.+....+. .++.++++. ++.+|+++|++.+.. .+..|+.+..++.+|.+-+ +.+|+++|+++ +++
T Consensus 132 ~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~ 202 (402)
T PRK06107 132 DMVLANDG---TPVIVACPEEQGFKLTPEALEAAITP------RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVL 202 (402)
T ss_pred HHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeE
Confidence 66666665 677788753 357999999887753 2445666778899997754 56777888998 999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+++ +|+...+-..+ ...+..... +... --.+..+++|.++.|- -+|.++.. +.+....... ..+.
T Consensus 203 iI~De~y~~l~~~~~~--~~~~~~~~~-~~~~-~vi~~~S~SK~~~~pGlRiG~~~~~-~~~~~~~~~~-~~~~------ 270 (402)
T PRK06107 203 VLTDDIYDHIRFDDEP--TPHLLAAAP-ELRD-RVLVTNGVSKTYAMTGWRIGYAAGP-ADLIAAINKL-QSQS------ 270 (402)
T ss_pred EEEehhccccccCCCC--CCCHHHhCc-CccC-CEEEEeccchhhcCcccceeeeecC-HHHHHHHHHH-HHhc------
Confidence 999 77643221110 000001000 0111 2345677799997553 36776654 3444322110 0000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAK--GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPP 555 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~ 555 (629)
+.....+..+++.+++ +..-+++..+...+..+.+.+.|++++|+++. .|+.+.+ +|..-+
T Consensus 271 --------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~--~p~gg~~-~~~~~~ 333 (402)
T PRK06107 271 --------------SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL--VPDGAFY-LYVNCA 333 (402)
T ss_pred --------------ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc--CCCcceE-Eeeecc
Confidence 0011112222222222 33345555666677788888999887787654 3554443 333211
Q ss_pred CCCCCCchhhHHHHHhhHHHHHHHH-HHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 556 SLRGKEDQADFNELLHKVAPKIKER-MMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 556 ~~~~~~~~~~~~~~l~~~~~~i~~~-l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
...+....... ... -...+.+. +.+.|.+....... +..+++|+++++ ++++++..++.|.++.++
T Consensus 334 ~~~~~~~~~~~--~~~-~~~~~~~~l~~~~gv~v~pg~~F-g~~~~iRis~~~---~~e~l~~~l~~l~~~l~~ 400 (402)
T PRK06107 334 GLIGKTTPEGK--VLE-TDQDVVLYLLDSAGVAVVQGTAY-GLSPYFRLSIAT---SLETLEEACARIERAVAA 400 (402)
T ss_pred ccccccccccc--CCC-CHHHHHHHHHHhCCEEEeCcccc-CCCCeEEEEeCC---CHHHHHHHHHHHHHHHHh
Confidence 10000000000 000 00133434 45568655443333 334699999973 589999999988887654
No 239
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.12 E-value=1.3e-07 Score=102.80 Aligned_cols=305 Identities=11% Similarity=0.067 Sum_probs=173.3
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|....+...+.+.+.+++.+..|.+ .. ..++|+|++++...++.+.. .|...|++..-++...
T Consensus 69 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~--------------~~gd~Vlv~~P~y~~~ 134 (394)
T PRK05942 69 YPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYV--------------NPGDVVLVPSPAYPAH 134 (394)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhC--------------CCCCEEEEcCCCCcch
Confidence 4333344566777777887776754 33 36778898888766554321 1344566777777777
Q ss_pred HHHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCe
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMA 400 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~ 400 (629)
..++...|. +++.||.+.+ +.+|+++|++.+.. .+.+|+.+...+.+|.+-+ +.+|.++|++++++
T Consensus 135 ~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ 205 (394)
T PRK05942 135 FRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQ------QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIM 205 (394)
T ss_pred HHHHHHcCC---EEEEeecCCccCCccCHHHHHHhccc------cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeE
Confidence 777888888 9999999743 46999999888753 2446666677899999977 77888899999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+.+ +|.-...-.. ....+.... +... ....+.++-|.++.| .-+|.++..+ .+......... ++.
T Consensus 206 iI~De~y~~~~~~~~--~~~~~~~~~--~~~~-~~i~~~SfSK~~~~~GlRiG~i~~~~-~l~~~l~~~~~-~~~----- 273 (394)
T PRK05942 206 LVHDLCYAELAFDGY--QPTSLLEIP--GAKD-IGVEFHTLSKTYNMAGWRVGFVVGNR-HIIQGLRTLKT-NLD----- 273 (394)
T ss_pred EEEeccchhhccCCC--CCCChhhCC--Cccc-cEEEEecchhccCChhhheeeeecCH-HHHHHHHHHHh-hcc-----
Confidence 999 6654322100 000000111 1111 335566777988644 5578887643 44443211110 000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee-CCC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI-PPS 556 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~-p~~ 556 (629)
.+ .-......+-.+++ ...+.+++..++..+..+++.+.|++. ++++. +|..+.+ +|+. |..
T Consensus 274 ------~~------~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~--~~~~~~f-~~~~~~~~ 336 (394)
T PRK05942 274 ------YG------IFSALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP--PTKATMY-LWVPCPVG 336 (394)
T ss_pred ------cC------CCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec--CCCeeeE-EEEECCCC
Confidence 00 00011111112222 234556666667777788899999876 77754 3555433 3332 222
Q ss_pred CCCCCchhhHHHHHhhHHHHHHH-HHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKE-RMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~-~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.. . .++.. .+.+.|..+..+.... ...+++|+++. . + .+.+.+.|+++.
T Consensus 337 ~~----~-----------~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~-~--~---~~~l~~~l~~l~ 387 (394)
T PRK05942 337 MG----S-----------TDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI-A--D---CDRLGEALDRLK 387 (394)
T ss_pred CC----H-----------HHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec-C--C---HHHHHHHHHHHH
Confidence 11 0 12333 3446776543333222 12369999995 2 2 455555555543
No 240
>PLN02187 rooty/superroot1
Probab=99.11 E-value=1.4e-07 Score=104.44 Aligned_cols=312 Identities=10% Similarity=0.068 Sum_probs=178.0
Q ss_pred ChhHHHHHHHHHHHHHHHhC--CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVG--FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA 329 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G--~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa 329 (629)
.+....+-+.+.+++.+-.| ++..+.++|+|++++...++.+... |...|++..-+.+.+...+
T Consensus 107 ~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~--------------pGd~Vlv~~P~y~~y~~~~ 172 (462)
T PLN02187 107 GAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLAR--------------PNANILLPRPGFPHYDARA 172 (462)
T ss_pred CCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcC--------------CCCEEEEeCCCCccHHHHH
Confidence 33344444555555555444 3457889999999987666554321 3344556666666667778
Q ss_pred HHcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE-
Q psy1785 330 AFEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV- 403 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV- 403 (629)
...|+ +++.++.. ++..+|+++|++++.. .+..|+.+..++.+|.+-+ +.+|.++|+++++++.+
T Consensus 173 ~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~------~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~D 243 (462)
T PLN02187 173 AYSGL---EVRKFDLLPEKEWEIDLEGIEAIADE------NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISD 243 (462)
T ss_pred HHcCC---EEEEEeCccccCCccCHHHHHHhcCC------CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEe
Confidence 88998 89999874 4578999999887643 2456777778899999866 78888899999999999
Q ss_pred -ecCccccccccccccccccccccccCCcce-EEEeCCCCCCCCC-CccEEEEEeccc-hh---hhhhcCCCCccccCCc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVAD-SVTWNPHKLLTAP-QQCSVFLTRHQS-VL---TECHSASASYLFQKDK 476 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaD-sv~~~~HK~l~~P-~~~g~ll~r~~~-~l---~~~~~~~~~yl~~~~~ 476 (629)
+|....+-..+. .+ ... +..... .+..++-|.++.| +-+|.++..++. .+ ........ +.
T Consensus 244 E~Y~~l~f~~~~~-~s----~~~--~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~-~~----- 310 (462)
T PLN02187 244 EVYDRTIFGDNPF-VS----MGK--FASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQ-NL----- 310 (462)
T ss_pred ccccccccCCCCc-ee----HHH--hccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHH-hc-----
Confidence 776543211110 00 001 111012 4556889996666 448887774432 11 11101000 00
Q ss_pred CCCcccCCCCccCCCCCCcchHHHHHHHHhc---ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee
Q psy1785 477 FYDTKYDSGDKHIQCGRKPDVLKFWFMWKAK---GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~---G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~ 553 (629)
.+..+ ...+..+++..++ ..+-+++..+...+..+++.+.|++++++.... .|.-+++.|.-.
T Consensus 311 -----------~~~~~--~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~~~~-~P~gg~fl~~~l 376 (462)
T PLN02187 311 -----------DVTPD--PATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVVCPK-KPESCTYLLTKL 376 (462)
T ss_pred -----------cccCC--CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCC-CCCEeEEEEeec
Confidence 00000 0112222222222 234456666777778888999999886553333 466656555422
Q ss_pred CCC-CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 554 PPS-LRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 554 p~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.. ..+..+. ...+.+.+.+.|.++..+... +..++||++++. .++.++..++.|.++.+
T Consensus 377 ~~~~~~~~~~~----------~~~~~~ll~~~gV~v~pG~~f-g~~~~iRis~~~---~~e~l~~al~rL~~~l~ 437 (462)
T PLN02187 377 ELSLMDNIKDD----------IDFCVKLAREENLVFLPGDAL-GLKNWMRITIGV---EAHMLEDALERLKGFCT 437 (462)
T ss_pred ChhhCCCCCCH----------HHHHHHHHhhCCEEEECcccc-CCCCeEEEEeCC---CHHHHHHHHHHHHHHHH
Confidence 211 1111000 012234456778655443333 335799999963 47777777777766543
No 241
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.11 E-value=1e-07 Score=103.56 Aligned_cols=297 Identities=14% Similarity=0.117 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHhC--CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC
Q psy1785 257 LMEEHVLAQMRTIVG--FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL 334 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G--~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl 334 (629)
.+...+.+++.+..+ ++..+.++++|++++...++.... .|...|+++..++..+...+...|+
T Consensus 77 ~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--------------~~gd~Vli~~p~~~~~~~~~~~~g~ 142 (394)
T PRK06836 77 EVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAIL--------------NPGDEVIVFAPYFVEYRFYVDNHGG 142 (394)
T ss_pred HHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhc--------------CCCCEEEEcCCCCccHHHHHHHcCC
Confidence 333444444444333 345678999999988665554331 1334566777777778888888898
Q ss_pred CCCCEEEEecCCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHH------cCCeEEE-
Q psy1785 335 GSDNVYLIKTDAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAE------YDMADSV- 403 (629)
Q Consensus 335 g~~~v~~V~~d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~------~~~~lhV- 403 (629)
+++.++++++ +.+|+++|++++.. .+.+|+.+...+.+|.+.| +.+|.++|++ |++++.+
T Consensus 143 ---~v~~v~~~~~~~~~d~~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~D 213 (394)
T PRK06836 143 ---KLVVVPTDTDTFQPDLDALEAAITP------KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISD 213 (394)
T ss_pred ---EEEEEecCCccCcCCHHHHHhhcCc------CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEe
Confidence 9999999876 78999999998854 2446677788999999877 5556666888 8999988
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhh--hhcCCCCccccCCcCCC
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTE--CHSASASYLFQKDKFYD 479 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~--~~~~~~~yl~~~~~~~~ 479 (629)
+|....+-..+ ...++. ..+ -..+..+..|.++.| ..+|.++..+. ..+. .... -.+....
T Consensus 214 e~y~~~~~~~~~--~~~~~~----~~~--~~i~~~S~SK~~~~pGlRiG~~~~~~~-~~~~~~~~~~-~~~~~~~----- 278 (394)
T PRK06836 214 EPYREIVYDGAE--VPYIFK----YYD--NSIVVYSFSKSLSLPGERIGYIAVNPE-MEDADDLVAA-LVFANRI----- 278 (394)
T ss_pred ccccccccCCCC--CCChHH----ccC--cEEEEecchhhccCcceeeEEEecCHH-HhhhHHHHHH-HHHHhhc-----
Confidence 66553321100 000000 011 257788999999854 56788877542 2110 0000 0000000
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRG 559 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~ 559 (629)
.+.-....+......+.+. ++. ..++..+..+.+.+.|+++ |+++.. |.-+.+.+--.|. ..
T Consensus 279 ----------~~~~~~~~~~q~~~~~~l~-~~~--~~~~~~~~r~~l~~~L~~~-g~~~~~--~~gg~~~~~~~~~-~~- 340 (394)
T PRK06836 279 ----------LGFVNAPALMQRVVAKCLD-ATV--DVSIYKRNRDLLYDGLTEL-GFECVK--PQGAFYLFPKSPE-ED- 340 (394)
T ss_pred ----------cccccCCHHHHHHHHHHhC-ChH--HHHHHHHHHHHHHHHHHhC-CCEeec--CCceEEEEEeCCC-CC-
Confidence 0000011111222222222 121 1233445667788888887 787653 5444333321221 10
Q ss_pred CCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 560 KEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 560 ~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
. .++.+.+.+.|..+....... ..+++|++++ .++++++..++.|+++.+
T Consensus 341 ---~-----------~~~~~~l~~~gv~v~~g~~f~-~~~~iRi~~~---~~~~~~~~~i~~l~~~l~ 390 (394)
T PRK06836 341 ---D-----------VAFCEKAKKHNLLLVPGSGFG-CPGYFRLSYC---VDTETIERSLPAFEKLAK 390 (394)
T ss_pred ---H-----------HHHHHHHHhCCEEEECchhcC-CCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 0 245567777886554433322 2368999995 368898888888877654
No 242
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.11 E-value=6e-08 Score=104.22 Aligned_cols=288 Identities=10% Similarity=0.076 Sum_probs=174.0
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCC-eEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPR-LVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~-~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.+..+.+++.+|++..+.++++|++++...++.+... |. ..|+++.-++......++..|. +
T Consensus 62 ~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~--------------~g~~~vlv~~p~y~~~~~~~~~~g~---~ 124 (364)
T PRK04781 62 PGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCV--------------PGRDAVLVTPPVFGMYAVCARLQNA---P 124 (364)
T ss_pred HHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcC--------------CCCCeEEEcCCChHHHHHHHHHcCC---E
Confidence 5666778888898878899999999886655543211 22 3455555554455566788898 9
Q ss_pred EEEEecCC--CC-CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--cCCeEEE--ecCccccc
Q psy1785 339 VYLIKTDA--RG-RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE--YDMADSV--TWNPHKLL 411 (629)
Q Consensus 339 v~~V~~d~--~g-~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~--~~~~lhV--A~gg~~l~ 411 (629)
++.||.++ +| .+|++++.+.+.. . .+-+|..+..++.+|.+-|.+++.++++. .+.++++ +|.....
T Consensus 125 ~~~v~~~~~~~~~~~d~~~l~~~~~~---~--~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~- 198 (364)
T PRK04781 125 LVEVPLVDGADGFHADVPAIVAAALA---S--NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSD- 198 (364)
T ss_pred EEEEecCCCccCCCcCHHHHHHHHhc---c--CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcC-
Confidence 99999842 33 6788887655432 1 24456667899999999999999888875 3678877 6664321
Q ss_pred cccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCC
Q psy1785 412 TAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 490 (629)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 490 (629)
.+ .+...+.. .+. =.+..++-|.++.| .=.|.++. ++++..........| +
T Consensus 199 -~~-~~~~~~~~----~~~--vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~~l~~~~~~~-----------------~-- 250 (364)
T PRK04781 199 -VP-SAVGLLAR----YDN--LAVLRTLSKAHALAAARIGSLIA-NAELIAVLRRCQAPY-----------------P-- 250 (364)
T ss_pred -Cc-chHHHHhh----CCC--EEEEecChhhcccccceeeeeeC-CHHHHHHHHhccCCC-----------------C--
Confidence 10 00000000 111 25678999999854 45777665 444444322111100 0
Q ss_pred CCCCcchHHHHHHHHhcCh---hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHH
Q psy1785 491 CGRKPDVLKFWFMWKAKGT---DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFN 567 (629)
Q Consensus 491 ~sr~~~al~~w~~l~~~G~---~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~ 567 (629)
. ..+...++..++.. +-+.+.+++..+..+.+.+.|++.+++..+. ++..+-+.+++ |.
T Consensus 251 ~----~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~-p~~g~f~~~~~-~~------------ 312 (364)
T PRK04781 251 V----PTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVY-PSQGNFLLVRF-DD------------ 312 (364)
T ss_pred C----CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEC-CCCCcEEEEEc-CC------------
Confidence 0 11222222222322 2344556666777888999999888875444 33433222332 10
Q ss_pred HHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 568 ELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 568 ~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..++.+.|.++|..+.......+..+++|++++ +.+++++++++|+++.
T Consensus 313 ------~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 313 ------AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred ------HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 025667788888765443333344569999997 6899999999998864
No 243
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.11 E-value=7.7e-08 Score=104.75 Aligned_cols=295 Identities=13% Similarity=0.089 Sum_probs=166.7
Q ss_pred CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCC--CCC
Q psy1785 272 FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDA--RGR 349 (629)
Q Consensus 272 ~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~--~g~ 349 (629)
++..+.++|+|++++...++.+... |...|++..-++..+...+...|+ .++.++++. ++.
T Consensus 93 ~~~~~i~~t~G~~~al~~~~~~l~~--------------~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~ 155 (401)
T TIGR01264 93 IEADDVVLCSGCSHAIEMCIAALAN--------------AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWE 155 (401)
T ss_pred CCHHHEEECcChHHHHHHHHHHhCC--------------CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCC
Confidence 3445788999999987666543321 222345555555567778889998 899988864 468
Q ss_pred CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeEEE--ecCcccccccccccccccccc
Q psy1785 350 MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRR 424 (629)
Q Consensus 350 ~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~ 424 (629)
+|++.|++.+.. .+.+|+.+...+.+|.+- ++++|.++|+++++++++ +|.....-..+ +. ...
T Consensus 156 ~d~~~l~~~~~~------~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~--~~---~~~ 224 (401)
T TIGR01264 156 IDLKQLESLIDE------KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGAT--FE---PLA 224 (401)
T ss_pred CCHHHHHHHhcc------CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcc--cc---cHH
Confidence 999999887753 134566677888999885 488888899999999999 77654321110 00 000
Q ss_pred ccccCCcc-eEEEeCCCCCCCCC-CccEEEEEecc-chhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHH
Q psy1785 425 NYVIEVVA-DSVTWNPHKLLTAP-QQCSVFLTRHQ-SVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFW 501 (629)
Q Consensus 425 ~~~i~~ga-Dsv~~~~HK~l~~P-~~~g~ll~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w 501 (629)
. +.... -.++.++-|.++.| .-+|.++..+. ..+......- ..+.... + +........+-
T Consensus 225 ~--~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~-~~~~~~~-----------~---~~~~~~q~a~~ 287 (401)
T TIGR01264 225 S--LSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGL-VKLSQRI-----------L---GPCTIVQGALP 287 (401)
T ss_pred H--cCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHH-HHHhhcc-----------C---CCCcHHHHHHH
Confidence 1 11101 25678899975444 55888876542 1111110000 0000000 0 00011111111
Q ss_pred HHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCC-CCCCCCchhhHHHHHhhHHHHHHHH
Q psy1785 502 FMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPP-SLRGKEDQADFNELLHKVAPKIKER 580 (629)
Q Consensus 502 ~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~-~~~~~~~~~~~~~~l~~~~~~i~~~ 580 (629)
..+.....+-+++..++..+..+++.+.|++.++++.. .|.-+++++--.+. .+.+..+ ..++.++
T Consensus 288 ~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~--~p~~g~f~~~~~~~~~~~~~~~-----------~~~~~~~ 354 (401)
T TIGR01264 288 SILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPV--MPSGAMYMMVGIEMEHFPEFKN-----------DVEFTER 354 (401)
T ss_pred HHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCccc--CCCeeeEEEEEecccccCCCCC-----------HHHHHHH
Confidence 22222123445666777777888899999988777644 35555554432111 0100000 0245566
Q ss_pred HH-hcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 581 MM-KSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 581 l~-~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+. +.|..+...... +..+++|++++ . .+++++..++.|.++.++
T Consensus 355 l~~~~gI~v~pg~~f-~~~~~iRis~~-~--~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 355 LVAEQSVFCLPGSCF-EYPGFFRVVLT-V--PVVMMEEACSRIQEFCER 399 (401)
T ss_pred HHHhCCEEEeCchhc-CCCCeEEEEEc-C--CHHHHHHHHHHHHHHHhc
Confidence 65 678654433222 23469999996 2 478888888888877654
No 244
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.09 E-value=1e-08 Score=107.49 Aligned_cols=309 Identities=15% Similarity=0.227 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC
Q psy1785 257 LMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG 335 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg 335 (629)
.+-...+..+-+++|+.+ .....+|.+|.--+.....+..+ .| ..+ .|+-+...|+|-.|++...|+
T Consensus 56 ~ltn~l~~d~~~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~-r~---------~a~-~Viw~ridqkSc~kai~~AGl- 123 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSVKSCFVVPMATGMSLTLCLLALRM-RP---------KAK-YVIWPRIDQKSCFKAIERAGL- 123 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTHCEEEEESS-HHHHHHHHHHHHHH-HC---------T---EEEEEEEETHHHHHHHHHTT--
T ss_pred HHHHHHHHHHHHHcCCccccceEEEecccccHHHHHHHHHhc-cc---------CCc-eEEEeeccccchHHHHHhcCC-
Confidence 344555556777889986 45678888885433333333322 11 123 466788999999999999999
Q ss_pred CCCEEEEecCC--C-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 336 SDNVYLIKTDA--R-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF-DPIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 336 ~~~v~~V~~d~--~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i-dpl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
+++.||... + -..|.+.+++.|++. |..+.+++.+.-+-+.+-. |++.+|+++|++|+++..| |||--.
T Consensus 124 --~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~ 198 (389)
T PF05889_consen 124 --EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQS 198 (389)
T ss_dssp --EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-
T ss_pred --eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhH
Confidence 999999642 2 357788888888554 5566778888777777766 5599999999999999999 888622
Q ss_pred cccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccC
Q psy1785 410 LLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHI 489 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 489 (629)
-.. -..++.. ...-+ +|.++-+.-|-+.+|.|-+++...++..+...-. .|=
T Consensus 199 ~~~-----~~~i~~a-~~~GR-vda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~---~Yp------------------ 250 (389)
T PF05889_consen 199 SKC-----MHLIQQA-WRVGR-VDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSK---EYP------------------ 250 (389)
T ss_dssp HHH-----HHHHHHH-HHHST-CSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHH---TSH------------------
T ss_pred HHH-----HHHHHHH-HhcCC-cceeeeecCCCEEecCCCcEEEecCHHHHHHHHH---Hhh------------------
Confidence 110 0000000 01234 8888888889999999988888877655544321 121
Q ss_pred CCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC---CcEEEccCCCce-EEEEEeeCCCCCCCCch
Q psy1785 490 QCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP---GFKLVLDEPECT-NISFWYIPPSLRGKEDQ 563 (629)
Q Consensus 490 ~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~---g~~l~~~~p~~~-~v~F~~~p~~~~~~~~~ 563 (629)
+|-+ ..+-+...+..+|..|+.+.+....++-.++.++|++.. +-+ +.+.|.-. .+.|.. +.+.....
T Consensus 251 --GRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~-ll~~p~N~is~a~tl--~~l~~~~~- 324 (389)
T PF05889_consen 251 --GRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGER-LLETPRNHISMAFTL--DTLYEISQ- 324 (389)
T ss_dssp --SHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEE-BSSSTT-SSEEEEE---TTCCTCCS-
T ss_pred --hhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-hcCCCCCCeeEEEEC--ccchhhcc-
Confidence 1111 346677788889999999999999999999999887631 333 33233322 233333 22221110
Q ss_pred hhHHHHHhhHHHHHHHHHHhcCcE---EEeeeecCCc--------cceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 564 ADFNELLHKVAPKIKERMMKSGSM---MITYQPIHAL--------PNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~l~~~G~~---~i~~~~~~~~--------~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
+-...+...|..+|.. .+.. .+.+. ..+|-++.+ ...++||||.+++.|+++.
T Consensus 325 --------k~~~~lgs~Lf~R~VsG~RvV~~-~~~~~tsh~~~yp~~Ylt~Asa-iG~~~eevd~~v~rL~k~i 388 (389)
T PF05889_consen 325 --------KDGTFLGSMLFKRGVSGIRVVTP-GGKKQTSHSSNYPCPYLTAASA-IGMTREEVDYFVKRLDKII 388 (389)
T ss_dssp --------SHHHHHHHHHHHTTEESSEEEET-SSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHHHHHHH
T ss_pred --------chhhhHHHHHHhCCcccceeecc-CCCcccccCCCCchHHHHHHHH-hCCCHHHHHHHHHHHHHHh
Confidence 1113466677777632 1110 00110 146887665 8999999999999999875
No 245
>PRK07683 aminotransferase A; Validated
Probab=99.09 E-value=1.7e-07 Score=101.56 Aligned_cols=321 Identities=12% Similarity=0.081 Sum_probs=183.6
Q ss_pred HHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCC--CCC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCC
Q psy1785 236 QWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGF--QGG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPR 312 (629)
Q Consensus 236 ~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~--~~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~ 312 (629)
+.+...+..+...|...+....+.+.+.+++.+-.|+ +.. +.++|+|+++++..++.+... +.
T Consensus 48 ~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~--------------~g 113 (387)
T PRK07683 48 EAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILE--------------PG 113 (387)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCC--------------CC
Confidence 3344333333333444455666777777777666565 334 789999999987766543211 33
Q ss_pred eEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCC-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHH
Q psy1785 313 LVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDAR-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIP 388 (629)
Q Consensus 313 ~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ 388 (629)
..|++..-+......++..+|. +++.++.+++ ..+|+++|++.+.. .+.+|+.....+.+|.+ ++++
T Consensus 114 d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~i~i~~p~NPtG~~~s~~~~~ 184 (387)
T PRK07683 114 TEVILPAPIYPGYEPIIRLCGA---KPVFIDTRSTGFRLTAEALENAITE------KTRCVVLPYPSNPTGVTLSKEELQ 184 (387)
T ss_pred CEEEEcCCCccchHHHHHHcCC---EEEEeecCcccCCCCHHHHHHhcCc------CceEEEEeCCCCCCCcCCCHHHHH
Confidence 3466666665567778888898 9999998765 46788999887753 24456677788889987 4588
Q ss_pred HHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhc
Q psy1785 389 AIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHS 465 (629)
Q Consensus 389 ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~ 465 (629)
+|.++|+++++++++ +|.....-.++. + +.... +... -..+..++.|.++.| +-+|.+.... .+.+....
T Consensus 185 ~l~~~~~~~~~~ii~De~y~~~~~~~~~~--~-~~~~~--~~~~-~vi~~~s~SK~~~~pGlRiG~i~~~~-~l~~~~~~ 257 (387)
T PRK07683 185 DIADVLKDKNIFVLSDEIYSELVYEQPHT--S-IAHFP--EMRE-KTIVINGLSKSHSMTGWRIGFLFAPS-YLAKHILK 257 (387)
T ss_pred HHHHHHHHcCeEEEEecccccceeCCCcC--C-hhhcc--CCcC-CeEEEeeccccccCccceeEEEEcCH-HHHHHHHH
Confidence 889999999999999 666432211100 0 00111 1111 246778999999866 3367776543 34433211
Q ss_pred CCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCc
Q psy1785 466 ASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPEC 545 (629)
Q Consensus 466 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~ 545 (629)
. ..|.. .+........+-..|+ .|..-+++..++..+..+++.+.|.+. ++.+. +|..
T Consensus 258 ~-~~~~~-----------------~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~--~~~~ 315 (387)
T PRK07683 258 V-HQYNV-----------------TCASSISQYAALEALT-AGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE--KPTG 315 (387)
T ss_pred H-HHhcc-----------------CCCChHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCe
Confidence 1 01110 1111111111111122 233345555666677788888888876 77644 4555
Q ss_pred eEEEEEeeCC-CCCCCCchhhHHHHHhhHHHHHHHH-HHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHH
Q psy1785 546 TNISFWYIPP-SLRGKEDQADFNELLHKVAPKIKER-MMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEI 622 (629)
Q Consensus 546 ~~v~F~~~p~-~~~~~~~~~~~~~~l~~~~~~i~~~-l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i 622 (629)
+.+.+...|. ... . .++... +.+.|..+........ ..++||++++ . +++++...++.|
T Consensus 316 ~~~~~~~~~~~~~~----~-----------~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~-~--~~~~~~~al~~l 377 (387)
T PRK07683 316 AFYLFPSIGHFTMS----S-----------FDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA-Y--SIETLKEGLDRL 377 (387)
T ss_pred eEEEEEecccCCCC----H-----------HHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec-C--CHHHHHHHHHHH
Confidence 5443322221 110 0 123333 4566765444332221 2369999996 3 577888877777
Q ss_pred HHHh
Q psy1785 623 ERLG 626 (629)
Q Consensus 623 ~~l~ 626 (629)
.++.
T Consensus 378 ~~~l 381 (387)
T PRK07683 378 EAFL 381 (387)
T ss_pred HHHH
Confidence 7654
No 246
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.09 E-value=1.2e-07 Score=106.64 Aligned_cols=316 Identities=12% Similarity=0.082 Sum_probs=179.1
Q ss_pred cccChhHHHHHHHHHHHHHHHh--CCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIV--GFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~--G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|....+...+-+.+.+++.+-- +++..+.++++|++++...++.+.. .|...|+++.-++..+.
T Consensus 181 Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~--------------~~Gd~Vli~~P~y~~y~ 246 (517)
T PRK13355 181 YSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALL--------------DDGDEVLIPSPDYPLWT 246 (517)
T ss_pred CCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhC--------------CCCCEEEEcCCCCcCHH
Confidence 4333333334344444443322 3555789999999998766654321 13445667777777888
Q ss_pred HHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~l 401 (629)
..+...|. +++.++++++ +.+|+++|++++.. .+..|+.+..++.+|.+-+ +.+|.++|++|++++
T Consensus 247 ~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~------~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~i 317 (517)
T PRK13355 247 ACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITS------RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLII 317 (517)
T ss_pred HHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCc------CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEE
Confidence 88899998 8999998754 57999999988753 3456777788999999877 888899999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEE-eCCCCCCCCC-CccEEEEEe-ccchhhhhhcCCCCccccCCc
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVT-WNPHKLLTAP-QQCSVFLTR-HQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~-~~~HK~l~~P-~~~g~ll~r-~~~~l~~~~~~~~~yl~~~~~ 476 (629)
++ +|.-...-..+. .+ .. .+....-.++ .++.|.++.| +-+|.+++. +.......... -..+..
T Consensus 318 i~DE~Y~~~~~~~~~~-~s----~~--~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~-l~~~~~--- 386 (517)
T PRK13355 318 FSDEIYDRLVMDGLEH-TS----IA--SLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEG-LNMLAN--- 386 (517)
T ss_pred EEehhhhhhcCCCCCc-cc----HH--HhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHH-HHHHhc---
Confidence 99 665432211100 00 00 0111122343 5678987654 337887753 33222110000 000000
Q ss_pred CCCcccCCCCccCCCCCCcchHHHHHHHHhcC-hhhHHHHH---HHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEe
Q psy1785 477 FYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKG-TDGLEAHI---DKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWY 552 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G-~~G~~~~~---~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~ 552 (629)
...|. ..+..+++..++. .+.+.+++ ++..+..+++.+.|++++|+++. +|..+.++|--
T Consensus 387 -----------~~~~~---~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~~~~--~p~g~fy~~~~ 450 (517)
T PRK13355 387 -----------MRLCS---NVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGISAV--KPKAAFYIFPK 450 (517)
T ss_pred -----------CcCCc---ChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCcccC--CCCeeeEEEee
Confidence 00111 2233333333332 12223332 34556678899999998898764 46666655522
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+....+..++ ...+.+.|.++|.++..+.... +..++||+++. .++++|+..++.|.++.+
T Consensus 451 l~~~~~~~~~~----------~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~l~~a~~rl~~~~~ 513 (517)
T PRK13355 451 IDVKKFNIHDD----------EQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLEDLEDAMDRLADFFS 513 (517)
T ss_pred cCcccCCCCCH----------HHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHHHHHHHHHHHHHHH
Confidence 22111000001 0123456677887655444332 23469999984 577888888877776643
No 247
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.08 E-value=2.1e-07 Score=103.80 Aligned_cols=333 Identities=14% Similarity=0.104 Sum_probs=185.9
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|....+...+-+.+.+++.+-.|++ ..+.++|+|++++...++.+.... |...|++..-++....
T Consensus 111 Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~-------------~gD~Vlv~~P~y~~y~ 177 (481)
T PTZ00377 111 YTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGD-------------PSDGVMIPIPQYPLYS 177 (481)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccC-------------CCCEEEECCCCchhHH
Confidence 3334444555566666666655544 468899999999877666543211 3445777777888888
Q ss_pred HHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~l 401 (629)
..++..|. +++.|+++++ +.+|+++|++++....+++..+.+|+.+...+.+|.+-+ +.+|+++|+++++++
T Consensus 178 ~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~i 254 (481)
T PTZ00377 178 AAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVL 254 (481)
T ss_pred HHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEE
Confidence 89999998 9999998753 479999999999765555445656666678899999987 888889999999999
Q ss_pred EE--ecCccccccc-cccccccccc-cccccCC--cce-EEEeCCCCCC-CC-CCccEEEEE--eccchhhhhhcCCCCc
Q psy1785 402 SV--TWNPHKLLTA-PQQCSVFLTR-RNYVIEV--VAD-SVTWNPHKLL-TA-PQQCSVFLT--RHQSVLTECHSASASY 470 (629)
Q Consensus 402 hV--A~gg~~l~~~-~~~~~~~l~~-~~~~i~~--gaD-sv~~~~HK~l-~~-P~~~g~ll~--r~~~~l~~~~~~~~~y 470 (629)
.+ +|+-..+-.. +. .+ +... ..+.-+. +.. .+..+.-|.+ +. -+-+|.+.+ .++.+..........+
T Consensus 255 I~De~Y~~l~~~~~~~~-~s-~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~ 332 (481)
T PTZ00377 255 MADEVYQENIYDGEKPF-IS-FRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASIN 332 (481)
T ss_pred EEehhhHhhccCCCCCc-cc-HHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhhee
Confidence 98 6654322110 00 00 0000 0000000 012 3445889965 32 344788776 2444443321111000
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHh--cChhh---HHHHHH----HHHHHHHHHHHHHhcCCCcEEEcc
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKA--KGTDG---LEAHID----KSFDNAKYFTDKIRHRPGFKLVLD 541 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~--~G~~G---~~~~~~----~~~~la~~l~~~L~~~~g~~l~~~ 541 (629)
+ |.....-..+..+++. .+... +.+..+ +..+..+.+.+.|++++|+++.
T Consensus 333 ~-------------------~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~-- 391 (481)
T PTZ00377 333 L-------------------CSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVSCQ-- 391 (481)
T ss_pred c-------------------CCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEee--
Confidence 0 1111111112222211 12221 222222 2355677788999888898865
Q ss_pred CCCceEEEE-Eee-CCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCC--ccceEEEeecCCCCCHHHHHH
Q psy1785 542 EPECTNISF-WYI-PPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHA--LPNFFRLVLQNSALDHSDMDY 617 (629)
Q Consensus 542 ~p~~~~v~F-~~~-p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~--~~~~lR~~~~n~~~t~edid~ 617 (629)
.|+-+...| ++. |....+. .. ...+..-...+...+.+.|..++.+..+.. ..++||++++ +++++++.
T Consensus 392 ~p~gg~fl~~~~~l~~~~~~~---~~-~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~---~~~e~l~~ 464 (481)
T PTZ00377 392 PVEGAMYAFPRIELPEKAIQE---AK-ERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL---PPEEQIEE 464 (481)
T ss_pred cCCeeEEEEeeccCchhhHHH---HH-hcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC---CCHHHHHH
Confidence 466555544 221 2111000 00 000000001124555667876554433321 2358999995 66888998
Q ss_pred HHHHHHHHhh
Q psy1785 618 FIDEIERLGH 627 (629)
Q Consensus 618 l~~~i~~l~~ 627 (629)
.++.|+++.+
T Consensus 465 ~l~rl~~~~~ 474 (481)
T PTZ00377 465 MVKKIKEFHE 474 (481)
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 248
>KOG1360|consensus
Probab=99.07 E-value=3.8e-08 Score=101.38 Aligned_cols=256 Identities=14% Similarity=0.180 Sum_probs=174.8
Q ss_pred CCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHH
Q psy1785 310 CPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPA 389 (629)
Q Consensus 310 ~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~e 389 (629)
.|.++|+..+.-|.|+....+-.+. .-.+.. .-|+++|++.++..- -.+|.+|..-..-++.|++-||+|
T Consensus 255 lpgcei~SD~gNHASMI~GIrns~v---~K~IFr-----HND~~hL~~lL~~~~--~svPKivAFEtVhSM~Gavcplee 324 (570)
T KOG1360|consen 255 LPGCEIFSDEGNHASMIQGIRNSRV---PKHIFR-----HNDLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEE 324 (570)
T ss_pred CCCcEEeccccchHHHHHHhhhcCC---cceeec-----cCCHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHH
Confidence 5899999999999999888777776 222222 468999999998742 347889999999999999999999
Q ss_pred HHHHHHHcCCeEEE----ecC---ccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhh
Q psy1785 390 IADICAEYDMADSV----TWN---PHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTE 462 (629)
Q Consensus 390 i~~i~~~~~~~lhV----A~g---g~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~ 462 (629)
|.+++++||..-.+ |.| ++..-.. +... -+++ +|+++...-|.+|+ .|..+...+.+...
T Consensus 325 lcDvah~yGAiTFlDEVHAVGlYG~rGaGvg--------erdG-vm~k-vDiIsGTLgKafGc---VGGYIAat~~LvDm 391 (570)
T KOG1360|consen 325 LCDVAHKYGAITFLDEVHAVGLYGPRGAGVG--------ERDG-VMHK-VDIISGTLGKAFGC---VGGYIAATRKLVDM 391 (570)
T ss_pred HHHHHHHhCceeeeehhhhhccccCCCCCcc--------ccCC-cchh-hhhcccchhhhccc---ccceehhhhhHHHH
Confidence 99999999987776 333 2221111 2222 1466 99999999999986 35555556566766
Q ss_pred hhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC
Q psy1785 463 CHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE 542 (629)
Q Consensus 463 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~ 542 (629)
..+..+.+||...-+ -.--+.++..--.++ +.+|. ...+...++.+|+++.|.++ |+-++. .
T Consensus 392 iRSyAaGFIFTTSLP-------------P~vl~GAleaVr~lk--~~eg~-~lR~~hqrnv~~~kq~l~~~-GiPVi~-~ 453 (570)
T KOG1360|consen 392 IRSYAAGFIFTTSLP-------------PMVLAGALEAVRILK--SEEGR-VLRRQHQRNVKYVKQLLMEL-GIPVIP-N 453 (570)
T ss_pred HHHhcCceEEecCCC-------------hHHHHhHHHHHHHHh--hhhhH-HHHHHHHHHHHHHHHHHHHc-CCcccC-C
Confidence 667788898865321 000123333333333 34553 33455666889999999887 998775 3
Q ss_pred CCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEee----eecCCccceEEEeecCCCCCHHHHHHH
Q psy1785 543 PECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITY----QPIHALPNFFRLVLQNSALDHSDMDYF 618 (629)
Q Consensus 543 p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~----~~~~~~~~~lR~~~~n~~~t~edid~l 618 (629)
| ..+|-.++-. +. ++.++.+.|+.+..+++.. +...|. .-||+..+ |..|.+-++.|
T Consensus 454 p-SHIiPv~vgd---------a~-------l~~~~sd~Li~~h~iYvQaINyPTV~rG~-E~LRiaPT-P~HT~~mm~~l 514 (570)
T KOG1360|consen 454 P-SHIIPVRVGD---------AA-------LAKQASDILISKHNIYVQAINYPTVARGT-ERLRIAPT-PHHTPQMMNIL 514 (570)
T ss_pred C-cceeeeeccC---------HH-------HHHHHHHHHHHhcCeEEEeccCCcccccc-eeeecCCC-CCCCHHHHHHH
Confidence 3 4566666421 11 2346677787777677652 222343 36999997 99999999999
Q ss_pred HHHHHHH
Q psy1785 619 IDEIERL 625 (629)
Q Consensus 619 ~~~i~~l 625 (629)
++.+...
T Consensus 515 v~~l~~v 521 (570)
T KOG1360|consen 515 VNALLDV 521 (570)
T ss_pred HHHHHHH
Confidence 9988754
No 249
>PRK08068 transaminase; Reviewed
Probab=99.06 E-value=3.9e-07 Score=98.82 Aligned_cols=304 Identities=9% Similarity=0.047 Sum_probs=173.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|...+....+.+.+.+++.+-.|.+ .. +.++|+|++++...++.+-. .|...|++..-++...
T Consensus 66 Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~--------------~~gd~vlv~~P~y~~~ 131 (389)
T PRK08068 66 YSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLM--------------NPGDTILVPDPGYPDY 131 (389)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhC--------------CCCCEEEEcCCCCcch
Confidence 4334445566666666766666753 34 57889998887665433211 1344567777788888
Q ss_pred HHHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHcCCe
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI---PAIADICAEYDMA 400 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl---~ei~~i~~~~~~~ 400 (629)
..+++..|+ +++.||++++ ..+|+++|++.+.. .+.+|..+...+.+|.+-+. ++|.++|++++++
T Consensus 132 ~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ 202 (389)
T PRK08068 132 LSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAE------KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIG 202 (389)
T ss_pred HHHHHhcCC---EEEEeecccccCCCCCHHHHHHhccc------cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeE
Confidence 888899998 9999999753 46899999888743 23456666678899988776 5667789999999
Q ss_pred EEE--ecCcccccc-ccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 401 DSV--TWNPHKLLT-APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 401 lhV--A~gg~~l~~-~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
+.+ +|+....-. .+. + ++... +... -..++.++-|.++.| +-+|.++. ++.++.........+.
T Consensus 203 ii~Deay~~~~~~~~~~~--s-~~~~~--~~~~-~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~~~~~~~~----- 270 (389)
T PRK08068 203 VVHDFAYGAIGFDGQKPV--S-FLQTP--GAKD-VGIELYTLSKTFNMAGWRVAFAVG-NESVIEAINLLQDHLF----- 270 (389)
T ss_pred EEEehhhhhhccCCCCCc--C-hhhCC--CccC-CEEEEecchhccCCccceeEeEec-CHHHHHHHHHHHhhcc-----
Confidence 999 775432111 000 0 00100 1111 236677899999754 33677764 4444433211111100
Q ss_pred CCCcccCCCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEE-EEeeC
Q psy1785 477 FYDTKYDSGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNIS-FWYIP 554 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~-F~~~p 554 (629)
.+-.. ....+-.++. -+.+-+++..++..+..+++.+.|++. |+.+. +|.-+.++ +.+ |
T Consensus 271 --------------~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~--~~~g~~~~~v~~-~ 331 (389)
T PRK08068 271 --------------VSLFGAIQDAAIEALL-SDQSCVAELVARYESRRNAFISACREI-GWEVD--APKGSFFAWMPV-P 331 (389)
T ss_pred --------------CCCChHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc--CCCeeEEEEEEC-C
Confidence 11010 0111111121 133456677777788888899999887 77643 45554432 332 2
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
+... ..++.+.|.+ .|..+........ ..+++|+++. . .++.+...++.|.+
T Consensus 332 ~~~~---------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~-~--~~~~l~~al~~l~~ 385 (389)
T PRK08068 332 KGYT---------------SEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL-T--DEERLREAVERIGK 385 (389)
T ss_pred CCCC---------------HHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc-C--CHHHHHHHHHHHHH
Confidence 2111 1256677775 5765433222211 1358999996 2 34555555555543
No 250
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.06 E-value=2.5e-08 Score=107.24 Aligned_cols=219 Identities=17% Similarity=0.215 Sum_probs=144.9
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----H
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----I 325 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i 325 (629)
...|....+|+. ++.|-|. ..+..+++|..|+..++.+... +...|+++...... +
T Consensus 52 ~gnPt~~~le~~----la~Le~g--~~a~~~~SGmaAi~~~l~~ll~--------------~Gd~iv~~~~~Y~~t~~~~ 111 (386)
T PF01053_consen 52 YGNPTVRALEQR----LAALEGG--EDALLFSSGMAAISAALLALLK--------------PGDHIVASDDLYGGTYRLL 111 (386)
T ss_dssp TC-HHHHHHHHH----HHHHHT---SEEEEESSHHHHHHHHHHHHS---------------TTBEEEEESSSSHHHHHHH
T ss_pred cccccHHHHHHH----HHHhhcc--cceeeccchHHHHHHHHHhhcc--------------cCCceEecCCccCcchhhh
Confidence 346777666665 6677664 3467777777666555554322 23345555554333 3
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcC-CeEEE-
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYD-MADSV- 403 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~-~~lhV- 403 (629)
.+.....|+ ++..++. .|+++|++++++ .+.+|.+-..++.+.-+-||++|+++++++| +.+.|
T Consensus 112 ~~~l~~~gv---~v~~~d~-----~d~~~l~~~l~~------~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVD 177 (386)
T PF01053_consen 112 EELLPRFGV---EVTFVDP-----TDLEALEAALRP------NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVD 177 (386)
T ss_dssp HHCHHHTTS---EEEEEST-----TSHHHHHHHHCT------TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEE
T ss_pred hhhhcccCc---EEEEeCc-----hhHHHHHhhccc------cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEee
Confidence 334555688 7877763 578888888876 4668888899999999999999999999999 99999
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEec-cchhhhhhcCCCCccccCCcCCC
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRH-QSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~-~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
.|+......+ ++.|||.++-+..|++++.-. .|++.+++ ..+........ .
T Consensus 178 nT~atp~~~~p--------------L~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~--~--------- 232 (386)
T PF01053_consen 178 NTFATPYNQNP--------------LELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR--R--------- 232 (386)
T ss_dssp CTTTHTTTC-G--------------GGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH--H---------
T ss_pred ccccceeeecc--------------CcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh--h---------
Confidence 7777644332 455899999999999986543 67777766 23332211000 0
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
..|-......+|+.++ |..-+.-++++..++|..+.+.|++.|.++-+
T Consensus 233 ----------~~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V 280 (386)
T PF01053_consen 233 ----------LLGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRV 280 (386)
T ss_dssp ----------HHT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEE
T ss_pred ----------hcCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeE
Confidence 1122335678887776 67788899999999999999999999998744
No 251
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.05 E-value=3.4e-07 Score=97.32 Aligned_cols=312 Identities=14% Similarity=0.121 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC--
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG-- 333 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG-- 333 (629)
+.+|-++-+.+.++++.- .-..|+++||+|++.|++.||..- ++ +.+|...+.-|-+.+...--.|
T Consensus 92 te~Ei~~Aell~~~~p~~-e~vrfvnSGTEAtmsAiRlARa~T----------gR-~kIikF~G~YHG~~D~~lv~agsg 159 (432)
T COG0001 92 TELEVELAELLIERVPSI-EKVRFVNSGTEATMSAIRLARAYT----------GR-DKIIKFEGCYHGHSDSLLVKAGSG 159 (432)
T ss_pred CHHHHHHHHHHHHhcCcc-cEEEEecchhHHHHHHHHHHHHhh----------CC-CeEEEEcCCCCCCccHHHhhcCcC
Confidence 566777778888887542 468999999999999999999752 22 3345566677765443322221
Q ss_pred -----------CC---CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHH
Q psy1785 334 -----------LG---SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICA 395 (629)
Q Consensus 334 -----------lg---~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~ 395 (629)
+. ...++.+|. -|++.|++++++. |.....|++----...|.|-| |++++++|+
T Consensus 160 ~~t~g~p~s~Gvp~~~a~~ti~~~y-----ND~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~ 231 (432)
T COG0001 160 AATLGSPSSPGVPADVAKHTLVLPY-----NDLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTE 231 (432)
T ss_pred cccCCCCCCCCCChhhhccEEEecC-----CCHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHH
Confidence 11 124566664 4788998888763 334556666666777788877 678999999
Q ss_pred HcCCeEEE--ecCcccccccccccccccccccc-ccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccc
Q psy1785 396 EYDMADSV--TWNPHKLLTAPQQCSVFLTRRNY-VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLF 472 (629)
Q Consensus 396 ~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~-~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~ 472 (629)
++|..++. ...|+-+... -.+.. |++ .|..++ -|.+|.-+.+|++-.|. +..+..-. ...++
T Consensus 232 e~G~lLI~DEViTGFR~~~g--------Gaq~~~gi~--PDlttl--GKiIGGGlP~ga~gGr~-eiM~~~~p--~g~vy 296 (432)
T COG0001 232 EHGALLIFDEVITGFRVALG--------GAQGYYGVE--PDLTTL--GKIIGGGLPIGAFGGRA-EIMEQLAP--LGPVY 296 (432)
T ss_pred HcCcEEEEecchhhcccCCc--------ccccccCcC--cchhhh--hhhhcCCcceeeeccHH-HHHhhhCC--CCCcc
Confidence 99999888 3333222100 00111 332 466554 48888888889887766 34442211 11111
Q ss_pred cCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcCh-hh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE
Q psy1785 473 QKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGT-DG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF 550 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~-~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F 550 (629)
+ .++. .+.+....+-..+++.+-. ++ |+++.+..-.|+.-|.+.+.+. |+.+.. ...-+.+++
T Consensus 297 q----------aGT~---sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v-~~~gsm~~i 361 (432)
T COG0001 297 Q----------AGTL---SGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTV-NRVGSMFGI 361 (432)
T ss_pred c----------cCCC---CCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEE-eeecceEEE
Confidence 1 1111 1122222233344444433 34 5554444444555555555554 665543 233344555
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.+...+...+ ....... ...++...|.++|.. +.+. -+...+.+..+|++|||+.++++++..+.
T Consensus 362 ~F~~~~~~n~~d--a~~sd~~-~~~~~~~~~l~~GV~-l~ps-------~~ea~flS~ahte~di~~~~~a~~~~~~~ 428 (432)
T COG0001 362 FFTEEGVRNYAD--AKRSDVE-RFAKFFHHLLNRGVY-LAPS-------QFEAGFLSTAHTEEDIDRTLEAADEAFKE 428 (432)
T ss_pred EecCCCCCCHHH--HHhhchH-HHHHHHHHHHhCCcc-cCCc-------cccceeeecccCHHHHHHHHHHHHHHHHH
Confidence 554433322110 1111111 123445588899953 3322 23334445889999999999999876553
No 252
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.05 E-value=1.5e-07 Score=102.30 Aligned_cols=299 Identities=13% Similarity=0.081 Sum_probs=171.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.++.+.++++++. ....|+++||+||..|++.||.... ++.| . .+..+|.....-|-+..-+....+..
T Consensus 80 ~~la~~L~~~~~~--~~~~f~~SGseA~e~Alk~ar~~~~---~~~~-~-~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~ 152 (397)
T TIGR03246 80 LRLAKKLVDATFA--DKVFFCNSGAEANEAALKLARRYAL---DKHG-A-DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQ 152 (397)
T ss_pred HHHHHHHHhhCCC--CEEEEeCCcHHHHHHHHHHHHHHHH---hcCC-C-CCCEEEEECCCcCCccHHHHHhcCCccccc
Confidence 4455567777654 4789999999999999999986421 1111 1 13446667777888866555543310
Q ss_pred -----CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccc----ccCHHHHHHHHHHcCCeEEE--e
Q psy1785 336 -----SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGA----FDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 336 -----~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~----idpl~ei~~i~~~~~~~lhV--A 404 (629)
...+..+|. -|+++|++.|.+ ....|+..-..+..|. .+.+++|+++|++||+++++ +
T Consensus 153 ~~~~~~~~~~~~~~-----~d~~~l~~~l~~------~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv 221 (397)
T TIGR03246 153 GFAPLPGGIKHAPY-----NDLAAAKALISD------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEV 221 (397)
T ss_pred CCCCCCCceEEeCC-----CCHHHHHHHhcc------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEech
Confidence 113444543 278899888853 2344555544444553 35699999999999999999 5
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
+-|...... +.....+++ . .|++++ -|.++.-+..|.++.+++ +.. .+... .. .
T Consensus 222 ~tG~Gr~G~------~~a~~~~gv-~-pDi~t~--~K~lggG~pigav~~~~~-i~~-~~~~~----~~----------~ 275 (397)
T TIGR03246 222 QTGVGRTGE------LYAYMHYGV-T-PDILTS--AKALGGGFPIGAMLTTTE-IAA-HLKVG----TH----------G 275 (397)
T ss_pred hhcCCcccc------chhhhhcCC-C-CCEEEe--ehhhhCCcceeEEEEcHH-HHH-hccCC----Cc----------C
Confidence 433211111 000111133 2 688765 688865466788877653 332 22100 00 0
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEEEEEeeCCCCCCCCc
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v~F~~~p~~~~~~~~ 562 (629)
. +. ++.+........++..+.. .++.++..++.++|++.|+++. .+.++.+ ...-..+.+.+.+.
T Consensus 276 ~--t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~------- 342 (397)
T TIGR03246 276 T--TY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA------- 342 (397)
T ss_pred C--CC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc-------
Confidence 0 11 2333334444455555433 3456777788899999888752 1222220 11222223332211
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.......+.+.|.++|.++.. .+ .+++|+++. ...|++|||.+++.|++...+
T Consensus 343 -------~~~~~~~~~~~l~~~Gv~~~~----~g-~~~lR~~p~-~~~t~~~i~~~~~~l~~~l~~ 395 (397)
T TIGR03246 343 -------YQGKAKQFVNAAAEEGVIALI----AG-PNVVRFAPS-LVISDDDIDEGLARFERAIEQ 395 (397)
T ss_pred -------hhhHHHHHHHHHHHCCeEEee----cC-CCEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 001124677889999975432 12 258999985 889999999999999887653
No 253
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.05 E-value=4.7e-07 Score=98.68 Aligned_cols=317 Identities=10% Similarity=0.065 Sum_probs=181.0
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|........+-..+.+++.+..|++ .. +.++|+|++++...++.+.. .|...|++..-++...
T Consensus 67 Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~--------------~~gd~Vlv~~P~y~~~ 132 (403)
T PRK08636 67 YSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAIT--------------NPGDVAIVPDPAYPIH 132 (403)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhC--------------CCCCEEEEcCCCCcch
Confidence 3333444556677777887777764 34 58889998887655554321 1444666777777777
Q ss_pred HHHHHHcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCC-CCcEEEEEeeCCCccccccC---HHHHHHHHHHcCC
Q psy1785 326 KKLAAFEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEG-AVPFMVSATSGTTVLGAFDP---IPAIADICAEYDM 399 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~ 399 (629)
..++...|. +++.||.+ ++..+|++.|.+.+++..+++ ..+.+++.+...+.+|.+-+ +.+|.++|++|++
T Consensus 133 ~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~ 209 (403)
T PRK08636 133 SQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERF 209 (403)
T ss_pred HHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCc
Confidence 788889998 99999885 346899998877776655442 35667777777888898865 4677778999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCC--cceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEV--VADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~--gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
|+.+ +|+....-..+ .. ... .++. ..-..+.++-|.++.| .-+|.++. ++.+....... ..+.
T Consensus 210 ~II~De~Y~~l~~~~~~--~~---~~~--~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li~~~~~~-~~~~--- 277 (403)
T PRK08636 210 YIISDIAYADITFDGYK--TP---SIL--EVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLVGALKKI-KSWL--- 277 (403)
T ss_pred EEEEeccchhhccCCCC--CC---Chh--cCCCccccEEEEEecccccCCccceeeeeeC-CHHHHHHHHHH-HHHh---
Confidence 9999 66643321100 00 001 1111 0223467899999655 44777654 44444332110 0000
Q ss_pred CcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeC
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIP 554 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p 554 (629)
+.+ .+.....+..+ +++. ...-+++..+...+..+.+.+.|++. ++++. .|.-+.+++--.|
T Consensus 278 --------~~~-----~~~~~q~~~~~-~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~p~~g~~~~~~l~ 339 (403)
T PRK08636 278 --------DYG-----MFTPIQVAATI-ALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWELQ--KPRASMFVWAKIP 339 (403)
T ss_pred --------ccc-----CChHHHHHHHH-HHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc--CCCcceEEEEECC
Confidence 000 01111111111 2221 23345555566667778888888886 77654 3544443332223
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+...+.. ..++.+.+. +.|..+........ ..++||+++. .++++++..++.|+++.+
T Consensus 340 ~~~~~~~------------~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~~~rl~~~l~ 399 (403)
T PRK08636 340 EPARHLG------------SLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENENRIRQAARNIKKFLK 399 (403)
T ss_pred CccCCCC------------HHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 2211110 023454544 56765544333321 2369999995 368888888888777654
No 254
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.05 E-value=3e-08 Score=108.49 Aligned_cols=299 Identities=16% Similarity=0.144 Sum_probs=186.4
Q ss_pred HHHHHHHHHHhCCCCCCeEE-eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIF-CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~-~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.++.+.+++++|.+. -+| +.|.|.+|..++.+... |...|++...+|.|+..+.-+.|. .
T Consensus 73 ~eAqe~aA~~fgAd~--tyFvvNGTS~ank~vi~a~~~--------------~GD~VLvdRN~HKSi~~glilaGa---~ 133 (557)
T COG1982 73 KEAQELAARVFGADH--TYFVVNGTSTANKAVINAVLT--------------PGDKVLVDRNCHKSIHHGLILAGA---T 133 (557)
T ss_pred HHHHHHHHHHhCCCc--eEEEECCccHHHHHHHHhhcC--------------CCCEEEecCCccHHHHHHHHHcCC---c
Confidence 666778999999864 345 55555666655554332 566789999999999999888887 5
Q ss_pred EEEEec--CC----CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccc
Q psy1785 339 VYLIKT--DA----RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKL 410 (629)
Q Consensus 339 v~~V~~--d~----~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l 410 (629)
-+++.. |+ -|.++.+.+++++.+..... .+++. ..+|..|.+-++++|.+.++.+++|+.+ +++.+.-
T Consensus 134 Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vi-tnpTYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~ 209 (557)
T COG1982 134 PVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVI-TNPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFD 209 (557)
T ss_pred eEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEE-ecCccceEeecHHHHHHHHhhcCceEEhhhcCccccc
Confidence 555543 33 26899999999887643321 23444 4678889999999999999999999999 6777665
Q ss_pred ccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEecc-chhhhhhcCCCCccccCCcCCCcccCCCCccC
Q psy1785 411 LTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQ-SVLTECHSASASYLFQKDKFYDTKYDSGDKHI 489 (629)
Q Consensus 411 ~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 489 (629)
+++. ......+.++|.++-+.||.+++-.++|.+.+++. ..-...++ ..|...
T Consensus 210 ~~~~--------l~~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~n--ea~~~h---------------- 263 (557)
T COG1982 210 FSPM--------LPESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFN--EALMMH---------------- 263 (557)
T ss_pred cccc--------CcchhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHH--HHHHHH----------------
Confidence 5441 11112445799999999999999999999999973 11111111 011111
Q ss_pred CCCCCc----chHHH-HHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCc----e--------EEEEEe
Q psy1785 490 QCGRKP----DVLKF-WFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPEC----T--------NISFWY 552 (629)
Q Consensus 490 ~~sr~~----~al~~-w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~----~--------~v~F~~ 552 (629)
+.+.++ .++-+ -+.+...|+.-+++-+++.++.++++++.+.++++|+++. ++.. . .=.+.+
T Consensus 264 ~STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~-~~~~~~~~~whgf~~~~~~~~~l 342 (557)
T COG1982 264 QSTSPSYPLMASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQ-PEKLDPPTGWHGFEDYADDQYFL 342 (557)
T ss_pred ccCCchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecc-ccccCCcccccccccccccceec
Confidence 111121 12222 1223333444455558999999999999999998898886 3221 0 001111
Q ss_pred eCCC------CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 553 IPPS------LRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 553 ~p~~------~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
.|-. -.|.. ...+.+.|.++|.+..- .......|-++.. ...+..+|+.|++..++
T Consensus 343 DP~Klti~tp~~Gip------------g~~v~~~L~e~gii~e~---~~d~~~lll~~~~-~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 343 DPTKLTITTPEFGIP------------GAIVAKYLREHGIIPEE---TGDYSNLLLFSPG-IGKWQTLVDRLLEFKRR 404 (557)
T ss_pred cccEEEEecCCCCCc------------HHHHHHHHHHcCCeeee---cCCceeeEEeeec-cchHHHHHHHHHHHHHh
Confidence 2211 01111 23567778888865322 2222223444443 36678888888887774
No 255
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.04 E-value=3.1e-07 Score=99.39 Aligned_cols=299 Identities=10% Similarity=0.059 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHc
Q psy1785 256 SLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFE 332 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~l 332 (629)
..+-+.+.+++.+..|++ .. ..++|+|++++...++.... .|...|++..-++..+...++..
T Consensus 72 ~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~--------------~~gd~Vl~~~P~y~~~~~~~~~~ 137 (385)
T PRK09276 72 LEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFV--------------NPGDVVLVPDPGYPVYKIGTIFA 137 (385)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC--------------CCCCEEEEcCCCCcChHHHHHHc
Confidence 344455566666655653 33 46777888888765544321 13344666666666777788889
Q ss_pred CCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ec
Q psy1785 333 GLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 333 Glg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~ 405 (629)
|. +++.+|.+++ ..+|++++++.+.. .+.+|..+...+.+|.+-+ +++|.++|+++++++++ +|
T Consensus 138 g~---~~~~v~~~~~~g~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y 208 (385)
T PRK09276 138 GG---EPYFMPLKEENGFLPDLDAIPEDVAK------KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAY 208 (385)
T ss_pred CC---EEEEEecCCCCCCcCCHHHHHHhccc------cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecch
Confidence 98 9999998743 45899988887643 2446666677889999877 57888889999999999 66
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
.....-.. ....+.... +... ...+..++-|.++.| .=+|.++. ++.+........ .++.
T Consensus 209 ~~~~~~~~--~~~~~~~~~--~~~~-~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~~~~~~~-~~~~------------ 269 (385)
T PRK09276 209 SEIAYDGY--KPPSFLEVP--GAKD-VGIEFHSLSKTYNMTGWRIGFAVG-NADLIAGLGKVK-SNVD------------ 269 (385)
T ss_pred hheecCCC--CCCChhccC--CCcC-CEEEEecchhhcCCcchhheeeeC-CHHHHHHHHHHH-hhcc------------
Confidence 54322110 000000110 1111 345677888998755 22677764 444443321110 0000
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEE-EEEeeCCCCCCCCch
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNI-SFWYIPPSLRGKEDQ 563 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v-~F~~~p~~~~~~~~~ 563 (629)
.+........+..++.. ...-+++..++..+..+++.+.|++. ++++. .|..+.+ .+++ |+...
T Consensus 270 -----~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~--~~~~~~~~~v~~-~~~~~----- 334 (385)
T PRK09276 270 -----SGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLEVE--PPKATFYVWAPV-PKGYT----- 334 (385)
T ss_pred -----CCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc--CCCcceEEEEEC-CCCCC-----
Confidence 01111111111122221 23345566666677788899999887 78754 3544432 2222 22211
Q ss_pred hhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 564 ADFNELLHKVAPKIKERMM-KSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
..++.+.|. +.|..+........ ..+++|++++ . +++++...++.|.+
T Consensus 335 ----------~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~-~--~~~~l~~~l~~l~~ 384 (385)
T PRK09276 335 ----------SAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT-V--PDERIEEAVERIKK 384 (385)
T ss_pred ----------HHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC-C--CHHHHHHHHHHHhh
Confidence 124556665 46765433222221 1358999996 2 56666666655543
No 256
>PRK03321 putative aminotransferase; Provisional
Probab=99.04 E-value=4.8e-08 Score=104.35 Aligned_cols=285 Identities=8% Similarity=0.014 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++++|.+..+.++++|+++++..++... . .|...|++...+......+++..|. ++
T Consensus 60 ~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~-~-------------~~gd~Vli~~p~y~~~~~~~~~~g~---~~ 122 (352)
T PRK03321 60 VELRAALAEHLGVPPEHVAVGCGSVALCQQLVQAT-A-------------GPGDEVIFAWRSFEAYPILVQVAGA---TP 122 (352)
T ss_pred HHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHh-c-------------CCCCEEEeCCCCHHHHHHHHHHcCC---EE
Confidence 55666788888887678888888877655443321 1 1333455544443344556778888 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH--cCCeEEE--ecCccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE--YDMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~--~~~~lhV--A~gg~~l~~~~~ 415 (629)
+.||.++++.+|++.+++.+.. .+.+|+.+...+.+|.+-|.+++.++|+. +++++++ +|.....-....
T Consensus 123 ~~v~~~~~~~~~~~~l~~~~~~------~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~ 196 (352)
T PRK03321 123 VQVPLTPDHTHDLDAMAAAITD------RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVP 196 (352)
T ss_pred EEccCCCCCCCCHHHHHHhhcc------CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCC
Confidence 9999987789999999888753 23456667788999999999999999997 5888888 665433211100
Q ss_pred cccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
.+-..+. . .+. -.++.++-|.++.| +-+|.++.. +.+.+...... . . + .
T Consensus 197 ~~~~~~~--~--~~~--vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~~~-----~-~-----------~------~ 246 (352)
T PRK03321 197 DGLELVR--D--HPN--VVVLRTFSKAYGLAGLRVGYAVGH-PEVIAALRKVA-----V-P-----------F------S 246 (352)
T ss_pred cHHHHHh--h--CCC--EEEEecchHHhhhHHHhhhhhcCC-HHHHHHHHHhc-----C-C-----------C------C
Confidence 0000000 0 011 24566889998754 336776664 34444321110 0 0 0 1
Q ss_pred cchHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhH
Q psy1785 495 PDVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKV 573 (629)
Q Consensus 495 ~~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~ 573 (629)
...+...+++..+ ..+.+.+.+++..+..+++.+.|++. |+.+ . ++..+.+.++. +..
T Consensus 247 ~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~-~-~~~g~~i~i~l-~~~----------------- 305 (352)
T PRK03321 247 VNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTV-P-PSQANFVWLPL-GER----------------- 305 (352)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCcc-C-CCCCCEEEEeC-CCC-----------------
Confidence 1222222222222 23445556666666677888888886 7764 2 33333222222 100
Q ss_pred HHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 574 APKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 574 ~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..++.+.|.+.|..... ... ++||++++ +.+++++++++|+++..
T Consensus 306 ~~~~~~~l~~~gI~v~~---~~~--~~iRi~~~----~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 306 TADFAAAAAEAGVVVRP---FAG--EGVRVTIG----APEENDAFLRAARAWRA 350 (352)
T ss_pred HHHHHHHHHHCCEEEEc---cCC--CcEEEeeC----CHHHHHHHHHHHHHHhc
Confidence 12567778888865432 322 46999985 88999999999998754
No 257
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.04 E-value=1.7e-07 Score=101.03 Aligned_cols=296 Identities=14% Similarity=0.115 Sum_probs=162.6
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
..++.+++++++|.+ ..+++.||++++..++.+++.... ..|. ....+++....-|.+...+....+.....
T Consensus 71 ~~~l~~~la~~~g~~--~~~~~~sg~~a~~~a~~~~~~~~~----~~~~--~~~~vi~~~~~yh~~~~~~~~~~~~~~~~ 142 (379)
T TIGR00707 71 QEELAEKLVEHSGAD--RVFFCNSGAEANEAALKLARKYTG----DKGK--EKKKIIAFENSFHGRTMGALSATGQPKYQ 142 (379)
T ss_pred HHHHHHHHHhhCCCC--EEEEeCCcHHHHHHHHHHHHHHhh----ccCC--CCCeEEEECCCcCCccHHHHHhcCChhhh
Confidence 455666788888875 789999999999999987764210 0010 01345556666665544333222210000
Q ss_pred EEEEecCCCCC----CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 339 VYLIKTDARGR----MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF----DPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 339 v~~V~~d~~g~----~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i----dpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
....+...+.. .|+++|++.+.+ .+.+|+.....+..|.+ +++++|.++|+++++++++ ++.+.
T Consensus 143 ~~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~ 216 (379)
T TIGR00707 143 KGFEPLVPGFSYAPYNDIESLKKAIDD------ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGI 216 (379)
T ss_pred ccCCCCCCCceeeCCCCHHHHHHHhhh------CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 01112222211 278999888864 23345555555545543 3589999999999999999 76542
Q ss_pred ccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCcc
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKH 488 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 488 (629)
.....+ . .....++ . .|.++ ..|.++..+..|.++..+ +..... .. .... . +
T Consensus 217 ~~~g~~--~----~~~~~~~-~-~d~~t--~sK~~~~G~riG~~~~~~-~~~~~~-~~----~~~~----------~--~ 268 (379)
T TIGR00707 217 GRTGKF--F----AYEHYGI-E-PDIIT--LAKGLGGGVPIGATLAKE-EVAEAF-TP----GDHG----------S--T 268 (379)
T ss_pred Cccchh--h----hHHhcCC-C-CCEEE--EcccccCCcccEEEEEcH-HHHhhh-cC----CCCC----------C--C
Confidence 211110 0 0000011 1 46655 479999667788887754 343321 10 0000 0 0
Q ss_pred CCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc--CCCceEEEEEeeCCCCCCCCchhhH
Q psy1785 489 IQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD--EPECTNISFWYIPPSLRGKEDQADF 566 (629)
Q Consensus 489 ~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~--~p~~~~v~F~~~p~~~~~~~~~~~~ 566 (629)
-++.......++.+|+.+... +..++..++.++++++|++. +.+.... .+..+.+.+...++
T Consensus 269 -~~~~~~~~~aa~aaL~~~~~~---~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~----------- 332 (379)
T TIGR00707 269 -FGGNPLACAAALAVLEVIEKE---RLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP----------- 332 (379)
T ss_pred -CCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc-----------
Confidence 122233444555556654332 34556667788888887764 3222110 12223344443211
Q ss_pred HHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 567 NELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 567 ~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..++.++|.++|..+.. . + .+++|++++ ...|+++|+.+++.|+++
T Consensus 333 -------~~~~~~~l~~~Gv~v~~---~-~-~~~lRi~~~-~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 333 -------CKDIVKKALEKGLLVNC---A-G-PKVLRFLPP-LIITKEEIDEAVSALEEA 378 (379)
T ss_pred -------HHHHHHHHHHCCcEEee---C-C-CCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 13567788889965432 1 2 258999984 778999999999999875
No 258
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.03 E-value=1.3e-06 Score=95.48 Aligned_cols=316 Identities=11% Similarity=0.078 Sum_probs=174.9
Q ss_pred cccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|........+-+.+.+++.+..|+ +..+.++|+|++++...++.+... |...|++..-+...+.
T Consensus 70 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~--------------~gd~v~v~~P~y~~~~ 135 (409)
T PLN00143 70 YAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHAAEIIIKVLAR--------------PEANILLPRPGFPDVE 135 (409)
T ss_pred CCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHHHHHHHHHHcC--------------CCCEEEEcCCCCcCHH
Confidence 433334444445555555554454 446788999999887666553321 3334566666666777
Q ss_pred HHHHHcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~l 401 (629)
..+...|. +++.++.+ ++..+|+++|++++.. .+..++.+...+.+|.+-+ +.+|.++|+++++++
T Consensus 136 ~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~i 206 (409)
T PLN00143 136 TYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADE------NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILV 206 (409)
T ss_pred HHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhccc------CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeE
Confidence 88889998 89999985 2357999999887643 2445666678899999977 667778899999999
Q ss_pred EE--ecCccccccccccccccccccccccCC-cceEEEeCCCCCCCCC-CccEEEEEeccc-hhhhhhcCCCCccccCCc
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEV-VADSVTWNPHKLLTAP-QQCSVFLTRHQS-VLTECHSASASYLFQKDK 476 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~-gaDsv~~~~HK~l~~P-~~~g~ll~r~~~-~l~~~~~~~~~yl~~~~~ 476 (629)
++ +|.....-..+. .+ ... +.. .-=.++.++-|.++.| +-+|.++..++. .++..... ..+....
T Consensus 207 i~De~Y~~l~~~~~~~-~~----~~~--~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~--~~~~~~~- 276 (409)
T PLN00143 207 IADEVYGHIVFGSKPF-VP----MGL--FASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIA--DSIKKAL- 276 (409)
T ss_pred EEEccccccccCCCCC-cc----hhh--hcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHH--HHHHHHH-
Confidence 99 666543211100 00 000 111 0125678889995555 558888775432 21110000 0000000
Q ss_pred CCCcccCCCCccCCCCCCcchHHHHHHHHhc---ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee
Q psy1785 477 FYDTKYDSGDKHIQCGRKPDVLKFWFMWKAK---GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~---G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~ 553 (629)
+. ..++ ..+...++..++ +..-+++..++..+..+++.+.|.++++..... .|+-+.+.|--.
T Consensus 277 ------~~----~~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~-~p~gg~f~w~~l 342 (409)
T PLN00143 277 ------NP----APFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQ-KAEGAFFALVKL 342 (409)
T ss_pred ------hc----cCCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC-CCCeeEEEEEec
Confidence 00 0011 111112222222 234566777777777788888888875443233 455554433222
Q ss_pred CCC-CCCCCchhhHHHHHhhHHHHH-HHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 554 PPS-LRGKEDQADFNELLHKVAPKI-KERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 554 p~~-~~~~~~~~~~~~~l~~~~~~i-~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
|.. ..+..+. .++ .+.+.+.|.++..+... +..+++|++++ +++++++..++.|+++.
T Consensus 343 ~~~~~~~~~~~-----------~~~~~~ll~~~gV~v~pg~~f-~~~~~iRi~~~---~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 343 NLLLLEDIEDD-----------MEFCLKLAKEESLIILPGVTV-GLKNWLRITFA---VEQSSLEDGLGRLKSFC 402 (409)
T ss_pred chhhcCCCCCH-----------HHHHHHHHHhCCEEEeCcccc-CCCCeEEEEEc---CCHHHHHHHHHHHHHHH
Confidence 210 0010000 123 34456778655443333 33569999996 34788888777777654
No 259
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.03 E-value=1.8e-07 Score=101.54 Aligned_cols=300 Identities=13% Similarity=0.063 Sum_probs=173.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCC
Q psy1785 257 LMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGS 336 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~ 336 (629)
..+.++.+++++..++ ....|+++||+||..|+..||.... ++.+ .+..+|......|-+..-+....|...
T Consensus 78 ~~~~~la~~l~~~~~~--~~v~f~~SGseA~e~Aik~ar~~~~-----~~~~-~r~~ii~~~~~yHG~t~~~~~~s~~~~ 149 (395)
T PRK03715 78 EPMAKLAGLLTQHSCF--DKVFFANSGAEANEGAIKLARKWGR-----KHKN-GAYEIITFDHSFHGRTLATMSASGKPG 149 (395)
T ss_pred HHHHHHHHHHhhccCC--CEEEEeCCcHHHHHHHHHHHHHHhh-----ccCC-CCcEEEEECCCcCCChHHHHhhcCCcc
Confidence 4455666666665443 3689999999999999999986411 1101 123466677788988877777665311
Q ss_pred CCEEEEecCCC----CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--ecC
Q psy1785 337 DNVYLIKTDAR----GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--TWN 406 (629)
Q Consensus 337 ~~v~~V~~d~~----g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A~g 406 (629)
......|.... ...|+++|++.+.+ ....|+..-.....|.+-| +++|+++|++||+++++ ++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~t 223 (395)
T PRK03715 150 WDTIFAPQVPGFPKAELNDIASVEKLITD------KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQT 223 (395)
T ss_pred cccCCCCCCCCceeeCCchHHHHHHHcCC------CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 01111111111 12477888877742 2445666666666777777 99999999999999999 555
Q ss_pred ccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCC
Q psy1785 407 PHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 407 g~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 486 (629)
|.-.... .+-...+++ . .|.+++. |.++..+..|.++++++ .. .+. ..+. .+
T Consensus 224 G~GRtG~------~~a~~~~gv-~-PDi~t~g--K~lg~G~p~~av~~~~~-i~--~~~--~~~~------------~~- 275 (395)
T PRK03715 224 GCGRTGT------LFAYELSGI-E-PDIMTLG--KGIGGGVPLAALLAKAE-VA--VFE--AGDQ------------GG- 275 (395)
T ss_pred CCCCCcc------hhhHhhcCC-C-Cceeeeh--hhhhCCcceEEEEEccc-cc--ccc--CCCc------------CC-
Confidence 4211111 000111233 2 6888875 88887666888888764 22 110 1111 01
Q ss_pred ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC---CCcEEEccCCCceEEEEEeeCCCCCCCCch
Q psy1785 487 KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR---PGFKLVLDEPECTNISFWYIPPSLRGKEDQ 563 (629)
Q Consensus 487 ~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~---~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~ 563 (629)
|. .+.+..+.....++..+..+ +++++..++.++|+++|+++ .++.-+. -...++.+.+..+
T Consensus 276 -T~-~g~pl~~aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr--G~Glm~~i~l~~~-------- 340 (395)
T PRK03715 276 -TY-NGNPLMTAVGVAVISQLLAP---GFLEGVRARGEYLKEKLLELSEERGLEGER--GEGLLRALLLGKD-------- 340 (395)
T ss_pred -CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHhhcCCcCeEE--cceeEEEEEecCc--------
Confidence 11 23344455556666666433 45677777888888888753 1332121 1223333433210
Q ss_pred hhHHHHHhhHHHHHHHH---HHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 564 ADFNELLHKVAPKIKER---MMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~---l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
....+.+. +.++|.++ .. .. .+.||+++. ..+|++|||.+++.|++..++
T Consensus 341 ---------~~~~~~~~~~~~~~~Gi~~-~~--~~--~~~lR~~p~-l~~t~~ei~~~~~~l~~~l~~ 393 (395)
T PRK03715 341 ---------IGPQIVEKARDMQPDGLLL-NA--PR--PNLLRFMPA-LNVTTEEIDQMIAMLRSVLDK 393 (395)
T ss_pred ---------hHHHHHHHHHhccCCCEEE-ee--cC--CCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 00123333 33448543 21 11 258999995 999999999999999987664
No 260
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.02 E-value=2.8e-07 Score=99.42 Aligned_cols=290 Identities=13% Similarity=0.146 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG 335 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg 335 (629)
..++.++.+++++..+. ....++++|+++|..|+..++... | ...++......|-+..-+....+..
T Consensus 70 ~~~~~~la~~l~~~~~~--~~~~~~~sG~~a~~~A~~~a~~~~-------g----~~~vi~~~~~~Hg~~~~~~~~~~~~ 136 (377)
T PRK02936 70 NSLQEEVASLLAENSAG--DLVFFCNSGAEANEAALKLARKHT-------G----KSKIVTFEQSFHGRTFGTMSATGQE 136 (377)
T ss_pred CHHHHHHHHHHHhcCCC--CEEEEeCCcHHHHHHHHHHHHHhc-------C----CCeEEEECCCcCCCcHHhhhccCCc
Confidence 34556666667766553 368999999999999999887531 2 2345666677887766555543321
Q ss_pred C---------CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHcCCeEE
Q psy1785 336 S---------DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF----DPIPAIADICAEYDMADS 402 (629)
Q Consensus 336 ~---------~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i----dpl~ei~~i~~~~~~~lh 402 (629)
. .++..+|.+ |+++|++.+.+ ....|+.....+..|.+ +.+++|+++|++|+++++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~-----d~~~l~~~~~~------~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI 205 (377)
T PRK02936 137 KIKEGFGPLLPGFTHVPFN-----DIKALKEVMNE------EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLI 205 (377)
T ss_pred cccccCCCCCCCceEeCCC-----CHHHHHHhccC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 0 122333322 78888887753 23345554444444444 349999999999999999
Q ss_pred E--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCc
Q psy1785 403 V--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 403 V--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~ 480 (629)
+ ++.+...-..+. .....++ . .|.++ ..|.++.-+..|.++.++ .+... +... . .
T Consensus 206 ~DEv~~g~g~~g~~~------~~~~~~~-~-~di~t--~sK~l~~G~~ig~v~~~~-~~~~~-~~~~---~-~------- 262 (377)
T PRK02936 206 IDEVQTGIGRTGTLF------AYEQFGL-D-PDIVT--VAKGLGNGIPVGAMIGKK-ELGTA-FGPG---S-H------- 262 (377)
T ss_pred EeccccCCCcCchhh------HHHhhCC-C-CcEEE--EcccccCCCccEEEEEcH-HHHhh-ccCC---C-C-------
Confidence 9 665422111100 0011122 2 46655 589998544577776654 33322 1100 0 0
Q ss_pred ccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC-CCcEEEcc-CCCceEEEEEeeCCCCC
Q psy1785 481 KYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR-PGFKLVLD-EPECTNISFWYIPPSLR 558 (629)
Q Consensus 481 ~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~-~g~~l~~~-~p~~~~v~F~~~p~~~~ 558 (629)
. .+ .++.+.....+-.+++.+.. ++++++..++.+++++.|++. +++..+.+ .+.-..+.+.+.+
T Consensus 263 ---~--~t-~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~---- 329 (377)
T PRK02936 263 ---G--ST-FGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE---- 329 (377)
T ss_pred ---C--CC-CCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecc----
Confidence 0 01 12222233333334443311 234455666777777776652 22222210 1222233333211
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
+ ...+.+.|.++|.++.. .+ .+++|+++. ...++++|+++++.|+++
T Consensus 330 ------~--------~~~~~~~l~~~gv~v~~----~g-~~~lRi~p~-~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 330 ------E--------VAPVIEQLREEGLLVLS----AG-PNVIRLLPP-LVVTKEELDQAVYLLKKV 376 (377)
T ss_pred ------h--------HHHHHHHHHHCCeEEec----CC-CCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence 0 13567788889965432 12 258999984 788999999999999765
No 261
>PLN02624 ornithine-delta-aminotransferase
Probab=99.02 E-value=4.6e-07 Score=100.71 Aligned_cols=303 Identities=12% Similarity=0.069 Sum_probs=169.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+.+++++|++ ...|+++|+++|..|+..||.... .++|.+.....++...+.-|-...-+..+.+-
T Consensus 120 ~~la~~L~~~~~~~--~~~f~~SGseA~e~AlklAr~~~~---~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~ 194 (474)
T PLN02624 120 PEFAEYLTSMFGYD--MVLPMNTGAEGVETAIKLARKWGY---EKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATR 194 (474)
T ss_pred HHHHHHHHhhcCCC--eEEEeCChHHHHHHHHHHHHHHHH---hhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccc
Confidence 44555677777653 689999999999999999987411 12232111234555666666543333332210
Q ss_pred ----CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--e
Q psy1785 335 ----GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 335 ----g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A 404 (629)
....+..+|.+ |++.|++.++. .+....+|+..-..+..|.+-| |++|+++|++||+++++ +
T Consensus 195 ~~~~~~~~~~~~~~~-----d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv 266 (474)
T PLN02624 195 GFGPLLPGHLKVDFG-----DLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEI 266 (474)
T ss_pred cCCCCCCCceEeCCC-----CHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 01124445432 67888888853 2334556666666677788877 99999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
+.|.......+ .....++ . .|.++++ |.++.. ..+|.++.++ ++.... . + . ..
T Consensus 267 ~tG~GrtG~~~------a~~~~~i-~-pDiv~ls--K~lggG~~pigav~~~~-~i~~~~-~--~-~-~~---------- 320 (474)
T PLN02624 267 QTGLARTGKML------ACDWEEV-R-PDVVILG--KALGGGVIPVSAVLADK-DVMLCI-K--P-G-EH---------- 320 (474)
T ss_pred ccCcCcCcchh------hHHhcCC-C-CCEEEec--ccccCCCCcceeeeecH-HHHhHh-c--c-C-Cc----------
Confidence 65422111100 0011122 3 7888875 888876 4678887755 333221 1 0 0 00
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CC-cEEEccCCCceEEEEEeeCCCCC
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PG-FKLVLDEPECTNISFWYIPPSLR 558 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g-~~l~~~~p~~~~v~F~~~p~~~~ 558 (629)
. .+ .++.+.....+-.+++.+..+++ .++..++.++|++.|.++ +. +.-+. +.-..+.+.+..+..
T Consensus 321 ~--~T-~~g~pl~~aaa~aaLe~l~~~~l---~~~~~~~~~~l~~~L~~l~~~~~~~i~~vr--g~G~~~~i~l~~~~~- 391 (474)
T PLN02624 321 G--ST-FGGNPLASAVAMAALQVVQDEKL---AERSAKLGQELRDQLQKIQKQFPKLIKEVR--GRGLLNAVVLNSPKL- 391 (474)
T ss_pred C--CC-CCCCHHHHHHHHHHHHHHHhchH---HHHHHHHHHHHHHHHHHHHHhCCCceEEEE--eeEEEEEEEecCCCc-
Confidence 0 01 12333333334444554434333 345556667777766653 21 21121 222233333322110
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+ . ....++.+.|.++|.++ ... + .++||+++. ..+|++||+.+++.|+++.+
T Consensus 392 ~----~-------~~a~~~~~~L~e~GV~v-~p~---~-~~~lR~~p~-l~~t~e~id~~l~~L~~~l~ 443 (474)
T PLN02624 392 G----P-------VSAYDVCLKLKERGLLA-KPT---H-DTIIRLAPP-LSISEDELQECSKALSDVLE 443 (474)
T ss_pred C----h-------HHHHHHHHHHHhCCeEE-ecC---C-CCEEEEECC-ccCCHHHHHHHHHHHHHHHH
Confidence 0 0 11235677888899643 321 2 368999995 88999999999999987643
No 262
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.02 E-value=6.5e-07 Score=96.90 Aligned_cols=307 Identities=12% Similarity=0.077 Sum_probs=175.4
Q ss_pred cccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|........+.+.+.+++.+-.|+ +..+.++|+|++++...++.+... |...|++..-++....
T Consensus 62 Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~--------------~gd~vlv~~p~y~~~~ 127 (384)
T PRK06348 62 YTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILD--------------PGDEVIIHEPYFTPYK 127 (384)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcC--------------CCCEEEEeCCCCcchH
Confidence 433333445666666777665555 446889999999987666554321 3345667777777888
Q ss_pred HHHHHcCCCCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeE
Q psy1785 327 KLAAFEGLGSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMAD 401 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~l 401 (629)
.++..+|. .++.+|.++ +..+|+++|++.+.. .+.+|..+...+.+|.+-+ +++|.++|+++++++
T Consensus 128 ~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~------~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~i 198 (384)
T PRK06348 128 DQIEMVGG---KPIILETYEEDGFQINVKKLEALITS------KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFI 198 (384)
T ss_pred HHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCc------CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEE
Confidence 88999987 888888743 346999999988753 2334555567788888755 777888899999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
++ +|.....-.. +..+.... +... -..+..++-|.++.| +-+|.+...+ .+........ .+.
T Consensus 199 i~De~y~~~~~~~~---~~~~~~~~--~~~~-~vi~~~SfSK~~~l~GlRiG~~v~~~-~~~~~~~~~~-~~~------- 263 (384)
T PRK06348 199 ISDEVYDGFSFYED---FVPMATLA--GMPE-RTITFGSFSKDFAMTGWRIGYVIAPD-YIIETAKIIN-EGI------- 263 (384)
T ss_pred EEecccccceeCCC---ccchhhcC--CCcC-cEEEEecchhccCCccccceeeecCH-HHHHHHHHHH-Hhc-------
Confidence 99 7765432111 00000111 1111 346677889999844 4577776643 3333211100 000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEee-C-CC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYI-P-PS 556 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~-p-~~ 556 (629)
. -+........+...+. ...+-+++..+...+..+++.+.|++++++++. +|..+.+ +|.. | .+
T Consensus 264 ---------~-~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~--~p~gg~~-~~~~~~~~~ 329 (384)
T PRK06348 264 ---------C-FSAPTISQRAAIYALK-HRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH--PPKGSIY-AFINIKKTG 329 (384)
T ss_pred ---------c-CCCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec--cCCeeEE-EEEecccCC
Confidence 0 0111111111111122 112224445555566678888999888777654 4555443 3332 2 11
Q ss_pred CCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 557 LRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 557 ~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.. ..++.+.+. +.|..+........ ..+++|++++ .++++++..++.|+++
T Consensus 330 ~~---------------~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 330 LS---------------SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT---VGIEVLEEAFNRIEKM 382 (384)
T ss_pred CC---------------HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec---CCHHHHHHHHHHHHhh
Confidence 11 024556655 45765443222211 2368999984 3678888888777654
No 263
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.02 E-value=5.5e-07 Score=98.82 Aligned_cols=317 Identities=10% Similarity=0.032 Sum_probs=170.7
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC---
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG--- 335 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg--- 335 (629)
..++.+.+++++.-......|+++||+|+..|++.||..... .|.++. .-+|...+.-|-...-+..+.+-+
T Consensus 87 ~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~----~~~~~r-~~ii~~~~~yHG~t~~~ls~~~~~~~~ 161 (423)
T PRK05964 87 AERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRN----RGEPGR-SRFLSLRGGYHGDTIGTMSVGDRGGMH 161 (423)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHh----cCCCCC-cEEEEEcCCcCCccHHHHhcCCCcccc
Confidence 345566677776322246899999999999999999975211 122112 335566666776544333322210
Q ss_pred ------CCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEee-CCCccccc----cCHHHHHHHHHHcCCeEE
Q psy1785 336 ------SDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATS-GTTVLGAF----DPIPAIADICAEYDMADS 402 (629)
Q Consensus 336 ------~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~-Gtt~~G~i----dpl~ei~~i~~~~~~~lh 402 (629)
...+..++...+ ...+++.|++.|.+ .+...-.|+..- -....|.. +.+++|+++|++||+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~---~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI 238 (423)
T PRK05964 162 ALYTPLLFEQVTAPFPPDGYEQATLDALEALLEK---HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLI 238 (423)
T ss_pred ccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHh---CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 012444544321 11226677776653 122222333322 12223433 449999999999999998
Q ss_pred E--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 403 V--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 403 V--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
+ .+.|...... +.-....++ . .|.++++ |+++.. +..|.++.++ +..... .... ...
T Consensus 239 ~DEv~tg~gr~G~------~~a~~~~~v-~-pDi~~~~--K~l~gG~~p~~av~~~~-~i~~~~-~~~~-----~~~--- 298 (423)
T PRK05964 239 FDEIATGFGRTGT------LFACEQAGV-S-PDIMCLS--KGLTGGYLPLAATLCTA-EIFEAF-YSDD-----RAK--- 298 (423)
T ss_pred EechhhCCCcCcc------hhHHHhcCC-C-CCeeeee--hhhhcCcccceEEEEcH-HHHHhh-hcCC-----ccc---
Confidence 8 4443221111 000011122 2 6887775 999777 5688877765 333321 1000 000
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCCC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSLR 558 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~~ 558 (629)
.....+ |+ .+.+.....+-.+++.+..++ +.++..++.++|++.|++..++..+.+ ...-..+.+.+..+.
T Consensus 299 ~~~~~~--T~-~~np~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~-- 370 (423)
T PRK05964 299 AFMHSP--SY-TANPLACAAANASLDLFEDEP---VLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPV-- 370 (423)
T ss_pred ccccCC--CC-CcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCc--
Confidence 000001 10 122333333444455443333 556777788889888877643332221 122233455543211
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
. .+....+.+.|.++|.++ .. . + +.+|+++. ..+|++|||.+++.++++.++|
T Consensus 371 ------~-----~~~~~~l~~~l~~~Gv~v-~~--~-~--~~lR~~p~-l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 371 ------L-----ERDGPALRAFALERGVLL-RP--L-G--NTIYLMPP-YIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred ------c-----hhHHHHHHHHHHHCCeEE-Ee--c-C--CEEEEeCC-cccCHHHHHHHHHHHHHHHhhC
Confidence 0 012346788888999653 32 1 2 47999985 8999999999999999988765
No 264
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.01 E-value=1.7e-07 Score=100.92 Aligned_cols=290 Identities=12% Similarity=0.065 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC
Q psy1785 256 SLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG 333 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG 333 (629)
..+.+.+.+++.+..|+ +..+.++|+|++++...++.+... |...|++..-+......++...|
T Consensus 68 ~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~--------------~gd~v~v~~P~y~~~~~~~~~~g 133 (368)
T PRK03317 68 VALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGG--------------PGRTALGFVPSYSMHPIIARGTH 133 (368)
T ss_pred HHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcC--------------CCCEEEEeCCChHHHHHHHHhcC
Confidence 33444555555555454 346788899988876655554321 33345555555556667777778
Q ss_pred CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccc
Q psy1785 334 LGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLL 411 (629)
Q Consensus 334 lg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~ 411 (629)
. +++.++.++++.+|+++|++++.+. .+.+|+.+...+.+|.+-+.+++.++++.+++++++ +|+....-
T Consensus 134 ~---~~~~~~~~~~~~~d~~~l~~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~ 205 (368)
T PRK03317 134 T---EWVEGPRAADFTLDVDAAVAAIAEH-----RPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRS 205 (368)
T ss_pred C---eeEEcccCCCCCCCHHHHHHHHhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhccc
Confidence 7 7888887777889999999888641 122455566788899999999999999999988888 77653211
Q ss_pred cccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCC
Q psy1785 412 TAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQ 490 (629)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 490 (629)
..+ + .+..- . ...--.++.++.|.++.| +-+|.++. ++++..........|
T Consensus 206 ~~~---~-~~~~~--~-~~~~~i~~~SfSK~~g~~GlRiG~~~~-~~~~~~~l~~~~~~~-------------------- 257 (368)
T PRK03317 206 GTP---S-ALTLL--P-EYPRLVVSRTMSKAFAFAGGRLGYLAA-APAVVDALRLVRLPY-------------------- 257 (368)
T ss_pred CCc---C-HHHHH--H-hCCCEEEEEechhhhccchhhhhhhhC-CHHHHHHHHhcCCCC--------------------
Confidence 110 0 00100 0 011124566999999754 33567665 334443321111000
Q ss_pred CCCCcchHHHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHH
Q psy1785 491 CGRKPDVLKFWFMWKAKG-TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNEL 569 (629)
Q Consensus 491 ~sr~~~al~~w~~l~~~G-~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~ 569 (629)
+ ...+...++...+. .+.+.+.+++..+..+++.+.|++. |+++. +|..+.+.| .....
T Consensus 258 ~---~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~-~~~~~------------- 317 (368)
T PRK03317 258 H---LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA--PSDANFVLF-GRFAD------------- 317 (368)
T ss_pred C---CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC--CCCCcEEEE-eccCC-------------
Confidence 0 11122222222221 2345555666677778888898886 88754 355444333 11100
Q ss_pred HhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 570 LHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 570 l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
...+.+.|.++|..+.. . +..+++|++++ +.++++.++++|+++..
T Consensus 318 ----~~~~~~~l~~~Gv~v~~---~-~~~~~iRi~~~----~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 318 ----RHAVWQGLLDRGVLIRD---V-GIPGWLRVTIG----TPEENDAFLAALAEVLA 363 (368)
T ss_pred ----HHHHHHHHHHCCEEEEe---C-CCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 13567788888865432 1 22469999985 67899999999988653
No 265
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.00 E-value=2.7e-07 Score=101.44 Aligned_cols=275 Identities=12% Similarity=0.093 Sum_probs=166.9
Q ss_pred CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHH
Q psy1785 275 GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPES 354 (629)
Q Consensus 275 ~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~ 354 (629)
.+.++|+|++++...++.+... |...|++..-++......++..|+ +++.||++++| +|++.
T Consensus 142 ~~Iiit~G~~~al~~~~~~l~~--------------pgd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~g-~~~~~ 203 (431)
T PRK15481 142 FEIDLTSGAIDAIERLLCAHLL--------------PGDSVAVEDPCFLSSINMLRYAGF---SASPVSVDAEG-MQPEK 203 (431)
T ss_pred CeEEEecCcHHHHHHHHHHhCC--------------CCCEEEEeCCCcHHHHHHHHHcCC---eEEeeccCCCC-CCHHH
Confidence 4788899988887655553321 344566666777778889999999 99999998766 89999
Q ss_pred HHHHHHHHHhCCCCcEEEEEe-eCCCccccccCHH---HHHHHHHHc-CCeEEE--ecCccccccccccccccccccccc
Q psy1785 355 LRGEIQRTLAEGAVPFMVSAT-SGTTVLGAFDPIP---AIADICAEY-DMADSV--TWNPHKLLTAPQQCSVFLTRRNYV 427 (629)
Q Consensus 355 Le~~i~~~~~~g~~~~~Vvat-~Gtt~~G~idpl~---ei~~i~~~~-~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~ 427 (629)
|++++.. .+.+++.+ ...+.+|.+-+.+ +|.++|+++ ++|+.+ +|+-... .+. .+ .+..
T Consensus 204 l~~~~~~------~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~--~~~-~~-~~~~---- 269 (431)
T PRK15481 204 LERALAQ------GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSS--SPY-HS-VIPQ---- 269 (431)
T ss_pred HHHHHhc------CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhcc--CCC-CC-CCcC----
Confidence 9888753 13344444 7889999998876 888999999 988888 6654321 110 01 0010
Q ss_pred cCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhc
Q psy1785 428 IEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAK 507 (629)
Q Consensus 428 i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~ 507 (629)
... --.+..++.|.++.-+-+|.++. ++.+........ .+. . .+ ...+..+++..++
T Consensus 270 ~~~-~vi~~~SfSK~~~~GlRiG~~i~-~~~~~~~~~~~~-~~~--------------~---~~---~s~~~q~a~~~~l 326 (431)
T PRK15481 270 TTQ-RWALIRSVSKALGPDLRLAFVAS-DSATSARLRLRL-NSG--------------T---QW---VSHLLQDLVYACL 326 (431)
T ss_pred CCC-CEEEEeeeccccCCCceeEEEeC-CHHHHHHHHHHH-hcc--------------c---cC---CCHHHHHHHHHHH
Confidence 011 23677889999984345786665 333333221000 000 0 00 1223333333344
Q ss_pred Chhh----HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHh
Q psy1785 508 GTDG----LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMK 583 (629)
Q Consensus 508 G~~G----~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~ 583 (629)
.... +++..+...+..+++.+.|++. ++++.. |.-+.+.+--.|.. ..++.+.|.+
T Consensus 327 ~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~--p~gg~f~~~~l~~~-----------------~~~~~~~l~~ 386 (431)
T PRK15481 327 TDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPS--PGDGLNLWLPLDTD-----------------SQATALTLAK 386 (431)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccc--CCCeEEEEEECCCC-----------------HHHHHHHHHH
Confidence 3222 4455566666777888888886 776433 55554433212211 0245666777
Q ss_pred cCcEEEeeeec--CCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 584 SGSMMITYQPI--HALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 584 ~G~~~i~~~~~--~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
+|..+..+..+ .+..++||++++ ..++++++..++.|.++.
T Consensus 387 ~gV~v~pg~~f~~~~~~~~iRis~~--~~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 387 SGWLVREGEAFGVSAPSHGLRITLS--TLNDAEINRLAADLHQAL 429 (431)
T ss_pred CCcEEecCCccccCCCCCeEEEEcC--CCChHHHHHHHHHHHHHh
Confidence 88765443322 122358999996 356899999999998764
No 266
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=98.99 E-value=2.9e-07 Score=99.91 Aligned_cols=299 Identities=16% Similarity=0.163 Sum_probs=160.2
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCC
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSD 337 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~ 337 (629)
...++.++++++.|. ....+++||++++..++.+++.... +.|. ....++......|-....+....+....
T Consensus 82 ~~~~la~~l~~~~~~--~~v~~~~gg~eA~~~al~~a~~~~~----~~~~--~~~~ii~~~~~yhg~~~~~~~~~~~~~~ 153 (396)
T PRK02627 82 PQEELAEKLVELSGM--DKVFFCNSGAEANEAAIKLARKYGH----KKGI--EKPEIITAENSFHGRTLATLSATGQPKY 153 (396)
T ss_pred HHHHHHHHHHhhcCC--CEEEECCCcHHHHHHHHHHHHHHhc----ccCC--CCCeEEEECCCcCcccHHHHHhcCCccc
Confidence 345566677777765 4789999999999999998876421 0111 0133555666667654444444332100
Q ss_pred CEEEEecCCCC----CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccc----cccCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 338 NVYLIKTDARG----RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLG----AFDPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 338 ~v~~V~~d~~g----~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G----~idpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
.....+..++- ..|+++|++++.+ .+.+|+.....+..| ..+.+++|+++|+++++++++ ++.+
T Consensus 154 ~~~~~~~~~~~~~~~~~d~~~l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g 227 (396)
T PRK02627 154 QEGFEPLVEGFIYVPFNDIEALKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTG 227 (396)
T ss_pred cccCCCCCCCceEeCCCCHHHHHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcC
Confidence 00011111110 1288889888732 234455444344444 234589999999999999999 6665
Q ss_pred cccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 408 HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
....... . .....++ . .|.+++ -|.++..+..|.++.+++ ..... .. ... ..
T Consensus 228 ~g~~g~~--~----~~~~~~~-~-pdi~t~--sK~~~~G~rig~~~~~~~-~~~~~-~~----~~~----------~~-- 279 (396)
T PRK02627 228 MGRTGKL--F----AYQHYGI-E-PDIMTL--AKGLGGGVPIGAVLAKEK-VADVF-TP----GDH----------GS-- 279 (396)
T ss_pred CCccCce--e----eehhcCC-C-CCEEEE--cchhhCCcccEEEEEcHH-HHhcc-CC----CCC----------CC--
Confidence 3211110 0 0001122 2 566665 488886667888887653 33221 10 000 00
Q ss_pred cCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCCceEEEEEeeCCCCCCCCch
Q psy1785 488 HIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPECTNISFWYIPPSLRGKEDQ 563 (629)
Q Consensus 488 ~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~ 563 (629)
+ -++.......+..+++.+..++ +.++..++.+++++.|++. +.+..+ ......+.+.+ +..
T Consensus 280 t-~~~~~~~~~aa~~~l~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~g~~~~i~~-~~~------- 345 (396)
T PRK02627 280 T-FGGNPLACAAALAVIEIIEEEG---LLENAAEVGEYLRAKLRELLEKYPGIKEV--RGLGLMIGIEL-DRP------- 345 (396)
T ss_pred C-CCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhCCCeeee--ccCcEEEEEEe-cCc-------
Confidence 0 1222223333333444333333 4455555666666666543 222211 12223333433 100
Q ss_pred hhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 564 ADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 564 ~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..++.++|.++|.++ ... + .+++|++++ ...++++|+.+++.|+++.++
T Consensus 346 ----------~~~~~~~l~~~Gv~v-~~~---~-~~~lRi~~~-~~~~~~~i~~~~~~l~~~l~~ 394 (396)
T PRK02627 346 ----------AAEIVKKALEKGLLI-NVT---G-DNVLRLLPP-LIISKEEIDEAVDRLEEVLKE 394 (396)
T ss_pred ----------HHHHHHHHHHCCeEE-eec---C-CCEEEEECC-cccCHHHHHHHHHHHHHHHHh
Confidence 135677888888654 221 1 257999984 788999999999999887654
No 267
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.98 E-value=7.4e-07 Score=96.36 Aligned_cols=311 Identities=15% Similarity=0.142 Sum_probs=187.9
Q ss_pred HHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC------
Q psy1785 261 HVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG------ 333 (629)
Q Consensus 261 ~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG------ 333 (629)
+..+.+.+++.-+ ..-..|+++||+||-.|++.||... | ...+|...+.-|-...-++.+.|
T Consensus 103 ~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~T-------g----r~~viaf~~afHG~T~galslT~~~~~~~ 171 (447)
T COG0160 103 ELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYT-------G----RPGVIAFDGAFHGRTLGALSLTGSKPPYK 171 (447)
T ss_pred HHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHh-------C----CCcEEEECCcccccchhhHHhccCccccc
Confidence 3344555555432 2458899999999999999999862 2 23466677777876666555432
Q ss_pred --CC--CCCEEEEecCCCCC------------CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 334 --LG--SDNVYLIKTDARGR------------MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 334 --lg--~~~v~~V~~d~~g~------------~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
.| ...|+.+|.....+ -..+.++..|.+.......+..+++---....|.+.| +++++++
T Consensus 172 ~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~ 251 (447)
T COG0160 172 AGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKL 251 (447)
T ss_pred cCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHH
Confidence 11 23588888754322 1234455556555444456666666655566666655 7899999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCcc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYL 471 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl 471 (629)
|++||+.+++ .-.|..-... +.-+.+.|+ . .|.+|+. |.++.-+..|.++.|.. +.. ... .-.
T Consensus 252 ~~~~gillI~DEVQtG~GRTG~------~fa~E~~gv-~-PDivt~a--K~ig~G~Pl~avv~r~e-i~~-~~~---g~~ 316 (447)
T COG0160 252 CREHGILLIADEVQTGFGRTGK------MFAFEHFGV-E-PDIVTLA--KSLGGGLPLSAVVGRAE-IMD-WPP---GGH 316 (447)
T ss_pred HHHcCCEEEEeccccCCCcccc------chhhhhcCC-C-CCEEEec--ccccCCCceeEEeccHH-hcc-cCC---ccc
Confidence 9999999999 2222211111 002233345 3 6998886 88887777888888773 222 110 000
Q ss_pred ccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCCC-ce-EE
Q psy1785 472 FQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEPE-CT-NI 548 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p~-~~-~v 548 (629)
.+ | -+|++..+.+..+.|+.+-.++ +.++..++.+||+++|.++. .+.++. +.+ .+ .+
T Consensus 317 ------------~~--T-f~GNpva~Aaa~AvL~vie~e~---L~~~a~~~G~~l~~~L~~l~~~~~~Ig-dVRG~Glm~ 377 (447)
T COG0160 317 ------------GG--T-FGGNPVACAAALAVLDVIEEEN---LLERAAELGEYLRDRLEELQEKHPLIG-DVRGLGLMI 377 (447)
T ss_pred ------------CC--C-CCcCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHhhcCcee-cccccceEE
Confidence 00 1 2455556666666777665654 56667778889988887642 244454 322 11 11
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
-..+.-+.-...+ + .+.+.++.+++.++|.++.+..+. .++||+..- -..+++++|..++.|++..++
T Consensus 378 giE~v~d~~t~~p-~-------~~~~~~i~~~~~~~Glil~~~G~~---~nviRi~PP-L~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 378 GVELVKDRDTKEP-D-------AELAAKIVARAFERGLLLLTCGPH---GNVLRILPP-LTISDEELDEGLDILEEALKE 445 (447)
T ss_pred EEEEecCCCCCCC-C-------HHHHHHHHHHHHHcCCEEeccCCC---CcEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 1222211111111 1 123457889999999876553322 369999984 678999999999999987654
No 268
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.97 E-value=6.8e-07 Score=94.82 Aligned_cols=281 Identities=13% Similarity=0.125 Sum_probs=168.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++.+|.+..+.++|+|++++...++. .. . |.-+++. .-+......+++..|. ++
T Consensus 43 ~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~-~~-~-------------~~~vv~~-~P~y~~y~~~~~~~G~---~v 103 (332)
T PRK06425 43 TDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLS-YI-N-------------VGNIIIV-EPNFNEYKGYAFTHGI---RI 103 (332)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH-Hh-C-------------CCcEEEe-CCChHHHHHHHHHcCC---eE
Confidence 566778999999998889999999998765543 21 1 3334444 4556667788999999 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+.||+++ ..+|++.+++ . .+.+|..+...+.+|.+-+ +.+|.++|+++++++.+ +|.-...-..
T Consensus 104 ~~vp~~~-~~~~~~~l~~-------~--~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~- 172 (332)
T PRK06425 104 SALPFNL-INNNPEILNN-------Y--NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA- 172 (332)
T ss_pred EEEeCCc-ccCcHHHHhh-------c--CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc-
Confidence 9999975 3445544431 1 2345666688999999866 55666678899999999 7665432110
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
.+. ..... +..-=.+..++-|.++.| .=+|.++.. +++.+........ +++
T Consensus 173 --~~~-~~~~~---~~~~vi~~~SfSK~~~l~GlRiGy~v~~-~~li~~l~~~~~~-----------------~~~---- 224 (332)
T PRK06425 173 --EED-VLLNR---SYGNVIIGRSLTKILGIPSLRIGYIATD-DYNMKISRKITEP-----------------WSV---- 224 (332)
T ss_pred --hhH-HHHhc---cCCCEEEEeecHHhcCCchhhheeeecC-HHHHHHHHHcCCC-----------------Ccc----
Confidence 000 00000 110125667889999855 346777664 3444432211110 011
Q ss_pred CcchHHHHHHHHhcChhhH-HHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 494 KPDVLKFWFMWKAKGTDGL-EAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 494 ~~~al~~w~~l~~~G~~G~-~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
...+..+ +.....+.+ ++..+...+..+++.+.|++. |++++. ++..+-+.+++ | .
T Consensus 225 ~~~~~~~---l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~~~g~f~~~~~-~-~---------------- 281 (332)
T PRK06425 225 CDPAIDF---IRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAG-DPSANFITFMI-P-D---------------- 281 (332)
T ss_pred CHHHHHH---HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC-CCCceEEEEEc-C-C----------------
Confidence 0011111 222222232 455666667788899999887 787654 45444344432 2 1
Q ss_pred HHHHHHHHHHhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..++.+.|.++|..........+ ..+++|+++. +.+++++|+++|+++.
T Consensus 282 -~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 282 -AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred -HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 13567788888865544333321 1369999997 6889999999998763
No 269
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.97 E-value=8.4e-07 Score=97.99 Aligned_cols=305 Identities=10% Similarity=0.083 Sum_probs=174.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.++.+.+++++.-+.....|+.+||+||..|++.||.... .+| ...+|...+.-|-...-+....|-.
T Consensus 127 ~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~----~~g----r~~ii~~~~~yHG~t~~~ls~~~~~~~~~ 198 (459)
T PRK11522 127 AMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQS----PRG----KFTFIATSGAFHGKSLGALSATAKSTFRK 198 (459)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhc----cCC----CcEEEEecCCCCCCcHHHhhhcCCccccc
Confidence 4445556666532224689999999999999999997521 112 1234555566666544444333210
Q ss_pred -----CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--e
Q psy1785 336 -----SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 336 -----~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A 404 (629)
...+..+|.+ |.++|++.+++..+.+.....|++--.....|.+-| +++++++|++||+.+++ .
T Consensus 199 ~~~~~~~~~~~~~~~-----d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV 273 (459)
T PRK11522 199 PFMPLLPGFRHVPFG-----NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEV 273 (459)
T ss_pred CCCCCCCCCcccCCC-----CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccc
Confidence 1123334332 678899888765333334445555555556688777 99999999999999988 4
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
..|.--... +.-..+.|+. .|.+++ -|.++.- +++|.++.+++ .... +... .+....
T Consensus 274 ~tG~GRtG~------~~a~e~~gv~--PDivt~--gK~lggG~~Pigav~~~~~-i~~~-~~~~-~~~~~~--------- 331 (459)
T PRK11522 274 QTGMGRTGK------MFACEHENVQ--PDILCL--AKALGGGVMPIGATIATEE-VFSV-LFDN-PFLHTT--------- 331 (459)
T ss_pred eecCCccch------hhhhhccCCC--CCEEEe--chhhhCCCccceeEEEcHH-HHHH-hccC-CcccCC---------
Confidence 433211111 0011112342 688766 6888754 35788888763 3332 1111 111100
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcE-EEcc-CCCceEEEEEeeCCCCCCC
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFK-LVLD-EPECTNISFWYIPPSLRGK 560 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~-l~~~-~p~~~~v~F~~~p~~~~~~ 560 (629)
| -.+.+..+.....+|+.+-.++ ..++..++.++|++.|++.. .+. ++.+ .-.-..+.+.+..+
T Consensus 332 ----T-~~gnp~~~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~----- 398 (459)
T PRK11522 332 ----T-FGGNPLACAAALATINVLLEQN---LPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN----- 398 (459)
T ss_pred ----C-CCCCHHHHHHHHHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc-----
Confidence 1 1233444555566677665554 45677778888888887641 121 1210 01122333333211
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+....+.+.|.++|.++ .... .+ .+.+|+++. ...|++|||.+++.++++.+
T Consensus 399 -----------~~~~~i~~~l~~~Gvl~-~~~~-~~-~~~lr~~Pp-l~~t~~~id~~l~~l~~~l~ 450 (459)
T PRK11522 399 -----------EIGYNFASEMFRQRVLV-AGTL-NN-AKTIRIEPP-LTLTIEQCEQVLKAARKALA 450 (459)
T ss_pred -----------hHHHHHHHHHHHCCeEE-EecC-CC-CCEEEEECC-ccCCHHHHHHHHHHHHHHHH
Confidence 11246778888999653 3221 12 368999995 88999999999999987654
No 270
>PRK09148 aminotransferase; Validated
Probab=98.97 E-value=9.6e-07 Score=96.32 Aligned_cols=312 Identities=9% Similarity=0.047 Sum_probs=173.6
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|....+...+.+.+.+++.+..|++ .. +.++|+|++++...++.+... |...|++..-++...
T Consensus 64 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~--------------~gd~Vl~~~P~y~~~ 129 (405)
T PRK09148 64 YSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITA--------------PGDVILCPNPSYPIH 129 (405)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcC--------------CCCEEEEcCCCCccc
Confidence 4333344455566666666665754 34 689999999986655443221 333456666666667
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHcCCeEE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI---PAIADICAEYDMADS 402 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl---~ei~~i~~~~~~~lh 402 (629)
...+...|. +++.||.+.++. ++++|++.+.... ..+.+|+.+..++.+|.+-+. .+|.++|+++++++.
T Consensus 130 ~~~~~~~g~---~v~~v~~~~~~~-~~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii 202 (405)
T PRK09148 130 AFGFIMAGG---VIRSVPAEPDEE-FFPALERAVRHSI---PKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIIL 202 (405)
T ss_pred HHHHHhcCC---EEEEEeCCCCCC-CccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEE
Confidence 777788888 999999876543 3455666654321 245677778778899998776 577788999999999
Q ss_pred E--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 403 V--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 403 V--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
+ +|+....-..+ ...+.... +... ...++.++.|.++.| .-+|.++. ++.++...... ..++.
T Consensus 203 ~De~Y~~~~~~~~~--~~s~~~~~--~~~~-~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~~l~~~-~~~~~------- 268 (405)
T PRK09148 203 SDLAYSEIYFDGNP--PPSVLQVP--GAKD-VTVEFTSMSKTFSMAGWRMGFAVG-NERLIAALTRV-KSYLD------- 268 (405)
T ss_pred EeccchhhhcCCCC--CCChhhCC--CccC-cEEEEeccccccCCcchheeeeeC-CHHHHHHHHHH-HHHhc-------
Confidence 9 77653321110 00000110 0111 335678999999865 44677764 44444432110 01110
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhc--ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAK--GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~--G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~ 557 (629)
+ + ...+...++...+ +..-+++..+...+..+++.+.|++. ++++. .|.-+.++|--.|+..
T Consensus 269 -------~---~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~--~p~~g~f~~~~l~~~~ 332 (405)
T PRK09148 269 -------Y---G---AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP--PPAASMFAWAPIPEAF 332 (405)
T ss_pred -------c---C---CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCeeEEEEEECCCcc
Confidence 0 0 0111122222222 23334555666677788888999886 77543 3555544332223221
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.... ..++.+.+. +.|..+..+..... ..++||+++. .+.+.+...++.|.++.
T Consensus 333 ~~~~------------~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~~al~~l~~~l 388 (405)
T PRK09148 333 RHLG------------SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQRIRQAARNIKRFL 388 (405)
T ss_pred CCCC------------HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 1100 024555554 56765544322221 1368999985 35777776666665543
No 271
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.96 E-value=1.4e-07 Score=101.38 Aligned_cols=280 Identities=10% Similarity=0.038 Sum_probs=173.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++.+|++..+.++++|++++...++.+... |...|++..-+.......+...|+ ++
T Consensus 67 ~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~v 129 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLK--------------AGDNIVTAGATFPQYRHHAIIEGC---EV 129 (366)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcC--------------CCCEEEEcCCcHHHHHHHHHHcCC---EE
Confidence 3456677888899888899999999987655554321 334566676777777888899998 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH---HcCCeEEE--ecCcccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA---EYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~---~~~~~lhV--A~gg~~l~~~~ 414 (629)
+.||.+ ++.+|+++|++++.. .+.+|+.+...+.+|.+-+.+++.++++ +++ ++++ +|.....-..
T Consensus 130 ~~v~~~-~~~~d~~~l~~~~~~------~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~- 200 (366)
T PRK01533 130 KEVALN-NGVYDLDEISSVVDN------DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKD- 200 (366)
T ss_pred EEeecC-CCCcCHHHHHHHhCc------CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhcccc-
Confidence 999986 456999999887753 2345666788999999988777777665 344 5556 6653221100
Q ss_pred ccccccccccccccCC-cceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 415 QQCSVFLTRRNYVIEV-VADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~-gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
. .+. +. .++. .--.++.++-|.++.| +-+|.++. ++.+.......... +
T Consensus 201 ~-~~~-~~----~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~-----------------~----- 251 (366)
T PRK01533 201 F-PET-LP----LLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLP-----------------F----- 251 (366)
T ss_pred C-cch-hH----HhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCC-----------------C-----
Confidence 0 000 00 0111 1236778889998854 33566554 33444332111000 0
Q ss_pred CCcchHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 493 RKPDVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
....+..+++..++.... +++..+...+..+++.+.+++. |+++. +|..+-+.+++ |.
T Consensus 252 -~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~--~~~~nf~~~~~-~~---------------- 310 (366)
T PRK01533 252 -NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY--QSQTNFIFLPV-EN---------------- 310 (366)
T ss_pred -CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC--CCcCcEEEEeC-CC----------------
Confidence 123344444455554333 3444555666777777888776 77754 35544333332 21
Q ss_pred hHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 572 KVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 572 ~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..++.+.|.++|... .. . .+++|+++. +.+++++|+++|+++.+
T Consensus 311 --~~~~~~~l~~~GI~V-r~--~---~~~iRis~~----~~~~~~~l~~al~~~~~ 354 (366)
T PRK01533 311 --GGEIYEACAHAGFII-RP--F---PNGVRITVG----TREQNEGVISVLQQHFE 354 (366)
T ss_pred --HHHHHHHHHHCCcEE-cc--C---CCceEEeCC----CHHHHHHHHHHHHHHHH
Confidence 025677888899654 32 2 358999997 78999999999988753
No 272
>PRK08175 aminotransferase; Validated
Probab=98.95 E-value=2.5e-06 Score=92.78 Aligned_cols=315 Identities=8% Similarity=0.019 Sum_probs=176.0
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS 324 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S 324 (629)
.|....+...+.+.+.+++.+..|+. .. +.++|+|++++...++.... .|...|++..-++..
T Consensus 62 ~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~--------------~~gd~Vlv~~P~y~~ 127 (395)
T PRK08175 62 GYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATL--------------DHGDTVLVPNPSYPI 127 (395)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhC--------------CCCCEEEEcCCCCcc
Confidence 34444445666677777777766764 24 58889888887654433221 134456677777777
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHcCCeE
Q psy1785 325 IKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI---PAIADICAEYDMAD 401 (629)
Q Consensus 325 i~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl---~ei~~i~~~~~~~l 401 (629)
....+...|. +++.|+.++++ .++++|++++.+. ...+.+|+.+...+.+|.+-+. ++|.++|+++++++
T Consensus 128 ~~~~~~~~g~---~~~~v~~~~~~-~~~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~i 200 (395)
T PRK08175 128 HIYGAVIAGA---QVRSVPLVEGV-DFFNELERAIRES---YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLV 200 (395)
T ss_pred hHHHHHHcCC---eEEEEecccCC-CcHHHHHHHHhhc---cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEE
Confidence 7777788888 89999997654 3578888877642 1234456666667889988776 68888999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
++ +|..... .. ..+..+.... +.. +...++.++-|.++.| .-+|++.. ++++........ .+.
T Consensus 201 i~De~y~~l~~-~~-~~~~~~~~~~--~~~-~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~~~~~~~-~~~------- 266 (395)
T PRK08175 201 VHDLAYADIVY-DG-WKAPSIMQVP--GAK-DVAVEFFTLSKSYNMAGWRIGFMVG-NPELVSALARIK-SYH------- 266 (395)
T ss_pred EEecchHhhcc-CC-CCCcchhcCC--Ccc-cCEEEEeeccccccCcchhheeeeC-CHHHHHHHHHHH-hhc-------
Confidence 99 6653221 11 0000000000 011 1235678999999766 33676654 544444321100 000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceE-EEEEeeCCCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTN-ISFWYIPPSL 557 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~-v~F~~~p~~~ 557 (629)
++ +........+...+.. +..-+++..++..+..+++.+.|++. ++++. .|.-+. +.+++ |+..
T Consensus 267 -------~~---~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~--~p~~g~~i~i~l-~~~~ 331 (395)
T PRK08175 267 -------DY---GTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVE--MPKASMYVWAKI-PEPY 331 (395)
T ss_pred -------cc---CCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCEEEEEEEEC-Cccc
Confidence 00 1111111111122221 22334555555667788899999887 77654 344333 33333 2221
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.... ..++.+.+. +.|.......... ...++||+++. .+++.+...++.|.++.+
T Consensus 332 ~~~~------------~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 332 AAMG------------SLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred CCCC------------HHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHH
Confidence 1000 124555554 5676443322221 12358999985 367888888877776653
No 273
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=98.95 E-value=6.3e-07 Score=97.20 Aligned_cols=297 Identities=13% Similarity=0.064 Sum_probs=158.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.++++++.+. ....++++||+||..|+.++|.... ..|..+ ..-++.....-|-+..-+....+. ..
T Consensus 76 ~~la~~l~~~~~~--~~v~~~~sGseA~~~al~~ar~~~~----~~G~~~-r~~vi~~~~~yhg~~~~~~~~~~~---~~ 145 (389)
T PRK01278 76 ERLAERLVENSFA--DKVFFTNSGAEAVECAIKTARRYHY----GKGHPE-RYRIITFEGAFHGRTLATIAAGGQ---EK 145 (389)
T ss_pred HHHHHHHHhhCCC--CEEEEcCCcHHHHHHHHHHHHHHHH----hcCCCC-CCEEEEECCCcCCCcHHHHhccCC---hh
Confidence 3444556666543 4789999999999999999986421 223211 234666677777665544433332 11
Q ss_pred EE---EecCCCC----CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccc----cccCHHHHHHHHHHcCCeEEE--ecC
Q psy1785 340 YL---IKTDARG----RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLG----AFDPIPAIADICAEYDMADSV--TWN 406 (629)
Q Consensus 340 ~~---V~~d~~g----~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G----~idpl~ei~~i~~~~~~~lhV--A~g 406 (629)
.. .|..++. ..|+++|++.|.+ ...+|+..-..+..| .-+.+++|+++|++||+++++ ++.
T Consensus 146 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~------~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 219 (389)
T PRK01278 146 YLEGFGPLVPGFDQVPFGDIEALKAAITP------NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQC 219 (389)
T ss_pred hcccCCCCCCCceEeCCCCHHHHHHhhCC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence 10 0111111 2588999888753 233444443333334 346899999999999999999 665
Q ss_pred ccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCC
Q psy1785 407 PHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGD 486 (629)
Q Consensus 407 g~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 486 (629)
+.......+ .....++. .|.+++ -|.++.-+..|.++.+++ ..+. +.. ... ..
T Consensus 220 g~g~~g~~~------~~~~~~~~--pdi~t~--sK~l~~G~~ig~~~~~~~-~~~~-~~~----~~~----------~~- 272 (389)
T PRK01278 220 GMGRTGKLF------AHEWAGVT--PDIMAV--AKGIGGGFPLGACLATEE-AAKG-MTP----GTH----------GS- 272 (389)
T ss_pred CCCcCCcce------eecccCCC--CCEEEE--ehhccCCcceEEEEEcHH-HHhc-cCC----CCC----------CC-
Confidence 432211100 00111221 466554 688875455788877653 3221 110 000 00
Q ss_pred ccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCCceEEEEEeeCCCCCCCCc
Q psy1785 487 KHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 487 ~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~~~~v~F~~~p~~~~~~~~ 562 (629)
+ -++.+.....+..+++.+-.+++ .++..++.++++++|++. +++-... .+.-..+.+.+..+
T Consensus 273 -t-~~~~~~~~aaa~a~l~~l~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~v-~g~G~~~~i~~~~~------- 339 (389)
T PRK01278 273 -T-YGGNPLAMAVGNAVLDVILAPGF---LDNVQRMGLYLKQKLEGLVDRFPDVIEEV-RGKGLLLGLKCVVP------- 339 (389)
T ss_pred -C-CCccHHHHHHHHHHHHHHhhhHH---HHHHHHHHHHHHHHHHHHHhhCCCceeeE-ecccEEEEEEEecC-------
Confidence 1 12223333334444554433333 344445566666665542 2221111 12212222222110
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
..++.+.|.++|.++... + .+++|+++. ...+++||+.+++.|++..++|
T Consensus 340 -----------~~~~~~~l~~~GV~~~p~----~-~~~lR~~p~-~~~~~~~i~~~l~~l~~~l~~~ 389 (389)
T PRK01278 340 -----------NRDLVQALRDEGLLTVGA----G-DNVVRLLPP-LIITEEEIDEALERLERAAESL 389 (389)
T ss_pred -----------HHHHHHHHHHCCeEEeec----C-CCEEEEeCC-cccCHHHHHHHHHHHHHHHHhC
Confidence 135677888888654321 2 358999984 6789999999999999887654
No 274
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.95 E-value=1.3e-06 Score=97.07 Aligned_cols=314 Identities=12% Similarity=0.142 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHhC----CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH-Hc
Q psy1785 258 MEEHVLAQMRTIVG----FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA-FE 332 (629)
Q Consensus 258 ~E~~~~~~l~~l~G----~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~-~l 332 (629)
+-+.+.+++.+.+| ++..+.++|+|+++++...+.+-. .|...|++..-+...+...+. ..
T Consensus 91 LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~--------------~pGd~Vlv~~P~Y~~~~~~~~~~~ 156 (468)
T PLN02450 91 FKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA--------------EPGDAFLLPTPYYPGFDRDLKWRT 156 (468)
T ss_pred HHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC--------------CCCCEEEECCCCCCchHHHHhhcC
Confidence 44455555655545 344678889998888655544322 144455665555555656666 47
Q ss_pred CCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ec
Q psy1785 333 GLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 333 Glg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~ 405 (629)
|. +++.||++ ++..+|++.|++++++..+++..+.+|..+...+-+|.+-+ +.+|.++|+++++|+.+ +|
T Consensus 157 g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y 233 (468)
T PLN02450 157 GV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIY 233 (468)
T ss_pred Cc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccc
Confidence 87 89999986 34578999999999876666656667777788899998866 45667778899999999 77
Q ss_pred Cccccccccccccccccc-c--cc-ccC-CcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 406 NPHKLLTAPQQCSVFLTR-R--NY-VIE-VVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~-~--~~-~i~-~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
+...+-..++. + .+.. . .+ +.. ..==.+..++-|.++.| +=+|+++..++.+.. .......|.
T Consensus 234 ~~~~f~~~~~~-s-~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~-~~~~~~~~~-------- 302 (468)
T PLN02450 234 SGTVFDSPGFV-S-VMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVS-AATKMSSFG-------- 302 (468)
T ss_pred cccccCCCCcc-c-HHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHH-HHHHHhhcC--------
Confidence 65433211110 1 0110 0 00 000 00125678999998744 558888775443332 211111110
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChh-----hHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTD-----GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIP 554 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~-----G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p 554 (629)
+ ...+...++..++... -+++..++..+..+.+.+.|++. |+++. +|.-+.+++--.+
T Consensus 303 -----------~---~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~--~~~~g~flwi~l~ 365 (468)
T PLN02450 303 -----------L---VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL--KSNAGLFCWVDMR 365 (468)
T ss_pred -----------C---CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCceEEEEEEch
Confidence 0 0112222223333222 24555666677778888889887 77654 4555544332112
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..+.. ..+... .++.+++.+ .|..+..+..+. ..+++||+++++ .++++++..++.|+++.+
T Consensus 366 ~~~~~----~~~~~~-----~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~~l~ 429 (468)
T PLN02450 366 HLLKS----NTFEAE-----MELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKSFVE 429 (468)
T ss_pred HhcCc----CCchHH-----HHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHHHHH
Confidence 21111 011110 234555554 676543333222 224699999973 567889988888877643
No 275
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.95 E-value=5.8e-07 Score=96.78 Aligned_cols=289 Identities=11% Similarity=0.020 Sum_probs=172.0
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+.+++.++++..+.++++|++++...++.+.. .|...|++..-+++.+...+...|. ++
T Consensus 70 ~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~--------------~~gd~vlv~~p~y~~~~~~~~~~g~---~~ 132 (369)
T PRK08153 70 HDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYV--------------EPGDPVVTSLGAYPTFNYHVAGFGG---RL 132 (369)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhc--------------CCCCEEEECCCcchHHHHHHHHcCC---eE
Confidence 355666777788877788888888886554443221 1445677777777778888888888 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--CCeEEE--ecCccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--DMADSV--TWNPHKLLTAPQ 415 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~~~lhV--A~gg~~l~~~~~ 415 (629)
+.||.++++ +|+++|++.+.. . .+.+|+.+...+.+|.+-|.+++.++++.+ ++++.+ +|+....-..
T Consensus 133 ~~vp~~~~~-~~~~~l~~~~~~----~-~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~-- 204 (369)
T PRK08153 133 VTVPYRDDR-EDLDALLDAARR----E-NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGA-- 204 (369)
T ss_pred EEeeCCCCC-CCHHHHHHHhcc----c-CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCccc--
Confidence 999987664 788877766542 1 233555667888899999999988888765 788888 7654321100
Q ss_pred cccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 416 QCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 416 ~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
+. .... ... --.+..++-|.++.| .-+|.++... +..+....... + + +
T Consensus 205 -~~---~~~~--~~~-~~i~~~SfSK~~g~~GlRiG~~v~~~-~~~~~l~~~~~-~----------------~---~--- 253 (369)
T PRK08153 205 -AP---PIDT--DDP-NVIRMRTFSKAYGLAGARVGYAIGAP-GTIKAFDKVRN-H----------------F---G--- 253 (369)
T ss_pred -ch---hhhh--cCC-CEEEEecchHhccCcchheeeeecCH-HHHHHHHHhhc-C----------------C---C---
Confidence 00 0000 011 236688889999855 3356766643 34432211110 0 0 0
Q ss_pred cchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhH
Q psy1785 495 PDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKV 573 (629)
Q Consensus 495 ~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~ 573 (629)
...+..+++...+.. +-+++..+...+..+++.+.|++. |+... |....+.+.-.+.. . + .
T Consensus 254 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~---p~~~~f~~~~~~~~--~-----~-------~ 315 (369)
T PRK08153 254 MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL---PSATNFVAIDCGRD--G-----A-------F 315 (369)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC---CCcCcEEEEECCCC--c-----c-------c
Confidence 122333333333332 334555566667778888888875 77532 33333322111110 0 0 1
Q ss_pred HHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 574 APKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 574 ~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
...+.+.|.++|..+-.... ....+++|+++. +++|+++++++|+++..
T Consensus 316 a~~l~~~l~~~Gi~v~~p~~-~~~~~~iRis~~----~~~~~~~~~~al~~~~~ 364 (369)
T PRK08153 316 ARAVLDGLIARDIFVRMPGV-APLDRCIRVSCG----PDEELDLFAEALPEALE 364 (369)
T ss_pred HHHHHHHHHHCCeEEeeCCC-CCCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 23677788888865412211 112358999985 68999999999987653
No 276
>PRK07049 methionine gamma-lyase; Validated
Probab=98.94 E-value=6.5e-07 Score=98.12 Aligned_cols=223 Identities=12% Similarity=0.160 Sum_probs=144.5
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH---
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL--- 328 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka--- 328 (629)
.|....+|+ .++++.|.+ +.+++++|+.++..++.+... |...|+++..........
T Consensus 82 ~Pt~~~Le~----~lA~leg~~--~~iv~~sG~~Ai~~~l~al~~--------------~Gd~Vv~~~p~Y~~~~~~~~~ 141 (427)
T PRK07049 82 HPNSEIVED----RLAVYEGAE--SAALFSSGMSAIATTLLAFVR--------------PGDVILHSQPLYGGTETLLAK 141 (427)
T ss_pred CcCHHHHHH----HHHHHhCCC--cEEEEccHHHHHHHHHHHHhC--------------CCCEEEEcCCCcccHHHHHHH
Confidence 354544444 477788754 688899999886655544322 333455565555444333
Q ss_pred -HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH------cCCeE
Q psy1785 329 -AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE------YDMAD 401 (629)
Q Consensus 329 -a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~------~~~~l 401 (629)
+...|+ +++.++. ..|+++|+++|.+..++. .+.+|.....++.+|.+-|+++|.++++. +++++
T Consensus 142 ~l~~~Gi---~~v~~~~----~~d~~~l~~~l~~~~~~~-~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~v 213 (427)
T PRK07049 142 TFRNFGV---GAVGFAD----GLSEAAIGAAAEAAAAKG-RVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPII 213 (427)
T ss_pred HHHhcCc---EEEEEeC----CCCHHHHHHHHHhhccCC-CceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEE
Confidence 345676 6666652 267888988887654332 35567777899999999999999999988 78888
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC--ccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ--QCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~--~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
.| +|.......+ ++.|+|.++.++.|++++.. -.|++. .++++.+.......
T Consensus 214 vvDety~~~~~~~p--------------l~~g~divv~S~SK~~gG~~glr~G~vv-~~~~l~~~l~~~~~--------- 269 (427)
T PRK07049 214 ACDNTLLGPVFQKP--------------LEHGADLSVYSLTKYVGGHSDLVAGAVL-GRKALIRQVRALRS--------- 269 (427)
T ss_pred EEECCccccccCCc--------------cccCCCEEEEcCceeecCCCCcEEEEEE-CCHHHHHHHHHHHH---------
Confidence 88 7654332111 23369999999999999532 255544 44444332211000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
..+.....+..|+.++.+ +-+..++++..+.+..+.+.|++.|+++-+.
T Consensus 270 ------------~~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~ 318 (427)
T PRK07049 270 ------------AIGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKLH 318 (427)
T ss_pred ------------hcCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 012223557777777654 5678888999999999999999999876543
No 277
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.92 E-value=1.8e-06 Score=95.23 Aligned_cols=311 Identities=14% Similarity=0.165 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHhC----CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH-Hc
Q psy1785 258 MEEHVLAQMRTIVG----FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA-FE 332 (629)
Q Consensus 258 ~E~~~~~~l~~l~G----~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~-~l 332 (629)
+-+.+.+++.+.+| ++..+.++|+|++.++.....+.. .|...|++..-....+..... ..
T Consensus 100 LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~--------------~pGD~Vlv~~P~Y~~f~~~~~~~~ 165 (447)
T PLN02607 100 FRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA--------------DPGDALLVPTPYYPGFDRDLRWRT 165 (447)
T ss_pred HHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC--------------CCCCEEEEcCCCCcchHHHHHhcC
Confidence 33444455555544 344678899999998765544321 133445555555555555555 35
Q ss_pred CCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ec
Q psy1785 333 GLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 333 Glg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~ 405 (629)
|+ +++.|+++++ ..+|+++|++++.+..++|.....|+.+...+.+|.+-| +.+|.++|+++++++++ +|
T Consensus 166 g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiY 242 (447)
T PLN02607 166 GV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIY 242 (447)
T ss_pred Cc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccc
Confidence 77 8888888743 469999999999988777777777888889999998866 67888889999999999 66
Q ss_pred Cccccccccccccccccc-ccc---c-cCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 406 NPHKLLTAPQQCSVFLTR-RNY---V-IEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~-~~~---~-i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
....+-..++. + ++.. ..+ + -++ + .++++.-|.++.| +=.|+++..++.+...... ...|.
T Consensus 243 a~~~f~~~~f~-S-~~s~~~~~~~~~~~~~-v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~-~~~~~-------- 309 (447)
T PLN02607 243 SGSVFSASEFV-S-VAEIVEARGYKGVAER-V-HIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARR-MSSFT-------- 309 (447)
T ss_pred cccccCCCCcc-c-HHHHHhhcCCCCCcCc-E-EEEEcchhcCCCCcceEEEEEEcCHHHHHHHHH-HhhcC--------
Confidence 65443211110 0 0010 000 0 012 3 4568999998755 4478888765544332211 00010
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChhh-----HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDG-----LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIP 554 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G-----~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p 554 (629)
..+ .+.-.++...+.... +++..++..+..+.+.+.|++. |++.. ++.-+.+++--.+
T Consensus 310 ----------~~s----~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~--~~~ag~fvw~~L~ 372 (447)
T PLN02607 310 ----------LVS----SQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL--KGNAGLFCWMNLS 372 (447)
T ss_pred ----------CCC----HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc--cCCeeEEEEEEch
Confidence 011 111122222232222 2333444555667778888875 77644 3555554432112
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..+.. ..... ..++.+++.+ .|..+..+.... ..++|||+++++ .++++++..++.|.++.
T Consensus 373 ~~~~~----~~~~~-----e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l 435 (447)
T PLN02607 373 PLLET----PTREG-----ELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFM 435 (447)
T ss_pred HhhcC----CCchh-----HHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHH
Confidence 11100 00000 1245556655 575443333222 235799999963 45788888887776654
No 278
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.92 E-value=3.1e-06 Score=92.94 Aligned_cols=303 Identities=9% Similarity=0.059 Sum_probs=170.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+++++++.-+.....|+.+||+||..|++.||.... ..| ...+|...+.-|-...-+..+.+-
T Consensus 120 ~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~----~~g----r~~ii~~~~~yHG~t~~~ls~t~~~~~~~ 191 (442)
T TIGR03372 120 ALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQS----PRG----KFTFIAASGAFHGKSLGALSATAKPAFRK 191 (442)
T ss_pred HHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHh----hcC----CcEEEEECCCccCCCHHHhhccCCcccCC
Confidence 4455566666543324578999999999999999997521 123 123556666677654444433221
Q ss_pred --C--CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--e
Q psy1785 335 --G--SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 335 --g--~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A 404 (629)
+ ...+..+|.+ |.+.+++.+++..+.+.....|+.--.....|.+-| +++++++|++||+.+++ .
T Consensus 192 ~~~p~~~~~~~~p~~-----d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV 266 (442)
T TIGR03372 192 PFMPLLPGFHHVAFG-----DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEV 266 (442)
T ss_pred CCCCCCCCCEEeCCC-----CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeec
Confidence 0 1234555543 577888888654433444445555545555678888 99999999999999988 4
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
..|.--... +.-..+.|+ . .|.++ .-|.++.- +++|.++.++ +.... +.. ..++...
T Consensus 267 ~tG~GRtG~------~~a~e~~gv-~-PDivt--~gK~lg~G~~Pigavv~~~-~i~~~-~~~-~~~~~~~--------- 324 (442)
T TIGR03372 267 QTGMGRTGK------MFACEHEGV-Q-PDILC--LAKALGGGVMPIGATIATE-AVFSV-LFD-NPFLHTT--------- 324 (442)
T ss_pred ccCCCcccc------chhhhhcCC-C-CCeee--ehhhhcCCcccceEEEecH-HHHHh-hhc-cCccccC---------
Confidence 433211111 001111234 2 68887 47888754 3477787765 33322 211 1111110
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcE-EEcc-CCCceEEEEEeeCCCCCCC
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFK-LVLD-EPECTNISFWYIPPSLRGK 560 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~-l~~~-~p~~~~v~F~~~p~~~~~~ 560 (629)
| -.+.+..+...-.+|+.+-.+++ .++..++.++|++.|+++. .+. .+.+ .-.-..+.+.+..+
T Consensus 325 ----T-~~gnp~~~Aaa~a~L~~i~~~~l---~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~----- 391 (442)
T TIGR03372 325 ----T-FGGNPLACAAALATINELLEKNL---PAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDN----- 391 (442)
T ss_pred ----C-CCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCCh-----
Confidence 1 12334444445555666555543 4455667777777776541 111 1110 01122233333210
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
+....+.+.|.++|.++ .... .+ .+.+|+.+. ...|++|||.+++.+++.
T Consensus 392 -----------~~~~~i~~~l~~~Gvl~-~~~~-~~-~~~lr~~Pp-l~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 392 -----------EIGYAFAKELFQQNILV-AGTL-NN-AKSIRIEPP-LTITIEQCALVIKAAKDA 441 (442)
T ss_pred -----------HHHHHHHHHHHHCCcEE-eecC-CC-CCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence 11246788888999654 3221 12 258999995 899999999999999874
No 279
>PLN02231 alanine transaminase
Probab=98.90 E-value=4.1e-06 Score=94.27 Aligned_cols=333 Identities=12% Similarity=0.082 Sum_probs=185.6
Q ss_pred cccccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH
Q psy1785 247 YTYEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS 324 (629)
Q Consensus 247 ~~~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S 324 (629)
..|..+.+...+-+.+.+++.+-.|++ ..+.++|+|++++...++.+.... |...|++..-++..
T Consensus 162 ~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~-------------~gd~Vli~~P~Y~~ 228 (534)
T PLN02231 162 GAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRS-------------EKDGILCPIPQYPL 228 (534)
T ss_pred cCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccC-------------CCCEEEEeCCCChh
Confidence 345555566666666667776655654 368899999999877666543321 23446666666667
Q ss_pred HHHHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCC
Q psy1785 325 IKKLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDM 399 (629)
Q Consensus 325 i~kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~ 399 (629)
...++...|. .++.++.+++ +.+|+++|++++.+...++..+.+++.+...+-+|.+- .+.+|.++|+++++
T Consensus 229 y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l 305 (534)
T PLN02231 229 YSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGL 305 (534)
T ss_pred HHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 7778888898 8999999854 58999999999987666554566666677788889885 56677888999999
Q ss_pred eEEE--ecCcccccc-cccccccccccc-cccc-CCcceEEE-eCCCCCC-CCC-CccEEEEEe--ccchhhhhhcCCCC
Q psy1785 400 ADSV--TWNPHKLLT-APQQCSVFLTRR-NYVI-EVVADSVT-WNPHKLL-TAP-QQCSVFLTR--HQSVLTECHSASAS 469 (629)
Q Consensus 400 ~lhV--A~gg~~l~~-~~~~~~~~l~~~-~~~i-~~gaDsv~-~~~HK~l-~~P-~~~g~ll~r--~~~~l~~~~~~~~~ 469 (629)
++.. +|.-..+-. .+. .+ +.... .++. +.....++ .+.-|.+ +.| .=+|.+.+- ++.......... .
T Consensus 306 ~lI~DEvY~~l~y~~~~~~-~s-~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~-~ 382 (534)
T PLN02231 306 VLLADEVYQENVYVPDKKF-HS-FKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVA-S 382 (534)
T ss_pred EEEEEccchhcccCCCCCc-cc-HHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHH-h
Confidence 9998 665533211 100 00 00100 0011 01122343 4889965 333 447777653 333333221100 0
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHh--cChhhHHH-------HHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKA--KGTDGLEA-------HIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~--~G~~G~~~-------~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
. ..|+....-..+..+++- .|...|.. +.+...+.++++.+.|++.+|+++.
T Consensus 383 -~-----------------~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~- 443 (534)
T PLN02231 383 -V-----------------NLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN- 443 (534)
T ss_pred -h-----------------hcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-
Confidence 0 013222211112222211 12233332 2445667788899999998898864
Q ss_pred cCCCceEEEE-Eee-CCCCCCCCchhhHHHHHhhH-HHHHHHHHH-hcCcEEEeeeecCC--ccceEEEeecCCCCCHHH
Q psy1785 541 DEPECTNISF-WYI-PPSLRGKEDQADFNELLHKV-APKIKERMM-KSGSMMITYQPIHA--LPNFFRLVLQNSALDHSD 614 (629)
Q Consensus 541 ~~p~~~~v~F-~~~-p~~~~~~~~~~~~~~~l~~~-~~~i~~~l~-~~G~~~i~~~~~~~--~~~~lR~~~~n~~~t~ed 614 (629)
+|+-+.+.| ++. |.. .. +-.+.+... ...+..+|. +.|..++.+..... ...+||+++. .++++
T Consensus 444 -~p~Ggfylw~~l~lp~~--~~----~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~---~~~e~ 513 (534)
T PLN02231 444 -KAEGAMYLFPRIHLPQK--AI----KAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL---PQEDK 513 (534)
T ss_pred -CCCeeeEEeccccCcHH--HH----HHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC---CCHHH
Confidence 466666555 121 110 00 000000000 012334444 56866554433321 1246999884 57788
Q ss_pred HHHHHHHHHHHhh
Q psy1785 615 MDYFIDEIERLGH 627 (629)
Q Consensus 615 id~l~~~i~~l~~ 627 (629)
|+..++.|.++.+
T Consensus 514 l~eal~RL~~~~~ 526 (534)
T PLN02231 514 IPAIVSRLTEFHK 526 (534)
T ss_pred HHHHHHHHHHHHH
Confidence 8777777766543
No 280
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.90 E-value=4.2e-07 Score=99.15 Aligned_cols=298 Identities=13% Similarity=0.067 Sum_probs=166.1
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.++.+.++++++. ....|+.+|++||..|+..||.... ..+..+ ...++...+.-|-+..-+..+.+-.
T Consensus 84 ~~la~~l~~~~~~--~~v~~~~sGseA~e~Alk~ar~~~~----~~~~~~-r~~ii~~~~~yHG~t~~~~~~~~~~~~~~ 156 (406)
T PRK12381 84 LRLAKKLIDATFA--DRVFFCNSGAEANEAALKLARKYAH----DRYGSH-KSGIVAFKNAFHGRTLFTVSAGGQPKYSQ 156 (406)
T ss_pred HHHHHHHHhhCCC--CeEEEcCCcHHHHHHHHHHHHHHHh----hcCCCC-CCeEEEECCCcCCcchhHHhhcCCccccc
Confidence 3445566676654 4789999999999999999986521 112111 2345666777787766554444320
Q ss_pred -----CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccc----cccCHHHHHHHHHHcCCeEEE--e
Q psy1785 336 -----SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLG----AFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 336 -----~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G----~idpl~ei~~i~~~~~~~lhV--A 404 (629)
...+..+|. -|+++|++.+.+ ...+|+..-.....| ..+.+++|+++|++||+++.+ +
T Consensus 157 ~~~~~~~~~~~~~~-----~d~~~l~~~l~~------~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv 225 (406)
T PRK12381 157 DFAPLPPDIRHAAY-----NDLNSASALIDD------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEV 225 (406)
T ss_pred CCCCCCCCeeEeCC-----CCHHHHHHhccC------CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcch
Confidence 012333332 378888887752 233444443333334 347799999999999999998 5
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
+.+.......+ .....++. .|.+++ -|.++.-+..|.++.+++ +... +.. ... .
T Consensus 226 ~tG~gr~G~~~------~~~~~~v~--pDi~t~--sK~l~gG~~ig~~~~~~~-~~~~-~~~---~~~-----------~ 279 (406)
T PRK12381 226 QTGVGRTGELY------AYMHYGVT--PDVLTT--AKALGGGFPIGAMLTTEK-CASV-MTV---GTH-----------G 279 (406)
T ss_pred hhCCCCCcchh------hhHhhCCC--CCEEEe--hhhhhCCCceEEEEEcHH-HHhh-cCC---CCC-----------C
Confidence 54432111100 00111232 576555 588875566788887653 3322 110 000 0
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCC-CceE-EEEEeeCCCCCCCC
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEP-ECTN-ISFWYIPPSLRGKE 561 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p-~~~~-v~F~~~p~~~~~~~ 561 (629)
.+ -++.+.....+..+++.+..+ +..++..++.++|.+.|++.. .+.++. .+ ..+. +.+.+.++
T Consensus 280 --~t-~~~~pl~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~-~vrg~Gl~~~~~l~~~------ 346 (406)
T PRK12381 280 --TT-YGGNPLASAVAGKVLELINTP---EMLNGVKQRHDWFVERLNTINARYGLFS-EIRGLGLLIGCVLNAE------ 346 (406)
T ss_pred --CC-CCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCEE-EEecCeEEEEEEecCc------
Confidence 01 123333334444444444332 456677778888888887751 122222 11 1121 22222110
Q ss_pred chhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 562 DQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 562 ~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
. ......+.+.|.++|.++.. . + ++.+|+++. ...|++|||.+++.|+++.++
T Consensus 347 ----~----~~~~~~~~~~l~~~Gv~v~~-~---g-~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 347 ----Y----AGKAKQISQEAAKAGVMVLI-A---G-PNVVRFAPA-LNISEEEITTGLDRFARACER 399 (406)
T ss_pred ----h----hhHHHHHHHHHHHCCcEEee-C---C-CCEEEEeCC-ccCCHHHHHHHHHHHHHHHHH
Confidence 0 01124677888999975421 1 2 258999995 778999999999999876543
No 281
>KOG2467|consensus
Probab=98.90 E-value=8.1e-07 Score=90.95 Aligned_cols=331 Identities=16% Similarity=0.138 Sum_probs=190.1
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC-CCeEEe--CCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFC--PGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~--~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|.......++|.-+++...++||+++ .+|+-+ -+||-||+.+-.+.... -.+--|+. .|.. ...+|--.
T Consensus 78 YGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~P---h~RiMGLD-LP~G----GHLsHGy~ 149 (477)
T KOG2467|consen 78 YGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKP---HERIMGLD-LPSG----GHLSHGYQ 149 (477)
T ss_pred cCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCC---CCeeeecc-CCCC----Cccccccc
Confidence 34456678899999999999999997 355443 37888888665443321 11111211 1110 00111000
Q ss_pred HHHHHHcCCC-CCCEEEEecC-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE
Q psy1785 326 KKLAAFEGLG-SDNVYLIKTD-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 326 ~kaa~~lGlg-~~~v~~V~~d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV 403 (629)
-..-++.... --+-..-.+| .+|-||.+.||+..... +|.+++ +|++.+--.-|...+++||.+.|+.+.+
T Consensus 150 T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY~R~~DYaR~R~Iad~~gA~Lm~ 222 (477)
T KOG2467|consen 150 TPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLF-----RPKLII--AGTSAYSRLIDYARFRKIADKVGAYLMA 222 (477)
T ss_pred cCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhc-----CCcEEE--eccccchhhccHHHHHHHHHhcCceeeh
Confidence 0000011100 0011122345 56999999999876653 566554 5778888878899999999999999877
Q ss_pred --ec-CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccc-hhhhhhcCCCCccccCCcCCC
Q psy1785 404 --TW-NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQS-VLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 404 --A~-gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~-~l~~~~~~~~~yl~~~~~~~~ 479 (629)
|+ .|.+.... ... .++. +|+|+...||.|-+|.+ |++++|+.- ....-......|=...
T Consensus 223 DMAHISgLVAA~v--------ips--PFey-~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~ydlE~----- 285 (477)
T KOG2467|consen 223 DMAHISGLVAAGV--------IPS--PFEY-CDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILYDLED----- 285 (477)
T ss_pred hhhhHHHHHhccc--------CCC--cccc-cceeeccccccccCCcc-eeEEEeccCCcCCCCCCCcceechhh-----
Confidence 43 22221110 001 1577 99999999999999986 556666521 0000000000111100
Q ss_pred cccC-CCCccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC
Q psy1785 480 TKYD-SGDKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 480 ~~~~-~~~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~ 557 (629)
..+ ..-.++|+|-+. .+..+..+|+.-..-.|++..++..++++.|.+.|.++ |++++..-.+...|...+.|.++
T Consensus 286 -kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~ 363 (477)
T KOG2467|consen 286 -KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGV 363 (477)
T ss_pred -hhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCC
Confidence 001 111356777665 45667778888888999999999999999999999998 99999743455566667778777
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEe-eeecCCccceEEEee---cCCCCCHHHHHHHHHHHHHH
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMIT-YQPIHALPNFFRLVL---QNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~~~~~~lR~~~---~n~~~t~edid~l~~~i~~l 625 (629)
+|. . ..++...+.-.++++ . +.+ ...+ .+.-+|+.. ++-..-++|++++.+-|.+.
T Consensus 364 dGa----r----vE~vle~~~I~~NKN-t-vpGD~Sal--~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~a 423 (477)
T KOG2467|consen 364 DGA----R----VEKVLELCHIALNKN-T-VPGDKSAL--SPGGIRIGTPAMTSRGFGEEDFEKVADFIDRA 423 (477)
T ss_pred chH----H----HHHHHHHhhhhhcCC-c-CCCCcccc--CCCceeccchhhcccCccHHHHHHHHHHHHHH
Confidence 652 1 111111111122222 1 111 0111 123488765 33455689998888877654
No 282
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.89 E-value=1.2e-07 Score=101.45 Aligned_cols=334 Identities=16% Similarity=0.252 Sum_probs=174.7
Q ss_pred cccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 247 YTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 247 ~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
..|..+|.+..+|.. +++++|++ .+++|..|+.++..+......+-..+ -|.. .++. +++...|+-..
T Consensus 68 D~Y~gdpSv~~Lee~----vael~G~E--~alpthqGRgaE~Il~~~~~~~~g~e---~g~~-~~~~--~v~hn~~fett 135 (467)
T TIGR02617 68 EAYSGSRSYYALAES----VKNIFGYQ--YTIPTHQGRGAEQIYIPVLIKKREQE---KGLD-RSKM--VAFSNYFFDTT 135 (467)
T ss_pred cccccCchHHHHHHH----HHHHhCCc--eEEECCCCchHHHHHHHhhccccccc---cccc-cccc--ccceEEEEecc
Confidence 347778988777665 67788987 47889889998877765543310000 0100 0010 12233333322
Q ss_pred H-HHHHcCCCCCCEEEEe----------cCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccc---cccCHHHHHH
Q psy1785 327 K-LAAFEGLGSDNVYLIK----------TDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLG---AFDPIPAIAD 392 (629)
Q Consensus 327 k-aa~~lGlg~~~v~~V~----------~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G---~idpl~ei~~ 392 (629)
. .+.+.|. .++.++ .+.+|.+|+++|+++|.+.-. ++.++.......++.-| +.+.+.++++
T Consensus 136 ~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~v~~tlt~N~~GGqpvslenlr~V~~ 211 (467)
T TIGR02617 136 QGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPYIVATITCNSAGGQPVSLANLKAVYE 211 (467)
T ss_pred hHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCceeeeeeEEEecCCCEEeCHHHHHHHHH
Confidence 2 3455665 444443 224699999999999976311 22333222222222234 4577888889
Q ss_pred HHHHcCCeEEE----ecC-ccccccc---ccccccccc-ccccccCCcceEEEeCCCCCCCCCCccEEEEEecc---chh
Q psy1785 393 ICAEYDMADSV----TWN-PHKLLTA---PQQCSVFLT-RRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQ---SVL 460 (629)
Q Consensus 393 i~~~~~~~lhV----A~g-g~~l~~~---~~~~~~~l~-~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~---~~l 460 (629)
+|++||+.+|+ -|+ +++.... -.+.++- + .+.+ ... +|+++++.-|-+++|.| |++..+++ +++
T Consensus 212 la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~-eI~rE~-~~~-aDsvt~slsKglgApvG-g~Lag~d~~~~~l~ 287 (467)
T TIGR02617 212 IAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIE-QITRET-YKY-ADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVY 287 (467)
T ss_pred HHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHH-HHHHHh-hcc-CCEEEEEcCCCCCCccc-ceEEecchhHHHHH
Confidence 99999999999 253 4321110 0111110 0 0010 244 99999999999999986 56666676 445
Q ss_pred hhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 461 TECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 461 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
+++......| .+...+|. -.+|-..+++. .|.-. --...+++-+...+||.++|.+. |+-++.
T Consensus 288 ~~~~~~~i~~--------EGf~tYGG---lagrd~ea~a~--Gl~e~---~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~ 350 (467)
T TIGR02617 288 TECRTLCVVQ--------EGFPTYGG---LEGGAMERLAV--GLYDG---MNLDWLAYRINQVQYLVNGLEEI-GVVCQQ 350 (467)
T ss_pred HHHHhhcccc--------cCCcCcCc---hhHHHHHHHHh--hhhhc---ccHHHHHHHHHHHHHHHHHHHhC-CCcEEe
Confidence 5442222111 11111221 12333333331 22211 11345677777889999999986 876653
Q ss_pred cCCCceEEEE----EeeCCCCCCCCchhhHHHHHhhHHHHHHH----HHHhcCcEEEeeeecCC-----ccceEEEeecC
Q psy1785 541 DEPECTNISF----WYIPPSLRGKEDQADFNELLHKVAPKIKE----RMMKSGSMMITYQPIHA-----LPNFFRLVLQN 607 (629)
Q Consensus 541 ~~p~~~~v~F----~~~p~~~~~~~~~~~~~~~l~~~~~~i~~----~l~~~G~~~i~~~~~~~-----~~~~lR~~~~n 607 (629)
.--. -+| ++.|. +.. .++.. ..++.+++. |-++.|.++.+..+-.+ ....+|+++--
T Consensus 351 -~Ggh--av~iDa~~~lph-ip~----~~fpa--~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipR 420 (467)
T TIGR02617 351 -AGGH--AAFVDAGKLLPH-IPA----DQFPA--HALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPR 420 (467)
T ss_pred -cCcc--EEEEehhhhCCC-CCh----hhCcH--HHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecccc
Confidence 2122 222 22221 111 11111 011122222 12223444333222111 12579999954
Q ss_pred CCCCHHHHHHHHHHHHHHhh
Q psy1785 608 SALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 608 ~~~t~edid~l~~~i~~l~~ 627 (629)
-.-|.++||++++.|..+.+
T Consensus 421 rvyt~~h~d~v~~~~~~~~~ 440 (467)
T TIGR02617 421 ATYTQTHMDFIIEAFKHVKE 440 (467)
T ss_pred ccccHhHHHHHHHHHHHHHh
Confidence 44699999999999988764
No 283
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.87 E-value=1.7e-06 Score=94.30 Aligned_cols=299 Identities=12% Similarity=0.097 Sum_probs=163.8
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHc-------
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFE------- 332 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~l------- 332 (629)
.++.++++++.+. ....|+.+|++||..|+..||.... +..+. .+..++...+..|-+...+..+.
T Consensus 85 ~~l~~~l~~~~~~--~~~~~~~sGseA~e~a~klar~~~~---~~~~~--~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~ 157 (403)
T PRK05093 85 LRLAKKLIDATFA--ERVFFANSGAEANEAAFKLARRYAC---DRHGP--EKTEIIAFHNSFHGRTLFTVSVGGQPKYSD 157 (403)
T ss_pred HHHHHHHHhhCCC--CEEEEeCchHHHHHHHHHHHHHHHh---hcCCC--CCCeEEEEcCCcCCchhhhHhhcCChhhhh
Confidence 3555667776654 4789999999999999999987532 11111 23456777888888766444432
Q ss_pred CCC--CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHcCCeEEE--e
Q psy1785 333 GLG--SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF----DPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 333 Glg--~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i----dpl~ei~~i~~~~~~~lhV--A 404 (629)
|++ ..+++.+|.+ |++.|++.+.+ .+.+|+..-.....|.+ +.+++|+++|++||+++++ +
T Consensus 158 ~~~~~~~~~~~~~~~-----d~~~l~~~l~~------~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv 226 (403)
T PRK05093 158 GFGPKPADITHVPFN-----DLAAVKAVIDD------HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEV 226 (403)
T ss_pred cCCCCCCCcEEeCCC-----CHHHHHHHhcC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 111 1234444432 78888887742 24445555333333444 3499999999999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
+.+...-..+. .....++ ..|..++ -|.++.-+..|.++.+++ +.+.. .. .. ..
T Consensus 227 ~~g~g~~g~~~------~~~~~~~--~pdi~s~--sK~l~~G~rig~vv~~~~-i~~~l-~~---~~-~~---------- 280 (403)
T PRK05093 227 QTGMGRTGDLF------AYMHYGV--TPDILTS--AKALGGGFPIGAMLTTAE-IASHF-KV---GT-HG---------- 280 (403)
T ss_pred hhCCCCCccch------hhhhcCC--CCCEEEe--cccccCCcceEEEEEcHH-HHhhc-CC---CC-CC----------
Confidence 66532111100 0001112 1465554 588875455888887653 33221 10 00 00
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCCCceE-EEEEeeCCCCCCCCc
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEPECTN-ISFWYIPPSLRGKED 562 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p~~~~-v~F~~~p~~~~~~~~ 562 (629)
.+. ++.+.....+..+|+.+-.. +..++..++.++|.+.|+++. .+-++...+..+. +.+.+.+..
T Consensus 281 --~t~-~~~~~~~~aa~a~L~~~~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~------ 348 (403)
T PRK05093 281 --STY-GGNPLACAVAEAVFDIINTP---EVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY------ 348 (403)
T ss_pred --CCC-CCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc------
Confidence 011 22222223333334443222 344566677888888887751 1112220122222 222221110
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.....++.++|.++|.++.. .+ .+++|++++ ...++++|+.+++.|+++..+
T Consensus 349 --------~~~~~~~~~~l~~~Gv~v~~----~g-~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~ 400 (403)
T PRK05093 349 --------KGRARDFLNAAAEEGVMVLV----AG-PDVLRFAPS-LVIEEADIDEGLARFEKAVAK 400 (403)
T ss_pred --------hhHHHHHHHHHHHCCeEEec----CC-CCEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Confidence 00123577888888854421 12 258999985 777999999999999887654
No 284
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.87 E-value=3.6e-06 Score=92.76 Aligned_cols=310 Identities=11% Similarity=0.083 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC--
Q psy1785 258 MEEHVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL-- 334 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl-- 334 (629)
.+.++.+.+++++.-+ .....|+.+||+|+..|++.||.. .| . ..++...+.-|-...-+..+.+-
T Consensus 98 ~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~-------tg---r-~~Ii~~~~~yHG~t~~~ls~t~~~~ 166 (441)
T PRK05769 98 PAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYH-------TG---R-KYIIAFLGAFHGRTYGSLSLTASKP 166 (441)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHH-------hC---C-CeEEEECCCcCCccHHHHHhcCCCc
Confidence 3455666677776421 146889999999999999999975 13 2 23455566667655444443221
Q ss_pred --------CCCCEEEEecCCCCC-----CCH--------HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHH
Q psy1785 335 --------GSDNVYLIKTDARGR-----MLP--------ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPA 389 (629)
Q Consensus 335 --------g~~~v~~V~~d~~g~-----~d~--------~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~e 389 (629)
....+..+|.....+ -|+ +.|++.+.+....+.....|+.---....|.+-| +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~ 246 (441)
T PRK05769 167 VQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKE 246 (441)
T ss_pred ccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHH
Confidence 122455565532111 112 2233322211011234445555544555678888 999
Q ss_pred HHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC
Q psy1785 390 IADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS 467 (629)
Q Consensus 390 i~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~ 467 (629)
++++|++||+.+++ .+.|...... +.....+++ . .|.++++ |.++..+..|.++.+++ ... ...
T Consensus 247 l~~l~~~~g~lli~DEv~tG~gr~G~------~~a~~~~gv-~-pDivt~~--K~l~~G~p~gav~~~~~-i~~-~~~-- 312 (441)
T PRK05769 247 LRKLADKYGILLIDDEVQTGMGRTGK------MFAIEHFGV-E-PDIITLA--KAIAGGLPLGAVIGRAE-LMF-LPP-- 312 (441)
T ss_pred HHHHHHHcCCEEEEechhhCCCcccc------eehhhccCC-C-CCEEEEc--ccccCCcccEEEEEehh-hhh-cCC--
Confidence 99999999999988 5444211111 000111133 2 5888865 77776566788887764 221 110
Q ss_pred CCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCc
Q psy1785 468 ASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPEC 545 (629)
Q Consensus 468 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~ 545 (629)
... .. |. .+.+........+|+.+.. +..++..++.++|++.|++.. .+.++.+ .-.-
T Consensus 313 -~~~------------~~--T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 372 (441)
T PRK05769 313 -GSH------------AN--TF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLG 372 (441)
T ss_pred -CCC------------CC--CC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecce
Confidence 000 00 11 2233334444455555533 456677778888888887641 1222220 0111
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..+.+.+..+. ... . .+....+.+.+.++|.++ .. .+ .+.+|++.. ...|++|||++++.+++.
T Consensus 373 ~~~~i~~~~~~--~~~-~-------~~~~~~~~~~~~~~Gil~-~~---~~-~~~lr~~p~-l~~t~~~id~~~~~l~~~ 436 (441)
T PRK05769 373 LMIGVELVKDR--KEP-D-------PKLRDKVLYEAFKRGLLL-LG---AG-KSAIRIIPP-LIITEEEADIGLEILEEA 436 (441)
T ss_pred EEEEEEeccCC--ccc-c-------HHHHHHHHHHHHhCCcEE-ec---CC-CCEEEEeCC-CCCCHHHHHHHHHHHHHH
Confidence 22333332211 000 0 112346778888999654 21 12 257999985 889999999999999887
Q ss_pred hhc
Q psy1785 626 GHD 628 (629)
Q Consensus 626 ~~~ 628 (629)
..+
T Consensus 437 l~~ 439 (441)
T PRK05769 437 IKE 439 (441)
T ss_pred HHH
Confidence 654
No 285
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.85 E-value=3.3e-06 Score=92.98 Aligned_cols=313 Identities=11% Similarity=0.068 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC---
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL--- 334 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl--- 334 (629)
.+.++.+.+++++.-......|+++||+||..|++.||... | .+.++...+.-|-+..-+..+.+-
T Consensus 87 ~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~s~~~~~~~ 155 (433)
T PRK08117 87 SILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVT-------K----RPYIISFTGCFHGRTLGALSVTTSKSK 155 (433)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhc-------C----CCeEEEECCCcCCcCHHHHhhcCCCcc
Confidence 34555566777762112467889999999999999998641 2 233566667778876655433221
Q ss_pred -----C--CCCEEEEecCCCCC------------CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHH
Q psy1785 335 -----G--SDNVYLIKTDARGR------------MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIA 391 (629)
Q Consensus 335 -----g--~~~v~~V~~d~~g~------------~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~ 391 (629)
+ ...+..+|.....+ -|+++|++.++.... +.....|+.---....|.+-| +++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~~~~l~~l~ 234 (433)
T PRK08117 156 YRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPPKSFLKKLR 234 (433)
T ss_pred ccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccC-CCcEEEEEECCeeCCCCCccCCHHHHHHHH
Confidence 0 12355565543221 145566666653211 223444544444455677878 99999
Q ss_pred HHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCC
Q psy1785 392 DICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 392 ~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
++|++||+.+.+ ++.|.......+ -...+++. .|.+ ..-|.++.-+..|.++.+++ +... +..
T Consensus 235 ~lc~~~g~llI~DEv~tG~gr~G~~~------~~~~~gv~--pDi~--t~sK~lg~G~pigav~~~~~-i~~~-~~~--- 299 (433)
T PRK08117 235 EICDRHGILLIFDEVQTGFGRTGEWF------AAQTFGVV--PDIM--TIAKGIASGLPLSAVVASKE-LMEQ-WPL--- 299 (433)
T ss_pred HHHHHcCCEEEEecchhccCccccch------hHhhcCCC--CCEe--ehhhhccCCCcceeEEEcHH-HHhh-ccC---
Confidence 999999999998 666532211100 00111221 4654 55788876566788887653 3322 110
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCCCce-E
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEPECT-N 547 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p~~~-~ 547 (629)
.. . . .|. .+.+......-.+++.+..++ +.++..++.+++++.|+++. .+.++.+-+..+ .
T Consensus 300 ~~-~----------~--~T~-~~np~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~ 362 (433)
T PRK08117 300 GS-H----------G--TTF-GGNPVACAAALATLEVIKEEK---LLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLM 362 (433)
T ss_pred CC-C----------C--CCC-CcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcE
Confidence 00 0 0 011 223333444445555543343 45556667788888777641 121121011121 1
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+.+.++. +.. +. .....+.+.+.++|.++... ....+++|+++. ..+|++|||++++.|+++.+
T Consensus 363 ~gi~~~~~~--~~~-~~-------~~~~~~~~~l~~~Gv~~~~~---g~~~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~ 428 (433)
T PRK08117 363 IGIEIVDPD--GEP-DG-------DAVEKILDKCLEKGLLFYLC---GNAGNVLRMIPP-LTVTKEEIDEGLDILDEALT 428 (433)
T ss_pred EEEEEecCC--CCc-ch-------HHHHHHHHHHHHCCCEEeec---CCCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHH
Confidence 223332221 100 00 12235678888999754321 112368999985 88999999999999988754
Q ss_pred c
Q psy1785 628 D 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 429 ~ 429 (433)
T PRK08117 429 E 429 (433)
T ss_pred H
Confidence 3
No 286
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.85 E-value=4.2e-06 Score=90.68 Aligned_cols=311 Identities=10% Similarity=0.047 Sum_probs=169.1
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|...+....+-+.+.+++.+..|++ .. +.++|+|++++...++.+.. .|...|++..-+....
T Consensus 64 Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~--------------~~gd~Vlv~~P~y~~~ 129 (388)
T PRK07366 64 YLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVL--------------NPGDFALLLDPGYPSH 129 (388)
T ss_pred CCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhC--------------CCCCEEEEcCCCCcch
Confidence 4333444455566666666666653 34 47778888887665544321 1333455555555667
Q ss_pred HHHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHcCCe
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI---PAIADICAEYDMA 400 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl---~ei~~i~~~~~~~ 400 (629)
...++..|. +++.||.+++ ..+|++++++.+.. .+.+|..+...+-+|.+-+. ++|.++|+++++|
T Consensus 130 ~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ 200 (388)
T PRK07366 130 AGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLA------QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLV 200 (388)
T ss_pred HHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhcc------cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeE
Confidence 778888998 9999999854 35788888776542 23455666678999988654 5566689999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
+.+ +|.-..+-.. ..+..++... -+...-.++.++-|.++.| +-+|.++. ++.++.........+
T Consensus 201 ii~De~Y~~~~~~~~-~~~~~~~~~~---~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li~~l~~~~~~~------- 268 (388)
T PRK07366 201 LVHDFPYVDLVFDGE-VEPPSILQAD---PEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLIQALRQVKAVV------- 268 (388)
T ss_pred EEEecchhhcccCCC-CCCCChhhCC---CCcccEEEEeecccccCCcchhheehcC-CHHHHHHHHHHHhhc-------
Confidence 988 6654332110 0000000100 0110124668999999755 44777664 444443321111000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~ 557 (629)
+. ++-......+...+.. ..+-+++..+...+..+++.+.|++. +++.. .|..+.+.+--.|+..
T Consensus 269 -----~~------~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~--~p~~g~f~~~~~~~~~ 333 (388)
T PRK07366 269 -----DF------NQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWPVP--LPEATMYVWAKLPEPW 333 (388)
T ss_pred -----cc------CCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc--CCCeeEEEEEECCccc
Confidence 00 0000000111111211 23445666666777788888999887 77543 3555444322122211
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHH-HhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERM-MKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l-~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.. + ..++.+.+ .+.|..+........ ..+++|++++ . ++++++..++.|.++
T Consensus 334 ~~--~-----------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~-~--~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 334 QG--N-----------SVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV-H--DPDILEEAVERIAAF 387 (388)
T ss_pred CC--C-----------HHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec-C--CHHHHHHHHHHHHHh
Confidence 00 0 02445555 456765444333221 1369999996 2 578888877777654
No 287
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.83 E-value=2e-06 Score=91.84 Aligned_cols=233 Identities=21% Similarity=0.215 Sum_probs=151.3
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH----HH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS----IK 326 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S----i~ 326 (629)
..|....+|+. ++.|=|- ..++.+++|..|+..++..-.. +...|+.+...... +.
T Consensus 61 ~nPT~~~lE~~----~a~LEg~--~~~~afsSGmaAI~~~~l~ll~--------------~GD~vl~~~~~YG~t~~~~~ 120 (396)
T COG0626 61 GNPTRDALEEA----LAELEGG--EDAFAFSSGMAAISTALLALLK--------------AGDHVLLPDDLYGGTYRLFE 120 (396)
T ss_pred CCccHHHHHHH----HHHhhCC--CcEEEecCcHHHHHHHHHHhcC--------------CCCEEEecCCccchHHHHHH
Confidence 35666566555 5555443 3577777776665554443222 22344444444322 33
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--e
Q psy1785 327 KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--T 404 (629)
Q Consensus 327 kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A 404 (629)
+...-.|+ ++..++. .|.+.+++++.+ ..+.+|-.-..+|.+.-+-||++|+++++++|+.+.| .
T Consensus 121 ~~l~~~gi---~~~~~d~-----~~~~~~~~~~~~-----~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNT 187 (396)
T COG0626 121 KILQKFGV---EVTFVDP-----GDDEALEAAIKE-----PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNT 187 (396)
T ss_pred HHHHhcCe---EEEEECC-----CChHHHHHHhcc-----cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECC
Confidence 34445676 7776653 333344444432 2467888899999999999999999999999977777 7
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|....+.-+ ++.|||+++=+.-|++++... .|+++.++..+.+..+.....+
T Consensus 188 fatP~~q~P--------------L~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~------------ 241 (396)
T COG0626 188 FATPVLQRP--------------LELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRAN------------ 241 (396)
T ss_pred cccccccCh--------------hhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhh------------
Confidence 877665433 566899999999999998755 5656656644333211100000
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC-----------------Cc
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP-----------------EC 545 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p-----------------~~ 545 (629)
.|--....-.|+.++ |..-+.-+++++.++|..+.+.|++.|.++-+. -| ..
T Consensus 242 --------~G~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~-yPgl~shp~he~~~rq~~g~g 310 (396)
T COG0626 242 --------TGAVLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVY-YPGLPSHPGHELAKRQMTGYG 310 (396)
T ss_pred --------cCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEE-CCCCCCCCcHHHHHHhcCCCc
Confidence 111235566788877 678888899999999999999999999987554 22 34
Q ss_pred eEEEEEee
Q psy1785 546 TNISFWYI 553 (629)
Q Consensus 546 ~~v~F~~~ 553 (629)
++++|.+.
T Consensus 311 g~~Sf~l~ 318 (396)
T COG0626 311 GLFSFELK 318 (396)
T ss_pred eEEEEEeC
Confidence 67888875
No 288
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.83 E-value=3.9e-06 Score=90.56 Aligned_cols=277 Identities=9% Similarity=0.049 Sum_probs=161.4
Q ss_pred CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCC-CCC
Q psy1785 272 FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDAR-GRM 350 (629)
Q Consensus 272 ~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~-g~~ 350 (629)
++..+.++|+|++++...++.+.... ....|++..-+......+++..|+ +++.++.+++ ..+
T Consensus 89 v~~~~I~it~Ga~~al~~~~~~~~~~-------------g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~ 152 (374)
T PRK02610 89 ITPANISVGNGSDELIRSLLIATCLG-------------GEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDPETFEI 152 (374)
T ss_pred CCHHHEEEcCChHHHHHHHHHHHcCC-------------CCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCcccCCC
Confidence 44467888999988865444432211 111355555666677788899999 9999998764 689
Q ss_pred CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH-cCCeEEE--ecCccccccccccccccccccccc
Q psy1785 351 LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE-YDMADSV--TWNPHKLLTAPQQCSVFLTRRNYV 427 (629)
Q Consensus 351 d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~-~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~ 427 (629)
|+++|++++.... ...+.+|+.+...+.+|.+-+.+++.++.+- +++|+.+ +|........ .+ ....
T Consensus 153 d~~~l~~~~~~~~--~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~---~~---~~~~-- 222 (374)
T PRK02610 153 DLAAAQSAIEQTQ--NPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL---VG---ELAQ-- 222 (374)
T ss_pred CHHHHHHHHHhhc--CCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch---HH---HHhc--
Confidence 9999999886421 1235566666788999999887777776532 3788888 6654321100 00 0000
Q ss_pred cCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHh
Q psy1785 428 IEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKA 506 (629)
Q Consensus 428 i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~ 506 (629)
... -.+..++-|.++.| +-+|.++. ++.+.+........+ + ...+...++..+
T Consensus 223 ~~~--~ivi~SfSK~~g~~GlRiG~~v~-~~~l~~~l~~~~~~~-----------------~------~~~~~q~a~~~~ 276 (374)
T PRK02610 223 HPN--WVILRTFSKAFRLAAHRVGYAIG-HPELIAVLEKVRLPY-----------------N------LPSFSQLAAQLA 276 (374)
T ss_pred CCC--EEEEEecchhccCcccceeeeec-CHHHHHHHHHhcCCC-----------------C------CCHHHHHHHHHH
Confidence 011 25678999999655 44777765 444444321111000 0 011222222233
Q ss_pred cCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEE-EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhc
Q psy1785 507 KGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNIS-FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKS 584 (629)
Q Consensus 507 ~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~-F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~ 584 (629)
++. +.+.+.+++..+..+.+.+.|++.+++++ . |.-+++. +++ |...+ ..++.++|.++
T Consensus 277 l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~--p~~g~f~~~~l-~~~~~---------------~~~~~~~l~~~ 337 (374)
T PRK02610 277 LEHRQELLAAIPEILQERDRLYQALQELPQLRV-W--PSAANFLYLRL-SQDAA---------------LAALHQALKAQ 337 (374)
T ss_pred hcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEe-C--CCcceEEEEeC-CCCCC---------------HHHHHHHHHHC
Confidence 322 34455555666667778888888878764 3 3333332 222 22110 12566778788
Q ss_pred CcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 585 GSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 585 G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
|..+ .. . .+++|++++ +.++++..++.|+++..+|
T Consensus 338 gi~v-~~----~-~~~lRls~~----~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 338 GTLV-RH----T-GGGLRITIG----TPEENQRTLERLQAALTQL 372 (374)
T ss_pred CEEE-Ee----C-CCeEEEeCC----CHHHHHHHHHHHHHHHhhc
Confidence 8643 21 1 258999986 2567899999998876653
No 289
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.83 E-value=3.9e-08 Score=107.87 Aligned_cols=259 Identities=16% Similarity=0.065 Sum_probs=171.9
Q ss_pred ccccCChhHHHHhhcccCCCCCCChhHHHHHHHHH-h-hcccccCCcccccccccccccCCCCHHHHHHhhcc------C
Q psy1785 119 VNEWVNPEELEKKLELGFNAGPSSHGKLIDLMKTV-I-QYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLEL------G 190 (629)
Q Consensus 119 V~~~~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~-l-~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~~------~ 190 (629)
+.....|-.-.......+|+.+.+.+++++++... + +....++||+++......+..+.+..+.+...++. .
T Consensus 16 ~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~ 95 (460)
T COG0076 16 SGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDE 95 (460)
T ss_pred CccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCccc
Confidence 33344444444555667899999999999999855 3 44556679999999999888777777777766643 2
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcC-----CCccccccChh--HHHHHHHHH
Q psy1785 191 FNAGPSSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALN-----PSVYTYEVSPV--FSLMEEHVL 263 (629)
Q Consensus 191 lp~~~~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n-----~~~~~~~~~p~--~~~~E~~~~ 263 (629)
.|.....|+++++++.+++.++ ..+.|++.+|.+...++|-+++...- ........-|. ..+--+-..
T Consensus 96 ~p~a~~~E~~~v~~l~~l~~~~-----~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~ 170 (460)
T COG0076 96 SPAAAELEERVVNMLSDLLGAP-----EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSF 170 (460)
T ss_pred ChhHHHHHHHHHHHHHHHhCCC-----CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHH
Confidence 3444457888999999999665 56779999999998888866654211 00111111220 111124456
Q ss_pred HHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEe
Q psy1785 264 AQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIK 343 (629)
Q Consensus 264 ~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~ 343 (629)
.+.++++|+........++ +..+...+.+.++.+....| .+|.+.+++
T Consensus 171 ~Kaa~~lG~~~~~v~~~~~----~~~id~~~l~~~i~~~t~~g------~vV~~aGtT---------------------- 218 (460)
T COG0076 171 EKAARYLGLGLRRVPTVPT----DYRIDVDALEEAIDENTIGG------VVVGTAGTT---------------------- 218 (460)
T ss_pred HHHHHHhCCCceeEEeccC----ccccCHHHHHHHHHhhccCc------eEEEEecCC----------------------
Confidence 7889999997644444443 34444444444443333222 466666666
Q ss_pred cCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccccc
Q psy1785 344 TDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 344 ~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~ 422 (629)
+.|.+|+= ++|.+.+++..+|+||++++|+...-..++... ..-+.....+|+.++|++...|..|+++|-
T Consensus 219 --~~G~iDdi---~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~---~~f~l~~vdSIt~d~HK~g~aP~~~G~il~ 289 (460)
T COG0076 219 --DTGSIDDI---EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR---WDFGLEGVDSITVDGHKYGLAPIGCGVVLF 289 (460)
T ss_pred --CCCccCCH---HHHHHHHHHcCCcEEEEccccceeecccCccch---hhcCCCCceEEEECcccccCCCCCceEEEE
Confidence 56776633 556666666789999999999988866555443 334556677889999999999999999763
No 290
>PRK06541 hypothetical protein; Provisional
Probab=98.82 E-value=6e-06 Score=91.39 Aligned_cols=327 Identities=14% Similarity=0.097 Sum_probs=170.0
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.++.+.+++++.-+-....|+.+||+|+..|++.||... +..|.++. ..+|...+.-|-...-+..+.|..
T Consensus 98 ~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~----~~~g~~~r-~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 172 (460)
T PRK06541 98 IELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYF----KLTGKPGK-HKVISRAIAYHGTTQGALAITGLPAFKA 172 (460)
T ss_pred HHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHH----HhcCCCCc-cEEEEEcCcccCcchhhhcCcCChhhcc
Confidence 344455666653222468999999999999999998742 11232112 334555666676554444332211
Q ss_pred -----CCCEEEEecCCCCC-----CCH--------HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 336 -----SDNVYLIKTDARGR-----MLP--------ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 336 -----~~~v~~V~~d~~g~-----~d~--------~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
...+..+|.....+ -++ +.|++.+... .......|+..--....|.+-| +++++++
T Consensus 173 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~l 250 (460)
T PRK06541 173 PFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREI 250 (460)
T ss_pred ccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 12344455432111 122 4455555421 1123444444444556688888 9999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCC-C
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASA-S 469 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~-~ 469 (629)
|++||+.+++ .+-|.-.....+ -..+.++ . .|.++ .-|.++.-+ ..|.++++++ ..... .... .
T Consensus 251 c~~~g~llI~DEV~tGfGR~G~~~------a~~~~gv-~-PDivt--~gK~l~~G~~pigav~~~~~-i~~~~-~~~~~~ 318 (460)
T PRK06541 251 CDRYDVLLVSDEVICAFGRLGEMF------GCERFGY-V-PDIIT--CAKGITSGYSPLGAMIASDR-LFEPF-LDGPTM 318 (460)
T ss_pred HHHcCCEEEEechhhCCCcCchhh------hhhhcCC-C-CCEEE--ecccccCCccceeEEEEcHH-HHHHh-hcCCCc
Confidence 9999999988 543321221100 0111233 2 68877 478887533 4688888764 33221 1110 0
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEE
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNI 548 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v 548 (629)
++.. . | ..+.+..+......++.+..++ ..++..++.++|.+.|+++..+.++.+ ...-..+
T Consensus 319 ~~~~-----------~--T-~~gnp~~~aaala~l~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~ 381 (460)
T PRK06541 319 FLHG-----------Y--T-FGGHPVSAAVALANLDIFEREG---LLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFY 381 (460)
T ss_pred cccC-----------C--C-CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEE
Confidence 1100 0 0 1222333444444555554444 346677788899988887633222210 1122223
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.+..+......-...... ......+.+.|.++|.++ ...+ .+ .+.||++.. ..+|++|||.+++.+++..++
T Consensus 382 ~ie~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gi~~-~~~~-~g-~~~lrl~Pp-l~~t~~~id~~~~~l~~~l~~ 455 (460)
T PRK06541 382 GIELVKDKATKETFTDDESE--RLLRGFLSPALFEAGLYC-RADD-RG-DPVVQLAPP-LISGQEEFDEIEQILRSVLTE 455 (460)
T ss_pred EEEEecCcccccCCcchhhh--hhHHHHHHHHHHhCCeEE-EecC-CC-CCEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence 33332111000000000000 001135678888999653 3221 22 258999985 789999999999999887643
No 291
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.82 E-value=5.8e-06 Score=92.36 Aligned_cols=325 Identities=14% Similarity=0.083 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHhCC-CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC--
Q psy1785 259 EEHVLAQMRTIVGF-QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG-- 335 (629)
Q Consensus 259 E~~~~~~l~~l~G~-~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg-- 335 (629)
+.++.+.+.+++.- +-....|+++||+||..|+..||... ...|.++ ...+|...+.-|-+..-+..+.|..
T Consensus 135 ~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e~AlKlAr~~~----~~~g~~~-r~~iI~~~~~yHG~t~~a~slsg~~~~ 209 (504)
T PLN02760 135 SLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYYN----NALGRPN-KKKFIARSKSYHGSTLISASLSGLPAL 209 (504)
T ss_pred HHHHHHHHHhhcCCCCCCEEEEeCChHHHHHHHHHHHHHHH----HhcCCCC-CcEEEEECCCccCChHhhhhccCChhh
Confidence 34444556666432 22457889999999999999998642 1123222 2346677788898876665544421
Q ss_pred -------CCCEEEEecCCCCC-------------CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHH
Q psy1785 336 -------SDNVYLIKTDARGR-------------MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIA 391 (629)
Q Consensus 336 -------~~~v~~V~~d~~g~-------------~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~ 391 (629)
...+..++.....+ ...++|++.|.+ +.......|++---....|.+-| +++++
T Consensus 210 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr 287 (504)
T PLN02760 210 HQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILK--EGPETIAAFIAEPVMGAGGVIPPPATYFEKIQ 287 (504)
T ss_pred ccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHh--cCCCceEEEEECCccCCCCCcCCCHHHHHHHH
Confidence 11233444321111 012346665542 11123334444434445578888 99999
Q ss_pred HHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCC
Q psy1785 392 DICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASA 468 (629)
Q Consensus 392 ~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~ 468 (629)
++|++||+.+++ ..-|.-....-+ -...+|+. .|.+++ -|.++.-+ +.|.+++++ ++.. .+....
T Consensus 288 ~lc~~~g~lLI~DEV~TGfGRtG~~~------a~e~~gv~--PDivtl--gK~lggG~~PigAv~~~~-~i~d-~~~~~~ 355 (504)
T PLN02760 288 AVLKKYDILFIADEVICAFGRLGTMF------GCDKYNIK--PDLVSL--AKALSSAYMPIGAVLVSP-EISD-VIHSQS 355 (504)
T ss_pred HHHHHcCCEEEecchhhCCcccchhh------HHHhcCCC--CcEEEe--cccccCCccccceEeecH-HHHh-hhhccc
Confidence 999999999999 443332222100 01112342 687776 58886532 356677765 3332 221100
Q ss_pred CccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceE
Q psy1785 469 SYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTN 547 (629)
Q Consensus 469 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~ 547 (629)
... . ...... | -.+.+..+...-.+|+.+-.++ ++++..++.++|++.|++.....++.+ .-.-..
T Consensus 356 ~~~---~----~~~h~~--T-~~gnPl~~Aaala~Le~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~ 422 (504)
T PLN02760 356 NKL---G----SFAHGF--T-YSGHPVSCAVALEALKIYKERN---IPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLI 422 (504)
T ss_pred ccc---c----CcccCC--C-CCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceE
Confidence 000 0 000001 1 1223334444445566554443 466777788888888876522222210 011123
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+.+..+..... . +.. ...+...+.+.+.++|.++.. .+ +.+|++.. ..+|++|||.+++.+++...
T Consensus 423 ~gie~~~~~~~~~--~--~~~-~~~~~~~i~~~~~~~Gvl~~~----~g--~~lrl~Pp-l~it~eeid~~~~~l~~al~ 490 (504)
T PLN02760 423 LGTEFVDNKSPND--P--FPA-EWGVGAYFGAECKKRGMLVRV----AG--DNIMMSPP-LIITPEEVDELISIYGKALK 490 (504)
T ss_pred EEEEEecCCcccc--c--ccc-hhHHHHHHHHHHHhCCcEEEe----cC--CEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 3443322110000 0 000 012234678889999965422 12 46898885 77999999999999987654
No 292
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.82 E-value=2.5e-06 Score=91.99 Aligned_cols=273 Identities=16% Similarity=0.135 Sum_probs=149.3
Q ss_pred CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCC------CEEEEecCCCCC
Q psy1785 276 DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSD------NVYLIKTDARGR 349 (629)
Q Consensus 276 ~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~------~v~~V~~d~~g~ 349 (629)
-..|+++||++|..|+..+|... | ...+|......|-+...++...|.... .+..++.. -.
T Consensus 86 ~~~~~~SGseA~~~Al~~ar~~~-------~----~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 152 (375)
T PRK04260 86 LAFFCNSGAEANEAAIKIARKAT-------G----KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--IF 152 (375)
T ss_pred EEEEcCccHHHHHHHHHHHHHhc-------C----CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--CC
Confidence 36899999999999999998641 1 234566678889887766655432000 01011100 12
Q ss_pred CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--ecCccccccccccccccccc
Q psy1785 350 MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 350 ~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~ 423 (629)
.|+++|++.+.+ ....|+.....+..|.+-| +.++.++|+++|+++++ ++.+...-..+. ..
T Consensus 153 ~dl~~l~~~l~~------~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~------~~ 220 (375)
T PRK04260 153 NDLNSVKALVNK------NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY------AF 220 (375)
T ss_pred CCHHHHHHhcCC------CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh------hh
Confidence 478888887742 2334555544455566644 89999999999999999 654421111100 00
Q ss_pred cccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHH
Q psy1785 424 RNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFM 503 (629)
Q Consensus 424 ~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~ 503 (629)
...++ . -|.+ ...|.++.-+..|.++.+++ ... .+.. ..+. . +. .+.+.....+..+
T Consensus 221 ~~~~~-~-pdi~--t~sK~l~~G~~ig~~~~~~~-~~~-~~~~-~~~~-------------~--t~-~~~~~~~~aa~a~ 277 (375)
T PRK04260 221 EHYGI-E-PDIF--TLAKGLANGVPVGAMLAKSS-LGG-AFGY-GSHG-------------S--TF-GGNKLSMAAASAT 277 (375)
T ss_pred HhhCC-C-CCEE--EecccccCCcceEEEEEcHH-HHh-hcCC-CCCC-------------C--CC-CcCHHHHHHHHHH
Confidence 00122 2 4655 46898875456788888753 222 1110 0000 0 11 1222333444444
Q ss_pred HHhcChhhHHHHHHHHHHHHHHHHHHHhc----CCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHH
Q psy1785 504 WKAKGTDGLEAHIDKSFDNAKYFTDKIRH----RPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKE 579 (629)
Q Consensus 504 l~~~G~~G~~~~~~~~~~la~~l~~~L~~----~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~ 579 (629)
++.+..++ +.++..+..+++++.+.+ .+.+.-+. .....+.+.+. .. ..++.+
T Consensus 278 l~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~g~~~~~~~~-~~-----------------~~~~~~ 334 (375)
T PRK04260 278 LDIMLTAG---FLEQALENGNYLQEQLQKALQDKETVTTVR--GLGYMIGIETT-AD-----------------LSQLVE 334 (375)
T ss_pred HHHHHhhH---HHHHHHHHHHHHHHHHHHHHhhCCCeeEEe--ccceEEEEEec-Cc-----------------HHHHHH
Confidence 54443333 334444455555555543 32222221 11222222221 00 135778
Q ss_pred HHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 580 RMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 580 ~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
++.++|..+.. .+ .+.+|+++. ...+++||+++++.|+++
T Consensus 335 ~l~~~Gi~v~~----~~-~~~lR~~~~-~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 335 AARDKGLIVLT----AG-TNVIRLLPP-LTLTKEEIEQGIAILSEV 374 (375)
T ss_pred HHHhCCCEEec----CC-CCEEEEcCC-CccCHHHHHHHHHHHHHh
Confidence 88899975422 12 257999995 888999999999999875
No 293
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.81 E-value=2.1e-06 Score=90.54 Aligned_cols=292 Identities=16% Similarity=0.181 Sum_probs=167.2
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHc-------
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFE------- 332 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~l------- 332 (629)
.+..++++++.+ ......|+++|||||..|++.||.... +. ...-+|.+...-|-...-+...-
T Consensus 87 ~~la~~L~~~s~-~~d~vff~NSGaEA~EaAiKlARk~~~------~~--~k~~Iia~~nsFHGRT~galS~t~~~ky~~ 157 (404)
T COG4992 87 AELAEKLVELSP-FADRVFFCNSGAEANEAALKLARKYTG------DP--EKSKIIAFENSFHGRTLGALSATGQPKYRK 157 (404)
T ss_pred HHHHHHHHhhCc-cccEEEEcCCcHHHHHHHHHHHHHHcC------CC--CCcEEEEEcCCcCCccceeeeccCChhhcc
Confidence 344556777776 346789999999999999999998753 10 01223444444453211111110
Q ss_pred CC--CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--e
Q psy1785 333 GL--GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 333 Gl--g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A 404 (629)
++ -...+..||. -|+++|+++|.+. +..|+.---.-..|.+-| +++++++|++||+.+++ .
T Consensus 158 ~F~Pl~~g~~~vpf-----nDi~al~~ai~~~------taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEV 226 (404)
T COG4992 158 GFGPLLPGFRHVPF-----NDIEALEAAIDED------TAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEV 226 (404)
T ss_pred CCCCCCCCceecCC-----CCHHHHHHHhccC------eEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEecc
Confidence 11 1225666664 4789999999873 334554443444454433 78999999999999877 2
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
--|.---.. ++-+.+.|++ -|+++.- |.|+.-++.|.++.++ .... .+. .
T Consensus 227 QtG~GRTGk------~fA~e~~gV~--PDI~tla--K~LgGG~PigA~la~~-~~~~-~~~------------------~ 276 (404)
T COG4992 227 QTGLGRTGK------LFAYEHYGVE--PDILTLA--KALGGGFPIGAMLATE-EIAS-AFT------------------P 276 (404)
T ss_pred ccCCCccch------HHHHHHhCCC--CCEEEee--ccccCCccceeeEEch-hhhh-cCC------------------C
Confidence 111110000 1122222343 4777764 8887778889999983 2221 111 1
Q ss_pred CCc-cCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCC--CceEEEEEeeCCCCCCC
Q psy1785 485 GDK-HIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEP--ECTNISFWYIPPSLRGK 560 (629)
Q Consensus 485 ~~~-~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p--~~~~v~F~~~p~~~~~~ 560 (629)
|++ +--+|.+......-.+++.+-.+++ +++..++..+|.++|+++. .+.++. +. .--.+-..+.++.
T Consensus 277 G~HgSTfGGNpLacAv~~a~l~~l~~e~l---l~~v~~~g~~~~~~L~~l~~~~~~v~-~vRG~GLmiGiel~~~~---- 348 (404)
T COG4992 277 GDHGSTFGGNPLACAVALAVLEVLLEEGL---LENVREKGEYLLQRLRELKRRYPLVK-EVRGRGLMIGIELKEPY---- 348 (404)
T ss_pred CcccCCCCcCHHHHHHHHHHHHHHcchhH---HHHHHHHHHHHHHHHHHHhhcCCcee-eeecceeEEEEEecCcc----
Confidence 111 0113334333333445566656654 4556668888888888752 222232 21 1111222222110
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+..+.+.+.++|.+.+.. + .+++|+..- ...+++|||..++.+++..+
T Consensus 349 ------------~a~~~~~~~~~~gvL~~~a----~-~~ViR~~Pp-L~i~~eei~~~~~~l~~~l~ 397 (404)
T COG4992 349 ------------RARDIVRALREEGVLVLPA----G-PNVIRFLPP-LVITEEEIDEALDALERALA 397 (404)
T ss_pred ------------cHHHHHHHHHHCCeEEecC----C-CCeEEecCC-ccCCHHHHHHHHHHHHHHHH
Confidence 1246788899999654332 2 368999995 78999999999999988765
No 294
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=98.80 E-value=8.2e-06 Score=84.78 Aligned_cols=302 Identities=13% Similarity=0.117 Sum_probs=174.2
Q ss_pred HHHHHHHHHHhCCCC--CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCC
Q psy1785 260 EHVLAQMRTIVGFQG--GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSD 337 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~--~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~ 337 (629)
..+..|..+-.++.. ...+|++|-.-+.-.++..-. .|...|++..-..+.+.++.+..|=
T Consensus 67 ~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T--------------~~gd~Vvi~tPvY~PF~~~i~~n~R--- 129 (388)
T COG1168 67 AAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT--------------KPGDGVVIQTPVYPPFYNAIKLNGR--- 129 (388)
T ss_pred HHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC--------------cCCCeeEecCCCchHHHHHHhhcCc---
Confidence 555666776666654 456676655444333332211 2333455555666778888887776
Q ss_pred CEEEEecC-CCC--CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCCeEEE--ecCccc
Q psy1785 338 NVYLIKTD-ARG--RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDMADSV--TWNPHK 409 (629)
Q Consensus 338 ~v~~V~~d-~~g--~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~~lhV--A~gg~~ 409 (629)
+++..|.- ++| .||.++||+++.+. ...+.+....-+.+|.+ |.|.+|+++|++||+.++. -|....
T Consensus 130 ~~i~~pL~~~~~~y~iD~~~LE~~~~~~-----~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv 204 (388)
T COG1168 130 KVIENPLVEDDGRYEIDFDALEKAFVDE-----RVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLV 204 (388)
T ss_pred EEEeccccccCCcEEecHHHHHHHHhcC-----CccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccccc
Confidence 78888764 344 67999999998762 23455666777888877 7899999999999998876 233222
Q ss_pred cccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCcc
Q psy1785 410 LLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKH 488 (629)
Q Consensus 410 l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 488 (629)
+.... -.+ +..... .... --..+.++.|.+..+ +.|+.++..++.+..+. ..+ +....
T Consensus 205 ~~g~~-h~~-~a~ls~-~~a~-~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~-~~~---l~~~~------------- 263 (388)
T COG1168 205 LGGHK-HIP-FASLSE-RFAD-NSITLTSASKTFNLAGLKCAYIIISNRELRAKF-LKR---LKRNG------------- 263 (388)
T ss_pred ccCCC-ccc-hhhcCh-hhhc-ceEEEeeccccccchhhhheeEEecCHHHHHHH-HHH---HHHhc-------------
Confidence 22110 000 000000 1111 234556679988765 66888888776543321 111 11000
Q ss_pred CCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc-CCCcEEEccCCCceEEEEEe--eCCCCCCCCchhh
Q psy1785 489 IQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH-RPGFKLVLDEPECTNISFWY--IPPSLRGKEDQAD 565 (629)
Q Consensus 489 ~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~-~~g~~l~~~~p~~~~v~F~~--~p~~~~~~~~~~~ 565 (629)
+.+-..-++-++.+.-..|.+-+.++.+...++.+++++.+.+ +|++++.. |+.+=. .|+ .+-++.
T Consensus 264 -~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~--p~gTYL-~WLD~r~l~l~------- 332 (388)
T COG1168 264 -LHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTE--PQGTYL-AWLDCRELGLD------- 332 (388)
T ss_pred -CCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec--CCCcee-eeeeccccCCC-------
Confidence 0111111233333333458888999999999999999999987 58999874 554322 232 221111
Q ss_pred HHHHHhhHHHHHHHHHHhcCcEEEeeeec-C-CccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 566 FNELLHKVAPKIKERMMKSGSMMITYQPI-H-ALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 566 ~~~~l~~~~~~i~~~l~~~G~~~i~~~~~-~-~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..++++.|.++..+.++.... . +..+|+|+.+ .++++-++..++.|.+..
T Consensus 333 --------d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~---acpr~~L~eal~ri~~al 384 (388)
T COG1168 333 --------DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNF---ACPRAILEEALERLKRAL 384 (388)
T ss_pred --------hHHHHHHHHHhhcEeccCCCccCcCCCceEEEec---CCCHHHHHHHHHHHHHHH
Confidence 025677777777665553222 1 2236999766 456666666655555443
No 295
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=98.79 E-value=3e-06 Score=90.04 Aligned_cols=272 Identities=10% Similarity=0.103 Sum_probs=163.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.++.+++++.+|++..+.++|+|++++....+.. . +...|++..-++..+..+++..|+ ++
T Consensus 58 ~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~-~---------------~gd~V~v~~P~y~~~~~~~~~~g~---~~ 118 (337)
T PRK03967 58 DPLREAIAEFYGLDAENIAVGNGSDELISYLVKL-F---------------EGKHIVITPPTFGMYSFYAKLNGI---PV 118 (337)
T ss_pred HHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHH-h---------------CCCeEEEeCCChHHHHHHHHHcCC---eE
Confidence 4556678888888888899999999876433221 1 122355565666666677888998 99
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
+.|+.++++.+|++.|++.+. .+..++.+...+.+|.+-+.+++.++++ +++++++ +|.... ..+ .
T Consensus 119 ~~v~~~~~~~~d~~~l~~~~~-------~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~--~~~--~ 186 (337)
T PRK03967 119 IDVPLKEDFTIDGERIAEKAK-------NASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFS--GKS--L 186 (337)
T ss_pred EEeecCCCCCcCHHHHHHhcc-------CCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhc--ccc--h
Confidence 999998888999999887532 1234556788999999999999999995 6999888 665432 110 0
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcc
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD 496 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 496 (629)
...+.. .+. -.+..++-|.++.| .-+|.++.. +............ ++ . .
T Consensus 187 ~~~~~~----~~~--vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~~-----------------~~--~----~ 236 (337)
T PRK03967 187 IGLIDE----YPN--LILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKPP-----------------FS--L----N 236 (337)
T ss_pred HHHHhh----CCC--EEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcCC-----------------CC--C----C
Confidence 000010 112 25678999999855 557887764 3444332111100 00 1 1
Q ss_pred hHHHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 497 VLKFWFMWKAKG-TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 497 al~~w~~l~~~G-~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
.+...++...+. .+-+.+..++..+..+.+.+.|.+. .. |.-.+. +|.. +
T Consensus 237 ~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~--~~~~~~-~~~~----------------~----- 287 (337)
T PRK03967 237 ILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AY--PSDANF-LLLK----------------L----- 287 (337)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cC--CCCCcE-EEEh----------------H-----
Confidence 222222222222 2334445555566667777777653 12 222222 2221 1
Q ss_pred HHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 576 KIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+.+.|.++|..+ .... ....+++|+++. +.++.+.++++|+++..
T Consensus 288 ~~~~~l~~~gi~v-~~~~-~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 DAYDYLLENGIVV-RKLS-GRLEGHIRVTVG----KREENDEFIKALKEIKE 333 (337)
T ss_pred HHHHHHHHCCEEE-EeCC-CCCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 1456777888543 3222 122468999986 67888899999887754
No 296
>PRK06062 hypothetical protein; Provisional
Probab=98.78 E-value=1.5e-05 Score=88.09 Aligned_cols=316 Identities=12% Similarity=0.056 Sum_probs=165.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.++.+.+++++.-+-....|+.+||+|+..|++.||... | . ..+|...+.-|-...-+....+..
T Consensus 98 ~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t-------g---r-~~ii~~~~~yHG~t~~als~~~~~~~~~ 166 (451)
T PRK06062 98 SEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHT-------G---R-PKVLSAYRSYHGGTGSAINLTGDPRRWP 166 (451)
T ss_pred HHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhh-------C---C-ceEEEEeCCCCCCCHHHHhhcCCccccc
Confidence 445556666664222468999999999999999998751 2 2 234555566676554444433310
Q ss_pred ----CCCEEEEecCCCCC------CC-------HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHH
Q psy1785 336 ----SDNVYLIKTDARGR------ML-------PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADIC 394 (629)
Q Consensus 336 ----~~~v~~V~~d~~g~------~d-------~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~ 394 (629)
...+..++.....+ .| +++|++.|+. ........|+.---....|.+-| +++++++|
T Consensus 167 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~--~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc 244 (451)
T PRK06062 167 NDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIEL--EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELC 244 (451)
T ss_pred CCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHH
Confidence 11233443322111 12 5666776643 11123344444444455678888 99999999
Q ss_pred HHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCcc
Q psy1785 395 AEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYL 471 (629)
Q Consensus 395 ~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl 471 (629)
++||+.+++ ...|.-.... ..-..++|+ . .|.+++ -|.++.-+ ..|.++.++ ++.. .+.. ..+.
T Consensus 245 ~~~g~lLI~DEV~tGfGRtG~------~~a~~~~gv-~-PDi~t~--gK~lggG~~Pigav~~~~-~i~~-~~~~-~~~~ 311 (451)
T PRK06062 245 DRHGIVLIADEVMAGFGRTGK------WFAIEHFGV-V-PDLITF--AKGVNSGYVPLGGVAISE-AIAA-TFAD-RPYP 311 (451)
T ss_pred HHcCCEEEeeccccCCCcCcH------HHHHHhcCC-C-CCeeee--chhhhcCCcCcEEEEEcH-HHHH-Hhcc-CCCC
Confidence 999999998 4444211111 001112244 3 687776 68887643 478888877 3433 2211 0111
Q ss_pred ccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHH-HHHHHHHhcCC-CcEEEcc-CCCceEE
Q psy1785 472 FQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNA-KYFTDKIRHRP-GFKLVLD-EPECTNI 548 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la-~~l~~~L~~~~-g~~l~~~-~p~~~~v 548 (629)
. .. | -.+.+........+|+.+-.+++ +++..++. ++|++.|+++. .+.++.+ .-.-..+
T Consensus 312 -~----------~~--T-~~gnpl~~Aaa~a~L~~l~~~~l---~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~ 374 (451)
T PRK06062 312 -G----------GL--T-YSGHPLACAAAVATINAMEEEGI---VENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFW 374 (451)
T ss_pred -C----------CC--C-CCCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEE
Confidence 0 00 1 12333344444555666555544 44444554 45655555431 1111110 0111123
Q ss_pred EEEeeCCCC-CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 549 SFWYIPPSL-RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 549 ~F~~~p~~~-~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+.+..+.. +...+..... ......+.+.|.++|.++ . + .+ +.+|++.. ..+|++|||.+++.+++..+
T Consensus 375 gve~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~Gvl~-~--~-~~--~~lrl~pp-l~~t~~eid~~~~~l~~~l~ 444 (451)
T PRK06062 375 ALELVADRETREPLAPYGAS---SAAMAAVKAACKERGLLP-F--V-NG--NRIHVVPP-CTVTEDEVREGLAILDAALA 444 (451)
T ss_pred EEEEcccccccCCCcccchh---hHHHHHHHHHHHHCCcEE-e--e-cC--CEEEEECC-ccCCHHHHHHHHHHHHHHHH
Confidence 333321110 0000000000 122356788899999653 2 1 12 47999884 68899999999999988765
Q ss_pred c
Q psy1785 628 D 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 445 ~ 445 (451)
T PRK06062 445 V 445 (451)
T ss_pred H
Confidence 4
No 297
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=98.78 E-value=1.2e-05 Score=88.49 Aligned_cols=310 Identities=16% Similarity=0.071 Sum_probs=167.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.+..+.++++++.......|+.+||+|+..|++.||... | . +.++...+.-|-...-+..+.|+.
T Consensus 87 ~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~t-------g---r-~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 155 (443)
T PRK08360 87 LLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYT-------K---R-RKILSYLRSYYGSTYGAMSLTGLDFPVR 155 (443)
T ss_pred HHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhc-------C---C-CeEEEEeCCcCCcCHHHHHhcCCCcccc
Confidence 455566777765433468999999999999999998751 2 2 234444555666544444433321
Q ss_pred -----CCCEEEEecCCCCCC------------CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHH
Q psy1785 336 -----SDNVYLIKTDARGRM------------LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADIC 394 (629)
Q Consensus 336 -----~~~v~~V~~d~~g~~------------d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~ 394 (629)
...+..+|.....++ +++.+++.++... .+.....|++.-..+..|.+-| ++++.++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~ 234 (443)
T PRK08360 156 ALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKIL 234 (443)
T ss_pred cCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 124566665432111 2233444443311 1234445555433345566655 89999999
Q ss_pred HHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccc
Q psy1785 395 AEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLF 472 (629)
Q Consensus 395 ~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~ 472 (629)
++||+++.+ ++.+........ -....++. -|.+++ -|.++.-+..|.++.+. +.... +.. ..+.
T Consensus 235 ~~~g~llI~DEv~~g~gr~G~~~------a~~~~~~~--pDiitl--sK~l~~G~pigav~~~~-~i~~~-~~~-~~~~- 300 (443)
T PRK08360 235 DEHGILLVVDEVQSGLGRTGKWF------AIEHFGVE--PDIITL--GKPLGGGLPISATIGRA-EIMDS-LPP-LAHA- 300 (443)
T ss_pred HHcCCEEEEeccccCCCcCccch------hhhhcCCC--CCEEEe--cccccCCceeEEEEEcH-HHHhh-hcC-CCCC-
Confidence 999999988 655532211100 00011232 577766 89988655678888765 33322 110 0000
Q ss_pred cCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEEEE
Q psy1785 473 QKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNISF 550 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v~F 550 (629)
.+ .++.+........+++.+..++ ..++..++.++|++.|++.. .+.++.+ ...-..+.+
T Consensus 301 --------------~T-~~~~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gi 362 (443)
T PRK08360 301 --------------FT-LSGNPVASAAALAVIEEIEEKN---LLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGV 362 (443)
T ss_pred --------------CC-CCcCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEE
Confidence 01 1222333444445555554443 45666667777777776531 1222220 122233334
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+..+... .. . + ...+..+.++|.++|.++ .. .. .+.+|+++. ..+|++|||.+++.+++..+
T Consensus 363 e~~~~~~~-~~-~-~-----~~~~~~~~~~l~~~Gi~~-~~--~~--~~~lr~~P~-l~~t~~~id~~~~~l~~~l~ 425 (443)
T PRK08360 363 DLVKDRET-KE-R-A-----YEEAAKVVWRAWELGLIV-TF--FS--GNVLRIQPP-LTIEKEVLDEGLDILEEAIE 425 (443)
T ss_pred EEecCCcc-cC-c-c-----HHHHHHHHHHHHHCCeEE-ee--cC--CCEEEEeCC-CCCCHHHHHHHHHHHHHHHH
Confidence 43321100 00 0 0 112346778899999643 21 12 258999995 89999999999999988754
No 298
>PRK12403 putative aminotransferase; Provisional
Probab=98.78 E-value=2.2e-05 Score=87.02 Aligned_cols=322 Identities=14% Similarity=0.116 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC--
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG-- 335 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg-- 335 (629)
...++.++++++++-.-....|+++||+||..|++.||... ...|.+. ...++.....-|-+..-+..+.|..
T Consensus 99 ~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~----~~~g~~~-r~~ii~~~~~yHG~t~~~~s~s~~~~~ 173 (460)
T PRK12403 99 AVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYW----QVLGKPQ-KKIMIGRWNGYHGSTLAATALGGMKFM 173 (460)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HhhCCCC-CcEEEEECCCcCcccHhhhhcCCCccc
Confidence 34555666777775333468999999999999999998642 1113110 1223333455687766555544321
Q ss_pred ------CCCEEEEecCCCC----CC--------CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 336 ------SDNVYLIKTDARG----RM--------LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 336 ------~~~v~~V~~d~~g----~~--------d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
...+..+|..... .+ +.++|++.+.+. .......|+.---....|.+-| +++++++
T Consensus 174 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~l 251 (460)
T PRK12403 174 HEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILEL--GAENVAGFVAEPFQGAGGMIFPPESYWPEIQRI 251 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHh--CCCceEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 1124445422110 11 124455555321 1123334555444555577777 9999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCC-CC
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSAS-AS 469 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~-~~ 469 (629)
|++||+.+++ ...|.--... .+-..++|++ .|.++ .-|.++.-+ .+|.++++++ ..+. +... ..
T Consensus 252 c~~~g~lLI~DEV~tGfGRtG~------~~a~e~~gv~--PDiv~--~gK~lggG~~Piga~v~~~~-i~~~-~~~~~~~ 319 (460)
T PRK12403 252 CRQYDVLLCADEVIGGFGRTGE------WFAHEHFGFE--PDTLS--IAKGLTSGYVPMGGLVLSKR-IAEA-LVEQGGV 319 (460)
T ss_pred HHHcCCEEEEeccccCCCcCch------hhhhhhcCCC--CCeEE--EcccccccccceEEEEECHH-HHHH-HhcCCCc
Confidence 9999999999 5544322111 0011122443 58887 478887543 5677777653 3322 2111 01
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHH-HHHHHHHHHHhcC-CCcEEEcc-CCCce
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSF-DNAKYFTDKIRHR-PGFKLVLD-EPECT 546 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~-~la~~l~~~L~~~-~g~~l~~~-~p~~~ 546 (629)
|+.. . | -.+.+..+.....+|+.+-.+++ .++.. ++.++|++.|++. ....++.+ .-.-.
T Consensus 320 ~~~~-----------~--T-~~gnPl~~Aaala~L~~i~~~~l---~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 382 (460)
T PRK12403 320 FAHG-----------L--T-YSGHPVAAAVAIANLKALRDEGV---VTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGL 382 (460)
T ss_pred cccC-----------C--C-CCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecce
Confidence 1110 0 1 12333344455556666655554 44443 5666666666542 11222220 01112
Q ss_pred EEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 547 NISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 547 ~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.+.+.+..+.......... ..+...+.+.+.++|.++.. .+ +.+|++.. ...|++|||.+++.+++..
T Consensus 383 ~~gie~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Gll~~~----~~--~~~~l~Pp-l~it~~eid~~~~~l~~al 450 (460)
T PRK12403 383 VAALQFAEDKATRKRFANE-----NDLAWRCRTIGFEEGVIIRS----TL--GRMIMAPA-LVAGRAEIDELVDKTRIAV 450 (460)
T ss_pred EEEEEEccCccccccccch-----hHHHHHHHHHHHhCCEEEEe----cC--CEEEEECC-CCCCHHHHHHHHHHHHHHH
Confidence 2334433211110000000 11233567788899965421 12 35787774 5679999999999988765
Q ss_pred h
Q psy1785 627 H 627 (629)
Q Consensus 627 ~ 627 (629)
.
T Consensus 451 ~ 451 (460)
T PRK12403 451 D 451 (460)
T ss_pred H
Confidence 4
No 299
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.78 E-value=1.1e-05 Score=87.65 Aligned_cols=307 Identities=10% Similarity=0.027 Sum_probs=166.7
Q ss_pred hhHHHHHHHHHHHHHHHhCCC---CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQ---GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~---~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
.....+-+.+.+++.+..|++ .. +.++|+|++++...++.+.... .| ....|++..-+...+..+
T Consensus 65 ~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~-------~~----~gd~vlv~~P~y~~~~~~ 133 (396)
T PRK09147 65 AGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDR-------DG----PGPLVVCPNPFYQIYEGA 133 (396)
T ss_pred CCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCC-------CC----CCCEEEEcCCCccchHHH
Confidence 334445566667777777854 33 6778888888765554432210 00 133455555555556677
Q ss_pred HHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeEEE
Q psy1785 329 AAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMADSV 403 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~lhV 403 (629)
+...|. +++.||++++ +.+|++.|++.+.+ .+.+++.+...+.+|.+- .+.+|.++|++|++|+.+
T Consensus 134 ~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~ 204 (396)
T PRK09147 134 ALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWA------RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIAS 204 (396)
T ss_pred HHhcCC---EEEEeccCccccCccCHHHHHHHHhh------ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEe
Confidence 888898 9999999744 47999999887753 244555667889999886 466777788999999998
Q ss_pred --ecCcccccccccccccccc-ccccccCC-cceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 404 --TWNPHKLLTAPQQCSVFLT-RRNYVIEV-VADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 404 --A~gg~~l~~~~~~~~~~l~-~~~~~i~~-gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
+|.-...-....-.+ .+. ....+... .=-.+..++-|.++.| .-+|.++.. +.+.+...... .+..
T Consensus 205 De~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~-~~l~~~~~~~~-~~~~------ 275 (396)
T PRK09147 205 DECYSEIYFDEAAPPLG-LLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD-AALLKKFLLYR-TYHG------ 275 (396)
T ss_pred eccccccccCCCCCCch-hhhhccccCccccccEEEEeccccccCCccceeeeecCC-HHHHHHHHHHh-hhcc------
Confidence 666533211000000 000 00000000 0127788999965554 567877654 34443321100 0100
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~ 557 (629)
+ ....+...+++..+ ..+-+++..+...+..+.+.+.|++. +.+. .|.-+.+.+--.| .
T Consensus 276 ------------~--~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~--~p~~g~f~~~~~~--~ 335 (396)
T PRK09147 276 ------------C--AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--LDVQ--LPDAGFYLWAKVP--G 335 (396)
T ss_pred ------------c--CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--cCCC--CCCeeEEEEEECC--C
Confidence 0 00111111111121 22335555556666667777777763 4332 3555444332122 1
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeec-------CCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPI-------HALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~-------~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
. . .++.++|. +.|..+.....+ ....+++|++++. ++++++..++.|+++.
T Consensus 336 ~----~-----------~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~---~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 336 D----D-----------TEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA---PLAECVEAAERIVDFC 394 (396)
T ss_pred C----H-----------HHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHh
Confidence 0 0 24555654 567654332221 1123689999973 4678888888877654
No 300
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.77 E-value=7.9e-06 Score=87.65 Aligned_cols=290 Identities=10% Similarity=0.012 Sum_probs=166.0
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEE
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVY 340 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~ 340 (629)
+..+.+++.++++..+.++++|++++...++.+ ... +. .|++..-+...+...++..|. +++
T Consensus 61 ~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~-l~~-------------g~-~vlv~~P~y~~~~~~~~~~g~---~~~ 122 (360)
T PRK07392 61 ELRLALAQHHQLPPEWILPGNGAAELLTWAGRE-LAQ-------------LR-AVYLITPAFGDYRRALRAFGA---TVK 122 (360)
T ss_pred HHHHHHHHHhCcChhhEEECCCHHHHHHHHHHH-hCC-------------CC-eEEEECCCcHHHHHHHHHcCC---eEE
Confidence 555667777788888899999998876554432 111 22 355555566677788899999 999
Q ss_pred EEecCCCCCC--CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 341 LIKTDARGRM--LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 341 ~V~~d~~g~~--d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
.||.+.++.. +..++++..... ..+.+++.+...+.+|.+-+-++|.+++++++ ++.+ +|.....-..+..
T Consensus 123 ~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~-~~IiDE~y~~~~~~~~~~s 197 (360)
T PRK07392 123 ELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNNPHNPTGKLWSREAILPLLEQFA-LVVVDEAFMDFLPPDAEQS 197 (360)
T ss_pred EEecccccCCcccccCHHHHHHhc----cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCC-EEEEECchhhhccCccccc
Confidence 9999865432 222333332221 13456777788999999999999999999997 4555 6654432111000
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
+-..+. . .+. =.++.++-|.++.| +-+|.++... ..++....... . + ..
T Consensus 198 ~~~~~~--~--~~~--vi~i~S~SK~~~l~GlRiG~~v~~~-~~~~~~~~~~~-~----------------~------~~ 247 (360)
T PRK07392 198 LIPCLA--E--YPN--LIILRSLTKFYSLPGLRLGYAIAHP-DRLQRWQQWRD-P----------------W------PV 247 (360)
T ss_pred hHHHhh--c--CCC--EEEEEechhhhcCCchheeeeeCCH-HHHHHHHhhCC-C----------------C------CC
Confidence 000000 0 111 25667899999844 6688887643 34433211000 0 0 11
Q ss_pred chHHHHHHHHhcChhhHHHH-HHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHH
Q psy1785 496 DVLKFWFMWKAKGTDGLEAH-IDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVA 574 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~-~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~ 574 (629)
..+..+++..++....+.+. .+...+..+++.+.|++++++.+. ++. .++.+ ..-+. + .
T Consensus 248 s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~--~~~-~~fl~-~~~~~-----~-----------~ 307 (360)
T PRK07392 248 NGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL--PSA-ANFLL-VQSQG-----S-----------A 307 (360)
T ss_pred CHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC--CCC-CCEEE-EEcCC-----C-----------H
Confidence 23344444444433344443 344555677888999888888753 222 33322 21110 0 1
Q ss_pred HHHHHHH-HhcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 575 PKIKERM-MKSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 575 ~~i~~~l-~~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.++.+++ .+.|..+.......+ ..++||++++ +.++.+.|.++|+++.+
T Consensus 308 ~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~----~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 308 LQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR----TEAENQRLLEALAAILA 358 (360)
T ss_pred HHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhh
Confidence 2456665 456765443333322 2369999997 35677888888888754
No 301
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.76 E-value=1.1e-05 Score=88.68 Aligned_cols=302 Identities=15% Similarity=0.106 Sum_probs=159.5
Q ss_pred HHHHHHHHHHhCCCC--C-CeEEe-CCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC--
Q psy1785 260 EHVLAQMRTIVGFQG--G-DGIFC-PGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG-- 333 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~--~-~g~~~-~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG-- 333 (629)
.++.+.+++++..+. . ...|+ ++||+||..|++.||.. .| .+ .+|...+.-|-...-+..+.|
T Consensus 85 ~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~-------tg---r~-~ii~~~~~yHG~t~~~ls~~~~~ 153 (425)
T PRK09264 85 REFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARKV-------TG---RT-NIVAFTNGFHGMTLGSLAVTGNS 153 (425)
T ss_pred HHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHHh-------cC---CC-eEEEECCccCCccHHHHHhcCCc
Confidence 444555666542221 1 34564 79999999999999875 12 22 345556666765443333321
Q ss_pred -------CCCCCEEEEecCCCC---CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc----cCHHHHHHHHHHcCC
Q psy1785 334 -------LGSDNVYLIKTDARG---RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF----DPIPAIADICAEYDM 399 (629)
Q Consensus 334 -------lg~~~v~~V~~d~~g---~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i----dpl~ei~~i~~~~~~ 399 (629)
.....+..+|..... .-|+++|++.+++..........|++--.....|.+ +.+++|+++|++||+
T Consensus 154 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~ 233 (425)
T PRK09264 154 HKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDI 233 (425)
T ss_pred ccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCc
Confidence 112356667764211 126777888776532111123344443333334433 469999999999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
++.+ .+.|...... ++.....++ . .|.++++ |.++. -+.+|+++++++ . . .+. ....
T Consensus 234 llI~DEV~tG~GrtG~------~~~~~~~~v-~-PDi~t~~--K~l~~~G~pigav~~~~~-i-~-~~~--~~~~----- 293 (425)
T PRK09264 234 LLIVDDIQAGCGRTGT------FFSFERAGI-T-PDIVTLS--KSISGYGLPMALVLIKPE-L-D-VWK--PGEH----- 293 (425)
T ss_pred EEEEechhhCCccccH------HHHHhhcCC-C-CCEEEec--cccCCCccceEEEEEchh-h-h-ccC--CCcc-----
Confidence 9988 5544321111 000111123 2 6888885 98875 455788888764 2 2 111 0000
Q ss_pred CCCcccCCCCccCCCCCCcchHHHHHHH-HhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCCc-eEEEE
Q psy1785 477 FYDTKYDSGDKHIQCGRKPDVLKFWFMW-KAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPEC-TNISF 550 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~~al~~w~~l-~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~~-~~v~F 550 (629)
.+ |. .+.+........++ ..+..+ +..++..++.++|+++|++. |.+ +.. -+.. ..+.+
T Consensus 294 -------~~--T~-~gnp~~~aaa~a~l~~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~-vrg~Gl~~~i 358 (425)
T PRK09264 294 -------NG--TF-RGNNLAFVTATAALEEYWSDD---AFEKEVKAKGELVRERLEEIAAKYPGL-GAE-VRGRGMMQGI 358 (425)
T ss_pred -------CC--CC-CCCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHHhCCCc-eec-ceecccEEEE
Confidence 00 10 12222233333444 333333 34455556777777766552 222 111 1111 22233
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+.+. .....+.+.+.++|.++ ...... .+.||+++. ...|++||+.+++.|++..+
T Consensus 359 ~l~~~----------------~~~~~l~~~~~~~Gv~~-~~~~~~--~~~lr~~p~-l~~t~~ei~~~~~~l~~~l~ 415 (425)
T PRK09264 359 DFGDG----------------ELAGKIAAEAFENGLII-ETSGPE--DEVVKLLPP-LTIDEEELEEGLDILEEAVA 415 (425)
T ss_pred EecCh----------------HHHHHHHHHHHHCCCEE-eccCCC--CCEEEEeCC-CCCCHHHHHHHHHHHHHHHH
Confidence 33210 11246778888999654 222111 257898884 78999999999999987654
No 302
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=98.75 E-value=3.1e-05 Score=85.50 Aligned_cols=315 Identities=16% Similarity=0.092 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC---
Q psy1785 259 EEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL--- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl--- 334 (629)
..++.+++++++.... ....|+.+||+|+..|++.||... | . ..+|...+.-|-...-+..+.+.
T Consensus 101 ~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t-------g---r-~~ii~~~~~yHG~t~~al~~~~~~~~ 169 (443)
T PRK06058 101 YVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYT-------G---R-QAVVVFDHAYHGRTNLTMALTAKSMP 169 (443)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhh-------C---C-CeEEEECCCcCcChHHHHhhcCCCcc
Confidence 3455666777764322 367899999999999999998751 2 2 33555666677766555543321
Q ss_pred -----C--CCCEEEEecCCCCC------CCH-HHHHHHHHHHHh--CCCCcEEEEEeeCCCccccccC----HHHHHHHH
Q psy1785 335 -----G--SDNVYLIKTDARGR------MLP-ESLRGEIQRTLA--EGAVPFMVSATSGTTVLGAFDP----IPAIADIC 394 (629)
Q Consensus 335 -----g--~~~v~~V~~d~~g~------~d~-~~Le~~i~~~~~--~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~ 394 (629)
+ ...+..+|.....+ .+. +.+++.++...+ .+...-.|+..-.....|.+-| +++|+++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc 249 (443)
T PRK06058 170 YKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWC 249 (443)
T ss_pred cccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHH
Confidence 1 12344444211111 111 222222222111 1223334444333333455544 89999999
Q ss_pred HHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccc
Q psy1785 395 AEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLF 472 (629)
Q Consensus 395 ~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~ 472 (629)
++||+.+++ .+.|.......+ -....++ . .|.+++. |.++.-+..|.++.+++ +.+. +.. ...
T Consensus 250 ~~~gillI~DEV~tGfgRtG~~f------a~~~~gv-~-PDiv~~g--K~l~~G~Pi~av~~~~~-i~~~-~~~--~~~- 314 (443)
T PRK06058 250 RENGVVFIADEVQTGFARTGAWF------ACEHEGI-V-PDLITTA--KGIAGGLPLSAVTGRAE-IMDA-PHP--GGL- 314 (443)
T ss_pred HHcCCEEEEeccccCCCcChhhh------HHHhcCC-C-CCEEEEc--ccccCCCccEEEEEcHH-HHhh-ccC--CCC-
Confidence 999999988 444322111100 0111133 2 5888885 98876677888888763 3322 110 000
Q ss_pred cCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEEEE
Q psy1785 473 QKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNISF 550 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v~F 550 (629)
. .| -++.+........+|+.+..++ ..++..++.++|.++|+++. ...++.+ ...-..+.+
T Consensus 315 -----------~--~T-~~gnpl~~aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i 377 (443)
T PRK06058 315 -----------G--GT-YGGNPVACAAALAAIETIEEDD---LVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAI 377 (443)
T ss_pred -----------C--CC-CCCCHHHHHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEE
Confidence 0 01 1233333344444555544443 45566667888888887642 1222220 122233344
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
.+.++. ... .+ .++...+.+++.++|.++...... .++||+... ...|++|||.+++.|++..++|
T Consensus 378 ~~~~~~-~~~-~~-------~~~~~~l~~~~~~~Gv~~~~~~~~---~~~lr~~Pp-l~~t~~~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 378 ELVKPG-TTE-PD-------AELTKALAAAAHAAGVIVLTCGTY---GNVIRLLPP-LVIGDELLREGLDVLEAALADL 443 (443)
T ss_pred EEecCC-CCC-Cc-------HHHHHHHHHHHHHCCeEEeccCCC---CCEEEEECC-CccCHHHHHHHHHHHHHHHHhC
Confidence 443221 010 01 112346778888999654221111 258999985 8899999999999999887654
No 303
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.74 E-value=4e-06 Score=90.09 Aligned_cols=295 Identities=11% Similarity=0.044 Sum_probs=164.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC---CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ---GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~---~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|........+.+.+.+++.+..|++ ..+.++|+|++++...+..+..- .|...|++..-+|..+
T Consensus 58 Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-------------~~gd~Vl~~~p~y~~~ 124 (364)
T PRK07865 58 YPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGL-------------GPGDVVVIPELAYPTY 124 (364)
T ss_pred CCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcC-------------CCCCEEEECCCCcccH
Confidence 3333444556667777777776654 56888899988876553332211 1344577777888888
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeEE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMADS 402 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~lh 402 (629)
..++..+|. +++.++ ++++++. ..+.+|+.+...+.+|.+- .+++|.++|+++++++.
T Consensus 125 ~~~~~~~g~---~~~~~~-------~~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii 185 (364)
T PRK07865 125 EVGARLAGA---TVVRAD-------SLTELGP---------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVA 185 (364)
T ss_pred HHHHHhcCC---EEEecC-------ChhhCCc---------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 888998888 776664 2222221 1344566667788899774 46788888999999999
Q ss_pred E--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 403 V--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 403 V--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
+ +|.....-.++ .+. +...-.+....-..++.++.|.++.|- -+|.+. .++++........ .+..
T Consensus 186 ~De~y~~~~~~~~~--~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~-~~~~~~~~~~~~~-~~~~------- 253 (364)
T PRK07865 186 SDECYLELGWDAEP--VSI-LDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVA-GDPALVAELLEVR-KHAG------- 253 (364)
T ss_pred EecchhhhccCCCC--Ccc-ccccccCCccceEEEEeechhccCCCceeeEEEe-cCHHHHHHHHHHH-HhcC-------
Confidence 9 77643321110 000 000000001112478889999987653 356554 4444444321100 0000
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLR 558 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~ 558 (629)
+ + ...+...++.+.+.. +-+++..+...+..+.+.+.|++. |+++. .|+.+. .+|...+.
T Consensus 254 -------~---~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~-~~~~~~~~-- 314 (364)
T PRK07865 254 -------M---M---VPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVD--HSEAGL-YLWATRGE-- 314 (364)
T ss_pred -------C---C---cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCccE-EEEEeCCC--
Confidence 0 0 011222222233322 334555566667788888898886 77654 355443 34443110
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
+ ...+.+.|.+.|..+....... ...++||++++ . ++++++..++.|+
T Consensus 315 ----~----------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~-~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 ----D----------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT-A--TDERIAAAVERLA 363 (364)
T ss_pred ----C----------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec-C--CHHHHHHHHHHhh
Confidence 0 0245567778887654332221 12469999996 3 5889998887764
No 304
>PRK06149 hypothetical protein; Provisional
Probab=98.74 E-value=1.2e-05 Score=96.94 Aligned_cols=317 Identities=14% Similarity=0.077 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC-----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG----- 333 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG----- 333 (629)
..+..+++++++.-+-....|+++||+||..|++.||... | .+.+|...+.-|-...-+..+.+
T Consensus 626 ~~elae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~ga~~~s~~~~~~ 694 (972)
T PRK06149 626 VAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRLAWAAS-------G----RRDVVSVLEAYHGWTVATDAVSTSIADN 694 (972)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHhc-------C----CCeEEEEeCCCCCcChhHhhhcCCcccc
Confidence 3455566777763222478999999999999999999752 2 23355566667743322221111
Q ss_pred -----CCCCCEEEEecCCCCC--C---C-----HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHH
Q psy1785 334 -----LGSDNVYLIKTDARGR--M---L-----PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADIC 394 (629)
Q Consensus 334 -----lg~~~v~~V~~d~~g~--~---d-----~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~ 394 (629)
-..+.+..++.....+ . | .+++++.++...+.+.....|++---....|.+-| +++++++|
T Consensus 695 ~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc 774 (972)
T PRK06149 695 PQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAV 774 (972)
T ss_pred ccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHH
Confidence 0112344454332211 1 2 35666667655444445555555444445577878 99999999
Q ss_pred HHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccc
Q psy1785 395 AEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLF 472 (629)
Q Consensus 395 ~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~ 472 (629)
++||+.+++ ..-|.-..... +.-..+.|+ . .|.+++ -|.++.-+..|+++++++ +.. .+... .+++
T Consensus 775 ~~~g~llI~DEV~tGfGRtG~~-----~~a~e~~gv-~-PDivt~--gK~lg~G~Pl~av~~~~~-i~~-~~~~~-~~~~ 842 (972)
T PRK06149 775 RARGGVCIADEVQVGYGRLGHY-----FWGFEQQGV-V-PDIITM--AKGMGNGHPLGAVITRRE-IAE-ALEAE-GYFF 842 (972)
T ss_pred HHcCCEEEEEeehhcCCccCcc-----chhhhhcCC-C-CCEEEe--cccccCCeeeEEEEEcHH-HHh-hhccC-Cccc
Confidence 999999988 43222111110 001112244 3 788876 688876566788988773 332 22211 1111
Q ss_pred cCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCC-cEEEcc-CCCceEEEE
Q psy1785 473 QKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPG-FKLVLD-EPECTNISF 550 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g-~~l~~~-~p~~~~v~F 550 (629)
. |. ++.+..+.....+|+.+-.++ +.++..++.++|++.|++... ..++.+ .-.-..+.+
T Consensus 843 s--------------T~-~gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gv 904 (972)
T PRK06149 843 S--------------ST-GGSPVSCRIGMAVLDVLREEK---LQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGV 904 (972)
T ss_pred C--------------CC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEE
Confidence 1 11 334444444555566655554 455666677888888776411 111210 011112233
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+..+...... . .+....+.++|.++|.++ ... ....++||+..- ..+|++|||.+++.|++...+
T Consensus 905 el~~~~~~~~~-~-------~~~~~~i~~~l~~~Gvl~-~~~--g~~~~vl~~~Pp-l~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 905 ELVRDRQTLEP-A-------TEETAAICDRLLELGVIM-QPT--GDHLNILKIKPP-LCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEecCcccCCC-C-------hHHHHHHHHHHHhCCeEE-eec--CCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHh
Confidence 33221100000 0 012346888999999654 322 112368998884 679999999999999987643
No 305
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.73 E-value=2.2e-05 Score=85.26 Aligned_cols=303 Identities=9% Similarity=0.023 Sum_probs=167.1
Q ss_pred HHHHHHHHHHHHHHHhCCC----CC-CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH
Q psy1785 255 FSLMEEHVLAQMRTIVGFQ----GG-DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA 329 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~~----~~-~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa 329 (629)
...+-+.+.+++.+..|++ .. +.++|+|++++...++.+... .| ....|++..-+.......+
T Consensus 66 ~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~--------~g----d~~~vlv~~P~y~~~~~~~ 133 (393)
T TIGR03538 66 LPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVIN--------PG----QAPLVVMPNPFYQIYEGAA 133 (393)
T ss_pred CHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcC--------CC----CcceEEecCCCCcchHHHH
Confidence 3445556666676665654 33 577889999887655544322 12 1223555555555566778
Q ss_pred HHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE-
Q psy1785 330 AFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV- 403 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV- 403 (629)
...|. +++.||++++ ..+|+++|++++.+ .+.+|+.+...+.+|.+-+ +.+|.++|+++++++.+
T Consensus 134 ~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~D 204 (393)
T TIGR03538 134 LLAGA---EPYFLNCTAENGFLPDFDAVPESVWR------RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASD 204 (393)
T ss_pred HhcCC---eEEEeeccccCCCCCCHHHHHHHHhh------cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEC
Confidence 88998 9999999754 46899999888754 2345556788999998876 77888889999999988
Q ss_pred -ecCccccccc-ccccccccccccccc-CCcceEEEeCCCCCC-CCCCccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 404 -TWNPHKLLTA-PQQCSVFLTRRNYVI-EVVADSVTWNPHKLL-TAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 404 -A~gg~~l~~~-~~~~~~~l~~~~~~i-~~gaDsv~~~~HK~l-~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
+|.....-.. +.. +.+......+. ...=-.++.++-|.+ ..-.-+|.++.. +.++....... .+.
T Consensus 205 e~Y~~~~~~~~~~~~-~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~-~~l~~~~~~~~-~~~-------- 273 (393)
T TIGR03538 205 ECYSELYFDEGNPPA-GLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD-AEILKAFLRYR-TYH-------- 273 (393)
T ss_pred cchhhcccCCCCCCc-CHHHhcccccccccccEEEEecchhhcCCcccceEEEecC-HHHHHHHHHHH-Hhh--------
Confidence 6654322100 000 00000000000 000126788999954 444567877654 33443321100 000
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcC-hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCC
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKG-TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLR 558 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G-~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~ 558 (629)
+.....+..+.++..+. .+-+++..+...+..+.+.+.|++. +.+. .|.-+.+++--.| .
T Consensus 274 ------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~--~~~~--~p~gg~f~~~~~~--~- 334 (393)
T TIGR03538 274 ------------GCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV--LDLE--LPDAGFYLWPKVP--G- 334 (393)
T ss_pred ------------ccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh--Cccc--CCCeeEEEEEECC--C-
Confidence 00011222222222222 2345555666666777788888764 3332 3555554332222 0
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeec-------CCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPI-------HALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~-------~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
+. .++.+.+. +.|..+..+..+ ....+++|++++ . ++++++..++.|+++
T Consensus 335 ---~~-----------~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~-~--~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 335 ---DD-----------EAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV-A--PLEECVEAAERIRSF 392 (393)
T ss_pred ---CH-----------HHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec-C--CHHHHHHHHHHHHHh
Confidence 00 24555664 467654333222 111368999986 3 578888888777654
No 306
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.73 E-value=6.5e-06 Score=88.16 Aligned_cols=282 Identities=11% Similarity=0.071 Sum_probs=160.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++.++++..+.++|+|++++...++.+... |...|++..-+.......+...|. .+
T Consensus 68 ~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~~~~~--------------~gd~V~v~~P~y~~~~~~~~~~g~---~~ 130 (357)
T PRK14809 68 ADLTAALADRWDVSPEQVWLANGGDGALDYLARAMLD--------------PGDTVLVPDPGFAYYGMSARYHHG---EV 130 (357)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcC--------------CCCEEEEeCCChHHHHHHHHHcCC---eE
Confidence 3556667777888888899999999987655443211 333455554444444556777888 88
Q ss_pred EEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--CCeEEE--ecCccccccc
Q psy1785 340 YLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--DMADSV--TWNPHKLLTA 413 (629)
Q Consensus 340 ~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~~~lhV--A~gg~~l~~~ 413 (629)
+.++++. +..+|++++++.+. .+.+|..+...+.+|.+-+.+++.++++.. +.++.+ +|..... .
T Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~-------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~--~ 201 (357)
T PRK14809 131 REYPVSKADDFEQTADTVLDAYD-------GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAE--R 201 (357)
T ss_pred EEEecccCcCCCcCHHHHHHhhc-------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccC--C
Confidence 8888864 34667776655432 133566678899999999988888887764 677777 6654321 1
Q ss_pred cccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCC
Q psy1785 414 PQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCG 492 (629)
Q Consensus 414 ~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 492 (629)
+ .....+.. -+. =.+..++-|.++.| +-+|.++..+ +++......... +
T Consensus 202 ~-~~~~~~~~----~~~--vi~~~SfSK~~~~~GlRiG~~~~~~-~~~~~~~~~~~~-----------------~----- 251 (357)
T PRK14809 202 P-SAVALVEE----RDD--VAVLRTFSKAYGLAGLRLGYAVVPE-EWADAYARVNTP-----------------F----- 251 (357)
T ss_pred c-hhHHHHhh----CCC--EEEEecchhHhcCcchhheeeecCH-HHHHHHHHhCCC-----------------C-----
Confidence 0 00000010 011 14556888999854 5578877654 344432211100 0
Q ss_pred CCcchHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 493 RKPDVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 493 r~~~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
....+..++++..+..++ +++..+...+..+++.+.|... .. ++..+.+.+++ +.
T Consensus 252 -~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~-~~~g~f~~~~~-~~---------------- 307 (357)
T PRK14809 252 -AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP-----TW-ESAGNFVLAEV-GD---------------- 307 (357)
T ss_pred -CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc-----cC-CCCCCEEEEEC-CC----------------
Confidence 012333444444443333 3344444444555566666432 12 23333333332 10
Q ss_pred hHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 572 KVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 572 ~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..++.+.+.++|..+...... +..++||+++. +.++++.+++.|+++.++
T Consensus 308 --~~~~~~~l~~~gv~v~~g~~f-~~~~~iRls~~----~~~~~~~~l~~L~~~l~~ 357 (357)
T PRK14809 308 --ASAVAEAAQERGVIVRDCTSF-GLPECIRITCG----TREETERAVEVLNEVLAD 357 (357)
T ss_pred --HHHHHHHHHHCCEEEEECccC-CCCCeEEEecC----CHHHHHHHHHHHHHHhcC
Confidence 024566777788655443333 33469999985 368999999999887653
No 307
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.73 E-value=6.9e-06 Score=88.02 Aligned_cols=290 Identities=13% Similarity=0.041 Sum_probs=159.6
Q ss_pred hhHHHHHHHHHHHHHHHhCCC---CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQ---GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA 329 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~---~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa 329 (629)
.....+.+++.+++.+..|++ ..+.++|+|++++...++....- .|...|++..-++..+...+
T Consensus 56 ~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~-------------~~gd~Vl~~~p~y~~~~~~~ 122 (357)
T TIGR03539 56 WGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGL-------------GPGDTVVIPELAYPTYEVGA 122 (357)
T ss_pred cCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcC-------------CCCCEEEECCCCcHHHHHHH
Confidence 334556667777777766654 46888899999876554332211 14456777888888888888
Q ss_pred HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--e
Q psy1785 330 AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A 404 (629)
..+|. +++.++ |++.|+. ..+.+|+.+...+.+|.+-+ +++|.++|+++++++++ +
T Consensus 123 ~~~g~---~~~~v~-------~~~~l~~---------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~ 183 (357)
T TIGR03539 123 LLAGA---TPVAAD-------DPTELDP---------VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDEC 183 (357)
T ss_pred HhcCC---EEeccC-------ChhhcCc---------cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecc
Confidence 88887 666553 2222221 13445666778899998765 66788889999999999 6
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
|.....-..+ .+ .+.....+....=-++..++.|.++.|-. +|.++. ++.+..........+
T Consensus 184 y~~~~~~~~~--~~-~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~~~~~~~~~~~------------- 246 (357)
T TIGR03539 184 YLELGWEGRP--VS-ILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALVAELLTVRKHA------------- 246 (357)
T ss_pred hhhhccCCCC--cc-ceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHHHHHHHHHhhc-------------
Confidence 6532211010 00 00000000000013677899999866533 566654 444443321110000
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCc
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~ 562 (629)
+.....+...++..++-. ..+++..++..+..+++.+.|++. |+++. +|..+.+ +|...+. +
T Consensus 247 --------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~--~p~~~~~-~~~~~~~-----~ 309 (357)
T TIGR03539 247 --------GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID--HSEAGLY-LWATRGE-----D 309 (357)
T ss_pred --------ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc--CCCccEE-EEEECCC-----C
Confidence 000111222222333322 334555555666778888888885 77654 3555443 3332110 0
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHHHHHH
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYFIDEI 622 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l~~~i 622 (629)
...+.++|.+.|..+....... ...+++|+++++ ++++|+..++.|
T Consensus 310 -----------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 310 -----------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA---TDERIAAAVARL 356 (357)
T ss_pred -----------HHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC---CHHHHHHHHHhh
Confidence 1245667778886543322211 123699999963 578888887654
No 308
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=98.72 E-value=2.5e-05 Score=85.24 Aligned_cols=301 Identities=13% Similarity=0.095 Sum_probs=163.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG---- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg---- 335 (629)
.+..++++++.... ....|+.+||+|+..|++.||... ++.|.....+.++...+.-|-...-+....|-.
T Consensus 85 ~~la~~L~~~~~~~-~~v~f~~sGseA~e~AlklAr~~~----~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~ 159 (408)
T PRK04612 85 LKLAEELVTASRFA-EKVFLCNSGTEANEAAIKLVRKWA----SSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQE 159 (408)
T ss_pred HHHHHHHHhhCCCC-CEEEEcCchHHHHHHHHHHHHHHH----HhhCCCCCCcEEEEECCCcCCccHHHHHhcCCccccc
Confidence 44555666665432 468999999999999999999752 122321012235556666676654444433311
Q ss_pred -----CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--e
Q psy1785 336 -----SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--T 404 (629)
Q Consensus 336 -----~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A 404 (629)
...++.+|. -|++.|++.+. .+ ...+|+..-.....|.+.| +++++++|++||+++++ .
T Consensus 160 ~~~~~~~~~~~~~~-----~d~~~l~~~~~----~~-~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv 229 (408)
T PRK04612 160 GYEPLPGGFRYVDF-----NDVEALEAAMA----GG-DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEI 229 (408)
T ss_pred CCCCCCCCceEcCC-----CCHHHHHHhhC----CC-CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecc
Confidence 112333332 27788877763 12 3334443322223344432 89999999999999988 5
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCC
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~ 484 (629)
+.+...... ++.....++ . .|.+++ -|.++.-+..|.++.+++ ... .+... .. .
T Consensus 230 ~tg~gr~G~------~~a~~~~~~-~-pdi~t~--~K~l~~G~piga~~~~~~-~~~-~~~~~----~~----------~ 283 (408)
T PRK04612 230 QCGMGRTGT------LFAHWQEQV-T-PDIVTL--AKALGGGFPIGAMLAGPK-VAE-TMQFG----AH----------G 283 (408)
T ss_pred ccCCCcCCc------hhhhhhcCC-C-CCEEEE--cchhcCCCceEEEEECHH-HHh-hhcCC----Cc----------C
Confidence 554221111 000001011 2 466655 688875556788877653 322 21110 00 0
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEEEEEeeCCCCCCCCc
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNISFWYIPPSLRGKED 562 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v~F~~~p~~~~~~~~ 562 (629)
. +. ++.+.....+..+|+.+-.+ ++.++..++.++|.+.|++.. .+.++.+ ...-..+.+.+.+..
T Consensus 284 ~--t~-~~~p~~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~------ 351 (408)
T PRK04612 284 T--TF-GGNPLAAAVARVALRKLASP---QIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH------ 351 (408)
T ss_pred C--CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch------
Confidence 1 11 23344444445555555443 456677778888888887642 1222220 112222233322110
Q ss_pred hhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 563 QADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
......+.+.+.++|.++.. .+ .+.+|+++. ...|++|||.+++.|++...
T Consensus 352 --------~~~a~~i~~~l~~~Gvlv~~----~g-~~~lRl~Pp-l~it~eeid~~l~~l~~~l~ 402 (408)
T PRK04612 352 --------AGQAGAILDLAAEHGLLLLQ----AG-PDVLRFVPA-LNLTDAELADGLARLRLALA 402 (408)
T ss_pred --------hhHHHHHHHHHHHCCeEEee----CC-CCEEEEcCC-ccCCHHHHHHHHHHHHHHHH
Confidence 01124677888899965422 12 258999984 88999999999999987654
No 309
>PRK06855 aminotransferase; Validated
Probab=98.72 E-value=3e-05 Score=85.42 Aligned_cols=329 Identities=14% Similarity=0.090 Sum_probs=171.1
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIK 326 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ 326 (629)
|....+...+-+.+.+|+.+..|++ ..+.++|+|++++...++. .. .|...|++..-+.+...
T Consensus 69 Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~-l~--------------~~Gd~Vlv~~P~Y~~~~ 133 (433)
T PRK06855 69 YCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYG-LL--------------RREARVIGPSPAYSTHS 133 (433)
T ss_pred CCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHH-hc--------------CCCCeEEEeCCCCchHH
Confidence 4333444445455666676655653 3678899999988655542 11 13333444444443333
Q ss_pred HH-HHHcCCCCCCEEEEecCC-C-CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCe
Q psy1785 327 KL-AAFEGLGSDNVYLIKTDA-R-GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMA 400 (629)
Q Consensus 327 ka-a~~lGlg~~~v~~V~~d~-~-g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~ 400 (629)
.+ ....|+ +++.||+++ + ..+|+++|++++.. +..+..++.+...+-+|.+-+ +.+|.++|+++++|
T Consensus 134 ~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~----~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~ 206 (433)
T PRK06855 134 SAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKY----NPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLF 206 (433)
T ss_pred HHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhc----CCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 22 223466 788888874 3 46899999988753 112344555667888998866 55667778999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEec---cchhhhhhcCCCCccccC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRH---QSVLTECHSASASYLFQK 474 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~---~~~l~~~~~~~~~yl~~~ 474 (629)
+.. +|....+-..+ ...+... ...+--.+..++-|.++.| +=+|.+.+.+ ...+......-..+...
T Consensus 207 II~De~Y~~l~~~~~~--~~sl~~~----~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~- 279 (433)
T PRK06855 207 IICDEIYNNIVYNGKK--TVPLSEV----IGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMI- 279 (433)
T ss_pred EEEeccccccccCCCC--CCCHHHH----cCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhcc-
Confidence 999 66654321110 0000011 0111126778899999755 5588887632 11111110000000000
Q ss_pred CcCCCcccCCCCccCCCCCCcchHHHHHHHHhcCh----hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEE
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGT----DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISF 550 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~----~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F 550 (629)
. .+. ..+...++..++.. +-+++..+...+..+.+.+.|++.+++++. .|.-+.+++
T Consensus 280 -------------~-~~~---~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~--~p~gg~~~w 340 (433)
T PRK06855 280 -------------E-VCS---TTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLKVN--RTNGAFYMT 340 (433)
T ss_pred -------------c-cCC---ChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCeecc--CCCeeEEEe
Confidence 0 011 11222333333322 234445555566777788888887787643 465554443
Q ss_pred EeeCCCCC----CC-CchhhHHHHHhh-------HHHHHH-HHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHH
Q psy1785 551 WYIPPSLR----GK-EDQADFNELLHK-------VAPKIK-ERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDY 617 (629)
Q Consensus 551 ~~~p~~~~----~~-~~~~~~~~~l~~-------~~~~i~-~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~ 617 (629)
--.|+... +. .++.+..+.+.+ -..++. ..+.+.|..++.+.......+.+|+++++ .++++|+.
T Consensus 341 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~--~~~~~i~~ 418 (433)
T PRK06855 341 VVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLE--RDEEKFEW 418 (433)
T ss_pred eccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECC--CcHHHHHH
Confidence 22232210 00 000011111000 011233 34556786655444332222469999973 56899998
Q ss_pred HHHHHHHHhh
Q psy1785 618 FIDEIERLGH 627 (629)
Q Consensus 618 l~~~i~~l~~ 627 (629)
.++.|.++.+
T Consensus 419 ~~~~l~~~~~ 428 (433)
T PRK06855 419 IYQTLAEKIE 428 (433)
T ss_pred HHHHHHHHHH
Confidence 8888877654
No 310
>PRK07678 aminotransferase; Validated
Probab=98.71 E-value=3.6e-05 Score=85.09 Aligned_cols=328 Identities=12% Similarity=0.071 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
+.++.+.++++++.. ....|+.+||+|+..|++.||... ...|.++. ..+|...+.-|-...-+....|.
T Consensus 91 ~~~lae~l~~~~~~~-~~v~f~~sGseA~e~AlklAr~~t----~~~g~~~r-~~ii~~~~~yHG~t~~als~~~~~~~~ 164 (451)
T PRK07678 91 AIKLAEKLNEWLGGE-YVIFFSNSGSEANETAFKIARQYH----AQKGEPHR-YKFISRYRAYHGNSMGALAATGQAQRK 164 (451)
T ss_pred HHHHHHHHHHhCCCC-CEEEEeCCcHHHHHHHHHHHHHHH----HhcCCCCC-cEEEEECCCcCCccHHHhhcCCCcccc
Confidence 345566677776543 367899999999999999999752 11232112 33455556667654444433221
Q ss_pred -----CCCCEEEEecCCCCCC---------CH---HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 335 -----GSDNVYLIKTDARGRM---------LP---ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 335 -----g~~~v~~V~~d~~g~~---------d~---~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
....+..+|.....+. |. +.|++.|+. ..+...-.|++---....|.+-| +++++++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~l 242 (451)
T PRK07678 165 YKYEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEI 242 (451)
T ss_pred cccCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHH
Confidence 0123444543322111 11 123444432 11223334444333333466655 8999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
|++||+.+++ ..-|.-.....+ -...+|+ . .|.+++ -|.++.- +..|.++++++ +.. .+.....+
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~------~~~~~gv-~-PDivt~--gK~lggG~~Pi~av~~~~~-i~~-~~~~~~~~ 310 (451)
T PRK07678 243 CQKHGALLISDEVICGFGRTGKAF------GFMNYGV-K-PDIITM--AKGITSAYLPLSATAVKKE-IYE-AFKGKGEY 310 (451)
T ss_pred HHHcCCEEEEeehhhcCCcCchhH------HHHhcCC-C-CCEEEe--ecccccCCcceeEEEEcHH-HHH-HHhccCcc
Confidence 9999999988 332321111100 0111234 2 798888 5877654 35788888774 332 22211100
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC-CCcEEEcc-CCCceEE
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR-PGFKLVLD-EPECTNI 548 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~-~g~~l~~~-~p~~~~v 548 (629)
. .....+ | ..+.+........+|+.+-.++ +.++..++.++|++.|++. ....++.+ .-.-..+
T Consensus 311 ~--------~~~h~~--T-~~gnp~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~ 376 (451)
T PRK07678 311 E--------HFRHVN--T-FGGNPAACALALKNLEIMENEN---LIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLV 376 (451)
T ss_pred c--------ccccCC--C-CCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEE
Confidence 0 000001 1 1233334444455566655554 3455666777777766532 11111110 0111223
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee--cCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQP--IHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~--~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.+.+..+.......+ .+....+...|.++|.++ .... ..+..+.+|++.. ..+|++|||.+++.+++..
T Consensus 377 ~i~~~~~~~~~~~~~-------~~~a~~i~~~l~~~Gv~~-~~~g~~v~~~~~~lrl~Pp-l~it~~eid~~~~~l~~~l 447 (451)
T PRK07678 377 GIELVNDKETKEPAD-------NDKVASVVAACKEKGLII-GKNGDTVAGYNNVLTLSPP-LVISSEEIAFIVGTLKTAL 447 (451)
T ss_pred EEEEecCCcccCcCc-------hHHHHHHHHHHHHCCcEE-eecCccccCCCCEEEEECC-CcCCHHHHHHHHHHHHHHH
Confidence 333322110000000 122346788899999654 3211 1122368999985 7889999999999999877
Q ss_pred hcC
Q psy1785 627 HDL 629 (629)
Q Consensus 627 ~~l 629 (629)
++|
T Consensus 448 ~~~ 450 (451)
T PRK07678 448 ERI 450 (451)
T ss_pred Hhc
Confidence 653
No 311
>PRK06105 aminotransferase; Provisional
Probab=98.71 E-value=2.1e-05 Score=87.09 Aligned_cols=326 Identities=12% Similarity=0.061 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
+.++.+.+++++..+-....|+++||+||..|++.||... ...|.++ ...++...+.-|-...-+..+.+.
T Consensus 94 ~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~----~~~g~t~-r~~il~~~~~yHG~t~~a~s~t~~~~~~ 168 (460)
T PRK06105 94 VIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYN----NALGRPE-KKKIISRQRGYHGVTIASASLTGLPNNH 168 (460)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHH----HhcCCCC-CcEEEEecCccCCcchhheeccCCcccc
Confidence 3455566777764333468999999999999999998642 1123221 234555566667655443332221
Q ss_pred -----CCCCEEEEecCCCCCC-------------CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHH
Q psy1785 335 -----GSDNVYLIKTDARGRM-------------LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIAD 392 (629)
Q Consensus 335 -----g~~~v~~V~~d~~g~~-------------d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~ 392 (629)
....+..+|.....+. ..++|++.|... .......|++---....|.+-| ++++++
T Consensus 169 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~ 246 (460)
T PRK06105 169 RSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQA 246 (460)
T ss_pred cccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 1123444443211110 135566665421 1123444555444455577777 999999
Q ss_pred HHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCC
Q psy1785 393 ICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 393 i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
+|++||+.+++ ...|.-....-+ -....++. .|.+++ -|.++.- ++.|.++.+++ +.. .+.....
T Consensus 247 lc~~~~~llI~DEv~tG~GRtG~~f------~~~~~~v~--PDi~~~--gK~lggG~~P~~av~~~~~-i~~-~~~~~~~ 314 (460)
T PRK06105 247 VLRKYDILLVADEVICGFGRTGNMF------GCETFGIK--PDILVM--SKQLSSSYQPLSAVLMNEK-VYD-PIADESG 314 (460)
T ss_pred HHHHcCCeEEEeccccCCCcCchhh------hHHhcCCC--CCeeee--ecccccCcccceEEEEcHH-HHH-HHhcccc
Confidence 99999999988 332221111100 01112342 687776 4777653 24788888763 332 2221100
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEE
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNI 548 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v 548 (629)
... ...... | ..+.+..+.....+|+.+-.++ .+++..++.++|++.|+++....++.+ .-.-..+
T Consensus 315 ~~~-------~~~h~~--T-~~gnpl~~aaa~a~L~~i~~~~---l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~ 381 (460)
T PRK06105 315 KIG-------TFGHGF--T-ASGHPVAAAVALENLAIIEERD---LVGNAAERGARLQARLRALADHPLVGEVRGVGLIA 381 (460)
T ss_pred cCc-------ccccCC--C-CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEE
Confidence 000 000000 1 1233334444445566654443 556677788888888877533322220 0111223
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.+.++..... ..+. ...+...+...+.++|.++ .. . + +.+|++.. ...|++|||.+++.+++..++
T Consensus 382 gie~~~~~~~~~--~~~~---~~~~a~~i~~~~~~~Gvl~-~~--~-g--~~i~l~Pp-l~it~~eid~~~~~l~~~l~~ 449 (460)
T PRK06105 382 AVELVADKATKT--PFEP---PGKVGARANAAAHEHGVIS-RA--M-G--DTLAFCPP-LIITAAQVDEMVDRFGRALDD 449 (460)
T ss_pred EEEEecCcccCC--CCCc---hhHHHHHHHHHHHHCCeEE-Ee--c-C--CEEEEECC-CccCHHHHHHHHHHHHHHHHH
Confidence 344432211000 0000 0112346778888999654 22 1 2 57999884 668999999999999876543
No 312
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.70 E-value=3.4e-05 Score=84.31 Aligned_cols=303 Identities=14% Similarity=0.085 Sum_probs=159.7
Q ss_pred HHHHHHHHHHHhCCCC---CCeEE-eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC-
Q psy1785 259 EEHVLAQMRTIVGFQG---GDGIF-CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG- 333 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~---~~g~~-~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG- 333 (629)
..++.+++++++..+. ....| +++||+|+..|++.||.. .| .+ .++...+.-|-...-+....|
T Consensus 80 ~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~~-------tg---r~-~ii~~~~~yHG~t~~als~~~~ 148 (412)
T TIGR02407 80 KREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARKV-------TG---RS-NVVSFTNAFHGMTLGSLSVTGN 148 (412)
T ss_pred HHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhhh-------cC---CC-eEEEECCCcCCchHHHHHhcCC
Confidence 3445556666542221 13456 489999999999999975 12 22 345556666765544443322
Q ss_pred ------CC--CCCEEEEecCCCCC---CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccc----ccCHHHHHHHHHHcC
Q psy1785 334 ------LG--SDNVYLIKTDARGR---MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGA----FDPIPAIADICAEYD 398 (629)
Q Consensus 334 ------lg--~~~v~~V~~d~~g~---~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~----idpl~ei~~i~~~~~ 398 (629)
.| ...+..+|...... -+++.|++.+++........-.|+.---....|. -+-+++|+++|++||
T Consensus 149 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g 228 (412)
T TIGR02407 149 RFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHD 228 (412)
T ss_pred cccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 11 12455666532111 2466677777532111112233333322223343 345889999999999
Q ss_pred CeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCCCCccccCC
Q psy1785 399 MADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSASASYLFQKD 475 (629)
Q Consensus 399 ~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~ 475 (629)
+++.+ .+.|.--... ++.....++ . .|.++++ |+++. -+..|+++++++ . . .+. . ...
T Consensus 229 ~llI~DEV~tG~GRtG~------~~a~~~~~v-~-PDi~~~~--K~lg~~G~pigav~~~~~-~-~-~~~--~--~~~-- 289 (412)
T TIGR02407 229 ILLIVDDIQAGCGRTGT------FFSFEPAGI-E-PDIVCLS--KSISGYGLPLALTLIKPE-L-D-VWK--P--GEH-- 289 (412)
T ss_pred CEEEEechhhCCCccch------hHHhcccCC-C-CCEEEec--hhccCCccceeEEEEchh-h-h-ccC--C--Ccc--
Confidence 99988 4443211111 000111123 2 6888876 99976 566899998764 2 2 111 0 000
Q ss_pred cCCCcccCCCCccCCCCCCcchHHHHHHHHh-cChhhHHHHHHHHHHHHHHHHHHHhc----CCCcEEEccCCCce-EEE
Q psy1785 476 KFYDTKYDSGDKHIQCGRKPDVLKFWFMWKA-KGTDGLEAHIDKSFDNAKYFTDKIRH----RPGFKLVLDEPECT-NIS 549 (629)
Q Consensus 476 ~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~-~G~~G~~~~~~~~~~la~~l~~~L~~----~~g~~l~~~~p~~~-~v~ 549 (629)
.. |. .+..........+++. +..+.+. ++..++.++|+++|++ .+++. .. .+..+ .+.
T Consensus 290 --------~~--T~-~gnpl~~aaa~a~l~~~i~~~~l~---~~~~~~g~~l~~~l~~l~~~~~~~~-~~-vrg~Gl~~~ 353 (412)
T TIGR02407 290 --------NG--TF-RGNNLAFVTATAALEYYWSDDAFE---KAVQRKSEIIQERLDRIVAEYPELI-KQ-VRGRGLMQG 353 (412)
T ss_pred --------CC--CC-CccHHHHHHHHHHHHHHhcccHHH---HHHHHHHHHHHHHHHHHHhhCCCce-Ee-eecceeEEE
Confidence 00 11 1222222334555663 4444444 4444566666666653 33332 11 12222 223
Q ss_pred EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 550 FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 550 F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+.+. .....+.+.+.++|.++ ...... .+.+|+++. ...|++|+|.+++.|++..+
T Consensus 354 l~l~~~----------------~~~~~~~~~~~~~Gv~v-~~~~~~--~~~lr~~p~-l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 354 IECGDG----------------DLAGKIAKAAFENGLII-ETSGPN--DEVIKLLPP-LTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred EEecCh----------------HHHHHHHHHHHHCCCEE-eccCCC--CCEEEEECC-CCCCHHHHHHHHHHHHHHHh
Confidence 333210 11246788899999754 322111 257999995 89999999999999998754
No 313
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.70 E-value=4.3e-05 Score=83.80 Aligned_cols=309 Identities=16% Similarity=0.130 Sum_probs=162.0
Q ss_pred HHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC-----
Q psy1785 260 EHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG----- 333 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG----- 333 (629)
.++.+.+.+++.-.. ....|+.+||+|+..|++.||.. .| .++ ++...+.-|-...-+..+.+
T Consensus 79 ~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~-------tg---r~~-ii~~~~~yHG~t~~~~~~~~~~~~~ 147 (420)
T TIGR00700 79 VALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSY-------TG---RPG-VVAFDHGFHGRTNMTMALTAKVMPY 147 (420)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHh-------cC---CCc-EEEECCCcCCCcHHHHHhcCCCccc
Confidence 344555666653221 36799999999999999999875 12 233 45566667765544443322
Q ss_pred ---CC--CCCEEEEecCCCCC-------C----CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 334 ---LG--SDNVYLIKTDARGR-------M----LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 334 ---lg--~~~v~~V~~d~~g~-------~----d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
++ ...+..+|.....+ . +++.+++.+... ..+.....|+.---....|.+-| +++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~l 226 (420)
T TIGR00700 148 KSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVPALLDW 226 (420)
T ss_pred ccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHHHHHHH
Confidence 11 22445555422111 1 134555554311 11223344444433334466555 8999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCcc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYL 471 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl 471 (629)
|++|++++++ .+.+........ .....++ . .|.++ .-|.++.-+..|.++.++ ++.... .. ...
T Consensus 227 c~~~gillI~DEV~tg~gr~g~~~------a~~~~~~-~-pDi~~--lsK~l~~G~pig~v~~~~-~i~~~~-~~--~~~ 292 (420)
T TIGR00700 227 CREHGIVFIADEVQTGFARTGAMF------ACEHEGP-E-PDLIT--TAKSLADGLPLSGVTGRA-EIMDAP-AP--GGL 292 (420)
T ss_pred HHHcCCEEEEEecccCCcccchhH------HHhhcCC-C-CCEEE--eeccccCCcceEEEEecH-HHHhhc-CC--CCc
Confidence 9999999988 555432211100 0111122 2 67766 578887656688888865 333221 10 000
Q ss_pred ccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc----CCCcEEEccCCCceE
Q psy1785 472 FQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH----RPGFKLVLDEPECTN 547 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~----~~g~~l~~~~p~~~~ 547 (629)
.. |+ ++.+.....+..+++.+..+++.++++ ++.+++++.|++ .|.+.-+. +.-..
T Consensus 293 ------------~~--T~-~~~pl~~aaa~a~l~~l~~~~~~~~~~---~~g~~l~~~L~~l~~~~~~~~~vr--g~G~~ 352 (420)
T TIGR00700 293 ------------GG--TY-AGNPLACAAALAVLAIIESEGLIERAR---QIGRLVTDRLTTLKAVDPRIGDVR--GLGAM 352 (420)
T ss_pred ------------CC--CC-CcCHHHHHHHHHHHHHHHhccHHHHHH---HHHHHHHHHHHHHHhhCCCEEEee--ccceE
Confidence 00 11 222323333333455555555544443 344455555543 33333232 33333
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+.+.++. ...+ + ......+.+.+.++|.++...... .+++|+++. ...++++|+..++.|++...
T Consensus 353 ~~i~~~~~~-~~~~-~-------~~~~~~l~~~~~~~Gv~i~p~~~f---~~~lRl~p~-l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 353 IAVELVDPG-TTEP-D-------AGLAERIATAAHAAGLLLLTCGMF---GNIIRFLPP-LTIGDELLSEGLDILCAILA 419 (420)
T ss_pred EEEEEecCC-CCCc-c-------HHHHHHHHHHHHHCCeEEeccCCC---CCEEEEECC-CCcCHHHHHHHHHHHHHHhh
Confidence 444443211 0000 1 112346777888999754322111 258999984 55889999999999988754
No 314
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.69 E-value=2e-05 Score=87.16 Aligned_cols=310 Identities=12% Similarity=0.087 Sum_probs=167.5
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+.+++++........|+.+||+||..|++.||.. .| . ..++...+.-|-...-+..+.+.
T Consensus 99 ~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~-------tg---r-~~ii~~~~~yHG~t~~a~s~~~~~~~~~ 167 (457)
T PRK05639 99 IRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFS-------TR---R-PWILAFIGAYHGQTLGATSVAAFQSSQK 167 (457)
T ss_pred HHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHh-------cC---C-CeEEEECCCcCCccHHHHHHcCCCcccc
Confidence 44555677766533346899999999999999999964 12 2 23555566677655544444331
Q ss_pred ---C--CCCEEEEecCCCCC--------CCHHHH--------HHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHH
Q psy1785 335 ---G--SDNVYLIKTDARGR--------MLPESL--------RGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPA 389 (629)
Q Consensus 335 ---g--~~~v~~V~~d~~g~--------~d~~~L--------e~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~e 389 (629)
+ ..++..+|.....+ -|++.+ ++.|......+...-.|++--.....|.+-| +++
T Consensus 168 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~ 247 (457)
T PRK05639 168 RGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKE 247 (457)
T ss_pred cCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHH
Confidence 1 23466676543211 133332 2222211001223334444333333355444 789
Q ss_pred HHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCC
Q psy1785 390 IADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSAS 467 (629)
Q Consensus 390 i~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~ 467 (629)
++++|++||+.+++ ...|.-.... ++-...+++ . .|.+++ -|.++.-++.|+++.+++ ... ...
T Consensus 248 l~~lc~~~g~llI~DEv~tG~GrtG~------~~a~~~~gv-~-PDiv~~--gK~l~gG~pi~av~~~~~-i~~-~~~-- 313 (457)
T PRK05639 248 LKKLLDEHGILLVMDEVQTGIGRTGK------WFASEWFEV-K-PDLIIF--GKGVASGMGLSGVIGRKE-LMD-LTS-- 313 (457)
T ss_pred HHHHHHHcCCEEEEechhhccCcCch------HHHHHhcCC-C-CCEEEe--chhhcCCCcceeEEehHH-HHh-hcC--
Confidence 99999999999988 4433211111 000111234 3 798884 788876566788888764 332 111
Q ss_pred CCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC-CCcEEEcc-CCCc
Q psy1785 468 ASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR-PGFKLVLD-EPEC 545 (629)
Q Consensus 468 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~-~g~~l~~~-~p~~ 545 (629)
..++. |. .+.+......-.+++.+..++ .+++..++.++|++.|+++ .++.++.+ .-.-
T Consensus 314 ~~~~~---------------T~-~g~p~~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~G 374 (457)
T PRK05639 314 GSALL---------------TP-AANPVISAAAEATLEIIEEEN---LLKNALKVGEFIKKRLLEMKESFEVIGDVRGKG 374 (457)
T ss_pred CCccc---------------CC-CcCHHHHHHHHHHHHHHHHcc---HHHHHHHHHHHHHHHHHHHHHhCCCEEeeccce
Confidence 01110 11 223333344445566555544 4455666888888888763 12333320 0111
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..+.+.+.++... . +. .....+.+.+.++|.++ ..... ..+.+|+... ...|++|||.+++.+++.
T Consensus 375 l~~gve~~~~~~~--~-~~-------~~~~~~~~~~~~~Gv~~-~~~g~--~~~~lr~~Pp-l~it~~~id~~~~~l~~~ 440 (457)
T PRK05639 375 LMIGVEIVKENGK--P-DP-------ELTGKICWRAFELGLIL-PSYGM--FGNVIRITPP-LVITKEIAEKGLEIMERA 440 (457)
T ss_pred eEEEEEEecCCCC--C-CH-------HHHHHHHHHHHhCCeEE-eecCC--CCCEEEEeCC-CccCHHHHHHHHHHHHHH
Confidence 2233333322111 0 11 12346778888999654 32211 1368999995 889999999999999887
Q ss_pred hh
Q psy1785 626 GH 627 (629)
Q Consensus 626 ~~ 627 (629)
.+
T Consensus 441 l~ 442 (457)
T PRK05639 441 IK 442 (457)
T ss_pred HH
Confidence 54
No 315
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.68 E-value=5.5e-05 Score=83.52 Aligned_cols=312 Identities=14% Similarity=0.120 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC---
Q psy1785 259 EEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL--- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl--- 334 (629)
+.++.+.+++++.-.. ....|+++||+||..|++.||... | .+.+|...+.-|-...-+..+.+.
T Consensus 87 ~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~t-------g----r~~ii~~~~~YHG~t~~als~s~~~~~ 155 (445)
T PRK08593 87 LVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYT-------G----RPYIISFTNAYHGSTYGSLSMSGISLN 155 (445)
T ss_pred HHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhh-------C----CCeEEEECCCcCCCcHHHHhhcCCCcc
Confidence 3445556777663221 367899999999999999998751 2 233555666677765545444331
Q ss_pred -------CCCCEEEEecCCCC-----CCCHH-------HHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHH
Q psy1785 335 -------GSDNVYLIKTDARG-----RMLPE-------SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIA 391 (629)
Q Consensus 335 -------g~~~v~~V~~d~~g-----~~d~~-------~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~ 391 (629)
....+..+|..+.. ..+.+ .+++.++.... ......|+.---....|.+-| +++++
T Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iAavI~EPv~g~gG~~~~~~~yl~~l~ 234 (445)
T PRK08593 156 MRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLP-ADEVACIVIETIQGDGGLLEPVPGYFEALY 234 (445)
T ss_pred cccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcC-CCceEEEEEccccCCCCCcCCCHHHHHHHH
Confidence 01235556543221 12222 23332222100 123334444434445577767 99999
Q ss_pred HHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCC
Q psy1785 392 DICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 392 ~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
++|++||+++++ .+.|.-.... +.-...+++. .|.+++ -|.++.-+..|+++.++ ++.+. +. ...
T Consensus 235 ~lc~~~g~llI~DEv~tg~GrtG~------~~a~~~~gv~--pDi~t~--gK~l~~G~p~gav~~~~-~i~~~-~~-~~~ 301 (445)
T PRK08593 235 KFCREHGILFAVDDIQQGLGRTGK------WSSISHFNIT--PDLMSF--GKSLAGGMPMSAIVGRK-EIMES-LE-APA 301 (445)
T ss_pred HHHHHcCCEEEEechhhCCCcCch------HHHHHhcCCC--CCEeee--cccccCCcccEEEEEcH-HHHhh-hc-cCC
Confidence 999999999988 5433211111 0001111332 587765 57776545578888775 33332 11 111
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCCCc-eE
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEPEC-TN 547 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p~~-~~ 547 (629)
+.. | ..+.+........+++.+-.+ +++++..++.++|++.|+++. ...++.+-.-. ..
T Consensus 302 ~~~---------------T-~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~ 362 (445)
T PRK08593 302 HLF---------------T-TGANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLS 362 (445)
T ss_pred CCC---------------C-CCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceE
Confidence 110 1 123333344445556555444 355666667777777776531 11122200011 11
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+.+.++...... + ......+...|.++|.++ .. .. .+.+|+++. ...|++|||.+++.+++..+
T Consensus 363 ~gi~l~~~~~~~~~-~-------~~~~~~~~~~~~~~Gv~~-~~--~~--~~~lr~~p~-l~~t~~~id~~~~~l~~~l~ 428 (445)
T PRK08593 363 IGIDIVSDKKLKTR-D-------NEAALKICNYCFEHGVVI-IA--VA--GNVLRFQPP-LVITYEQLDTALNTIEQAFT 428 (445)
T ss_pred EEEEEecCCCcCCC-c-------HHHHHHHHHHHHHCCeEE-ec--cC--CCEEEEECC-CccCHHHHHHHHHHHHHHHH
Confidence 22322221100000 0 112346788899999643 21 11 258999995 89999999999999988654
Q ss_pred c
Q psy1785 628 D 628 (629)
Q Consensus 628 ~ 628 (629)
+
T Consensus 429 ~ 429 (445)
T PRK08593 429 A 429 (445)
T ss_pred H
Confidence 3
No 316
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=98.68 E-value=2e-05 Score=86.88 Aligned_cols=318 Identities=13% Similarity=0.105 Sum_probs=168.1
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+.+++++.-.-....|+++||+|+..|++.||.... ..|..+. .-+|...+.-|-...-+..+.|.
T Consensus 92 ~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~----~~g~~~r-~~ii~~~~~yHG~t~gals~tg~~~~~~ 166 (442)
T PRK13360 92 FELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHR----ARGEGSR-TRLIGRERGYHGVGFGGISVGGIVPNRK 166 (442)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHH----hcCCCCC-cEEEEEcCCcCCccHhhhhccCChhhhh
Confidence 4555667776631124679999999999999999997521 1121112 23455556666643333322221
Q ss_pred --C--CCCEEEEecCCC---CCC----------CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 335 --G--SDNVYLIKTDAR---GRM----------LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 335 --g--~~~v~~V~~d~~---g~~----------d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
+ ...+..+|...+ ... ..++|++.++.. .+.....|+.---....|.+-| +++|+++
T Consensus 167 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~l 244 (442)
T PRK13360 167 AFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREI 244 (442)
T ss_pred ccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 1 123444554321 001 145666666431 1123445555544555688888 9999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
|++||+.+.+ +..|.-.....+ -....++ . .|.+++ -|.++.- +.+|.++++++ ..+. +...+..
T Consensus 245 c~~~g~llI~DEv~tG~GrtG~~~------a~~~~gv-~-PDivt~--gK~l~gG~~P~gav~~~~~-i~~~-~~~~~~~ 312 (442)
T PRK13360 245 CDKHGILLIFDEVITGFGRLGAPF------AAQYFGV-T-PDLLTC--AKGLTNGAIPMGAVFVSSE-IHDA-FMQGPEA 312 (442)
T ss_pred HHHcCCEEEEechhhCCCCCccch------hhhhcCC-C-Cceeee--eeccccCccceEEEEEcHH-HHHH-hhcCCcc
Confidence 9999999988 443321111100 0111234 2 687766 6887632 23677777663 3322 2111100
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCC-ce-EE
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPE-CT-NI 548 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~-~~-~v 548 (629)
. ..+ ....|. .+.+........+|+.+-.++ ..++..++.++|++.|++...+..+. +.. .+ .+
T Consensus 313 ~--------~~~-~~~~T~-~g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~-~vrG~Gl~~ 378 (442)
T PRK13360 313 G--------IEF-FHGYTY-SGHPLACAAALATLDLYEREG---LLTRAARLAPYWEDALHSLRDAPHVI-DIRNLGLVG 378 (442)
T ss_pred c--------ccc-ccCCCC-CCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCee-eeeccceEE
Confidence 0 000 000111 233434445555666665554 45666778888888887653332222 111 11 11
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.+.+... + .. ....++..+|.++|.+. .. .+ +.+|++.. ..+|++|||.+++.|++..++
T Consensus 379 ~~~l~~~~~-~---~~-------~~~~~~~~~l~~~Gvl~-~~---~~--~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~ 440 (442)
T PRK13360 379 AVELAPRDG-K---PG-------KRAYEVFLKCFEKGLMI-RY---TG--DILALSPP-LIIEEAQIDELFDILAQALKE 440 (442)
T ss_pred EEEEecCCC-C---cc-------hhHHHHHHHHHHCCcEE-Ee---cC--CEEEEeCC-CccCHHHHHHHHHHHHHHHHH
Confidence 222222110 0 00 11235677888899643 21 12 47999985 889999999999999887654
No 317
>PRK05965 hypothetical protein; Provisional
Probab=98.68 E-value=5.6e-05 Score=83.72 Aligned_cols=325 Identities=14% Similarity=0.057 Sum_probs=167.2
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+.+++++.-+-....|+.+||+|+..|++.||... +..|.+.. ..+|...+.-|-...-+..+.|.
T Consensus 93 ~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~----~~~g~~~r-~kii~~~~~YHG~t~~a~s~t~~~~~~~ 167 (459)
T PRK05965 93 IRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYW----NATGRPSK-KQFISLERGYHGSSSVGAGLTALPAFHR 167 (459)
T ss_pred HHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHH----HhcCCCCc-cEEEEecCCcCcccHHHHHhcCCchhhc
Confidence 445556666653222468999999999999999999752 12242222 23555666667654433333221
Q ss_pred --C--CCCEEEEecCCCCC----CCH--------HHHHHHHHHHHhCC-CCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 335 --G--SDNVYLIKTDARGR----MLP--------ESLRGEIQRTLAEG-AVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 335 --g--~~~v~~V~~d~~g~----~d~--------~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
| ...+..+|.....+ -|. ++|++.|+. ++ .....|++---....|.+-| +++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~l 244 (459)
T PRK05965 168 GFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAE---LGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREA 244 (459)
T ss_pred ccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHh---cCCCceEEEEEeccccCCCCccCCHHHHHHHHHH
Confidence 1 12344554321111 132 455555543 22 23334444322233344433 7899999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
|++||+.+++ ...|.-.... +.-..++|++ .|.+++ -|.++.-+ ..|.++++++ +... +......
T Consensus 245 c~~~gillI~DEV~tGfGRtG~------~~a~~~~gv~--PDiv~~--gKgl~gG~~Pi~av~~~~~-i~~~-~~~~~~~ 312 (459)
T PRK05965 245 CRELGILFVADEVITGFGRTGP------LFACEAEGVV--PDLMTV--AKGLTSGYVPMGAVLMSDH-VYQG-IADGAGA 312 (459)
T ss_pred HHHcCCEEEEechhccCccCch------hhhHhhcCCC--CCeEEe--chhhccCCcceeEEEEcHH-HHHH-Hhccccc
Confidence 9999999998 3222211111 0011122342 689888 47776553 5788888764 3322 2111000
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEE
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNIS 549 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~ 549 (629)
. . .....+ | -.+.+........+|+.+-.++ .+++..++.++|.+.|++.....++.+ .-.-..+.
T Consensus 313 ~----~---~~~h~~--T-~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~g 379 (459)
T PRK05965 313 A----A---PVGHGY--T-YSAHPVSAAVGLEVLRLYHEGG---LLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGA 379 (459)
T ss_pred c----c---cccccC--C-CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEE
Confidence 0 0 000000 1 1233444444555566665554 445666788888888876532222220 01112223
Q ss_pred EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 550 FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 550 F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+.+..+..... ..+.. ..+...+.+.+.++|.++ . +. + .+++|+... ...|++|||.+++.+++..++
T Consensus 380 ie~~~~~~~~~--~~~~~---~~~~~~i~~~~~~~Gll~-~--~~-g-~~~i~~~Pp-L~it~~ei~~~~~~l~~~l~~ 447 (459)
T PRK05965 380 LELVADKATKT--PFDAA---LDPADRIFDRAYANGLVF-R--AF-G-DGVLGFAPA-LCCTEGEFDLIFERTRKTLDD 447 (459)
T ss_pred EEEeccccccC--CCCch---hHHHHHHHHHHHhCCeEE-E--ec-C-CcEEEEECC-CcCCHHHHHHHHHHHHHHHHH
Confidence 33322110000 00000 112346788889999654 2 22 2 257999985 788999999999999876543
No 318
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.66 E-value=3.7e-05 Score=84.50 Aligned_cols=306 Identities=12% Similarity=0.107 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC---
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG--- 335 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg--- 335 (629)
+.++.+.+.+++.. .....|+.+||+|+..|++.||... | ...+|...+.-|-...-+....|-+
T Consensus 95 ~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~t-------g----r~~ii~~~~~yHG~t~~~~~~~~~~~~~ 162 (428)
T PRK12389 95 EIEFAKMLKEAIPS-LEKVRFVNSGTEAVMTTIRVARAYT-------G----RTKIIKFAGCYHGHSDLVLVAAGSGPST 162 (428)
T ss_pred HHHHHHHHHHhCCC-CcEEEEeCCHHHHHHHHHHHHHHhh-------C----CCEEEEECCCcCCChHHHHHhcCCcccc
Confidence 34555566666531 2468999999999999999999751 2 2335555666676544443332210
Q ss_pred -------------CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcC
Q psy1785 336 -------------SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYD 398 (629)
Q Consensus 336 -------------~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~ 398 (629)
..++..+|.+ |++.|++.+++. +.....|+.---....|.+-| +++++++|++||
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~-----d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g 234 (428)
T PRK12389 163 LGTPDSAGVPKSIAQEVITVPFN-----DIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAG 234 (428)
T ss_pred cCCCCCCCCCCcccCceEEcCCC-----CHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 1133344332 688898888642 223445555444555688888 999999999999
Q ss_pred CeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcC-CCCccccCC
Q psy1785 399 MADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSA-SASYLFQKD 475 (629)
Q Consensus 399 ~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~-~~~yl~~~~ 475 (629)
+.+++ ...|. -... .+ ...++|+ . .|.+++ -|.++.-+..|.++.++ +... .+.. ...+..
T Consensus 235 ~llI~DEV~tG~-Rt~~--~~----a~~~~gv-~-PDivt~--gK~lggG~Pi~av~~~~-~i~~-~~~~~~~~~~~--- 298 (428)
T PRK12389 235 ALVIYDEVITAF-RFMY--GG----AQDLLGV-E-PDLTAL--GKIIGGGLPIGAYGGRK-DIME-QVAPLGPAYQA--- 298 (428)
T ss_pred CEEEEEcccccc-ccCc--ch----hhHHhCC-C-CCeeee--chhhcCCCceeEEeEHH-HHHh-hhccCCCcccc---
Confidence 99988 44443 1110 00 0111234 2 687765 68887656678887765 3332 2210 000110
Q ss_pred cCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc----CCC-cEEEccCCCceEEEE
Q psy1785 476 KFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH----RPG-FKLVLDEPECTNISF 550 (629)
Q Consensus 476 ~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~----~~g-~~l~~~~p~~~~v~F 550 (629)
+ | -.+.+........+|+.+..++ ..++..++.++|++.|++ .+- .++.. -. +.+.+
T Consensus 299 ---------~--T-~~gnpl~~Aaala~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r-~~--g~~gi 360 (428)
T PRK12389 299 ---------G--T-MAGNPASMAAGIACLEVLQQEG---VYEKLDRLGAMLEEGILEAAEKHGITITINR-LK--GALTV 360 (428)
T ss_pred ---------c--C-CccCHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCEEEEe-cC--cEEEE
Confidence 0 1 1233334444555666665554 456677788888888875 321 12212 11 12223
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
.+......... +....-......+.+.|.++|.++ ... +.. .+ .+. ...|++|||++++.+++..+++
T Consensus 361 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~~~-~~--~~~-l~~t~e~id~~~~~l~~~l~~~ 428 (428)
T PRK12389 361 YFTDEKVTNYD---QAERSDGEAFGKFFKLMLNQGINL-APS---KYE-AW--FLT-TAHTEEDIEETLEAVDRAFAQL 428 (428)
T ss_pred EEeCCCCCChh---hhcccCHHHHHHHHHHHHHCCcEe-ecC---CCC-Ce--eec-CCCCHHHHHHHHHHHHHHHHhC
Confidence 22211110000 000000112346778899999643 221 111 23 243 6789999999999999876653
No 319
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=98.65 E-value=2.6e-05 Score=83.24 Aligned_cols=285 Identities=10% Similarity=0.121 Sum_probs=179.0
Q ss_pred HHHHHHHHHHhC-CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVG-FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G-~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.+..+.+++..| .+........|.++.....+.+.+. |...|+++.-+.......++..|. +
T Consensus 60 ~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~--------------~gd~vl~~~Ptf~~Y~~~a~~~g~---~ 122 (356)
T COG0079 60 RELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVE--------------PGDTVLIPEPTFSMYEIAAQLAGA---E 122 (356)
T ss_pred HHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhc--------------CCCEEEEcCCChHHHHHHHHhcCC---e
Confidence 555667888888 5555666677776665444443322 333455565655556667889998 9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--CCeEEE--ecCcccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--DMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~~~lhV--A~gg~~l~~~~ 414 (629)
++.||.++ +.+|++.+.+.+.+ .+-+|..+..++-+|..-+.++|.++++.. +.++.| ||.-+.-.+.
T Consensus 123 ~~~v~~~~-~~~d~~~~~~~~~~------~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~- 194 (356)
T COG0079 123 VVKVPLKE-FRLDLDAILAAIRD------KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESS- 194 (356)
T ss_pred EEEecccc-cccCHHHHHHhhhc------CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchh-
Confidence 99999988 99999998888876 244788888999999999999999988865 668877 7654332100
Q ss_pred ccccccccccccccCCcce--EEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVAD--SVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 491 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaD--sv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 491 (629)
.. . +.. -+ .+.=++.|.++.+- =+|. .+.+++++........+|-
T Consensus 195 --~~-l-------~~~-~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~-------------------- 242 (356)
T COG0079 195 --LE-L-------LKY-PPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFN-------------------- 242 (356)
T ss_pred --hh-h-------ccC-CCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCC--------------------
Confidence 00 0 011 12 45567788776553 3676 4445555554333222221
Q ss_pred CCCcchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 492 GRKPDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 492 sr~~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
...+...++..++.. +-+++.+++..+-++++.+.|++++ +.-+. +...|-|.++. +..
T Consensus 243 ---v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~-pS~aNFvlv~~-~~~-------------- 302 (356)
T COG0079 243 ---VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVF-PSQANFVLVRV-PDA-------------- 302 (356)
T ss_pred ---CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeec-CCCCcEEEEEC-CCc--------------
Confidence 123333444443332 4567778888889999999999985 55233 33333333443 211
Q ss_pred hhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 571 HKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 571 ~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
. ...+.+.|.++|.+.=.........+++|+++. |+++.++++++|+++..
T Consensus 303 -~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~ 353 (356)
T COG0079 303 -E-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLK 353 (356)
T ss_pred -c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHh
Confidence 0 125678888899654222121223359999998 78888999999988754
No 320
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.65 E-value=1.1e-05 Score=88.47 Aligned_cols=310 Identities=13% Similarity=0.102 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH---HHHHHHcCC
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI---KKLAAFEGL 334 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si---~kaa~~lGl 334 (629)
.+.++.+.+.++++.......|+.+||+|+..|++.||... | . ..++...+.-|-.. ..+....+-
T Consensus 94 ~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~t-------g---r-~~ii~~~~~yHG~td~~~~~~~~~~~ 162 (433)
T PRK00615 94 QEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGIT-------G---R-SIIIKFLGCYHGHADTLLQGISFSET 162 (433)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhh-------C---C-CEEEEEcCccCCCCcccCcccccCCC
Confidence 34556667777775433478999999999999999999751 2 1 23444455555532 111111110
Q ss_pred CCC-------------CEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH----HHHHHHHHHc
Q psy1785 335 GSD-------------NVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI----PAIADICAEY 397 (629)
Q Consensus 335 g~~-------------~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl----~ei~~i~~~~ 397 (629)
..+ ....++ .-|+++|++.+++. +.....|+.--..+..|.+-|. ++|+++|++|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~ 234 (433)
T PRK00615 163 SLDTLTHLVDTDLAHPLTLSLP-----YNDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRT 234 (433)
T ss_pred CcCcCCCCCCCCCCCCCeEeCC-----CCCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHc
Confidence 000 011111 12678888888642 2233445555445555777664 4999999999
Q ss_pred CCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCC
Q psy1785 398 DMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKD 475 (629)
Q Consensus 398 ~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~ 475 (629)
|+.+++ +..|. -... . + ...+.++ . .|.+++ -|.++.-+..|+++.+++ ..... ... .+.+.
T Consensus 235 g~llI~DEv~tG~-R~G~-~----g-a~~~~gv-~-PDi~~~--gK~lggG~p~~av~~~~~-i~~~~-~~~-~~~~~-- 298 (433)
T PRK00615 235 GSLSIMDEVVTGF-RVAQ-G----G-AAAIYHV-K-PDITVY--GKILGGGLPAAAVVAHKS-IMDHL-APE-GTIFQ-- 298 (433)
T ss_pred CCEEEEEcccccc-cccH-h----H-HHHhcCC-C-CCeEEE--cccccCCcceeeeeecHH-HHhhh-cCC-CCccc--
Confidence 999988 54332 1111 0 0 0111234 2 688774 788875455788888663 33221 100 11110
Q ss_pred cCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC---CCcEEEccCCCceEEEEEe
Q psy1785 476 KFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR---PGFKLVLDEPECTNISFWY 552 (629)
Q Consensus 476 ~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~---~g~~l~~~~p~~~~v~F~~ 552 (629)
.+ | -.+.+..+.....+|+.+..+. ..++..++.++|.++|++. .|+.+.. ...-..+.+.+
T Consensus 299 --------~~--T-~~g~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~-~r~G~~~~i~~ 363 (433)
T PRK00615 299 --------AG--T-LSGNPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSL-VRYGSMFSFFF 363 (433)
T ss_pred --------CC--C-CcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEE-EeeceEEEEEE
Confidence 00 0 1223334455555666665444 3556666777776665542 1343221 11112233333
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.....+... +....-.++...+...|.++|.++ ..... +. ..+ +...|++|||++++++++..++
T Consensus 364 ~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~Gv~~-~~~~~---~~---~~l-s~~ht~~did~~~~a~~~~~~~ 428 (433)
T PRK00615 364 NENRPNNLA---EAQLSDIEAFQTFYQSAFSKGVYL-SPSPF---EA---SFL-SSAHSMENLDYAQNVLIDSLEK 428 (433)
T ss_pred eCCCCCChH---HHhhCCHHHHHHHHHHHHHCCeee-cCccc---cc---cce-ecCCCHHHHHHHHHHHHHHHHH
Confidence 221111000 000000123356888999999543 22111 11 134 3777999999999999998765
No 321
>PLN00144 acetylornithine transaminase
Probab=98.64 E-value=1.7e-05 Score=85.84 Aligned_cols=296 Identities=15% Similarity=0.079 Sum_probs=156.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCC------CCeEEEEcCCcchHHHHHHHHcC
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASC------PRLVLYTSEDAHYSIKKLAAFEG 333 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~------p~~vv~~s~~~H~Si~kaa~~lG 333 (629)
.++.+.++++.+. ....|+++||+|+..|++.||.... +.|.... ...++...+.-|-...-+..+.+
T Consensus 60 ~~la~~l~~~~~~--~~v~f~~sGseA~e~AlklAr~~~~----~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~ 133 (382)
T PLN00144 60 VELAKRLVASSFA--DRVFFCNSGTEANEAAIKFARKYQR----VRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTS 133 (382)
T ss_pred HHHHHHHHhcCCC--CeEEEeCCcHHHHHHHHHHHHHHHh----ccCCCCccccccccceEEEECCCcccccHHHHhcCC
Confidence 3444555665543 3689999999999999999987521 1111000 12355566667765544444333
Q ss_pred C---------CCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEe--eCCCccccccC--HHHHHHHHHHcCCe
Q psy1785 334 L---------GSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSAT--SGTTVLGAFDP--IPAIADICAEYDMA 400 (629)
Q Consensus 334 l---------g~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat--~Gtt~~G~idp--l~ei~~i~~~~~~~ 400 (629)
- +...+..+|. -|++.|++.+.. + .+..|+.. .|+...-..++ +++++++|++|+++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~~~~----~-~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~l 203 (382)
T PLN00144 134 KEQYRTPFEPLMPGVTFVEY-----GNLEAARKLIQK----G-KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGAL 203 (382)
T ss_pred CccccccCCCCCCCeEEeCC-----CCHHHHHHhcCC----C-CeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1 1123444443 268888877632 2 23333333 33322222345 89999999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
+++ .+.+......++-+ ++. ++. .|.+++ -|.++.-+..|.++.+++ +... +.. .. .
T Consensus 204 lI~DEv~tg~gr~g~~~~~----~~~--~~~--PDi~t~--sK~l~~G~pig~v~~~~~-~~~~-~~~---~~-~----- 262 (382)
T PLN00144 204 LVFDEVQCGLGRTGYLWAH----EAY--GVE--PDIMTL--AKPLAGGLPIGAVLVTEK-VASA-INP---GD-H----- 262 (382)
T ss_pred EEEechhhCCCccchHhhh----hhc--CCC--CCEEEe--cccccCCcceEEEEEcHH-HHhc-cCC---CC-C-----
Confidence 998 55443221110000 111 232 564444 688876677888888653 3322 110 00 0
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHH----hcCCCcEEEccCCCceEEEEEeeC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKI----RHRPGFKLVLDEPECTNISFWYIP 554 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L----~~~~g~~l~~~~p~~~~v~F~~~p 554 (629)
.. |. .+.+.....+..+++.+-...+.+++++ +.++|++.| .+.|.+.-+. ..-..+.+.+.
T Consensus 263 -----~~--T~-~~~pl~~aaa~a~l~~i~~~~~~~~~~~---~g~~l~~~l~~~~~~~~~~~~vr--g~G~~~~l~l~- 328 (382)
T PLN00144 263 -----GS--TF-AGGPLVCNAALAVLDKISKPGFLASVAK---KGEYLRELLRRKLGGNPHVKEVR--GVGLLVGIQLD- 328 (382)
T ss_pred -----CC--CC-CCCHHHHHHHHHHHHHHhhchHHHHHHH---HHHHHHHHHHHHHhhCCCceeee--cCceEEEEEec-
Confidence 00 11 2223334444555566655555544443 444444444 3443322121 11111222221
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.. ...+.+++.++|.++... +..++||+++. ...+++||+..++.|+++..+
T Consensus 329 --~~---------------~~~~~~~~~~~Gv~i~~~----~~~~~lrl~p~-~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 329 --VP---------------AGPLVDACRDSGLLVLTA----GKGDVVRLVPP-LVISEAELEQAVEILADCLPA 380 (382)
T ss_pred --Cc---------------cHHHHHHHHHCCeEEeec----CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHh
Confidence 00 135677888999754321 21368999995 658899999999999987654
No 322
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.64 E-value=1.2e-05 Score=88.37 Aligned_cols=308 Identities=12% Similarity=0.086 Sum_probs=164.1
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCC--
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGS-- 336 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~-- 336 (629)
+.++.+++++++.. .....|+.+|++||..|+..|+... | ...+|.....-|-...-+....|-+.
T Consensus 92 ~~~la~~L~~~~~~-~~~v~~~~sGseA~e~Aik~a~~~~-------g----~~~ii~~~~~yHG~t~~~~~~~~~~~~~ 159 (426)
T PRK00062 92 EVELAELVIELVPS-IEMVRMVNSGTEATMSAIRLARGYT-------G----RDKIIKFEGCYHGHADSLLVKAGSGAAT 159 (426)
T ss_pred HHHHHHHHHHhCCC-CCEEEEecCHHHHHHHHHHHHHHHh-------C----CCeEEEEcCccCCchhhhhhccCccccc
Confidence 34556666666531 2468899999999999999998751 2 23456666667765433322211100
Q ss_pred ---C-----------CEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcC
Q psy1785 337 ---D-----------NVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYD 398 (629)
Q Consensus 337 ---~-----------~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~ 398 (629)
. .+..+| .-|+++|++.+... +.....|+..-..+..|.+-| +++|+++|++|+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~ 231 (426)
T PRK00062 160 LGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHG 231 (426)
T ss_pred cCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 0 011111 13788898888642 223344555544555788877 999999999999
Q ss_pred CeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 399 MADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 399 ~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
+++.+ ++.|. ...... -...+++ . .|.++ ..|.++.-+..|.+++++ ++..........|..
T Consensus 232 ~llI~DEv~~G~-r~g~~~------~~~~~~~-~-pDi~~--~gK~l~~G~p~ga~~~~~-~i~~~~~~~~~~~~~---- 295 (426)
T PRK00062 232 ALLIFDEVMTGF-RVALGG------AQGYYGV-T-PDLTT--LGKIIGGGLPVGAFGGRR-EIMEQLAPLGPVYQA---- 295 (426)
T ss_pred CEEEEeechhcc-ccCCcc------HHHHhCC-C-cchHh--hhhHhhCCCcceeeeEHH-HHHHhhccCCCceec----
Confidence 99988 65543 221100 0011122 1 45443 468887544467776654 343321100011110
Q ss_pred CCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC---CCcEEEccCCCceEEEEEee
Q psy1785 477 FYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR---PGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~---~g~~l~~~~p~~~~v~F~~~ 553 (629)
+..++.+.....+..+++.+..+ +..++..++.+++++.|++. -++..-. ...-.++.+.+.
T Consensus 296 -----------~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v-rg~G~~~~i~l~ 360 (426)
T PRK00062 296 -----------GTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAGIPLTV-NRVGSMFGLFFT 360 (426)
T ss_pred -----------ccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcCCceEE-EEecceEEEEEe
Confidence 01133344455555666665444 45666677777777777642 1333211 123333444443
Q ss_pred CCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 554 PPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 554 p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
++..+....... . -......+.+.|.++|.+ +... + .+.+|++ ...|++|||.+++.++++.+.
T Consensus 361 ~~~~~~~~~~~~-~--~~~~~~~i~~~l~~~Gv~-v~~~---~-~~~~~~~---~~~t~~ei~~~~~~l~~~l~~ 424 (426)
T PRK00062 361 DEPVTNYADAKK-S--DTERFARFFHAMLDEGVY-LAPS---Q-FEAGFVS---AAHTDEDIEKTLEAARKAFAA 424 (426)
T ss_pred cCCCcchhhhcc-c--cHHHHHHHHHHHHHCCeE-eecC---C-cCceeee---ccCCHHHHHHHHHHHHHHHHh
Confidence 221110000000 0 011234678889999954 3321 1 1245543 678999999999999887654
No 323
>PRK07036 hypothetical protein; Provisional
Probab=98.64 E-value=7.8e-05 Score=82.72 Aligned_cols=322 Identities=14% Similarity=0.119 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC--
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG-- 335 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg-- 335 (629)
.+.++.+.+.+++.-+-....|+++||+|+..|++.||... ...|.++. ..++...+.-|-...-+..+.|..
T Consensus 96 ~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~----~~~g~t~r-~~Ii~~~~~YHG~t~~a~s~~~~~~~ 170 (466)
T PRK07036 96 PAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYF----NVRGRPAK-KHIITRGDAYHGSTYLTASLTGKAAD 170 (466)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHH----HhcCCCCc-cEEEEEcCccCCccHhhhcccCCCcc
Confidence 34555566666653222468999999999999999998642 11232112 234555566666543333332211
Q ss_pred -------CCCEEEEecCCC----CCCC--------HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHH
Q psy1785 336 -------SDNVYLIKTDAR----GRML--------PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIAD 392 (629)
Q Consensus 336 -------~~~v~~V~~d~~----g~~d--------~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~ 392 (629)
...+..+|.... ..+. ++.+++.|.. ..+...-.|++--.....|.+-| ++++++
T Consensus 171 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~ 248 (466)
T PRK07036 171 RTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMRE 248 (466)
T ss_pred cccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHH
Confidence 113444543221 1111 2334444432 12234445555544555577777 999999
Q ss_pred HHHHcCCeEEE--ecCcccccccccccccccccc-ccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCC-
Q psy1785 393 ICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRR-NYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSAS- 467 (629)
Q Consensus 393 i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~-~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~- 467 (629)
+|++||+.+++ ...|.-.....+ -.. .+|++ .|.+++ -|.++.-+ ++|.++++++ +.+. +...
T Consensus 249 lc~~~g~llI~DEV~tGfGRtG~~~------~~~~~~gv~--PDivt~--gK~l~gG~~Pi~av~~~~~-i~~~-~~~~~ 316 (466)
T PRK07036 249 ICRRYDILYISDEVVTGFGRLGHFF------ASEAVFGIQ--PDIITF--AKGLTSGYQPLGAVIISER-LLDV-ISGPN 316 (466)
T ss_pred HHHHcCCEEEEeechhCCCcCchhh------hhhhhcCCC--CCEEEE--ccccccCccccEEEEEcHH-HHHH-Hhccc
Confidence 99999999988 433321111100 011 12342 688887 58776642 5788888763 3332 2110
Q ss_pred -CC--ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CC
Q psy1785 468 -AS--YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EP 543 (629)
Q Consensus 468 -~~--yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p 543 (629)
.. |.. .. | -.+.+......-.+|+.+..++ +.++..++.++|++.|+++....++.+ .-
T Consensus 317 ~~~~~~~~-----------~~--T-~~gnpl~~aaa~a~Le~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG 379 (466)
T PRK07036 317 AKGNVFTH-----------GF--T-YSGHPVACAAALKNIEIMEREG---LCEHVREVGPYFEERLASLRELPLVGDVRG 379 (466)
T ss_pred CcCccccc-----------CC--C-CCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 00 110 00 1 1233333444444555554443 556677788888888866432222220 01
Q ss_pred CceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 544 ECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 544 ~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.-..+.+.+..+..+.. ..... ..+...+.+.+.++|.++ . +. + +.+|++.. ..+|++|||.+++.++
T Consensus 380 ~Gl~~~ve~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~Gvl~-~--~~-~--~~~~l~Pp-l~it~~~id~~~~~l~ 447 (466)
T PRK07036 380 DHLMACVECVADKGSKA--LLPED---IAIGQRIDRHCQERGLLV-R--PL-E--HLCVLSPP-LIITRAQIDEIVAILR 447 (466)
T ss_pred eceEEEEEEccCccccC--CCCch---hHHHHHHHHHHHHCCcEE-e--ec-C--CEEEEeCC-CcCCHHHHHHHHHHHH
Confidence 11223333322111100 00000 112346778899999654 2 11 2 46888774 6679999999999997
Q ss_pred HHhh
Q psy1785 624 RLGH 627 (629)
Q Consensus 624 ~l~~ 627 (629)
+..+
T Consensus 448 ~al~ 451 (466)
T PRK07036 448 AAIE 451 (466)
T ss_pred HHHH
Confidence 6543
No 324
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.64 E-value=3.3e-05 Score=85.59 Aligned_cols=311 Identities=13% Similarity=0.099 Sum_probs=164.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH--c--
Q psy1785 257 LMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF--E-- 332 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~--l-- 332 (629)
..+.++.+++++.+.. .....|+.+||+|+..|++.||..- | .++ +|...+.-|-........ .
T Consensus 139 ~~~~~lAe~l~~~~p~-~~~v~f~~SGsEA~e~AlklAR~~t-------g---r~~-Ii~~~g~YHG~~~~~~~~~~~~~ 206 (474)
T PLN02482 139 LLENVLAEMVIDAVPS-VEMVRFVNSGTEACMGVLRLARAYT-------G---REK-IIKFEGCYHGHADSFLVKAGSGV 206 (474)
T ss_pred HHHHHHHHHHHHhCCC-CCEEEEeCChHHHHHHHHHHHHHhc-------C---CCE-EEEECCccCCCcchhhhhcCCCc
Confidence 4456667777777642 2478999999999999999999751 2 222 344455556532211110 0
Q ss_pred ---------CCC---CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q psy1785 333 ---------GLG---SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAE 396 (629)
Q Consensus 333 ---------Glg---~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~ 396 (629)
|+. ..++..+|.+ |+++|++.+++ .+.....|+.---....|.+-| +++++++|++
T Consensus 207 ~~~~~~~~~g~~~~~~~~~~~~~~n-----d~~~l~~~l~~---~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~ 278 (474)
T PLN02482 207 ATLGLPDSPGVPKAATSATLTAPYN-----DLEAVKKLFEA---NKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKE 278 (474)
T ss_pred cccCCCCCCCCCCCCCCCeEEecCC-----ChHHHHHHHHh---CCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 110 0123334332 78889888864 2223445555544555676766 4579999999
Q ss_pred cCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 397 YDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 397 ~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
||+.+++ ..-|. .... . + -...+|+ . .|.+++ -|.++.-+.+|.+..++ ++..........|.
T Consensus 279 ~g~lLI~DEV~tGf-R~g~-~-g----a~~~~gv-~-PDi~t~--gK~lggG~Pigav~g~~-ei~~~~~~~~~~~~--- 343 (474)
T PLN02482 279 NGALLVFDEVMTGF-RIAY-G-G----AQEYFGI-T-PDLTTL--GKVIGGGLPVGAYGGRR-EIMEMVAPAGPMYQ--- 343 (474)
T ss_pred cCCEEEEeccccCe-ecCc-c-h----HhHHhCC-C-CCEEEe--cchhhCCCceEEEEEcH-HHHHhhccCCCccc---
Confidence 9999988 54433 2111 0 0 0111234 2 688776 68887756688887765 34332100000011
Q ss_pred CcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC---CCcEEEccCCCceEEEEE
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR---PGFKLVLDEPECTNISFW 551 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~---~g~~l~~~~p~~~~v~F~ 551 (629)
.+ |+ .+.+........+|+.+..++ ..++..++.++|++.|++. -++.++..... +.+.+.
T Consensus 344 ---------~~--T~-~gnpl~~aAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~-g~~gi~ 407 (474)
T PLN02482 344 ---------AG--TL-SGNPLAMTAGIHTLKRLQQPG---TYEYLDKITKKLIQGILEAGKKAGHEMCGGYIS-GMFGFF 407 (474)
T ss_pred ---------cc--Cc-chhHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccc-eEEEEE
Confidence 01 11 122333344555666664443 5666777888888888764 12333310211 233333
Q ss_pred eeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 552 YIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 552 ~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
+..+...... +....-.+....+.+.|.++|.++ ..... +. + .+ +...|++|||++++++++..++|
T Consensus 408 f~~~~~~~~~---~~~~~d~~~~~~~~~~l~~~Gv~~-~~~~~---~~--~-~p-sl~ht~~dId~~l~al~~~l~~~ 474 (474)
T PLN02482 408 FTEGPVYNFA---DAKKSDTAKFARFHRGMLEEGVYL-APSQF---EA--G-FT-SLAHTEEDIDFTIAAAERVLARI 474 (474)
T ss_pred EecCCccChh---hhccCCHHHHHHHHHHHHHCCeEE-eccCC---CC--C-cC-CCCCCHHHHHHHHHHHHHHHHhC
Confidence 3211111000 000000112246778889999643 22111 11 1 14 47789999999999999887654
No 325
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=98.63 E-value=2.9e-05 Score=85.67 Aligned_cols=318 Identities=12% Similarity=0.118 Sum_probs=166.6
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+.+++++.-+-....|+.+||+|+..|++.||.... ..|.... .-+|...+.-|-...-+..+.|.
T Consensus 95 ~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~----~~g~~~r-~~ii~~~~~yHG~t~gals~~~~~~~~~ 169 (445)
T PRK09221 95 FELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHR----ARGQGTR-TRLIGRERGYHGVGFGGISVGGIVNNRK 169 (445)
T ss_pred HHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHH----hcCCCCC-cEEEEECCCcCccchhhhccCCChhhhh
Confidence 4455667676632224689999999999999999997521 1121111 23455566666543333222221
Q ss_pred --C--CCCEEEEecCC---C---CCC-------CHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 335 --G--SDNVYLIKTDA---R---GRM-------LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 335 --g--~~~v~~V~~d~---~---g~~-------d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
+ ...+..+|... . +.- ..++|++.++.. .......|+.--..+..|.+-| +++++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~l 247 (445)
T PRK09221 170 MFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREI 247 (445)
T ss_pred ccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHH
Confidence 0 11344454321 0 100 134566655431 1123445555545566688888 9999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
|++||+.+++ ...|.-.....+ -...++++ .|.+++. |.++.- +..|.++.+++ .... +...+.+
T Consensus 248 c~~~g~llI~DEV~tG~GRtG~~~------~~~~~gv~--PDi~~~g--K~l~gG~~Pi~av~~~~~-i~~~-~~~~~~~ 315 (445)
T PRK09221 248 CDKHGILLIFDEVITGFGRLGAAF------AAERFGVT--PDIITFA--KGLTNGAIPMGAVIASDE-IYDA-FMQGPEY 315 (445)
T ss_pred HHHcCCEEEEeehhhCCCcCchhh------HHHhcCCC--CCEEEec--cccccCcccceeeEEcHH-HHHh-hccCccc
Confidence 9999999988 443321111100 01111232 5877765 655422 22566777653 3332 2111111
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC-Cce-EE
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP-ECT-NI 548 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p-~~~-~v 548 (629)
... + ....|. .+.+........+|+.+-.++ ++++..++.++|++.|+++.++..+. +. ..+ ..
T Consensus 316 ~~~--------~-~~~~T~-~~~pl~~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~-~vrg~Gl~~ 381 (445)
T PRK09221 316 AIE--------F-FHGYTY-SAHPVACAAGLATLDIYREED---LFERAAELAPYFEDAVHSLKGLPHVI-DIRNIGLVA 381 (445)
T ss_pred ccc--------c-ccccCC-CcCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhhccCCCEE-EEecCceEE
Confidence 000 0 000111 133333333345566554444 46777889999999988764332222 11 111 12
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.+.+... + . . .....+.+++.++|.+. .. .+ +.+|++.. ...|++|||.+++.|++...+
T Consensus 382 ~v~~~~~~~-~---~-~------~~~~~~~~~~~~~Gv~~-~~---~~--~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~ 443 (445)
T PRK09221 382 GIELAPRPG-A---P-G------ARGYEAFMKCFEKGLLV-RY---TG--DTIALSPP-LIIEKAQIDELVDALGDALRA 443 (445)
T ss_pred EEEEecccc-c---c-c------chHHHHHHHHHHCCeEE-ee---cC--CEEEEECC-ccCCHHHHHHHHHHHHHHHHh
Confidence 233322110 0 0 0 01235678888999543 21 12 57999985 889999999999999887654
No 326
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.63 E-value=4.4e-05 Score=84.58 Aligned_cols=310 Identities=11% Similarity=0.101 Sum_probs=181.5
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCCC--CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQG--GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~~--~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
.+....+...+=..+.+++....|+.. .+.++|+|...+.......-. .|...|++-.-+++..
T Consensus 127 ~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~--------------~pGd~v~vE~PtY~~~ 192 (459)
T COG1167 127 QYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLL--------------DPGDTVLVEDPTYPGA 192 (459)
T ss_pred cCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhC--------------CCCCEEEEcCCCcHHH
Confidence 344445555555666666765666654 478888888877553332211 2667888899999999
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHH---HHHHHHHHcCCeEE
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIP---AIADICAEYDMADS 402 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~---ei~~i~~~~~~~lh 402 (629)
..+.+.+|+ +++.||+|++ -||+++|++.++.. ..-++.+.....+-+|..-+++ +|.++|++|++|++
T Consensus 193 ~~~~~~~g~---~~~~vp~d~~-G~~~e~le~~~~~~----~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~II 264 (459)
T COG1167 193 LQALEALGA---RVIPVPVDED-GIDPEALEEALAQW----KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLII 264 (459)
T ss_pred HHHHHHcCC---cEEecCCCCC-CCCHHHHHHHHhhc----CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEE
Confidence 999999999 9999999854 58999999988763 2234444455667777776655 77888999999998
Q ss_pred E--ecCccccccccccccccccccccccCC-cceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCC
Q psy1785 403 V--TWNPHKLLTAPQQCSVFLTRRNYVIEV-VADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYD 479 (629)
Q Consensus 403 V--A~gg~~l~~~~~~~~~~l~~~~~~i~~-gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~ 479 (629)
= .++-...-..|.. . ... +.. +==....++.|.+..-+-+|.+..-. .+.+...... ... +
T Consensus 265 EDD~y~el~~~~~p~~--~---l~~--ld~~~rViy~gSFSK~l~PglRlG~vv~p~-~~~~~~~~~k-~~~---~---- 328 (459)
T COG1167 265 EDDYYGELRYDGPPPP--P---LKA--LDAPGRVIYLGSFSKTLAPGLRLGYVVAPP-ELIEKLLRLK-QAA---D---- 328 (459)
T ss_pred eeCcchhhhcCCCCCC--C---hHh--hCCCCCEEEEeeehhhcccccceeeeeCCH-HHHHHHHHHH-HHh---c----
Confidence 7 4443322211110 0 010 111 12356788899998878899888754 3333211100 000 0
Q ss_pred cccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHH----HHHHHHHHHHhcCCC-cEEEccCCCceEEEEEe-e
Q psy1785 480 TKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSF----DNAKYFTDKIRHRPG-FKLVLDEPECTNISFWY-I 553 (629)
Q Consensus 480 ~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~----~la~~l~~~L~~~~g-~~l~~~~p~~~~v~F~~-~ 553 (629)
..+....-..+...|. -| ++.+++++.. +..+.+.+.|++..+ ...+. .|.-+.+ +|+ .
T Consensus 329 ----------~~~s~~~Q~~la~~l~-~G--~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~-~p~gG~f-lwl~l 393 (459)
T COG1167 329 ----------LGPSSLSQAALAAFLL-SG--HYDRHLRRLRREYARRRDALLEALAEYLPELATWT-RPEGGLF-LWLEL 393 (459)
T ss_pred ----------CCCChHHHHHHHHHHH-cC--CHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeee-cCCceEE-EEEEc
Confidence 0111111122222222 22 4555544443 345666777777532 32333 4655543 343 2
Q ss_pred CCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEe-eeecC--C-ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 554 PPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMIT-YQPIH--A-LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 554 p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~-~~~~~--~-~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
|++.+ ..++.++..++|..... ...+. + ..++||++++ ..+.++++..++.|.++.+
T Consensus 394 ~~~~~---------------~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s--~~~~e~i~~gi~~l~~~~~ 454 (459)
T COG1167 394 PEGID---------------ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFS--SPSEEEIEEGIKRLAALLR 454 (459)
T ss_pred CCCCC---------------HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcC--CCCHHHHHHHHHHHHHHHH
Confidence 32211 13567778888865433 22221 1 2468999996 5568888888887776654
No 327
>PLN02672 methionine S-methyltransferase
Probab=98.61 E-value=5.5e-05 Score=90.09 Aligned_cols=315 Identities=16% Similarity=0.190 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHhCCCCC---CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC
Q psy1785 259 EEHVLAQMRTIVGFQGG---DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG 335 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~---~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg 335 (629)
-..+.+|+++..|++.. +.++++|.+++...++. +.- .|...|++..-+.+....+++..|.
T Consensus 736 r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~-aLl-------------~pGD~VLVp~PtY~~Y~~~a~~~Ga- 800 (1082)
T PLN02672 736 RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVL-CCV-------------QEGGTLCFPAGSNGTYVSAAKFLKA- 800 (1082)
T ss_pred HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHH-HHc-------------CCCCEEEEeCCChHHHHHHHHHcCC-
Confidence 47778899999999763 45556555444333332 222 1444566666677778888999998
Q ss_pred CCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCC-Cccccc---cCHHHHHHHHHHcCCeEEE--ecCc
Q psy1785 336 SDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGT-TVLGAF---DPIPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 336 ~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gt-t~~G~i---dpl~ei~~i~~~~~~~lhV--A~gg 407 (629)
+++.||+++ +..+|++.|++++... ..+ .|..+..+ |-+|.+ +.+.+|.++|++|++++.+ +|..
T Consensus 801 --~vv~Vpl~~e~gf~lD~d~Le~al~~~----~~~-~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsd 873 (1082)
T PLN02672 801 --NFRRIPTKSSDGFKLTAKTLASTLETV----KKP-WVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSG 873 (1082)
T ss_pred --EEEEEecccccCCCCCHHHHHHHhccC----CCC-EEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCc
Confidence 999999974 3578999998887531 112 34455554 788887 4566777889999999988 7765
Q ss_pred cccccccc---cccccccccccccCCcce-EEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 408 HKLLTAPQ---QCSVFLTRRNYVIEVVAD-SVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 408 ~~l~~~~~---~~~~~l~~~~~~i~~gaD-sv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
..+-..+. .+...+..-. .....-. ++..++-|.++.| +-+|.++..++.+....... ..+.
T Consensus 874 L~Fd~~~~s~~sl~s~l~~~~-~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~-~~~s----------- 940 (1082)
T PLN02672 874 LEYDTSGWGGWDLKSILSRLK-SSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSA-PGLS----------- 940 (1082)
T ss_pred cccCCCCCcccchhhHHHHhc-cccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHh-hhhc-----------
Confidence 44321110 0000000000 0000001 3445778655554 45888877554344332111 0000
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcC------hhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCC
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKG------TDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPS 556 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G------~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~ 556 (629)
+.-....+.+...+.++. .+.+++..+...+..+++.+.|++. |+++. +|+-+.+ +|..+..
T Consensus 941 --------~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~v~--~PeGGFf-Lwl~l~~ 1008 (1082)
T PLN02672 941 --------RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWDVL--EPQGGIS-MVAKPSA 1008 (1082)
T ss_pred --------CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEe--cCCcEEE-EEEEccc
Confidence 000011122222222221 1234455555677788899999887 88754 4555444 4443221
Q ss_pred CCCC---CchhhH--HHHHhhHHHHHHHHHHhc-CcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 557 LRGK---EDQADF--NELLHKVAPKIKERMMKS-GSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 557 ~~~~---~~~~~~--~~~l~~~~~~i~~~l~~~-G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..+. .+..+- ...++ ..++.+.|.++ |.+ +.+...-+..+++|++++ +++++++..++.|+++.
T Consensus 1009 ~l~~~~~~~~~~~~~~~~ld--s~efae~LLee~GVa-V~PGs~FG~~g~~RIsfa---~~~e~LeeALerL~kf~ 1078 (1082)
T PLN02672 1009 YLGKTVKLKSIDGDTGIKLD--SSNIREAILKSTGLC-INSSSWTGIPGYCRFSFA---LEDSEFDRALKAIARFK 1078 (1082)
T ss_pred cccccccccccccccccCCC--HHHHHHHHHHcCCEE-EecCcccCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence 0000 000000 00011 13567777766 654 443333344579999996 37889999998888753
No 328
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=98.60 E-value=0.00017 Score=79.10 Aligned_cols=310 Identities=13% Similarity=0.104 Sum_probs=162.1
Q ss_pred HHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 260 EHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
.++.+.+++++.-+. ....|+++||+||..|++.||.. .| .+ .++...+.-|-...-+..+.|.
T Consensus 86 ~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~-------tg---r~-~ii~~~~~yHG~t~~~~~~~~~~~~~ 154 (425)
T PRK07495 86 VRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAA-------TG---RS-AVIAFGGGFHGRTFMGMSLTGKVVPY 154 (425)
T ss_pred HHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHh-------hC---CC-eEEEECCCcCCccHHHhhhcCCCccc
Confidence 445566777664221 36899999999999999999874 12 23 3555566667654333332221
Q ss_pred ----C--CCCEEEEecCCCC-CCCHH----HHHHHHHHHHhCCCCcEEEEEeeCCCcccccc----CHHHHHHHHHHcCC
Q psy1785 335 ----G--SDNVYLIKTDARG-RMLPE----SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD----PIPAIADICAEYDM 399 (629)
Q Consensus 335 ----g--~~~v~~V~~d~~g-~~d~~----~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id----pl~ei~~i~~~~~~ 399 (629)
+ ...+..+|.+.+. .++++ .|++.+.... .+...-.|+..-.....|.+- -+++|+++|++||+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~ 233 (425)
T PRK07495 155 KVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGI 233 (425)
T ss_pred ccCCCCCCCCeEEecCCcccccccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 1 1245667664321 23333 3344443211 112233343332222345443 38899999999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
++++ .+.+.......+ .....++ . .|.+++ -|.++.-+..|.++.+++ +... +.. ...
T Consensus 234 llI~DEv~tG~gr~G~~~------a~~~~gv-~-pDi~tl--sK~l~~G~pigav~~~~~-i~~~-~~~--~~~------ 293 (425)
T PRK07495 234 LLIADEVQTGFARTGKLF------AMEHHEV-A-ADLTTM--AKGLAGGFPLAAVTGRAE-IMDA-PGP--GGL------ 293 (425)
T ss_pred EEEEechhhcCCcCCCce------eecccCC-C-CCEEee--hhhhcCCccceEEEEcHH-HHhc-cCC--CCc------
Confidence 9988 554432111100 0111122 2 576666 688876566888888653 3321 110 000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCCceEEEEEee
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~~~~v~F~~~ 553 (629)
. .|. ++.+........+++.+..+++ .++..++.++|+++|++. |.+.-+. .. -..+.+.+.
T Consensus 294 ------~--~T~-~~~pl~~aaa~a~l~~l~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~i~~vr-G~-Gl~~~iel~ 359 (425)
T PRK07495 294 ------G--GTY-GGNPLGIAAAHAVLDVIEEEDL---CERANQLGNRLKQRLASLRETVPEIADIR-GP-GFMNAVEFN 359 (425)
T ss_pred ------C--CCC-CCCHHHHHHHHHHHHHHHhchH---HHHHHHHHHHHHHHHHHHHhhCCCeeeee-cC-ceEEEEEEe
Confidence 0 011 2333333333455666544444 445555667777666553 2221111 11 122333333
Q ss_pred CCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 554 PPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 554 p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
++.. ... . ......+.+.+.++|.++ ...... .+.+|+... ...|+++||.+++.|++..++
T Consensus 360 ~~~~-~~~-~-------~~~~~~~~~~~~~~Gvl~-~~~g~~--~~~~r~~Pp-l~it~~~id~~~~~l~~~l~~ 421 (425)
T PRK07495 360 DADS-GLP-S-------AEFANRVRLKALEKGLIL-LTCGVH--GNVIRFLAP-ITIQDDVFAEALDILEASILE 421 (425)
T ss_pred cCCC-CCc-c-------HHHHHHHHHHHHHCCeEE-eecCCC--CCEEEEeCC-CccCHHHHHHHHHHHHHHHHH
Confidence 2210 000 0 012346788889999654 222111 268999985 789999999999999887654
No 329
>PLN02368 alanine transaminase
Probab=98.60 E-value=3.4e-05 Score=84.08 Aligned_cols=261 Identities=11% Similarity=0.017 Sum_probs=154.2
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCCC--CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGFQ--GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~~--~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
.|....+...+-+.+.+++.+..|++ ..+.++|+|++++...++.+.... |...|++..-+....
T Consensus 102 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~-------------pGd~Vli~~P~Y~~y 168 (407)
T PLN02368 102 AYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRG-------------EKDGVLVPVPQYPLY 168 (407)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCC-------------CCCEEEEeCCCCccH
Confidence 34433444556666677777766754 468899999999876655543211 334466666666677
Q ss_pred HHHHHHcCCCCCCEEEEecCCC--CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCe
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDAR--GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMA 400 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~--g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~ 400 (629)
...++..|. +++.|+++++ +.+|++.|++++.....++..+.+++.+...+-+|.+-+ +.+|.++|+++++|
T Consensus 169 ~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~ 245 (407)
T PLN02368 169 SATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLV 245 (407)
T ss_pred HHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 788889998 9999998753 689999999999764444434666777778899998855 55667789999999
Q ss_pred EEE--ecCccccccc-cccccccccc-ccc--ccCCcce-EEEeCCCCCC-CCC-CccEEEEE--eccchhhhhhcCCCC
Q psy1785 401 DSV--TWNPHKLLTA-PQQCSVFLTR-RNY--VIEVVAD-SVTWNPHKLL-TAP-QQCSVFLT--RHQSVLTECHSASAS 469 (629)
Q Consensus 401 lhV--A~gg~~l~~~-~~~~~~~l~~-~~~--~i~~gaD-sv~~~~HK~l-~~P-~~~g~ll~--r~~~~l~~~~~~~~~ 469 (629)
+.. +|.-..+-.. +. .+. +.. ..+ +++.... .+..++.|.+ +.| +=+|.+.+ .++.++.......
T Consensus 246 II~DE~Y~~l~y~~~~~~-~s~-~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~-- 321 (407)
T PLN02368 246 LLGDEVYQQNIYQDERPF-ISA-KKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVA-- 321 (407)
T ss_pred EEEEccccccccCCCCCc-ccH-HHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHh--
Confidence 988 6655432110 00 000 000 000 0111012 4456789987 444 44787775 3444444322110
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcC-----hh---hH----HHHHHHHHHHHHHHHHHHhcCCCcE
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKG-----TD---GL----EAHIDKSFDNAKYFTDKIRHRPGFK 537 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G-----~~---G~----~~~~~~~~~la~~l~~~L~~~~g~~ 537 (629)
... + + ...+.-+++..++. .. .+ +++++...+.++.+.+.|++++|+.
T Consensus 322 ~~~--------------~---~---~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~ 381 (407)
T PLN02368 322 SIA--------------L---S---PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVV 381 (407)
T ss_pred ccc--------------C---C---CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeE
Confidence 000 0 1 11222233333331 11 12 3345666777888999999999987
Q ss_pred EEccCCCceEEEE
Q psy1785 538 LVLDEPECTNISF 550 (629)
Q Consensus 538 l~~~~p~~~~v~F 550 (629)
+. .|+-...+|
T Consensus 382 ~~--~P~Gafy~~ 392 (407)
T PLN02368 382 CN--FTEGAMYSF 392 (407)
T ss_pred eC--CCCeeeEec
Confidence 64 466654444
No 330
>KOG0259|consensus
Probab=98.59 E-value=5.1e-05 Score=78.59 Aligned_cols=345 Identities=13% Similarity=0.110 Sum_probs=183.1
Q ss_pred CCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhC--CCCCCeEEeCCchhhHHHHHHH
Q psy1785 216 GHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVG--FQGGDGIFCPGGSMANGYAISC 293 (629)
Q Consensus 216 ~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G--~~~~~g~~~~GgT~an~~al~~ 293 (629)
+.|..++.+.+.....-.+.+.+.+.. ...|..+.+....-+.+.+.+-+=+. +...+.++|+|-+.|+.+++.+
T Consensus 69 GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~ 145 (447)
T KOG0259|consen 69 GDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISS 145 (447)
T ss_pred CCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHH
Confidence 556666666655443333333332221 11233333333332333333222221 1236889999999988776654
Q ss_pred HHHhhchhHHhcCCCCCCCeEEEE--cCCcchHHHHHHHHcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCc
Q psy1785 294 ARHHAFPQIKTQGLASCPRLVLYT--SEDAHYSIKKLAAFEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVP 369 (629)
Q Consensus 294 ar~~~~~~~~~~G~~~~p~~vv~~--s~~~H~Si~kaa~~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~ 369 (629)
-- + |+--|+. .+..||. .-|...|+ +|+....- .+..+|++.+|+.+++ ++
T Consensus 146 LA-~-------------p~aNILlPrPGfp~Y~--~~a~~~~l---EVR~ydlLPe~~weIDL~~veal~DE------NT 200 (447)
T KOG0259|consen 146 LA-N-------------PGANILLPRPGFPLYD--TRAIYSGL---EVRYYDLLPEKDWEIDLDGVEALADE------NT 200 (447)
T ss_pred hc-C-------------CCCceecCCCCCchHH--HhhhhcCc---eeEeecccCcccceechHHHHHhhcc------Ce
Confidence 32 2 2222333 3444443 34678899 89888763 5679999999999887 57
Q ss_pred EEEEEeeCCCccccc---cCHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeC-CCCCC
Q psy1785 370 FMVSATSGTTVLGAF---DPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWN-PHKLL 443 (629)
Q Consensus 370 ~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~-~HK~l 443 (629)
+++++.-.++..|.+ +.|++|+++|+++++.+.- .|+-.++-..|+ +....+ -.. +=.++.+ ..|-.
T Consensus 201 ~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pf-----vpmg~f-ssi-VPVitlggisKrW 273 (447)
T KOG0259|consen 201 VAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPF-----VPMGKF-SSI-VPVITLGGISKRW 273 (447)
T ss_pred eEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCc-----cchhhc-ccc-CceEeeccccccc
Confidence 888888888888877 7899999999999987766 333322211110 001111 011 2223322 23444
Q ss_pred CCC-CccEEEEEeccc-hhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHH
Q psy1785 444 TAP-QQCSVFLTRHQS-VLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFD 521 (629)
Q Consensus 444 ~~P-~~~g~ll~r~~~-~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~ 521 (629)
.+| .-.|.+.+-++. .++.+- .+..- -++.+.+. ..--.--.++-..|..--.+-|.+...-...
T Consensus 274 ~VPGWRlGWi~~hD~~gvf~~~~-----~~q~~-------~~~~~~~~-~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~ 340 (447)
T KOG0259|consen 274 IVPGWRLGWIALHDPRGVFRDTK-----VVQGI-------KNFLDIIP-GPATIIQGALPDILEKTPEEFFDKKLSFLKS 340 (447)
T ss_pred ccCCceeeeEEEecccccccchH-----HHHHH-------HHHHhccC-CccHhHHHHhHHHHHhChHHHHHHHHHHHHh
Confidence 444 336777766542 221110 00000 00000000 0000000112222333345667777888888
Q ss_pred HHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCC---CCCCchhhHHHHHhhHHHHHHHHHHhc-CcEEEeeeecCCc
Q psy1785 522 NAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSL---RGKEDQADFNELLHKVAPKIKERMMKS-GSMMITYQPIHAL 597 (629)
Q Consensus 522 la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~---~~~~~~~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~~~~~~ 597 (629)
++....++|+++|++.... .|+...... . .... ...+++. .+.++|.++ ..+++.++.+ +.
T Consensus 341 na~l~y~~Lk~IP~l~cp~-kPeg~mylm-v-~l~~s~~~~~~dD~-----------dFc~kL~~Eesv~~LPG~af-~~ 405 (447)
T KOG0259|consen 341 NADLCYSRLKDIPCLTCPV-KPEGCMYLM-V-KLNLSLFPDIEDDV-----------DFCQKLAREESVICLPGQAF-GL 405 (447)
T ss_pred hHHHHHHHHhcCCCcccCc-CCCcceEEE-e-ccchhhhccccccH-----------HHHHHHhhhcceEEeccccc-cC
Confidence 9999999999999998655 576654322 1 1111 1112221 344555544 4444444443 45
Q ss_pred cceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 598 PNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 598 ~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
+||+|++++ +..+.|+..++.|+..+
T Consensus 406 ~nw~Ri~i~---~~~~~leea~~Rik~Fc 431 (447)
T KOG0259|consen 406 KNWLRIVIT---VEEEMLEEAFSRIKEFC 431 (447)
T ss_pred CCeEEEEEc---cChHHHHHHHHHHHHHH
Confidence 689999986 45677777777777664
No 331
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.59 E-value=4.3e-05 Score=83.87 Aligned_cols=309 Identities=10% Similarity=0.036 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC-----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG----- 333 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG----- 333 (629)
+.++.+.+++++..+-....|+.+||+|+..|++.||... .+.|.++. ..+|...+.-|-...-+..+.|
T Consensus 89 ~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~----~~~g~~~r-~~ii~~~~~yHG~t~~a~s~~~~~~~~ 163 (429)
T PRK06173 89 AVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQ----QAKGEVQR-TKFATIRSGYHGDTWHAMSVCDPVTGM 163 (429)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHH----HHhCCCCC-cEEEEECCCcCCcchhhhccCCCchhh
Confidence 3455566667664222468999999999999999999742 11232222 2345556666664332222211
Q ss_pred ---C--CCCCEEEEecCCCC------CCCHHHHHHHHHHHHhCCCCcEEEEEeeC-CCcccccc----CHHHHHHHHHHc
Q psy1785 334 ---L--GSDNVYLIKTDARG------RMLPESLRGEIQRTLAEGAVPFMVSATSG-TTVLGAFD----PIPAIADICAEY 397 (629)
Q Consensus 334 ---l--g~~~v~~V~~d~~g------~~d~~~Le~~i~~~~~~g~~~~~Vvat~G-tt~~G~id----pl~ei~~i~~~~ 397 (629)
+ ....+..+|..... .-+++.|++.|+. .+...-.|++--. ....|.+- =+++++++|++|
T Consensus 164 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~ 240 (429)
T PRK06173 164 HGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY 240 (429)
T ss_pred hhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence 0 11234445432110 1135556666642 2223333333321 22224332 278999999999
Q ss_pred CCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCC--Cccc
Q psy1785 398 DMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASA--SYLF 472 (629)
Q Consensus 398 ~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~--~yl~ 472 (629)
|+++.+ +.-|.--... .+-....++ . .|.++ .-|.++.- ..+|.++.+++ +.+. +.... .+..
T Consensus 241 g~llI~DEv~tG~GrtG~------~~a~~~~gv-~-PDiv~--~gK~l~gG~~p~~a~~~~~~-i~~~-~~~~~~~~~~~ 308 (429)
T PRK06173 241 GVLLIFDEIATGFGRTGK------LFALEHAGV-V-PDIMC--IGKALTGGYLTLSATITTEA-IAQT-ICSGEAKCFMH 308 (429)
T ss_pred CCeEEecchhcCCCcCCc------chHHHhcCC-C-CCEEE--eehhhhCCccccceEEecHH-HHHH-HhcCCCCcccc
Confidence 999988 5433211111 000111233 2 68887 47887655 35788887763 3322 11000 0110
Q ss_pred cCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccC--CCceEEEE
Q psy1785 473 QKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDE--PECTNISF 550 (629)
Q Consensus 473 ~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~--p~~~~v~F 550 (629)
. . |. .+.+..+.....+|+.+-.++ ..++..++.++|++.|++..++..+. + -...++.+
T Consensus 309 ~-----------~--T~-~g~p~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~v~-~vRg~Gl~~~i 370 (429)
T PRK06173 309 G-----------P--TF-MANPLACAIAAESIRLLLESP---WQQNIQRIEAQLKQELAPAAEFDSVA-EVRVLGAIGVV 370 (429)
T ss_pred C-----------C--CC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCee-eeeccceEEEE
Confidence 0 0 11 233445555566666664444 35667778889999887643333232 1 12233334
Q ss_pred EeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 551 WYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 551 ~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+..+. .+..+.+.|.++|.++ .. .+ +.+|+..- ...|++|||.+++.|++...+
T Consensus 371 el~~~~----------------~~~~i~~~l~e~Gi~v-~~---~g--~~l~~~Pp-l~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 371 EMKEPV----------------NMATLQPRFVEHGIWV-RP---FG--KLVYIMPP-FIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred EeCCcc----------------cHHHHHHHHHHCCeEE-Ee---cC--CEEEEeCC-ccCCHHHHHHHHHHHHHHHHH
Confidence 332110 0135778899999643 22 12 58999985 789999999999999887543
No 332
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=98.59 E-value=3e-05 Score=85.13 Aligned_cols=309 Identities=13% Similarity=0.106 Sum_probs=156.7
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCC---
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGS--- 336 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~--- 336 (629)
.++.+.+++.+.-. ....|+.+||+++..|++.||... | +..+|.....-|-....+....+-|.
T Consensus 91 ~~lae~l~~~~~~~-~~v~~~~sGseA~e~Alk~ar~~~-------g----r~~ii~~~~~yhG~~~~~~~~~~~~~~~~ 158 (423)
T TIGR00713 91 ILLAKEIISRVPSV-EMVRFVNSGTEATMSAVRLARGYT-------G----RDKIIKFEGCYHGHHDALLVKAGSGAATL 158 (423)
T ss_pred HHHHHHHHHhCCcc-cEEEEeCCHHHHHHHHHHHHHHhh-------C----CCEEEEEcCCCCCChhhhhccccCccccc
Confidence 44555566665432 468999999999999999998751 2 23355555556654333222111110
Q ss_pred -------------CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCC
Q psy1785 337 -------------DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDM 399 (629)
Q Consensus 337 -------------~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~ 399 (629)
..+..+|. .|+++|++.+.+. +.....|+..--....|.+-| +++|+++|++|++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~-----~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~ 230 (423)
T TIGR00713 159 GLPTSPGVPEDFAKLTLVLPY-----NDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGS 230 (423)
T ss_pred CCCCCCCCCcccccceEEeCC-----CCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 01223332 2788998888632 223344444322333677766 7899999999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
++++ ++.+. ...... ....+++ . .|.+ ..-|.++.-+..|.++.++ ++.... .....+. .
T Consensus 231 llI~DEv~~g~-r~g~~~------~~~~~~~-~-pDi~--t~sK~l~~G~pig~v~~~~-~i~~~~-~~~~~~~-~---- 292 (423)
T TIGR00713 231 LLIFDEVMTGF-RVALGG------AQEYFGV-E-PDLT--TLGKIIGGGLPVGAFGGRR-EIMERL-APEGPVY-Q---- 292 (423)
T ss_pred EEEEEcccccc-ccCcch------hHHHhCC-C-cchh--hhhhhhcCCCceeeeeEHH-HHHHhh-CcCCCee-e----
Confidence 9999 66554 211100 0011122 2 4654 4688887545578887765 333321 1000000 0
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHH-HHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAH-IDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPS 556 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~-~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~ 556 (629)
. +..++.+........+++.+..+++.+. .+....+.+.|.+.+++. ++..-. ...-..+.+.+..+.
T Consensus 293 ------~---~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v-~~~g~~~~v~~~~~~ 361 (423)
T TIGR00713 293 ------A---GTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTV-NRVGSMFSLFFTEEE 361 (423)
T ss_pred ------c---cCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE-EeeccEEEEEEecCC
Confidence 0 0012333334444455555544433222 222222334444444444 443211 122233344333221
Q ss_pred CCCCCchhhHHHHH-hhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 557 LRGKEDQADFNELL-HKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 557 ~~~~~~~~~~~~~l-~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
..... + .... ......+.+.|.++|.+ +... + .+.+|++. ..|++||+.+++.|+++.++|
T Consensus 362 ~~~~~---~-~~~~~~~~~~~~~~~l~~~Gv~-v~~~---~-~~~~~l~~---~~t~~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 362 VTNYA---D-AKKSDTELFAKFFHEMLDKGVF-LPPS---Q-FEACFLSA---AHTEEDIENTIEAAEEVFAEL 423 (423)
T ss_pred CCChh---h-hhcccHHHHHHHHHHHHHCCeE-EecC---C-ccceeeEC---CCCHHHHHHHHHHHHHHHhhC
Confidence 11000 0 0000 01123677888888854 3321 1 13577654 379999999999999887654
No 333
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.58 E-value=0.00015 Score=80.06 Aligned_cols=318 Identities=13% Similarity=0.048 Sum_probs=164.6
Q ss_pred HHHHHHHHHHHhCCC--CCCeEE-eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-
Q psy1785 259 EEHVLAQMRTIVGFQ--GGDGIF-CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~--~~~g~~-~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl- 334 (629)
..++.+.+++++... ....+| +++||+|+..|++.||.. .| . +.++...+.-|-...-+..+.+.
T Consensus 84 ~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~-------tg---r-~~Ii~~~~~yHG~t~~~~s~t~~~ 152 (442)
T TIGR00709 84 KDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTY-------TG---R-TNVISFSGGFHGMTIGALAVTGNL 152 (442)
T ss_pred HHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHh-------cC---C-CeEEEEcCCcCCchHHHHhhcCCh
Confidence 345556677776422 123345 589999999999999975 12 2 33666777778776555554431
Q ss_pred --------CCCCEEEEecCCCCCC--------CHHHHHHHHHHHHh---CC-CCcEEEEEeeCCCcccccc----CHHHH
Q psy1785 335 --------GSDNVYLIKTDARGRM--------LPESLRGEIQRTLA---EG-AVPFMVSATSGTTVLGAFD----PIPAI 390 (629)
Q Consensus 335 --------g~~~v~~V~~d~~g~~--------d~~~Le~~i~~~~~---~g-~~~~~Vvat~Gtt~~G~id----pl~ei 390 (629)
....+..+|.....+. +.+.+.+.+++..+ .+ .....|++.-.....|.+- =++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~l 232 (442)
T TIGR00709 153 FAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKI 232 (442)
T ss_pred hhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHH
Confidence 1123455554322222 22233332322221 11 2233333333333334432 37899
Q ss_pred HHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCC
Q psy1785 391 ADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASA 468 (629)
Q Consensus 391 ~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~ 468 (629)
+++|++||+++++ .+.|.......+ -..++++ . .|.+++ -|.++.-+..|.++.+++ . . .+. .
T Consensus 233 r~lc~~~g~llI~DEV~tGfGRtG~~~------a~~~~gv-~-PDiv~~--gK~l~~G~Pigav~~~~~-~-~-~~~--~ 297 (442)
T TIGR00709 233 REVTRKHDIKLILDEVQAGFGRSGTMF------AFEHAGI-E-PDFVVM--SKAVGGGLPLAVLLIAPE-F-D-AWQ--P 297 (442)
T ss_pred HHHHHHcCCEEEEeccccCCCCCCchh------HHHHcCC-C-CcEEEE--cccccCCcccEEEEEchH-H-h-ccC--C
Confidence 9999999999988 443322211100 1111233 2 688885 688776667888888764 2 2 111 0
Q ss_pred CccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCce
Q psy1785 469 SYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECT 546 (629)
Q Consensus 469 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~ 546 (629)
... .. | .++.+......-.+|+.+..+++ .++..++.++|.+.|+++. .+.++.+ .-.-.
T Consensus 298 ~~~------------~~--T-~~gnpla~aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 298 AGH------------TG--T-FRGNQLAMVTGTEALNYWKDDNL---AQNAQERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred CcC------------CC--C-CCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 000 00 1 13334444444555665555554 4455567777777776531 2222220 01112
Q ss_pred EEEEEeeCCC-CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 547 NISFWYIPPS-LRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 547 ~v~F~~~p~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.+.+.+..+. .+...+...... .+...+...+.++|.++ ...... .+.+|+.+. ...|++|||.+++.+++.
T Consensus 360 ~~~ie~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~Gvl~-~~~~~~--~~~l~~~Pp-l~it~~ei~~~~~~l~~~ 432 (442)
T TIGR00709 360 MQGIMIVDERQSKDATGAYPRDC---ELAAAIQGACFENGLLL-ETGGRE--GEVFRLLCP-ITIDQEECEEGISRFKQA 432 (442)
T ss_pred EEEEEEccCcccccccccCCcch---HHHHHHHHHHHHCCeEE-eecCCC--CCEEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 2334332211 000000000000 12346788888999653 322211 368999995 899999999999999876
Q ss_pred hh
Q psy1785 626 GH 627 (629)
Q Consensus 626 ~~ 627 (629)
..
T Consensus 433 l~ 434 (442)
T TIGR00709 433 VE 434 (442)
T ss_pred HH
Confidence 54
No 334
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=98.58 E-value=7.9e-05 Score=81.75 Aligned_cols=308 Identities=14% Similarity=0.169 Sum_probs=162.3
Q ss_pred HHHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 260 EHVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
.++.+.+++++... .....|+.+||+|+..|++.||... | .++ ++...+.-|-...-+..+.+.
T Consensus 86 ~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~t-------g---r~~-ii~~~~~yHG~t~~~~s~t~~~~~~ 154 (421)
T PRK06777 86 VTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYT-------G---RPG-VIAFGGAFHGRTLLTMALTGKVAPY 154 (421)
T ss_pred HHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhh-------C---CCe-EEEEcCCcCCccHHHHhhcCCCccc
Confidence 34445566665432 2468899999999999999998751 2 233 455566667654444433221
Q ss_pred ----C--CCCEEEEecCCC--C---CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccc-ccC---HHHHHHHHHHcCC
Q psy1785 335 ----G--SDNVYLIKTDAR--G---RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGA-FDP---IPAIADICAEYDM 399 (629)
Q Consensus 335 ----g--~~~v~~V~~d~~--g---~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~-idp---l~ei~~i~~~~~~ 399 (629)
+ ...+..++..+. + .-+++.|++.+++.. .+...-.|+..-.....|. +-| +++|+++|++||+
T Consensus 155 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~ 233 (421)
T PRK06777 155 KVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGI 233 (421)
T ss_pred ccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 0 123444443321 1 123555666664311 1122333333322333342 233 8999999999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
++++ .+.+........ ....+++ . .|.++ .-|.++.-+..|.++.++ ++.+. +... ..
T Consensus 234 llI~DEv~tg~gr~g~~~------~~~~~~~-~-pDiv~--~sK~l~~G~pigav~~~~-~i~~~-~~~~--~~------ 293 (421)
T PRK06777 234 LLIADEVQTGFARTGKLF------AMEYYDV-K-PDLIT--MAKSLGGGMPISAVVGRA-EVMDA-PAPG--GL------ 293 (421)
T ss_pred EEEEechhhCCccCCchh------hhhhcCC-C-CCEEe--eehhhcCCCceEEEEEcH-HHHhc-cCCC--CC------
Confidence 9988 555432211100 0011122 2 67665 578887556678888765 33322 1100 00
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCCceEEEEEee
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPECTNISFWYI 553 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~~~~v~F~~~ 553 (629)
.. | .++.+........+|+.+.. +++.++..++.++|++.|+++ +.+.-+ .+.-..+.+.+.
T Consensus 294 ------~~--T-~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v--rg~G~~~~i~~~ 359 (421)
T PRK06777 294 ------GG--T-YAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDI--RARGSMVAVEFN 359 (421)
T ss_pred ------CC--C-CCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe--cCceEEEEEEEe
Confidence 00 1 13333333334444444433 345667777888888888764 333222 233333443343
Q ss_pred CCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 554 PPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 554 p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.+. .+.. . ......+.+.+.++|.++.. .... .+++|+++. ...|+++||..++.|++..
T Consensus 360 ~~~-~~~~-~-------~~~~~~l~~~~~~~Gv~i~~-~~~~--g~~lr~~pp-l~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 360 DPQ-TGKP-S-------PEFTRQYQRQALEEGLLLLS-CGVH--GNVIRFLYP-LTIPDAQFSKALNILTRLL 419 (421)
T ss_pred cCc-cCCc-c-------HHHHHHHHHHHHhCCeEEee-cCCC--CCEEEEeCC-CCCCHHHHHHHHHHHHHHH
Confidence 211 0110 1 11234567778889965432 2111 258999984 5789999999999998764
No 335
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.57 E-value=3.2e-05 Score=84.89 Aligned_cols=309 Identities=9% Similarity=-0.010 Sum_probs=164.2
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.+..++++++++-+-....|+.+||+++..|+..||.... ..|.++ ..-++...+.-|-...-+..+.+-
T Consensus 91 ~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~----~~~~~~-r~~il~~~~~yHG~t~~~~s~~~~~~~~~ 165 (427)
T TIGR00508 91 IELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQ----AKGEKN-RQKFLTIRSGYHGDTFGAMSVCDPENSMH 165 (427)
T ss_pred HHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHH----hhCCCC-ccEEEEEcCCcCCccHhhhcccCCccccc
Confidence 4455667777643335789999999999999999997531 113211 234566677777654433333221
Q ss_pred -----CCCCEEEEecCCC-C-----CCCHHHHHHHHHHHHhCCCCcEEEEEee---C--CCccccccCHHHHHHHHHHcC
Q psy1785 335 -----GSDNVYLIKTDAR-G-----RMLPESLRGEIQRTLAEGAVPFMVSATS---G--TTVLGAFDPIPAIADICAEYD 398 (629)
Q Consensus 335 -----g~~~v~~V~~d~~-g-----~~d~~~Le~~i~~~~~~g~~~~~Vvat~---G--tt~~G~idpl~ei~~i~~~~~ 398 (629)
....+..++.... . .-|++++++.+++. +...-.|++-- | +...-..+++++++++|++|+
T Consensus 166 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~ 242 (427)
T TIGR00508 166 SLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYD 242 (427)
T ss_pred ccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence 0112233332111 0 11456666666532 22222333321 1 111224578999999999999
Q ss_pred CeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCC--CCcccc
Q psy1785 399 MADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSAS--ASYLFQ 473 (629)
Q Consensus 399 ~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~--~~yl~~ 473 (629)
+.+++ ++-|.......+ ....+++ . .|.+++ -|.++.-+ .++.++.+++ +.. .+... ..+...
T Consensus 243 ~llI~DEv~tG~Gr~G~~~------~~~~~~v-~-pDi~~~--gK~l~gG~~p~~a~~~~~~-~~~-~~~~~~~~~~~~~ 310 (427)
T TIGR00508 243 ILLIADEIATGFGRTGKLF------ACEHAGV-V-PDILCV--GKALTGGYMTLSATVTTDK-VAQ-TISSGEAGCFMHG 310 (427)
T ss_pred CEEEEeccccCCCcCCccc------hhhhcCC-C-CCEEEe--chhhhcCcccceEEEEcHH-HHH-HHhcCCCCccccC
Confidence 99988 543321111100 0111133 2 688875 78876543 4677777653 322 22111 011110
Q ss_pred CCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEe
Q psy1785 474 KDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWY 552 (629)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~ 552 (629)
. |. .+.+........+++.+..+. ..++..++.++|++.|+++.....+.+ .-...++.+.+
T Consensus 311 -----------~--T~-~g~p~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~ 373 (427)
T TIGR00508 311 -----------P--TF-MGNPLACAVAEASLAILLEGE---WQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEM 373 (427)
T ss_pred -----------C--CC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEE
Confidence 0 10 133444455555666554443 457777788999888877522111210 01122333433
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..+. . ...+.++|.++|.++ .. . + +.+|++.. ..+|++|||++++.+++..++
T Consensus 374 ~~~~------~----------~~~~~~~l~~~Gv~~-~~--~-~--~~l~~~pp-l~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 374 YKPV------N----------VEELQKKFVEQGVWI-RP--F-G--KLIYVMPP-YIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCcc------C----------HHHHHHHHHHCCeEE-Ee--c-C--CEEEEECC-CCCCHHHHHHHHHHHHHHHhc
Confidence 2110 0 135778899999643 32 1 2 47998884 779999999999999987653
No 336
>PTZ00376 aspartate aminotransferase; Provisional
Probab=98.56 E-value=4.3e-05 Score=83.32 Aligned_cols=283 Identities=8% Similarity=0.019 Sum_probs=159.8
Q ss_pred CCeE--EeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecC--CCCCC
Q psy1785 275 GDGI--FCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTD--ARGRM 350 (629)
Q Consensus 275 ~~g~--~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d--~~g~~ 350 (629)
.+.. .|.|++.+...++.+.+.- . .|...|++..-+......+++..|. +++.||.. +++.+
T Consensus 96 ~~v~~~~t~G~~~al~~~~~~l~~~-~----------~~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~ 161 (404)
T PTZ00376 96 KRIATVQALSGTGALRLGFEFLKRF-L----------PAGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGL 161 (404)
T ss_pred CeEEEeeccCcchHHHHHHHHHHHh-c----------CCCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCc
Confidence 4455 3888888866555432221 1 2445667777777788889999999 99999983 34789
Q ss_pred CHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccc
Q psy1785 351 LPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRN 425 (629)
Q Consensus 351 d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~ 425 (629)
|++.|++++.+. .....+++.....|-+|.+- .+.+|.++|++|++++.+ +|.....-........+.....
T Consensus 162 d~~~l~~~~~~~---~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 238 (404)
T PTZ00376 162 DFDGMLEDLRTA---PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAE 238 (404)
T ss_pred CHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHh
Confidence 999999988642 11235666677788888874 566777889999999988 7765432110000000000000
Q ss_pred cccCCcceEEEeCCCCCCCCC-CccEEEE--EeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHH
Q psy1785 426 YVIEVVADSVTWNPHKLLTAP-QQCSVFL--TRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWF 502 (629)
Q Consensus 426 ~~i~~gaDsv~~~~HK~l~~P-~~~g~ll--~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~ 502 (629)
. -+. =.++.++.|.++.| .=.|.++ +.+++........-..+... ...+. ..+..++
T Consensus 239 ~-~~~--vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~--------------~~~~~---~~~~q~~ 298 (404)
T PTZ00376 239 R-GVE--FLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRP--------------MYSSP---PIHGARI 298 (404)
T ss_pred c-CCc--EEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhh--------------hcCCC---chHHHHH
Confidence 0 011 15667889999855 5577774 45544322211000000000 00011 1223333
Q ss_pred HHHhcChhh--------HHHHHHHHHHHHHHHHHHHhcCC---CcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 503 MWKAKGTDG--------LEAHIDKSFDNAKYFTDKIRHRP---GFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 503 ~l~~~G~~G--------~~~~~~~~~~la~~l~~~L~~~~---g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
+..++.... +++..++..+..+.+.+.|++.. +++.+ .|..+.+ +|..- +
T Consensus 299 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~--~p~gg~f-~~~~~-~--------------- 359 (404)
T PTZ00376 299 ADRILSDPELRAEWLSELKEMSGRIQNMRQLLYDELKALGSPGDWEHI--INQIGMF-SFTGL-T--------------- 359 (404)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc--ccCceEE-EecCC-C---------------
Confidence 333332211 33344556677788888888762 23332 3444333 33211 0
Q ss_pred hHHHHHHHHHHhc-CcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 572 KVAPKIKERMMKS-GSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 572 ~~~~~i~~~l~~~-G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.++.++|.++ |. ++. .+ + |++++ ..+.++++.+++.|+.+..
T Consensus 360 ---~~~~~~L~~~~~v-~v~----p~--~--Ris~~--~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 360 ---KEQVERLIEKYHI-YLL----DN--G--RISVA--GLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred ---HHHHHHHHHhCCE-eec----CC--C--eEEEe--ccCHHhHHHHHHHHHHHHh
Confidence 2455667776 64 332 12 1 99996 3899999999999998754
No 337
>PRK07480 putative aminotransferase; Validated
Probab=98.55 E-value=0.0002 Score=79.23 Aligned_cols=322 Identities=14% Similarity=0.109 Sum_probs=159.2
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
..++.+.+++++.-+.....|+.+||+|+..|++.||... +..|.++. ..+|...+.-|-...-+..+-|.
T Consensus 96 ~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~----~~~g~~~r-~~ii~~~~~yHG~tl~a~s~~g~~~~~ 170 (456)
T PRK07480 96 AIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYW----ALKGKPQK-KVIISRKNGYHGSTVAGASLGGMKYMH 170 (456)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HhcCCCCC-cEEEEECCCcCCcchhhhhccCChhhh
Confidence 3445556667664322468899999999999999998742 11232111 23455555566544333222221
Q ss_pred -----CCCCEEEEecCCCC----CCC--------HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 335 -----GSDNVYLIKTDARG----RML--------PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 335 -----g~~~v~~V~~d~~g----~~d--------~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
....+..++..... ..+ ++.|++.+.. ..+...-.|++---....|.+-| +++++++
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~l 248 (456)
T PRK07480 171 EQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRI 248 (456)
T ss_pred cccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHH
Confidence 11233444422110 011 2444444432 11123333444333334567666 8999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
|++||+.+++ ...|.--....+ -...+|+. .|.+++ -|.++.-+ ..|.++++++ +.. .+......
T Consensus 249 c~~~g~llI~DEV~tGfGRtG~~~------a~~~~gv~--PDiv~~--gK~l~gG~~Pi~av~~~~~-i~~-~~~~~~~~ 316 (456)
T PRK07480 249 CRKYDILLVADEVICGFGRTGEWF------GSQHFGIK--PDLMTI--AKGLTSGYIPMGAVGVGDR-VAE-VLIEEGGE 316 (456)
T ss_pred HHHcCCEEEEechhhCCCcCcchh------hhhhcCCC--CCeeee--ehhhccCCccceEEEEcHH-HHH-HHhcCCCC
Confidence 9999999988 333321111100 01112342 688777 58776532 4677888663 332 22111110
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHH-HHHHHHHHHHHhcCCCcEEEcc-CCCceEE
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKS-FDNAKYFTDKIRHRPGFKLVLD-EPECTNI 548 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~-~~la~~l~~~L~~~~g~~l~~~-~p~~~~v 548 (629)
... .+ | ..+.+........+|+.+-.+++.+ +. .++.++|.+.|++.....++.+ .-.-..+
T Consensus 317 ~~~----------~~--T-~~gnpl~~Aaa~a~L~~l~~~~l~~---~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~ 380 (456)
T PRK07480 317 FNH----------GF--T-YSGHPVAAAVALANLRILRDEGIVE---RVRDDTGPYLQKRLRELADHPLVGEVRGVGLVG 380 (456)
T ss_pred ccc----------CC--C-CCcCHHHHHHHHHHHHHHHhCCHHH---HHHHHHHHHHHHHHHHhhcCCCeeeEEeecceE
Confidence 000 01 1 1233444455556666665555444 44 2456666666655322211210 0011122
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+.+..+..... + +.. .......+.+++.++|.++ .. .+ +.+|++.. ...|++|||.+++.|++...
T Consensus 381 gie~~~~~~~~~--~--~~~-~~~~~~~~~~~~~~~Gll~-~~---~~--~~l~~~Pp-l~it~~eid~~~~~l~~al~ 447 (456)
T PRK07480 381 AIELVKDKATRE--R--FEA-GGGVGTICRDHCFANGLIM-RA---VG--DRMIISPP-LVITHAEIDELVEKARKALD 447 (456)
T ss_pred EEEEeccccccc--c--Ccc-hhhHHHHHHHHHHHCCcEE-ee---cC--CEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 233322111000 0 000 0112245777889999654 21 12 47998874 66799999999999987654
No 338
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.54 E-value=4.6e-05 Score=80.98 Aligned_cols=268 Identities=8% Similarity=0.069 Sum_probs=162.9
Q ss_pred HHHHHHHHhC---CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 262 VLAQMRTIVG---FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 262 ~~~~l~~l~G---~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
..+.+++.++ ++..+.++|+|++++...++.+. .. |++..-++.....+++..|. +
T Consensus 61 Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~----------------d~--v~v~~P~y~~~~~~~~~~g~---~ 119 (335)
T PRK14808 61 LIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF----------------DR--SVFFPPTYSCYRIFAKAVGA---K 119 (335)
T ss_pred HHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh----------------Cc--EEECCCCHHHHHHHHHHcCC---e
Confidence 3444555555 66678899999999876655421 11 44455667778889999999 9
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
++.+|.++++.++... + + ...+|+.+...+-+|.+-+.+++.+++ ++++|+.+ +|.... .. .
T Consensus 120 ~~~v~~~~~~~~~~~~----~----~---~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~--~~--~ 183 (335)
T PRK14808 120 FLEVPLTKDLRIPEVN----V----G---EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFH--GE--S 183 (335)
T ss_pred EEEecCCCcCCCChhH----c----c---CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhc--CC--c
Confidence 9999998887766321 1 1 134677788999999999999999998 57898888 765431 11 0
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
+...+. . .+. =.++.++-|.++.| .-+|.++... ++..........+ + .+ ..
T Consensus 184 ~~~~~~--~--~~~--vi~~~S~SK~~~l~GlRvG~~v~~~-~~~~~l~~~~~~~-----------------~--~~-~~ 236 (335)
T PRK14808 184 YVDLLK--K--YEN--LAVIRTFSKAFSLAAQRIGYVVSSE-KFIDAYNRVRLPF-----------------N--VS-YV 236 (335)
T ss_pred hHHHHH--h--CCC--EEEEEechhhccCcccceEEEEeCH-HHHHHHHHhcCCC-----------------C--CC-HH
Confidence 000001 0 112 25667889999854 4477777644 4444321111000 0 01 11
Q ss_pred chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHH
Q psy1785 496 DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAP 575 (629)
Q Consensus 496 ~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~ 575 (629)
....+..++. ..+-+.+..+...+..+++.+.|++. |+++. +|..+.+.+++ |.. + ..
T Consensus 237 ~q~a~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~g~f~~~~l-~~~-~---------------~~ 294 (335)
T PRK14808 237 SQMFAKVALD--HREIFEERTKFIVEERERMKSALREM-GYRIT--DSRGNFVFIFM-EKE-E---------------KE 294 (335)
T ss_pred HHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC--CCCCeEEEEeC-CCc-c---------------HH
Confidence 1111222222 12334556666667778888999887 78754 35555443332 210 0 02
Q ss_pred HHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 576 KIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 576 ~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
++.++|.++|..+- . .. +++|++++ +.++++++++.|++.
T Consensus 295 ~~~~~l~~~Gi~V~-~--~~---~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 295 RLLEHLRAKNIAVR-S--FR---EGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred HHHHHHHHCCeEEE-E--CC---CCeEEecC----CHHHHHHHHHHHHhh
Confidence 56778888996543 2 22 47999997 578999999998753
No 339
>PRK06148 hypothetical protein; Provisional
Probab=98.54 E-value=6.8e-05 Score=90.61 Aligned_cols=317 Identities=14% Similarity=0.119 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC-----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG----- 333 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG----- 333 (629)
+.++.+++++++.-+.....|+.+||+||..|++.||... | .++ +|...+.-|-...-+..+.+
T Consensus 665 ~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~t-------G---r~~-ii~~~~~YHG~t~~a~s~s~~~~~~ 733 (1013)
T PRK06148 665 IVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHT-------G---QRD-AIVLDHAYHGTTTELIDLSPYKFNR 733 (1013)
T ss_pred HHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhc-------C---CCe-EEEEcCCccCCCcchhhcCchhhcc
Confidence 3455566766664222457899999999999999999751 2 223 44445555654332222111
Q ss_pred ---CC-CCCEEEEecCCC--CCC---C-------HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 334 ---LG-SDNVYLIKTDAR--GRM---L-------PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 334 ---lg-~~~v~~V~~d~~--g~~---d-------~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
.+ ...+..++.... +.. | .+.+++.|+.....+.....|++---....|.+-| +++++++
T Consensus 734 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~l 813 (1013)
T PRK06148 734 KGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAM 813 (1013)
T ss_pred cCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHH
Confidence 11 123433332211 111 1 24566666543333444555555444444566766 9999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCcc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYL 471 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl 471 (629)
|+++|+.+++ ..-|.--.... +.-....|+ . .|.+++ -|.++.-+..|+++++++ ... .+.....|
T Consensus 814 c~~~g~llI~DEVqtGfGRtG~~-----~~a~e~~gv-~-PDivt~--gK~lggG~Plgav~~~~e-i~~-~~~~g~~~- 881 (1013)
T PRK06148 814 VRAAGGVCIADEVQVGFGRVGSH-----WWAFETQGV-V-PDIVTM--GKPIGNGHPMGAVVTTRE-IAD-SFDNGMEY- 881 (1013)
T ss_pred HHHhCCEEEEEecccCCCCCCCc-----chhhhhcCC-C-cceeee--cccccCCcceEEEEEcHH-HHh-hccCCCcc-
Confidence 9999999988 32222111100 000111234 2 788888 688877677899998753 332 22110001
Q ss_pred ccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEEE
Q psy1785 472 FQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNIS 549 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v~ 549 (629)
.+ | -.+.+........+|+.+-.++ ..++..++.++|++.|+++. ...++.+ .-.-..+.
T Consensus 882 ------------~~--T-f~gnpla~aaa~a~L~~i~~e~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~g 943 (1013)
T PRK06148 882 ------------FN--T-FGGNPVSCAIGLAVLDIIEDED---LQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLG 943 (1013)
T ss_pred ------------cc--C-CCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEE
Confidence 00 1 1233444444555566665554 44556667788887776641 1111110 00111223
Q ss_pred EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 550 FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 550 F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+.+..+...... . .+....+.++|.++|.++ ..... ..+++|+.+. ..+|++|||++++.+++...+
T Consensus 944 vel~~~~~~~~~-~-------~~~~~~i~~~~~~~Gvl~-~~~g~--~~~vlr~~Pp-l~it~~~id~~l~~l~~~l~~ 1010 (1013)
T PRK06148 944 IELVTDRKTKAP-A-------TAIARYVKNGARERGILI-GTEGP--HDNVLKIRPP-LIFSRADADHLLEVLDDVLAA 1010 (1013)
T ss_pred EEecCCccccCc-c-------HHHHHHHHHHHHhCCeEE-eccCC--CCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHH
Confidence 333221100000 0 122356888999999654 32211 1368999985 889999999999999887654
No 340
>PRK07483 hypothetical protein; Provisional
Probab=98.54 E-value=0.00022 Score=78.71 Aligned_cols=327 Identities=14% Similarity=0.099 Sum_probs=162.0
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+++++++.-......|+++||+|+..|++.||.... ..|.++.+ -+|...+.-|-...-+..+.|-
T Consensus 76 ~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~----~~g~~~r~-~Ii~~~~~YHG~t~~a~s~s~~~~~~~ 150 (443)
T PRK07483 76 EALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFV----EIGQPQRR-HFIARRQSYHGNTLGALAIGGNAWRRE 150 (443)
T ss_pred HHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHH----hcCCCCCc-EEEEECCCcCCcCHHHhhhcCCccccc
Confidence 4455566666532224689999999999999999997521 12322222 2444456666654433333221
Q ss_pred ----CCCCEEEEecCCCCCC-----C--------HHHHHHHHHHHHhCCCCcEEEEEeeCC-CccccccC----HHHHHH
Q psy1785 335 ----GSDNVYLIKTDARGRM-----L--------PESLRGEIQRTLAEGAVPFMVSATSGT-TVLGAFDP----IPAIAD 392 (629)
Q Consensus 335 ----g~~~v~~V~~d~~g~~-----d--------~~~Le~~i~~~~~~g~~~~~Vvat~Gt-t~~G~idp----l~ei~~ 392 (629)
+...+..++.....+. + +++|++.+... .....-.|++---. +..|.+-| ++++++
T Consensus 151 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~ 228 (443)
T PRK07483 151 PFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPPVPGYFKRIRE 228 (443)
T ss_pred ccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHH
Confidence 1123444443211110 1 23455444321 11122223222111 12244544 899999
Q ss_pred HHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCC
Q psy1785 393 ICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 393 i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
+|++||+.+++ ..-|.-.... +.-..+++++ .|.+++ -|.++.-+ +.|+++++++ ... .+...+.
T Consensus 229 lc~~~gillI~DEV~tGfGRtG~------~~a~~~~gv~--PDiv~~--gK~l~gG~~Pi~av~~~~~-i~~-~~~~~~~ 296 (443)
T PRK07483 229 VCDRYGVLLILDEVMCGMGRTGT------LFACEEDGVA--PDLVTI--AKGLGAGYQPIGAVLASDR-IYD-AIADGSG 296 (443)
T ss_pred HHHHhCCEEEEecceeCcccCcH------HHHHhhcCCC--CCeeee--hhhhccCccccEEEEEcHH-HHH-HHhcCCC
Confidence 99999999988 3222211111 0011122342 688888 57777554 5788888774 332 2221111
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC-CCcEEEcc-CCCceE
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR-PGFKLVLD-EPECTN 547 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~-~g~~l~~~-~p~~~~ 547 (629)
.+... . | ..+.+........+|+.+-.++ .+++..++.++|++.|++. ....++.+ .-.-..
T Consensus 297 ~~~h~----------~--T-~~gnpl~~aaa~a~l~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm 360 (443)
T PRK07483 297 FFQHG----------H--T-YLGHATACAAALAVQRVIAEDG---LLANVRARGEQLRARLRERLGQHPHVGDIRGRGLF 360 (443)
T ss_pred ccccC----------C--C-CCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccE
Confidence 11110 0 0 1233333444445555554544 4555666778887777642 12222220 011122
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee-cCC-ccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQP-IHA-LPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~-~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
+.+.+..+......... . .++...+.+.+.++|.++..... ..+ ..+.||+... ...|++|||.+++.|++.
T Consensus 361 ~gie~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~Pp-L~it~~eid~~~~~l~~~ 434 (443)
T PRK07483 361 VGVELVADRATKAPFDP--A---LKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPP-FIITAAQIDEIVERLGDA 434 (443)
T ss_pred EEEEEeecccccCCCCc--h---hhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHH
Confidence 23333211100000000 0 11234678889999975432110 001 1368999985 788999999999999886
Q ss_pred hh
Q psy1785 626 GH 627 (629)
Q Consensus 626 ~~ 627 (629)
.+
T Consensus 435 l~ 436 (443)
T PRK07483 435 ID 436 (443)
T ss_pred HH
Confidence 54
No 341
>PRK07481 hypothetical protein; Provisional
Probab=98.53 E-value=0.0004 Score=76.77 Aligned_cols=328 Identities=13% Similarity=0.089 Sum_probs=165.5
Q ss_pred HHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC---
Q psy1785 259 EEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL--- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl--- 334 (629)
+.++.++++++++-+. ....|+++||+|+..|++.||... +..|.++ ...+|...+.-|-...-+..+.+-
T Consensus 88 ~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~----~~~g~~~-r~~ii~~~~~yHG~t~ga~s~~~~~~~ 162 (449)
T PRK07481 88 AIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYW----KVRGQPE-RTKFISLKQGYHGTHFGGASVNGNTVF 162 (449)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHH----HhcCCCC-CcEEEEECCCcCCcchhhhccCCCccc
Confidence 3455666777764222 367899999999999999998742 1223211 233555666667644333332211
Q ss_pred ------CCCCEEEEecCCCC-----CCCHHHHHHHHHH----HHh-C-CCCcEEEEEeeCCCccccccC----HHHHHHH
Q psy1785 335 ------GSDNVYLIKTDARG-----RMLPESLRGEIQR----TLA-E-GAVPFMVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 335 ------g~~~v~~V~~d~~g-----~~d~~~Le~~i~~----~~~-~-g~~~~~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
....+..++..... .-|++.+++.+.+ ... + +.....|+.---....|.+-| +++++++
T Consensus 163 ~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 163 RRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred ccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 01134444432211 1245555443322 111 1 233444444433444465555 8999999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCc
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
|++||+.+++ ...|.-.....+ -....++. .|.+++ -|.++.-+ ..|+++++++ ... .+.....
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~~~------a~~~~gv~--PDiv~~--gKgl~gG~~Pi~av~~~~~-i~~-~~~~~~~- 309 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGSWF------GSRGWGVK--PDIMCL--AKGITSGYVPLGATMVNAR-IAD-AFEANAD- 309 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCchhh------HhhhcCCC--CCEEEE--eecccCCCcCceEEEEcHH-HHH-HHhccCc-
Confidence 9999999988 322221111100 01112332 688888 58776542 4788888763 332 2211100
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEE
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNI 548 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v 548 (629)
... .....+ -.++.+........+|+.+..++ .+++..++.++|.+.|+++. .+.++.+ .-.-..+
T Consensus 310 ---~~~---~~~h~~---T~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~ 377 (449)
T PRK07481 310 ---FGG---AIMHGY---TYSGHPVACAAALATLDIVVRED---LPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLML 377 (449)
T ss_pred ---ccc---ccccCC---CCCCCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEE
Confidence 000 000001 11233444445555666655544 45566667788877777642 1222220 0111222
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.+..+..... ..+.. ......+.+++.++|.++ .. .+ +.+|++.. ...|++|||.+++.+++..++
T Consensus 378 gi~l~~~~~~~~--~~~~~---~~~~~~~~~~~~~~Gvl~-~~---~g--~~i~l~Pp-l~it~~eid~~~~~l~~~l~~ 445 (449)
T PRK07481 378 ALDLVADKATRE--PIDPS---KGYANAVADVARENGVLV-RP---SG--TKIILSPP-LVIQREDVDRIVDALDAGLSA 445 (449)
T ss_pred EEEecccccccC--CCCch---hHHHHHHHHHHHhCCeEE-Ee---cC--CEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence 333322110000 00000 112346778889999653 21 12 35888773 567999999999999887654
No 342
>PLN02263 serine decarboxylase
Probab=98.53 E-value=3.1e-07 Score=100.27 Aligned_cols=226 Identities=10% Similarity=0.050 Sum_probs=132.9
Q ss_pred hhHHHHHHHHHhhcccccCCccccccccccccc-CCCCHHHHHHhhc-c----CCC----CCCCCHHHHHHHHHHHhccc
Q psy1785 143 HGKLIDLMKTVIQYSVKTGHPYFVNQLFSSKVN-EWVNPEELEKKLE-L----GFN----AGPSSHAKLIDLMKTVIQYS 212 (629)
Q Consensus 143 ~~~ll~~~~~~l~y~v~t~hP~F~~~l~s~~v~-~~~~~~~l~~~~~-~----~lp----~~~~~~~~il~~l~~~~~~~ 212 (629)
.+++++.+.+.+.- ...+||++ +.+... .....+++...++ . ..+ ...+.|.++++|+.++++.+
T Consensus 75 ~~~~l~~~~~~~~~----~~~~~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p 149 (470)
T PLN02263 75 MASVLARYRKTLVE----RTKHHLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIE 149 (470)
T ss_pred HHHHHHHHHHHHHh----cccceeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCC
Confidence 46777777655422 22238998 555444 3445556555543 1 111 12246789999999998653
Q ss_pred ccCCCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHH
Q psy1785 213 VKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAIS 292 (629)
Q Consensus 213 ~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~ 292 (629)
. ..+.|++.++.+..++.|-+.++-..+.+..+-. .--+..+.+.++++|++ ....+ +..+..+..
T Consensus 150 ~----~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S-----~~aH~Sv~KAa~llgi~---~~~Vp--~d~~g~mD~ 215 (470)
T PLN02263 150 K----NEYWGYITNCGTEGNLHGILVGREVFPDGILYAS-----RESHYSVFKAARMYRME---CVKVD--TLVSGEIDC 215 (470)
T ss_pred C----CCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEc-----CCccHHHHHHHHhcCCc---ceEec--cCCCCcCcH
Confidence 1 2467999999999999986666543222211111 11144577899999995 23333 233334444
Q ss_pred HHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCC-----
Q psy1785 293 CARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGA----- 367 (629)
Q Consensus 293 ~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~----- 367 (629)
.++++++.+ .+ ..|.+||.+.+++ ..|.+| +|+ .|.+.+++..
T Consensus 216 ~aL~~aI~~---d~--~~P~iVvataGTT------------------------~~GAiD--pi~-eIa~i~~~~g~~~~~ 263 (470)
T PLN02263 216 ADFKAKLLA---NK--DKPAIINVNIGTT------------------------VKGAVD--DLD-LVIKTLEECGFSQDR 263 (470)
T ss_pred HHHHHHHHh---CC--CCcEEEEEEecCC------------------------CCcCCC--CHH-HHHHHHHHcCCccCC
Confidence 444443321 22 2477888888887 556666 333 3333333333
Q ss_pred CcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCccccccccccccccccc
Q psy1785 368 VPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 368 ~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~~ 423 (629)
.|+||++++|+...-..+..+ .....+...++++++|+|+..|++|++++..
T Consensus 264 iwlHVDAA~GG~~lPf~~~~~----~~df~~~vDSIsvD~HK~l~~P~~cgvll~R 315 (470)
T PLN02263 264 FYIHCDGALFGLMMPFVKRAP----KVTFKKPIGSVSVSGHKFVGCPMPCGVQITR 315 (470)
T ss_pred eeEEEeccchhhHhhhccccc----ccCCCcCccEEEECCccccCCCcCEEEEEEe
Confidence 599999999987652222211 1111123677799999999999999998644
No 343
>PRK08354 putative aminotransferase; Provisional
Probab=98.53 E-value=6.5e-05 Score=78.92 Aligned_cols=146 Identities=11% Similarity=-0.028 Sum_probs=97.5
Q ss_pred HHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEE
Q psy1785 262 VLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYL 341 (629)
Q Consensus 262 ~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~ 341 (629)
..+++++..|. +.++|+|++++...++. +.. |...|++..-+++.+.++++..|. +++.
T Consensus 45 l~~~ia~~~~~---~I~vt~G~~~al~~~~~-~~~--------------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~ 103 (311)
T PRK08354 45 LEEEFSKLFGE---PIVITAGITEALYLIGI-LAL--------------RDRKVIIPRHTYGEYERVARFFAA---RIIK 103 (311)
T ss_pred HHHHHHHHHCC---CEEECCCHHHHHHHHHH-hhC--------------CCCeEEEeCCCcHHHHHHHHHcCC---EEee
Confidence 45677787773 68899999998654432 111 233566777888889999999998 7765
Q ss_pred EecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH---HHHHHHHHHcCCeEEE--ecCcccccccccc
Q psy1785 342 IKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI---PAIADICAEYDMADSV--TWNPHKLLTAPQQ 416 (629)
Q Consensus 342 V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl---~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~ 416 (629)
++ +|++.|++.+.+ +..++.+...+.+|.+-+. .+|.++|+++++|+++ +|.....-..
T Consensus 104 ~~------~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~--- 167 (311)
T PRK08354 104 GP------NDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE--- 167 (311)
T ss_pred cC------CCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc---
Confidence 53 678888776642 2246667788999998764 5566678899999999 7766433111
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEE
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLT 454 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~ 454 (629)
. ....--.++.++-|.++.| .-+|.++.
T Consensus 168 --------~--~~~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 168 --------S--PEGENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred --------c--cCCCcEEEEeccHhhcCCccceeeeeee
Confidence 0 0111235667889999865 44676665
No 344
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=98.53 E-value=0.0003 Score=77.14 Aligned_cols=311 Identities=15% Similarity=0.176 Sum_probs=164.7
Q ss_pred HHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 260 EHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
.++.+.+++++.... ....|+++||+|+..|++.||.. .| .++ ++...+.-|-...-+..+.|.
T Consensus 86 ~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~-------tg---r~~-ii~~~~~yHG~t~~~~s~~~~~~~~ 154 (421)
T PRK09792 86 VTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAH-------TG---RPG-VIAFSGGFHGRTYMTMALTGKVAPY 154 (421)
T ss_pred HHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHh-------cC---CCe-EEEECCCcCCccHHHHhhcCCCccc
Confidence 445555666654322 46789999999999999999964 22 233 455566667654333333221
Q ss_pred ----C--CCCEEEEecCCCC-CCC----HHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc-C---HHHHHHHHHHcCC
Q psy1785 335 ----G--SDNVYLIKTDARG-RML----PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD-P---IPAIADICAEYDM 399 (629)
Q Consensus 335 ----g--~~~v~~V~~d~~g-~~d----~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id-p---l~ei~~i~~~~~~ 399 (629)
+ ...+..+|...+. .++ ++.|++.+++.. .......|+..-.....|..- | +++|+++|++||+
T Consensus 155 ~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~ 233 (421)
T PRK09792 155 KIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGI 233 (421)
T ss_pred ccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 1 1235555553221 122 355555554311 112334444444444455443 5 8999999999999
Q ss_pred eEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcC
Q psy1785 400 ADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKF 477 (629)
Q Consensus 400 ~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~ 477 (629)
++++ .+.+......+. ....+++ . .|.+++ -|.++.-+..|.++.+++ +... +.. ...
T Consensus 234 llI~DEv~tg~gr~G~~~------a~~~~~~-~-pDi~t~--gK~l~~G~pigav~~~~~-i~~~-~~~--~~~------ 293 (421)
T PRK09792 234 VMIADEVQSGFARTGKLF------AMDHYAD-K-PDLMTM--AKSLAGGMPLSGVVGNAN-IMDA-PAP--GGL------ 293 (421)
T ss_pred EEEEeccccCCCCCCchh------HHHhcCC-C-CcEEEe--ehhhcCCCceEEEEEcHH-HHhc-cCC--CCc------
Confidence 9998 555432221110 1111122 3 676555 788876567888887653 3321 110 000
Q ss_pred CCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCCC--ceEEEEEeeC
Q psy1785 478 YDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEPE--CTNISFWYIP 554 (629)
Q Consensus 478 ~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p~--~~~v~F~~~p 554 (629)
.. |. .+.+.........++.+..+ +++++..++.+++.+.|+++. .+..+. .+. -..+.+.+..
T Consensus 294 ------~~--T~-~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~-~vrG~Gl~~~ie~~~ 360 (421)
T PRK09792 294 ------GG--TY-AGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIA-AVRGLGSMIAAEFND 360 (421)
T ss_pred ------CC--CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCcc-eecccceEEEEEecC
Confidence 00 11 22232333333555555443 455566677777777776531 111122 222 1223333322
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
+.. ... + ......+.+.+.++|.++. . .....++||+.+. ...+++||+.+++.|+++..+
T Consensus 361 ~~~-~~~---~-----~~~~~~l~~~~~~~Gv~i~-~--~g~~~~~irl~P~-l~i~~~ei~~~~~~l~~~l~~ 421 (421)
T PRK09792 361 PQT-GEP---S-----AAIAQKIQQRALAQGLLLL-T--CGAYGNVIRFLYP-LTIPDAQFDAAMKILQDALSD 421 (421)
T ss_pred Ccc-CCc---c-----hHHHHHHHHHHHHCCcEEe-e--cCCCCCEEEEeCC-CcCCHHHHHHHHHHHHHHHhC
Confidence 110 000 0 0123567888999997542 1 1112368999984 669999999999999887653
No 345
>PRK07482 hypothetical protein; Provisional
Probab=98.51 E-value=0.00027 Score=78.34 Aligned_cols=327 Identities=14% Similarity=0.056 Sum_probs=163.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHc----
Q psy1785 257 LMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFE---- 332 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~l---- 332 (629)
....++.+.+++++.-+-....|+.+||+|+..|++.||... ...|.+.+ +.+|...+.-|-...-+..+.
T Consensus 94 ~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~----~~~g~~~r-~~Ii~~~~~YHG~t~ga~s~~~~~~ 168 (461)
T PRK07482 94 EASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYN----NVLGRPEK-KKIISRWRGYHGSGVVTGSLTGLSL 168 (461)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHH----HhcCCCCC-ceEEEecCccCCccHhhhhccCCch
Confidence 334555666777663222467899999999999999998642 11233222 234555566665432222221
Q ss_pred -----CCCCCCEEEEecCCCCC-------------CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHH
Q psy1785 333 -----GLGSDNVYLIKTDARGR-------------MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAI 390 (629)
Q Consensus 333 -----Glg~~~v~~V~~d~~g~-------------~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei 390 (629)
+.....+..++.....+ -+++.|++.++.. .......|++.-.....|.+-| ++++
T Consensus 169 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~~yl~~l 246 (461)
T PRK07482 169 FHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPAGYWPAI 246 (461)
T ss_pred hhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCHHHHHHH
Confidence 11122344444322111 1345666666421 1123334444322223344432 7899
Q ss_pred HHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCC
Q psy1785 391 ADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSAS 467 (629)
Q Consensus 391 ~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~ 467 (629)
+++|++||+.+++ ...|.......+ -....|+ . .|.+++ -|.++.-+ +.|.++++++ +.. .+...
T Consensus 247 r~lc~~~giLlI~DEV~tGfGRtG~~~------a~~~~gv-~-PDiv~~--gKgl~gG~~Pi~av~~~~~-i~~-~~~~~ 314 (461)
T PRK07482 247 QAVLKKYDILLIADEVVTGFGRLGSMF------GSDHYGI-E-PDLITV--AKGLTSAYAPLSGSIVGEK-VWD-VLEQG 314 (461)
T ss_pred HHHHHHhCCEEEEeccccCCCcCcchh------hHHhcCC-C-CCEEEE--ccccccCccccceeeecHH-HHH-HHhcc
Confidence 9999999999988 333321111100 0111234 2 799887 58886543 5677887764 322 22111
Q ss_pred CCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc----CCCcEEEccCC
Q psy1785 468 ASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH----RPGFKLVLDEP 543 (629)
Q Consensus 468 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~----~~g~~l~~~~p 543 (629)
... .. .....+ | ..+.+........+|+.+-.+++ .++..++.++|.+.|++ .+-+.-+. -
T Consensus 315 ~~~--~~-----~~~h~~--T-~~gnpl~~Aaa~a~L~~~~~~~l---~~~~~~~g~~l~~~L~~l~~~~~~v~~vr--G 379 (461)
T PRK07482 315 SDE--HG-----AIGHGW--T-YSGHPICAAAALANLDILERENL---VGNAAEVGAYFRARLRAAFGDHPLVGEVR--G 379 (461)
T ss_pred ccc--CC-----ccccCC--C-CCcCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHhcCCCEEEEe--e
Confidence 000 00 000000 1 12334344455556666655554 34455677777777754 32211111 1
Q ss_pred CceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 544 ECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 544 ~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.-..+.+.+..+..... ..+.. ..+...+...+.++|.++ ...+ + .+.+|+... ..+|++|||.+++.++
T Consensus 380 ~Glm~giel~~~~~~~~--~~~~~---~~~~~~i~~~~~~~Gvl~-~~~~--~-~~~i~~~Pp-l~it~~ei~~~~~~l~ 449 (461)
T PRK07482 380 VGMLAAVEFVADRDDRT--PFDPA---LKIGPQVSAAALERGVIA-RAMP--H-GDILGFAPP-LVLTRAEADEIVAIAK 449 (461)
T ss_pred ceeEEEEEeccCCCcCC--CCChh---hHHHHHHHHHHHHCCcEE-ecCC--C-CCEEEEeCC-CCCCHHHHHHHHHHHH
Confidence 11222233321110000 00000 112356788899999653 2111 1 257999985 8899999999999988
Q ss_pred HHhh
Q psy1785 624 RLGH 627 (629)
Q Consensus 624 ~l~~ 627 (629)
+..+
T Consensus 450 ~~l~ 453 (461)
T PRK07482 450 DAVD 453 (461)
T ss_pred HHHH
Confidence 7654
No 346
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.51 E-value=0.00014 Score=79.92 Aligned_cols=310 Identities=14% Similarity=0.089 Sum_probs=160.9
Q ss_pred HHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 260 EHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
.++.++++++.+.+. ...+|+.+|++++..|+..||... | +..+|..+..-|-+..-+..+-+-
T Consensus 87 ~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~-------~----r~~iv~~~~~yHG~~~~~~~~~~~~~~~ 155 (425)
T PRK08088 87 LELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT-------K----RSGVIAFTGAYHGRTHYTLALTGKVNPY 155 (425)
T ss_pred HHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHh-------C----CCeEEEECCccCCccHHHHHhhCCCCcc
Confidence 456666777766443 467899999999999999988641 1 233555687888775544443221
Q ss_pred ----C--CCCEEEE--ecCCCCCCC----HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcC
Q psy1785 335 ----G--SDNVYLI--KTDARGRML----PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYD 398 (629)
Q Consensus 335 ----g--~~~v~~V--~~d~~g~~d----~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~ 398 (629)
+ ...+..+ |.+.++ ++ ++.|++.+.+.. .+.....|+..-.....|.+-| +.+|.++|++|+
T Consensus 156 ~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~ 233 (425)
T PRK08088 156 SAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHG 233 (425)
T ss_pred ccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 0 1122222 222222 23 445666664321 1223334444433334455544 899999999999
Q ss_pred CeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc
Q psy1785 399 MADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK 476 (629)
Q Consensus 399 ~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~ 476 (629)
+++++ .+.+........ .....++ . .|.. +.-|.++.-+..|.++... ++.... ... .+.
T Consensus 234 ~~lI~Dev~~g~g~~g~~~------~~~~~~~-~-pdi~--s~sK~l~~G~rig~v~~~~-~~~~~~-~~~-~~~----- 295 (425)
T PRK08088 234 IMLIADEVQTGAGRTGTLF------AMEQMGV-A-ADLT--TFAKSIAGGFPLAGVTGRA-EVMDAI-APG-GLG----- 295 (425)
T ss_pred CEEEEeccccCCCcCcchh------HHhhcCC-C-CCEE--EEeccccCCCcceeeEecH-HHHhhc-CCC-CCC-----
Confidence 99988 666522111100 0001111 1 4544 4478887556678888754 333321 100 000
Q ss_pred CCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc----CCCcEEEccCCCceEEEEEe
Q psy1785 477 FYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH----RPGFKLVLDEPECTNISFWY 552 (629)
Q Consensus 477 ~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~----~~g~~l~~~~p~~~~v~F~~ 552 (629)
. +. ++.......+...++.... ++++++..++.+++++.|.+ .|.+.-+. .+ -..+.+.+
T Consensus 296 --------~--t~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~-g~-G~~~~l~l 359 (425)
T PRK08088 296 --------G--TY-AGNPIACAAALAVLKVFEQ---ENLLQKANALGEKLKDGLLAIAEKHPEIGDVR-GL-GAMIAIEL 359 (425)
T ss_pred --------C--CC-CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-cc-ceEEEEEE
Confidence 0 00 1222222222333333322 34455555556666555544 33332222 12 22233333
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..+...... + ......+.+.+.++|.++... ....++||+++. ...+++||+..++.|+++.+.
T Consensus 360 ~~~~~~~~p---~-----~~~~~~l~~~~~~~Gv~~~~~---~~~~~~iRl~~~-~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 360 FEDGDHSKP---N-----AKLTAQIVARARDKGLILLSC---GPYYNVLRILVP-LTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred ecCCCCCCC---C-----HHHHHHHHHHHHhCCCEEecC---CCCCCEEEEECC-CCcCHHHHHHHHHHHHHHHHh
Confidence 211100000 0 012346788899999654321 112368999995 788999999999999887654
No 347
>KOG0256|consensus
Probab=98.50 E-value=6.1e-05 Score=78.70 Aligned_cols=314 Identities=12% Similarity=0.159 Sum_probs=178.0
Q ss_pred HHHHHHHHHHhC----CCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH-cCC
Q psy1785 260 EHVLAQMRTIVG----FQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF-EGL 334 (629)
Q Consensus 260 ~~~~~~l~~l~G----~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~-lGl 334 (629)
+++.+.|.+.-| +++...+++.|+|.+|.+.+..-.. |....++..--...+..-+++ -|+
T Consensus 128 qa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLad--------------pgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 128 QAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLAD--------------PGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcC--------------CCceeeecCCCCCcccccceeccCc
Confidence 333444444444 3446789999999988655443222 222222222222233343333 355
Q ss_pred CCCCEEEEecCC--CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCc
Q psy1785 335 GSDNVYLIKTDA--RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNP 407 (629)
Q Consensus 335 g~~~v~~V~~d~--~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg 407 (629)
+++.|.++. ..++++++||+++.++.+.|.+..-|+.+-.++..|.+-+ |..+.+.+.++++.+++ -|.+
T Consensus 194 ---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~ 270 (471)
T KOG0256|consen 194 ---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAG 270 (471)
T ss_pred ---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcc
Confidence 777777763 3589999999999999999988889999999999998865 55556667889998888 6666
Q ss_pred ccccccccccccccccccc-ccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCC
Q psy1785 408 HKLLTAPQQCSVFLTRRNY-VIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSG 485 (629)
Q Consensus 408 ~~l~~~~~~~~~~l~~~~~-~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 485 (629)
.++-.. ++-.+++..+. .+...-=-++++..|=+|.| +=.|++|.-++.....+.....-++
T Consensus 271 sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~-------------- 334 (471)
T KOG0256|consen 271 SVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGL-------------- 334 (471)
T ss_pred cccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccC--------------
Confidence 654222 22222232221 11111223788999999988 3478888888765554322111011
Q ss_pred CccCCCCCCc-chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchh
Q psy1785 486 DKHIQCGRKP-DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQA 564 (629)
Q Consensus 486 ~~~~~~sr~~-~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~ 564 (629)
+|-.. .-+.-.+.=..+-.+-+++.-+|..+.-+|+.+.|++. |+..+. ...+.+|+---..-++..
T Consensus 335 -----vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~--s~AGlF~wvDlr~lL~s~---- 402 (471)
T KOG0256|consen 335 -----VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLK--SNAGLFCWVDLRKLLTSL---- 402 (471)
T ss_pred -----CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCceee--cCCeeEEEEEhHHhcCcC----
Confidence 11000 01111111111223344555566666778899999987 888764 566777764211112211
Q ss_pred hHHHHHhhHHHHHHHHHHhcCcEEEeeeec--CCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 565 DFNELLHKVAPKIKERMMKSGSMMITYQPI--HALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 565 ~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~--~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.+...+ ++.+++...=.+.+++..- ...++|||+|+. ...++.++-.++.|+.+
T Consensus 403 tfe~El-----~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA--n~~~~t~~~am~Ri~~~ 458 (471)
T KOG0256|consen 403 TFEGEL-----ELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA--NMSEETLEVAMRRLKQF 458 (471)
T ss_pred ChHHHH-----HHHHHHHHhhccccCCCCcceecCCCeEEEEec--cCCHHHHHHHHHHHHHH
Confidence 122222 4566666662234443221 134679999995 55666666555555544
No 348
>PRK06917 hypothetical protein; Provisional
Probab=98.49 E-value=0.00036 Score=77.12 Aligned_cols=329 Identities=14% Similarity=0.098 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC--
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG-- 335 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg-- 335 (629)
...++.+.+++++........|+++||+|+..|++.||... ...|.++. ..++...+.-|-...-+....+..
T Consensus 75 ~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~----~~rg~t~r-~~ii~~~~~yHG~t~~als~~~~~~~ 149 (447)
T PRK06917 75 PAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHF----QERGIQGK-HKILSRWMSYHGITMGALSMSGHPLR 149 (447)
T ss_pred HHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHH----HhcCCCCC-CEEEEECCCcCCccHHHHHhcCCccc
Confidence 34556666777764332467899999999999999998753 11233222 334555666676544444433321
Q ss_pred -------CCCEEEEecCCCCC------------CCHHHHHHHHHHHHhCC-CCcEEEEEeeCCC-ccccccC----HHHH
Q psy1785 336 -------SDNVYLIKTDARGR------------MLPESLRGEIQRTLAEG-AVPFMVSATSGTT-VLGAFDP----IPAI 390 (629)
Q Consensus 336 -------~~~v~~V~~d~~g~------------~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt-~~G~idp----l~ei 390 (629)
...+..+|.....+ -+++.|++.++. .+ ...-.|++.--.. .-|.+-| ++++
T Consensus 150 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~---~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~l 226 (447)
T PRK06917 150 RQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIER---IGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVI 226 (447)
T ss_pred cccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---cCCCceEEEEEeccccCcCceecCCHHHHHHH
Confidence 01233333211111 023455555542 22 1233333332111 2233333 7899
Q ss_pred HHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCC
Q psy1785 391 ADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSAS 467 (629)
Q Consensus 391 ~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~ 467 (629)
+++|++||+.+++ ...|.--... ..-...++++ .|.+++ -|.++.-+ ..|+++.+++ +... +...
T Consensus 227 r~lc~~~g~llI~DEv~tGfGRtG~------~~a~~~~gv~--PDi~~~--gK~l~~G~~Pi~a~~~~~~-i~~~-~~~~ 294 (447)
T PRK06917 227 KEICDHYDILFIADEVMTGLGRTGA------MFAMEHWGVE--PDIMTL--GKGLGAGYTPIAATVVSDR-VMEP-ILRG 294 (447)
T ss_pred HHHHHHcCCEEEEechhhCcCcccc------hhhHHhcCCC--CCEEEe--eehhccCCcceEEEEEcHH-HHHH-Hhcc
Confidence 9999999999988 3333211111 0001112332 688777 68887643 5778888763 3332 2111
Q ss_pred CCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCc
Q psy1785 468 ASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPEC 545 (629)
Q Consensus 468 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~ 545 (629)
...+... ++ ..+.+........+++.+..++ .+++..++.++|++.|+++. ...++.+ .-.-
T Consensus 295 ~~~~~~~----------~T---~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G 358 (447)
T PRK06917 295 SRSIMSG----------HT---LSANPLSAATALAVLEYMEKHN---LPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKG 358 (447)
T ss_pred Ccccccc----------cC---CCCCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Confidence 1111110 00 1233434444555566554444 45566667777777776642 1222220 0111
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeee--cCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQP--IHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~--~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
..+.+.+..+......... . .+....+.+.+.++|.++..... .....+.+|++.. ..+|++|||.+++.++
T Consensus 359 l~~~ie~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Pp-l~it~~eid~~~~~l~ 432 (447)
T PRK06917 359 LLIGVEFVADKKTKQPFSK--S---QAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPP-MTITYSELDELLSIFA 432 (447)
T ss_pred eEEEEEEeccCCcCCCCcc--h---hHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECC-CcCCHHHHHHHHHHHH
Confidence 2233333221110000000 0 12335678889999975422100 0111368998874 7799999999999998
Q ss_pred HHhhc
Q psy1785 624 RLGHD 628 (629)
Q Consensus 624 ~l~~~ 628 (629)
+..++
T Consensus 433 ~~l~~ 437 (447)
T PRK06917 433 KSVEE 437 (447)
T ss_pred HHHHH
Confidence 87543
No 349
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.48 E-value=0.00026 Score=78.30 Aligned_cols=316 Identities=9% Similarity=0.063 Sum_probs=163.7
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL---- 334 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl---- 334 (629)
..++.+.++++++-.-....|+.+||+|+..|++.||.... ..|.++. ..+|...+.-|-...-+..+.|-
T Consensus 99 ~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~----~rg~~~r-~~Ii~~~~~yHG~t~gals~~~~~~~~ 173 (453)
T PRK06943 99 AIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWR----NRGRGDK-REFVCLANGYHGETIGALGVTDVALFK 173 (453)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHH----HhCCCCC-CEEEEECCCcCCCcHHhhcccCChhhh
Confidence 34556667777653324689999999999999999987421 1232222 23455566667654333333221
Q ss_pred -----CCCCEEEEecCCCCC------------CCHHHHHHHHHHHHhCCCCcEEEEEee-CCCccccccC----HHHHHH
Q psy1785 335 -----GSDNVYLIKTDARGR------------MLPESLRGEIQRTLAEGAVPFMVSATS-GTTVLGAFDP----IPAIAD 392 (629)
Q Consensus 335 -----g~~~v~~V~~d~~g~------------~d~~~Le~~i~~~~~~g~~~~~Vvat~-Gtt~~G~idp----l~ei~~ 392 (629)
....+..+|...... -++++|++.++. .+...-.|++.- -....|.+-| ++++++
T Consensus 174 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~ 250 (453)
T PRK06943 174 DAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRA 250 (453)
T ss_pred cccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHHHHHHHH
Confidence 011344454432111 123556665542 222333444432 1222344332 789999
Q ss_pred HHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCC
Q psy1785 393 ICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 393 i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
+|++||+.+++ ..-|.-.... +.-..++|+. .|.+++ -|.++.- +..|.++++++ +.. .+....
T Consensus 251 lc~~~gillI~DEV~TG~GRtG~------~fa~~~~gv~--PDivt~--gKgl~gG~~Pi~av~~~~e-i~~-~~~~~~- 317 (453)
T PRK06943 251 LCDRYGVHLIADEIAVGCGRTGT------FFACEQAGVW--PDFLCL--SKGISGGYLPLSLVLSRDA-IFA-AFYDDD- 317 (453)
T ss_pred HHHHcCCEEEeechhhCCCCCcc------hhHHHhCCCC--CCeEee--ehhhccCcccceEEEEcHH-HHH-hhcccC-
Confidence 99999999988 3322211111 0011122342 799988 5777655 35788888774 332 221100
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC---CCcEEEccCCCce
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR---PGFKLVLDEPECT 546 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~---~g~~l~~~~p~~~ 546 (629)
.. ......+ | ..+.+......-.+|..+-.++ .+++..++.++|.+.|+++ +++.-+. -.-.
T Consensus 318 ----~~---~~~~~~~--T-~~gnpl~~aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~~vr--G~Gl 382 (453)
T PRK06943 318 ----VT---RGFLHSH--S-YTGNPLACRAALATLDLFAEDD---VLARNARKSARLRAALAPLAAHPQVRHLR--QRGT 382 (453)
T ss_pred ----cc---CCccCCC--C-CCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEEeEe--cccc
Confidence 00 0000001 1 1233333344444555554444 4455666777777777654 3332111 1111
Q ss_pred EEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 547 NISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 547 ~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.+.+.+..+. . . . ......+.+++.++|.++ .. .+ +.+|++.. ...|++|||.+++.|++..
T Consensus 383 ~~gvel~~~~----~-~-~-----~~~~~~i~~~~~~~Gll~-~~---~g--~~l~~~Pp-l~it~~eid~~~~~l~~al 444 (453)
T PRK06943 383 IFAFDVALDG----D-A-A-----RTFSRRFFEAALERELLL-RP---IG--TTVYLMPP-YVLDDDEIAWLAERTRATL 444 (453)
T ss_pred EEEEEEccCC----C-c-c-----hHHHHHHHHHHHHCCcEE-Ee---cC--CEEEEeCC-CcCCHHHHHHHHHHHHHHH
Confidence 2223332111 0 0 0 112346778899999654 21 12 46999984 7899999999999998765
Q ss_pred hc
Q psy1785 627 HD 628 (629)
Q Consensus 627 ~~ 628 (629)
++
T Consensus 445 ~~ 446 (453)
T PRK06943 445 DA 446 (453)
T ss_pred HH
Confidence 43
No 350
>PRK05839 hypothetical protein; Provisional
Probab=98.48 E-value=0.00015 Score=78.15 Aligned_cols=178 Identities=13% Similarity=-0.005 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC
Q psy1785 256 SLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG 333 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG 333 (629)
..+-+.+.+++.+..|. +..+.++|+|++++...++.+.... .+...|++..-+...+...+...|
T Consensus 63 ~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~------------~~gd~vlv~~P~y~~~~~~~~~~g 130 (374)
T PRK05839 63 ESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFD------------KQNPTIAYPNPFYQIYEGAAIASR 130 (374)
T ss_pred HHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcC------------CCCCEEEECCCCchhhHHHHHhcC
Confidence 34555666777777774 4577889999888765443332210 123356666666667778888899
Q ss_pred CCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 334 LGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 334 lg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
. +++.|+.++++.++++..+..+. .+.+|+.+...+-+|.+-+ +.+|.++|+++|+++.+ +|...
T Consensus 131 ~---~v~~v~~~~~~~~~~d~~~~~~~-------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~ 200 (374)
T PRK05839 131 A---KVLLMPLTKENDFTPSLNEKELQ-------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEI 200 (374)
T ss_pred C---EEEEeecccccCCcCCcchhhhc-------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhc
Confidence 8 99999997554333332222221 1345666677888888855 55666778999999999 76653
Q ss_pred cccccccccccccccc----ccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhh
Q psy1785 409 KLLTAPQQCSVFLTRR----NYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLT 461 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~----~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~ 461 (629)
. ...+. .+ ++... ....+. =.++.++-|.++.| +-+|.++.. +....
T Consensus 201 ~-~~~~~-~s-~~~~~~~~~~~~~~~--vi~~~SfSK~~~~~GlRiG~ii~~-~~~~~ 252 (374)
T PRK05839 201 Y-ENTPP-PS-LLEASILVGNESFKN--VLVINSISKRSSAPGLRSGFIAGD-ASILK 252 (374)
T ss_pred c-cCCCC-CC-HhhhhcccCccccCc--EEEEeccccccCCccceeEEEecC-HHHHH
Confidence 2 11110 00 00000 000112 26678999976544 557777763 34443
No 351
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.48 E-value=0.00043 Score=76.84 Aligned_cols=322 Identities=10% Similarity=0.039 Sum_probs=167.9
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC--
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG-- 335 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg-- 335 (629)
...++.+.+++++.-+.....|+++||+||..|++.||.... ..|.++. ..+|...+.-|-...-+..+.|..
T Consensus 91 ~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~----~~g~t~r-~~ii~~~~~yHG~t~ga~s~~~~~~~ 165 (466)
T PRK07030 91 PVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWR----NRGKPRK-KRFVTLTNSYHGETLAAMSVGDVALF 165 (466)
T ss_pred HHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHH----HhCCCCC-cEEEEECCCcCcccHHHHhccCCccc
Confidence 345556667776632224689999999999999999987521 1232222 235556666776654444433321
Q ss_pred -------CCCEEEEecCCCCC------------CCHHHHHHHHHHHHhCCCCcEEEEEee-CCCccccccC----HHHHH
Q psy1785 336 -------SDNVYLIKTDARGR------------MLPESLRGEIQRTLAEGAVPFMVSATS-GTTVLGAFDP----IPAIA 391 (629)
Q Consensus 336 -------~~~v~~V~~d~~g~------------~d~~~Le~~i~~~~~~g~~~~~Vvat~-Gtt~~G~idp----l~ei~ 391 (629)
...+..+|.....+ -+++.|++.|+. .+...-.|++.- .....|.+-| +++++
T Consensus 166 ~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr 242 (466)
T PRK07030 166 TETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLR 242 (466)
T ss_pred cccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHHHHHHHH
Confidence 01344454322111 123445555542 222333444432 1222344433 78999
Q ss_pred HHHHHcCCeEEE-----ecCc-cccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhh
Q psy1785 392 DICAEYDMADSV-----TWNP-HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECH 464 (629)
Q Consensus 392 ~i~~~~~~~lhV-----A~gg-~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~ 464 (629)
++|++||+.+++ .+|- +.++. ..++++. .|.+++ -|.++.-+ ..|.++++++ +... +
T Consensus 243 ~lc~~~g~llI~DEV~TGfGRtG~~~a----------~~~~gv~--PDiv~~--gKgl~gG~~Pi~av~~~~e-i~~~-~ 306 (466)
T PRK07030 243 EACDRYGVHLIHDEIAVGFGRTGTMFA----------CEQAGIR--PDFLCL--SKALTGGYLPLAAVLTTDT-VYQA-F 306 (466)
T ss_pred HHHHHcCCEEEEeehhhCcCccccchH----------HHhcCCC--CCEEee--ehhccCCcccceEEEecHH-HHHH-H
Confidence 999999999988 3331 12221 1122342 688888 57776553 5788888764 3322 2
Q ss_pred cCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CC
Q psy1785 465 SASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EP 543 (629)
Q Consensus 465 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p 543 (629)
....+-. .. ....+ | ..+.+......-.+|+.+-.++ .+++..++.++|++.|+++.....+.+ .-
T Consensus 307 ~~~~~~~---~~----~~h~~--T-~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG 373 (466)
T PRK07030 307 YDDYPTL---RA----FLHSH--S-YTGNPLACAAALATLDIFEQDN---VIENNRALARRMAEATAHLADHPHVAEVRQ 373 (466)
T ss_pred hcccccc---cc----cccCC--C-CCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHhcCCCEEEeEe
Confidence 1100000 00 00001 1 1233434444445566665554 456667788888888876522222220 01
Q ss_pred CceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 544 ECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 544 ~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.-..+.+.+..+..... +.. .. ......+.+++.++|.++ . +. + +.+|+... ...|++|||.+++.++
T Consensus 374 ~Gl~~gie~~~~~~~~~--~~~--~~-~~~~~~i~~~~~~~Gvl~-~--~~-g--~~i~~~Pp-l~it~~eid~~~~~l~ 441 (466)
T PRK07030 374 TGMILAIEMVQDKASKT--PYP--WQ-ERRGLKVYQHALERGALL-R--PL-G--SVVYFLPP-YVITPEQIDFLAEVAS 441 (466)
T ss_pred ceeEEEEEeccCccccc--cCc--ch-hHHHHHHHHHHHHCCeEE-E--ec-C--CEEEEECC-ccCCHHHHHHHHHHHH
Confidence 11223333321111000 000 00 012246788889999654 2 11 2 47999885 8899999999999998
Q ss_pred HHhhc
Q psy1785 624 RLGHD 628 (629)
Q Consensus 624 ~l~~~ 628 (629)
+..++
T Consensus 442 ~al~~ 446 (466)
T PRK07030 442 EGIDI 446 (466)
T ss_pred HHHHH
Confidence 87654
No 352
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.47 E-value=0.00012 Score=77.53 Aligned_cols=270 Identities=11% Similarity=0.047 Sum_probs=156.3
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV 339 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v 339 (629)
.+..+.+++.+|. .+.++|+|++++...+.. . .|...|++..-+.......++.+|+ ++
T Consensus 52 ~~Lr~~ia~~~~~--~~I~it~Gs~~al~~~~~-----~-----------~~gd~v~v~~P~y~~~~~~~~~~g~---~~ 110 (330)
T PRK05664 52 DGLEAAARAYYGA--PQLLPVAGSQAAIQALPR-----L-----------RAPGRVGVLSPCYAEHAHAWRRAGH---QV 110 (330)
T ss_pred HHHHHHHHHHhCC--CCEEECcCHHHHHHHHHH-----c-----------cCCCEEEEcCCChHHHHHHHHHcCC---eE
Confidence 3446677787775 378889988887654321 1 1334566666677778888999999 89
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHH---HHHHHHHHcCCeEEE--ecCcccccccc
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIP---AIADICAEYDMADSV--TWNPHKLLTAP 414 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~---ei~~i~~~~~~~lhV--A~gg~~l~~~~ 414 (629)
+.||.+ ++++.+.. +..|+.+..++-+|.+-+.+ +|.++|+++++++.+ +|....- ..
T Consensus 111 ~~v~~~--------~~~~~~~~-------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~-~~- 173 (330)
T PRK05664 111 RELDEA--------EVEAALDS-------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP-QH- 173 (330)
T ss_pred EEechh--------hHhhhhcC-------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC-cc-
Confidence 888763 34444421 22456667789999887654 555567889999988 7643221 01
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGR 493 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 493 (629)
+ +..... -+. =.++.++.|.++.| +-+|.++. ++.+..........+ + .
T Consensus 174 ---s-~~~~~~--~~~--vi~~~SfSK~~gl~GlRiG~~v~-~~~l~~~~~~~~~~~-----------------~--~-- 223 (330)
T PRK05664 174 ---S-LAACAH--RPG--LIVLRSFGKFFGLAGARLGFVLA-EPALLRALAELLGPW-----------------T--V-- 223 (330)
T ss_pred ---c-cccccc--CCC--EEEEeeccccccCCCcceEEEEe-CHHHHHHHHHhcCCC-----------------C--C--
Confidence 0 001000 011 26788999999854 55777776 434444322111000 0 0
Q ss_pred CcchHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhh
Q psy1785 494 KPDVLKFWFMWKAKGT-DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHK 572 (629)
Q Consensus 494 ~~~al~~w~~l~~~G~-~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~ 572 (629)
..+..+++..++.. .-.++..++..+..+++.+.|++. +++.. +...++ +|+..+.
T Consensus 224 --~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~---~~~~~f-~~~~~~~---------------- 280 (330)
T PRK05664 224 --SGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA---GGCALF-QWVRTED---------------- 280 (330)
T ss_pred --CHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc---CCcceE-EEEecCC----------------
Confidence 11222222222222 223455566666788899999886 65421 222122 2222110
Q ss_pred HHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 573 VAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 573 ~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
..++.+.|.++|..+.. .. ..+++|++++ . +++++++|+++|+++.++
T Consensus 281 -~~~~~~~l~~~gi~v~~---f~-~~~~iRis~~-~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 -AAALHEFLARRGILTRL---FE-QPASLRFGLP-A--DEADWARLDQALLAYRKE 328 (330)
T ss_pred -HHHHHHHHHHCCeEEEE---CC-CCCeEEEECC-C--CHHHHHHHHHHHHHHHhh
Confidence 12566778888876533 22 2358999996 3 688999999999987653
No 353
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.46 E-value=0.00028 Score=78.23 Aligned_cols=309 Identities=16% Similarity=0.123 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC---
Q psy1785 258 MEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL--- 334 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl--- 334 (629)
...++.+.++++++.......|+++||+++..|+..||.. .| .++ +|...+.-|-...-+..+.|-
T Consensus 114 ~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~-------tg---r~~-ii~~~~~yHG~t~~a~s~~~~~~~ 182 (459)
T PRK06082 114 TAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHI-------TG---NFK-VVSLWDSFHGASLDAISVGGEACF 182 (459)
T ss_pred HHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHh-------cC---CCE-EEEEeCCCcCccHHHHhhcCCccc
Confidence 3455566677777532246899999999999999999974 12 233 455566667665444443321
Q ss_pred ----C--CCCEEEEecCCCCC-----CC------HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHH
Q psy1785 335 ----G--SDNVYLIKTDARGR-----ML------PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADIC 394 (629)
Q Consensus 335 ----g--~~~v~~V~~d~~g~-----~d------~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~ 394 (629)
+ ...+..+|.....+ .| ++.|++.|+. .+ ....|+.--.....+.+-| +++++++|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~yl~~lr~lc 258 (459)
T PRK06082 183 RQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAYWKRVREIC 258 (459)
T ss_pred ccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHHHHHHHHHH
Confidence 0 11344454322111 11 2445555542 12 2223333221122233444 89999999
Q ss_pred HHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCCcc
Q psy1785 395 AEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASASYL 471 (629)
Q Consensus 395 ~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~yl 471 (629)
++||+.+++ ...|.-.... ++-....|+ . .|.++ .-|.++.-+ ..|.++.++. +. ..+. ..+
T Consensus 259 ~~~g~llI~DEV~tG~GRtG~------~fa~e~~gv-~-PDiv~--~gKgl~gG~~P~~av~~~~~-i~-~~~~--~~~- 323 (459)
T PRK06082 259 DKHNVLLIIDEIPNGMGRTGE------WFTHQAYGI-E-PDILC--IGKGLGGGLVPIAAMITKDK-YN-TAAQ--ISL- 323 (459)
T ss_pred HHcCCEEEEechhhCCCccch------hhHhHhhCC-C-CCEEE--ecccccCCCCcceEEEEcHH-HH-hhcc--CCC-
Confidence 999999988 4443211111 001112244 3 78888 478887653 5788888764 22 2111 000
Q ss_pred ccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEEE
Q psy1785 472 FQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNIS 549 (629)
Q Consensus 472 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v~ 549 (629)
...| -.+.+..+...-.+++.+-.++ .+++..++.++|++.|+++. ...++.+ .-.-..+.
T Consensus 324 -------------~~~T-~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ 386 (459)
T PRK06082 324 -------------GHYT-HEKSPLGCAAALATIEVIEQEG---LLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWG 386 (459)
T ss_pred -------------CCCC-CCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeE
Confidence 0001 1233333444445566554444 55667778888888887641 1222220 01112223
Q ss_pred EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 550 FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 550 F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+..+.... .. .......+...+.++|.++ .. . + .+++|++.- ..+|++|||.+++.+++...
T Consensus 387 ve~~~~~~~~-~~-------~~~~~~~~~~~~~~~Gvl~-~~--~-~-~~~i~~~Pp-l~it~~eid~~~~~l~~~l~ 450 (459)
T PRK06082 387 VELVTDRHTK-ER-------AYDEAEAVLYRCLNNGLSF-KV--S-Q-GNVIQLSPP-LIITREELTQALAILEEAIA 450 (459)
T ss_pred EEEccCcccc-Cc-------cHHHHHHHHHHHHhCCCEE-Ee--c-C-CCEEEEeCC-CccCHHHHHHHHHHHHHHHH
Confidence 3332110000 00 0112346778888999754 22 1 1 268999884 67899999999999987654
No 354
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.46 E-value=0.00011 Score=81.47 Aligned_cols=301 Identities=13% Similarity=0.085 Sum_probs=155.3
Q ss_pred eEEe-CCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-------C--CCCEEEEecCC
Q psy1785 277 GIFC-PGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL-------G--SDNVYLIKTDA 346 (629)
Q Consensus 277 g~~~-~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl-------g--~~~v~~V~~d~ 346 (629)
..|+ ++||+|+..|++.||.. .| ...+|...+.-|-...-+..+.|- + ..++..+|...
T Consensus 129 v~f~~~SGSEAve~AlklAr~~-------tg----r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~ 197 (464)
T PRK06938 129 IQFCGPTGTDAVEAALKLVKTA-------TG----RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPY 197 (464)
T ss_pred EEEeCCCcHHHHHHHHHHHHHh-------hC----CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCc
Confidence 4565 69999999999999864 12 233555666667655444443221 0 12455666532
Q ss_pred CCC------------CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 347 RGR------------MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 347 ~g~------------~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
..+ .+++.|++.+++........-.|++---....|.+-| +++++++|++||+.+++ ..-|.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGf 277 (464)
T PRK06938 198 DYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGF 277 (464)
T ss_pred cccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence 211 1356677766532111112333433322223354433 78999999999999988 22221
Q ss_pred ccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCcc
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKH 488 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 488 (629)
-.... +.-..++|+. .|.+++ -|.++.-+..|.++.++. + ..+. +.+. .+ |
T Consensus 278 GRtG~------~~a~e~~gv~--PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~~------------~~--T 328 (464)
T PRK06938 278 GRTGK------MFAFEHAGII--PDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGAH------------AG--T 328 (464)
T ss_pred CcCcH------HHHHHhcCCC--CCEEEe--eccccCCCceEEEeehhH--h-hccC--CCCC------------CC--C
Confidence 11110 0011122342 689888 577776677888888764 2 2221 1110 00 1
Q ss_pred CCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCCceEEEEEeeCCC-CCCCCchhh
Q psy1785 489 IQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPECTNISFWYIPPS-LRGKEDQAD 565 (629)
Q Consensus 489 ~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~~~~v~F~~~p~~-~~~~~~~~~ 565 (629)
-.+.+.........|+.+-.++ .+++..++.++|.+.|+++. ...++.+ .-.-..+.+.+..+. .....+...
T Consensus 329 -~~gnpla~Aaa~a~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~ 404 (464)
T PRK06938 329 -FRGNQMAMAAGSATLRYIKEHR---LAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPP 404 (464)
T ss_pred -CCcCHHHHHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCC
Confidence 1233334444445566555544 44556667777777776531 1222220 011122333332211 000000000
Q ss_pred HHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 566 FNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 566 ~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.. ......+.+.+.++|.++ ... ....+.||+... ...|++|||.+++.+++...+
T Consensus 405 ~~---~~~~~~~~~~~~~~Gll~-~~~--g~~~~~l~~~Pp-l~it~~eid~~~~~l~~~l~~ 460 (464)
T PRK06938 405 AN---GELASLIQRECLRRGLIL-ELG--GRHGSVVRFLPP-LIITAEQIDEVAEIFAEAVAA 460 (464)
T ss_pred cc---HHHHHHHHHHHHHCCeEE-eec--CCCCCEEEEECC-CccCHHHHHHHHHHHHHHHHH
Confidence 00 122346778888999654 221 112368999985 889999999999999886543
No 355
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.45 E-value=0.00043 Score=75.60 Aligned_cols=309 Identities=11% Similarity=0.085 Sum_probs=159.3
Q ss_pred ccccChhHHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 248 TYEVSPVFSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 248 ~~~~~p~~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
.|...+....+-+.+.+++.+..|+ +..+.++|+|++++... +.... .|...|++..-+....
T Consensus 71 ~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~-l~~~~--------------~~gd~V~v~~P~Y~~~ 135 (409)
T PRK07590 71 GYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGN-ILDIF--------------GPDNTIAVTDPVYPVY 135 (409)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHH-HHHhc--------------CCCCEEEEeCCCCcch
Confidence 3444455545555555565555454 45678889988887543 22111 1334455555566667
Q ss_pred HHHHHHcCCCC--------CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHH
Q psy1785 326 KKLAAFEGLGS--------DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADIC 394 (629)
Q Consensus 326 ~kaa~~lGlg~--------~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~ 394 (629)
..+++..|.-. .+++.||++.++.+.++ +++ ..+.+|..+...+-+|.+-+ +.+|.++|
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d-~~~---------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a 205 (409)
T PRK07590 136 VDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPE-LPE---------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYA 205 (409)
T ss_pred HHHHHHcCCcccccccccccceeEeecccccCCccc-Ccc---------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHH
Confidence 78888888710 02888998754433322 111 13445655677888888865 55667778
Q ss_pred HHcCCeEEE--ecCccccccccccccccccccccccCCc--ceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcC---
Q psy1785 395 AEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVV--ADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSA--- 466 (629)
Q Consensus 395 ~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~g--aDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~--- 466 (629)
+++++++.+ +|+....-.. +.. ... .++.. --.+..++-|.++.| +-+|.++..+ .++......
T Consensus 206 ~~~~~~iI~De~Y~~~~~~~~---~~~--~~~--~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~-~li~~~~~~~~~ 277 (409)
T PRK07590 206 KENGSLILFDAAYEAFISDPS---LPH--SIY--EIEGARECAIEFRSFSKTAGFTGTRCAYTVVPK-ELKGKTSDGEGV 277 (409)
T ss_pred HHcCeEEEEEccchhhccCCC---CCc--chh--hCCCcccceEEEecCccccCCcCceeEEEEcCH-HHhhhccccchh
Confidence 999999988 7765332110 000 000 11110 124567999999754 4577776643 343311000
Q ss_pred --CCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhc---ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc
Q psy1785 467 --SASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAK---GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD 541 (629)
Q Consensus 467 --~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~---G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~ 541 (629)
...+..... ... . ....+..+++..++ +..-+++..+...+..+.+.+.|++. ++++.
T Consensus 278 ~~~~~~~~~~~-----------~~~-~--~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-- 340 (409)
T PRK07590 278 SLNSLWNRRQS-----------TKF-N--GVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVY-- 340 (409)
T ss_pred hhHHHHHHHHh-----------hcc-c--CcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcee--
Confidence 000000000 000 0 01122223222222 23344555566666778888999887 77754
Q ss_pred CCCceEE-EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHh-cCcEEEeeeecC-CccceEEEeecCCCCCHHHHHHH
Q psy1785 542 EPECTNI-SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMK-SGSMMITYQPIH-ALPNFFRLVLQNSALDHSDMDYF 618 (629)
Q Consensus 542 ~p~~~~v-~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~-~G~~~i~~~~~~-~~~~~lR~~~~n~~~t~edid~l 618 (629)
+|..+.+ .+++ |.... . .++.+.+.+ .|.++....... ...++||+++. .++++++..
T Consensus 341 ~~~g~~f~wi~~-~~~~~----~-----------~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~ 401 (409)
T PRK07590 341 GGVNAPYIWVKT-PDGMS----S-----------WDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF---GSRENVLEA 401 (409)
T ss_pred cCCcceEEEEEC-CCCCC----H-----------HHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc---CCHHHHHHH
Confidence 3444333 2332 22111 0 234555654 565443322221 11358999963 367888888
Q ss_pred HHHHHHH
Q psy1785 619 IDEIERL 625 (629)
Q Consensus 619 ~~~i~~l 625 (629)
++.|.++
T Consensus 402 l~rl~~~ 408 (409)
T PRK07590 402 MERIKKA 408 (409)
T ss_pred HHHHHhh
Confidence 7777653
No 356
>PRK08637 hypothetical protein; Provisional
Probab=98.44 E-value=0.00024 Score=77.04 Aligned_cols=290 Identities=11% Similarity=0.028 Sum_probs=150.2
Q ss_pred CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH-HHcCCCCCCEEEEecC-CCCCCCHH
Q psy1785 276 DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA-AFEGLGSDNVYLIKTD-ARGRMLPE 353 (629)
Q Consensus 276 ~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa-~~lGlg~~~v~~V~~d-~~g~~d~~ 353 (629)
+.++|+|++++...++.+... |...|++..-++......+ ...|. +++.||.+ +++.+|++
T Consensus 71 ~I~it~G~~~al~~~~~~l~~--------------~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~~~~~d~~ 133 (388)
T PRK08637 71 LPIVTNALTHGLSLVADLFVD--------------QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDEDGGFDTD 133 (388)
T ss_pred eeeEccchHHHHHHHHHHhcC--------------CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCCCCcCCHH
Confidence 567888888876555443211 3344555555555666654 45787 89999984 55679999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHH-----cCCeEEE--ecCccccccccccccccccc
Q psy1785 354 SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAE-----YDMADSV--TWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 354 ~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~-----~~~~lhV--A~gg~~l~~~~~~~~~~l~~ 423 (629)
+|++.+.... .....+++.+...+.+|.+-+ +.+|.++|++ +++++.+ +|.....-..+. .+.+...
T Consensus 134 ~l~~~~~~~~--~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~-~~~~~~~ 210 (388)
T PRK08637 134 ALKEALQAAY--NKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYK-ESLFAAL 210 (388)
T ss_pred HHHHHHHhhc--cCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccc-hhhHHHh
Confidence 9999886321 123345556667888887754 5566666664 8998888 666543211100 0000000
Q ss_pred cccccCCcceEEE-eCCCCCCCCC-CccEEEEEec-----cchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcc
Q psy1785 424 RNYVIEVVADSVT-WNPHKLLTAP-QQCSVFLTRH-----QSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPD 496 (629)
Q Consensus 424 ~~~~i~~gaDsv~-~~~HK~l~~P-~~~g~ll~r~-----~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 496 (629)
.+. -+. +-.+. .+..|.++.| .=+|.+.+.. +.+.+........++.. +..+ ..
T Consensus 211 ~~~-~~~-vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~--------------~~~~---~s 271 (388)
T PRK08637 211 ANL-HSN-ILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRS--------------NISN---GP 271 (388)
T ss_pred hcc-ccc-ceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhc--------------ccCC---CC
Confidence 000 012 32332 3888865555 4488887643 33332211000000000 0001 11
Q ss_pred hHHHHHHHHhcChhhHHHHHHH----HHHHHHHHHHHHhcC---CCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHH
Q psy1785 497 VLKFWFMWKAKGTDGLEAHIDK----SFDNAKYFTDKIRHR---PGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNEL 569 (629)
Q Consensus 497 al~~w~~l~~~G~~G~~~~~~~----~~~la~~l~~~L~~~---~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~ 569 (629)
.+...++...+....+.+++++ ..+..+.+.+.|++. +++++. +|..+.+ +|+.-+.
T Consensus 272 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~--~~~~g~~-~~~~l~~------------- 335 (388)
T PRK08637 272 HPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAY--PFNSGYF-MCLKLKG------------- 335 (388)
T ss_pred cHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccc--cccceEE-EEecCCh-------------
Confidence 2223333333433445444433 223334455556554 245543 3444433 4432111
Q ss_pred HhhHHHHHHHHHH-hcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 570 LHKVAPKIKERMM-KSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 570 l~~~~~~i~~~l~-~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
.+ ..++.+.+. ++|..... . + .+++|++++ ..++++++..++.|.++.++|
T Consensus 336 ~~--~~~l~~~l~~~~gv~~~~---~-~-~~~iRi~~~--~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 VD--AEELRVHLLEKYGIGTIA---L-N-ETDLRIAFS--CVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred HH--HHHHHHHHhhhcceEEEe---c-c-CCceEEEee--cCCHHHHHHHHHHHHHHHHhc
Confidence 00 135666775 45754332 2 2 358999996 377899999998888876653
No 357
>PRK07046 aminotransferase; Validated
Probab=98.44 E-value=0.00022 Score=78.86 Aligned_cols=306 Identities=14% Similarity=0.137 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHH----
Q psy1785 256 SLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAF---- 331 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~---- 331 (629)
...+.++.+.+++++++ ....|+.+||+|+..|++.||..- | ...++...+.-|-....+...
T Consensus 114 ~~~~~~lAe~l~~~~~~--~~v~F~nSGtEA~e~AlrlAR~~T-------G----r~~ii~~~g~YHG~~d~~l~~~~~~ 180 (453)
T PRK07046 114 SEDAAWVGEELARRFGL--PYWQVATTATDANRFVLRWARAVT-------G----RPKILVFNGCYHGTVDDVFVDLVDG 180 (453)
T ss_pred CHHHHHHHHHHHHHhCC--CEEEEECCHHHHHHHHHHHHHHhh-------C----CCEEEEECCCCCCCcHHhHhhccCC
Confidence 34566677778888754 468999999999999999999751 2 233454555566542222111
Q ss_pred --------cCCC---CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHH
Q psy1785 332 --------EGLG---SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAE 396 (629)
Q Consensus 332 --------lGlg---~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~ 396 (629)
.|+. ...+..+|. -|++.|++.+.. + ..-.|+.---....|.+-| +++++++|++
T Consensus 181 ~~~~~~~~~g~~~~~~~~~~~~~~-----nd~~~l~~~l~~----~-~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~ 250 (453)
T PRK07046 181 RPVQRPGLLGQVHDLTATTRVVEF-----NDLAALEAALAD----G-DVAAVLAEPAMTNIGMVLPEPGFHEALRELTRR 250 (453)
T ss_pred CCCCCCCCCCCCccccCceEeeCC-----CCHHHHHHHhCC----C-CeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 1110 112333333 278888887731 2 2334444433333455655 7999999999
Q ss_pred cCCeEEE--ec----CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCc
Q psy1785 397 YDMADSV--TW----NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASY 470 (629)
Q Consensus 397 ~~~~lhV--A~----gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~y 470 (629)
||+.+++ .. |.+- .. . .+++ . .|.+++ -|.++.-+.+|++..|++ +... +.. +
T Consensus 251 ~g~llI~DEV~tfr~g~Gg-~~---------~--~~gv-~-PDi~t~--gK~lggG~Pi~av~g~~~-i~~~-~~~---~ 309 (453)
T PRK07046 251 YGTLLVIDETHTISSGPGG-YT---------R--AHGL-E-PDFLVV--GKPIAGGVPCAVYGFSAE-LAER-AQA---A 309 (453)
T ss_pred hCCEEEEEccccCccCCcc-hh---------H--HhCC-C-ccceee--hhhhcCCCcceeeeehHH-HHHH-Hhh---c
Confidence 9999988 32 2111 00 1 1134 2 688875 688876677899888764 3332 210 0
Q ss_pred cccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC---CCc--EEEccCCCc
Q psy1785 471 LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR---PGF--KLVLDEPEC 545 (629)
Q Consensus 471 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~---~g~--~l~~~~p~~ 545 (629)
-..... ......+ |+ .+.+........+|+.+-.++ ..++..++.++|++.|+++ -++ .+.. ....
T Consensus 310 ~~~~~~--~~~~~~~--T~-~gnpl~~aa~~a~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g-~G~~ 380 (453)
T PRK07046 310 KASAPP--GHSGIGT--TL-SANALAMAAMRATLAEVMTEA---AYAHMLALAARLAAGLRAVIARHGLPWHVTR-VGAR 380 (453)
T ss_pred cccCCC--CCceeCC--CC-cccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEE-eCcE
Confidence 000000 0000000 11 122333334444555553333 3555666777777777542 132 2222 1222
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHH-hhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELL-HKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l-~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
+.+.+.+...+.. .+..+.. .++...+...|.++|.++ . +. + +.++++. .+|++|||.+++.+++
T Consensus 381 --~~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Gv~~-~--~~-~--~~~~~~p---~~t~~did~~~~~~~~ 446 (453)
T PRK07046 381 --VEFQFAPTPPRNG---AEAAAALDPELEAALHLYLLNRGVLI-T--PF-H--NMMLVCP---ATTAADVDRLVAAFDA 446 (453)
T ss_pred --EEEEEeCCCCCCH---HHHhcccCHHHHHHHHHHHHHCCCEE-e--cc-c--CcEEEeC---CCCHHHHHHHHHHHHH
Confidence 3333322211110 0000000 113346778888999654 2 11 2 3466554 4899999999999988
Q ss_pred Hhhc
Q psy1785 625 LGHD 628 (629)
Q Consensus 625 l~~~ 628 (629)
..++
T Consensus 447 ~l~~ 450 (453)
T PRK07046 447 CLGE 450 (453)
T ss_pred HHHH
Confidence 7654
No 358
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.43 E-value=0.00014 Score=78.07 Aligned_cols=276 Identities=15% Similarity=0.105 Sum_probs=153.6
Q ss_pred HHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC-------
Q psy1785 261 HVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG------- 333 (629)
Q Consensus 261 ~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG------- 333 (629)
+..+.+++++|+ ....|+++||+|+..|++.||... | .+.+|..+..-|-+..-+....+
T Consensus 70 ~la~~l~~~~~~--~~v~~~~SGseA~e~Alklar~~~-------g----r~~Ii~~~~syHG~t~~~ls~~~~~~~~~~ 136 (364)
T PRK04013 70 EMLEELSKWVNY--EYVYMGNSGTEAVEAALKFARLYT-------G----RKEIIAMTNAFHGRTMGALSATWKPKYRED 136 (364)
T ss_pred HHHHHHHhhcCC--CEEEEeCchHHHHHHHHHHHHHHh-------C----CCEEEEECCccccCchhhccCCCCcccccC
Confidence 334456666655 368999999999999999998751 2 13456666667765443333211
Q ss_pred CC--CCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc-cC---HHHHHHHHHHcCCeEEE--ec
Q psy1785 334 LG--SDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF-DP---IPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 334 lg--~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i-dp---l~ei~~i~~~~~~~lhV--A~ 405 (629)
.+ ...+..+|.+ |++.+++.+.+ ....|+..--....|.+ -| +++++++|++||+.+++ ..
T Consensus 137 ~~p~~~~~~~~~~~-----d~~~l~~~i~~------~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~ 205 (364)
T PRK04013 137 FEPLVPGFKHIPFN-----DVEAAKEAITK------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQ 205 (364)
T ss_pred CCCCCCCcEEecCC-----CHHHHHHHhcC------CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 11 1133444432 67778777742 23344444323233333 33 99999999999999988 43
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSG 485 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 485 (629)
.|. -... +.....+++. .|.+++ -|.++.-+..|.++.+.. . . ... . ..
T Consensus 206 tG~-RtG~------~~a~~~~gv~--PDiv~~--gK~lggG~P~~a~~~~~~-~-~------~~~--~----------~~ 254 (364)
T PRK04013 206 SGL-RTGK------FLAIEHYKVE--PDIVTM--GKGIGNGVPVSLTLTNFD-V-E------RGK--H----------GS 254 (364)
T ss_pred hcC-CCCc------hhHHHhcCCC--CCEEEe--cccccCCceeEEEEeccc-c-c------CCC--c----------CC
Confidence 332 2211 0011111332 688888 577766566788877653 1 1 000 0 00
Q ss_pred CccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhh
Q psy1785 486 DKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQAD 565 (629)
Q Consensus 486 ~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~ 565 (629)
| -.+.+.........++.+-.+++.+++++. |. .+.. +.+.-+. -.-..+.+.+..+
T Consensus 255 --T-~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l~-~l~~-~~v~~vR--G~Gl~~gve~~~~---------- 311 (364)
T PRK04013 255 --T-FGGNPLACKAVAVTLRILRRERLVEKAGEK------FI-EIKG-ERVVTTR--GRGLMIGIVLKKP---------- 311 (364)
T ss_pred --C-CCcCHHHHHHHHHHHHHHHhccHHHHHHHH------HH-Hhcc-Ccceeee--eCcEEEEEEeCCc----------
Confidence 1 133444555555667777677766665543 22 2222 2111111 0111122222110
Q ss_pred HHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 566 FNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 566 ~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
...+.+.+.++|.+. .. .+ .+++|+... ...|++|+|.+++.|++..++
T Consensus 312 --------~~~i~~~~~~~Gll~-~~---~g-~~vlr~~Pp-l~it~~~i~~~~~~l~~~l~~ 360 (364)
T PRK04013 312 --------VGKYVEELQNRGYLV-HT---AG-QRVIRLLPP-LIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred --------HHHHHHHHHhCCcEE-ee---CC-CCEEEEeCC-cccCHHHHHHHHHHHHHHHHH
Confidence 125677888899654 21 12 268999985 788999999999999887653
No 359
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.42 E-value=0.00031 Score=77.11 Aligned_cols=309 Identities=9% Similarity=-0.019 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC---
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG--- 335 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg--- 335 (629)
..++.+++++++.-+-....|+.+||+|+..|++.||... ...|- +.+ -+|...+.-|-...-+..+.+-.
T Consensus 88 ~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~----~~~g~-~r~-kii~~~~~yHG~t~~a~s~~~~~~~~ 161 (428)
T PRK07986 88 AIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYW----QAKGE-PRQ-RFLTLRHGYHGDTFGAMSVCDPDNSM 161 (428)
T ss_pred HHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHH----HhcCC-CCc-EEEEECCCcCCCcHhhhcccCCchhh
Confidence 3455566767664322468999999999999999999742 11121 122 34556666676443333322210
Q ss_pred -------CCCEEEEecCCCC------CCCHHHHHHHHHHHHhCCCCcEEEEEeeC-CCcccc----ccCHHHHHHHHHHc
Q psy1785 336 -------SDNVYLIKTDARG------RMLPESLRGEIQRTLAEGAVPFMVSATSG-TTVLGA----FDPIPAIADICAEY 397 (629)
Q Consensus 336 -------~~~v~~V~~d~~g------~~d~~~Le~~i~~~~~~g~~~~~Vvat~G-tt~~G~----idpl~ei~~i~~~~ 397 (629)
...+..+|..... .-|+++|++.++. .+...-.|+.--. ....|. -+.|++|+++|++|
T Consensus 162 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~ 238 (428)
T PRK07986 162 HSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE 238 (428)
T ss_pred hhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHc
Confidence 0123344432111 1255677776653 2222223333211 122232 24499999999999
Q ss_pred CCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCC-Ccccc
Q psy1785 398 DMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASA-SYLFQ 473 (629)
Q Consensus 398 ~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~-~yl~~ 473 (629)
|+.+++ +.-|.-.....+ -....|+. .|.+++ -|.++.- +.+|+++++++ +.+ .+.... ..+..
T Consensus 239 g~lLI~DEv~tG~GrtG~~f------a~~~~gv~--PDi~t~--gK~l~gG~~p~~av~~~~~-i~~-~~~~~~~~~~~~ 306 (428)
T PRK07986 239 GILLIADEIATGFGRTGKLF------ACEHAGIA--PDILCL--GKALTGGTMTLSATLTTRE-VAE-TISNGEAGCFMH 306 (428)
T ss_pred CCEEEEeccccCCccCCCee------eecccCCC--CCEEEe--chhhhCCcccCcchhchHH-HHH-HhhcCCCCcccc
Confidence 999998 443321111100 01112332 588874 6887654 35677777653 332 221110 00000
Q ss_pred CCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEe
Q psy1785 474 KDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWY 552 (629)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~ 552 (629)
.. |. .+.+..+.....+|+.+-.++ ..++..++.++|++.|+++.....+.+ .-.-..+.+.+
T Consensus 307 ----------~~--T~-~g~p~~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~ 370 (428)
T PRK07986 307 ----------GP--TF-MGNPLACAVANASLSLLESGD---WQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVET 370 (428)
T ss_pred ----------CC--CC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEe
Confidence 01 11 233445556666677665554 356677788888888876422222220 01112222322
Q ss_pred eCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 553 IPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 553 ~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..+. .+..+.+.+.++|.++ . +. + +.+|++.. ...|++||+.+++.|++..+
T Consensus 371 ~~~~----------------~~~~~~~~l~~~Gl~~-~--~~-g--~~i~~~Pp-l~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 371 TRPV----------------NMAALQRFFVEQGVWI-R--PF-G--KLIYLMPP-YIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred CCcc----------------cHHHHHHHHHHCCcEE-E--ec-C--CEEEEeCC-CCCCHHHHHHHHHHHHHHHh
Confidence 1110 0135778888999653 2 11 3 57999985 78999999999999987653
No 360
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.42 E-value=0.00017 Score=78.43 Aligned_cols=155 Identities=12% Similarity=0.039 Sum_probs=100.2
Q ss_pred EEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec-C-CCCCCCHHHH
Q psy1785 278 IFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT-D-ARGRMLPESL 355 (629)
Q Consensus 278 ~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~-d-~~g~~d~~~L 355 (629)
++|+|++++...++...... .|...|++..-+......+++..|+ +++.+|. + +++.+|++.|
T Consensus 98 ~iT~Ga~~al~~~~~~l~~~------------~pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l 162 (396)
T PRK09257 98 VQTPGGTGALRVGADFLKRA------------FPDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAM 162 (396)
T ss_pred EecCCccHHHHHHHHHHHHh------------CCCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHH
Confidence 78999999877665432210 1444677777777778888999999 9999997 3 3468999999
Q ss_pred HHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCC
Q psy1785 356 RGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEV 430 (629)
Q Consensus 356 e~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~ 430 (629)
++.+... .....+++.....+-+|.+- .+.+|.++|++|++++.. +|.....-..+ +...+...... -+.
T Consensus 163 ~~~~~~~---~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~-~~~~~~~~~~~-~~~ 237 (396)
T PRK09257 163 LADLSQA---PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEE-DAYGLRAFAAA-GLE 237 (396)
T ss_pred HHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHH-HHHHHHHHHhc-CCc
Confidence 9887642 12235566677778888774 466777889999999988 77653311000 00000011100 012
Q ss_pred cceEEEeCCCCCCCC-CCccEEEEE
Q psy1785 431 VADSVTWNPHKLLTA-PQQCSVFLT 454 (629)
Q Consensus 431 gaDsv~~~~HK~l~~-P~~~g~ll~ 454 (629)
+ .++.++-|.++. -+-+|.+++
T Consensus 238 -v-i~i~SfSK~~~~~GlRiG~~~~ 260 (396)
T PRK09257 238 -L-LVASSFSKNFGLYGERVGALSV 260 (396)
T ss_pred -E-EEEEEcCCcCccccccceeEEE
Confidence 2 567899999986 455788764
No 361
>KOG3846|consensus
Probab=98.39 E-value=3.9e-05 Score=77.11 Aligned_cols=282 Identities=16% Similarity=0.195 Sum_probs=170.2
Q ss_pred CCcchHHHHHHHHcCCCCC-CEEEEecCC-CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q psy1785 319 EDAHYSIKKLAAFEGLGSD-NVYLIKTDA-RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE 396 (629)
Q Consensus 319 ~~~H~Si~kaa~~lGlg~~-~v~~V~~d~-~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~ 396 (629)
...||.+..-+++-|+..+ ..+.|...+ ...+..+++-+.|++ +|.....|..+.....+|..-++.+|...-+.
T Consensus 166 PSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~ 242 (465)
T KOG3846|consen 166 PSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQF 242 (465)
T ss_pred CchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccC
Confidence 3569999999999998543 345555433 235677766666654 56666667777778889999999999854444
Q ss_pred cCCeEEEecCcccccc-ccccccccccccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 397 YDMADSVTWNPHKLLT-APQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 397 ~~~~lhVA~gg~~l~~-~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
.|+.+ .|+..-.+. .|+ ... .+|+|..+|...|++.+ +-+.|.+++-++ ..+.....-+.+..+.
T Consensus 243 kgc~V--GfDLAHAvgNVpL------~LH----dWgVDFACWCSYKYlnaGaGgIgGlFvHek-h~~~~~prl~GWwgh~ 309 (465)
T KOG3846|consen 243 KGCLV--GFDLAHAVGNVPL------QLH----DWGVDFACWCSYKYLNAGAGGIGGLFVHEK-HTKESLPRLAGWWGHD 309 (465)
T ss_pred CCcEe--chhhhhhhcCCce------EEe----ecCCceEEEeeecccccCCCccceeeeehh-hhcchhhHHhhhccCC
Confidence 45543 222211111 111 111 35899999999999965 555777777553 2222111112222211
Q ss_pred CcC---CCc--ccCCCCccCCCCCCc--chHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceE
Q psy1785 475 DKF---YDT--KYDSGDKHIQCGRKP--DVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTN 547 (629)
Q Consensus 475 ~~~---~~~--~~~~~~~~~~~sr~~--~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~ 547 (629)
... -+. ....|..++..|++. ...++..+++.+..-.+.++.++.+-++.|+...|+...|.+- +-...-
T Consensus 310 ~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~---~~rt~K 386 (465)
T KOG3846|consen 310 PSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKH---PLRTEK 386 (465)
T ss_pred cchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCc---hhhhcc
Confidence 100 011 123444444445553 5677778888888888999999999999999999887655431 001111
Q ss_pred EEEEe-eCCCC--CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 548 ISFWY-IPPSL--RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 548 v~F~~-~p~~~--~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
..|.+ .|... ||.+ +.-.++.-++.+.+.|.++|.+. -...+|.||++....+++-.||-.+++.+.+
T Consensus 387 l~~~IiTP~~~~erGcQ----Lsl~Fssp~~~vfqeL~krGv~~-----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e 457 (465)
T KOG3846|consen 387 LFFTIITPTSTDERGCQ----LSLYFSSPTPKVFQELHKRGVIG-----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNE 457 (465)
T ss_pred eeEEEeCCcccccccce----EEEEeCCCchHHHHHHHHcCeec-----cccCCCceEeecchhhccHHHHHHHHHHHHH
Confidence 12222 22221 1111 00011222357888899999642 1234689999998789999999999999998
Q ss_pred Hhhc
Q psy1785 625 LGHD 628 (629)
Q Consensus 625 l~~~ 628 (629)
+...
T Consensus 458 ~~d~ 461 (465)
T KOG3846|consen 458 AMDK 461 (465)
T ss_pred HHHH
Confidence 7654
No 362
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.39 E-value=7.2e-05 Score=77.60 Aligned_cols=305 Identities=15% Similarity=0.157 Sum_probs=169.7
Q ss_pred ccChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 250 EVSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 250 ~~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
..+..+..+-.++.+.+++|+++|+ ....|..||-.+-+.++..-+-.. .+..-+.+-.-+..+...+
T Consensus 43 HRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~-----------~~~~yv~~g~Ws~~a~~eA 111 (365)
T COG1932 43 HRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGK-----------RGTDYVDTGAWSEFAIKEA 111 (365)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcc-----------cCceeEeeeehhHhHHHHH
Confidence 3567778888899999999999998 467788877666555544333210 0110233333444445444
Q ss_pred HHHcC-CCCCCEEEEecCC--CCC-CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHcCCeEEE
Q psy1785 329 AAFEG-LGSDNVYLIKTDA--RGR-MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF-DPIPAIADICAEYDMADSV 403 (629)
Q Consensus 329 a~~lG-lg~~~v~~V~~d~--~g~-~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i-dpl~ei~~i~~~~~~~lhV 403 (629)
-++.. + ++..+...+ -|. .+++..+ +.+ .--.|..++..|..|.- .+.+.+.. +..+.+
T Consensus 112 ~~~~~~~---~~~~~~~~~~~~~~iP~~~~~~--~~~------~~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v~ 175 (365)
T COG1932 112 KKVGKQP---KLIDARIEEAGYGSIPDLSKWD--FSD------NDAYVHFCWNETISGVEVPELPDIGS-----DGLLVA 175 (365)
T ss_pred HHhcccc---cccccceeccCccCCCChhhcc--cCC------CccEEEEecCCcccceEccCCCCCCC-----CceEEE
Confidence 44333 2 222222111 222 2333221 111 12247778888888863 22221111 112222
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
-.... .++.| +.+.. .|.+.+.+||.+| |-|.+++++|++ ++.++.+..-+-++.
T Consensus 176 D~SS~-ilsr~-----------iDvsk-~dviyagaQKnlG-paGltvvIvr~~-~l~r~~~~~~P~if~---------- 230 (365)
T COG1932 176 DASSA-ILSRP-----------IDVSK-YDVIYAGAQKNLG-PAGLTVVIVRPD-LLERAESYTLPSIFD---------- 230 (365)
T ss_pred ecccH-HhcCC-----------CChhH-cceEEEehhhccC-ccceEEEEEcHH-HHhcccccCCchHhh----------
Confidence 11111 12221 13556 8999999999997 888999999884 565543321111111
Q ss_pred CCCccCCCC-CC-cchHHHHH---HHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEE-Ec-c-CCCceEEEEEeeC
Q psy1785 484 SGDKHIQCG-RK-PDVLKFWF---MWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKL-VL-D-EPECTNISFWYIP 554 (629)
Q Consensus 484 ~~~~~~~~s-r~-~~al~~w~---~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l-~~-~-~p~~~~v~F~~~p 554 (629)
+.......+ -. ...+.+++ .++.+ ..-|++++.++..+.++.|++.+.+. +|-. .. + .....+|||.+..
T Consensus 231 y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~~ 309 (365)
T COG1932 231 YLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLVD 309 (365)
T ss_pred chhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcCc
Confidence 110000011 01 12233322 23322 45689999999999999999999997 6532 11 1 2456789998752
Q ss_pred CCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 555 PSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 555 ~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
. + |+ +.+.+.+.+.|.+....... ++-+|+++- ....-++++.|++-++.+.+
T Consensus 310 ~---------~----ld---~~fv~eae~~gl~~lkGhr~---vgGmRasiy-nA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 310 A---------E----LD---KGFVAEAEAAGLIYLKGHRS---VGGLRASIY-NAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred H---------H----HH---HHHHHHHHHcCCceeccccC---CCceeeeee-cCCCHHHHHHHHHHHHHHHH
Confidence 2 1 22 35667777788665443222 223999996 88899999999999887654
No 363
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=98.39 E-value=0.00061 Score=75.45 Aligned_cols=313 Identities=13% Similarity=0.077 Sum_probs=156.0
Q ss_pred HHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC--
Q psy1785 258 MEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL-- 334 (629)
Q Consensus 258 ~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl-- 334 (629)
.+.++.+.+++++.-.. ....|+.+||+|+..|++.||... | . ..+|...+.-|-...-+..+.+-
T Consensus 98 ~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~t-------g---r-~~ii~~~~~yHG~t~~~ls~~~~~~ 166 (451)
T PRK06918 98 PYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYT-------K---R-QGIISFSRGFHGRTLMTMTMTSKVK 166 (451)
T ss_pred HHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHh-------C---C-CcEEEECCCcCccchhhhhhcCCCc
Confidence 34556666777764222 368999999999999999998751 2 2 23455566666654444333221
Q ss_pred ------C--CCCEEEEecCC-----CCCCC-------HHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc----CHHHH
Q psy1785 335 ------G--SDNVYLIKTDA-----RGRML-------PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD----PIPAI 390 (629)
Q Consensus 335 ------g--~~~v~~V~~d~-----~g~~d-------~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id----pl~ei 390 (629)
+ ...+..+|... .+... .+.+++.+.... .+.....|+.---....|.+- -+++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~~l~~l 245 (451)
T PRK06918 167 PYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKKFVQEV 245 (451)
T ss_pred cccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHHHHHHH
Confidence 0 12345554321 11101 112333332111 122233333332222224332 28899
Q ss_pred HHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCC
Q psy1785 391 ADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASA 468 (629)
Q Consensus 391 ~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~ 468 (629)
+++|++||++++. .+.+......++ -...+++ . .|.++ .-|.++.-+..|.++.+++ +.... ..
T Consensus 246 ~~l~~~~gillI~DEV~tg~gr~g~~~------a~~~~~v-~-pDi~t--~sK~l~~G~pig~v~~~~~-i~~~~-~~-- 311 (451)
T PRK06918 246 RNICSEHGILFVADEIQTGFARTGKYF------AIEHFDV-V-PDLIT--VSKSLGAGVPISGVIGRKE-IMDES-AP-- 311 (451)
T ss_pred HHHHHHcCCEEEEeccccCcCccCcee------hhHhcCC-C-CCEEe--eehhhcCCCccEEEEEcHH-HHhcc-CC--
Confidence 9999999999988 444432211100 0111122 2 57554 5788876677888888653 33221 10
Q ss_pred CccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCC
Q psy1785 469 SYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPE 544 (629)
Q Consensus 469 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~ 544 (629)
.. . .. + .++.+......-.+++.+..+++.++ ..++.+++.++|++. +.+.-+. +.
T Consensus 312 -~~-~----------~~--T-~~g~~l~~aaa~a~l~~i~~~~~~~~---~~~~g~~l~~~l~~l~~~~~~~~~vr--g~ 371 (451)
T PRK06918 312 -GE-L----------GG--T-YAGSPLGCAAALAVLDIIEKENLNDR---AIELGKVVMNRFEEMKNKYNCIGDVR--GL 371 (451)
T ss_pred -CC-c----------Cc--C-CCcCHHHHHHHHHHHHHHHHCCHHHH---HHHHHHHHHHHHHHHHhhCCCceeec--cc
Confidence 00 0 00 1 12333333333334454434444444 444556666665543 2221122 22
Q ss_pred ceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 545 CTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 545 ~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
-..+.+.+..+...... . ......+.+.+.++|.++...... .+++|+++. ...|+++||..++.|++
T Consensus 372 G~~~~~~~~~~~~~~~~-~-------~~~~~~l~~~~~~~Gvlv~~~~~~---~~~lrl~p~-l~~t~~~id~~l~~l~~ 439 (451)
T PRK06918 372 GAMCAFELVQDRKTKEP-D-------KTLTANICKEANKRGLLLLSAGTY---GNVIRVLMP-LVITDEQLEEGLTIIEE 439 (451)
T ss_pred eeEEEEEEccCCCcCCC-c-------HHHHHHHHHHHHHCCeEEeecCCC---CCEEEEECC-CccCHHHHHHHHHHHHH
Confidence 22233323211100000 0 012346778888999765332111 258999984 56899999999999988
Q ss_pred Hhhc
Q psy1785 625 LGHD 628 (629)
Q Consensus 625 l~~~ 628 (629)
+.++
T Consensus 440 ~l~~ 443 (451)
T PRK06918 440 SLQA 443 (451)
T ss_pred HHHH
Confidence 7653
No 364
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.38 E-value=0.00017 Score=76.81 Aligned_cols=268 Identities=14% Similarity=0.053 Sum_probs=157.3
Q ss_pred HHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCC
Q psy1785 260 EHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDN 338 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~ 338 (629)
.++.+++++.+|++. .+.++++|++++.. .+.... .|..+ ++..-+......+++..|. +
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~-~l~~~~--------------~~g~v-~v~~P~y~~y~~~~~~~g~---~ 116 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIR-ALPALL--------------PRGRV-GIAPLAYSEYAPAFARHGH---R 116 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHH-HHHHhc--------------CCCeE-EEcCCCcHHHHHHHHHCCC---E
Confidence 566778999999985 68888888888754 332211 13333 3444445556678889998 8
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHH---HHHcCCeEEE--ecCccccccc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADI---CAEYDMADSV--TWNPHKLLTA 413 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i---~~~~~~~lhV--A~gg~~l~~~ 413 (629)
++.|+.++ +.+.+. ...|+.+..++-+|.+-+.+++.++ |++++.++.+ +|...... +
T Consensus 117 ~~~v~~~~------~~~~~~----------~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~ 179 (339)
T PRK06959 117 VVPLDEAA------DTLPAA----------LTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-A 179 (339)
T ss_pred EEeecccc------hhcccc----------CCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-c
Confidence 88887654 111111 1246667788999999777766665 5678899888 77654211 1
Q ss_pred ccccccccccccc-ccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCC
Q psy1785 414 PQQCSVFLTRRNY-VIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQC 491 (629)
Q Consensus 414 ~~~~~~~l~~~~~-~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 491 (629)
....+ ..+. =.+..++-|.++.| +=+|.++.. +++.......... +.
T Consensus 180 --------s~~~~~~~~~--vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~~-----------------~~--- 228 (339)
T PRK06959 180 --------SLAAHTDRPG--LVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGA-----------------WT--- 228 (339)
T ss_pred --------cchhccCCCC--EEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcCC-----------------CC---
Confidence 00010 0011 15778999999855 446777764 4444433211110 00
Q ss_pred CCCcchHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHH
Q psy1785 492 GRKPDVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELL 570 (629)
Q Consensus 492 sr~~~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l 570 (629)
...+...++..++.... .++..++..+..+++.+.|++. |+++.. . +++ +|...+.
T Consensus 229 ---vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~-~---~~f-~~~~~~~-------------- 285 (339)
T PRK06959 229 ---VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVHA-T---PLF-SWTDDPR-------------- 285 (339)
T ss_pred ---CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCccC-c---ceE-EEEeCCC--------------
Confidence 11233333344443333 3444566666788899999887 776532 1 222 2222110
Q ss_pred hhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 571 HKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 571 ~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..++.+.|.++|.+. .. . +..+++|+++. .+++++++++++|+++.+
T Consensus 286 ---~~~l~~~l~~~GI~v-r~--~-~~~~~lRisi~---~~~~e~~~l~~al~~~~~ 332 (339)
T PRK06959 286 ---AAALHAALARRGIWT-RY--F-APPPSVRFGLP---ADEAEWQRLEDALAECVP 332 (339)
T ss_pred ---HHHHHHHHHhCCeEE-EE--C-CCCCeEEEECC---CCHHHHHHHHHHHHHHHH
Confidence 135778888999654 32 2 22358999983 366799999999988754
No 365
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.38 E-value=0.00074 Score=74.91 Aligned_cols=325 Identities=11% Similarity=0.049 Sum_probs=165.8
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC---
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG--- 335 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg--- 335 (629)
+.++.+.+++++...-....|+.+||+|+..|++.||.... ..|.++. +.+|...+.-|-...-+..+.|-.
T Consensus 101 ~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~----~~g~tgr-~~ii~~~~~YHG~t~~als~s~~~~~~ 175 (460)
T PRK06916 101 SILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQ----NKGKPKK-QRFVTLKNAYHGDTIGAVSVGAIDLFH 175 (460)
T ss_pred HHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHH----hcCCCCC-cEEEEECCcCCcccHHhHhccCCcccc
Confidence 35556667777643224689999999999999999997421 1232222 334556666777554444433310
Q ss_pred ------CCCEEEEecCCCC----C--------CCHHHHHHHHHHHHhCCCCcEEEEEee-CCCccccccC----HHHHHH
Q psy1785 336 ------SDNVYLIKTDARG----R--------MLPESLRGEIQRTLAEGAVPFMVSATS-GTTVLGAFDP----IPAIAD 392 (629)
Q Consensus 336 ------~~~v~~V~~d~~g----~--------~d~~~Le~~i~~~~~~g~~~~~Vvat~-Gtt~~G~idp----l~ei~~ 392 (629)
...+..+|..... . -+++.|++.++. .+...-.|++-- -....|.+-| ++++++
T Consensus 176 ~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~ 252 (460)
T PRK06916 176 QVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRN 252 (460)
T ss_pred cccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHHH
Confidence 1134455432111 0 124455555542 222333444432 1222344422 789999
Q ss_pred HHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhhcCCCC
Q psy1785 393 ICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 393 i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
+|++||+.+++ ..-|.-.... +.-..+.|++ .|.+++ -|.++.-+ ..|+++.+++ +... +.. .
T Consensus 253 lc~~~g~llI~DEV~TG~GRtG~------~~a~~~~gv~--PDiv~~--gK~l~gG~~Pi~av~~~~e-i~~~-~~~--~ 318 (460)
T PRK06916 253 LCTKYNVLFITDEVATGFGRTGK------MFACEHENVT--PDIMTA--GKGLTGGYLPIAITVTTDE-IYNA-FYG--D 318 (460)
T ss_pred HHHHcCCEEEeechhhCCCcCch------hhHHHhcCCC--CCeeee--ehhhhcCccccceeeecHH-HHHH-hhc--c
Confidence 99999999988 3322211111 0011112342 688876 57776542 5788888764 3322 110 1
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEE
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNI 548 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v 548 (629)
+..... ....+ | ..+.+........+|+.+..++ +.++..++.++|++.|++.....++.+ .-.-..+
T Consensus 319 ~~~~~~-----~~~~~--T-~~gnpl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~ 387 (460)
T PRK06916 319 YEEQKT-----FFHGH--S-YTGNPLGCAVALANLELYEKTN---LIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMV 387 (460)
T ss_pred ccccCc-----cccCC--C-CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCcee
Confidence 100000 00001 1 1233434444445555554544 456677788888888876532222220 0011112
Q ss_pred EEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 549 SFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 549 ~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+.+..+..... ... ... .....+...+.++|.++ . +. + +.+|+... ..+|++|||.+++.+++..++
T Consensus 388 giel~~~~~~~~--~~~--~~~-~~~~~i~~~~~~~Gvl~-~--~~-g--~~l~~~Pp-l~it~~~id~~~~~l~~~l~~ 455 (460)
T PRK06916 388 GIELVKNKETKE--PFE--WTE-RVGVQVCKRSRELGMLT-R--PL-G--NTIVFMPP-LASTIDELDEMLRILYKAISD 455 (460)
T ss_pred eEEeeccccccc--CCC--chh-hHHHHHHHHHHHCCeEE-E--ec-C--CEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 232221110000 000 000 12246778889999654 2 11 2 57999984 889999999999999887654
No 366
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.38 E-value=0.00084 Score=74.43 Aligned_cols=320 Identities=13% Similarity=0.099 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHHHhCCCCC--CeEE-eCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC
Q psy1785 257 LMEEHVLAQMRTIVGFQGG--DGIF-CPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG 333 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~--~g~~-~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG 333 (629)
..+.++.+.+.+++..... ..+| +++||+|+..|++.||... | . ..++...+.-|-...-+..+.+
T Consensus 101 ~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~t-------g---r-~~Ii~~~~~yHG~t~~als~t~ 169 (459)
T PRK06931 101 PLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYT-------G---R-SNVISFSGGYHGMTHGALAVTG 169 (459)
T ss_pred HHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhc-------C---C-CeEEEECCCcCCccHHHHhhcC
Confidence 3345556667777643211 2334 4899999999999999751 2 2 2345556666765544443322
Q ss_pred C-------C--CCCEEEEecCCCCC--------CCHHHHHHHHHHHHhC---C-CCcEEEEEeeCCCccccccC----HH
Q psy1785 334 L-------G--SDNVYLIKTDARGR--------MLPESLRGEIQRTLAE---G-AVPFMVSATSGTTVLGAFDP----IP 388 (629)
Q Consensus 334 l-------g--~~~v~~V~~d~~g~--------~d~~~Le~~i~~~~~~---g-~~~~~Vvat~Gtt~~G~idp----l~ 388 (629)
- + ...+..+|.....+ -+.+.+++.+++..++ + ...-.|++--.....|.+-| ++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~ 249 (459)
T PRK06931 170 NLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQ 249 (459)
T ss_pred CcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHH
Confidence 1 0 12455565432211 1344454444443321 1 22333333222223344433 88
Q ss_pred HHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcC
Q psy1785 389 AIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSA 466 (629)
Q Consensus 389 ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~ 466 (629)
+++++|++||+.+++ ..-|.-.... +.-..+.|+ . .|.+++ -|.++.-+..|++..++. + ..+.
T Consensus 250 ~lr~lc~~~g~LlI~DEV~tGfGRtG~------~~a~~~~gv-~-PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~- 315 (459)
T PRK06931 250 KIREVTQKHGILLIVDEVQAGFARTGK------MFAFEHAGI-E-PDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ- 315 (459)
T ss_pred HHHHHHHHcCCEEEEecchhcCCcCch------HHHhhhcCC-C-CCEEEe--cccccCCcceeeeeeHHH--H-hhcc-
Confidence 999999999999988 3222211111 001112234 2 688888 577766566788777653 2 2221
Q ss_pred CCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEcc-CCC
Q psy1785 467 SASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLD-EPE 544 (629)
Q Consensus 467 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~-~p~ 544 (629)
+... .+ |. .+.+.........|+.+..+++ .++..++.++|++.|++.. ...++.+ .-.
T Consensus 316 -~~~~------------~~--T~-~gnpla~aaala~L~~l~~~~l---~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~ 376 (459)
T PRK06931 316 -PGGH------------TG--TF-RGNQLAMATGLTTLKILKEENL---AQNAAERGEWLKAQLAELQKRYPCIGNVRGR 376 (459)
T ss_pred -CCCC------------CC--CC-CCCHHHHHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHHhCCCeEeEecC
Confidence 1000 00 11 2334444444555665555543 4555566777777766531 1111210 011
Q ss_pred ceEEEEEeeCCC-CCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 545 CTNISFWYIPPS-LRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 545 ~~~v~F~~~p~~-~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
-..+.+.+..+. .+...+..... ..+...+...+.++|.++ .... ...+.+|+.+. ...|++|||.+++.++
T Consensus 377 Glm~giel~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~Gvl~-~~~~--~~~~~l~~~Pp-l~it~~eid~~~~~l~ 449 (459)
T PRK06931 377 GLMIGIEIVDERQPADAMGSYPAD---GELAAAIQKACFENGLLL-ERGG--RNGNVVRLLPP-LLITQAECEEFIDRFE 449 (459)
T ss_pred ceEEEEEEccCcccccccccCCcc---HHHHHHHHHHHHHCCcEE-eecC--CCCCEEEEECC-CCcCHHHHHHHHHHHH
Confidence 122334432211 00000000000 012346788889999654 2211 12368999995 8899999999999998
Q ss_pred HHhh
Q psy1785 624 RLGH 627 (629)
Q Consensus 624 ~l~~ 627 (629)
+...
T Consensus 450 ~~l~ 453 (459)
T PRK06931 450 QALL 453 (459)
T ss_pred HHHH
Confidence 8654
No 367
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.37 E-value=0.00073 Score=75.06 Aligned_cols=320 Identities=11% Similarity=0.048 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHhCCC-----CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC
Q psy1785 259 EEHVLAQMRTIVGFQ-----GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG 333 (629)
Q Consensus 259 E~~~~~~l~~l~G~~-----~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG 333 (629)
..++.+++.+++.-. -....|+++||+||..|++.||.... ..|.++ ...+|...+.-|-...-+..+.|
T Consensus 109 ~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~----~~g~~~-r~~ii~~~~syHG~t~gals~~~ 183 (472)
T PRK08742 109 AVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFH----NRGEHR-RTRFIALENGYHGETIGALAVGD 183 (472)
T ss_pred HHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHH----hcCCCC-CcEEEEECCCcCCCchhhhhccC
Confidence 345556666666321 13678999999999999999997532 123211 23355566666765444433322
Q ss_pred CC---------CCCEEEEecCCCCC----C--------CHHHHHHHHHHHHhCCCCcEEEEEee-CCCccccccC----H
Q psy1785 334 LG---------SDNVYLIKTDARGR----M--------LPESLRGEIQRTLAEGAVPFMVSATS-GTTVLGAFDP----I 387 (629)
Q Consensus 334 lg---------~~~v~~V~~d~~g~----~--------d~~~Le~~i~~~~~~g~~~~~Vvat~-Gtt~~G~idp----l 387 (629)
.. ..++..+|.....+ . +++.|++.++. .+...-.|+.-- -....|.+-| +
T Consensus 184 ~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl 260 (472)
T PRK08742 184 IPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYL 260 (472)
T ss_pred CcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHH
Confidence 11 11344555432111 1 24555555542 122333333332 1222344333 7
Q ss_pred HHHHHHHHHcCCeEEE-----ecCc-cccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchh
Q psy1785 388 PAIADICAEYDMADSV-----TWNP-HKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVL 460 (629)
Q Consensus 388 ~ei~~i~~~~~~~lhV-----A~gg-~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l 460 (629)
++++++|++||+.+++ .+|- +.++. ....|+ . .|.+++ -|.++.-+ ..|.++++++ +.
T Consensus 261 ~~lr~lc~~~gillI~DEV~TGfGRtG~~~a----------~e~~gv-~-PDiv~~--gKgl~gG~~Plaav~~~~e-i~ 325 (472)
T PRK08742 261 RRARELCDAHGAFLIADEIATGFGRTGTLFA----------CEQAGV-M-PDLLCL--SKGLTGGFLPLSAVLATQQ-LY 325 (472)
T ss_pred HHHHHHHHHcCCEEEEechhhCCCCCccchH----------HHhcCC-C-CCEEEE--cccccCCCCCcceeeccHH-HH
Confidence 8999999999999988 3432 12221 111234 2 799988 57776443 5677888764 33
Q ss_pred hhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 461 TECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 461 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
. .+.... . ... ..... | ..+.+........+|+.+-.+++ +++..++.++|++.++......++.
T Consensus 326 ~-~~~~~~---~-~~~----~~h~~--T-~~gnpl~~Aaa~a~L~~i~~~~l---~~~~~~~g~~l~~~~~~~~~~~~i~ 390 (472)
T PRK08742 326 D-AFLDDS---R-ERA----FLHSH--S-YTGNPLACAAALATLDIFADDDV---IARNQPTAARMTQLAAQIGEHPHVA 390 (472)
T ss_pred H-HhhccC---c-cCc----cCcCC--C-CCccHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHhcCCCee
Confidence 2 221100 0 000 00000 1 12334344444455666555554 4445556666665554432222222
Q ss_pred c-CCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHH
Q psy1785 541 D-EPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFI 619 (629)
Q Consensus 541 ~-~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~ 619 (629)
+ .-.-..+.+.+..+.........+ ..+...+.+++.++|.++ . + .+ +.+|+..- ...|++|||.++
T Consensus 391 dvRG~Gl~~giel~~~~~~~~~~~~~-----~~~~~~~~~~~~~~Gll~-~--~-~g--~vi~~~Pp-L~it~~ei~~~~ 458 (472)
T PRK08742 391 DVRQAGMVVAFELTRGGNKRTPFPPA-----ARVGLHAYRAALARGVVL-R--P-LG--DVLYWMPP-YCVDEAQLALLA 458 (472)
T ss_pred eEeccceEEEEEeccCccccccCCch-----hHHHHHHHHHHHHCCeEE-E--e-cC--CEEEEECC-CCCCHHHHHHHH
Confidence 0 011122333332211000000000 012245677888999654 2 1 13 58999985 789999999999
Q ss_pred HHHHHHhhc
Q psy1785 620 DEIERLGHD 628 (629)
Q Consensus 620 ~~i~~l~~~ 628 (629)
+.|++..++
T Consensus 459 ~~l~~~l~~ 467 (472)
T PRK08742 459 DTTRHAIDE 467 (472)
T ss_pred HHHHHHHHH
Confidence 999887553
No 368
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.32 E-value=0.00082 Score=73.72 Aligned_cols=312 Identities=9% Similarity=-0.018 Sum_probs=157.4
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-----
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL----- 334 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl----- 334 (629)
.++.+.+++++..+-....|+.+||+|+..|++.||.... ..|.++. .-++...+.-|-...-+..+.+-
T Consensus 86 ~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~----~~g~~~r-~~ii~~~~~yHG~t~~als~~~~~~~~~ 160 (422)
T PRK05630 86 IKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSK----GQGHPER-TRLLTWRSGYHGDTFAAMSVCDPEGGMH 160 (422)
T ss_pred HHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHH----hcCCCCC-cEEEEECCCcCCccHHHhccCCCccccc
Confidence 4455566666542224689999999999999999997521 1232222 23455666677654444333221
Q ss_pred ---C--CCCEEEEecCCCCCCCHHHHH---HHHHHHHhCCCCcEEEEEe---e--CCCccccccCHHHHHHHHHHcCCeE
Q psy1785 335 ---G--SDNVYLIKTDARGRMLPESLR---GEIQRTLAEGAVPFMVSAT---S--GTTVLGAFDPIPAIADICAEYDMAD 401 (629)
Q Consensus 335 ---g--~~~v~~V~~d~~g~~d~~~Le---~~i~~~~~~g~~~~~Vvat---~--Gtt~~G~idpl~ei~~i~~~~~~~l 401 (629)
+ ...+..+|.......+.++++ +.+++... + ....|++. . |+...-..+.+++++++|++||+.+
T Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~ll 238 (422)
T PRK05630 161 SLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLID-E-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILL 238 (422)
T ss_pred ccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHh-h-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEE
Confidence 0 113444544321111222332 22222222 1 22233322 1 1222233457899999999999999
Q ss_pred EE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 402 SV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 402 hV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
++ ..-|.-.... ++-....++ . .|.+++ -|.++.- +..|+++++++ ... .+... + ...
T Consensus 239 I~DEv~tG~GrtG~------~~a~~~~gv-~-PDi~t~--gK~l~gG~~p~~av~~~~~-i~~-~~~~~--~--~~~--- 299 (422)
T PRK05630 239 IADEIATGFGRTGE------LFATLAAGV-T-PDIMCV--GKALTGGFMSFAATLCTDK-VAQ-LISTP--N--GGG--- 299 (422)
T ss_pred EEecceeCCCcCch------hhHHHhcCC-C-CCeeee--echhhcCccccceeeccHH-HHH-HHhcc--C--CCC---
Confidence 88 4322211111 000111123 2 678866 6888543 24577777663 322 22110 0 000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc-CCCceEEEEEeeCCCC
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD-EPECTNISFWYIPPSL 557 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~-~p~~~~v~F~~~p~~~ 557 (629)
...... |. .+.+..+.....+++.+-.+.+ .++..++.++|++.|+++.....+.+ .-.-.++.+.+..+.
T Consensus 300 -~~~h~~--T~-~g~Pla~aaa~aaL~~l~~~~~---~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~- 371 (422)
T PRK05630 300 -ALMHGP--TF-MANPLACAVAHASLEIIETGMW---RKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV- 371 (422)
T ss_pred -ccccCC--CC-cCCHHHHHHHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc-
Confidence 000001 11 2333344455556666655544 45667778888887764321111110 011222333332110
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
. +..+.+.+.++|.++ .. .+ +++|+... ..+|++|||.+++.|++..+
T Consensus 372 -------~--------~~~~~~~~~~~Gl~~-~~---~g--~~l~~~Pp-L~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 372 -------D--------MEEATQAAVDHGVWL-RP---FG--RLVYVMPP-YITTSEQIAQICAALAAAVK 419 (422)
T ss_pred -------c--------HHHHHHHHHHCCeEE-Ee---cC--CEEEEECC-ccCCHHHHHHHHHHHHHHHh
Confidence 0 125677888999643 21 13 58999985 78999999999999988754
No 369
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.31 E-value=0.00085 Score=73.40 Aligned_cols=306 Identities=10% Similarity=0.064 Sum_probs=149.1
Q ss_pred HHHHHHHHHHHHHHHhCC--CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEc-CCcchHHHHHHHH
Q psy1785 255 FSLMEEHVLAQMRTIVGF--QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTS-EDAHYSIKKLAAF 331 (629)
Q Consensus 255 ~~~~E~~~~~~l~~l~G~--~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s-~~~H~Si~kaa~~ 331 (629)
...+-+.+.+++.+..|+ +..+.++|+|++++...++.+.... +- ..|...|++. .-+......++..
T Consensus 76 ~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~--------~~-~~~gd~v~i~~~P~y~~y~~~~~~ 146 (416)
T PRK09440 76 KDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGR--------RA-DGSLKKILFPLAPEYIGYADAGLE 146 (416)
T ss_pred CHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhcc--------cc-CCCCCeEEEecCCCchhhHHHhhc
Confidence 344555666667666564 4467888999888765554432211 00 0122234442 2222223333332
Q ss_pred cCC-CCCCEEEEecCCC---CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE-
Q psy1785 332 EGL-GSDNVYLIKTDAR---GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV- 403 (629)
Q Consensus 332 lGl-g~~~v~~V~~d~~---g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV- 403 (629)
.+. ....+..++++++ ..+|++.|+ +. ..+.+++.+...+.+|.+-+ +.+|.++|+++++++.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~------~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~D 218 (416)
T PRK09440 147 EDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID------EDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLID 218 (416)
T ss_pred cCceeecccccccccccccccCCCHHHcc--cC------CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEe
Confidence 221 0002233344333 478998886 21 13456667777899999866 66777889999999999
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
+|+-.. .... +..... .... -=.+..++.|.+..-+-+|.++. ++.+.+...... .+.
T Consensus 219 e~Y~~~~-~~~~-----~~~~~~-~~~~-~vI~~~SfSK~~~pGlRiG~~i~-~~~l~~~~~~~~-~~~----------- 277 (416)
T PRK09440 219 NAYGPPF-PGII-----FSEATP-LWNP-NIILCMSLSKLGLPGVRCGIVIA-DEEIIEALSNMN-GII----------- 277 (416)
T ss_pred CCccccC-CCcc-----hhhcCc-cccC-CeEEEecccccCCCcceEEEEeC-CHHHHHHHHHHH-HHh-----------
Confidence 775311 0000 000000 0011 12456789997443344776654 444443321110 000
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHH-----HHHHHHHHHHHHhcC-C--CcEEEccCCCceEEEEEeeC
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDK-----SFDNAKYFTDKIRHR-P--GFKLVLDEPECTNISFWYIP 554 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~-----~~~la~~l~~~L~~~-~--g~~l~~~~p~~~~v~F~~~p 554 (629)
+-....+...++.+++....+.+++++ ..+..+.+.+.|.+. + ++++. .|.-+.+.+--.|
T Consensus 278 ---------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~--~p~gg~fiw~~~~ 346 (416)
T PRK09440 278 ---------SLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIH--KPEGAIFLWLWFK 346 (416)
T ss_pred ---------ccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEe--cCCCceEEEEECC
Confidence 001122333444444433333332221 222334444555442 2 45543 3554443322122
Q ss_pred C-CCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeec-CC-------ccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 555 P-SLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPI-HA-------LPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 555 ~-~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~-~~-------~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
. ... ..++.+.+.++|..+...... .+ ..+++|++++ . ++++++..++.|+++
T Consensus 347 ~~~~~---------------~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~-~--~~~~l~~~i~~l~~~ 408 (416)
T PRK09440 347 DLPIT---------------TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV-Q--DDEEIEKGIAILAEE 408 (416)
T ss_pred CCCCC---------------HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec-C--CHHHHHHHHHHHHHH
Confidence 1 110 024556677788654432222 11 1248999996 2 589999999888876
Q ss_pred hh
Q psy1785 626 GH 627 (629)
Q Consensus 626 ~~ 627 (629)
.+
T Consensus 409 ~~ 410 (416)
T PRK09440 409 VE 410 (416)
T ss_pred HH
Confidence 54
No 370
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.31 E-value=0.00047 Score=76.07 Aligned_cols=312 Identities=14% Similarity=0.125 Sum_probs=155.2
Q ss_pred HHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCC-CCCCeEEEEcCCcchHHHHHHHHcCCCC--
Q psy1785 261 HVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLA-SCPRLVLYTSEDAHYSIKKLAAFEGLGS-- 336 (629)
Q Consensus 261 ~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~-~~p~~vv~~s~~~H~Si~kaa~~lGlg~-- 336 (629)
+..+.++++.+-+ .....|+.+||+||..|++.||..........|.+ ....-+|...+.-|-...-+..+.+-..
T Consensus 96 ~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~ 175 (443)
T PRK08297 96 RFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRK 175 (443)
T ss_pred HHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccc
Confidence 3444565655211 24689999999999999999987521100112320 0013356666667765544444433100
Q ss_pred ------CCEEEEecCC-C----C-C---------CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc----cCHHHHH
Q psy1785 337 ------DNVYLIKTDA-R----G-R---------MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF----DPIPAIA 391 (629)
Q Consensus 337 ------~~v~~V~~d~-~----g-~---------~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i----dpl~ei~ 391 (629)
.....+|... . + . -+++++++.|.. .+..+-.|++.--....|.+ +-+++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr 252 (443)
T PRK08297 176 TARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMR 252 (443)
T ss_pred cccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHH
Confidence 0000111100 0 0 0 022334444432 23345555554333333544 5689999
Q ss_pred HHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCC
Q psy1785 392 DICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASAS 469 (629)
Q Consensus 392 ~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~ 469 (629)
++|++||+.+.+ ...|.-.... +.-...+++ . .|.+++ -|.+ | .|.++++++ .. .... .
T Consensus 253 ~lc~~~g~llI~DEV~tGfGRtG~------~~a~~~~gv-~-PDiv~~--gK~l--~--~~a~l~~~~-i~-~~~~---~ 313 (443)
T PRK08297 253 ELCDEHDALLIFDEVQTGVGLTGT------AWAYQQLGV-R-PDIVAF--GKKT--Q--VCGIMAGRR-VD-EVED---N 313 (443)
T ss_pred HHHHHcCCEEEEechhhccCccch------HHHHHhcCC-C-CCEEEe--cccc--c--ccceecchH-HH-Hhhh---h
Confidence 999999999988 4433211111 000111133 3 788876 5766 3 344555543 11 1100 0
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC----CCcEEEccCCCc
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR----PGFKLVLDEPEC 545 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~----~g~~l~~~~p~~ 545 (629)
.+.... ...+ | -++.+........+++.+..++ .+++..++.++|.+.|++. |.+-.-. ...-
T Consensus 314 -~~~~~~-----~~~~--T-~~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~v-rg~G 380 (443)
T PRK08297 314 -VFAVSS-----RINS--T-WGGNLVDMVRARRILEVIEEDG---LVENAARQGEYLLARLEELAAEFPAVVSNV-RGRG 380 (443)
T ss_pred -hccCcc-----ccCC--C-CCccHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHCCCcceee-eccc
Confidence 000000 0001 1 1233333333444455554443 4555666777777777653 3221001 1223
Q ss_pred eEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 546 TNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 546 ~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..+.+.+... + ....+.+.+.++|.++.. .+ .+.+|+++. ..+|++|||.+++.|++.
T Consensus 381 ~~~~i~~~~~---------~-------~~~~~~~~l~~~Gvl~~~----~~-~~~lr~~P~-l~~t~~eid~~l~~l~~~ 438 (443)
T PRK08297 381 LMCAFDLPTT---------A-------DRDEVIRRLWEEGVLVLP----CG-ERSIRFRPA-LTVTTEEIDAAIDALRRA 438 (443)
T ss_pred eEEEEEecCH---------H-------HHHHHHHHHHHCCEEEec----CC-CCeEEEECC-ccCCHHHHHHHHHHHHHH
Confidence 3344444210 0 124677888889965421 12 257999985 889999999999999887
Q ss_pred hhcC
Q psy1785 626 GHDL 629 (629)
Q Consensus 626 ~~~l 629 (629)
.+++
T Consensus 439 l~~~ 442 (443)
T PRK08297 439 LPEV 442 (443)
T ss_pred HHhh
Confidence 6653
No 371
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.30 E-value=0.00011 Score=80.92 Aligned_cols=298 Identities=13% Similarity=0.086 Sum_probs=145.7
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEE-cCCcchH--HHHHHHH--cC
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYT-SEDAHYS--IKKLAAF--EG 333 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~-s~~~H~S--i~kaa~~--lG 333 (629)
+.++.+.+.+++.. .....|+.+||+|+..|++.||... | .++ ++.. ...-|.. +...... .|
T Consensus 90 ~~~la~~l~~~~p~-~~~v~f~~sGseA~e~AlklAr~~t-------g---r~~-i~~~~~~~~h~~~~~~~g~~~~~~~ 157 (431)
T PRK06209 90 ELDAAESFLELIDG-ADMVKFCKNGSDATSAAVRLARAYT-------G---RDL-VARCADHPFFSTDDWFIGTTPMSAG 157 (431)
T ss_pred HHHHHHHHHHhCCc-cceEEEecCHHHHHHHHHHHHHHHh-------C---CCe-EEEeccCccccccccccccCCCCCC
Confidence 34556667776632 1468899999999999999999751 2 122 2222 1111210 0000000 01
Q ss_pred CCC---CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCcc
Q psy1785 334 LGS---DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPH 408 (629)
Q Consensus 334 lg~---~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~ 408 (629)
+.. ..+..++ .-|+++|++.+++. ......|+.--.....+..+.+++++++|++||+.+.+ +.-|.
T Consensus 158 ~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~ 229 (431)
T PRK06209 158 IPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMITGF 229 (431)
T ss_pred CChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccccC
Confidence 100 0111122 23788999888641 11232333322222233444599999999999999988 54443
Q ss_pred ccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhh-hc-C--CCCccccCCcCCCcccCC
Q psy1785 409 KLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTEC-HS-A--SASYLFQKDKFYDTKYDS 484 (629)
Q Consensus 409 ~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~-~~-~--~~~yl~~~~~~~~~~~~~ 484 (629)
.+... .+ . ..+++ . .|.+++ -|.++.-+..|.++.+++ ..... +. . ...++..
T Consensus 230 ~~~~~--g~----~-~~~gv-~-PDi~t~--gK~lggG~p~~av~~~~~-i~~~~~~~~~~~~~~~~~~----------- 286 (431)
T PRK06209 230 RWHMR--GA----Q-KLYGI-V-PDLSCF--GKALGNGFAVSALAGKRE-YMELGGLEHTDRERVFLLS----------- 286 (431)
T ss_pred CcCcc--hh----h-HHhCC-C-cceeee--hhhhcCCcccEEEEEHHH-HHhhhcccccCCCCceeec-----------
Confidence 22110 00 0 01133 2 577665 688876455777777653 33210 00 0 0001100
Q ss_pred CCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC---CCcEE-EccCCCceEEEEEeeCCCCCCC
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR---PGFKL-VLDEPECTNISFWYIPPSLRGK 560 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~---~g~~l-~~~~p~~~~v~F~~~p~~~~~~ 560 (629)
+-..+.+..+.....+++.+-.++ ..++..++.++|++.|++. -++.. +........+.+....+ .+.
T Consensus 287 ---~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~--~~~ 358 (431)
T PRK06209 287 ---TTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDG--NGQ 358 (431)
T ss_pred ---cCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCc--ccC
Confidence 001122334455556666665555 3455555666776666542 13221 10001111111211110 011
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
. . . .+...+.+.|.++|.++ + .+ +++ ..+|++|||++++.+++...+
T Consensus 359 ~-~----~---~~~~~~~~~l~~~Gi~~---------p-~l--~is-~~ht~~dId~~l~~l~~~l~~ 405 (431)
T PRK06209 359 P-S----Q---AFRTLFLQETIRRGVLM---------P-SL--VVS-YAHGDADIERTIDAVHGALGV 405 (431)
T ss_pred C-c----H---HHHHHHHHHHHHCCccc---------c-cc--ccc-ccCCHHHHHHHHHHHHHHHHH
Confidence 0 0 1 12235677888999643 1 12 443 678999999999999876543
No 372
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.28 E-value=0.00028 Score=76.32 Aligned_cols=321 Identities=13% Similarity=0.131 Sum_probs=164.7
Q ss_pred HHHHHHHHHHhCCC-CCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCC---
Q psy1785 260 EHVLAQMRTIVGFQ-GGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLG--- 335 (629)
Q Consensus 260 ~~~~~~l~~l~G~~-~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg--- 335 (629)
.+..++++++..-. -....|+++||+|+.+|++.|++.. +..|-+. .+.+|--...-|-+..-++.+-|+.
T Consensus 90 ~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~----~~~G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~ 164 (449)
T COG0161 90 IELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYW----RARGQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALR 164 (449)
T ss_pred HHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHH----HhcCCCc-ceEEEEeccCcCcccchheeccCchhhh
Confidence 34445566666522 2578999999999999999999863 3345322 1223334444565554444444421
Q ss_pred -------CCCEEEEecCC------CCCCCHH--HHHHHHHHHH-hCC-CCcE-EEEEeeCCCccccccC----HHHHHHH
Q psy1785 336 -------SDNVYLIKTDA------RGRMLPE--SLRGEIQRTL-AEG-AVPF-MVSATSGTTVLGAFDP----IPAIADI 393 (629)
Q Consensus 336 -------~~~v~~V~~d~------~g~~d~~--~Le~~i~~~~-~~g-~~~~-~Vvat~Gtt~~G~idp----l~ei~~i 393 (629)
...+..+|... .+.-+.+ .+.+.+++.. +.| .... +|+=-......|.+-| +++++++
T Consensus 165 ~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~i 244 (449)
T COG0161 165 HAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREI 244 (449)
T ss_pred hhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHH
Confidence 11334444322 1233332 2333333332 234 2222 2222222333444544 7899999
Q ss_pred HHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCC-CCccEEEEEeccchhhhhhcCC-CC
Q psy1785 394 CAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTA-PQQCSVFLTRHQSVLTECHSAS-AS 469 (629)
Q Consensus 394 ~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~-P~~~g~ll~r~~~~l~~~~~~~-~~ 469 (629)
|++||+.++. ..-|+--....+.|. +.|+. -|.+++. |.|.. -...|.+++.++ ..+ ++... ..
T Consensus 245 C~ky~ILlI~DEV~tGFGRTG~~FA~e------~~gi~--PDi~~~a--KGLT~GY~Pl~a~l~~~~-I~~-~~~~~~~~ 312 (449)
T COG0161 245 CDKYGILLIADEVATGFGRTGKMFACE------HAGIV--PDILCLA--KGLTGGYLPLSAVLTSDR-IYE-AFSDGDAG 312 (449)
T ss_pred HHHcCcEEEeecceeCCCcCchhhhhh------hcCCC--CCeeeec--ccccccchhhHhHhhhHH-HHH-HHhcccCC
Confidence 9999999988 223322222222222 11222 4666654 55532 223566777664 333 22211 11
Q ss_pred ccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc-CCCcEEEccCCCce-E
Q psy1785 470 YLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH-RPGFKLVLDEPECT-N 547 (629)
Q Consensus 470 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~-~~g~~l~~~~p~~~-~ 547 (629)
-+.+. +| -.+.+..+......|+.+-++++.++ ..++..+|.+.|++ .++...+.+-...+ +
T Consensus 313 ~f~HG------------~T-YsghPlacAaAla~L~i~e~e~l~~~---~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli 376 (449)
T COG0161 313 AFMHG------------HT-YSGNPLACAAALANLDILEEEDLLER---VAEIGAYLQAGLQAALADHPLVGDVRGLGLI 376 (449)
T ss_pred eeccC------------Cc-cccCHHHHHHHHHHHHHHHhcCHHHH---HHHHHHHHHHHHHHhcccCCcEEEeeccceE
Confidence 11110 11 02233344455556677767766554 44788999999987 44333444112222 2
Q ss_pred EEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 548 ISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 548 v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
..+.+.++.... ..+ -.++..++.+...++|.+. .+. | +.+=++.- .-.|++|||++++.+++..+
T Consensus 377 ~~iElv~d~~t~----~~f---~~~~~~~~~~~~~e~Gl~i---Rp~-g--~~i~~~PP-liit~~eid~l~~~l~~al~ 442 (449)
T COG0161 377 GAIELVADKATK----TPF---EARVGARVRAAALERGLLI---RPL-G--DVIYLMPP-LIITREEIDELVDALREALD 442 (449)
T ss_pred EEEEEecccccc----cch---hhhHHHHHHHHHHHCCeEE---eec-C--CEEEEcCC-ccCCHHHHHHHHHHHHHHHH
Confidence 344544332111 011 1234467888999999643 333 3 34555552 45799999999999987654
No 373
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.28 E-value=0.00048 Score=75.78 Aligned_cols=303 Identities=14% Similarity=0.107 Sum_probs=148.9
Q ss_pred HHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCC-CCeEEEEcCCcchHHHHHHHHcCCC-CCC
Q psy1785 262 VLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASC-PRLVLYTSEDAHYSIKKLAAFEGLG-SDN 338 (629)
Q Consensus 262 ~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~-p~~vv~~s~~~H~Si~kaa~~lGlg-~~~ 338 (629)
..++++++.+.+. ....|+.+||+|+..|++.||.......+..|.+.. .+.++...+.-|-...-+....|-. ...
T Consensus 90 l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~ 169 (431)
T TIGR03251 90 FVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKT 169 (431)
T ss_pred HHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccc
Confidence 3444555542221 467899999999999999999642110111232110 1335666666776654444443310 000
Q ss_pred -------EEEEec-------CCCCC--------CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc----cCHHHHHH
Q psy1785 339 -------VYLIKT-------DARGR--------MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF----DPIPAIAD 392 (629)
Q Consensus 339 -------v~~V~~-------d~~g~--------~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i----dpl~ei~~ 392 (629)
...++. +.... -+++++++.++. .+..+-.|++.--....|.+ +.+++|++
T Consensus 170 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~ 246 (431)
T TIGR03251 170 ARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRA 246 (431)
T ss_pred cCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHH
Confidence 000111 10000 012233333331 23345555555433334544 56899999
Q ss_pred HHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEecc--chhhhhhcCCC
Q psy1785 393 ICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQ--SVLTECHSASA 468 (629)
Q Consensus 393 i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~--~~l~~~~~~~~ 468 (629)
+|++||+.+.+ ...|.-.... +.-...+++ . .|.+++. |.+ | .+.++.+++ ......+. ..
T Consensus 247 lc~~~g~llI~DEV~tG~GrtG~------~~a~~~~gv-~-PDi~~~g--K~~--~--~~g~~~~~~i~~~~~~~~~-~~ 311 (431)
T TIGR03251 247 LCDEHDALLIFDEVQTGVGLTGT------AWAYQQLGV-Q-PDIVAFG--KKT--Q--VCGIMAGRRVDEVADNVFA-VP 311 (431)
T ss_pred HHHHcCCEEEEecchhccCccch------HHHHHhcCC-C-CCEEEec--ccC--c--cceEEecchHHHhhhhccc-Cc
Confidence 99999999988 4333221111 000111233 3 7888864 443 3 234445442 11110000 00
Q ss_pred CccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc----CCCcEEEcc-CC
Q psy1785 469 SYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH----RPGFKLVLD-EP 543 (629)
Q Consensus 469 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~----~~g~~l~~~-~p 543 (629)
... . .| -++.+........+++.+..+++. ++..++.++|.+.|++ .+++ +.+ ..
T Consensus 312 ~~~------------~--~T-~~gnpl~~aaa~a~L~~l~~~~l~---~~~~~~g~~l~~~L~~l~~~~~~~--i~~vrg 371 (431)
T TIGR03251 312 SRL------------N--ST-WGGNLVDMVRATRILEIIEEERLV---DNARVQGAHLLARLHELAAEFPHL--VSNPRG 371 (431)
T ss_pred ccc------------C--CC-CCCCHHHHHHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHHHHhCccc--eecccc
Confidence 000 0 11 123333444455566666555543 3444555666655544 3222 221 12
Q ss_pred CceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHH
Q psy1785 544 ECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIE 623 (629)
Q Consensus 544 ~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~ 623 (629)
.-..+.+.+.+. + ....+.+.|.++|.++ .. .+ .+.+|+++. ..+|++|||++++.|+
T Consensus 372 ~G~~~~i~~~~~---------~-------~~~~~~~~l~~~Gvl~-~~---~g-~~~lr~~P~-l~~t~~eid~~l~~l~ 429 (431)
T TIGR03251 372 RGLMCAFDLPST---------A-------DRDEVIRQLYREGVLL-LG---CG-ERSIRFRPP-LTVTREEIDAAIDAIR 429 (431)
T ss_pred cceeEEEEeCCH---------H-------HHHHHHHHHHhCCeEE-ec---CC-CCeEEEECC-ccCCHHHHHHHHHHHH
Confidence 223344444210 0 1235778888999654 21 12 247999995 8999999999999987
Q ss_pred H
Q psy1785 624 R 624 (629)
Q Consensus 624 ~ 624 (629)
+
T Consensus 430 ~ 430 (431)
T TIGR03251 430 R 430 (431)
T ss_pred h
Confidence 6
No 374
>KOG0634|consensus
Probab=98.28 E-value=0.0011 Score=69.97 Aligned_cols=326 Identities=16% Similarity=0.144 Sum_probs=175.8
Q ss_pred cccChhHHHHHHHHHHHHHHHhCCCC---CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHH
Q psy1785 249 YEVSPVFSLMEEHVLAQMRTIVGFQG---GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSI 325 (629)
Q Consensus 249 ~~~~p~~~~~E~~~~~~l~~l~G~~~---~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si 325 (629)
|..+.+...+-..+.+.....+..+. .+..+|.|.|.+...++.+...+ ...|++-+.+..+.
T Consensus 96 Yg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~--------------gd~vlie~~ty~~A 161 (472)
T KOG0634|consen 96 YGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINR--------------GDHVLIEEYTYPSA 161 (472)
T ss_pred cccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcC--------------CCceEEecccchHH
Confidence 44444444333433333332333332 47899999999999888877664 33577788887788
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhC--C-CCcEEEEEee--CCCccccccCH---HHHHHHHHHc
Q psy1785 326 KKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAE--G-AVPFMVSATS--GTTVLGAFDPI---PAIADICAEY 397 (629)
Q Consensus 326 ~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~--g-~~~~~Vvat~--Gtt~~G~idpl---~ei~~i~~~~ 397 (629)
....+.+|+ +++.|+.|.+| |+++.|++.+..-.-. + ..| +|.-|. |.+.+|.--.+ ++|.++|++|
T Consensus 162 L~s~~a~gv---~~ipv~md~~G-i~pE~l~~il~~w~~~~~k~~~p-~vlYTIPTgqNPTG~tls~errk~iy~LArKy 236 (472)
T KOG0634|consen 162 LQSMEALGV---KIIPVKMDQDG-IDPESLEEILSNWKPGSYKKPKP-HVLYTIPTGQNPTGNTLSLERRKKIYQLARKY 236 (472)
T ss_pred HHhccccCc---eEEeccccCCC-CCHHHHHHHHhcCCcccccCCCC-eEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 888888887 88888886665 8999999998753221 1 223 555554 66777776554 4788899999
Q ss_pred CCeEEE--ecC--------cccccccc-cccccccc--cccc-ccCCcceEEE-eCCCCCCCCCCccEEEEEeccchhhh
Q psy1785 398 DMADSV--TWN--------PHKLLTAP-QQCSVFLT--RRNY-VIEVVADSVT-WNPHKLLTAPQQCSVFLTRHQSVLTE 462 (629)
Q Consensus 398 ~~~lhV--A~g--------g~~l~~~~-~~~~~~l~--~~~~-~i~~gaDsv~-~~~HK~l~~P~~~g~ll~r~~~~l~~ 462 (629)
++.+.- .|. +..-+-.| ...+.|++ ...+ +++-....+. -++.|.++.-.=.|.+- .++..+++
T Consensus 237 DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it-~~~~~l~r 315 (472)
T KOG0634|consen 237 DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWIT-GNSLFLKR 315 (472)
T ss_pred CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEee-cCHHHHHH
Confidence 987655 332 22211111 11113332 1111 1111011121 23456664323344433 33334443
Q ss_pred hhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHH----HHHHHHHHHhc-CCC--
Q psy1785 463 CHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFD----NAKYFTDKIRH-RPG-- 535 (629)
Q Consensus 463 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~----la~~l~~~L~~-~~g-- 535 (629)
.++ ..+.+.+....+...-++.+++..|.+|+.+++.+... .+..+...|.+ .|.
T Consensus 316 il~------------------~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~ 377 (472)
T KOG0634|consen 316 ILD------------------LAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSV 377 (472)
T ss_pred Hhh------------------hcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 221 11112222223355677888999999999988877554 34444444444 333
Q ss_pred cEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeec------CCccceEEEeecCCC
Q psy1785 536 FKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPI------HALPNFFRLVLQNSA 609 (629)
Q Consensus 536 ~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~------~~~~~~lR~~~~n~~ 609 (629)
+++. +|.-+.+ +|+.-+ .. +.+-...++++-..+...+.+.|..++.++.. .+..-|||+++. .
T Consensus 378 ~~~~--~P~aGmF-iwv~i~-~~----~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a--~ 447 (472)
T KOG0634|consen 378 CEYH--PPKAGMF-IWVEIP-YI----NFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA--F 447 (472)
T ss_pred eEEe--cCCcceE-EEEEec-cc----ccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee--c
Confidence 3433 4655554 333211 00 00111224444456777888999876553322 112239999995 4
Q ss_pred CCHHHHHHHHHHH
Q psy1785 610 LDHSDMDYFIDEI 622 (629)
Q Consensus 610 ~t~edid~l~~~i 622 (629)
...++++.-++.+
T Consensus 448 a~~e~l~~g~~rf 460 (472)
T KOG0634|consen 448 AEPEKLDEGIERF 460 (472)
T ss_pred CCHHHHHHHHHHH
Confidence 4555555444433
No 375
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.26 E-value=0.0009 Score=73.97 Aligned_cols=307 Identities=12% Similarity=0.067 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCC-----------------CCCCC-eEEEEc
Q psy1785 257 LMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGL-----------------ASCPR-LVLYTS 318 (629)
Q Consensus 257 ~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~-----------------~~~p~-~vv~~s 318 (629)
.+.+.+.+.+++++.-+-....|+++||+||..|++.||..... +.++. ++.++ .+|...
T Consensus 105 ~la~~l~~~l~~~~p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~--~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~ 182 (464)
T TIGR00699 105 DWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRS--KQRGYQADFSEEENESCMDNQAPGSPDLSILSFK 182 (464)
T ss_pred HHHHHHHHhHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHh--cCCCcccccccccccccccccccCCcCCEEEEEC
Confidence 34444443344454311246899999999999999999864210 00010 01122 466667
Q ss_pred CCcchHHHHHHHHcCCC--------CCCEEEEecCC-CCC-------------CCHHHHHHHHHHHHhCCCCcEEEEEee
Q psy1785 319 EDAHYSIKKLAAFEGLG--------SDNVYLIKTDA-RGR-------------MLPESLRGEIQRTLAEGAVPFMVSATS 376 (629)
Q Consensus 319 ~~~H~Si~kaa~~lGlg--------~~~v~~V~~d~-~g~-------------~d~~~Le~~i~~~~~~g~~~~~Vvat~ 376 (629)
+.-|-...-+..+.+-. ...+..+|... ... -+++.|++.+++ .+...-.|++--
T Consensus 183 ~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EP 259 (464)
T TIGR00699 183 GAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEP 259 (464)
T ss_pred CCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeC
Confidence 77787766555544321 01223333321 000 124455555542 222344555554
Q ss_pred CCCccccccC----HHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccC-CcceEEEeCCCCCCCCCCcc
Q psy1785 377 GTTVLGAFDP----IPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIE-VVADSVTWNPHKLLTAPQQC 449 (629)
Q Consensus 377 Gtt~~G~idp----l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~-~gaDsv~~~~HK~l~~P~~~ 449 (629)
.....|.+-| +++++++|++||+.+++ ..-|.-.... +.-...+|+. . .|.+++ -|.++. .
T Consensus 260 v~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~------~fa~e~~gv~~~-PDi~t~--gK~lg~---g 327 (464)
T TIGR00699 260 IQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGK------FWAHEHWNLDDP-PDMVTF--SKKFQT---A 327 (464)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcc------hhHHHhcCCCCC-CCEEEe--hhhhcc---C
Confidence 4455577777 99999999999999988 3332211111 0011122454 4 888777 577742 2
Q ss_pred EEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHH
Q psy1785 450 SVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDK 529 (629)
Q Consensus 450 g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~ 529 (629)
|++..++ .+.. ..+.+.. . | -.+.+..+...-.+|+.+-.+++ .++..++.++|++.
T Consensus 328 G~~~~~~--~~~~---~~~~~~~------------~--T-~~gnp~~~aaa~a~L~~l~~~~l---~~~~~~~g~~l~~~ 384 (464)
T TIGR00699 328 GYFFHDP--AFRP---NKPYRQF------------N--T-WMGDPSRALILREIIQEIKRKDL---LENVAHVGDYLYTG 384 (464)
T ss_pred Cccccch--hccC---CCCcccc------------c--C-CCCCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHH
Confidence 3332221 1100 0000000 0 0 12223233334445565545543 44555566777777
Q ss_pred HhcCC-CcE-EEcc-C--CCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEe
Q psy1785 530 IRHRP-GFK-LVLD-E--PECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLV 604 (629)
Q Consensus 530 L~~~~-g~~-l~~~-~--p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~ 604 (629)
|++.. .+. ++.+ . ..-..+.+.+. . . ..+..+.+.+.++|.+. .. .+ .+.||+.
T Consensus 385 L~~l~~~~~~~i~~vRg~G~Glm~gie~~-~--------~-------~~~~~i~~~~~~~Gvl~-~~---~g-~~~ir~~ 443 (464)
T TIGR00699 385 LEDLQKKYPEFIQNLRGKGRGTFIAWDTP-D--------E-------AKRDKLLKKARNNGVNI-GG---CG-VKAIRLR 443 (464)
T ss_pred HHHHHHhCCCceeeecccCeEEEEEEecC-C--------H-------HHHHHHHHHHHHCCcEE-ec---CC-CCeEEEe
Confidence 76531 121 1220 1 23334444431 0 0 11246788888999654 22 13 2689999
Q ss_pred ecCCCCCHHHHHHHHHHHHHH
Q psy1785 605 LQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 605 ~~n~~~t~edid~l~~~i~~l 625 (629)
.. ..+|++|||.+++.|++.
T Consensus 444 Pp-l~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 444 PM-LVFQKHHADIFLEIISKI 463 (464)
T ss_pred CC-CCCCHHHHHHHHHHHHHh
Confidence 95 889999999999999875
No 376
>KOG1358|consensus
Probab=98.22 E-value=0.00028 Score=73.47 Aligned_cols=304 Identities=12% Similarity=0.122 Sum_probs=176.5
Q ss_pred HHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec
Q psy1785 265 QMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT 344 (629)
Q Consensus 265 ~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~ 344 (629)
.+++++|.++ .++++-|-.+...++.+ .-++ ..+++..+..++.+.++..+.-- .+++.+
T Consensus 147 ~iakF~G~E~--aivYs~gF~ti~S~ipa--------fsKr------GDIi~~de~~nfaIq~GlqlSRS---~i~~Fk- 206 (467)
T KOG1358|consen 147 RIAKFMGTED--AIVYSYGFSTIESAIPA--------FSKR------GDIIFVDEAVNFAIQKGLQLSRS---TISYFK- 206 (467)
T ss_pred HHHHhhCCcc--eeeeccccchhhhcchh--------hhcc------CcEEEEehhhhHHHHHHHhhhhh---eeEEec-
Confidence 4889999875 34444433332222222 2222 34788899999999988765432 556655
Q ss_pred CCCCCCCHHHHHHHHHHHH----hCCCC---cEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ecCccccccc-c
Q psy1785 345 DARGRMLPESLRGEIQRTL----AEGAV---PFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TWNPHKLLTA-P 414 (629)
Q Consensus 345 d~~g~~d~~~Le~~i~~~~----~~g~~---~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~-~ 414 (629)
..|.++|+..+.+.. ++..+ --++++-.---.+|-+-|+++|.++..+|...+.+ .|.-+.+-.- .
T Consensus 207 ----hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~Gr 282 (467)
T KOG1358|consen 207 ----HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGR 282 (467)
T ss_pred ----CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCc
Confidence 457778877664322 22221 23566666677889999999999999999999888 5655443210 0
Q ss_pred ccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCC
Q psy1785 415 QQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRK 494 (629)
Q Consensus 415 ~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 494 (629)
.-| ++-..++.. +|.++++.--.++. .|.+.+.+........-....|.+...- -+
T Consensus 283 Gvt----eH~~v~~~~-iDiv~~sm~~alas---~GgFc~G~~~i~~hQrLSg~~Y~fSAsl----------------Pp 338 (467)
T KOG1358|consen 283 GVT----EHFGVPITD-IDIVTASMETALAS---GGGFCAGKSFIADHQRLSGSGYCFSASL----------------PP 338 (467)
T ss_pred ccc----ccCCCCccc-eeeeeecccccccc---cCceeecceeeEeeeeccccceeeeccC----------------ch
Confidence 001 111113455 99999998755543 4556555432221111112233332110 01
Q ss_pred cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHH
Q psy1785 495 PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVA 574 (629)
Q Consensus 495 ~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~ 574 (629)
..+-++..++.....+. .+++.....+..+.+.+....++++.. .|.++++-..+.++.-.. +-..+ +-
T Consensus 339 ~la~aa~~ai~i~~~~p--~~~~~L~~k~~~~H~~l~~~s~~~v~~-~~~SPi~hl~l~~~~~s~-----e~e~~---lL 407 (467)
T KOG1358|consen 339 YLAGAAIKAILIEEWNP--EIVQPLRAKVAKFHAALSSNSGFIVSG-SPESPIIHLQLERSYGSR-----EKEEK---LL 407 (467)
T ss_pred hhhhhHHHHHHHHhhCc--chhhhhhccccccchhhhcCCceEEec-CcCCceeeeeecccccch-----HHHHH---HH
Confidence 12222233333332222 255566667777888888888899888 788888877776543111 11111 22
Q ss_pred HHHHHHHHhcCcEEEeeeecCC-----ccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 575 PKIKERMMKSGSMMITYQPIHA-----LPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 575 ~~i~~~l~~~G~~~i~~~~~~~-----~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
.+|.++...+|.+......+.+ .+--||+|+ |...++++++++.+.|++.+..
T Consensus 408 ~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~-~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 408 EEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV-SAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred HHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE-eCCCCHHHHHHHHHHHHHHHHh
Confidence 4667777666655433222211 122599999 4999999999999999988754
No 377
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.20 E-value=0.004 Score=67.89 Aligned_cols=289 Identities=8% Similarity=0.006 Sum_probs=147.4
Q ss_pred CCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCC-CC-------CCEEEE
Q psy1785 271 GFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGL-GS-------DNVYLI 342 (629)
Q Consensus 271 G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGl-g~-------~~v~~V 342 (629)
+.+..+.++|+|++++... +.. ... |...|++..-++..+...++..|+ |. ..++.|
T Consensus 92 ~~~~d~I~it~Ga~~al~~-l~~-l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v 156 (402)
T TIGR03542 92 RIDPEEIFISDGAKCDVFR-LQS-LFG-------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYL 156 (402)
T ss_pred CCCHHHEEECCCcHHHHHH-HHH-hcC-------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEe
Confidence 5666788999999887654 322 111 223355555556667777888776 21 166777
Q ss_pred ecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHcCCeEEE--ecCccccccccccc
Q psy1785 343 KTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEYDMADSV--TWNPHKLLTAPQQC 417 (629)
Q Consensus 343 ~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~ 417 (629)
|.++++.++++. ++. ..+-+|+.+...+.+|.+-+ +.+|.++|+++++++.+ +|.....-.. ..-
T Consensus 157 ~~~~~~~~~~~~-~~~--------~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~-~~~ 226 (402)
T TIGR03542 157 PCTKENNFIPDL-PEE--------PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS-LPH 226 (402)
T ss_pred ecchhhCCCCCc-ccc--------CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC-CCc
Confidence 876543333321 110 12345666688899999877 77888889999999988 6654321100 000
Q ss_pred cccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhh-cCCCCccccCCcCCCcccCCCCccCCCCCCc
Q psy1785 418 SVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECH-SASASYLFQKDKFYDTKYDSGDKHIQCGRKP 495 (629)
Q Consensus 418 ~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 495 (629)
+ +..... ... --.++.++-|.++.| +-+|.+++.. .+..... .....+...... +..+ .
T Consensus 227 ~-~~~~~~--~~~-~vi~~~SfSK~~g~pGlRiG~~i~~~-~l~~~~~~~~~~~~~~~~~~-----------~~~~---~ 287 (402)
T TIGR03542 227 S-IFEIPG--AKE-CAIEFRSFSKTAGFTGVRLGWTVVPK-ELTYADGHSVIQDWERRQCT-----------KFNG---A 287 (402)
T ss_pred c-hhhCCC--Ccc-cEEEEecCccccCCCCcceEEEEecH-HHhhcchhhHHHHHHHHhhh-----------cccC---C
Confidence 0 000000 001 124467889999754 5578777644 3321000 000000000000 0000 1
Q ss_pred chHHHHHHHHhcCh---hhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCce-EEEEEeeCCCCCCCCchhhHHHHHh
Q psy1785 496 DVLKFWFMWKAKGT---DGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECT-NISFWYIPPSLRGKEDQADFNELLH 571 (629)
Q Consensus 496 ~al~~w~~l~~~G~---~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~-~v~F~~~p~~~~~~~~~~~~~~~l~ 571 (629)
..+...++...+.. .-+++..+...+..+++.+.|++. ++++. .|..+ -+.+++ |.... .
T Consensus 288 s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~--~~~~~~f~~v~l-~~~~~----~-------- 351 (402)
T TIGR03542 288 SYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVY--GGEHAPYLWVKT-PEGIS----S-------- 351 (402)
T ss_pred CHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-Cceec--CCCceeEEEEEC-CCCCC----H--------
Confidence 11221222222222 223444555566777888888886 77754 34333 333333 21111 0
Q ss_pred hHHHHHHHHHH-hcCcEEEeeeecCC-ccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 572 KVAPKIKERMM-KSGSMMITYQPIHA-LPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 572 ~~~~~i~~~l~-~~G~~~i~~~~~~~-~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
.++.+.+. +.|..+........ ..+++|+++. . ++++++..++.|+++
T Consensus 352 ---~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-~--~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 352 ---WDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAF-G--KRENIVEACERIKEA 401 (402)
T ss_pred ---HHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-C--CHHHHHHHHHHHHhh
Confidence 24566666 45765443332221 1369999974 2 678888777776653
No 378
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=98.19 E-value=0.0016 Score=72.93 Aligned_cols=176 Identities=13% Similarity=0.023 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHhCC--CC-C--CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH
Q psy1785 256 SLMEEHVLAQMRTIVGF--QG-G--DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA 330 (629)
Q Consensus 256 ~~~E~~~~~~l~~l~G~--~~-~--~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~ 330 (629)
...|..+..++.+-.+. .. . +.++|+|++++...++.+.....+ . .|...|++..-+.......+.
T Consensus 132 ~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~l---l------~pGD~Vlv~~P~y~~y~~~~~ 202 (521)
T TIGR03801 132 PHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANEL---L------KKGDKIALMTPIFTPYLEIPE 202 (521)
T ss_pred HHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhc---C------CCCCEEEEeCCCcHHHHHHHH
Confidence 34444444566665432 22 3 688999999988776654222111 0 244456666666666667777
Q ss_pred HcCCCCCCEEEEecCCC-------CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHHc--C
Q psy1785 331 FEGLGSDNVYLIKTDAR-------GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAEY--D 398 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~-------g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~~--~ 398 (629)
..|.|. +++.|++++. ..+|+++|++++.. .+.+|+.+..++.+|.+-+ +.+|+++|+++ +
T Consensus 203 l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~------~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~ 275 (521)
T TIGR03801 203 LPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDP------SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPD 275 (521)
T ss_pred HhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCC------CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCC
Confidence 775432 6777777532 57899998876532 3446666778899999876 67778889987 7
Q ss_pred CeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEecc
Q psy1785 399 MADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQ 457 (629)
Q Consensus 399 ~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~ 457 (629)
+++.. +|+-... . . .+. +.. ... --.++.+..|.+++| .-.|.++..+.
T Consensus 276 l~II~DEvY~~f~~--~-~-~sl-~~~----~~~-~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 276 LMILTDDVYGTFVD--D-F-RSL-FAE----LPY-NTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred eEEEECCCchhhcc--c-c-cch-hhh----CCC-CEEEEEcchhhccCchhhhhhhhcCch
Confidence 88887 7764321 1 0 010 000 111 236677899998755 44777776543
No 379
>KOG0053|consensus
Probab=98.17 E-value=0.0001 Score=78.19 Aligned_cols=217 Identities=16% Similarity=0.165 Sum_probs=136.4
Q ss_pred ChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEc----CCcchHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTS----EDAHYSIKK 327 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s----~~~H~Si~k 327 (629)
.|....+|. .++.+-|.. .....++|..|...++..-+. .| .. +++. +.++.-+.+
T Consensus 76 nPt~~~le~----~iaal~ga~--~~l~fsSGmaA~~~al~~L~~--------~g----~~--iV~~~~~Y~gT~~~l~~ 135 (409)
T KOG0053|consen 76 NPTRDVLES----GIAALEGAA--HALLFSSGMAAITVALLHLLP--------AG----DH--IVATGDVYGGTLRILRK 135 (409)
T ss_pred CCchHHHHH----HHHHHhCCc--eEEEecccHHHHHHHHHHhcC--------CC----Cc--EEEeCCCcccHHHHHHH
Confidence 344444444 367776654 356666665555544443221 12 22 3333 233444666
Q ss_pred HHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE--ec
Q psy1785 328 LAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV--TW 405 (629)
Q Consensus 328 aa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV--A~ 405 (629)
.....|+ ....|.++ |++++++++.+ +..+|-.-..++.++.+-||++|+++|+++|+.+.| .|
T Consensus 136 ~~~~~gi---e~~~vd~~-----~~~~~~~~i~~------~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf 201 (409)
T KOG0053|consen 136 FLPKFGG---EGDFVDVD-----DLKKILKAIKE------NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTF 201 (409)
T ss_pred HHHHhCc---eeeeechh-----hHHHHHHhhcc------CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCc
Confidence 6777787 44444322 23344444433 467888899999999999999999999999999999 88
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCc--cEEEEEeccchhhhhhcCCCCccccCCcCCCcccC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ--CSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYD 483 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~--~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~ 483 (629)
++.....+ +..|||+++-+.-|++++.-. .|++..+..++.++..... .+
T Consensus 202 ~~p~~~~p--------------L~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~------------- 253 (409)
T KOG0053|consen 202 GSPYNQDP--------------LPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-ED------------- 253 (409)
T ss_pred CcccccCh--------------hhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HH-------------
Confidence 88743322 456899999999999988654 5666665444444322111 11
Q ss_pred CCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEE
Q psy1785 484 SGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLV 539 (629)
Q Consensus 484 ~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~ 539 (629)
++--.+++-+|..+| |-.-+.-++++..++|..+++.|.+.|.++-+
T Consensus 254 -------lg~~~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~kv 300 (409)
T KOG0053|consen 254 -------LGWCEDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKKV 300 (409)
T ss_pred -------hcCCCCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeEE
Confidence 122235677777665 44445557888888888888888888887733
No 380
>PLN02397 aspartate transaminase
Probab=98.15 E-value=0.0055 Score=67.33 Aligned_cols=256 Identities=13% Similarity=0.101 Sum_probs=147.1
Q ss_pred CCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec-C-CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---
Q psy1785 311 PRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT-D-ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD--- 385 (629)
Q Consensus 311 p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~-d-~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id--- 385 (629)
|...|++..-++......++..|. +++.+|. + ++..+|++.+++.+... .....+++.....+-+|.+-
T Consensus 141 pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPTG~v~s~e 214 (423)
T PLN02397 141 PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPTGVDPTPE 214 (423)
T ss_pred CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHH
Confidence 444677777777778888999998 9999987 3 34689999998887542 12356777777888888884
Q ss_pred CHHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcc-eEEEeCCCCCCCCC-CccEEEE--Eeccch
Q psy1785 386 PIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVA-DSVTWNPHKLLTAP-QQCSVFL--TRHQSV 459 (629)
Q Consensus 386 pl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~ga-Dsv~~~~HK~l~~P-~~~g~ll--~r~~~~ 459 (629)
.+++|.++|+++++|+.+ +|.....-............. ..+- =.++.++-|.++.| .=+|.++ ..+.+.
T Consensus 215 ~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~----~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~ 290 (423)
T PLN02397 215 QWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFV----EDGHEILVAQSYAKNMGLYGERVGALSVVCKSADV 290 (423)
T ss_pred HHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHH----hcCCcEEEEEECcccCCCccccceEEEEEeCCHHH
Confidence 466778889999999998 776654210000000000000 0111 14566889999854 4477775 333332
Q ss_pred hhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChh--------hHHHHHHHHHHHHHHHHHHHh
Q psy1785 460 LTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTD--------GLEAHIDKSFDNAKYFTDKIR 531 (629)
Q Consensus 460 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~--------G~~~~~~~~~~la~~l~~~L~ 531 (629)
+....+.-..+... ...+. ..+..+++...+... -+++..++..+..+.+.+.|+
T Consensus 291 ~~~~~~~~~~~~~~--------------~~~~~---~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~ 353 (423)
T PLN02397 291 AVRVKSQLKLIARP--------------MYSNP---PIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLYDALE 353 (423)
T ss_pred HHHHHHHHHHHHhc--------------ccCCC---cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111000000000 00011 122223333323221 145556677778888999998
Q ss_pred cCCC----cEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhc-CcEEEeeeecCCccceEEEeec
Q psy1785 532 HRPG----FKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKS-GSMMITYQPIHALPNFFRLVLQ 606 (629)
Q Consensus 532 ~~~g----~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~-G~~~i~~~~~~~~~~~lR~~~~ 606 (629)
++ + ++++ .|+-+.++|- + +. .++.++|.++ |. ++. .+ + |++++
T Consensus 354 ~~-~~~~~~~~~--~p~gg~fl~~--~--l~----------------~~~~~~Ll~~~~V-~v~----~~--~--Ri~~~ 401 (423)
T PLN02397 354 AR-GSPGDWSHI--TKQIGMFSFT--G--LN----------------KEQVDRMTKEYHI-YMT----RD--G--RISMA 401 (423)
T ss_pred hc-CCCCCCCcc--cCCceEEEec--C--CC----------------HHHHHHHHHhCCE-EEC----CC--C--eEEEe
Confidence 87 5 6543 3665554442 1 10 1244556544 54 332 11 2 99985
Q ss_pred CCCCCHHHHHHHHHHHHHHhh
Q psy1785 607 NSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 607 n~~~t~edid~l~~~i~~l~~ 627 (629)
..++++++++++.|+++.+
T Consensus 402 --~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 402 --GLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred --eCCHHHHHHHHHHHHHHHh
Confidence 4889999999999998754
No 381
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.13 E-value=7.5e-05 Score=76.76 Aligned_cols=241 Identities=19% Similarity=0.323 Sum_probs=138.9
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccc---cccCHHHHHHHHHHcCCeEEE-----ecCcccccccccccc
Q psy1785 347 RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLG---AFDPIPAIADICAEYDMADSV-----TWNPHKLLTAPQQCS 418 (629)
Q Consensus 347 ~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G---~idpl~ei~~i~~~~~~~lhV-----A~gg~~l~~~~~~~~ 418 (629)
.|.+|++.|++.|++.-. .++|+.+.....++..| +++.+++++++|++|++.+.+ |-+.++..-..-
T Consensus 166 KGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~--- 241 (471)
T COG3033 166 KGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREP--- 241 (471)
T ss_pred CCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCc---
Confidence 478999999999988644 34787776666666666 568899999999999999988 345544322100
Q ss_pred cccccccc--------ccCCcceEEEeCCCCCCCCCCccEEEEEeccchh---hhhhcCCCCccccCCcCCCcccCCCCc
Q psy1785 419 VFLTRRNY--------VIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVL---TECHSASASYLFQKDKFYDTKYDSGDK 487 (629)
Q Consensus 419 ~~l~~~~~--------~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l---~~~~~~~~~yl~~~~~~~~~~~~~~~~ 487 (629)
.+++. -+.. ||-++.++-|=..++.| |++.+|++..+ ..+.... +-. .+...+|.
T Consensus 242 ---gYrd~sI~~IarEm~sY-aD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDvy~~~~~~~---V~~-----eG~~tYGg- 307 (471)
T COG3033 242 ---GYRDWSIEEIAREMYSY-ADGCTMSAKKDGLVNMG-GFLCFKDDSFFDVYEECRTLV---VVQ-----EGFPTYGG- 307 (471)
T ss_pred ---ccccccHHHHHHHHHhh-hhhheeeccccceeccc-cEEEecCccHHHHHHHHHhhe---Eee-----ccccccCc-
Confidence 12221 2445 99999999999999985 78888887532 2221111 100 11111221
Q ss_pred cCCCCCCcchHHHHHHHHhcChhhH-HHHHHHHHHHHHHHHHHHhcCCCcEEEccCCCceEEEEE----eeCCCCCCCCc
Q psy1785 488 HIQCGRKPDVLKFWFMWKAKGTDGL-EAHIDKSFDNAKYFTDKIRHRPGFKLVLDEPECTNISFW----YIPPSLRGKED 562 (629)
Q Consensus 488 ~~~~sr~~~al~~w~~l~~~G~~G~-~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p~~~~v~F~----~~p~~~~~~~~ 562 (629)
-.||...++++ .|+ ++. ...+++-++-.+||.+.|.+. |+.++. |.-+--+|- +.|.-.+
T Consensus 308 --l~GrdmealAv--GL~----e~~~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~--paGGHavfvda~~~lphip~---- 372 (471)
T COG3033 308 --LAGRDMEALAV--GLR----EGVNFDYLAHRVAQVQYLADGLEEA-GVPIVQ--PAGGHAVFVDAGKFLPHIPA---- 372 (471)
T ss_pred --ccchhHHHHHH--HHH----HhcCcHHHHHHHHHHHHHHHHHHhc-CCeeEe--cCCCceEEeehhhhcCCCCh----
Confidence 23444433322 111 221 234566666789999999997 998775 333333332 2221111
Q ss_pred hhhHHHHHhhHHHHHHHHH-HhcC-------cEEEeeeecCC-----ccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 563 QADFNELLHKVAPKIKERM-MKSG-------SMMITYQPIHA-----LPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 563 ~~~~~~~l~~~~~~i~~~l-~~~G-------~~~i~~~~~~~-----~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
+.+.. ..+.-.| .+.| .+..+..+-.+ ....+|+++--..-|.+++|+++++++++.+
T Consensus 373 -eqFpa------qala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e 443 (471)
T COG3033 373 -EQFPA------QALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKE 443 (471)
T ss_pred -hhCcH------HHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHh
Confidence 11111 1222222 2233 22222111111 1257999995344599999999999998764
No 382
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.12 E-value=1.4e-05 Score=87.43 Aligned_cols=243 Identities=10% Similarity=0.033 Sum_probs=128.5
Q ss_pred cccCCCCCCChhHHHHHHHHHhhcccccCCcccccccccccccCCCCHHHHHHhhc--c----CCCCCCCCHHHHHHHHH
Q psy1785 133 ELGFNAGPSSHGKLIDLMKTVIQYSVKTGHPYFVNQLFSSKVNEWVNPEELEKKLE--L----GFNAGPSSHAKLIDLMK 206 (629)
Q Consensus 133 ~~~lp~~~~~~~~ll~~~~~~l~y~v~t~hP~F~~~l~s~~v~~~~~~~~l~~~~~--~----~lp~~~~~~~~il~~l~ 206 (629)
..++|++|.+.+++++.+...+ |..++.||+|++++.+.+... + .+.+...++ . ..|.....++++++|+.
T Consensus 14 ~~~~p~~~~~~~~~~~~~~~~i-yld~~a~~~~~~~~tt~~~p~-~-~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la 90 (431)
T TIGR01788 14 KYRMPEEEMPPDAAYQLIHDEL-SLDGNPRLNLATFVTTWMEPE-A-RKLMDETINKNMIDKDEYPQTAEIENRCVNMLA 90 (431)
T ss_pred cccCCCCCCCHHHHHHHHHHHh-hhcCCcceeeeeeeCCCCCHH-H-HHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence 4689999999999999998654 457888999999987643211 1 233333332 1 22222245677778888
Q ss_pred HHhcccccCCCCccccccCCCCChHHHHHHHHHHhc--C---CCc-cccccChhHHHHHHHHHHHHHHHhCCCCCCeEEe
Q psy1785 207 TVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADAL--N---PSV-YTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFC 280 (629)
Q Consensus 207 ~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~--n---~~~-~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~ 280 (629)
++++.+.. +....+.+.++.+..++++-..+... . ..+ .....-=.+...|...+.+.++++|+.- ...
T Consensus 91 ~llg~~~~--~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v---~~i 165 (431)
T TIGR01788 91 DLWHAPAK--DAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVEL---REV 165 (431)
T ss_pred HHhCCCCC--CCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCcee---EEE
Confidence 88754310 01345566788877666653222110 0 000 0000011233455666667777777631 121
Q ss_pred C---CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCC-HHHHH
Q psy1785 281 P---GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRML-PESLR 356 (629)
Q Consensus 281 ~---GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d-~~~Le 356 (629)
+ ++-......+..+... .+.+|+++.+++ +.|.+| ++++.
T Consensus 166 ~~d~~~~~vd~~~L~~~i~~------------~t~lV~~t~g~t------------------------~tG~idpi~~I~ 209 (431)
T TIGR01788 166 PMDPGRYVIDPEQVVEAVDE------------NTIGVVCILGTT------------------------YTGEYEDVKALN 209 (431)
T ss_pred ecCCCceeeCHHHHHHHHhh------------CCeEEEEEeCCC------------------------CCcccCCHHHHH
Confidence 1 1101112222222211 245556555554 556655 33333
Q ss_pred HHHHHHHhC-C-CCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccccc
Q psy1785 357 GEIQRTLAE-G-AVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 357 ~~i~~~~~~-g-~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~ 422 (629)
+.+++.... | ..|+||++++|....-... .++..-.+ ..-.+++++++|+|...|++|+.++-
T Consensus 210 ~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~--~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~ 274 (431)
T TIGR01788 210 DALDEYNAKTGWDIPIHVDAASGGFIAPFVY--PDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIW 274 (431)
T ss_pred HHHHHHHhhhCCCceEEEecccHHHHHHHhC--CCchhhcC-CCCceEEEECchhccCCCCCcEEEEE
Confidence 333321100 1 5899999999865421100 11111111 23356679999999878999998753
No 383
>KOG1404|consensus
Probab=98.05 E-value=0.00068 Score=70.71 Aligned_cols=287 Identities=15% Similarity=0.107 Sum_probs=153.2
Q ss_pred CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCE---------EEEec-
Q psy1785 275 GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNV---------YLIKT- 344 (629)
Q Consensus 275 ~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v---------~~V~~- 344 (629)
....|+++||+||-+|++.||... | ...+|.-...-|-+..-++.+-+++..+- ...+.
T Consensus 110 ~~vfF~nsGsEANelal~mar~Yt-------~----~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~P 178 (442)
T KOG1404|consen 110 KVVFFVNSGSEANELALKMARLYT-------G----NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNP 178 (442)
T ss_pred eEEEEecCCchHHHHHHHHHHHhc-------C----CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCC
Confidence 458999999999999999999752 1 12345555566666555555555432211 11110
Q ss_pred CC-CC----C---CCH----HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCeEEE-----
Q psy1785 345 DA-RG----R---MLP----ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMADSV----- 403 (629)
Q Consensus 345 d~-~g----~---~d~----~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~lhV----- 403 (629)
|. .| . --. ++|++.|.....+. ....++-.-..+.|.+.+ +++..++|+++|..++.
T Consensus 179 dp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~--vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqt 256 (442)
T KOG1404|consen 179 DPYRGIFGGSNEEEASDRYAKELEDLILYDGPET--VAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQT 256 (442)
T ss_pred CcccccCCCCchhhhHHHHHHHHHHHHHhcCCCc--eeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhh
Confidence 00 01 0 012 23333443332222 222222222233377776 77899999999998887
Q ss_pred ec--CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCcc
Q psy1785 404 TW--NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTK 481 (629)
Q Consensus 404 A~--gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~ 481 (629)
++ -|+.|-++ .+. + . -|+++. -|.+|.-...|.+++.++ ....+ ..+-.|.+.
T Consensus 257 GfGRtG~~wgfe--------~h~---v-~-PDIvTm--AKgiGnG~Pl~AVvtt~E-Ia~v~-~~~~~~fnT-------- 311 (442)
T KOG1404|consen 257 GFGRTGHMWGFE--------SHG---V-V-PDIVTM--AKGIGNGFPLGAVVTTPE-IADVL-NQKSSHFNT-------- 311 (442)
T ss_pred cccccccccccc--------ccC---C-C-ccHHHH--HhhccCCCcceeeecCHH-HHHHH-Hhccccccc--------
Confidence 22 23444333 111 1 1 344433 477777777888888764 33322 222112211
Q ss_pred cCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEEccCCC-ce-EEEEEeeCCCCC
Q psy1785 482 YDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLVLDEPE-CT-NISFWYIPPSLR 558 (629)
Q Consensus 482 ~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~~~~p~-~~-~v~F~~~p~~~~ 558 (629)
-.+.+..+..-.+.++.+-++ ++.+++.+...||.++|.+.. +.+++. +.+ .+ .+-..+..+...
T Consensus 312 --------yggnP~a~avg~aVL~Vikee---~LqE~aa~vG~yl~~~l~~l~d~h~iIG-dVRG~GLm~GvE~V~dk~~ 379 (442)
T KOG1404|consen 312 --------YGGNPVACAVGLAVLKVIKEE---NLQENAAEVGSYLLEKLAALKDKHPIIG-DVRGRGLMLGVELVSDKSE 379 (442)
T ss_pred --------cCCCchhHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHhhcCCcee-ecccceeEEEEEEecccCC
Confidence 133343333333445555444 556778889999999998853 456665 322 11 111222111100
Q ss_pred CCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHH
Q psy1785 559 GKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEI 622 (629)
Q Consensus 559 ~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i 622 (629)
. ..+++ .+...+-+.+.+.|.+ ++-..+.| ++||+..- ...|++|||.+++..
T Consensus 380 ~--~pp~~-----~~~~~i~~~cke~Gvl-vg~g~i~G--~vfriaPP-lciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 380 P--KPPAT-----AEGAVIGEQCKELGVL-VGKGGIHG--NVFRIAPP-LCITKEDIDFAVEYF 432 (442)
T ss_pred C--CCcch-----HHHHHHHHHHHHhCee-eecccccc--eEEEecCC-eeccHHHHHHHHHHH
Confidence 0 01111 1223577888899964 45445555 58999984 778999998888754
No 384
>KOG0257|consensus
Probab=98.03 E-value=0.0017 Score=68.52 Aligned_cols=242 Identities=9% Similarity=0.022 Sum_probs=148.1
Q ss_pred ChhHHHHHHHHHHHHHHHhCC---CCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH
Q psy1785 252 SPVFSLMEEHVLAQMRTIVGF---QGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL 328 (629)
Q Consensus 252 ~p~~~~~E~~~~~~l~~l~G~---~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka 328 (629)
.-+..++-+.+.+.++++.|- +..+..+|.|+.++...++..-.. +..-|+.-+-...+....
T Consensus 68 ~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~--------------~GDeVii~eP~fd~Y~~~ 133 (420)
T KOG0257|consen 68 GYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLN--------------PGDEVIVFEPFFDCYIPQ 133 (420)
T ss_pred cCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHcC--------------CCCEEEEecCcchhhhhH
Confidence 333444445556666775554 346789999999998877765443 344455556666677777
Q ss_pred HHHcCCCCCCEEEEecC--------CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCcccccc---CHHHHHHHHHHc
Q psy1785 329 AAFEGLGSDNVYLIKTD--------ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFD---PIPAIADICAEY 397 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d--------~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~id---pl~ei~~i~~~~ 397 (629)
..+.|- ..+.|+.. +++.+|++.||.++.+ ++.+|+.....+-+|.+- .|.+|+++|++|
T Consensus 134 ~~maG~---tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~------kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~ 204 (420)
T KOG0257|consen 134 VVMAGG---TPVFVPLKPKEGNVSSSDWTLDPEELESKITE------KTKAIILNTPHNPTGKVFSREELERIAELCKKH 204 (420)
T ss_pred HhhcCC---cceeeccccccccccCccccCChHHHHhhccC------CccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence 788885 55666554 5679999999999976 477899999999999885 488999999999
Q ss_pred CCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhhhcCCCCccccC
Q psy1785 398 DMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTECHSASASYLFQK 474 (629)
Q Consensus 398 ~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~ 474 (629)
|+++.. +|..+.+-....-+.+.| . |+.. --.=+.++-|.+++. .=.|..+. ++.+...+....-
T Consensus 205 ~~lvisDevYe~~v~d~~~h~r~asl--P--gm~e-rtitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~------ 272 (420)
T KOG0257|consen 205 GLLVISDEVYEWLVYDGNKHIRIASL--P--GMYE-RTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQ------ 272 (420)
T ss_pred CEEEEEhhHhHHHhhCCCcceeeecC--C--chhh-eEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhh------
Confidence 988877 554433221100111111 1 3333 344566777887652 11445544 4333332211110
Q ss_pred CcCCCcccCCCCccCCCCCCc---chHHHHHHHHhcChh--hHHH-HHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 475 DKFYDTKYDSGDKHIQCGRKP---DVLKFWFMWKAKGTD--GLEA-HIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 475 ~~~~~~~~~~~~~~~~~sr~~---~al~~w~~l~~~G~~--G~~~-~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
+..+.|+..+ .+.++...+.+...+ .+.+ +.+...+..+.|.+.|.+. |+++..
T Consensus 273 -----------~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~ 332 (420)
T KOG0257|consen 273 -----------NFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTG 332 (420)
T ss_pred -----------ccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCcccc
Confidence 0122344343 233333333322222 3344 7888888999999999998 999875
No 385
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.03 E-value=0.0062 Score=68.27 Aligned_cols=156 Identities=12% Similarity=0.052 Sum_probs=96.1
Q ss_pred CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCC--CCCCCHH
Q psy1785 276 DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDA--RGRMLPE 353 (629)
Q Consensus 276 ~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~--~g~~d~~ 353 (629)
+.++|+|++++...++.+...+.+ . .|...|++..-+.......+.+.|.|. .++.++.++ +..+|++
T Consensus 163 ~I~vT~Ga~~al~~~~~aL~~~~l---l------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~ 232 (527)
T PRK09275 163 DLFAVEGGTAAMCYIFDSLKENGL---L------KAGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDS 232 (527)
T ss_pred eEEEeCCHHHHHHHHHHHHhhhhc---C------CCCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHH
Confidence 788999999988777664322111 0 244456666666566667778887622 445555543 3689999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeeCCCccccccC---HHHHHHHHHH--cCCeEEE--ecCcccccccccccccccccccc
Q psy1785 354 SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP---IPAIADICAE--YDMADSV--TWNPHKLLTAPQQCSVFLTRRNY 426 (629)
Q Consensus 354 ~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp---l~ei~~i~~~--~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~ 426 (629)
+|++++.. .+.+|+.+..++.+|.+-+ +.+|+++|++ +++|+.. +|+-... .. .+ ++..
T Consensus 233 ~l~~~~~~------~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~--~s-~~~~--- 298 (527)
T PRK09275 233 ELEKLRDP------SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--DF--RS-LFAV--- 298 (527)
T ss_pred HHHhhcCC------CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--cc--cC-HHHh---
Confidence 99886542 3456777788999999876 7777888865 4888888 6764321 10 00 0000
Q ss_pred ccCCcceEEEeCCCCCCCCCC-ccEEEEEecc
Q psy1785 427 VIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQ 457 (629)
Q Consensus 427 ~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~ 457 (629)
... --.++.++.|.++.|- =.|.+...++
T Consensus 299 -~~~-~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 299 -LPY-NTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred -CCC-CEEEEeehhhhccCcHhHHhhhhcCch
Confidence 111 2356778899987653 3676665543
No 386
>KOG1402|consensus
Probab=97.78 E-value=0.012 Score=60.40 Aligned_cols=294 Identities=16% Similarity=0.199 Sum_probs=158.2
Q ss_pred HHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHH-------HHHcCCC
Q psy1785 263 LAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKL-------AAFEGLG 335 (629)
Q Consensus 263 ~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~ka-------a~~lGlg 335 (629)
-+.+.+++|++. ..-+..|.+++..|+..||.+. .+.++++.....++.+.+..|-...-+ -.+.++|
T Consensus 107 ~~~vt~lf~~~k--vlpmnTGaEa~Eta~KLaR~wg---y~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fg 181 (427)
T KOG1402|consen 107 AEYVTKLFGYDK--VLPMNTGAEAVETACKLARKWG---YRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFG 181 (427)
T ss_pred HHHHHHhcCcce--eeecccchhHHHHHHHHHHHHH---HhhccCCccceeEEEecccccCceeeeEEecCCcchhhccC
Confidence 345788898864 3335667899999999999653 234444322233344444444211100 1222322
Q ss_pred C---CCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC--HHHHHHHHHHcCCeEEE-------
Q psy1785 336 S---DNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP--IPAIADICAEYDMADSV------- 403 (629)
Q Consensus 336 ~---~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp--l~ei~~i~~~~~~~lhV------- 403 (629)
. ..+..||. -|.++|+.++++ ..-.-|+|--..|..-.-.-+| |++.+++|.+|+..+++
T Consensus 182 p~~P~~~~~v~Y-----~d~eale~~l~~---~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl 253 (427)
T KOG1402|consen 182 PFLPGVVDKVPY-----GDAEALEVALKS---PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGL 253 (427)
T ss_pred CCCCCcceeecc-----CCHHHHHHHhcC---CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcc
Confidence 1 13566664 367888888876 1113345544555443333333 88999999999999988
Q ss_pred ecCccccccccccccccccccccccCCcceEEEeCCCCCC-CCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLL-TAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l-~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
+-.|-.|.+ ++.. + + -|.+.+. |.+ |+-+..+.+++.++ .... + -
T Consensus 254 ~RTGk~la~---------d~en--v-~-PDivilg--KalSGG~~Pvsavl~~~~-im~~-~------~----------- 299 (427)
T KOG1402|consen 254 ARTGKLLAC---------DYEN--V-R-PDIVILG--KALSGGVYPVSAVLADDD-IMLN-I------K----------- 299 (427)
T ss_pred cccCcEEEe---------ehhh--c-C-CCeEEEe--ccccCCeeeeEEEEecHH-HHhc-c------C-----------
Confidence 222222222 2322 1 2 5666654 433 33455667776553 2211 1 1
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCC-c----EEEccCCCceEEEEEeeCCCC
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPG-F----KLVLDEPECTNISFWYIPPSL 557 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g-~----~l~~~~p~~~~v~F~~~p~~~ 557 (629)
.+.++ .+-....|....++.++..---+++++++..|...|+++|.+++. | +.+...--++-+.|. |...
T Consensus 300 -pgeHg--sTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~--~~~~ 374 (427)
T KOG1402|consen 300 -PGEHG--STYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVIN--PSKT 374 (427)
T ss_pred -CCccc--cccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEec--cccc
Confidence 11110 000112344444444443334467889999999999999998743 2 112101223334443 3221
Q ss_pred CCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 558 RGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 558 ~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
.+. ++ -.++-+|.++|.+ . -+.++ +.||+..- ...+++|++.-+++|+...
T Consensus 375 ~~~---~a---------w~~cl~lk~~g~L--A-kptH~--~IiRfaPP-L~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 375 SGQ---DA---------WDVCLALKENGLL--A-KPTHG--NIIRFAPP-LVISEEDLREGIEAIEKTI 425 (427)
T ss_pred cch---hH---------HHHHHcccccccc--c-CCCCC--CeEEecCC-cccCHHHHHHHHHHHHHHh
Confidence 111 11 1345567778853 2 23334 58999984 6789999999999998754
No 387
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=97.52 E-value=0.0039 Score=66.11 Aligned_cols=165 Identities=14% Similarity=0.208 Sum_probs=98.0
Q ss_pred HHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec
Q psy1785 266 MRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT 344 (629)
Q Consensus 266 l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~ 344 (629)
.+.+.|+.. ..+.++...+.+.+.++.+.... ++.. ..... ... -.|+++...++..|. ..+.+
T Consensus 74 ~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~-----~EvV---is~g~-lV~-gg~~~v~d~~~~aG~-----~l~Ev 138 (395)
T COG1921 74 AELLCGLTGAEAAAIVNNNAAAVLLTLNALAEG-----KEVV---VSRGE-LVE-GGAFRVPDIIRLAGA-----KLVEV 138 (395)
T ss_pred HHHHhcccchhheeeECCcHHHHHHHHhhhccC-----CeEE---EEccc-ccc-CCCCChhHHHHHcCC-----EEEEe
Confidence 333445543 45667776666655544432221 0000 01111 122 578999999999886 44555
Q ss_pred CCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCC--ccccccCHHHHHHHHHHcCCeEEE-ecCccccccccccccccc
Q psy1785 345 DARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTT--VLGAFDPIPAIADICAEYDMADSV-TWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 345 d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt--~~G~idpl~ei~~i~~~~~~~lhV-A~gg~~l~~~~~~~~~~l 421 (629)
...++....+++.+|.+- ..++.-+...+ +++. -+++++.+++|++|+.+.| +-+|. +.-+..
T Consensus 139 G~tn~t~~~d~~~AIne~------ta~llkV~s~~~~f~~~-l~~~~l~~ia~~~~lpvivD~aSg~-~v~~e~------ 204 (395)
T COG1921 139 GTTNRTHLKDYELAINEN------TALLLKVHSSNYGFTGM-LSEEELVEIAHEKGLPVIVDLASGA-LVDKEP------ 204 (395)
T ss_pred cccCcCCHHHHHHHhccC------CeeEEEEeecccccccc-ccHHHHHHHHHHcCCCEEEecCCcc-cccccc------
Confidence 567788899999999773 22333344332 3332 3567899999999999999 33332 211100
Q ss_pred cccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhh
Q psy1785 422 TRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTE 462 (629)
Q Consensus 422 ~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~ 462 (629)
..+. .+..|+|.+++|++|+|++|. +|++.- ++++...
T Consensus 205 ~l~~-~la~GaDLV~~SgdKllgGPq-aGii~G-kKelI~~ 242 (395)
T COG1921 205 DLRE-ALALGADLVSFSGDKLLGGPQ-AGIIVG-KKELIEK 242 (395)
T ss_pred chhH-HHhcCCCEEEEecchhcCCCc-cceEec-hHHHHHH
Confidence 1111 245689999999999999997 555554 4456543
No 388
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.46 E-value=0.21 Score=59.01 Aligned_cols=197 Identities=11% Similarity=0.103 Sum_probs=103.7
Q ss_pred HHHHHHHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCC-CccEEEEEeccchhhhh
Q psy1785 387 IPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAP-QQCSVFLTRHQSVLTEC 463 (629)
Q Consensus 387 l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P-~~~g~ll~r~~~~l~~~ 463 (629)
+++++++|++||+.+++ .+-|..-...-+. ...+|+. .|.+++. |.|+.- ...|+++++++ ... .
T Consensus 608 l~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa------~e~~gv~--PDIi~~g--KgLtgG~~Plaa~l~~~~-I~~-~ 675 (817)
T PLN02974 608 QRALVQVCRSRKIPVIFDEVFTGLWRLGVESA------WELLGCK--PDIACYA--KLLTGGLVPLAATLATEE-VFE-A 675 (817)
T ss_pred HHHHHHHHHHhCCEEEEeecccCCCcccchhh------HHhcCCC--CCEEeec--ccccCCCCccEEEEEcHH-HHH-h
Confidence 78999999999999999 4444432222111 1112332 6888876 777655 35788888763 332 2
Q ss_pred hcCCC--CccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhh-HHHHHHHHHHHHHHHHHHH----hcCCCc
Q psy1785 464 HSASA--SYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDG-LEAHIDKSFDNAKYFTDKI----RHRPGF 536 (629)
Q Consensus 464 ~~~~~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G-~~~~~~~~~~la~~l~~~L----~~~~g~ 536 (629)
+.... ..+.+ .+ | -.+.+..+...-.+|+.+-.++ ++++.++..++..++.+.| .+.|.+
T Consensus 676 f~~~~~~~~~~h----------g~--T-y~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V 742 (817)
T PLN02974 676 FRGPSKLDALLH----------GH--S-YTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNV 742 (817)
T ss_pred hccccccCCccc----------CC--C-CCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 21100 00100 01 1 1233444444455566665443 2344455555656555555 334333
Q ss_pred EEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHH-hcCcEEEeeeecCCccceEEEeecCCCCCHHHH
Q psy1785 537 KLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMM-KSGSMMITYQPIHALPNFFRLVLQNSALDHSDM 615 (629)
Q Consensus 537 ~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~-~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edi 615 (629)
.=+. -.-..+.+.+..+... . .+. ..+...+.+++. ++|.+. .++ + +++|+..- +.++++++
T Consensus 743 ~~VR--g~Gl~~~iel~~~~~~--~---~~~---~~~a~~v~~~~~~~~Gl~~---r~~-G--nvi~l~pP-~~i~~e~l 805 (817)
T PLN02974 743 ERVV--SLGTVLALELDAEGSG--S---GYS---SLYARSVVRRLRREDGIYA---RPL-G--NVVYLMCG-PTTSPETC 805 (817)
T ss_pred eEEE--eeeeEEEEEEecCCcc--c---ccc---hHHHHHHHHHHHHhCCEEE---Eec-C--CEEEEeCC-CCCCHHHH
Confidence 2121 1112233433321100 0 010 123456778888 888543 222 2 57898874 89999999
Q ss_pred HHHHHHHHHH
Q psy1785 616 DYFIDEIERL 625 (629)
Q Consensus 616 d~l~~~i~~l 625 (629)
+.+++.|.+.
T Consensus 806 ~~~~~~l~~~ 815 (817)
T PLN02974 806 TRLLRKVYRR 815 (817)
T ss_pred HHHHHHHHHH
Confidence 9999998764
No 389
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=97.46 E-value=0.063 Score=54.53 Aligned_cols=184 Identities=9% Similarity=0.092 Sum_probs=102.6
Q ss_pred cccccChhHHHHHHHHHHHHHHHhCCCC--CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchH
Q psy1785 247 YTYEVSPVFSLMEEHVLAQMRTIVGFQG--GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYS 324 (629)
Q Consensus 247 ~~~~~~p~~~~~E~~~~~~l~~l~G~~~--~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~S 324 (629)
..|...+.-..+-+.+..++.+-+||.- .+..+|+|...+-++....---+ ...|- .+ .|+..-..
T Consensus 68 cnY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~-----~sdG~---~k-~illPLaP--- 135 (417)
T COG3977 68 CNYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGR-----RSDGT---EK-KILLPLAP--- 135 (417)
T ss_pred hcCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCc-----cCCCc---ce-eEeeccCh---
Confidence 3455555556667778888999999975 57788888777777765532111 12231 11 12212111
Q ss_pred HHHHHHHcCCCCCCEEEEec------CCC----CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHH
Q psy1785 325 IKKLAAFEGLGSDNVYLIKT------DAR----GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIA 391 (629)
Q Consensus 325 i~kaa~~lGlg~~~v~~V~~------d~~----g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~ 391 (629)
+.....++|.+.=..|.. ++. .++|.++|+-- + ..-+|+++-.++.+|.+ +.+.++.
T Consensus 136 --eYiGY~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~--e------~~g~ic~SRPtNPTGNVlTdeE~~kld 205 (417)
T COG3977 136 --EYIGYADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG--E------STGAICVSRPTNPTGNVLTDEELAKLD 205 (417)
T ss_pred --hhccccccccCccceeeccCCcccccccceeeccCHHHcccc--c------ccceEEecCCCCCCCCcccHHHHHHHH
Confidence 111111222221111111 122 36777766422 2 23478888999999988 5677788
Q ss_pred HHHHHcCCeEEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhh
Q psy1785 392 DICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLT 461 (629)
Q Consensus 392 ~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~ 461 (629)
.++++||+.+.+ |||..+--. -++ +...+ ... =-.++.+..|.+..-.-||+++..+ +..+
T Consensus 206 alA~~~giPliIDnAYg~PFP~i---ifs---d~~~~-w~~-NiilC~SLSK~GLPG~R~GIiIane-~viq 268 (417)
T COG3977 206 ALARQHGIPLIIDNAYGVPFPGI---IFS---DATPL-WNE-NIILCMSLSKLGLPGSRCGIIIANE-KVIQ 268 (417)
T ss_pred HHhhhcCCcEEEecccCCCCCce---ecc---ccccc-CCC-CEEEEeehhhcCCCCcceeEEEccH-HHHH
Confidence 899999999999 888643210 000 11111 111 2357888999765445588877654 4444
No 390
>KOG2790|consensus
Probab=97.46 E-value=0.0096 Score=59.78 Aligned_cols=312 Identities=16% Similarity=0.163 Sum_probs=164.9
Q ss_pred cChhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHH
Q psy1785 251 VSPVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLA 329 (629)
Q Consensus 251 ~~p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa 329 (629)
.+.-+..+...+...+++|+..|+ ....|..||-..-+.|+..-+.. .+.| .+-.-|+|..-+-.+..+|.
T Consensus 46 Rsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~g-----lK~g---~~AdYiVTGsWS~KA~~EAk 117 (370)
T KOG2790|consen 46 RSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIG-----LKHG---RCADYVVTGSWSAKAAEEAK 117 (370)
T ss_pred cchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhc-----cccC---CccceEEeccccHHHHHHHH
Confidence 345566777888889999999998 45666666555445555543321 1223 12234555555544444444
Q ss_pred HHcCCCCCCEEEEecCCC--CC-CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc-cCHHHHHHHHHHcCCeEEEec
Q psy1785 330 AFEGLGSDNVYLIKTDAR--GR-MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF-DPIPAIADICAEYDMADSVTW 405 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~~--g~-~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i-dpl~ei~~i~~~~~~~lhVA~ 405 (629)
++--. +.+..+..+- |+ .|++.++...+. -.|-.....|+.|.- |+++ +-.-.+..+..-.
T Consensus 118 k~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~da--------~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDm 182 (370)
T KOG2790|consen 118 KYGTP---NIVIPKLKSYTYGKVPDPSTWELNPDA--------SYVYYCANETVHGVEFDFIP----VNDPKGAVLVADM 182 (370)
T ss_pred hhCCc---eEEeccccccccCcCCChhhcccCCCc--------cEEEEecCceeeceecCCCC----CCCCCCceEEEec
Confidence 43222 4443333221 22 354444332221 156667778888863 3322 0011122221111
Q ss_pred CccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCc-CCCcccCC
Q psy1785 406 NPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDK-FYDTKYDS 484 (629)
Q Consensus 406 gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~~~ 484 (629)
.. -+++.|.| +.. -+.+.+.++|..| |.|.-++++|+. ++.......|.-+.-... ..+..|+
T Consensus 183 SS-nflSrpvD-----------vsk-~gvi~aGAQKN~G-~aG~Tvvivr~d-llg~~~~~tP~v~dyk~~~~NnSlyN- 246 (370)
T KOG2790|consen 183 SS-NFLSRPVD-----------VSK-FGVIFAGAQKNVG-PAGVTVVIVRKD-LLGNALDITPSVLDYKIMDKNNSLYN- 246 (370)
T ss_pred cc-chhcCCcc-----------chh-cceEEeccccccC-ccccEEEEEehh-hhcccccCCccccceeeecccccccc-
Confidence 11 12333332 334 6789999999997 788888889884 554443333322211100 0001111
Q ss_pred CCccCCCCCCcchHHHHHHHHhc-ChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEccCC---CceEEEEEeeCCCCCCC
Q psy1785 485 GDKHIQCGRKPDVLKFWFMWKAK-GTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVLDEP---ECTNISFWYIPPSLRGK 560 (629)
Q Consensus 485 ~~~~~~~sr~~~al~~w~~l~~~-G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~~p---~~~~v~F~~~p~~~~~~ 560 (629)
|+.|. ....+-+.++.+ ...|++++.+...+-++.+++.|.+..||-.+..+| ...+|+||+.++.+
T Consensus 247 ---TpP~f---~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~L--- 317 (370)
T KOG2790|consen 247 ---TPPCF---GIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPVEPSVRSRMNVPFRIEKDEL--- 317 (370)
T ss_pred ---CCCee---eeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEEcccchhhhhhcccceeecchHH---
Confidence 11111 111111222222 345788888889999999999999988986543233 34679999864322
Q ss_pred CchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 561 EDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 561 ~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
.+ ++.+.-.+++ |++.-..+. .+-+|.++- -..+-+++..|++-+++..+
T Consensus 318 ------e~-------eFLkeA~~~~--mv~LKGhRS-VGGiRASlY-NAisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 318 ------EA-------EFLKEAAKEH--MVQLKGHRS-VGGIRASLY-NAISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred ------HH-------HHHHHHHHhh--hhccccccc-cccchhhhh-ccccHHHHHHHHHHHHHHHH
Confidence 11 2222222333 222111111 234899996 66799999999999988764
No 391
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=97.43 E-value=0.017 Score=61.52 Aligned_cols=235 Identities=14% Similarity=0.072 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcC-----
Q psy1785 259 EEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEG----- 333 (629)
Q Consensus 259 E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lG----- 333 (629)
..+..+++.++++-......|+.+||+|+..|++.||... ......| ...++...+.-|-...-+..+.+
T Consensus 61 ~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~-~~~~~~~----r~~il~~~~~yHG~t~~~~s~~~~~~~~ 135 (339)
T PF00202_consen 61 AAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYH-NKRAYTG----RRKILAFEGSYHGRTLGALSLTGNPPYR 135 (339)
T ss_dssp HHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHH-HHTHHHT----TTEEEEETTTB-TSSHHHHHHSSSTHHH
T ss_pred hhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhccc-ccccccC----CceEEEeeeeeeccCcccccccCCcccc
Confidence 3556667888884333578999999999999999999321 1111122 24456667777765444444321
Q ss_pred ----CCCCCEEEEecCCCCC-----CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHHHHHHHHHcCCe
Q psy1785 334 ----LGSDNVYLIKTDARGR-----MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPAIADICAEYDMA 400 (629)
Q Consensus 334 ----lg~~~v~~V~~d~~g~-----~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~ei~~i~~~~~~~ 400 (629)
-....+..+|.+.... -....+++.+.+...+ ....|++--.....|.+-| +++++++|++||+.
T Consensus 136 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gil 213 (339)
T PF00202_consen 136 KGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNAD--EIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGIL 213 (339)
T ss_dssp TTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGG--GEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-E
T ss_pred ccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCC--cEEEEEEeccccccCccccccchhhehcccccccccc
Confidence 1123567788653222 0112244444433222 2234444433333344422 78999999999999
Q ss_pred EEE--ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCC
Q psy1785 401 DSV--TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFY 478 (629)
Q Consensus 401 lhV--A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~ 478 (629)
+.+ ...|.......+ -....++. .|.+++. |.++.-+..|.++++++ +.... ... ...
T Consensus 214 lI~DEV~tG~gRtG~~~------a~~~~gv~--PDiv~~g--K~l~gG~p~sav~~~~~-i~~~~-~~~--~~~------ 273 (339)
T PF00202_consen 214 LIADEVQTGFGRTGKFF------ASEHYGVD--PDIVTFG--KGLGGGLPISAVLGSEE-IMEAF-QPG--SHG------ 273 (339)
T ss_dssp EEEEETTTTTTTTSSSS------GHHHHTSS--SSEEEEE--GGGGTTSSEEEEEEEHH-HHTTS-CTT--SST------
T ss_pred eecccccccccccCCcc------ceeccccc--Ccccccc--cchhhhhhcccccccch-hhccc-ccc--ccc------
Confidence 999 332221111100 11112332 7999997 88877788999999884 33221 100 000
Q ss_pred CcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc
Q psy1785 479 DTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH 532 (629)
Q Consensus 479 ~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~ 532 (629)
. | ..+.+........+|+.+..+++. ++..++.++|.+.|++
T Consensus 274 ------~--T-~~g~p~~~aaa~~~l~~~~~~~~~---~~~~~~g~~l~~~L~~ 315 (339)
T PF00202_consen 274 ------S--T-FGGNPLSCAAALATLEILEEEDLL---ERVRELGERLREGLRE 315 (339)
T ss_dssp ------C--T-TTT-HHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHHHHHHH
T ss_pred ------c--c-cccchHhhhhhhhHHHhhccHHHH---HHHHHHHHHHHHHHHH
Confidence 0 0 123334455555666666555544 4445566666666664
No 392
>KOG3843|consensus
Probab=97.03 E-value=0.0071 Score=59.99 Aligned_cols=231 Identities=15% Similarity=0.172 Sum_probs=136.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCCC-CCeEEeCCch-hhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHH
Q psy1785 253 PVFSLMEEHVLAQMRTIVGFQG-GDGIFCPGGS-MANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAA 330 (629)
Q Consensus 253 p~~~~~E~~~~~~l~~l~G~~~-~~g~~~~GgT-~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~ 330 (629)
.....+..+....+-.|.|+-. .+-++++=.| ++.-..+..-|++ .| ..+++|-. .....|-.|..-
T Consensus 53 sll~~isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~k-rp---------kakyiiw~-ridqks~~ksi~ 121 (432)
T KOG3843|consen 53 SLLACISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHK-RP---------KAKYIIWL-RIDQKSCFKSII 121 (432)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhc-CC---------cccEEEEE-ecchHHHHHHHH
Confidence 3444566677777778888765 4445555333 2222333333333 11 12444433 333444445555
Q ss_pred HcCCCCCCEEEEecCCC---CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccc---cccCHHHHHHHHHHcCCeEEE-
Q psy1785 331 FEGLGSDNVYLIKTDAR---GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLG---AFDPIPAIADICAEYDMADSV- 403 (629)
Q Consensus 331 ~lGlg~~~v~~V~~d~~---g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G---~idpl~ei~~i~~~~~~~lhV- 403 (629)
-.|+ +.+.|..--+ -..|++.+++.|++. | +-++.....||... +-|.+++|+.+|..|+++-.|
T Consensus 122 ~agf---epiiie~i~d~d~l~tdleav~~~iee~---g--~dcilci~sttscfapr~pd~leaiaaica~~diphivn 193 (432)
T KOG3843|consen 122 HAGF---EPIIIENILDGDELITDLEAVEAIIEEL---G--EDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVN 193 (432)
T ss_pred hcCC---CceeeeccccchHHHHhHHHHHHHHHHh---C--CceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhc
Confidence 5676 5555543222 367888888888764 3 22455555555544 458899999999999999888
Q ss_pred -ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCccccCCcCCCccc
Q psy1785 404 -TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKY 482 (629)
Q Consensus 404 -A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~ 482 (629)
|||...--+- ..+.... ..-+ +|.++-+..|.+.+|.|..++..-++..++..-. .| .
T Consensus 194 nayglqsee~i-----~~iaa~~-~~gr-ida~vqsldknf~vpvggaiia~fk~n~iq~iak---~y--------p--- 252 (432)
T KOG3843|consen 194 NAYGLQSEECI-----HKIAAAA-ECGR-IDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAK---MY--------P--- 252 (432)
T ss_pred cccccchHHHH-----HHHHHHh-hhcc-HHHHHHHhhhcceeecchhHhhHhHHHHHHHHHH---hC--------C---
Confidence 8886322110 0000000 1234 8999999999999998865554434344443211 11 1
Q ss_pred CCCCccCCCCCC--cchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhc
Q psy1785 483 DSGDKHIQCGRK--PDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRH 532 (629)
Q Consensus 483 ~~~~~~~~~sr~--~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~ 532 (629)
||. ...+-+...+-.+|..+|.+...+..++=-+++.+|.+
T Consensus 253 ---------grasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 253 ---------GRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred ---------CccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 13566777888899999999988888887777777765
No 393
>PRK02769 histidine decarboxylase; Provisional
Probab=96.94 E-value=0.005 Score=66.57 Aligned_cols=214 Identities=12% Similarity=0.142 Sum_probs=112.1
Q ss_pred CCcccccccccccccC-CCCHHHHHHhhc-----cCCCCCC----CCHHHHHHHHHHHhcccccCCCCccccccCCCCCh
Q psy1785 161 GHPYFVNQLFSSKVNE-WVNPEELEKKLE-----LGFNAGP----SSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDP 230 (629)
Q Consensus 161 ~hP~F~~~l~s~~v~~-~~~~~~l~~~~~-----~~lp~~~----~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~ 230 (629)
+||+||...+.....+ ....+.+....+ ...+..+ ..++++++++.+++..+ .+...|++.++.+.
T Consensus 20 ~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~----~~~~~G~~TsGgTe 95 (380)
T PRK02769 20 HNQYFNVGYPEAADFDYSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIP----FNESWGYITNGGTE 95 (380)
T ss_pred HhhhcccCCCchhhcCHHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCC----CCCCCEEEecChHH
Confidence 4888888877766553 333344433322 1222212 24667778888887543 12346888888888
Q ss_pred HHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCC
Q psy1785 231 YGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASC 310 (629)
Q Consensus 231 ~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~ 310 (629)
..+.+-+.+....+... =.+...|...+.+.++.+|.........+.|.. ....+..+.. +.| ..
T Consensus 96 an~~a~~~ar~~~~~~~-----ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~g~i-d~~~L~~~i~-------~~~--~~ 160 (380)
T PRK02769 96 GNLYGCYLARELFPDGT-----LYYSKDTHYSVSKIARLLRIKSRVITSLPNGEI-DYDDLISKIK-------ENK--NQ 160 (380)
T ss_pred HHHHHHHHHHHhCCCcE-----EEeCCCceehHHHHHHHcCCCCceeccCCCCcC-cHHHHHHHHH-------hCC--CC
Confidence 88777544432222210 112223455566778888876322111112211 1222222221 112 13
Q ss_pred CCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCC--CCcEEEEEeeCCCccccccCHH
Q psy1785 311 PRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEG--AVPFMVSATSGTTVLGAFDPIP 388 (629)
Q Consensus 311 p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g--~~~~~Vvat~Gtt~~G~idpl~ 388 (629)
|.+++++.+++ ..|.+| ++++..+-+.+.| ..|+||++++|....-..++-.
T Consensus 161 t~lvv~t~gtt------------------------~tG~id--pi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~ 214 (380)
T PRK02769 161 PPIIFANIGTT------------------------MTGAID--NIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPP 214 (380)
T ss_pred cEEEEEEeCCC------------------------CCcccC--CHHHHHHHHHHhCCCceEEEEEecccceeecccCccc
Confidence 66667666665 456655 2333333333334 2699999999875442211100
Q ss_pred HHHHHHHHcCCeEEEecCccccccccccccccccc
Q psy1785 389 AIADICAEYDMADSVTWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 389 ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~~ 423 (629)
.+ +. ..-.+++++++|+|+..|..|++++-.
T Consensus 215 ~~-d~---~~~vDsis~s~HK~~~~P~g~G~l~~r 245 (380)
T PRK02769 215 PF-SF---ADGIDSIAISGHKFIGSPMPCGIVLAK 245 (380)
T ss_pred cC-Cc---cCCCCEEEECCcccCCCCCCcEEEEEe
Confidence 00 00 012456699999999989999987543
No 394
>KOG1401|consensus
Probab=96.80 E-value=0.85 Score=48.58 Aligned_cols=162 Identities=15% Similarity=0.079 Sum_probs=91.1
Q ss_pred CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecC---CC----
Q psy1785 275 GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTD---AR---- 347 (629)
Q Consensus 275 ~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d---~~---- 347 (629)
.-..|+.+||+||..|+..||+..+. +++- ..--+|..-+.-|--..-++.+.+. .-+.+|.| ++
T Consensus 117 ~rvff~nsGTeAne~ALK~Ark~~~~---~~~~--~~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~ 188 (433)
T KOG1401|consen 117 ERVFFCNSGTEANETALKFARKFTGK---KHPE--KKTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTA 188 (433)
T ss_pred cEEEEecCCcHHHHHHHHHHHHhhcc---cCCc--cceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeec
Confidence 56889999999999999999986431 1110 0112455566667654444443332 11222211 11
Q ss_pred CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc--cC--HHHHHHHHHHcCCeEEE--ecCccccccccccccccc
Q psy1785 348 GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF--DP--IPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 348 g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i--dp--l~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l 421 (629)
-.-|+++|++.++... | ..-.|++--..-.-|.+ || +..++..|+++++.++. ..-|..-+..- .
T Consensus 189 ~ynd~t~l~k~~~~h~--~-~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~------~ 259 (433)
T KOG1401|consen 189 EYNDSTALEKLFESHK--G-EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYG------W 259 (433)
T ss_pred ccCCHHHHHHHHHhCC--C-ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchH------H
Confidence 1346889999988742 2 23344444444444443 44 67899999999999877 22221111110 0
Q ss_pred cccccccCCcceEEEeCCCCCCCCCCccEEEEEecc
Q psy1785 422 TRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQ 457 (629)
Q Consensus 422 ~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~ 457 (629)
.+..+++. -|.+++ -|.|+.-+..|+++++++
T Consensus 260 a~e~~~~~--PDI~t~--aK~L~gGlPigA~~v~~k 291 (433)
T KOG1401|consen 260 AQEYFGVT--PDITTV--AKPLGGGLPIGATGVRDK 291 (433)
T ss_pred HHHHhCcC--Ccceee--hhhccCCceeEEEeehHH
Confidence 01111221 466555 477777677899999885
No 395
>PLN03032 serine decarboxylase; Provisional
Probab=96.64 E-value=0.054 Score=58.33 Aligned_cols=179 Identities=15% Similarity=0.163 Sum_probs=97.7
Q ss_pred CCHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCccccccChhHHHHHHHHHHHHHHHhCCCCC
Q psy1785 196 SSHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTYEVSPVFSLMEEHVLAQMRTIVGFQGG 275 (629)
Q Consensus 196 ~~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~~ 275 (629)
..++++++++.+++..+ ...+.|++.++.+..++.+-+.+....+... -.+...|+..+.+.++++|+...
T Consensus 66 ~~e~~v~~~ia~llg~~----~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~-----vi~s~~~H~Sv~kaa~~lg~~~~ 136 (374)
T PLN03032 66 QFEVGVLDWFARLWELE----KDEYWGYITTCGTEGNLHGILVGREVFPDGI-----LYASRESHYSVFKAARMYRMEAV 136 (374)
T ss_pred HHHHHHHHHHHHHhCCC----CccCCEEEeCchHHHHHHHHHHHHHhCCCcE-----EEeCCCceeHHHHHHHHcCCCCe
Confidence 36778888888888543 1234588999999888887555443222111 12333455566678888887531
Q ss_pred CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHH
Q psy1785 276 DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESL 355 (629)
Q Consensus 276 ~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~L 355 (629)
..+ +..+..+...++++++.+ ..+ .|.+++++.+++ +.|.+|+ +
T Consensus 137 ---~V~--~d~~g~id~~~L~~~i~~--~~~---~~~lvv~tagtt------------------------~tG~idp--i 180 (374)
T PLN03032 137 ---KVP--TLPSGEIDYDDLERALAK--NRD---KPAILNVNIGTT------------------------VKGAVDD--L 180 (374)
T ss_pred ---Eee--eCCCCcCcHHHHHHHHHH--cCC---CCEEEEEEecCc------------------------CCccCCC--H
Confidence 122 111122222233332211 011 356666666664 4566652 2
Q ss_pred HHHHHHHHh-CC----CCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccccccc
Q psy1785 356 RGEIQRTLA-EG----AVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLTRR 424 (629)
Q Consensus 356 e~~i~~~~~-~g----~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~~~ 424 (629)
+ .|.+.++ .| ..|+||++++|....-..+..+++ +. ..-.+++++++|++...|+.|++++..+
T Consensus 181 ~-eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~-~~---~~~vDSis~s~HK~~g~P~g~G~ll~r~ 249 (374)
T PLN03032 181 D-RILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEV-TF---RKPIGSVSVSGHKFLGCPMPCGVALTRK 249 (374)
T ss_pred H-HHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCccc-CC---CcCCcEEEECcccccCCCcCeEEEEEEc
Confidence 2 3333333 33 358999999977643221111111 11 1125566999999999899999876433
No 396
>KOG0258|consensus
Probab=96.62 E-value=0.15 Score=53.61 Aligned_cols=144 Identities=17% Similarity=0.161 Sum_probs=98.9
Q ss_pred CccccccChhHHHHHHHHHHHHHHHhCCCC--CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcc
Q psy1785 245 SVYTYEVSPVFSLMEEHVLAQMRTIVGFQG--GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAH 322 (629)
Q Consensus 245 ~~~~~~~~p~~~~~E~~~~~~l~~l~G~~~--~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H 322 (629)
+...|..|++..-+-+.+.+.+.+-=|.+. .+.++|.|+|.+....+..-... .+.| ..|-...-.-
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~-----~~~G------vliPiPQYPL 173 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAG-----KKTG------VLIPIPQYPL 173 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcC-----CCCc------eEeecCCCch
Confidence 455677777777777777777777778654 68899999999987776654432 1222 2232333333
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCC
Q psy1785 323 YSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDM 399 (629)
Q Consensus 323 ~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~ 399 (629)
|| -+...+|. +.--.++.-..++.+|+++|++.+++.+ ++..|-.+++.-.++.+|.+ ..+++|..+|+++++
T Consensus 174 Ys--Ati~l~~~-~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l 249 (475)
T KOG0258|consen 174 YS--ATISLLGG-TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGL 249 (475)
T ss_pred hH--HHHHHhCC-cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCe
Confidence 33 22345553 1122334444567999999999999988 78788777788888899987 578888899999998
Q ss_pred eEEE
Q psy1785 400 ADSV 403 (629)
Q Consensus 400 ~lhV 403 (629)
.+..
T Consensus 250 ~lla 253 (475)
T KOG0258|consen 250 VLLA 253 (475)
T ss_pred EEec
Confidence 7765
No 397
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=96.43 E-value=0.0026 Score=66.87 Aligned_cols=174 Identities=17% Similarity=0.212 Sum_probs=39.4
Q ss_pred HHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEE
Q psy1785 263 LAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLI 342 (629)
Q Consensus 263 ~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V 342 (629)
.+.+++++|.. .+.++.+...+.+.++.+-... ..-+..+| .+|-+ . ..+.+....+..|. .++.|
T Consensus 53 ~~ll~~ltgAe--aA~VvNnnaAAv~L~l~~la~~-~EvIvsRG-----elVei-G--gsFRip~vm~~sGa---~lvEV 118 (367)
T PF03841_consen 53 EELLCELTGAE--AALVVNNNAAAVLLALNTLAKG-KEVIVSRG-----ELVEI-G--GSFRIPDVMRQSGA---RLVEV 118 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccc--cccccccccccccccccccccc-cccccccc-----ccccc-c--cccccccccccccc---ccccc
Confidence 34577787765 4566666666655554432110 00001111 11111 0 11223334444444 45444
Q ss_pred ecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCc-----cccccCHHHHHHHHHHcCCeEEEecCccccc-ccccc
Q psy1785 343 KTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTV-----LGAFDPIPAIADICAEYDMADSVTWNPHKLL-TAPQQ 416 (629)
Q Consensus 343 ~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~-----~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~-~~~~~ 416 (629)
-+ ..+..+.+.+++|.+..+ ++.-.+-++. ++.+ +++++++++++|++++++-.|.+.+. ..++.
T Consensus 119 Gt--tN~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~-~~~el~~la~~~~lp~i~DlgsG~l~dl~~~g 189 (367)
T PF03841_consen 119 GT--TNRTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEV-SLEELAELAKEHGLPVIVDLGSGLLVDLSPYG 189 (367)
T ss_dssp ---------------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-
T ss_pred cc--cccccccccccccccccc------ccccccccccccccccccc-cHHHHHHHHhhcCCcEEEECCCCCCcCccccc
Confidence 43 346667788899977432 3333332222 2232 68999999999999999943333221 11111
Q ss_pred ccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhh
Q psy1785 417 CSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTE 462 (629)
Q Consensus 417 ~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~ 462 (629)
.+.--..+. -+..|+|.+++++.|.|++|. +|+++-|+ +++..
T Consensus 190 l~~Ep~v~~-~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk-~lI~~ 232 (367)
T PF03841_consen 190 LPDEPTVQE-YLAAGADLVTFSGDKLLGGPQ-AGIIVGKK-ELIEK 232 (367)
T ss_dssp ----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH-HHHHH
T ss_pred CccccHHHH-HhhcCCCEEEEECCCcCCCCC-eEEEEeCH-HHHHH
Confidence 110001111 256689999999999999987 67776665 45554
No 398
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=96.33 E-value=0.47 Score=50.14 Aligned_cols=281 Identities=14% Similarity=0.159 Sum_probs=151.9
Q ss_pred CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEec-CC-CCCCCHH
Q psy1785 276 DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKT-DA-RGRMLPE 353 (629)
Q Consensus 276 ~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~-d~-~g~~d~~ 353 (629)
..+-|.|||.|.-.+....... .|...|+.|.-+-.--...-.-.|+ +|..-|. |. +..+|.+
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~------------~~~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~ 160 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARF------------FPDATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDFD 160 (396)
T ss_pred hheecCCcchHHHHHHHHHHHh------------CCCceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccHH
Confidence 3577889999875544333222 3566688888764333334455688 7877775 43 3458999
Q ss_pred HHHHHHHHHHhCCCCcEEEEEeeCCCcccc---ccCHHHHHHHHHHcCCeEEE--ecCcccccccccccccccccccc--
Q psy1785 354 SLRGEIQRTLAEGAVPFMVSATSGTTVLGA---FDPIPAIADICAEYDMADSV--TWNPHKLLTAPQQCSVFLTRRNY-- 426 (629)
Q Consensus 354 ~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~---idpl~ei~~i~~~~~~~lhV--A~gg~~l~~~~~~~~~~l~~~~~-- 426 (629)
.+-+.|+...+ | -..+.=.+.-+.+|. .+.-.+|.++.++.++.-.+ ||-|+.--... | .+ ..|.+
T Consensus 161 ~mla~L~~a~~-~--~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~Glee-D--a~-~lR~~a~ 233 (396)
T COG1448 161 GMLADLKTAPE-G--SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEE-D--AY-ALRLFAE 233 (396)
T ss_pred HHHHHHHhCCC-C--CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHH-H--HH-HHHHHHH
Confidence 88888877543 2 222222334455554 23466888999998876666 76554321110 0 00 01111
Q ss_pred -ccCCcceEEEeCCCCCCCC---CCccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHH-
Q psy1785 427 -VIEVVADSVTWNPHKLLTA---PQQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFW- 501 (629)
Q Consensus 427 -~i~~gaDsv~~~~HK~l~~---P~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w- 501 (629)
+.+ =.++.+..|.++. =.||=.+...+.+...+.+++-..-++.. |+.....|. .+++.-
T Consensus 234 ~~~~---~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~---ySnPP~~Ga---------~vva~IL 298 (396)
T COG1448 234 VGPE---LLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTN---YSNPPAHGA---------AVVATIL 298 (396)
T ss_pred hCCc---EEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhc---cCCCchhhH---------HHHHHHh
Confidence 122 3677888888764 12233333445444444433221112111 111111111 111111
Q ss_pred --HHHHhcChhhHHHHHHHHHHHHHHHHHHHhcC-C--CcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHH
Q psy1785 502 --FMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHR-P--GFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPK 576 (629)
Q Consensus 502 --~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~-~--g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~ 576 (629)
-.|++.-..-+..+.++..++++.|.+.|++. + .|..+. ...+.++|. ++. ++
T Consensus 299 ~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~--~Q~GMFsy~----Gls----------------~~ 356 (396)
T COG1448 299 NNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFII--SQRGMFSYT----GLS----------------PE 356 (396)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHh--hcCceeecC----CCC----------------HH
Confidence 12333334556667778888999999999883 1 355443 455666553 221 23
Q ss_pred HHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 577 IKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 577 i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
-..+|.++-.+++.. .| |+++ ...++..|+++.++|.++
T Consensus 357 QV~rLree~~IY~v~---sG-----Ri~v--aGl~~~ni~~va~ai~~v 395 (396)
T COG1448 357 QVDRLREEFGIYLVA---SG-----RINV--AGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHHHHHhccEEEec---CC-----eeee--ccCChhhHHHHHHHHHhh
Confidence 345666665444331 12 8898 478889999999998764
No 399
>KOG1403|consensus
Probab=95.86 E-value=1.1 Score=45.63 Aligned_cols=307 Identities=16% Similarity=0.153 Sum_probs=153.3
Q ss_pred HHHHHHHHHHhC-CCC-CCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHc-----
Q psy1785 260 EHVLAQMRTIVG-FQG-GDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFE----- 332 (629)
Q Consensus 260 ~~~~~~l~~l~G-~~~-~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~l----- 332 (629)
.++++...++.. +|+ +...|+.+||++|-.|+..||.... ...+|.....-|--+.....+.
T Consensus 86 d~lv~cA~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftk-----------hqDvItldHAYHGHl~s~mE~SPYKF~ 154 (452)
T KOG1403|consen 86 DELVQCARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTK-----------HQDVITLDHAYHGHLQSVMEVSPYKFN 154 (452)
T ss_pred HHHHHHHHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcc-----------cCceEEEechhccceeeeeeccceecc
Confidence 344444444432 233 5679999999999999999998521 1223322222232222222211
Q ss_pred -CCCC---CCEEEEecCC---------------CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccC----HHH
Q psy1785 333 -GLGS---DNVYLIKTDA---------------RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDP----IPA 389 (629)
Q Consensus 333 -Glg~---~~v~~V~~d~---------------~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idp----l~e 389 (629)
|-|. +-|..-|+.+ .|+.-.+++++.+++..++|......++-.-.+-.|.|-| +++
T Consensus 155 ~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~ 234 (452)
T KOG1403|consen 155 QGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQA 234 (452)
T ss_pred CCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHH
Confidence 1111 2233334322 1222235667777776666643222222222233344433 566
Q ss_pred HHHHHHHcCCeEEE--------ecCccccccccccccccccccccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhh
Q psy1785 390 IADICAEYDMADSV--------TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLT 461 (629)
Q Consensus 390 i~~i~~~~~~~lhV--------A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~ 461 (629)
+++..+.+|-.++. -.|-+.|... .+. + . -|+++. -|.+|--...+++.++.+ ..
T Consensus 235 Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq--------~y~-f---i-PDIVtm--gKpmGNGhPVa~Vattke-IA- 297 (452)
T KOG1403|consen 235 VADAVRSAGGVCIADEVQVGFGRVGSHYWAFQ--------TYN-F---I-PDIVTM--GKPMGNGHPVAAVATTKE-IA- 297 (452)
T ss_pred HHHHHhcCCCeEEeehhhhcccccchhhhhhh--------hhc-c---c-cchhee--cccCCCCCeeeEEeccHH-HH-
Confidence 77777777755554 2455566544 221 1 1 466654 355555555677777653 33
Q ss_pred hhhcC-CCCccccCCcCCCcccCCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCC-CcEEE
Q psy1785 462 ECHSA-SASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRP-GFKLV 539 (629)
Q Consensus 462 ~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~-g~~l~ 539 (629)
++|.. ...|... -+|.+.........|+....+.+++ +..++.++|...|++.. ..+++
T Consensus 298 ~Af~atgv~YFNT----------------yGGnPVsCAv~laVm~v~e~E~Lq~---ha~~vG~~L~~lL~~~k~kh~~I 358 (452)
T KOG1403|consen 298 QAFHATGVEYFNT----------------YGGNPVSCAVGLAVMRVCEDENLQE---HAQQVGEKLEVLLRRLKQKHECI 358 (452)
T ss_pred HHhccccceehhc----------------cCCCchhHHHHHHHHHHHhhhhHHH---HHHHHHHHHHHHHHHHhhhccce
Confidence 33332 4444421 1444544444445566666665554 45557777777766532 35666
Q ss_pred ccCCCceEEEEEee---CCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHH
Q psy1785 540 LDEPECTNISFWYI---PPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMD 616 (629)
Q Consensus 540 ~~~p~~~~v~F~~~---p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid 616 (629)
. +-+ ++=.|+-+ -+...-.+ + .+.+..+..+|.+...++++.-. .+ .|.|++-.- -..++++++
T Consensus 359 G-DvR-GvGLFiGIdLVkD~~tRtP---~-----tk~A~~~v~rlke~y~VLlsaDG-Ph-~NilKiKPP-mCFneena~ 425 (452)
T KOG1403|consen 359 G-DVR-GVGLFIGIDLVKDRKTRTP---D-----TKEAHWVVNRLKELYRVLLSADG-PH-RNILKIKPP-MCFNEENAD 425 (452)
T ss_pred e-ccc-cceEEEeeeeecccccCCC---c-----HHHHHHHHHHHHHhhhEEEecCC-CC-CceeecCCC-cccChhhHH
Confidence 6 321 12234322 11111111 1 11234567778777655555321 22 267887662 456788888
Q ss_pred HHHHHHHHHh
Q psy1785 617 YFIDEIERLG 626 (629)
Q Consensus 617 ~l~~~i~~l~ 626 (629)
.++..+.++.
T Consensus 426 e~v~~ld~iL 435 (452)
T KOG1403|consen 426 EFVLGLDEIL 435 (452)
T ss_pred HHHHHHHHHH
Confidence 8888777653
No 400
>KOG0633|consensus
Probab=95.56 E-value=0.72 Score=46.19 Aligned_cols=68 Identities=13% Similarity=-0.009 Sum_probs=52.4
Q ss_pred HHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc-CCeEEE
Q psy1785 329 AAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY-DMADSV 403 (629)
Q Consensus 329 a~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~-~~~lhV 403 (629)
|++-++ +|+.+|.+++..++++++.+.+..+ ..+.++.++..++.+|++-..+.|.++.+-- +..+.|
T Consensus 128 A~iNd~---eVvkvpl~pdF~lnvdai~evl~~d----s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVv 196 (375)
T KOG0633|consen 128 AAINDA---EVVKVPLNPDFSLNVDAIAEVLELD----SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVV 196 (375)
T ss_pred eecCCc---eEEEecCCCCccccHHHHHHHHhcc----ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEE
Confidence 456677 9999999999999999888877654 3577899999999999987777777776543 334444
No 401
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=94.89 E-value=0.69 Score=48.79 Aligned_cols=217 Identities=14% Similarity=0.153 Sum_probs=115.0
Q ss_pred HHHHhCCCCCCeEEeC---CchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHc----------
Q psy1785 266 MRTIVGFQGGDGIFCP---GGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFE---------- 332 (629)
Q Consensus 266 l~~l~G~~~~~g~~~~---GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~l---------- 332 (629)
.++.||.++ +.+-+ +||.|.-.++...++. | .-.++.++...-.+.+...+.
T Consensus 63 yA~vfgaE~--ALVRpq~vSGTHAi~~~Lfg~Lrp--------G-----D~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~ 127 (403)
T PF06838_consen 63 YADVFGAED--ALVRPQFVSGTHAIALALFGVLRP--------G-----DELLSITGKPYDTLEEVIGIRGNGPGSLKEF 127 (403)
T ss_dssp HHHHCT-SE--EEEETTS-SHHHHHHHHHHHH--T--------T------EEEESSSS--CCHHHHHTSSSSSSSSTGGG
T ss_pred HHHHhCchh--hhhcccccchHHHHHHHHHhcCCC--------C-----CeEEEcCCCchhhHHHHhCCCCCCCCChHHh
Confidence 678888764 33333 6788776666655442 1 223445566555555554332
Q ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEE--eeC--CCccccccCHHHHHHHHHHcC--CeEEE--e
Q psy1785 333 GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSA--TSG--TTVLGAFDPIPAIADICAEYD--MADSV--T 404 (629)
Q Consensus 333 Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vva--t~G--tt~~G~idpl~ei~~i~~~~~--~~lhV--A 404 (629)
|+ +...|+..++|.+|.+.++++|... +.+|.. +-| .-...+++.|+++.+.+|+.+ +++.| +
T Consensus 128 Gi---~Y~~v~L~~dg~~D~~~i~~~~~~~------tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNC 198 (403)
T PF06838_consen 128 GI---KYREVPLTEDGTIDWEAIKKALKPN------TKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNC 198 (403)
T ss_dssp T----EEEE--B-TTSSB-HHHHHHHHHTT------EEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-T
T ss_pred Cc---eeEEEeecCCCCcCHHHHHHhhccC------ceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 34 6788999999999999999999852 222222 222 334456788888888888874 67777 8
Q ss_pred cCccccccccccccccccccccccCCcceEEEeCCCCCCCCCC-ccEEEEEeccchhhhhh-cCCCCccccCCcCCCccc
Q psy1785 405 WNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQ-QCSVFLTRHQSVLTECH-SASASYLFQKDKFYDTKY 482 (629)
Q Consensus 405 ~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~-~~g~ll~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~ 482 (629)
||=+.-...| .+-|||.+..+.=|..|+-+ .+|..++.++++.+.+- ...++=|.
T Consensus 199 YGEFvE~~EP-------------~~vGADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG---------- 255 (403)
T PF06838_consen 199 YGEFVETQEP-------------TEVGADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIG---------- 255 (403)
T ss_dssp TTTTTSSS-G-------------GGGT-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTG----------
T ss_pred cceeccccCc-------------cccchhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCccc----------
Confidence 8875533322 34489999999999886643 37777777777776541 11222221
Q ss_pred CCCCccCCCCCCcchHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHhcCCCcEEEc
Q psy1785 483 DSGDKHIQCGRKPDVLKFWFMWKAKGTDGLEAHIDKSFDNAKYFTDKIRHRPGFKLVL 540 (629)
Q Consensus 483 ~~~~~~~~~sr~~~al~~w~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~g~~l~~ 540 (629)
-++|-.+...+..+- |--==-..+...++-|......+++. ||++..
T Consensus 256 ------~e~G~t~~~~R~~~Q----GlFlAP~vV~eAlKgaif~A~~fe~l-G~~v~P 302 (403)
T PF06838_consen 256 ------KEVGATLGTNRLMFQ----GLFLAPHVVGEALKGAIFAAALFEKL-GFEVSP 302 (403)
T ss_dssp ------GGSS--TTTHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHT-T-EEES
T ss_pred ------cccccCcchHHHHHh----HHhhchHHHHHHHHHHHHHHHHHHHc-CCcCCC
Confidence 123333322222110 00001235566666677777777776 999864
No 402
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=93.34 E-value=3.6 Score=43.85 Aligned_cols=306 Identities=12% Similarity=0.089 Sum_probs=137.0
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCC-------CCCCeEEEEcCCcchHHHHHHHHc
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLA-------SCPRLVLYTSEDAHYSIKKLAAFE 332 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~-------~~p~~vv~~s~~~H~Si~kaa~~l 332 (629)
-++.+.+++++|.+..+.+...+.|. |++-...++.... |+. ..++...+|.--..-.-...+..+
T Consensus 72 pe~r~l~a~llgv~~~~viv~gNSSL-~lM~d~i~~a~~~------G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~ 144 (425)
T PF12897_consen 72 PEARELFAELLGVPPENVIVGGNSSL-NLMHDTISRAMLH------GVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF 144 (425)
T ss_dssp HHHHHHHHHHHTS-GGGEEE-SS-HH-HHHHHHHHHHHHH--------TT-SS-GGGSS--EEEEEES--HHHHHHHHHC
T ss_pred HHHHHHHHHHhCCCHHHEEEeccchH-HHHHHHHHHHHhc------CCCCCCCCchhccCceEEecCCCchHHHHHHHhh
Confidence 45667799999999766555444443 4444444433221 221 123444454433322233456789
Q ss_pred CCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH----HcCCeEEE--ecC
Q psy1785 333 GLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA----EYDMADSV--TWN 406 (629)
Q Consensus 333 Glg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~----~~~~~lhV--A~g 406 (629)
|+ +.+.||.+++| .|++.+|+.+.++-.-..+| +| ---++.+|..-.=+-+++++. ..+..+.- ||.
T Consensus 145 Gi---emi~VpM~~dG-PDmD~Ve~LV~~D~svKGiW--cV-P~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~ 217 (425)
T PF12897_consen 145 GI---EMIPVPMTEDG-PDMDMVEELVAEDPSVKGIW--CV-PKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA 217 (425)
T ss_dssp T----EEEEEEEETTE-E-HHHHHHHTHTSTTEEEEE--E--SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred Cc---EEEecCCCCCC-CCHHHHHHHHhcCCccceEE--eC-CCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence 99 99999999888 47778888886543211122 22 234566666532233333332 23455555 888
Q ss_pred ccccccc-cccc--cccccc-cccccCCcceEEEeCCCCCCCCCCccEEEEEeccch--hhhhhcCCCCccccCCcCCCc
Q psy1785 407 PHKLLTA-PQQC--SVFLTR-RNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSV--LTECHSASASYLFQKDKFYDT 480 (629)
Q Consensus 407 g~~l~~~-~~~~--~~~l~~-~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~--l~~~~~~~~~yl~~~~~~~~~ 480 (629)
-|-+... +..- .+ +.. +.-|-.. -=.+-.+..|--+.-.|.+++......+ +...++ .+-|.
T Consensus 218 vHhL~~~~~~~~~~ni-l~~~~~AGnpd-rv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~--~~tIg-------- 285 (425)
T PF12897_consen 218 VHHLYDEEPRDALLNI-LDACAKAGNPD-RVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLS--VQTIG-------- 285 (425)
T ss_dssp T-BSSSSSS------H-HHHHHHTT-TT-SEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHH--HH-S---------
T ss_pred EeeccccccchhhhHH-HHHHHHcCCCC-eEEEEecccccccCCcceeeeecCHHHHHHHHHHhc--CceeC--------
Confidence 8876432 1110 00 110 0001111 2244566778777767777776655422 111111 00010
Q ss_pred ccCCCCccCCCCCCcchHHHHHHHHhcC-hh-hHHHHHHHHHHH--------HHHHHHHHhcCCCcEEEccCCCce-EEE
Q psy1785 481 KYDSGDKHIQCGRKPDVLKFWFMWKAKG-TD-GLEAHIDKSFDN--------AKYFTDKIRHRPGFKLVLDEPECT-NIS 549 (629)
Q Consensus 481 ~~~~~~~~~~~sr~~~al~~w~~l~~~G-~~-G~~~~~~~~~~l--------a~~l~~~L~~~~g~~l~~~~p~~~-~v~ 549 (629)
.+-+.-....+.++ .+ |++++.+++.++ -+.|.++|..-.++--+. .|.-+ -|+
T Consensus 286 --------------pdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt-~P~GGYFIs 350 (425)
T PF12897_consen 286 --------------PDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWT-KPKGGYFIS 350 (425)
T ss_dssp ----------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE----SBSS-EE
T ss_pred --------------ccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEec-CCCCceEEE
Confidence 11122222333333 45 787777766553 344555665112443344 45433 355
Q ss_pred EEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEEEe-e--eecCCc--cceEEEeecCCCCCHHHHHHHHHHHHH
Q psy1785 550 FWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMMIT-Y--QPIHAL--PNFFRLVLQNSALDHSDMDYFIDEIER 624 (629)
Q Consensus 550 F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~i~-~--~~~~~~--~~~lR~~~~n~~~t~edid~l~~~i~~ 624 (629)
|...+ | -++++.+...+.|..+.. + .|+... ...||++.+ +-+.+|++...+.+.-
T Consensus 351 ld~~~----G-------------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS--~P~leel~~Am~~~~~ 411 (425)
T PF12897_consen 351 LDVLD----G-------------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS--YPSLEELETAMDVFAT 411 (425)
T ss_dssp EEEST----T--------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S--SS-HHHHHHHHHHHHH
T ss_pred EecCC----C-------------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC--CCCHHHHHHHHHHHHH
Confidence 65432 2 135788888999976533 1 122211 246999995 6678888888776654
Q ss_pred H
Q psy1785 625 L 625 (629)
Q Consensus 625 l 625 (629)
+
T Consensus 412 c 412 (425)
T PF12897_consen 412 C 412 (425)
T ss_dssp H
T ss_pred H
Confidence 3
No 403
>KOG1405|consensus
Probab=91.39 E-value=13 Score=39.18 Aligned_cols=217 Identities=15% Similarity=0.154 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHHhCCCCcEE-EEE----eeCCCccccccCHHHHHHHHHHcCCeEEE---ecCccccccccccccccccc
Q psy1785 352 PESLRGEIQRTLAEGAVPFM-VSA----TSGTTVLGAFDPIPAIADICAEYDMADSV---TWNPHKLLTAPQQCSVFLTR 423 (629)
Q Consensus 352 ~~~Le~~i~~~~~~g~~~~~-Vva----t~Gtt~~G~idpl~ei~~i~~~~~~~lhV---A~gg~~l~~~~~~~~~~l~~ 423 (629)
++++|+.|.+-.++. .|.. +++ +=|+-..++-|=+..+++++++|++.+.| --|++. -.. +.-+
T Consensus 255 l~~Ve~li~~~~~k~-~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGa-TGk------~WaH 326 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKK-KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGA-TGK------FWAH 326 (484)
T ss_pred HHHHHHHHHHHhhcC-CCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCc-cCc------eeee
Confidence 456677777655443 3432 222 23677777777789999999999999999 223321 111 1123
Q ss_pred cccccCCcceEEEeCCCCCCCCCCccEEEEEeccchhhhhhcCCCCc-cccCCcCCCcccCCCCccCCCCCCcchHHHHH
Q psy1785 424 RNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRHQSVLTECHSASASY-LFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWF 502 (629)
Q Consensus 424 ~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~~~~l~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~ 502 (629)
.+.+++.-.|.++++ -|+.. |.++..+ .+. .+.+| ++.. | +|-++..+-+-.
T Consensus 327 ehw~l~~PpD~vTFS-KK~q~-----gGffh~~-~fr-----pn~pYrifNT------------W---mGdP~k~lll~~ 379 (484)
T KOG1405|consen 327 EHWNLDSPPDVVTFS-KKFQT-----GGFFHDE-EFR-----PNEPYRIFNT------------W---MGDPSKNLLLEE 379 (484)
T ss_pred hhcCCCCCccceehh-hhhhc-----CccccCc-ccC-----CCchHHHhhh------------h---cCChHHHHHHHH
Confidence 333455558988887 34443 3333322 221 22233 2221 1 444555665656
Q ss_pred HHHhcChhhHHHHHHHHHHHHHHHHHHHhc----CCCcEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHH
Q psy1785 503 MWKAKGTDGLEAHIDKSFDNAKYFTDKIRH----RPGFKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIK 578 (629)
Q Consensus 503 ~l~~~G~~G~~~~~~~~~~la~~l~~~L~~----~~g~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~ 578 (629)
.++.+-++++- +++....++|.++|.+ .|+. +..-.--++++-|--|.+ .. -..+.
T Consensus 380 vv~~I~~~~Ll---~n~~~vG~~l~~gL~~Lq~~~p~~--~~~~RGrGTF~a~d~ps~--------~~-------Rdk~i 439 (484)
T KOG1405|consen 380 VVQEIKREDLL---NNVAHVGKALLKGLLELQAKYPGK--INNLRGRGTFIAWDCPSG--------SI-------RDKLI 439 (484)
T ss_pred HHHHHhHHHHH---HHHHHHHHHHHHHHHHHHHhCchh--hhcccccceEEEEeCCCh--------HH-------HHHHH
Confidence 66666665544 4444456666666654 3443 110122344444433321 11 12456
Q ss_pred HHHHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhcC
Q psy1785 579 ERMMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHDL 629 (629)
Q Consensus 579 ~~l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~l 629 (629)
..+..+|.- +++. |. ..+|+-.+ .-.++.+.+-+++.+.++.++|
T Consensus 440 ~~~~~nGv~-~GGC---g~-~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405|consen 440 LIARLNGVN-LGGC---GD-KSIRFRPS-LVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred HHHHHcCce-eccc---cc-ceeeeccc-eeehhhhHHHHHHHHHHHhccC
Confidence 667778853 3322 22 36888886 7889999999999999887654
No 404
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=87.70 E-value=4.5 Score=42.60 Aligned_cols=68 Identities=25% Similarity=0.294 Sum_probs=37.2
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccc
Q psy1785 346 ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVF 420 (629)
Q Consensus 346 ~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~ 420 (629)
..|.++ ++ ++|.+.+++...|++|+++++...... ..-........-.+++.+++++++..|..|+.+
T Consensus 160 ~tG~~~--~~-~~i~~~~~~~~~~l~vD~a~~~~~~~~----~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~ 227 (345)
T cd06450 160 DTGAID--PL-EEIADLAEKYDLWLHVDAAYGGFLLPF----PEPRHLDFGIERVDSISVDPHKYGLVPLGCSAV 227 (345)
T ss_pred CCCCCC--CH-HHHHHHHHHhCCeEEEechhhHHHhhC----hhhHHHhcCccccCEEEEchhHhhCCCcchHHH
Confidence 455543 23 333344444568999999976544321 111111112222344578999988887777754
No 405
>KOG1412|consensus
Probab=87.48 E-value=24 Score=36.69 Aligned_cols=290 Identities=12% Similarity=0.142 Sum_probs=141.6
Q ss_pred CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHH
Q psy1785 276 DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESL 355 (629)
Q Consensus 276 ~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~L 355 (629)
.|+-+-+||.|+..+..-- .+. .++-.||.|.-+-..-.....-.|+-+-.....--.++-.+|++.+
T Consensus 101 ~~vQslsGTGAl~~~A~Fl-~~~-----------~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~ 168 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFL-ATF-----------YNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGF 168 (410)
T ss_pred cceeeccccchhhhhHHHH-HHh-----------cccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHH
Confidence 3566778888765443221 111 2445688888774443444444554211333332234457888877
Q ss_pred HHHHHHHHhCCCCcEEEEEeeCCCccccccCHH----HHHHHHHHcCCe--EEEecCccccccccccccccccccccccC
Q psy1785 356 RGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIP----AIADICAEYDMA--DSVTWNPHKLLTAPQQCSVFLTRRNYVIE 429 (629)
Q Consensus 356 e~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~----ei~~i~~~~~~~--lhVA~gg~~l~~~~~~~~~~l~~~~~~i~ 429 (629)
...|+...+ | -..|.-.+.-+.+| +||-+ +|+++.+..++. +++||-|+.--.+ +-... -.|.+ ++
T Consensus 169 Lsdl~~APe-~--si~iLhaCAhNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~--~~Daw-AiR~f-V~ 240 (410)
T KOG1412|consen 169 LSDLESAPE-G--SIIILHACAHNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDL--DADAW-AIRYF-VE 240 (410)
T ss_pred HHHHhhCCC-C--cEEeeeccccCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCc--cccHH-HHHHH-Hh
Confidence 777765422 2 22333333345555 47754 577777776653 3348777553211 10000 01111 22
Q ss_pred Ccc-eEEEeCCCCCCCC--C-CccEEEEEeccchhhhhhcCCCCccccCCcCCCcccCCCCccCCCCCCcchHHHHH--H
Q psy1785 430 VVA-DSVTWNPHKLLTA--P-QQCSVFLTRHQSVLTECHSASASYLFQKDKFYDTKYDSGDKHIQCGRKPDVLKFWF--M 503 (629)
Q Consensus 430 ~ga-Dsv~~~~HK~l~~--P-~~~g~ll~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~w~--~ 503 (629)
.|. =.++-++-|-+|. + .||=-+.++++.......++-.--++. .. ...+-+| . |. +.++.. .
T Consensus 241 ~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~-~~--SNPPAyG------A-rI-V~kvL~tP~ 309 (410)
T KOG1412|consen 241 QGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRS-NW--SNPPAYG------A-RI-VHKVLSTPE 309 (410)
T ss_pred cCCeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhh-cc--CCCcchh------h-HH-HHHHhcCHH
Confidence 222 2566677776654 2 334445555554332222211111111 00 0000011 0 10 011110 0
Q ss_pred HHhcChhhHHHHHHHHHHHHHHHHHHHhcC--CC-cEEEccCCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHH
Q psy1785 504 WKAKGTDGLEAHIDKSFDNAKYFTDKIRHR--PG-FKLVLDEPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKER 580 (629)
Q Consensus 504 l~~~G~~G~~~~~~~~~~la~~l~~~L~~~--~g-~~l~~~~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~ 580 (629)
++..-...++.+..|..++...|++.|.++ || |.-+. .+.+.++|. ++ ++.-.+.
T Consensus 310 lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~--~QiGMFSyT----GL----------------tp~qV~~ 367 (410)
T KOG1412|consen 310 LREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHIT--QQIGMFSYT----GL----------------TPAQVDH 367 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH--hhccceeec----CC----------------CHHHHHH
Confidence 111113456677788888999999988764 33 22111 356666664 11 2345677
Q ss_pred HHhcCcEEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhhc
Q psy1785 581 MMKSGSMMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGHD 628 (629)
Q Consensus 581 l~~~G~~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~~ 628 (629)
|.++..+++.. +| |++++ ..+...+|++.++|.+..+.
T Consensus 368 li~~h~vyLl~---~G-----RInis--GLN~~NveyVAkAIde~Vr~ 405 (410)
T KOG1412|consen 368 LIENHKVYLLS---DG-----RINIS--GLNMKNVEYVAKAIDETVRA 405 (410)
T ss_pred HHHhceEEEec---CC-----cEeee--ccccccHHHHHHHHHHHHHh
Confidence 88887766432 22 66774 45566788888888776553
No 406
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=78.25 E-value=8.4 Score=39.67 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=68.4
Q ss_pred CEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEee--CCCccccccCHHHHHHHHHHcCCeEEE----ecCccccc
Q psy1785 338 NVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATS--GTTVLGAFDPIPAIADICAEYDMADSV----TWNPHKLL 411 (629)
Q Consensus 338 ~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~--Gtt~~G~idpl~ei~~i~~~~~~~lhV----A~gg~~l~ 411 (629)
..+.||...+|++|.+.+++.|.+..+ -+++--+. +.-...++++|+++..+.|+.|--+.| +||-+.--
T Consensus 141 ~Y~~v~Lt~~gkiD~~~v~~~i~~~tk----li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~ 216 (416)
T COG4100 141 KYKAVPLTADGKIDIQAVKTAISDRTK----LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE 216 (416)
T ss_pred ceeecccccCCcccHHHHHHhcCccce----EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc
Confidence 567888889999999999999986322 22232222 233445678888888999998755544 77765432
Q ss_pred cccccccccccccccccCCcceEEEeCCCCCCCCCCc-cEEEEEeccchhhh
Q psy1785 412 TAPQQCSVFLTRRNYVIEVVADSVTWNPHKLLTAPQQ-CSVFLTRHQSVLTE 462 (629)
Q Consensus 412 ~~~~~~~~~l~~~~~~i~~gaDsv~~~~HK~l~~P~~-~g~ll~r~~~~l~~ 462 (629)
-.| .+-|||.+..+.=|.-|.-.. .|..+..+..+...
T Consensus 217 ~EP-------------t~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~ 255 (416)
T COG4100 217 KEP-------------THVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEA 255 (416)
T ss_pred cCc-------------cccchhhhccceeeCCCCceeeccceeechHHHHHh
Confidence 222 234788888888886554322 44444444455544
No 407
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=56.84 E-value=2.4e+02 Score=30.87 Aligned_cols=45 Identities=24% Similarity=0.330 Sum_probs=36.5
Q ss_pred CChhHHHHhhcccCCCCCCChhHHHHHHHHHh-hcccccCCcccccc
Q psy1785 123 VNPEELEKKLELGFNAGPSSHGKLIDLMKTVI-QYSVKTGHPYFVNQ 168 (629)
Q Consensus 123 ~~p~el~~~l~~~lp~~~~~~~~ll~~~~~~l-~y~v~t~hP~F~~~ 168 (629)
.-|++++.....+||+++ +.+++++.+..+. ++...+.|+.|++.
T Consensus 30 ~~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~ 75 (447)
T PRK00451 30 DIPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGA 75 (447)
T ss_pred hCCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcc
Confidence 468999999999999986 9999999998765 56666678888775
No 408
>KOG1383|consensus
Probab=54.90 E-value=3.3e+02 Score=30.10 Aligned_cols=27 Identities=4% Similarity=0.086 Sum_probs=22.0
Q ss_pred hcccCCCCCCChhHHHHHHHHHhhccc
Q psy1785 132 LELGFNAGPSSHGKLIDLMKTVIQYSV 158 (629)
Q Consensus 132 l~~~lp~~~~~~~~ll~~~~~~l~y~v 158 (629)
-...+|+.+.+.+++++.+.+.+.+--
T Consensus 52 ~~~~lP~~gl~~d~v~~~i~~~~~ld~ 78 (491)
T KOG1383|consen 52 YFFTLPSKGLPKDAVLELINDELMLDG 78 (491)
T ss_pred eeecCCCCCCCHHHHHHHHHHHhccCC
Confidence 346899999999999999998765443
No 409
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=54.79 E-value=18 Score=37.18 Aligned_cols=59 Identities=15% Similarity=0.161 Sum_probs=46.6
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY 397 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~ 397 (629)
....|.+++|.+|.+.+++.++...+.|-.-+++.++.|....-+.+.-.++.+++.+.
T Consensus 7 ~~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 7 ALVTPFKDDGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 34556788999999999999999999887777777777777777777777777766554
No 410
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=53.24 E-value=19 Score=37.53 Aligned_cols=66 Identities=17% Similarity=0.177 Sum_probs=51.1
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc--C-CeEEEecC
Q psy1785 341 LIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY--D-MADSVTWN 406 (629)
Q Consensus 341 ~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~--~-~~lhVA~g 406 (629)
.-|.+++|.+|.+.+++.++...+.|-.-+++.++.|...+-+.+.-.++.+.+.+. + +.+.+..|
T Consensus 13 vTPF~~dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~~~grvpviaG~g 81 (299)
T COG0329 13 VTPFDEDGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEAVGGRVPVIAGVG 81 (299)
T ss_pred ccCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHHHCCCCcEEEecC
Confidence 345677899999999999999999997777888888888888888877887777764 2 44544333
No 411
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=53.21 E-value=20 Score=37.10 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=45.0
Q ss_pred CEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q psy1785 338 NVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE 396 (629)
Q Consensus 338 ~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~ 396 (629)
-....|.+++|.+|.+.+++.++...+.|-.-+++.++.|....-+.+.-.++.+.+.+
T Consensus 7 ~~~~TPf~~dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~ 65 (292)
T PRK03170 7 TALVTPFKEDGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVE 65 (292)
T ss_pred eeeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHH
Confidence 34556778999999999999999999988777777777777777776666666665444
No 412
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=52.83 E-value=23 Score=36.86 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=44.4
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA 395 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~ 395 (629)
...-|.|++|++|.+.+++.++...++|-.-+++.++.|.....+.+.-.++.+.+.
T Consensus 7 a~~TPf~~dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~ 63 (294)
T TIGR02313 7 PLITPFKRNGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAI 63 (294)
T ss_pred eeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHH
Confidence 345577899999999999999999998877777777777777777766666666543
No 413
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=52.68 E-value=3.1e+02 Score=30.39 Aligned_cols=62 Identities=18% Similarity=0.321 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH---HcCCeEEEecCccccccccccccccc
Q psy1785 352 PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA---EYDMADSVTWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 352 ~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~---~~~~~lhVA~gg~~l~~~~~~~~~~l 421 (629)
+++|+ +|.+.+++..+|++|++++|. ++ ..+.++.+ +.|..+.+.++.++++..|.++++++
T Consensus 221 ~ddL~-eIa~la~k~gI~lIvDaAyg~---~~----~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~ 285 (444)
T TIGR03531 221 PDDIE-EIAKICANYDIPHIVNNAYGL---QS----NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIY 285 (444)
T ss_pred hhCHH-HHHHHHHHcCCEEEEECcCcC---cC----hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEE
Confidence 44554 344455667799999999984 33 33333332 23344666888999888777777653
No 414
>PTZ00386 formyl tetrahydrofolate synthetase; Provisional
Probab=52.12 E-value=1.1e+02 Score=34.90 Aligned_cols=180 Identities=18% Similarity=0.206 Sum_probs=83.4
Q ss_pred CHHHHHHHHHHHh-cccccCCCCccccccCCCCChHHHHHHHHHHhcCCCccc-cccChhHH------HHHHHHHHHHHH
Q psy1785 197 SHAKLIDLMKTVI-QYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYT-YEVSPVFS------LMEEHVLAQMRT 268 (629)
Q Consensus 197 ~~~~il~~l~~~~-~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~-~~~~p~~~------~~E~~~~~~l~~ 268 (629)
+.+++.+.+.+++ .++ ..+.|-+..-+- ..+.+..+|..++.+|..+ .|..|++. -+-.-.-.-++.
T Consensus 274 dl~Dlr~Rlg~ivva~~-~~g~pVta~DL~----~~GAmt~LLkDAikPNLvQTlEgtPa~VHgGPFANIAhG~nSviAt 348 (625)
T PTZ00386 274 DLADMRQRLGAIVVAKS-KSGEPVTAEDLG----CAGAMTVLMKDTIEPTLMQTLEGTPVLVHAGPFGNIAHGNSSIVAD 348 (625)
T ss_pred CHHHHHHHHhceeeeec-CCCCceeHHHcC----chHHHHHHHHhhcccceeeecCCCceEEecCCcchhhcccHHHHHH
Confidence 5566666666554 333 334455544333 3445566777888887543 23333321 010101111111
Q ss_pred HhCCCCC---CeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecC
Q psy1785 269 IVGFQGG---DGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTD 345 (629)
Q Consensus 269 l~G~~~~---~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d 345 (629)
-+++.-+ +-++|-.|-.+-+ -+-..+--..+..|+ .|..+|+++.- ++.++-| |. +.+
T Consensus 349 ~~ALkla~~~dyvVTEAGFGaDl----GaEKF~dIkcR~sgl--~P~a~VlVaTv------RALK~hG-G~------~~~ 409 (625)
T PTZ00386 349 QIALKLAGQDGFVLTEAGFGADI----GCEKFFNIKCRTSGL--KPDAAVLVATV------RALKFHG-GV------EPV 409 (625)
T ss_pred HHHHHhCCCCCeEEEeccccCCC----CchhhccccccccCC--CcCEEEEEeeh------HHHHHhC-CC------Ccc
Confidence 1111111 3344433333222 221111112344565 47877776644 6777666 21 111
Q ss_pred CCCCCCHHHHH-------HHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHH-HcCC-eEEE
Q psy1785 346 ARGRMLPESLR-------GEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICA-EYDM-ADSV 403 (629)
Q Consensus 346 ~~g~~d~~~Le-------~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~-~~~~-~lhV 403 (629)
.-+.-|++.|+ +.|+..++ ...|..|..+.=.+. +-..++.|.+.|+ +.|+ ...+
T Consensus 410 ~l~~enl~al~~G~~NL~~Hien~~~-fgvpvVVAIN~F~tD--T~~Ei~~i~~~~~~~~ga~~~~~ 473 (625)
T PTZ00386 410 VAGKENLEAVRKGLSNLQRHIQNIRK-FGVPVVVALNKFSTD--TDAELELVKELALQEGGAADVVV 473 (625)
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHH-cCCCeEEEecCCCCC--CHHHHHHHHHHHHHhcCCccEEE
Confidence 22344555554 45555544 446655555443333 3346677888888 7773 4544
No 415
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=51.08 E-value=23 Score=36.87 Aligned_cols=59 Identities=15% Similarity=0.155 Sum_probs=44.7
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY 397 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~ 397 (629)
....|.+++|++|.+.|++.++...+.|-.-+++.++.|....-+.+.-.++.+.+.+.
T Consensus 12 a~vTPf~~dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 12 FPVTPFDADGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred eeeCCcCCCCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 34456788999999999999999999887767777777777777766666666655443
No 416
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=50.83 E-value=26 Score=36.16 Aligned_cols=59 Identities=12% Similarity=0.173 Sum_probs=44.6
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY 397 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~ 397 (629)
....|.+++|++|.+.+++.++...+.|-.-+++.++.|....-+.+.-.++.+.+.+.
T Consensus 5 a~~TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 5 ALITPFKEDGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred ceeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 45567889999999999999999988887777776777777666666666666655443
No 417
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=50.62 E-value=25 Score=36.43 Aligned_cols=64 Identities=16% Similarity=0.180 Sum_probs=45.6
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc---CCeEEE
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY---DMADSV 403 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~---~~~lhV 403 (629)
...|.|++|++|.+.+++.++...+.|-.-+++.++.|.....+.+.-.++.+.+.+. .+.+.+
T Consensus 8 ~vTPf~~dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 8 PVTHFDADGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred eecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 3456788999999999999999998886666676666666666666655665554443 355555
No 418
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=50.02 E-value=23 Score=36.36 Aligned_cols=64 Identities=14% Similarity=0.126 Sum_probs=45.3
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc---CCeEEE
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY---DMADSV 403 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~---~~~lhV 403 (629)
...|.+++|.+|.+.+++.++...+.|-.-+++.++.|....-+.+.-.++.+.+.+. .+.+.+
T Consensus 5 ~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~ 71 (281)
T cd00408 5 LVTPFTADGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA 71 (281)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 4567789999999999999999999886666666666666666666555666555443 344444
No 419
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=47.72 E-value=26 Score=36.61 Aligned_cols=64 Identities=14% Similarity=0.127 Sum_probs=45.1
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc---CCeEEE
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY---DMADSV 403 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~---~~~lhV 403 (629)
...|.+++|++|.+.|++.++...++|-.-+++.++.|....-+.+.-.++.+.+.+. .+.+.+
T Consensus 15 ~vTPf~~dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 15 PVTPFDADGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred eeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4446788999999999999999988887666676666666666666555555544442 245544
No 420
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=47.41 E-value=98 Score=29.37 Aligned_cols=71 Identities=14% Similarity=0.331 Sum_probs=51.7
Q ss_pred CCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHH
Q psy1785 311 PRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAI 390 (629)
Q Consensus 311 p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei 390 (629)
++..++......+.+.....++|+ ++...+.+ +.++++..|.+..++| +.+..|+. -.
T Consensus 78 ~~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-----~~~e~~~~i~~~~~~G-----~~viVGg~---------~~ 135 (176)
T PF06506_consen 78 PKIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-----SEEEIEAAIKQAKAEG-----VDVIVGGG---------VV 135 (176)
T ss_dssp SEEEEEEESS-SCCHHHHHHHHT----EEEEEEES-----SHHHHHHHHHHHHHTT-------EEEESH---------HH
T ss_pred CcEEEEecccccHHHHHHHHHhCC---ceEEEEEC-----CHHHHHHHHHHHHHcC-----CcEEECCH---------HH
Confidence 567777777777778899999999 99988875 5889999999999888 33333333 23
Q ss_pred HHHHHHcCCeEEE
Q psy1785 391 ADICAEYDMADSV 403 (629)
Q Consensus 391 ~~i~~~~~~~lhV 403 (629)
.++|+++|+..+.
T Consensus 136 ~~~A~~~gl~~v~ 148 (176)
T PF06506_consen 136 CRLARKLGLPGVL 148 (176)
T ss_dssp HHHHHHTTSEEEE
T ss_pred HHHHHHcCCcEEE
Confidence 6788999987654
No 421
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=46.78 E-value=29 Score=35.95 Aligned_cols=58 Identities=21% Similarity=0.315 Sum_probs=44.0
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHh-CCCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLA-EGAVPFMVSATSGTTVLGAFDPIPAIADICAE 396 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~-~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~ 396 (629)
...-|.+++|.+|.+.+++.++...+ .|-.-+++.++.|.....+.+.-.++.+.+.+
T Consensus 10 a~~TPf~~dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~ 68 (293)
T PRK04147 10 ALLTPFDEDGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAE 68 (293)
T ss_pred eeECcCCCCCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHH
Confidence 34456788999999999999999998 88776777777777777776666666665544
No 422
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=45.34 E-value=2.4e+02 Score=27.83 Aligned_cols=74 Identities=23% Similarity=0.297 Sum_probs=45.8
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE
Q psy1785 324 SIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 324 Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV 403 (629)
...+.|+.+|+ .++.++++.......+.|.+++...+++| ....| .|+... -++-..+-.+|++.|+..+.
T Consensus 47 ~~~~~A~~lgi---p~~~i~~~~~~~~~~~~l~~~l~~~~~~g-~~~vv---~G~i~s--d~~~~~~e~v~~~~gl~~~~ 117 (218)
T TIGR03679 47 LTRLQAEALGI---PLVKIETSGEKEKEVEDLKGALKELKREG-VEGIV---TGAIAS--RYQKSRIERICEELGLKVFA 117 (218)
T ss_pred HHHHHHHHhCC---CEEEEECCCCChHHHHHHHHHHHHHHHcC-CCEEE---ECCccc--HhHHHHHHHHHHhCCCeEEe
Confidence 45667888999 77888876333345566888888777665 22222 333332 12345556788888888766
Q ss_pred -ecC
Q psy1785 404 -TWN 406 (629)
Q Consensus 404 -A~g 406 (629)
-|+
T Consensus 118 PLw~ 121 (218)
T TIGR03679 118 PLWG 121 (218)
T ss_pred ehhc
Confidence 444
No 423
>PLN02417 dihydrodipicolinate synthase
Probab=45.16 E-value=33 Score=35.35 Aligned_cols=57 Identities=18% Similarity=0.183 Sum_probs=43.4
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE 396 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~ 396 (629)
...|.|++|.+|.+.+++.++...+.|-.-+++.++.|....-+.+.-.++.+.+.+
T Consensus 9 ~~TPf~~~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~ 65 (280)
T PLN02417 9 IKTPYLPDGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVN 65 (280)
T ss_pred eeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHH
Confidence 445678899999999999999999988776777777777777776665566555444
No 424
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=45.03 E-value=1.9e+02 Score=29.74 Aligned_cols=80 Identities=18% Similarity=0.148 Sum_probs=50.0
Q ss_pred CCCCHHHHHHHHHHHHhCC-CCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-----ecCccccccccccccccc
Q psy1785 348 GRMLPESLRGEIQRTLAEG-AVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-----TWNPHKLLTAPQQCSVFL 421 (629)
Q Consensus 348 g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-----A~gg~~l~~~~~~~~~~l 421 (629)
..+|+++.+..+......+ ..++.++. .|..|.++.-.+|+++.+++...+.| |++++.+..
T Consensus 70 ~~I~i~dse~v~raI~~~~~~~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIA--------- 137 (285)
T PF01972_consen 70 RYIDIDDSEFVLRAIREAPKDKPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIA--------- 137 (285)
T ss_pred eeEcHhhHHHHHHHHHhcCCCCceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHH---------
Confidence 3456666655555544332 23332222 35556666669999999998765544 666666543
Q ss_pred cccccccCCcceEEEeCCCCCCCCCCc
Q psy1785 422 TRRNYVIEVVADSVTWNPHKLLTAPQQ 448 (629)
Q Consensus 422 ~~~~~~i~~gaDsv~~~~HK~l~~P~~ 448 (629)
.+||-+..++|-.|| |..
T Consensus 138 --------LaADeIvM~p~a~LG-piD 155 (285)
T PF01972_consen 138 --------LAADEIVMGPGAVLG-PID 155 (285)
T ss_pred --------HhCCeEEECCCCccC-CCC
Confidence 269999999998877 443
No 425
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=44.88 E-value=32 Score=35.64 Aligned_cols=58 Identities=16% Similarity=0.246 Sum_probs=41.2
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhCC-CCcEEEEEeeCCCccccccCHHHHHHHHHH
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAEG-AVPFMVSATSGTTVLGAFDPIPAIADICAE 396 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~g-~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~ 396 (629)
...-|.+++|++|.+.+++.++...+.| -.-+++.++.|....-+.+.-.++.+.+.+
T Consensus 7 ~~~TPf~~dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~ 65 (290)
T TIGR00683 7 ALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKD 65 (290)
T ss_pred eeecCCCCCCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHH
Confidence 3445678899999999999999988888 555666666666666665555555554444
No 426
>cd00477 FTHFS Formyltetrahydrofolate synthetase (FTHFS) catalyzes the ATP-dependent activation of formate ion via its addition to the N10 position of tetrahydrofolate. FTHFS is a highly expressed key enzyme in both the Wood-Ljungdahl pathway of autotrophic CO2 fixation (acetogenesis) and the glycine synthase/reductase pathways of purinolysis. The key physiological role of this enzyme in acetogens is to catalyze the formylation of tetrahydrofolate, an initial step in the reduction of carbon dioxide and other one-carbon precursors to acetate. In purinolytic organisms, the enzymatic reaction is reversed, liberating formate from 10-formyltetrahydrofolate with concurrent production of ATP.
Probab=44.81 E-value=81 Score=35.22 Aligned_cols=181 Identities=18% Similarity=0.184 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCccc-cccChhHH------HHHHHHHHHHHHH
Q psy1785 197 SHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYT-YEVSPVFS------LMEEHVLAQMRTI 269 (629)
Q Consensus 197 ~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~-~~~~p~~~------~~E~~~~~~l~~l 269 (629)
+.+++.+.+.+++-.-...+.|-+..-+-. .+.+.-+|..++++|..+ -|..|++. -+-.-.-.-++.-
T Consensus 195 ~l~DLk~Rl~~ivv~~~~~g~PVta~DL~~----~GAmt~LLkdAikPNLvQTlEgtPa~vHgGPFANIAhGcnSviAtk 270 (524)
T cd00477 195 DLEDLKERLGRIVVAYSKDGEPVTAEDLGV----AGAMAVLLKDAIKPNLVQTLEGTPAFVHGGPFANIAHGCNSIIADK 270 (524)
T ss_pred CHHHHHHHHhCEEEEEcCCCCcEeHHHcCc----hHhHHHHHHhhhCccceeecCCCceEEecCCcccccccchHHHHHH
Confidence 566666666665432223345655544433 344566677888887643 23334321 0001001112222
Q ss_pred hCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCC-
Q psy1785 270 VGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARG- 348 (629)
Q Consensus 270 ~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g- 348 (629)
+++.-++-++|-.|-.+-+ -|-..+--..+..|+ .|..+|+++.- ++.++-|= . +.+.-+
T Consensus 271 ~al~laDyvVTEAGFGaDl----GaEKF~dIkcr~~gl--~P~a~VlVaTv------RALK~hGG-~------~~~~l~~ 331 (524)
T cd00477 271 IALKLADYVVTEAGFGADL----GAEKFFNIKCRYSGL--KPDAVVLVATV------RALKMHGG-V------PKVTLGL 331 (524)
T ss_pred HHHhhcCeEEeeccccCCC----CCceeeeeeeccCCC--CCCEEEEEEeh------HHHHHhCC-C------CcccCCC
Confidence 2222233344333322211 111111112344565 57877776644 67777662 1 111122
Q ss_pred CCCHH-------HHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE
Q psy1785 349 RMLPE-------SLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 349 ~~d~~-------~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV 403 (629)
.-|++ .|++.|+..++- ..|..|..+.=++. +-..++.+.+.|++.|+...+
T Consensus 332 ~en~~al~~G~~NL~~Hi~n~~~f-g~p~VVaiN~F~~D--t~~Ei~~v~~~~~~~g~~~~~ 390 (524)
T cd00477 332 EENLEALEKGFANLRKHIENIKKF-GVPVVVAINKFSTD--TDAELALVRKLAEEAGAFVAV 390 (524)
T ss_pred ccCHHHHHhHHHHHHHHHHHHHHc-CCCeEEEecCCCCC--CHHHHHHHHHHHHHcCCCEEE
Confidence 33444 455666666554 46766655544433 344678888999999988777
No 427
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=41.78 E-value=40 Score=34.86 Aligned_cols=58 Identities=24% Similarity=0.352 Sum_probs=41.6
Q ss_pred EEEEecCCCCCCCHHHHHHHHHHHHhC-CCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q psy1785 339 VYLIKTDARGRMLPESLRGEIQRTLAE-GAVPFMVSATSGTTVLGAFDPIPAIADICAE 396 (629)
Q Consensus 339 v~~V~~d~~g~~d~~~Le~~i~~~~~~-g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~ 396 (629)
....|.+++|.+|.+.+++.++...+. |-.-+++.++.|....-+.+.-.++.+.+.+
T Consensus 7 a~~TPf~~dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~ 65 (288)
T cd00954 7 ALLTPFDENGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAE 65 (288)
T ss_pred ceECCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHH
Confidence 344567889999999999999999998 8666666666666666665555555554444
No 428
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=41.71 E-value=4.6e+02 Score=28.93 Aligned_cols=68 Identities=12% Similarity=0.155 Sum_probs=42.1
Q ss_pred ecCCCCC-CCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcC-----CeEEEecCcccccc
Q psy1785 343 KTDARGR-MLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYD-----MADSVTWNPHKLLT 412 (629)
Q Consensus 343 ~~d~~g~-~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~-----~~lhVA~gg~~l~~ 412 (629)
|.++.|+ ++.+.|++.++-+ ++.+..++++-.+..++.+. .+...+..+..+.+ -.+|+.|+..+-++
T Consensus 209 P~NPtG~~~s~e~l~~l~~~~-~~~~i~lI~DEiYa~~~f~~-~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg 282 (447)
T PLN02607 209 PSNPLGATVQRSVLEDILDFV-VRKNIHLVSDEIYSGSVFSA-SEFVSVAEIVEARGYKGVAERVHIVYSLSKDLG 282 (447)
T ss_pred CCCCcCcccCHHHHHHHHHHH-HHCCCEEEEeccccccccCC-CCcccHHHHHhhcCCCCCcCcEEEEEcchhcCC
Confidence 5567785 6778887777655 44558888888887765543 13344555554432 35677666666543
No 429
>PRK13505 formate--tetrahydrofolate ligase; Provisional
Probab=41.49 E-value=1.1e+02 Score=34.75 Aligned_cols=180 Identities=20% Similarity=0.254 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHh-cccccCCCCccccccCCCCChHHHHHHHHHHhcCCCcccc-ccChhHH------HHHHHHHHHHHH
Q psy1785 197 SHAKLIDLMKTVI-QYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYTY-EVSPVFS------LMEEHVLAQMRT 268 (629)
Q Consensus 197 ~~~~il~~l~~~~-~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~~-~~~p~~~------~~E~~~~~~l~~ 268 (629)
+.+++.+.+.+++ .|+ ..+.|-+..-+- ..+.+.-+|-.++.+|..+. |..|++. -+-.-.-.-++.
T Consensus 212 ~l~Dl~~Rl~~ivv~~~-~~~~pvt~~dl~----~~GAm~~lLkdAi~PnLvQTle~tPa~vHgGPFANIAhG~nSviAt 286 (557)
T PRK13505 212 DLKDLKERLGRIVVGYT-YDGKPVTVKDLK----VEGAMALLLKDAIKPNLVQTLEGTPAFVHGGPFANIAHGCNSVLAT 286 (557)
T ss_pred CHHHHHHHHhCEEEEEc-CCCCceeHHHcC----chHHHHHHHHhhcccceeeecCCCceEEecCCcchhhcccHHHHHH
Confidence 5566666665553 333 234455544333 34455667778888876432 3333321 010111111222
Q ss_pred HhCCCCCCeEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCC
Q psy1785 269 IVGFQGGDGIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARG 348 (629)
Q Consensus 269 l~G~~~~~g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g 348 (629)
-+++.-++-++|-.|-.+-+ -|-..+--..+..|+ .|..+|+++.. ++.++-| |. +.++-.
T Consensus 287 ~~al~ladyvvTEaGFGaDl----GaEKF~dIkcr~~gl--~P~~~VlVaTv------raLK~hg-g~------~~~~l~ 347 (557)
T PRK13505 287 KTALKLADYVVTEAGFGADL----GAEKFLDIKCRKAGL--KPDAVVIVATV------RALKMHG-GV------AKDDLK 347 (557)
T ss_pred HHHHhhCCEEEecccccCCC----CCceeeeeecccCCC--CCCEEEEEeeh------HHHHHcC-CC------Chhhcc
Confidence 22222233344333322221 111111112345565 47877776644 6666665 21 111112
Q ss_pred CCCH-------HHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE
Q psy1785 349 RMLP-------ESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV 403 (629)
Q Consensus 349 ~~d~-------~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV 403 (629)
.-|+ .+|++.|+..+. ...|..|..+--.+.+- ..++.|.+.|++.|+.+.+
T Consensus 348 ~en~Eal~sGl~NL~RHIenvr~-FGvPvVVAINKFd~DTe--~Ei~~I~~~c~e~Gv~va~ 406 (557)
T PRK13505 348 EENVEALKKGFANLERHIENIRK-FGVPVVVAINKFVTDTD--AEIAALKELCEELGVEVAL 406 (557)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEeCCCCCCH--HHHHHHHHHHHHcCCCEEE
Confidence 3344 345556665544 45777776665443332 1457788889888887766
No 430
>KOG1411|consensus
Probab=38.99 E-value=88 Score=33.16 Aligned_cols=86 Identities=15% Similarity=0.217 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCcEEEcc--CCCceEEEEEeeCCCCCCCCchhhHHHHHhhHHHHHHHHHHhcCcEE
Q psy1785 511 GLEAHIDKSFDNAKYFTDKIRHRPGFKLVLD--EPECTNISFWYIPPSLRGKEDQADFNELLHKVAPKIKERMMKSGSMM 588 (629)
Q Consensus 511 G~~~~~~~~~~la~~l~~~L~~~~g~~l~~~--~p~~~~v~F~~~p~~~~~~~~~~~~~~~l~~~~~~i~~~l~~~G~~~ 588 (629)
-++-+++|.+.+.+.|.+.|++. |-..-.+ ..+.+.+||.-. +++-.+.|.++-.++
T Consensus 337 evk~MadRi~~mR~~L~d~L~~~-gs~~~W~hI~~QIGMF~fTgl--------------------~peQv~~l~ke~~iY 395 (427)
T KOG1411|consen 337 EVKGMADRIISMRQQLFDALEKE-GSPGNWSHITKQIGMFCFTGL--------------------NPEQVDWLTKEYHIY 395 (427)
T ss_pred HHHHHHHhhhhhHHHHhHHhhcC-CCCccHHHHHHhhheeeecCC--------------------CHHHHHHHHhhheee
Confidence 34567788888999999999875 4322110 146788898631 134567777777666
Q ss_pred EeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHhh
Q psy1785 589 ITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLGH 627 (629)
Q Consensus 589 i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~~ 627 (629)
++. + -|+++. ..+..-+++|.++|....+
T Consensus 396 mT~---d-----GRiS~a--G~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 396 LTK---D-----GRISMA--GLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred ecc---C-----ceEeec--cccccCCcccchhhHhHhc
Confidence 542 2 277873 5566678888888876643
No 431
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=38.26 E-value=1e+02 Score=29.92 Aligned_cols=55 Identities=9% Similarity=0.019 Sum_probs=43.2
Q ss_pred HHHHHHHHHHH-h-CCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-ecCc
Q psy1785 353 ESLRGEIQRTL-A-EGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-TWNP 407 (629)
Q Consensus 353 ~~Le~~i~~~~-~-~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A~gg 407 (629)
++|..+++... + +....++|..|=|.+..|.++|+..-++++++.|+.+|. +.|.
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIgiG~ 152 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIFIGS 152 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEEecC
Confidence 66777776654 2 223568899999999899999988778999999999998 7765
No 432
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=37.67 E-value=1.1e+02 Score=28.83 Aligned_cols=82 Identities=11% Similarity=0.155 Sum_probs=44.9
Q ss_pred CeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCC----CCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCH
Q psy1785 312 RLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARG----RMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPI 387 (629)
Q Consensus 312 ~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g----~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl 387 (629)
-.+-+..+.........++-.|+ +++.++..... .++.+.+.++++...+..+.|++|.+..|...+|.+
T Consensus 35 TII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v--- 108 (164)
T PF03162_consen 35 TIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV--- 108 (164)
T ss_dssp EEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH---
T ss_pred eEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH---
Confidence 33444444445566667788898 88888886543 477888888887666666679999999999999983
Q ss_pred HHHHHHHHHcCCeEE
Q psy1785 388 PAIADICAEYDMADS 402 (629)
Q Consensus 388 ~ei~~i~~~~~~~lh 402 (629)
....|+..-|-.
T Consensus 109 ---vg~lRk~Q~W~~ 120 (164)
T PF03162_consen 109 ---VGCLRKLQGWSL 120 (164)
T ss_dssp ---HHHHHHHTTB-H
T ss_pred ---HHHHHHHcCCCH
Confidence 444445555643
No 433
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=35.83 E-value=38 Score=34.94 Aligned_cols=64 Identities=14% Similarity=0.145 Sum_probs=43.5
Q ss_pred EEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc---CCeEEE
Q psy1785 340 YLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY---DMADSV 403 (629)
Q Consensus 340 ~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~---~~~lhV 403 (629)
..-|.+++|.+|.+.+++.++...+.|-.-+++.++.|....-+.+.-.++.+++.++ ++.+.+
T Consensus 9 ~~TPf~~dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 9 LITPFNADGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp E---BETTSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred eeCCCCCCcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 3446678999999999999999999887767776676767777766666666665553 345555
No 434
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=34.10 E-value=3.2e+02 Score=23.84 Aligned_cols=74 Identities=14% Similarity=0.179 Sum_probs=43.7
Q ss_pred CCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecC--CCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHH
Q psy1785 311 PRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTD--ARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIP 388 (629)
Q Consensus 311 p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d--~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ 388 (629)
....|++...+.......+ |+++.+|.. .+..+|++.+.+.+.+ +| +++.+++....+.+ .
T Consensus 27 ~tv~v~s~~d~~s~~~~~a-------d~~~~~~~~~~~~~yl~~e~I~~ia~~---~g-----~~~i~pGyg~lse~--~ 89 (110)
T PF00289_consen 27 ETVAVNSNPDTVSTHVDMA-------DEAYFEPPGPSPESYLNIEAIIDIARK---EG-----ADAIHPGYGFLSEN--A 89 (110)
T ss_dssp EEEEEEEGGGTTGHHHHHS-------SEEEEEESSSGGGTTTSHHHHHHHHHH---TT-----ESEEESTSSTTTTH--H
T ss_pred cceeccCchhccccccccc-------ccceecCcchhhhhhccHHHHhhHhhh---hc-----CcccccccchhHHH--H
Confidence 3445555555533332222 377777722 2345788766665554 33 77778776555555 7
Q ss_pred HHHHHHHHcCCeE
Q psy1785 389 AIADICAEYDMAD 401 (629)
Q Consensus 389 ei~~i~~~~~~~l 401 (629)
++++.|++.|+-+
T Consensus 90 ~fa~~~~~~gi~f 102 (110)
T PF00289_consen 90 EFAEACEDAGIIF 102 (110)
T ss_dssp HHHHHHHHTT-EE
T ss_pred HHHHHHHHCCCEE
Confidence 8888888888754
No 435
>PRK10638 glutaredoxin 3; Provisional
Probab=33.73 E-value=2.5e+02 Score=22.61 Aligned_cols=69 Identities=20% Similarity=0.328 Sum_probs=41.8
Q ss_pred CeEEEEcCCcchH--HHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHH
Q psy1785 312 RLVLYTSEDAHYS--IKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPA 389 (629)
Q Consensus 312 ~~vv~~s~~~H~S--i~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~e 389 (629)
+.++|+...+.+| +.+...-.|+ ....++++.+. +..+.+.+.......|.+++ ++...|-+|++.+
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi---~y~~~dv~~~~-----~~~~~l~~~~g~~~vP~i~~---~g~~igG~~~~~~ 71 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGV---SFQEIPIDGDA-----AKREEMIKRSGRTTVPQIFI---DAQHIGGCDDLYA 71 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCC---CcEEEECCCCH-----HHHHHHHHHhCCCCcCEEEE---CCEEEeCHHHHHH
Confidence 5678888888887 4456667788 77778776532 22344444444445675432 5666677666655
Q ss_pred HH
Q psy1785 390 IA 391 (629)
Q Consensus 390 i~ 391 (629)
+.
T Consensus 72 ~~ 73 (83)
T PRK10638 72 LD 73 (83)
T ss_pred HH
Confidence 43
No 436
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=32.50 E-value=75 Score=32.70 Aligned_cols=56 Identities=11% Similarity=0.167 Sum_probs=43.2
Q ss_pred EEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHc
Q psy1785 341 LIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEY 397 (629)
Q Consensus 341 ~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~ 397 (629)
.-|.++ |.+|.+.+++.++...+.|-.-+++.++.|.....+.+.-.++.+.+.+.
T Consensus 9 ~TPf~~-g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~ 64 (279)
T cd00953 9 ITPFTG-NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDI 64 (279)
T ss_pred ecCcCC-CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHH
Confidence 456777 99999999999999999887777777777777777776666666655443
No 437
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=32.44 E-value=6.9e+02 Score=27.24 Aligned_cols=204 Identities=14% Similarity=0.165 Sum_probs=91.7
Q ss_pred CCCCCCCHHHHHHHHHHHhc-ccccCCCCccccccCCCCChHHHHHHHHHHhcCCCc-cccccChhHHHHHHHHHHHHHH
Q psy1785 191 FNAGPSSHAKLIDLMKTVIQ-YSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSV-YTYEVSPVFSLMEEHVLAQMRT 268 (629)
Q Consensus 191 lp~~~~~~~~il~~l~~~~~-~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~-~~~~~~p~~~~~E~~~~~~l~~ 268 (629)
....+.....+++.+.+... +..+.+.+.+..-. -....+.-+.+.++..+|... ..--..+.++.. +..++.
T Consensus 28 ~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~-~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a----ln~va~ 102 (405)
T COG0520 28 NAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAE-EATDLYEAAREAVARFLNADSSDEIVFTRGTTEA----LNLVAR 102 (405)
T ss_pred CcccccCCHHHHHHHHHHHHhhcCCcCcccchHHH-HHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhHH----HHHHHH
Confidence 33344456677777666543 22222111111000 001123334555666777553 222234555433 444555
Q ss_pred HhC--CCCCC-eEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEE-cCCcchHHHHHHHHcCCCCCCEEEEec
Q psy1785 269 IVG--FQGGD-GIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYT-SEDAHYSIKKLAAFEGLGSDNVYLIKT 344 (629)
Q Consensus 269 l~G--~~~~~-g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~-s~~~H~Si~kaa~~lGlg~~~v~~V~~ 344 (629)
.++ +..++ .+++.--=.+|........++ .|. +++++- ....-.........+. +..+++.|..
T Consensus 103 ~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~-------~Ga----~v~~i~~~~~g~~~~~~~~~~i~-~~Tklvais~ 170 (405)
T COG0520 103 GLGRSLKPGDEIVVSDLEHHSNIVPWQELAKR-------TGA----KVRVIPLDDDGLLDLDALEKLIT-PKTKLVALSH 170 (405)
T ss_pred HhhhhhcCCCEEEEccCcchhhHHHHHHHHHh-------cCc----EEEEEecCCCCCcCHHHHHHhcC-CCceEEEEEC
Confidence 554 44443 444443334665554444333 232 222221 1222222233333222 2224555554
Q ss_pred --CCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEEecCcccccccccccccccc
Q psy1785 345 --DARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSVTWNPHKLLTAPQQCSVFLT 422 (629)
Q Consensus 345 --d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhVA~gg~~l~~~~~~~~~~l~ 422 (629)
+-.|... ++++..+.+++.| .+++|+++++--. .-+| + ++.++ +.+++++|+|+.-|..++.+.-
T Consensus 171 vSn~tG~~~--pv~~I~~la~~~g-a~v~VDaaq~~~h-~~id-v-------~~l~~-Df~afsgHKwl~gP~GiGvLy~ 237 (405)
T COG0520 171 VSNVTGTVN--PVKEIAELAHEHG-ALVLVDAAQAAGH-LPID-V-------QELGC-DFLAFSGHKWLLGPTGIGVLYV 237 (405)
T ss_pred ccccccccc--hHHHHHHHHHHcC-CEEEEECccccCc-cCCC-c-------hhcCC-CEEEEcccccccCCCceEEEEE
Confidence 2345443 3444444444444 7888888764332 2322 1 22232 3348999998888888886543
Q ss_pred cc
Q psy1785 423 RR 424 (629)
Q Consensus 423 ~~ 424 (629)
.+
T Consensus 238 r~ 239 (405)
T COG0520 238 RK 239 (405)
T ss_pred ch
Confidence 33
No 438
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=32.16 E-value=63 Score=33.85 Aligned_cols=50 Identities=14% Similarity=0.143 Sum_probs=39.7
Q ss_pred CCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHH
Q psy1785 347 RGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAE 396 (629)
Q Consensus 347 ~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~ 396 (629)
+|++|.+.|++.++...+.|-.-++|.++.|.....+.+.-.++.+.+.+
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~ 72 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVE 72 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHH
Confidence 48999999999999999988777777777777777777766666665544
No 439
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=31.87 E-value=82 Score=33.18 Aligned_cols=19 Identities=11% Similarity=0.144 Sum_probs=15.5
Q ss_pred cCHHHHHHHHHHcCCeEEE
Q psy1785 385 DPIPAIADICAEYDMADSV 403 (629)
Q Consensus 385 dpl~ei~~i~~~~~~~lhV 403 (629)
.||.+..++|++.|+++++
T Consensus 63 ~dl~~f~~~a~~~gl~vil 81 (319)
T PF01301_consen 63 RDLDRFLDLAQENGLYVIL 81 (319)
T ss_dssp G-HHHHHHHHHHTT-EEEE
T ss_pred hhHHHHHHHHHHcCcEEEe
Confidence 5899999999999999877
No 440
>PRK13506 formate--tetrahydrofolate ligase; Provisional
Probab=31.36 E-value=4.2e+02 Score=30.16 Aligned_cols=89 Identities=8% Similarity=-0.026 Sum_probs=45.3
Q ss_pred HhcCCCCCCCeEEEEcCCcchHHHHHHHHcCCCCCCEEE-EecCC-CCCCCHHHHH-------HHHHHHHhCCCCcEEEE
Q psy1785 303 KTQGLASCPRLVLYTSEDAHYSIKKLAAFEGLGSDNVYL-IKTDA-RGRMLPESLR-------GEIQRTLAEGAVPFMVS 373 (629)
Q Consensus 303 ~~~G~~~~p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~-V~~d~-~g~~d~~~Le-------~~i~~~~~~g~~~~~Vv 373 (629)
+..|+ .|..+|++..- ++.++-|=+. .+.. -|..+ -..-+++.|+ +.|+..++ ...|..|.
T Consensus 330 r~~gl--~P~a~VlVaTv------RALK~hGG~~-~~~~g~pl~~~l~~en~~al~~G~~NL~~Hi~n~~~-fg~pvVVa 399 (578)
T PRK13506 330 RQSGK--APDCAVLVATL------RALKANSGLY-DLRPGQALPDSINAPDQARLEAGFANLKWHINNVAQ-YGLPVVVA 399 (578)
T ss_pred ccCCC--CCceEEEEEEe------ehHHhcCCCC-CcccCcccchhccccCHHHHHHHHHHHHHHHHHHHH-cCCCeEEE
Confidence 44565 57777766644 5666665111 1100 01111 1234455544 45655544 44666555
Q ss_pred EeeCCCccccccCHHHHHHHHHH-cCCeEEE
Q psy1785 374 ATSGTTVLGAFDPIPAIADICAE-YDMADSV 403 (629)
Q Consensus 374 at~Gtt~~G~idpl~ei~~i~~~-~~~~lhV 403 (629)
.+.=++. +-..++.|.+.|++ .++...+
T Consensus 400 iN~F~~D--t~~Ei~~~~~~~~~~~~~~~~~ 428 (578)
T PRK13506 400 INRFPTD--TDEELEWLKEAVLLTGAFGCEI 428 (578)
T ss_pred ecCCCCC--CHHHHHHHHHHHHHcCCCcEEE
Confidence 5443333 33467778888888 5666655
No 441
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=31.27 E-value=3.1e+02 Score=27.28 Aligned_cols=102 Identities=20% Similarity=0.204 Sum_probs=61.5
Q ss_pred eEEeCCchhhHHHHHHHHHHhhchhHHhcCCCCCCCeEEEEcCCc-----ch----HHHHHHHHcCCCCCCEEEEecCCC
Q psy1785 277 GIFCPGGSMANGYAISCARHHAFPQIKTQGLASCPRLVLYTSEDA-----HY----SIKKLAAFEGLGSDNVYLIKTDAR 347 (629)
Q Consensus 277 g~~~~GgT~an~~al~~ar~~~~~~~~~~G~~~~p~~vv~~s~~~-----H~----Si~kaa~~lGlg~~~v~~V~~d~~ 347 (629)
..+.+||-++++ |+..|.+. |+. .+.++++.+... |. .....|+.+|+ .++...++..
T Consensus 4 ~aL~SGGKDS~~-Al~~a~~~--------G~e-V~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi---~l~~~~~~g~ 70 (223)
T COG2102 4 IALYSGGKDSFY-ALYLALEE--------GHE-VVYLLTVKPENGDSYMFHTPNLELAELQAEAMGI---PLVTFDTSGE 70 (223)
T ss_pred EEEEecCcHHHH-HHHHHHHc--------CCe-eEEEEEEecCCCCeeeeeccchHHHHHHHHhcCC---ceEEEecCcc
Confidence 467899999965 44444332 331 234444444433 32 24456778888 7888887665
Q ss_pred CCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccc---cCHHHHHHHHHHcCCeEEE
Q psy1785 348 GRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAF---DPIPAIADICAEYDMADSV 403 (629)
Q Consensus 348 g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~i---dpl~ei~~i~~~~~~~lhV 403 (629)
..-.+++|.+++.... +.+. +.|+| +-...+-.+|++.|+-..-
T Consensus 71 ~e~eve~L~~~l~~l~--------~d~i----v~GaI~s~yqk~rve~lc~~lGl~~~~ 117 (223)
T COG2102 71 EEREVEELKEALRRLK--------VDGI----VAGAIASEYQKERVERLCEELGLKVYA 117 (223)
T ss_pred chhhHHHHHHHHHhCc--------ccEE----EEchhhhHHHHHHHHHHHHHhCCEEee
Confidence 5567788888887743 1111 12333 4456777899999887644
No 442
>PLN02759 Formate--tetrahydrofolate ligase
Probab=28.94 E-value=2.4e+02 Score=32.23 Aligned_cols=48 Identities=21% Similarity=0.307 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHhcccccCCCCccccccCCCCChHHHHHHHHHHhcCCCccc
Q psy1785 197 SHAKLIDLMKTVIQYSVKTGHPYFVNQLFSSVDPYGLVGQWLADALNPSVYT 248 (629)
Q Consensus 197 ~~~~il~~l~~~~~~~~~~~~p~~~g~~~s~~~~~~~~~~~lt~~~n~~~~~ 248 (629)
+.+++.+.+.+++-.....+.|-+..-+- ..+.+.-+|-.++++|..+
T Consensus 279 dl~Dlk~Rlg~ivvg~~~~g~pVta~DL~----~~GAmt~LLkDAikPNLvQ 326 (637)
T PLN02759 279 SLADMRERLGKMVIGNSKAGEPVTADDLG----VGGALTVLMKDAIHPTLMQ 326 (637)
T ss_pred CHHHHHHHHhCEEEEEcCCCCceeHHHcC----chHhHHHHHHhhhCcccee
Confidence 56666666665532222334455544333 3445566777888887643
No 443
>PRK11633 cell division protein DedD; Provisional
Probab=28.20 E-value=2.1e+02 Score=28.62 Aligned_cols=48 Identities=15% Similarity=0.268 Sum_probs=36.3
Q ss_pred HHHHHHHHhcCcE-EEee-eecCCccceEEEeecCCCCCHHHHHHHHHHHHHH
Q psy1785 575 PKIKERMMKSGSM-MITY-QPIHALPNFFRLVLQNSALDHSDMDYFIDEIERL 625 (629)
Q Consensus 575 ~~i~~~l~~~G~~-~i~~-~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l 625 (629)
..++.+|...|.- ++.. ...+| .+.|+-++ ++.++++.+..+..|+++
T Consensus 164 ~~l~~kL~~~G~~Ay~~~~~~~~G--~~tRV~VG-P~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 164 NEIVAKLRLSGYRVYTVPSTPVQG--KITRIYVG-PDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHCCCeeEEEeeecCCC--cEEEEEeC-CCCCHHHHHHHHHHHHHh
Confidence 4788999999953 2211 12233 47899997 999999999999999986
No 444
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=26.22 E-value=6.4e+02 Score=26.42 Aligned_cols=30 Identities=7% Similarity=0.158 Sum_probs=22.4
Q ss_pred hhHHHHHHHHHhhcccccCCcccccccccc
Q psy1785 143 HGKLIDLMKTVIQYSVKTGHPYFVNQLFSS 172 (629)
Q Consensus 143 ~~~ll~~~~~~l~y~v~t~hP~F~~~l~s~ 172 (629)
.+++++.+..++..+++.+.+|++..+...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 31 (373)
T TIGR03812 2 EEEVLEELKEYRSEDLKYSDGRILGSMCTN 31 (373)
T ss_pred HHHHHHHHHHHHhcCCCCCCCcEEEEEeCC
Confidence 467788888877888888777877666654
No 445
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=26.00 E-value=1.1e+02 Score=29.24 Aligned_cols=75 Identities=17% Similarity=0.211 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-----ecCcccccccccccccccccccc
Q psy1785 352 PESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMADSV-----TWNPHKLLTAPQQCSVFLTRRNY 426 (629)
Q Consensus 352 ~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-----A~gg~~l~~~~~~~~~~l~~~~~ 426 (629)
.+.|++.|++..+++...+.+.. .|.-|.++...+|.+..+.....+.+ |.+++.++.-
T Consensus 15 ~~~l~~~l~~a~~~~~~~ivl~i---nspGG~v~~~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~------------- 78 (178)
T cd07021 15 AAFVERALKEAKEEGADAVVLDI---DTPGGRVDSALEIVDLILNSPIPTIAYVNDRAASAGALIAL------------- 78 (178)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEE---ECcCCCHHHHHHHHHHHHhCCCCEEEEECCchHHHHHHHHH-------------
Confidence 34577888777776533332322 56668888889999999988877666 4444444321
Q ss_pred ccCCcceEEEeCCCCCCCCC
Q psy1785 427 VIEVVADSVTWNPHKLLTAP 446 (629)
Q Consensus 427 ~i~~gaDsv~~~~HK~l~~P 446 (629)
.+|.+...++=.+|.+
T Consensus 79 ----a~d~i~m~p~a~iG~~ 94 (178)
T cd07021 79 ----AADEIYMAPGATIGAA 94 (178)
T ss_pred ----hCCeEEECCCCeEecC
Confidence 3788888888666654
No 446
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=25.05 E-value=8.8e+02 Score=26.68 Aligned_cols=81 Identities=22% Similarity=0.282 Sum_probs=51.6
Q ss_pred eEEEEcCCcchHHH-HHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEee--------CCCcccc
Q psy1785 313 LVLYTSEDAHYSIK-KLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATS--------GTTVLGA 383 (629)
Q Consensus 313 ~vv~~s~~~H~Si~-kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~--------Gtt~~G~ 383 (629)
.++|+|+..-..-. -=|..+|+..+++...+ ..+++++.+.|++. .|-+|+.-. -++..|+
T Consensus 122 ~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-----Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~SapGs 191 (456)
T COG1066 122 KVLYVSGEESLQQIKLRADRLGLPTNNLYLLA-----ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITSAPGS 191 (456)
T ss_pred cEEEEeCCcCHHHHHHHHHHhCCCccceEEeh-----hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccCCCCc
Confidence 47888887755433 34678888777777776 56777777777662 354444332 2344466
Q ss_pred ccCHH----HHHHHHHHcCCeEEE
Q psy1785 384 FDPIP----AIADICAEYDMADSV 403 (629)
Q Consensus 384 idpl~----ei~~i~~~~~~~lhV 403 (629)
+.-++ ++.+++|+.|+++.+
T Consensus 192 VsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 192 VSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEE
Confidence 54444 455689999998755
No 447
>PRK10927 essential cell division protein FtsN; Provisional
Probab=24.53 E-value=1.8e+02 Score=30.41 Aligned_cols=46 Identities=13% Similarity=0.280 Sum_probs=36.2
Q ss_pred HHHHHHHHhcCc-EEEeeeecCCccceEEEeecCCCCCHHHHHHHHHHHHHHh
Q psy1785 575 PKIKERMMKSGS-MMITYQPIHALPNFFRLVLQNSALDHSDMDYFIDEIERLG 626 (629)
Q Consensus 575 ~~i~~~l~~~G~-~~i~~~~~~~~~~~lR~~~~n~~~t~edid~l~~~i~~l~ 626 (629)
..++.+|...|. ..+ ...+ .+.|+.++ |+.++++++...+.|+..+
T Consensus 262 E~LrAkLa~~G~~A~I---~~~g--~~~RVrVG-Pf~sr~eAe~a~~rLk~aG 308 (319)
T PRK10927 262 ETVRAQLAFEGFDSKI---TTNN--GWNRVVIG-PVKGKENADSTLNRLKMAG 308 (319)
T ss_pred HHHHHHHHHcCCeeEE---ccCC--cEEEEEeC-CCCCHHHHHHHHHHHHHCC
Confidence 467889999994 233 2222 48999997 9999999999999998865
No 448
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=24.26 E-value=2.8e+02 Score=26.14 Aligned_cols=57 Identities=23% Similarity=0.264 Sum_probs=42.2
Q ss_pred CCCCHHHHHHHHHHHHhCCCCcEEEEEee-CCCc------------cccccCHHHHHHHHHHcCCeEEEe
Q psy1785 348 GRMLPESLRGEIQRTLAEGAVPFMVSATS-GTTV------------LGAFDPIPAIADICAEYDMADSVT 404 (629)
Q Consensus 348 g~~d~~~Le~~i~~~~~~g~~~~~Vvat~-Gtt~------------~G~idpl~ei~~i~~~~~~~lhVA 404 (629)
..++.++.++.+...++.|-..+.+.-+. +... .+..|+|..+.+.|+++|+-++|.
T Consensus 15 ~~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 15 QNWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 46788888888888888887665444432 2221 245589999999999999999993
No 449
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=23.95 E-value=1e+03 Score=27.11 Aligned_cols=50 Identities=16% Similarity=0.147 Sum_probs=38.3
Q ss_pred CCeEEEEcCCcchHHHHHHHHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCC
Q psy1785 311 PRLVLYTSEDAHYSIKKLAAFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAV 368 (629)
Q Consensus 311 p~~vv~~s~~~H~Si~kaa~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~ 368 (629)
++..|+.-...-..+...+.++++ ++..+.. -+.++.+.+|.+.+++|..
T Consensus 108 ~~iavv~~~~~~~~~~~~~~~l~~---~i~~~~~-----~~~~e~~~~v~~lk~~G~~ 157 (538)
T PRK15424 108 SSIGVVTYQETIPALVAFQKTFNL---RIEQRSY-----VTEEDARGQINELKANGIE 157 (538)
T ss_pred CcEEEEecCcccHHHHHHHHHhCC---ceEEEEe-----cCHHHHHHHHHHHHHCCCC
Confidence 466777777777788888999998 7666654 3567888999999998843
No 450
>TIGR00884 guaA_Cterm GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit. This protein of purine de novo biosynthesis is well-conserved. However, it appears to split into two separate polypeptide chains in most of the Archaea. This C-terminal region would be the larger subunit
Probab=23.35 E-value=8.7e+02 Score=25.41 Aligned_cols=35 Identities=26% Similarity=0.234 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhCCCCCCeEEeCCchhhHHHHHHHHH
Q psy1785 260 EHVLAQMRTIVGFQGGDGIFCPGGSMANGYAISCAR 295 (629)
Q Consensus 260 ~~~~~~l~~l~G~~~~~g~~~~GgT~an~~al~~ar 295 (629)
.+.++++.+.++- ..-.+..|||-+|...+..+.+
T Consensus 4 ~~~~~~l~~~v~~-~kVvValSGGVDSsvla~ll~~ 38 (311)
T TIGR00884 4 EEAVEEIREQVGD-AKVIIALSGGVDSSVAAVLAHR 38 (311)
T ss_pred HHHHHHHHHHhCC-CcEEEEecCChHHHHHHHHHHH
Confidence 4556677777764 3456778999999776655443
No 451
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=23.00 E-value=1.2e+02 Score=26.03 Aligned_cols=52 Identities=17% Similarity=0.021 Sum_probs=32.9
Q ss_pred EEEEeeCCCccccccCHHHHHHHHHHcCCeEEE-ecCccccccccccccccccccccccCCcceEEEeCCC
Q psy1785 371 MVSATSGTTVLGAFDPIPAIADICAEYDMADSV-TWNPHKLLTAPQQCSVFLTRRNYVIEVVADSVTWNPH 440 (629)
Q Consensus 371 ~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~lhV-A~gg~~l~~~~~~~~~~l~~~~~~i~~gaDsv~~~~H 440 (629)
+++++.|-|.+-. .+++.+.|+++|+...+ +.+-...... ++. +|.+...||
T Consensus 4 ll~C~~GaSSs~l---a~km~~~a~~~gi~~~i~a~~~~e~~~~--------------~~~-~Dvill~PQ 56 (99)
T cd05565 4 LVLCAGGGTSGLL---ANALNKGAKERGVPLEAAAGAYGSHYDM--------------IPD-YDLVILAPQ 56 (99)
T ss_pred EEECCCCCCHHHH---HHHHHHHHHHCCCcEEEEEeeHHHHHHh--------------ccC-CCEEEEcCh
Confidence 4555555444444 28889999999998877 5544332211 344 788887777
No 452
>PF06620 DUF1150: Protein of unknown function (DUF1150); InterPro: IPR009531 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=22.63 E-value=2.9e+02 Score=22.58 Aligned_cols=65 Identities=15% Similarity=0.219 Sum_probs=48.1
Q ss_pred HHcCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhCCCCcEEEEEeeCCCccccccCHHHHHHHHHHcCCe
Q psy1785 330 AFEGLGSDNVYLIKTDARGRMLPESLRGEIQRTLAEGAVPFMVSATSGTTVLGAFDPIPAIADICAEYDMA 400 (629)
Q Consensus 330 ~~lGlg~~~v~~V~~d~~g~~d~~~Le~~i~~~~~~g~~~~~Vvat~Gtt~~G~idpl~ei~~i~~~~~~~ 400 (629)
.+..+|..+|.+|+ .|+.++|.+.+...... ...++.+-.+-++-....|+-+.....++++++-
T Consensus 7 ~fa~lg~~~iaYVR-----~v~~~dl~~~~~~~~~~-~~~l~Avh~AdG~~lal~~dR~~Af~~A~q~dl~ 71 (76)
T PF06620_consen 7 DFAALGEGRIAYVR-----PVRVDDLPEEFPPQIDP-GETLYAVHAADGTPLALVDDRDAAFAAARQHDLE 71 (76)
T ss_pred HHHhcCCCcEEEEE-----EechHHhhhhcccccCC-CceEEEEecCCCCEEEEECCHHHHHHHHHHcCCe
Confidence 34456667999998 67888888888744443 4666777777788888889888888888888763
No 453
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=21.20 E-value=3.1e+02 Score=28.81 Aligned_cols=84 Identities=13% Similarity=0.148 Sum_probs=53.7
Q ss_pred CCCHHHHHHHHHHHHhCCC-CcEEE-EEeeCCCccccccCHHHHHHHHHHc---C-CeEEE---ecCccccccccccccc
Q psy1785 349 RMLPESLRGEIQRTLAEGA-VPFMV-SATSGTTVLGAFDPIPAIADICAEY---D-MADSV---TWNPHKLLTAPQQCSV 419 (629)
Q Consensus 349 ~~d~~~Le~~i~~~~~~g~-~~~~V-vat~Gtt~~G~idpl~ei~~i~~~~---~-~~lhV---A~gg~~l~~~~~~~~~ 419 (629)
.++.+.+++.+++...... ..+.+ +=+=|+++.++ ..|++..+++ + ++..| |.+|+.|+.-
T Consensus 79 ~~~~~~~~~~l~~~~~~~~vk~vvL~inSPGG~v~as----~~i~~~l~~l~~~~PV~v~v~~~AASGGY~IA~------ 148 (317)
T COG0616 79 FIGGDDIEEILRAARADPSVKAVVLRINSPGGSVVAS----ELIARALKRLRAKKPVVVSVGGYAASGGYYIAL------ 148 (317)
T ss_pred cccHHHHHHHHHHHhcCCCCceEEEEEECcCCchhHH----HHHHHHHHHHhhcCCEEEEECCeecchhhhhhc------
Confidence 5678888888888776553 33333 33347777777 6666554443 2 45555 6666666543
Q ss_pred cccccccccCCcceEEEeCCCCCCCCCCccEEEEEec
Q psy1785 420 FLTRRNYVIEVVADSVTWNPHKLLTAPQQCSVFLTRH 456 (629)
Q Consensus 420 ~l~~~~~~i~~gaDsv~~~~HK~l~~P~~~g~ll~r~ 456 (629)
.||-+..+++=..| | .|++....
T Consensus 149 -----------aAd~I~a~p~si~G-S--IGVi~~~~ 171 (317)
T COG0616 149 -----------AADKIVADPSSITG-S--IGVISGAP 171 (317)
T ss_pred -----------cCCEEEecCCceee-e--ceeEEecC
Confidence 49999999996665 4 56776643
No 454
>COG0722 AroG 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism]
Probab=21.20 E-value=8.9e+02 Score=25.55 Aligned_cols=35 Identities=11% Similarity=0.153 Sum_probs=27.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCc-EEEEEeeCCCcccc
Q psy1785 349 RMLPESLRGEIQRTLAEGAVP-FMVSATSGTTVLGA 383 (629)
Q Consensus 349 ~~d~~~Le~~i~~~~~~g~~~-~~Vvat~Gtt~~G~ 383 (629)
..|.+.++++.+...+.|..| ++|+++++++..=-
T Consensus 241 NYda~~v~~~~~~l~~~gl~~~lmID~SH~NS~K~~ 276 (351)
T COG0722 241 NYDAASVAAACEQLEKAGLPPRLMIDCSHANSGKDY 276 (351)
T ss_pred CCCHHHHHHHHHHHHHcCCCCeEEEeccCCccccCh
Confidence 478899999998888888766 57888888876544
Done!