Query psy17854
Match_columns 181
No_of_seqs 171 out of 1273
Neff 8.0
Searched_HMMs 46136
Date Sat Aug 17 00:45:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17854.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17854hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00014 myosin-A; Provisional 100.0 1.2E-49 2.6E-54 362.9 10.2 172 9-180 96-295 (821)
2 COG5022 Myosin heavy chain [Cy 100.0 1.2E-49 2.6E-54 367.7 5.5 172 9-180 66-266 (1463)
3 cd01377 MYSc_type_II Myosin mo 100.0 1.9E-48 4.2E-53 351.5 8.5 172 9-180 5-211 (693)
4 cd01385 MYSc_type_IX Myosin mo 100.0 5.3E-48 1.2E-52 348.3 9.8 173 8-180 6-207 (692)
5 cd01386 MYSc_type_XVIII Myosin 100.0 8.1E-48 1.8E-52 349.5 9.7 170 11-180 2-198 (767)
6 cd01381 MYSc_type_VII Myosin m 100.0 5.6E-48 1.2E-52 347.2 8.0 170 11-180 2-196 (671)
7 cd01380 MYSc_type_V Myosin mot 100.0 6.9E-48 1.5E-52 347.8 8.0 169 12-180 3-202 (691)
8 cd01383 MYSc_type_VIII Myosin 100.0 2E-47 4.4E-52 343.6 8.8 173 8-180 7-201 (677)
9 cd01382 MYSc_type_VI Myosin mo 100.0 3.3E-47 7.2E-52 344.3 9.0 174 7-180 2-201 (717)
10 cd01379 MYSc_type_III Myosin m 100.0 3.3E-47 7.2E-52 341.1 8.1 171 10-180 1-197 (653)
11 cd01384 MYSc_type_XI Myosin mo 100.0 6E-47 1.3E-51 340.5 9.6 172 9-180 1-202 (674)
12 cd01378 MYSc_type_I Myosin mot 100.0 9.7E-47 2.1E-51 339.6 8.3 170 11-180 2-199 (674)
13 cd01387 MYSc_type_XV Myosin mo 100.0 2.7E-46 5.9E-51 336.6 8.8 170 10-180 2-197 (677)
14 cd00124 MYSc Myosin motor doma 100.0 1.2E-45 2.6E-50 333.7 9.0 170 11-180 2-197 (679)
15 smart00242 MYSc Myosin. Large 100.0 3E-45 6.5E-50 330.6 10.3 173 8-180 5-205 (677)
16 PF00063 Myosin_head: Myosin h 100.0 8.7E-45 1.9E-49 329.3 6.9 169 12-180 2-200 (689)
17 KOG0164|consensus 100.0 2.2E-44 4.7E-49 314.4 3.8 170 11-180 10-209 (1001)
18 KOG0161|consensus 100.0 5.5E-44 1.2E-48 341.6 4.6 173 9-181 82-286 (1930)
19 KOG0162|consensus 100.0 1E-43 2.2E-48 310.7 4.3 170 10-180 19-217 (1106)
20 KOG0163|consensus 100.0 8.2E-42 1.8E-46 299.6 0.8 175 7-181 55-255 (1259)
21 KOG0160|consensus 100.0 8.3E-40 1.8E-44 295.2 4.0 171 10-180 9-206 (862)
22 KOG4229|consensus 100.0 3.9E-32 8.4E-37 250.6 0.9 172 8-180 60-259 (1062)
23 PTZ00014 myosin-A; Provisional 99.2 4.9E-12 1.1E-16 116.7 0.5 150 27-177 556-714 (821)
24 cd01381 MYSc_type_VII Myosin m 99.2 5.2E-12 1.1E-16 114.7 -0.1 160 16-176 437-614 (671)
25 cd01380 MYSc_type_V Myosin mot 99.1 1.1E-11 2.3E-16 113.1 -0.7 160 16-176 442-636 (691)
26 cd01384 MYSc_type_XI Myosin mo 99.0 3.1E-11 6.7E-16 109.7 0.1 148 27-176 461-617 (674)
27 KOG0161|consensus 99.0 5.8E-11 1.2E-15 116.1 1.1 151 25-175 540-711 (1930)
28 cd01385 MYSc_type_IX Myosin mo 99.0 3.4E-11 7.3E-16 109.8 -1.6 160 16-177 452-637 (692)
29 cd01378 MYSc_type_I Myosin mot 99.0 6.7E-11 1.5E-15 107.6 -0.3 148 27-176 462-617 (674)
30 COG5022 Myosin heavy chain [Cy 99.0 7.7E-11 1.7E-15 111.4 -0.2 164 15-179 503-686 (1463)
31 smart00242 MYSc Myosin. Large 99.0 1.2E-10 2.7E-15 106.1 0.1 149 27-176 463-620 (677)
32 cd01387 MYSc_type_XV Myosin mo 98.9 1.4E-10 2.9E-15 105.7 -0.2 147 27-175 455-621 (677)
33 cd00124 MYSc Myosin motor doma 98.9 1.8E-10 3.9E-15 105.1 -0.1 150 26-176 455-624 (679)
34 cd01377 MYSc_type_II Myosin mo 98.9 4.1E-10 8.8E-15 102.9 0.3 151 26-176 468-637 (693)
35 cd01382 MYSc_type_VI Myosin mo 98.9 3.8E-10 8.3E-15 103.3 -0.3 125 51-175 523-661 (717)
36 cd01383 MYSc_type_VIII Myosin 98.8 2.8E-10 6.1E-15 103.6 -1.9 146 26-176 458-623 (677)
37 cd01386 MYSc_type_XVIII Myosin 98.7 3.2E-09 7E-14 97.8 1.0 161 15-176 468-706 (767)
38 cd01379 MYSc_type_III Myosin m 98.7 5.7E-09 1.2E-13 94.8 1.2 126 27-175 467-599 (653)
39 PF00063 Myosin_head: Myosin h 98.5 1.7E-08 3.7E-13 92.4 -1.1 152 25-176 457-641 (689)
40 KOG0164|consensus 98.3 1.2E-07 2.7E-12 84.9 -0.8 124 51-174 499-632 (1001)
41 KOG0162|consensus 97.9 3.2E-06 7E-11 76.2 1.6 117 51-174 501-632 (1106)
42 KOG0160|consensus 97.9 1.1E-05 2.3E-10 74.8 3.6 150 26-177 460-618 (862)
43 KOG0163|consensus 97.2 7.6E-05 1.6E-09 67.9 -0.6 89 52-140 578-672 (1259)
44 KOG4229|consensus 96.2 0.0027 5.9E-08 60.6 2.1 71 27-98 521-591 (1062)
45 cd01363 Motor_domain Myosin an 87.2 1.2 2.7E-05 34.1 4.6 39 108-146 58-97 (186)
46 PF08248 Tryp_FSAP: Tryptophyl 25.8 45 0.00097 13.9 0.9 9 43-51 2-10 (12)
47 PF02526 GBP_repeat: Glycophor 22.2 53 0.0011 18.2 1.0 11 170-180 22-32 (38)
No 1
>PTZ00014 myosin-A; Provisional
Probab=100.00 E-value=1.2e-49 Score=362.93 Aligned_cols=172 Identities=27% Similarity=0.448 Sum_probs=151.2
Q ss_pred CCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc----------ccccCCCccchhhhhHHH
Q psy17854 9 TQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG----------LKTAIEPVDYSAEKWLMK 71 (181)
Q Consensus 9 ~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~----------i~h~agph~Y~va~~~~k 71 (181)
+.++||+.|+.|||++||.++ +.||++|++||+||||+.+|+|.. ....++||+|++|+.+|+
T Consensus 96 ~~~~Dl~~L~~lnE~~vL~nL~~Ry~~~~IYTy~G~iLIavNPyk~l~~y~~~~~~~Y~~~~~~~~lpPHifavA~~Ay~ 175 (821)
T PTZ00014 96 MTYGDIGLLPHTNIPCVLDFLKHRYLKNQIYTTADPLLVAINPFKDLGNTTNDWIRRYRDAKDSDKLPPHVFTTARRALE 175 (821)
T ss_pred CCcchhhhCCCCCHHHHHHHHHHHHcCCCCeeeECCEEEEECCCCCCCCCcHHHHHHHhCCCCcCCCCCCHHHHHHHHHH
Confidence 468999999999999999988 788899999999999999997653 123579999999999999
Q ss_pred hcCCCccchhhhhhc-cC-------Ccccccccc---ccchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEe
Q psy17854 72 NMDPLNENVVSLLQV-SQ-------DPFVAHIWK---DAEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINF 140 (181)
Q Consensus 72 n~d~~~~~~~~ll~~-S~-------~~~l~~l~~---~~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f 140 (181)
+|....++|++++++ |+ +.+++.+.. ......+++++.++||||||||||||.+|+||||||||++++|
T Consensus 176 ~m~~~~~~QsIiiSGESGAGKTe~tK~im~yla~~~~~~~~~~ie~~Il~sNpiLEAFGNAKT~rNdNSSRFGKfi~i~F 255 (821)
T PTZ00014 176 NLHGVKKSQTIIVSGESGAGKTEATKQIMRYFASSKSGNMDLKIQNAIMAANPVLEAFGNAKTIRNNNSSRFGRFMQLQL 255 (821)
T ss_pred HHHhcCCCceEEEEcCCCCCchHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHhhccCcCCCCCcCcceeEEEEEE
Confidence 999999999988854 22 234443322 2223578999999999999999999999999999999999999
Q ss_pred cCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 141 DASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 141 ~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
+..|.|.||+|.+||||||||+.|++||||||||||||+|
T Consensus 256 ~~~g~i~Ga~I~~YLLEKSRVv~q~~gERNfHIFYqLl~G 295 (821)
T PTZ00014 256 GEEGGIRYGSIVAFLLEKSRVVTQEDDERSYHIFYQLLKG 295 (821)
T ss_pred cCCCcEeeEEEEEEeccCceeeecCCCCCCEeHHHHHHhC
Confidence 9999999999999999999999999999999999999998
No 2
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=100.00 E-value=1.2e-49 Score=367.65 Aligned_cols=172 Identities=41% Similarity=0.638 Sum_probs=152.6
Q ss_pred CCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc--ccc-------cCCCccchhhhhHHHh
Q psy17854 9 TQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG--LKT-------AIEPVDYSAEKWLMKN 72 (181)
Q Consensus 9 ~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~--i~h-------~agph~Y~va~~~~kn 72 (181)
+.-+|||.|++|+||+|+.++ ..|||+|-+||+||||..+|+|.+ +++ ..+||+|++|+.+|++
T Consensus 66 ~~vdDLt~LSyLNEpsVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~iYt~d~i~~Y~~K~r~el~PHvfAIAe~aY~~ 145 (1463)
T COG5022 66 DGVDDLTELSYLNEPAVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLGIYTDDIIQSYSGKNRLELEPHVFAIAEEAYRN 145 (1463)
T ss_pred cCchhhhhhhccCcHHHHHHHHHHhhcCceeEEeeeEEEEecCcccCCCccHHHHHHhccCccccCCchHHHHHHHHHHH
Confidence 556899999999999999887 788999999999999999997765 333 3589999999999999
Q ss_pred cCCCccchhhhhhc-cC-------C---cccccccccc--chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEE
Q psy17854 73 MDPLNENVVSLLQV-SQ-------D---PFVAHIWKDA--EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRIN 139 (181)
Q Consensus 73 ~d~~~~~~~~ll~~-S~-------~---~~l~~l~~~~--~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~ 139 (181)
|...+++|++++++ |+ + .|++.+.... ....++++|++.||||||||||+|++|+||||||||+++.
T Consensus 146 lls~~eNQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEAFGNAkTvRNdNSSRFGKyikI~ 225 (1463)
T COG5022 146 LLSEKENQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEAFGNAKTVRNDNSSRFGKYIKIE 225 (1463)
T ss_pred HHhcCCCceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHHhccccccccCCcccccceEEEE
Confidence 99999999998864 32 2 3444443322 3468899999999999999999999999999999999999
Q ss_pred ecCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 140 FDASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 140 f~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|+..|.|+||+|.+|||||||||.|+.+||||||||||++|
T Consensus 226 Fd~~g~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G 266 (1463)
T COG5022 226 FDENGEICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAG 266 (1463)
T ss_pred ECCCCceechhhhhhhhhhhhhccCCCCccchhhhhhHhcC
Confidence 99999999999999999999999999999999999999998
No 3
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=100.00 E-value=1.9e-48 Score=351.46 Aligned_cols=172 Identities=41% Similarity=0.581 Sum_probs=150.6
Q ss_pred CCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHh
Q psy17854 9 TQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKN 72 (181)
Q Consensus 9 ~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn 72 (181)
+..+||+.|+.|||++||.++ +.||++|++||+||||+++|+|.. ....++||+|++|+.+|++
T Consensus 5 ~~v~Dl~~L~~l~E~~il~~L~~Ry~~~~iYT~~G~iLIavNP~k~l~ly~~~~~~~Y~~~~~~~~~PHiyaiA~~Ay~~ 84 (693)
T cd01377 5 DKVEDMAELTHLNEASVLHNLRERYYSDLIYTYSGLFCVAVNPYKRLPIYTEEVVEMYRGKKREEMPPHIFAIADNAYRS 84 (693)
T ss_pred cCcchhhhCCcCCHHHHHHHHHHHHhcCCcEEeecceeEeecCCccCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHH
Confidence 678999999999999999888 788899999999999999996653 1235799999999999999
Q ss_pred cCCCccchhhhhhc-cC-------Ccccccc---cccc--------chhhHHHHhhhhhhHHHhhccccccccCCCCcce
Q psy17854 73 MDPLNENVVSLLQV-SQ-------DPFVAHI---WKDA--------EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFG 133 (181)
Q Consensus 73 ~d~~~~~~~~ll~~-S~-------~~~l~~l---~~~~--------~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg 133 (181)
|.....+|++++++ |+ +.++.++ .... ....+++++.+++|||||||||||.+|+||||||
T Consensus 85 m~~~~~~QsIiiSGESGAGKTes~K~il~yLa~~~~~~~~~~~~~~~~~~i~~~il~snpiLEAFGNAkT~rN~NSSRFG 164 (693)
T cd01377 85 MLQDRENQSILITGESGAGKTENTKKVIQYLASVAASSKKKKQSGKGQGTLEDQILQANPILEAFGNAKTVRNDNSSRFG 164 (693)
T ss_pred HHhcCCCceEEEEcCCCCCchHHHHHHHHHHHhhcCCCCcccccccccccHHHHHHHHHHHHHHhhccccCCCCCccccc
Confidence 99989999888753 22 2334433 2221 2246889999999999999999999999999999
Q ss_pred eEEEEEecCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 134 KFIRINFDASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 134 ~~~~l~f~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
||++++|+..|+|.||+|.+||||||||+.|+.||||||||||||+|
T Consensus 165 K~i~l~f~~~g~i~Ga~i~~yLLEksRVv~q~~gERNfHIFYqLl~G 211 (693)
T cd01377 165 KFIRIHFGNTGKIAGADIETYLLEKSRVVFQASGERNYHIFYQLLSG 211 (693)
T ss_pred eeEEEEECCCCCEEEEEEEEEecccCceeecCCCCCcHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999998
No 4
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=100.00 E-value=5.3e-48 Score=348.34 Aligned_cols=173 Identities=33% Similarity=0.495 Sum_probs=151.9
Q ss_pred cCCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc----------ccccCCCccchhhhhHH
Q psy17854 8 DTQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG----------LKTAIEPVDYSAEKWLM 70 (181)
Q Consensus 8 ~~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~----------i~h~agph~Y~va~~~~ 70 (181)
|.+++||+.|+.|+|++||.++ +.||++|++||+||||+++|+|.. ....++||+|++|+.||
T Consensus 6 ~~~~~Dl~~L~~lnE~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~y~~~~~~~Y~~~~~~~~lpPHiy~iA~~Ay 85 (692)
T cd01385 6 QREYDDLCNLPELTEGTLLKNLRHRFLQGHIYTYAGSILVAVNPFKFLPIYNPKYVRLYENQQRLGKLPPHIFAIADVAY 85 (692)
T ss_pred cCCCChhhhCCCCCHHHHHHHHHHHHhcCCCeEeECCEEEEECCCcCCCCCCHHHHHHHhcCCCcCCCCCCHHHHHHHHH
Confidence 5789999999999999999888 788899999999999999997543 13457999999999999
Q ss_pred HhcCCCccchhhhhhc-c--C-----Cccccccccc----cchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEE
Q psy17854 71 KNMDPLNENVVSLLQV-S--Q-----DPFVAHIWKD----AEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRI 138 (181)
Q Consensus 71 kn~d~~~~~~~~ll~~-S--~-----~~~l~~l~~~----~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l 138 (181)
++|.....+|++++++ | + +.++.++..- .....+++++.+++|||||||||+|.+|+||||||||+++
T Consensus 86 ~~m~~~~~~QsIiisGESGAGKTet~K~il~yL~~~s~~~~~~~~i~~~i~~snpiLEAFGNAkT~~N~NSSRFGK~i~l 165 (692)
T cd01385 86 YNMLRKKVNQCIVISGESGSGKTESTNFLIHHLTALSQKGYAGSGVEQTILSAGPVLEAFGNAKTAHNNNSSRFGKFIQV 165 (692)
T ss_pred HHHHhcCCCceEEEecCCCCCchHHHHHHHHHHHHhccCCccCCcHHHHHHHHHHHHHHhhccccCCCCCccccceeEEE
Confidence 9999988999988753 2 2 2344444321 1235689999999999999999999999999999999999
Q ss_pred EecCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 139 NFDASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 139 ~f~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
+|+..|.|.||+|.+||||||||+.|++||||||||||||+|
T Consensus 166 ~F~~~g~i~Ga~i~~yLLEksRV~~q~~gERNfHIFYqll~G 207 (692)
T cd01385 166 NYRENGMVRGAVVEKYLLEKSRIVSQEKDERNYHVFYYLLLG 207 (692)
T ss_pred EECCCCCEEEEEEEEeecccceeeecCCCCchhHHHHHHHcC
Confidence 999999999999999999999999999999999999999998
No 5
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=100.00 E-value=8.1e-48 Score=349.51 Aligned_cols=170 Identities=25% Similarity=0.348 Sum_probs=146.8
Q ss_pred cCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCcccc---------cccCCCccchhhhhHHHhcC
Q psy17854 11 FGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKGL---------KTAIEPVDYSAEKWLMKNMD 74 (181)
Q Consensus 11 ~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~i---------~h~agph~Y~va~~~~kn~d 74 (181)
.+||+.|+.|||++||.++ +.||++|++||++|||+.+|+|... ...++||+|++|+.||++|.
T Consensus 2 v~Dl~~L~~l~E~~il~~L~~Ry~~~~IYT~~G~iLIavNPyk~l~iY~~~~~~~y~~~~~~~~pPHifaiA~~Ay~~m~ 81 (767)
T cd01386 2 VEDLASLVYLNESSVLHTLRQRYAANLIHTCAGPDLLVLNPMAPLALYSEKVPSMFRGCKAEDMPPHIYSLAQTAYRALL 81 (767)
T ss_pred cchhhcCCCCCHHHHHHHHHHHHcCCCCeEeECCeEEEECCCCCCCCCCHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHH
Confidence 3799999999999999988 7888999999999999999976542 13579999999999999999
Q ss_pred CCccchhhhhhc-cC-------Cccccccccc---cchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC
Q psy17854 75 PLNENVVSLLQV-SQ-------DPFVAHIWKD---AEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS 143 (181)
Q Consensus 75 ~~~~~~~~ll~~-S~-------~~~l~~l~~~---~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~ 143 (181)
....+|++++++ |+ +.+++++... .......+++.+++|||||||||+|.+|+||||||||++|+|+..
T Consensus 82 ~~~~~QsIiiSGESGAGKTe~tK~i~~yla~~~~~~~~~~~~e~i~~~npiLEAFGNAkT~rNdNSSRFGK~i~l~F~~~ 161 (767)
T cd01386 82 ETRRDQSIIFLGRSGAGKTTSCKHALEYLALAAGSVDGRVSVEKVRALFTILEAFGNVSTALNGNATRFTQILSLDFDQT 161 (767)
T ss_pred HcCCCceEEEecCCCCCcHHHHHHHHHHHHhccCCCCcccHHHHHHhhchHHHHhhccCcCCCCCcCcceeEEEEEECCC
Confidence 888999888853 22 2344444321 112223468999999999999999999999999999999999999
Q ss_pred CcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 144 GYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 144 ~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|.+.||+|.+||||||||+.|+.||||||||||||+|
T Consensus 162 g~i~Ga~i~~yLLEKSRVv~q~~gERNFHIFYqLlaG 198 (767)
T cd01386 162 GQIASASLQTMLLERSRVARRPNGETNFVVFSQLLAG 198 (767)
T ss_pred CcEeEEEEEEEecccCceeecCCCCCcchhHHHHHhC
Confidence 9999999999999999999999999999999999998
No 6
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=100.00 E-value=5.6e-48 Score=347.22 Aligned_cols=170 Identities=39% Similarity=0.564 Sum_probs=149.5
Q ss_pred cCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHhcC
Q psy17854 11 FGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKNMD 74 (181)
Q Consensus 11 ~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn~d 74 (181)
.+||+.|+.|||++||.++ +.||++|++||+||||+++|+|.. ....++||+|++|+.||++|.
T Consensus 2 v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~~y~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m~ 81 (671)
T cd01381 2 VEDMITLGDLHEAGILRNLLIRYKKKLIYTYTGSILVAVNPYQILPIYTADEIKLYKNKSIGELPPHIFAISDNAYTNMQ 81 (671)
T ss_pred cchhhhCCCCCHHHHHHHHHHHHccCCCeEeeCCEEEEeCCCccCCCCCHHHHHHHhcCCccccCCCHHHHHHHHHHHHH
Confidence 4799999999999999988 788899999999999999997654 124579999999999999999
Q ss_pred CCccchhhhhhc-c--C-----Cccccccccc-cchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCCCc
Q psy17854 75 PLNENVVSLLQV-S--Q-----DPFVAHIWKD-AEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASGY 145 (181)
Q Consensus 75 ~~~~~~~~ll~~-S--~-----~~~l~~l~~~-~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~~~ 145 (181)
....+|++++++ | + +.++.++..- .....+++++.+++|||||||||+|.+|+||||||||++++|++.|+
T Consensus 82 ~~~~~QsIiisGESGaGKTes~K~i~~yLa~~s~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~~~l~F~~~g~ 161 (671)
T cd01381 82 REKKNQCIIISGESGAGKTESTKLILQYLAAISGKHSWIEQQILEANPILEAFGNAKTIRNDNSSRFGKYIDIHFNKRGA 161 (671)
T ss_pred HcCCCceEEEEcCCCCCeehHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhhccccCCCCCccccceeEEEEECCCCc
Confidence 999999988853 2 2 2344443332 22356889999999999999999999999999999999999999999
Q ss_pred ccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 146 IAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 146 ~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|.||+|.+||||||||+.|++||||||||||||+|
T Consensus 162 i~Ga~i~~yLLEksRV~~q~~gERnfHIFYqLl~g 196 (671)
T cd01381 162 IEGAKIEQYLLEKSRIVRQARDERNYHIFYCMLAG 196 (671)
T ss_pred EEEEEEEEEeccCCceeecCCCCCcHHHHHHHHcC
Confidence 99999999999999999999999999999999998
No 7
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=100.00 E-value=6.9e-48 Score=347.81 Aligned_cols=169 Identities=37% Similarity=0.541 Sum_probs=148.2
Q ss_pred CccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHhcCC
Q psy17854 12 GARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKNMDP 75 (181)
Q Consensus 12 ~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn~d~ 75 (181)
+||+.|+.|||++||.++ +.||++|++||+||||+.+|+|.. ....++||+|++|+.+|++|..
T Consensus 3 ~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~Y~~~~~~~y~~~~~~~~~PHifaiA~~Ay~~m~~ 82 (691)
T cd01380 3 DDLTNLSYLHEPAVLHNLRVRFIQKQIYTYSGIVLVAINPYARLPIYGEEIIQAYSGQRKGELDPHIFAIAEEAYKQMTR 82 (691)
T ss_pred hhhhhCCCCCHHHHHHHHHHHHcCCCCEEeECCEEEEeCCCCCCCcCCHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 699999999999999988 788899999999999999997542 1245799999999999999999
Q ss_pred Cccchhhhhhc-cC-------Cccccccc---ccc----chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEe
Q psy17854 76 LNENVVSLLQV-SQ-------DPFVAHIW---KDA----EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINF 140 (181)
Q Consensus 76 ~~~~~~~ll~~-S~-------~~~l~~l~---~~~----~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f 140 (181)
...+|++++++ |+ +.++.++. ... ....+++++.+++|||||||||+|.+|+||||||||++++|
T Consensus 83 ~~~~QsIiiSGESGaGKTes~K~i~~yLa~~~~~~~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~~~l~f 162 (691)
T cd01380 83 DEKNQSIIVSGESGAGKTVSAKYIMRYFASVGGSDSREVSETQVEEKVLASNPIMEAFGNAKTTRNDNSSRFGKYIQILF 162 (691)
T ss_pred cCCCceEEEEcCCCCCchHHHHHHHHHHHHhcCCCcccccccCHHHHHHHHHHHHHHhhcCCCCCCCCccccceEEEEEE
Confidence 99999988754 22 23344332 211 23578999999999999999999999999999999999999
Q ss_pred cCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 141 DASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 141 ~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
+..|+|.||+|.+||||||||+.|++||||||||||||+|
T Consensus 163 ~~~g~i~Ga~i~~yLLEksRv~~~~~gErnfHIFYqLl~g 202 (691)
T cd01380 163 DKRGRIIGANMRTYLLEKSRVVFQAPGERNYHIFYQLCAG 202 (691)
T ss_pred CCCCCEEEEEEEEeeccccceeecCCCCChhHHHHHHHhC
Confidence 9999999999999999999999999999999999999998
No 8
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=100.00 E-value=2e-47 Score=343.65 Aligned_cols=173 Identities=36% Similarity=0.489 Sum_probs=151.9
Q ss_pred cCCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc-------ccccCCCccchhhhhHHHhc
Q psy17854 8 DTQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG-------LKTAIEPVDYSAEKWLMKNM 73 (181)
Q Consensus 8 ~~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~-------i~h~agph~Y~va~~~~kn~ 73 (181)
-+..+||+.|+.|||++||.++ +.||++|++||+||||+.+|+|.. -....+||+|++|+.+|++|
T Consensus 7 ~~~v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~ly~~~~~~~y~~~~~~~PHifaiA~~Ay~~m 86 (677)
T cd01383 7 LDGVDDLMQLSYLNEPSVLYNLQYRYSQDLIYTKAGPVLVAVNPFKEVPLYGNDYIEAYRKKSNDSPHVYAIADTAYNEM 86 (677)
T ss_pred ccCcchhhhCCCCCHHHHHHHHHHHHcCCCCeEEECCEEEEEcCCcCCCCCCHHHHHHhhCCCCCCCCHHHHHHHHHHHH
Confidence 3788999999999999999988 788899999999999999996543 12346899999999999999
Q ss_pred CCCccchhhhhhc-c--C-----CccccccccccchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCCCc
Q psy17854 74 DPLNENVVSLLQV-S--Q-----DPFVAHIWKDAEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASGY 145 (181)
Q Consensus 74 d~~~~~~~~ll~~-S--~-----~~~l~~l~~~~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~~~ 145 (181)
.....+|++++++ | + +.++.++..-+....+++++.+++|||||||||+|.+|+||||||||++++|+..|+
T Consensus 87 ~~~~~~QsIiisGESGaGKTe~~K~i~~yLa~~~~~~~i~~~il~snpiLEaFGNAkT~~N~NSSRFGK~~~l~f~~~g~ 166 (677)
T cd01383 87 MRDEVNQSIIISGESGAGKTETAKIAMQYLASLGGGSGIEYEILQTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGK 166 (677)
T ss_pred HHcCCCceEEEecCCCCCcchHHHHHHHHHHhhCCCCcHHHHHHHHHHHHHHhhccccCCCCCcCccceeEEEEECCCCc
Confidence 9888899888753 2 2 234444443333347889999999999999999999999999999999999999999
Q ss_pred ccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 146 IAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 146 ~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
+.||+|.+|||||+||+.|+.||||||||||||+|
T Consensus 167 i~ga~i~~yLLEksRv~~q~~gErNfHIFYqLl~g 201 (677)
T cd01383 167 ISGAKIQTFLLEKSRVVQCARGERSYHIFYQLCAG 201 (677)
T ss_pred EEEEEEEEEecCCCceeccCCCCchhHHHHHHHcC
Confidence 99999999999999999999999999999999998
No 9
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=100.00 E-value=3.3e-47 Score=344.28 Aligned_cols=174 Identities=29% Similarity=0.456 Sum_probs=152.1
Q ss_pred CcCCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCC-Cccc---------ccccCCCccchhhhhH
Q psy17854 7 SDTQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVP-VLKG---------LKTAIEPVDYSAEKWL 69 (181)
Q Consensus 7 ~~~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p-~~f~---------i~h~agph~Y~va~~~ 69 (181)
|+.+.+||+.|+.|||++||.++ +.||++|++||+||||+++| +|.. ....++||+|++|+.+
T Consensus 2 ~~~~v~Dl~~L~~lnE~~vL~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~~lY~~~~~~~y~~~~~~~~~PHifaiA~~A 81 (717)
T cd01382 2 SKKDVEDNCSLMYLNEATLLNNIRVRYSKDKIYTYVANILIAVNPYFDIPKLYSSDTIKKYQGKSLGTLPPHVFAIADKA 81 (717)
T ss_pred CCCCcchhhcCCCCCHHHHHHHHHHHHcCCCCEEeECCEEEEECCCCcccccCCHHHHHHhhCCCcCcCCCcHHHHHHHH
Confidence 57889999999999999999988 78889999999999999998 4432 1235799999999999
Q ss_pred HHhcCCCccchhhhhhc-c--C-----Ccccccccccc-chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEe
Q psy17854 70 MKNMDPLNENVVSLLQV-S--Q-----DPFVAHIWKDA-EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINF 140 (181)
Q Consensus 70 ~kn~d~~~~~~~~ll~~-S--~-----~~~l~~l~~~~-~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f 140 (181)
|++|.....+|++++++ | + +.++.++.... ....+++++.+++|||||||||+|.+|+|||||||+++|+|
T Consensus 82 y~~m~~~~~~QsIiisGESGaGKTes~K~il~yLa~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~~~l~f 161 (717)
T cd01382 82 YRDMKVLKMSQSIIVSGESGAGKTENTKFVLRYLTESYGSGQDIDDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHF 161 (717)
T ss_pred HHHHHhcCCCCeEEEecCCCCChhHHHHHHHHHHHhhccCCccHHHHHHHHHHHHHHhhccccCCCCCcccceeEEEEEE
Confidence 99999989999888754 2 2 23444444322 23578899999999999999999999999999999999999
Q ss_pred cCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 141 DASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 141 ~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
+..|+|.||+|.+|||||+||+.++.||||||||||||+|
T Consensus 162 ~~~g~i~Ga~i~~yLLEksRVv~~~~gErNfHIFYqLl~G 201 (717)
T cd01382 162 NEKNSVVGGFVSHYLLEKSRICVQSAEERNYHIFYRLCAG 201 (717)
T ss_pred CCCCCEeEEEEEEEeccCCceEecCCCCCchHHHHHHHhC
Confidence 9999999999999999999999999999999999999998
No 10
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=100.00 E-value=3.3e-47 Score=341.11 Aligned_cols=171 Identities=31% Similarity=0.483 Sum_probs=149.3
Q ss_pred CcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCcccc---------cccCCCccchhhhhHHHhc
Q psy17854 10 QFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKGL---------KTAIEPVDYSAEKWLMKNM 73 (181)
Q Consensus 10 ~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~i---------~h~agph~Y~va~~~~kn~ 73 (181)
|.+||+.|+.|+|++||.++ +.||++|++||+||||+++|+|... ....+||+|++|+.+|++|
T Consensus 1 ~~~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~ly~~~~~~~y~~~~~~~~~PHifavA~~Ay~~m 80 (653)
T cd01379 1 DMDDLATLEVLDEDTIVEQLQKRYETNQIYTYVGDILIAVNPFQQLGLYTTQHSRLYTGQKRSSNPPHIFAIADAAYQSL 80 (653)
T ss_pred CcchhhcCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCCHHHHHhhcCCCCCCCCCcHHHHHHHHHHHH
Confidence 46899999999999999988 7888999999999999999976441 2346999999999999999
Q ss_pred CCCccchhhhhhc---cCC-----cccccccc--ccchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC
Q psy17854 74 DPLNENVVSLLQV---SQD-----PFVAHIWK--DAEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS 143 (181)
Q Consensus 74 d~~~~~~~~ll~~---S~~-----~~l~~l~~--~~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~ 143 (181)
.....+|++++++ |++ .+++++.. ......+++++.+++|||||||||+|.+|+||||||||++++|+++
T Consensus 81 ~~~~~~QsIiisGESGsGKTet~K~l~~yL~~~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRFGK~i~l~f~~~ 160 (653)
T cd01379 81 VTYNQDQCIVISGESGSGKTESAHLLVQQLTVLGKANNRTLQEKILQVNSLVEAFGNARTGINDNSSRFGKYLEMKFTRS 160 (653)
T ss_pred HhcCCCceEEEecCCCCCchHHHHHHHHHHHHhcCCCCccHHHHHHHHHHHHHHhhccCcCCCCCcccceeEEEEEECCC
Confidence 9888899887743 222 34444422 2233568899999999999999999999999999999999999999
Q ss_pred CcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 144 GYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 144 ~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|+|.||+|.+||||||||+.|++||||||||||||+|
T Consensus 161 g~i~Ga~i~~yLLEksRVv~q~~gERNfHIFYqLl~G 197 (653)
T cd01379 161 GAVVGARISEYLLEKSRVVHQAEGEKNFHIFYYIYAG 197 (653)
T ss_pred CcEEEEEEEEEeccCCceeccCCCCCceeeHHHHHhC
Confidence 9999999999999999999999999999999999998
No 11
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=100.00 E-value=6e-47 Score=340.47 Aligned_cols=172 Identities=35% Similarity=0.494 Sum_probs=149.4
Q ss_pred CCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCC-Cccc---------ccccCCCccchhhhhHHH
Q psy17854 9 TQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVP-VLKG---------LKTAIEPVDYSAEKWLMK 71 (181)
Q Consensus 9 ~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p-~~f~---------i~h~agph~Y~va~~~~k 71 (181)
+..+||+.|+.|||++||.++ +.||++|++||+||||+++| +|.. ....++||+|++|+.||+
T Consensus 1 ~gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPyk~l~~iy~~~~~~~y~~~~~~~~pPHifaiA~~Ay~ 80 (674)
T cd01384 1 EGVDDMTKLSYLHEPGVLQNLKTRYELNEIYTYTGNILIAVNPFQRLPHLYDVHMMEQYKGAALGELSPHVFAIADAAYR 80 (674)
T ss_pred CCcchHhhCCCCCHHHHHHHHHHHHhcCCCeeeECCEEEEECCCCcCCcCCCHHHHHHhcCCCcCCCCCCHHHHHHHHHH
Confidence 357899999999999999888 78889999999999999999 5543 123579999999999999
Q ss_pred hcCCCccchhhhhhc-c--CC-----cccccccc---cc--chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEE
Q psy17854 72 NMDPLNENVVSLLQV-S--QD-----PFVAHIWK---DA--EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRI 138 (181)
Q Consensus 72 n~d~~~~~~~~ll~~-S--~~-----~~l~~l~~---~~--~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l 138 (181)
+|....++|++++++ | ++ .++.++.. .. ....+++++.+++|||||||||+|.+|+||||||||+++
T Consensus 81 ~m~~~~~~QsIiisGESGaGKTe~~K~il~yLa~~~~~~~~~~~~i~~~il~~npiLEAFGNAkT~~N~NSSRFGK~~~l 160 (674)
T cd01384 81 AMINEGKSQSILVSGESGAGKTETTKMLMRYLAYMGGRAGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEI 160 (674)
T ss_pred HHHHcCCCceEEEECCCCCCchhHHHHHHHHHHhhcCCCCcccccHHHHHHHHHHHHHHhhCCCCCCCCCcchhheeEEE
Confidence 999999999888743 2 22 33443322 11 234688999999999999999999999999999999999
Q ss_pred EecCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 139 NFDASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 139 ~f~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
+|+..|.+.||+|.+|||||+||+.|++|||||||||||++|
T Consensus 161 ~f~~~g~i~Ga~i~~yLLEksRv~~~~~gErnfHIFYqLl~g 202 (674)
T cd01384 161 QFDDYGRISGAAIRTYLLERSRVCQISDPERNYHCFYQLCAA 202 (674)
T ss_pred EECCCCcEEEEEEEEEecccCceeecCCCCCchhHHHHHHcC
Confidence 999999999999999999999999999999999999999998
No 12
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=100.00 E-value=9.7e-47 Score=339.57 Aligned_cols=170 Identities=36% Similarity=0.564 Sum_probs=148.8
Q ss_pred cCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHhcC
Q psy17854 11 FGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKNMD 74 (181)
Q Consensus 11 ~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn~d 74 (181)
.+||+.|+.|+|++||.++ +.||++|++||+||||+++|+|.. ....++||+|++|+.||++|.
T Consensus 2 v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~ly~~~~~~~Y~~~~~~~~~PHifaiA~~Ay~~m~ 81 (674)
T cd01378 2 VDDLVLLSKISEEAIVENLKKRFQNDLIYTYIGPVLISVNPFKQLPIYTDETIELYKGKSRYELPPHIYALADNAYRSMK 81 (674)
T ss_pred cchhhhCCCCCHHHHHHHHHHHHhcCCCeeccCCcEEEEcCCCCCCCCCHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4799999999999999888 788899999999999999996643 123579999999999999999
Q ss_pred CCccchhhhhhc-c--C-----Ccccccccccc----chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC
Q psy17854 75 PLNENVVSLLQV-S--Q-----DPFVAHIWKDA----EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA 142 (181)
Q Consensus 75 ~~~~~~~~ll~~-S--~-----~~~l~~l~~~~----~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~ 142 (181)
...++|++++++ | + +.++.++..-+ ....+++++.+++|||||||||+|.+|+|||||||+++++|+.
T Consensus 82 ~~~~~QsIiisGESGaGKTe~~K~il~yL~~~~~~~~~~~~i~~~i~~~npiLEAFGNAkT~~N~NSSRFgk~~~l~f~~ 161 (674)
T cd01378 82 SENENQCVIISGESGAGKTEAAKKIMQYIAAVSGGGQKVERVKDVILQSNPLLEAFGNAKTLRNNNSSRFGKYMEIQFDF 161 (674)
T ss_pred HcCCCceEEEEcCCCCCcchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHHHHHhhccccCCCCCcchhheeEEEEECC
Confidence 999999988753 2 2 23444443321 1245889999999999999999999999999999999999999
Q ss_pred CCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 143 SGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 143 ~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
.|.+.||+|.+||||||||+.+++||||||||||||+|
T Consensus 162 ~g~i~ga~i~~yLLEksRVv~~~~gErnfHIFYqll~g 199 (674)
T cd01378 162 KGDPVGGKITNYLLEKSRVVSQNKGERNFHIFYQLLAG 199 (674)
T ss_pred CCCEeeEEEEEeecCCCceeecCCCCchhHHHHHHHcC
Confidence 99999999999999999999999999999999999998
No 13
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=100.00 E-value=2.7e-46 Score=336.60 Aligned_cols=170 Identities=34% Similarity=0.477 Sum_probs=147.6
Q ss_pred CcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHhc
Q psy17854 10 QFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKNM 73 (181)
Q Consensus 10 ~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn~ 73 (181)
..+||+.|+.|+|++||.++ +.||++|++||+||||+.+|+|.. ....++||+|++|+.||++|
T Consensus 2 gv~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~ly~~~~~~~Y~~~~~~~~~PHifavA~~Ay~~m 81 (677)
T cd01387 2 GVEDMTQLEDLQETTVLWNLKLRFERNLIYTYIGSILVSVNPYKMFPIYGPEQVQQYAGRALGENPPHLFAIANLAFAKM 81 (677)
T ss_pred CcchhhhCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHH
Confidence 45899999999999999988 788899999999999999996543 12347999999999999999
Q ss_pred CCCccchhhhhhc---cCC-----cccccccc--ccchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC
Q psy17854 74 DPLNENVVSLLQV---SQD-----PFVAHIWK--DAEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS 143 (181)
Q Consensus 74 d~~~~~~~~ll~~---S~~-----~~l~~l~~--~~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~ 143 (181)
.....+|++++++ |++ .++.++.. ......+++++.+++|||||||||+|.+|+|||||||+++|+| +.
T Consensus 82 ~~~~~~QsIiisGESGaGKTe~~k~il~yl~~~~~~~~~~i~~~il~snpiLEAFGNAkT~~N~NSSRfGk~~~l~f-~~ 160 (677)
T cd01387 82 LDAKQNQCVIISGESGSGKTEATKLILRYLAAMNQGGSAVITEQILEATPLLEAFGNAKTVRNDNSSRFGKFVEIFL-EG 160 (677)
T ss_pred HhcCCCceEEEEcCCCCCeehHHHHHHHHHHhhcCCCcchHHHHHHHHHHHHHHHhCcCCCCCCCccccceEEEEEe-cC
Confidence 9989999888743 222 34444432 1223568899999999999999999999999999999999999 57
Q ss_pred CcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 144 GYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 144 ~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|.|.||+|.+||||||||+.|++||||||||||||+|
T Consensus 161 g~i~Ga~i~~yLLEksRvv~q~~gErnfHIFYqll~g 197 (677)
T cd01387 161 GVIVGAITSQYLLEKSRIVFQAKNERNYHIFYELLAG 197 (677)
T ss_pred CcEeEEEEEEEecCCCceeecCCCCchHHHHHHHHhC
Confidence 9999999999999999999999999999999999998
No 14
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=100.00 E-value=1.2e-45 Score=333.65 Aligned_cols=170 Identities=38% Similarity=0.564 Sum_probs=149.3
Q ss_pred cCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc--c-------cccCCCccchhhhhHHHhcC
Q psy17854 11 FGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG--L-------KTAIEPVDYSAEKWLMKNMD 74 (181)
Q Consensus 11 ~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~--i-------~h~agph~Y~va~~~~kn~d 74 (181)
.+||+.|+.|+|++||.++ +.||++|++||+||||+++|.|.. + ...++||+|++|+.||++|.
T Consensus 2 ~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~iLiavNPy~~l~~y~~~~~~~y~~~~~~~~pPHifavA~~Ay~~m~ 81 (679)
T cd00124 2 VDDLASLPHLNEATVLNNLRQRYKKDLIYTYAGPILIAVNPYKDLPNYGPETIRKYRGKSRSELPPHVFAIADRAYRNML 81 (679)
T ss_pred CcchhhCCCCCHHHHHHHHHHHHcCCCCeEeECCEEEEECCCCCCCCCCHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHH
Confidence 6899999999999999988 678999999999999999997443 1 13468999999999999999
Q ss_pred CCccchhhhhhc---cC-----Ccccccccccc--chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCCC
Q psy17854 75 PLNENVVSLLQV---SQ-----DPFVAHIWKDA--EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASG 144 (181)
Q Consensus 75 ~~~~~~~~ll~~---S~-----~~~l~~l~~~~--~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~~ 144 (181)
...++|++++++ |+ +.++.++..-. ....+++++.+++++|||||||+|.+|+|||||||+++++|+..|
T Consensus 82 ~~~~~QsIiisGESGaGKTe~~k~il~yl~~~~~~~~~~i~~~i~~~n~iLEaFGNAkT~~N~NSSRfGk~~~l~f~~~g 161 (679)
T cd00124 82 RDRRNQSIIISGESGAGKTENTKLIMKYLASLAGSNDTGIEEKILAANPILEAFGNAKTVRNNNSSRFGKFIELQFDETG 161 (679)
T ss_pred hcCCCceEEEecCCCCCchHHHHHHHHHHHhccCCCcchHHHHHHHHhHHHHHhcccccCCCCCcccceeEEEEEECCCC
Confidence 989999888743 22 23445444322 245689999999999999999999999999999999999999999
Q ss_pred cccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 145 YIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 145 ~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
++.||+|.+|||||+||+.+++||||||||||||+|
T Consensus 162 ~i~ga~i~~yLLEksRv~~~~~gErnfHIFYqll~g 197 (679)
T cd00124 162 KISGAKITTYLLEKSRVVSQEPGERNFHIFYQLLAG 197 (679)
T ss_pred cEeEEEEEEEEcccceeeccCCCCCchhHHHHHHcC
Confidence 999999999999999999999999999999999998
No 15
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=100.00 E-value=3e-45 Score=330.63 Aligned_cols=173 Identities=40% Similarity=0.567 Sum_probs=151.3
Q ss_pred cCCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCcccc---------cccCCCccchhhhhHHH
Q psy17854 8 DTQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKGL---------KTAIEPVDYSAEKWLMK 71 (181)
Q Consensus 8 ~~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~i---------~h~agph~Y~va~~~~k 71 (181)
.+..+||+.|+.|+|++||.++ +.||++|++||+||||+++|+|... ...++||+|++|+.||+
T Consensus 5 ~~~~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~~~l~~y~~~~~~~y~~~~~~~~~PHifavA~~Ay~ 84 (677)
T smart00242 5 FEGVEDLVLLTYLNEPAVLHNLKKRYLKDLIYTYIGLVLVAVNPYKQLPIYTDEVIKKYRGKSRGELPPHVFAIADNAYR 84 (677)
T ss_pred cCCcchhhcCCCCCHHHHHHHHHHHHhhCCccccccceEEEecCCccCCCCCHHHHHHccCCCCCCCCCCHHHHHHHHHH
Confidence 3688999999999999999887 7788999999999999999965431 24579999999999999
Q ss_pred hcCCCccchhhhhhc-c--CC-----cccccccccc----chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEE
Q psy17854 72 NMDPLNENVVSLLQV-S--QD-----PFVAHIWKDA----EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRIN 139 (181)
Q Consensus 72 n~d~~~~~~~~ll~~-S--~~-----~~l~~l~~~~----~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~ 139 (181)
+|....++|++++++ | ++ .++.++..-. ....+++++.++++||||||||+|.+|+|||||||+++++
T Consensus 85 ~m~~~~~~QsIiisGESGaGKTe~~k~il~yl~~~~~~~~~~~~i~~~i~~~n~iLEAFGNAkT~~N~NSSRfgk~~~l~ 164 (677)
T smart00242 85 NMLNDKENQSIIISGESGAGKTENTKKIMQYLAAVSGSNTSVGSVEDQILESNPILEAFGNAKTVRNNNSSRFGKFIEIH 164 (677)
T ss_pred HHHhcCCCceEEEecCCCCcchHHHHHHHHHHHhhcCCCCccccHHHHHHHHHHHHHHhhccccCCCCCccchheeEEEE
Confidence 999999999888743 2 22 3444443321 2457889999999999999999999999999999999999
Q ss_pred ecCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 140 FDASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 140 f~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|+..|+|.||+|.+||||||||+.+++||||||||||||+|
T Consensus 165 f~~~g~i~ga~i~~yLLEksRv~~~~~gErnfHIFYqLl~g 205 (677)
T smart00242 165 FDAKGKIVGAKIETYLLEKSRVVSQAKGERNYHIFYQLLAG 205 (677)
T ss_pred ECCCCcEeEEEEEEeecCCceEEecCCCCCchHHHHHHHcC
Confidence 99999999999999999999999999999999999999998
No 16
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=100.00 E-value=8.7e-45 Score=329.29 Aligned_cols=169 Identities=40% Similarity=0.611 Sum_probs=136.5
Q ss_pred CccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHhcCC
Q psy17854 12 GARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKNMDP 75 (181)
Q Consensus 12 ~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn~d~ 75 (181)
+||+.|+.|+|++||.++ ++||++|++||+||||+++|+|.. ....++||+|++|+.||++|..
T Consensus 2 eDl~~l~~l~e~~il~~L~~R~~~~~iyT~~G~~Li~vNP~~~l~~y~~~~~~~y~~~~~~~~~PHif~~a~~A~~~m~~ 81 (689)
T PF00063_consen 2 EDLASLSHLNEASILHNLRQRYKKDLIYTYIGPILIAVNPYKPLPLYSDEVMEKYRGKRRQDLPPHIFAVAQRAYRQMLR 81 (689)
T ss_dssp SBGGGSSS-SHHHHHHHHHHHHHTT--EEEETTEEEEE--SS--STSSHHHHHHHTTS-GGGS-SSHHHHHHHHHHHHHH
T ss_pred ChhhhCCCCCHHHHHHHHHHHHccCCccccCCCeEEEECCchhhhhhhhhhhhhhhhhccccccCccchhhhcccccccc
Confidence 699999999999999888 788999999999999999996554 1345799999999999999999
Q ss_pred Cccchhhhhhc---cCC-----cccccccc---cc---chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEec
Q psy17854 76 LNENVVSLLQV---SQD-----PFVAHIWK---DA---EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFD 141 (181)
Q Consensus 76 ~~~~~~~ll~~---S~~-----~~l~~l~~---~~---~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~ 141 (181)
..++|++++++ |++ .+++++.. .. ....+.+++.++++||||||||+|..|+|||||||+++++|+
T Consensus 82 ~~~~Q~IiisGeSGsGKTe~~k~il~~L~~~~~~~~~~~~~~i~~~i~~~~~iLeaFGnAkT~~N~nSSRfgk~~~l~f~ 161 (689)
T PF00063_consen 82 TRQNQSIIISGESGSGKTETSKLILRYLASLSSSSSSSKSSSIEKKILAANPILEAFGNAKTPRNDNSSRFGKFIELQFD 161 (689)
T ss_dssp HTSEEEEEEEESTTSSHHHHHHHHHHHHHHHSSSSSSTCTTHHHHHHHHHHHHHHHHHEEEESSETTEESSEEEEEEEEE
T ss_pred cccccceeeccccccccccchHHHHHHHhhhcccccccccccccceEEeccchhhhhcccccccCCcccccceEEEEEec
Confidence 89999888753 332 34444433 22 235789999999999999999999999999999999999999
Q ss_pred CCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 142 ASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 142 ~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
.+|.+.|+++.+|||||+||+.+++||||||||||||+|
T Consensus 162 ~~~~~~g~~i~~ylLEksRv~~~~~~ErnfhiFYqll~G 200 (689)
T PF00063_consen 162 DSGQIVGAKIETYLLEKSRVVRQPPGERNFHIFYQLLAG 200 (689)
T ss_dssp TTSSEEEEEEEEEEE-GGGGT---TTS-SBHHHHHHHHT
T ss_pred ccccccccceecccccccceeeccccccccchhhhhhhc
Confidence 999999999999999999999999999999999999998
No 17
>KOG0164|consensus
Probab=100.00 E-value=2.2e-44 Score=314.41 Aligned_cols=170 Identities=33% Similarity=0.477 Sum_probs=150.8
Q ss_pred cCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc--------c-cccCCCccchhhhhHHHhcC
Q psy17854 11 FGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG--------L-KTAIEPVDYSAEKWLMKNMD 74 (181)
Q Consensus 11 ~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~--------i-~h~agph~Y~va~~~~kn~d 74 (181)
-+|++.|+.++|++++.|+ ..|||+|+++++||||+.+++|.. . ..+.+||+|++++.+|+.|.
T Consensus 10 v~DfVLle~~~~~~f~~NLrlRf~~g~IYTyIGeV~VsvNPYrql~IYg~~ti~kYkgre~yE~~PHlfAiad~aYrslk 89 (1001)
T KOG0164|consen 10 VQDFVLLETVSEESFMENLRLRFENGRIYTYIGEVLVSVNPYRQLNIYGPETIEKYKGREFYERPPHLFAIADAAYRSLK 89 (1001)
T ss_pred ceeeEeeccccHHHHHHHHHHHHhcCceEEEEccEEEEecchhhcCccCHHHHHHhCCeeecccCchHHHhHHHHHHHHH
Confidence 3699999999999999877 889999999999999999997654 1 23368999999999999999
Q ss_pred CCccchhhhhhc-cC----------Cccccccccccc---hhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEe
Q psy17854 75 PLNENVVSLLQV-SQ----------DPFVAHIWKDAE---IGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINF 140 (181)
Q Consensus 75 ~~~~~~~~ll~~-S~----------~~~l~~l~~~~~---~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f 140 (181)
...+|+|+++++ |+ ..|++.+....+ -.++...++++|+||||||||||.+|+||||||||+.++|
T Consensus 90 ~r~rDtcI~ISGESGAGKTEASK~iMqYiAAvtn~~qq~eierVKn~LLqSN~VLEAFGNAKT~RNdNSSRFGKYMDInF 169 (1001)
T KOG0164|consen 90 RRSRDTCILISGESGAGKTEASKIIMQYIAAVTNASQQGEIERVKNVLLQSNCVLEAFGNAKTNRNDNSSRFGKYMDINF 169 (1001)
T ss_pred hccCCeEEEEecCCCCCccHHHHHHHHHHHHhcCccccchHHHHHHHHHhcchHHHHhcccccccCCchhhhhcceeeec
Confidence 999999999864 32 135565555433 3677899999999999999999999999999999999999
Q ss_pred cCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 141 DASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 141 ~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|-.|...|+.|..||||||||+.|.+||||||||||||.|
T Consensus 170 DfKGdPvGG~I~nYLLEKSRVv~Q~~GERNFH~FYQLL~G 209 (1001)
T KOG0164|consen 170 DFKGDPVGGHITNYLLEKSRVVKQQPGERNFHIFYQLLRG 209 (1001)
T ss_pred cccCCcccchHhHHHHhhhhhhhcCcCcchHHHHHHHHcC
Confidence 9999999999999999999999999999999999999998
No 18
>KOG0161|consensus
Probab=100.00 E-value=5.5e-44 Score=341.57 Aligned_cols=173 Identities=42% Similarity=0.618 Sum_probs=154.0
Q ss_pred CCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHh
Q psy17854 9 TQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKN 72 (181)
Q Consensus 9 ~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn 72 (181)
+.-+||..|..|+|++||+++ ++|||+|..+|.+|||+++|+|.. -++.+|||+|+|++.||++
T Consensus 82 dk~eDMa~LT~lNeasVL~nL~~RY~~~lIyTYSGLFcVviNPyk~lpiYt~~v~~~ykgkrr~e~pPHIfavad~AYr~ 161 (1930)
T KOG0161|consen 82 DKVEDMAELTFLNEASVLHNLKQRYASDLIYTYSGLFCVVINPYKRLPIYTESVVRMYKGKKREEMPPHIFAVADEAYRN 161 (1930)
T ss_pred cccccHHHhcccChHHHHhhHHHHHHhChHHHcccceeEEecCCcCCCCCCHHHHHHhcccccccCCchHHHHHHHHHHH
Confidence 677899999999999999999 788899999999999999998874 3577999999999999999
Q ss_pred cCCCccchhhhhhccC--------Cc---ccccccccc-----chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEE
Q psy17854 73 MDPLNENVVSLLQVSQ--------DP---FVAHIWKDA-----EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFI 136 (181)
Q Consensus 73 ~d~~~~~~~~ll~~S~--------~~---~l~~l~~~~-----~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~ 136 (181)
|...+++|++|+++.. +. |++.+.... ....+++++.+++|+|++||||+|++|+||||||+||
T Consensus 162 mL~~renQSiLiTGESGAGKTeNTKkVIqyla~va~~~~~~~~~~~~le~qi~q~npvLeaFGNa~tvrn~NssRFgkfi 241 (1930)
T KOG0161|consen 162 MLQDRENQSILITGESGAGKTENTKKVIQYLASVASSSTKKVKIEGTLEDQILQANPVLEAFGNAKTVRNDNSSRFGKFI 241 (1930)
T ss_pred HHhcCCCceEeeecCCCCCcchhHHHHHHHHHHHhhccccCCCCCCChHHHHHHhCchHHHhcChhhhcCCCCcccceeE
Confidence 9999999999986532 22 333332211 1157889999999999999999999999999999999
Q ss_pred EEEecCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcCC
Q psy17854 137 RINFDASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAGR 181 (181)
Q Consensus 137 ~l~f~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g~ 181 (181)
.++|+.+|.|.||.|.+||||||||++|+++|||||||||||.|.
T Consensus 242 rI~F~~~G~i~~a~Ie~yLLEKsRv~~Q~~~Er~yhiFyqlls~~ 286 (1930)
T KOG0161|consen 242 RIHFDATGKIAGADIETYLLEKSRVIRQAPGERNYHIFYQLLSGA 286 (1930)
T ss_pred EEecCCCCccchhhHHHHHHHHhHhhccCcchhHHHHHHHHHhCC
Confidence 999999999999999999999999999999999999999999974
No 19
>KOG0162|consensus
Probab=100.00 E-value=1e-43 Score=310.74 Aligned_cols=170 Identities=32% Similarity=0.509 Sum_probs=149.4
Q ss_pred CcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCcccc----------cccCCCccchhhhhHHHh
Q psy17854 10 QFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKGL----------KTAIEPVDYSAEKWLMKN 72 (181)
Q Consensus 10 ~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~i----------~h~agph~Y~va~~~~kn 72 (181)
--+|||.|+-++|++|-.++ ..+||+|.+||+||||+.+| ||.. +.+.+||+|++|+.+|+|
T Consensus 19 GVdDm~LLsKiteesI~eNLkkRf~n~~IfTYIG~VLISVNPFk~m~-~ft~~~~~~YqG~~q~E~pPHiyAladnmY~n 97 (1106)
T KOG0162|consen 19 GVDDMVLLSKITEESINENLKKRFMNGYIFTYIGHVLISVNPFKQMP-YFTEKEMELYQGAAQYENPPHIYALADNMYRN 97 (1106)
T ss_pred cccceeehhhccHHHHHHHHHHHhhcCceEEEeeeEEEeecchhccc-cchHHHHHHhhchhhccCCchhhhhHHHHHHH
Confidence 45799999999999998887 67789999999999999999 5542 334699999999999999
Q ss_pred cCCCccchhhhhhcc-CC----------cccccccccc-chhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEe
Q psy17854 73 MDPLNENVVSLLQVS-QD----------PFVAHIWKDA-EIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINF 140 (181)
Q Consensus 73 ~d~~~~~~~~ll~~S-~~----------~~l~~l~~~~-~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f 140 (181)
|...+++||+++++. +. .|++++.... ....+.+.|+++||+||+||||+|++|+||||||||++++|
T Consensus 98 M~~~~EnQCVIISGESGAGKT~aAK~IM~YIs~vS~~g~kvq~vkdiiL~sNPLLEaFG~akTvRNnNSSR~GKY~Ei~F 177 (1106)
T KOG0162|consen 98 MKIDNENQCVIISGESGAGKTVAAKRIMQYISRVSGGGEKVQHVKDIILQSNPLLEAFGNAKTVRNNNSSRFGKYLEIQF 177 (1106)
T ss_pred hhhccccceEEEecCCCCCchHHHHHHHHHHHHhccCCcchhhhhhHhhccchHHHHhcchhhhccCCcccccceEEEEe
Confidence 999999999988653 21 3455544322 23577889999999999999999999999999999999999
Q ss_pred cCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 141 DASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 141 ~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
+..|...|++|.+|||||+|||.|..+||||||||||+.|
T Consensus 178 s~ggeP~ggkisNfLLEKsRVV~q~~neRnFHIfYQ~~kg 217 (1106)
T KOG0162|consen 178 SRGGEPDGGKISNFLLEKSRVVMQNENERNFHIFYQLTKG 217 (1106)
T ss_pred cCCCCcCcchhhHHHHhhhhhhhccCCccceeeehhhhcC
Confidence 9999999999999999999999999999999999999987
No 20
>KOG0163|consensus
Probab=100.00 E-value=8.2e-42 Score=299.57 Aligned_cols=175 Identities=33% Similarity=0.519 Sum_probs=151.3
Q ss_pred CcCCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---ccc-------cCCCccchhhhhH
Q psy17854 7 SDTQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---LKT-------AIEPVDYSAEKWL 69 (181)
Q Consensus 7 ~~~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---i~h-------~agph~Y~va~~~ 69 (181)
|+.+-+|=|.|-.|+|++.|.+. ..|||+.+|||+||||+..+..+. |+. ..+||+|++|+.+
T Consensus 55 ~~k~veDNC~Lm~LNEATlL~Nik~RY~k~kIYtYVANILIavNPY~~I~~lYs~etIK~Y~GkSLGq~~PHvFAIADKa 134 (1259)
T KOG0163|consen 55 SPKDVEDNCELMHLNEATLLNNIKLRYYKDKIYTYVANILIAVNPYQEIDGLYSPETIKEYRGKSLGQLPPHVFAIADKA 134 (1259)
T ss_pred cccccccccceeeccHHHHhhhhhhhhccCchhhhhhhhheeccchhhcccccCHHHHHHhcCCcccCCCCceeeechHH
Confidence 45678899999999999999887 678899999999999999886443 333 3689999999999
Q ss_pred HHhcCCCccchhhhhhc--------cCCccccccccccc-hhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEe
Q psy17854 70 MKNMDPLNENVVSLLQV--------SQDPFVAHIWKDAE-IGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINF 140 (181)
Q Consensus 70 ~kn~d~~~~~~~~ll~~--------S~~~~l~~l~~~~~-~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f 140 (181)
|+.|....-+|.++.++ |++.+++.+..+.+ ...++++++.+||||||||||||++|+||||||||+++||
T Consensus 135 ~RdMr~~k~SQSIIVSGESGAGKTEstK~vLrYLces~gsag~Iq~rileaNPiLEAFGNAKT~RNNNSSRFGKFveiHf 214 (1259)
T KOG0163|consen 135 YRDMRVYKLSQSIIVSGESGAGKTESTKAVLRYLCESWGSAGPIQTRILEANPILEAFGNAKTLRNNNSSRFGKFVEIHF 214 (1259)
T ss_pred HHHHHHHhhcccEEEecCCCCCcchhHHHHHHHHHhccCCCCcHHHHHhccChHHHHhccchhhccCChhhccceEEEEE
Confidence 99998888788766643 33445555543222 4678999999999999999999999999999999999999
Q ss_pred cCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcCC
Q psy17854 141 DASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAGR 181 (181)
Q Consensus 141 ~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g~ 181 (181)
+..|.++|+-+.+||||||||++|+.+||||||||||+||.
T Consensus 215 ~dk~~VvGGyvSHYLLEkSRiC~Qaa~ERNYHiFY~LiAGa 255 (1259)
T KOG0163|consen 215 DDKGQVVGGYVSHYLLEKSRICRQAAEERNYHIFYQLIAGA 255 (1259)
T ss_pred cCCCceechhhhHHHHHHhHHHHhhhcccchhHHHHHHcCC
Confidence 99999999999999999999999999999999999999994
No 21
>KOG0160|consensus
Probab=100.00 E-value=8.3e-40 Score=295.23 Aligned_cols=171 Identities=38% Similarity=0.577 Sum_probs=150.8
Q ss_pred CcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCCCccc---------ccccCCCccchhhhhHHHhc
Q psy17854 10 QFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVPVLKG---------LKTAIEPVDYSAEKWLMKNM 73 (181)
Q Consensus 10 ~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p~~f~---------i~h~agph~Y~va~~~~kn~ 73 (181)
.-+|||.|++|||++||.++ ..||+.|.+||++|||...|..++ ......||+|++++.+|+.|
T Consensus 9 ~~dDlt~lsyl~epaVL~~L~~Ry~~~~IYty~G~vLiAiNPf~~~~~ly~~~~i~~y~~~~~~l~ph~favA~~ay~~m 88 (862)
T KOG0160|consen 9 GVDDLTTLSYLHEPAVLHNLAKRYEQNQIYTYKGIVLIAINPFKRLPHLYGKKMISAYQAIQGELSPHLFAVAEEAYRDM 88 (862)
T ss_pred CccccccCCccCcHHHHHHHHHhhhhcccchhhceeeeeeccccccchhccHHHHHhhcccccccCcchhhHHHHHHHHh
Confidence 45799999999999999988 677899999999999999995443 23367899999999999999
Q ss_pred CCCccchhhhhhc-cCC----------ccccccccccchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC
Q psy17854 74 DPLNENVVSLLQV-SQD----------PFVAHIWKDAEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA 142 (181)
Q Consensus 74 d~~~~~~~~ll~~-S~~----------~~l~~l~~~~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~ 142 (181)
-....+|.+++++ |+. .|++++........++++++.+||++|+||||+|++|+|||||||+++++|+.
T Consensus 89 ~~~~~~QsIivsGESGAgkT~~aK~~m~yla~v~~~~~~~~vE~~vL~snpi~EafgNakT~rndnsSrFgK~iei~Fd~ 168 (862)
T KOG0160|consen 89 TPDGVNQSIIVSGESGAGKTETAKYLMEYLASVGGSVEGRSIENKVLASNPILEAFGNAKTTRNDNSSRFGKVIEITFDQ 168 (862)
T ss_pred hhccCCceeeeeCCCCCchhHHHHHHHHHHHHHhccchhhHHHHHHHhcCCcchhhccchhhhcccHHHhhhHHHHhhhh
Confidence 9888888777653 332 35555555544678999999999999999999999999999999999999999
Q ss_pred CCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 143 SGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 143 ~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
.|+|.||++.+||||||||+.++++|||||||||+++|
T Consensus 169 ~~~I~GA~~~TYLLekSRv~~~~~~ernyhiFyQlca~ 206 (862)
T KOG0160|consen 169 QGRISGAKIRTYLLEKSRVVQLSAPERNYHIFYQLCAG 206 (862)
T ss_pred hcccccceeeeEEeecceeeecCccccchHHHHHHhcC
Confidence 99999999999999999999999999999999999998
No 22
>KOG4229|consensus
Probab=99.97 E-value=3.9e-32 Score=250.62 Aligned_cols=172 Identities=35% Similarity=0.515 Sum_probs=150.1
Q ss_pred cCCcCccccccCCCcchhhhhh-------hhhccCCCCeeEeCCCCCCC-Cccc---------ccccCCCccchhhhhHH
Q psy17854 8 DTQFGARTRYDRMHNRAKPQER-------KNSRRDGPSLLFVTPGSPVP-VLKG---------LKTAIEPVDYSAEKWLM 70 (181)
Q Consensus 8 ~~~~~~~~~l~~l~e~~~l~~~-------~~~t~~G~~li~vNP~~~~p-~~f~---------i~h~agph~Y~va~~~~ 70 (181)
+.+++||+.|.+++|++++.++ .+|+++|.+++.+||+++.| +|.. -....+||+|++++.+|
T Consensus 60 ~~~~~Dl~~l~~l~e~~~~~nl~~R~~~~~Iy~y~gsil~~lnp~~~~~fiy~~~~~~ly~~~~~ge~~phifa~ad~~y 139 (1062)
T KOG4229|consen 60 VEDVEDLAQLEDLSEATILENLLVRYKRNPIYEYLGSILVALNPLQPIPFLYLPRFSKLYSGKPLGEDPPHIFAIADLAY 139 (1062)
T ss_pred cccHHHHhhccccchhhhhHHHHHHHccCCceeeechhhhhcCccccccccccHHhhccccccccCCCCcchhhhhhhHH
Confidence 4789999999999999999998 56779999999999999999 4321 12456899999999999
Q ss_pred HhcCCCccchhhhhhc-c--C-----Cc---cccccccccchhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEE
Q psy17854 71 KNMDPLNENVVSLLQV-S--Q-----DP---FVAHIWKDAEIGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRIN 139 (181)
Q Consensus 71 kn~d~~~~~~~~ll~~-S--~-----~~---~l~~l~~~~~~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~ 139 (181)
++|.....+||+++++ | + +. +++.|.. +.+..++..++.++++||+||||+|..|+||||||+++++.
T Consensus 140 ~~m~~~~~~QcivisGesgsGktest~l~~~~Ls~Lsq-~~~~~~e~~il~a~~llEafgnA~t~~ndnssrfgk~i~~~ 218 (1062)
T KOG4229|consen 140 QDMLREKEDQCIVISGESGSGKTESTKLLWQFLSILSQ-GNNSPVEQLILSANPLLEAFGNAKTPRNDNSSRFGKYIKVN 218 (1062)
T ss_pred HhhhhhccceeEEEecccCCCCchhhHHHHHHHHHHhc-CCCCchhhhhhcchHHHHHhcccCCcccCchhhhhheEEec
Confidence 9999999999988753 2 2 22 2332332 55678889999999999999999999999999999999999
Q ss_pred ecCCCcccceeeeeEeeccccccccCCCCCchhhHHhhhcC
Q psy17854 140 FDASGYIAGANIETYLLEKSRAIRQAKDERTFHIFYQILAG 180 (181)
Q Consensus 140 f~~~~~~~g~~~~~~lleksRv~~~~~~ernfhiFy~ll~g 180 (181)
|.++|.+.||++..|||||+||+.|..+||||||||++++|
T Consensus 219 ~~~~g~i~Gaki~~yllEKsr~~~q~~~e~nyhify~~~ag 259 (1062)
T KOG4229|consen 219 FRKTGIIEGAKIVEYLLEKSRLVIQAGGERNYHIFYYLLAG 259 (1062)
T ss_pred cccCCCCCcchHHHHHHHHHHHHHhcCCCcccccchhheec
Confidence 99999999999999999999999999999999999999987
No 23
>PTZ00014 myosin-A; Provisional
Probab=99.17 E-value=4.9e-12 Score=116.74 Aligned_cols=150 Identities=19% Similarity=0.252 Sum_probs=113.5
Q ss_pred hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccch--hhH
Q psy17854 27 QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEI--GEL 104 (181)
Q Consensus 27 ~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~--~~v 104 (181)
.++++..+ ++...+..|....+..|.|+||||+|.|.+.||++||+|.+++++..++..|.+++++.+|..... ...
T Consensus 556 ~~kl~~~~-~~~~~f~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~ 634 (821)
T PTZ00014 556 VSSCNTNL-KNNPKYKPAKVDSNKNFVIKHTIGDIQYCASGFLFKNKDVLRPELVEVVKASPNPLVRDLFEGVEVEKGKL 634 (821)
T ss_pred HHHHHHHh-cCCCCccCCCCCCCCceEEEEeceeeeeccCcHHHhccccchHHHHHHHHhCccHHHHHHhcccccccccc
Confidence 45566555 555667777755555899999999999999999999999999999999999999999999975321 112
Q ss_pred HHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC-CCcccceeee-----eEeeccccccccCCCCC-chhhHHhh
Q psy17854 105 EQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA-SGYIAGANIE-----TYLLEKSRAIRQAKDER-TFHIFYQI 177 (181)
Q Consensus 105 ~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~-~~~~~g~~~~-----~~lleksRv~~~~~~er-nfhiFy~l 177 (181)
.+..+.+....++.....+.+|...++|.|||.++-.+ -+.+....+. ..+||--||.+.+-..| .|.-|+.-
T Consensus 635 ~k~~tv~s~Fk~qL~~Lm~~L~~t~phfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvLE~iri~r~Gyp~R~~f~~F~~r 714 (821)
T PTZ00014 635 AKGQLIGSQFLNQLDSLMSLINSTEPHFIRCIKPNENKKPLDWNSSKVLIQLHSLSILEALQLRQLGFSYRRTFAEFLSQ 714 (821)
T ss_pred cCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCcCcccCccccchHhHHHHhhhhhHHHHHHHHhcCCcccccHHHHHHH
Confidence 22234455566778888888999999999999997653 2333333333 24699999999888887 88888754
No 24
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins. Myosins in this group have been associated with functions in sensory systems such as vision and hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydr
Probab=99.15 E-value=5.2e-12 Score=114.73 Aligned_cols=160 Identities=18% Similarity=0.181 Sum_probs=116.7
Q ss_pred cccCCCcchh--------hhhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhcc
Q psy17854 16 RYDRMHNRAK--------PQERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVS 87 (181)
Q Consensus 16 ~l~~l~e~~~--------l~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S 87 (181)
.|+-|.|++. |.++++..+ |+...++.|....+..|.|+||||+|.|.+.||++||+|.+++++..++..|
T Consensus 437 il~lLDee~~~p~~td~~f~~kl~~~~-~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S 515 (671)
T cd01381 437 IMSLIDEESKFPKGTDQTMLEKLHSQH-GLHSNYLKPKSTQETQFGINHFAGVVFYDTRGFLEKNRDTFSGDLSQLVQSS 515 (671)
T ss_pred cceechHhhcCCCCCHHHHHHHHHHHh-cCCCCcccCCCCCCCceEEEEecceEeeccCCHHHhccchhhHHHHHHHHhC
Confidence 4455556555 455676666 5556777777666668999999999999999999999999999999999999
Q ss_pred CCccccccccccch---hhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC-CCcccceeee-----eEeecc
Q psy17854 88 QDPFVAHIWKDAEI---GELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA-SGYIAGANIE-----TYLLEK 158 (181)
Q Consensus 88 ~~~~l~~l~~~~~~---~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~-~~~~~g~~~~-----~~llek 158 (181)
.+.+++.+|..... ....++.+.+..+..+.......+|...++|.|||.++-.+ -+.+....+. ..+||-
T Consensus 516 ~n~~i~~lf~~~~~~~~~~~~k~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~~~~fd~~~V~~QLr~~Gvle~ 595 (671)
T cd01381 516 KNKFLKQIFQADVEMGAETRKKKPTLSSQFRRSLDLLMRTLSSCQPFFIRCIKPNEYKEPMVFDRELCVRQLRYSGMMET 595 (671)
T ss_pred hHHHHHHHhcccccccccccccCCcHHHHHHHHHHHHHHHHhcCCCeEEEEeCcchhhccCccChHHHHHHHHhcchHHH
Confidence 99999999975431 11112334445556667777788888899999999997643 2333333333 256888
Q ss_pred ccccccCCCCC-chhhHHh
Q psy17854 159 SRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 159 sRv~~~~~~er-nfhiFy~ 176 (181)
-|+.+..-..| .|.-|+.
T Consensus 596 iri~r~Gyp~r~~~~~F~~ 614 (671)
T cd01381 596 IRIRRAGYPIRHTFREFVE 614 (671)
T ss_pred HHHHHcCcCceecHHHHHH
Confidence 88888887777 7777654
No 25
>cd01380 MYSc_type_V Myosin motor domain, type V myosins. Myosins V transport a variety of intracellular cargo processively along actin filaments, such as membraneous organelles and mRNA. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an act
Probab=99.10 E-value=1.1e-11 Score=113.12 Aligned_cols=160 Identities=16% Similarity=0.212 Sum_probs=114.0
Q ss_pred cccCCCcchhh--------hhhhhhccCC-CCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhc
Q psy17854 16 RYDRMHNRAKP--------QERKNSRRDG-PSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQV 86 (181)
Q Consensus 16 ~l~~l~e~~~l--------~~~~~~t~~G-~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~ 86 (181)
.|+-|.|++.+ .+++...+.+ .+..+..|.... ..|.|+||||+|.|.+.||++||+|.+++++..++..
T Consensus 442 il~lLdee~~~p~~td~~f~~kl~~~~~~~~~~~~~~~~~~~-~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~ll~~ 520 (691)
T cd01380 442 ILSLLDEECRLPKGSDESWAQKLYNKLPKKKNPHFEKPRFGQ-TSFTVKHFADDVEYDVDGFLEKNRDTVSDEHLDVLKA 520 (691)
T ss_pred hHHHhHHhhcCCCCChHHHHHHHHHHhcccCCCCccCCCCCC-CeeEEEEccCCcccccccHHHhccccccHHHHHHHHh
Confidence 34445555554 4556666643 566777776544 3899999999999999999999999999999999999
Q ss_pred cCCccccccccccchhh-------------------HHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC-Ccc
Q psy17854 87 SQDPFVAHIWKDAEIGE-------------------LEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS-GYI 146 (181)
Q Consensus 87 S~~~~l~~l~~~~~~~~-------------------v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~-~~~ 146 (181)
|.+++++.+|....... .....+.+..+..+.....+.+|...++|.|||.+.-.+. +.+
T Consensus 521 S~~~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~~~~f 600 (691)
T cd01380 521 SKNPFLKEVLDAAELASSSSSSAKSKPAAKRPPKRAKQHKPTVGSQFKSSLIELMSTLNSTNPHYIRCIKPNDEKKPFKF 600 (691)
T ss_pred CccHHHHHHhhhhcccccccccccccccccccccccccCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCcCcc
Confidence 99999999986432100 0112233445566777888888999999999999976532 333
Q ss_pred cceeee-----eEeeccccccccCCCCC-chhhHHh
Q psy17854 147 AGANIE-----TYLLEKSRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 147 ~g~~~~-----~~lleksRv~~~~~~er-nfhiFy~ 176 (181)
....+. ..+||--||.+..-..| .|.-|+.
T Consensus 601 d~~~V~~QLr~~GvlE~iri~r~Gyp~R~~~~~F~~ 636 (691)
T cd01380 601 EPKRVLQQLRACGVLETIRISAAGFPSRWTYEEFAQ 636 (691)
T ss_pred CHHHHHHHHHHhchHHHHHHHhccCCccccHHHHHH
Confidence 333332 25688889988887777 6666643
No 26
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new act
Probab=99.05 E-value=3.1e-11 Score=109.72 Aligned_cols=148 Identities=17% Similarity=0.149 Sum_probs=108.2
Q ss_pred hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchh--hH
Q psy17854 27 QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIG--EL 104 (181)
Q Consensus 27 ~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~--~v 104 (181)
.+++...+ ++...+..|.... ..|.|+||||+|.|.+.||++||+|.+++++..++..|.+++++.+|+..... ..
T Consensus 461 ~~kl~~~~-~~~~~~~~~~~~~-~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~ 538 (674)
T cd01384 461 AQKLYQTF-KDHKRFEKPKLSR-TAFTIDHYAGDVTYQTDQFLDKNKDYVVAEHQALLNASNCSFVAGLFPPLPEETSKS 538 (674)
T ss_pred HHHHHHHh-cCCCCCCCCCCCC-CeeEEEEecceeeecCCCHHHhcCCcccHHHHHHHHhCchHHHHHHhcccccccccc
Confidence 44555555 4455677776543 48999999999999999999999999999999999999999999999754322 11
Q ss_pred HHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC-CCcccceeee-----eEeeccccccccCCCCC-chhhHHh
Q psy17854 105 EQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA-SGYIAGANIE-----TYLLEKSRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 105 ~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~-~~~~~g~~~~-----~~lleksRv~~~~~~er-nfhiFy~ 176 (181)
.+..+.+..+..+.....+.+|...++|.|||.++-.+ -+.+....+. ..+||--|+.+..-..| .|.-|+.
T Consensus 539 ~k~~tv~~~fk~~L~~L~~~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~r~~~~~F~~ 617 (674)
T cd01384 539 SKFSSIGSRFKQQLQSLMETLSTTEPHYIRCIKPNNVLKPGIFENENVLQQLRCGGVLEAIRISCAGYPTRRTFDEFLD 617 (674)
T ss_pred cccccHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCCCccCHHHHHHHHHHcchHHHHHHHhcCCCccccHHHHHH
Confidence 12234444556677777778888899999999997653 2333333333 35689999998887777 7777754
No 27
>KOG0161|consensus
Probab=99.03 E-value=5.8e-11 Score=116.12 Aligned_cols=151 Identities=26% Similarity=0.299 Sum_probs=120.2
Q ss_pred hhhhhhhhccCCCCeeEeCCC-CCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccch-h
Q psy17854 25 KPQERKNSRRDGPSLLFVTPG-SPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEI-G 102 (181)
Q Consensus 25 ~l~~~~~~t~~G~~li~vNP~-~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~-~ 102 (181)
.+.+++..+|.|....|.+|. ...+..|.+.||||+|.|.+.||+.||+|+.+..+..++..|++.+++.+|.+... .
T Consensus 540 tf~~kL~~~~~gk~~~f~~~k~~~~~~~F~l~HyaG~V~Y~~~~WL~Knkdpln~~v~~ll~~s~~~~v~~l~~~~~~~~ 619 (1930)
T KOG0161|consen 540 TFLEKLCDQHLGKHPKFQKPKGKKAEAHFALVHYAGTVDYNVDGWLEKNKDPLNDNVVSLLKQSTNKLVSSLFQDYAGAA 619 (1930)
T ss_pred hHHHHHHHHhhccCccccCcccccchhhhheeeecceeccCccchhhcCCCCchHHHHHHHHhcccHHHHHHhhhhhccc
Confidence 457789999999999999994 44455899999999999999999999999999999999999999999999986111 1
Q ss_pred hH------------HHHhhhhhhHHHhhccccccccCCCCcceeEEEEEec-CCCcccceeee-----eEeecccccccc
Q psy17854 103 EL------------EQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFD-ASGYIAGANIE-----TYLLEKSRAIRQ 164 (181)
Q Consensus 103 ~v------------~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~-~~~~~~g~~~~-----~~lleksRv~~~ 164 (181)
.+ ....+.+.-.-+.+....+.+|...+||.|||.+... ..|.+...-+. +.+||.-|++++
T Consensus 620 ~~~~~~~~~~~~K~g~F~Tvs~~~keql~~Lm~~l~~T~phFvRCiIPn~~K~~g~ld~~lvl~QLrcngVLEgIRicR~ 699 (1930)
T KOG0161|consen 620 AAAKGGEALKKTKKGSFRTVSQLYKEQLNKLMTTLRSTHPHFVRCIIPNEEKKPGKLDAPLVLNQLRCNGVLEGIRICRQ 699 (1930)
T ss_pred hhhhhhhhhcccCCcchhhHHHHHHHHHHHHHHHhccCCCceeEEeccCccccccccCHHHHHHHhhccCcHHHHHHHHh
Confidence 00 1123445556788899999999999999999999654 45655554444 367999999999
Q ss_pred CCCCC-chhhHH
Q psy17854 165 AKDER-TFHIFY 175 (181)
Q Consensus 165 ~~~er-nfhiFy 175 (181)
..+.| .|.-|-
T Consensus 700 GfPnr~~~~eFr 711 (1930)
T KOG0161|consen 700 GFPNRMPFQEFR 711 (1930)
T ss_pred hCccccchHHHH
Confidence 99998 666663
No 28
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins. Myosin IX is a processive single-headed motor, which might play a role in signalling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the hea
Probab=99.00 E-value=3.4e-11 Score=109.82 Aligned_cols=160 Identities=17% Similarity=0.190 Sum_probs=112.0
Q ss_pred cccCCCcchhh--------hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhcc
Q psy17854 16 RYDRMHNRAKP--------QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVS 87 (181)
Q Consensus 16 ~l~~l~e~~~l--------~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S 87 (181)
.|+-|.|++.+ .++++..+.+ ...+..|....+ .|+|+||||+|.|.+.||++||+|..++++..++..|
T Consensus 452 il~lLdee~~~p~~td~~~l~kl~~~~~~-~~~~~~~~~~~~-~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S 529 (692)
T cd01385 452 LLYLLDEESNFPHATSQTLLAKFNQQHKD-NKYYEGPQVKEP-AFIIQHYAGKVKYQIKDFREKNMDLMRQDIVALLKGS 529 (692)
T ss_pred HHHHhHHHhcCCCCCHHHHHHHHHHHhCC-CCCccCCCCCCC-eEEEEEecceeeecCCCHHHhccccccHHHHHHHHhC
Confidence 34445555554 4445555544 445677765555 8999999999999999999999999999999999999
Q ss_pred CCccccccccccchhh-----HH------HHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC-Ccccceeee---
Q psy17854 88 QDPFVAHIWKDAEIGE-----LE------QQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS-GYIAGANIE--- 152 (181)
Q Consensus 88 ~~~~l~~l~~~~~~~~-----v~------~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~-~~~~g~~~~--- 152 (181)
.+++++.+|....... .. .....+..+..+.....+.+|...++|.|||.++-.+. +......+.
T Consensus 530 ~n~~i~~lf~~~~~~~~~~~~~~~~~~~~~~~tV~~~f~~~L~~L~~~L~~t~~hfIRCIKPN~~k~p~~Fd~~~V~~QL 609 (692)
T cd01385 530 DSSYVRELIGMDPVAVFRWAVLRAAFRAMAAPSVSAQFQTSLNKLMETLGKAEPFFIRCIKSNAEKIENCFDDELVLRQL 609 (692)
T ss_pred ccHHHHHHhccCcccccccccccccccCccCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCCccCcCccCHHHHHHHH
Confidence 9999999986432110 00 01223334455666777888889999999999976532 233333222
Q ss_pred --eEeeccccccccCCCCC-chhhHHhh
Q psy17854 153 --TYLLEKSRAIRQAKDER-TFHIFYQI 177 (181)
Q Consensus 153 --~~lleksRv~~~~~~er-nfhiFy~l 177 (181)
..+||-.|+.+..-..| .|.-|+.-
T Consensus 610 r~~GvlE~irirr~Gyp~R~~~~~F~~r 637 (692)
T cd01385 610 RYTGMLETVRIRRAGYSVRYTYQDFTQQ 637 (692)
T ss_pred HhhchHHHHHHHhccCCccccHHHHHHH
Confidence 35789999988887777 77777653
No 29
>cd01378 MYSc_type_I Myosin motor domain, type I myosins. Myosin I generates movement at the leading edge in cell motility, and class I myosins have been implicated in phagocytosis and vesicle transport. Myosin I, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 picon
Probab=98.98 E-value=6.7e-11 Score=107.65 Aligned_cols=148 Identities=21% Similarity=0.188 Sum_probs=104.0
Q ss_pred hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchhh-HH
Q psy17854 27 QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIGE-LE 105 (181)
Q Consensus 27 ~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~~-v~ 105 (181)
.++++..+. +...+.+|... +..|.|+||||+|.|++.||++||+|.+++++..++..|.+++++.+|.+..... ..
T Consensus 462 ~~kl~~~~~-~~~~~~~~~~~-~~~F~I~HyAG~V~Y~~~gfleKNrD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~ 539 (674)
T cd01378 462 LEKLNKKFS-SHPHSDHFSSG-SDEFRIKHYAGDVTYSVEGFCDKNKDTLFKDLIELMQSSSNPFLRSLFPEKSDADSKK 539 (674)
T ss_pred HHHHHHHhc-cCCCCCCCCCC-CCcEEEEEeceeeeecCcCHHHhhcchhhHHHHHHHHhCchHHHHHHhcccccccccC
Confidence 344555553 33334555444 4489999999999999999999999999999999999999999999997432211 11
Q ss_pred HHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC-Ccccceeee-----eEeeccccccccCCCCC-chhhHHh
Q psy17854 106 QQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS-GYIAGANIE-----TYLLEKSRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 106 ~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~-~~~~g~~~~-----~~lleksRv~~~~~~er-nfhiFy~ 176 (181)
.....+..+..+.....+.+|...++|.|||.++-.+. +.+....+. ..+||-.|+.+..-..| .|.-|+.
T Consensus 540 ~~~tv~~~fk~qL~~Lm~~L~~t~phfIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvLE~iri~r~Gyp~R~~~~~F~~ 617 (674)
T cd01378 540 RPTTAGFKIKTSANALVETLMKCTPHYIRCIKPNETKSPNDFDESRVLHQVKYLGLLENVRVRRAGFAYRQTFDKFLQ 617 (674)
T ss_pred CCCcHHHHHHHHHHHHHHHHHccCCeEEEEECCCccCCchhcCHHHHHHHHHhcChHHHHHHHhcCCCccccHHHHHH
Confidence 11233444556777777888888999999999976542 222222222 35688888888887777 6666653
No 30
>COG5022 Myosin heavy chain [Cytoskeleton]
Probab=98.98 E-value=7.7e-11 Score=111.39 Aligned_cols=164 Identities=23% Similarity=0.276 Sum_probs=119.5
Q ss_pred ccccCCCcchhhh--------hhhhhccC-CCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhh
Q psy17854 15 TRYDRMHNRAKPQ--------ERKNSRRD-GPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQ 85 (181)
Q Consensus 15 ~~l~~l~e~~~l~--------~~~~~t~~-G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~ 85 (181)
-.|+-|+|+++|. ++++.+.- +...+|-.|...-. .|-+.||||.|.|.+.||++||+|+.+.+...++.
T Consensus 503 GIlslLDEE~~~p~atd~s~~sKL~~~l~~~~~~~f~~~rf~~~-~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~ 581 (1463)
T COG5022 503 GILSLLDEECVMPHATDESFTSKLAQRLNKNSNPKFKKSRFRDN-KFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLK 581 (1463)
T ss_pred chHhhhcHHhcCCCCCchHHHHHHHHHhccccCccccccccCCC-ceEEEeecccceeeccchhhhCcchhhHHHHHHHh
Confidence 3466677888774 44555554 55556665554443 78899999999999999999999999999999999
Q ss_pred ccCCccccccccccchhhH-HHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCCC-----cccceeee-eEeecc
Q psy17854 86 VSQDPFVAHIWKDAEIGEL-EQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASG-----YIAGANIE-TYLLEK 158 (181)
Q Consensus 86 ~S~~~~l~~l~~~~~~~~v-~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~~-----~~~g~~~~-~~llek 158 (181)
.|++.+++.+|.+.+...- ...-+.+.-+.++.....+..|..-.+|.|||.+.-.+.. .++=..+. +.+||.
T Consensus 582 ~StNe~vs~Lf~~~~~~~~K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~ 661 (1463)
T COG5022 582 ASTNEFVSTLFDDEENIESKGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLET 661 (1463)
T ss_pred hccchHHHHhhhhhhhccccCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhh
Confidence 9999999999984332111 2223444555677777888888889999999999766543 22222333 468999
Q ss_pred ccccccCCCCC-chhhH---Hhhhc
Q psy17854 159 SRAIRQAKDER-TFHIF---YQILA 179 (181)
Q Consensus 159 sRv~~~~~~er-nfhiF---y~ll~ 179 (181)
-|+.+++.+-| .|.-| |++|.
T Consensus 662 IRIsraGFP~R~~f~EFv~RY~IL~ 686 (1463)
T COG5022 662 IRISRAGFPSRWTFDEFVQRYRILS 686 (1463)
T ss_pred eeeccccCchhhhHHHHHHHHHHhc
Confidence 99999998888 66665 55554
No 31
>smart00242 MYSc Myosin. Large ATPases. ATPase; molecular motor. Muscle contraction consists of a cyclical interaction between myosin and actin. The core of the myosin structure is similar in fold to that of kinesin.
Probab=98.95 E-value=1.2e-10 Score=106.09 Aligned_cols=149 Identities=22% Similarity=0.257 Sum_probs=107.7
Q ss_pred hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchh--hH
Q psy17854 27 QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIG--EL 104 (181)
Q Consensus 27 ~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~--~v 104 (181)
.+++...+ ++...+..|....+..|.|+||||+|.|.+.||++||+|..++++..++..|.+++++.+|...... ..
T Consensus 463 ~~kl~~~~-~~~~~~~~~~~~~~~~F~I~H~AG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~ 541 (677)
T smart00242 463 LEKLNQTH-EKHPHFSKPRKKGRTEFIIKHYAGDVTYDVTGFLEKNKDTLFKDLIELLQSSKNPLIASLFPSGESNAGSK 541 (677)
T ss_pred HHHHHHHh-cCCCCccCCCCCCCCeEEEEecceeEeecCccHHHHccchhhHHHHHHHHhCCcHHHHHHhcccccccccc
Confidence 44455555 4455777886556668999999999999999999999999999999999999999999999754321 11
Q ss_pred HHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC-Ccccceeee-----eEeeccccccccCCCCC-chhhHHh
Q psy17854 105 EQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS-GYIAGANIE-----TYLLEKSRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 105 ~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~-~~~~g~~~~-----~~lleksRv~~~~~~er-nfhiFy~ 176 (181)
...-+.+..+..+.....+.++...++|.|||+++-.+. +......+. ..+||-.|+-+..-..| .|.-|+.
T Consensus 542 ~~~~tv~~~fk~~L~~L~~~l~~t~~hfIRCIKPN~~k~~~~Fd~~~V~~QLr~~Gvle~iri~r~Gyp~r~~~~~F~~ 620 (677)
T smart00242 542 KRFRTVGSQFKESLNKLMDTLNSTNPHFIRCIKPNEEKKPGDFDSSLVLHQLRYLGVLETIRIRRAGFPYRLPFDEFLQ 620 (677)
T ss_pred CCCCcHHHHHHHHHHHHHHHHhccCCeEEEEeCCCcccCcccccHHHHHHHHHhcccHHHHHHHHccccceecHHHHHH
Confidence 122233444555666677777888999999999976542 333333222 35688888888877776 7777653
No 32
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins. In vertebrates, myosin XV appears to be expressed in sensory tissue and play a role in hearing. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis caus
Probab=98.94 E-value=1.4e-10 Score=105.66 Aligned_cols=147 Identities=20% Similarity=0.294 Sum_probs=103.8
Q ss_pred hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchhh---
Q psy17854 27 QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIGE--- 103 (181)
Q Consensus 27 ~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~~--- 103 (181)
.+++...+ |++..+..|....+ .|+|+||||+|.|.+.||++||+|.+++++..++..|.+.+++.+|.......
T Consensus 455 ~~kl~~~~-~~~~~~~~~~~~~~-~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~~ 532 (677)
T cd01387 455 LQKCHYHH-GANPLYSKPKMPLP-EFTIKHYAGKVTYQVHKFLDKNHDQVRQDVLDLFVSSRTRVVAHLFSSHAAQRAPK 532 (677)
T ss_pred HHHHHHhc-cCCccccCCCCCCC-eeEEEEeCceeeecCCChHHhccchhhHHHHHHHHhCCcHHHHHHHhhhhcccccc
Confidence 34455555 55566777765555 89999999999999999999999999999999999999999999986421100
Q ss_pred ----------HHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC-Ccccceeee-----eEeeccccccccCCC
Q psy17854 104 ----------LEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS-GYIAGANIE-----TYLLEKSRAIRQAKD 167 (181)
Q Consensus 104 ----------v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~-~~~~g~~~~-----~~lleksRv~~~~~~ 167 (181)
.......+.....+.....+.+|...++|.|||.+.-.+. +......+. ..+||--|+.+..-.
T Consensus 533 ~~~~~s~~~~~~~~~tv~~~f~~sL~~L~~~l~~t~phfIRCIKPN~~k~~~~Fd~~~V~~QLr~~GvlE~vri~r~Gyp 612 (677)
T cd01387 533 RLGKSSSGTRLYKAHTVAAKFQQSLLDLVEKMERCNPLFVRCLKPNHKKEPGLFEPDVVMAQLRYSGVLETVRIRKEGFP 612 (677)
T ss_pred cccCCCccccccCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCCcCCccccChHHHHHHHHHhchHHHHHHHHccCC
Confidence 0011233344455666777788889999999999977542 222222222 246888888887777
Q ss_pred CC-chhhHH
Q psy17854 168 ER-TFHIFY 175 (181)
Q Consensus 168 er-nfhiFy 175 (181)
.| .|.-|+
T Consensus 613 ~r~~~~~F~ 621 (677)
T cd01387 613 VRLPFQHFI 621 (677)
T ss_pred ccccHHHHH
Confidence 76 665554
No 33
>cd00124 MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the fila
Probab=98.92 E-value=1.8e-10 Score=105.11 Aligned_cols=150 Identities=21% Similarity=0.278 Sum_probs=106.2
Q ss_pred hhhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccch----
Q psy17854 26 PQERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEI---- 101 (181)
Q Consensus 26 l~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~---- 101 (181)
|.+++...+.++. .+..|....+..|+|+||||+|.|.+.||++||+|.+++++..++..|.+++++.+|.....
T Consensus 455 ~~~kl~~~~~~~~-~~~~~~~~~~~~F~I~HyAG~V~Y~v~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~ 533 (679)
T cd00124 455 FLEKLNNKLKSNN-AFYPAKKNAPTEFTIKHYAGDVTYDARGFLEKNKDVLSPELVSLLKSSSNPFIRELFESELSKTGN 533 (679)
T ss_pred HHHHHHHHhcCCc-ccccCCCCCCCceEEEeeceeEEecCCCHHHhcCCcccHHHHHHHHhCCcHHHHHHhccccccccc
Confidence 4555666665443 33333344445899999999999999999999999999999999999999999999875311
Q ss_pred ---------hhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC-CCcccceeee-----eEeeccccccccCC
Q psy17854 102 ---------GELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA-SGYIAGANIE-----TYLLEKSRAIRQAK 166 (181)
Q Consensus 102 ---------~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~-~~~~~g~~~~-----~~lleksRv~~~~~ 166 (181)
.........+..+..+.....+.++...++|.|||.++-.+ -+......+. ..+||--|+.+..-
T Consensus 534 ~~~~~~~~~~~~~~~~tv~~~f~~qL~~L~~~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~irirr~Gy 613 (679)
T cd00124 534 SSTGSTSSKGKKKKGQTVGSQFRTSLDALMATLNSTEPHFIRCIKPNEEKKPNAFDSGKVLQQLRYLGILETIRIRRLGF 613 (679)
T ss_pred cccccccccccccCCCcHHHHHHHHHHHHHHHHhcCCCeEEEEECCCcccCCCccChHHHHHHHHHhchHHHHHHHHccC
Confidence 01112234444555666677777888899999999998754 2333333333 25688888888877
Q ss_pred CCC-chhhHHh
Q psy17854 167 DER-TFHIFYQ 176 (181)
Q Consensus 167 ~er-nfhiFy~ 176 (181)
..| .|.-|+.
T Consensus 614 p~R~~~~eF~~ 624 (679)
T cd00124 614 SVRIPFDEFLS 624 (679)
T ss_pred CceeeHHHHHH
Confidence 777 6776653
No 34
>cd01377 MYSc_type_II Myosin motor domain, type II myosins. Myosin II mediates cortical contraction in cell motility, and is the motor in smooth and skeletal muscle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydro
Probab=98.87 E-value=4.1e-10 Score=102.85 Aligned_cols=151 Identities=26% Similarity=0.274 Sum_probs=104.8
Q ss_pred hhhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchh---
Q psy17854 26 PQERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIG--- 102 (181)
Q Consensus 26 l~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~--- 102 (181)
|.+++...+.++......+....+..|.|+||||+|.|.+.||++||+|.+.+++..++..|.+++++.+|......
T Consensus 468 ~~~kl~~~~~~~~~~~~~~~~~~~~~F~I~HyAG~V~Y~~~gfleKN~D~l~~~~~~ll~~S~~~~i~~lf~~~~~~~~~ 547 (693)
T cd01377 468 FVEKLYDNHLGKSKFKKPKKGKAKAHFSLVHYAGTVDYNIDGWLEKNKDPLNDNVVGLLKKSSDKLVAELFKDYAEASGD 547 (693)
T ss_pred HHHHHHHHhcCCCcccccCCCCCCCcEEEEeeceeEeeccccHHHhccccccHHHHHHHHhCchHHHHHHhhhhcccccc
Confidence 34556666765543312222333348999999999999999999999999999999999999999999998743211
Q ss_pred -------hH--HHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC-CCcccceeee-----eEeeccccccccCCC
Q psy17854 103 -------EL--EQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA-SGYIAGANIE-----TYLLEKSRAIRQAKD 167 (181)
Q Consensus 103 -------~v--~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~-~~~~~g~~~~-----~~lleksRv~~~~~~ 167 (181)
+. ....+.+..+..+.....+.++...++|.|||.+.-.+ -+......+. ..+||--||-+..-.
T Consensus 548 ~~~~~~~~~~~~~~~tv~~~F~~qL~~L~~~L~~t~~hfIRCIKPN~~k~p~~Fd~~~V~~QLr~~GvlEtvrirr~Gyp 627 (693)
T cd01377 548 GGGGGGKKKKGGSFRTVSQLYKEQLNKLMTTLRSTNPHFVRCIIPNEEKKPGKLDAHLVLDQLRCNGVLEGIRICRKGFP 627 (693)
T ss_pred cccccCCCCcCCccccHHHHHHHHHHHHHHHHhccCCeEEEEeCcCccCCCCccCHHHHHHHHHhcchHHHHHHHHcCCC
Confidence 00 01123344455566677777888899999999997654 2333333222 256888888888777
Q ss_pred CC-chhhHHh
Q psy17854 168 ER-TFHIFYQ 176 (181)
Q Consensus 168 er-nfhiFy~ 176 (181)
.| .|.-|+.
T Consensus 628 ~R~~f~~F~~ 637 (693)
T cd01377 628 NRILYAEFRQ 637 (693)
T ss_pred ccccHHHHHH
Confidence 77 7777743
No 35
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins. Myosin VI is a monomeric myosin, which moves towards the minus-end of actin filaments, in contrast to most other myosins. It has been implicated in endocytosis, secretion, and cell migration. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the minus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of
Probab=98.85 E-value=3.8e-10 Score=103.34 Aligned_cols=125 Identities=18% Similarity=0.215 Sum_probs=94.0
Q ss_pred cccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchhh----H---HHHhhhhhhHHHhhccccc
Q psy17854 51 LKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIGE----L---EQQLLQANPILEAFGNAKT 123 (181)
Q Consensus 51 ~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~~----v---~~~i~~~~~iLeafgna~T 123 (181)
.|+|+||||+|.|.+.||++||+|.+.+++..++..|.+++++.+|....... . ....+.+..+..+.....+
T Consensus 523 ~F~I~HyAG~V~Y~v~gfleKNkD~l~~~~~~ll~~S~n~~i~~lf~~~~~~~~~~~~~~k~~~~tv~~~fk~qL~~Lm~ 602 (717)
T cd01382 523 GFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESKDKFLRSLFESSTNNNDTKQKAGKLSFISVGNKFKTQLNLLLE 602 (717)
T ss_pred CEEEEecceeEeecCCChHHhcCccccHHHHHHHHhCchHHHHHHhccccccccccccccCccCccHHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999997542210 0 0122344455566777788
Q ss_pred cccCCCCcceeEEEEEecCC-Ccccceeee-----eEeeccccccccCCCCC-chhhHH
Q psy17854 124 VKNDNSSRFGKFIRINFDAS-GYIAGANIE-----TYLLEKSRAIRQAKDER-TFHIFY 175 (181)
Q Consensus 124 ~~N~nssrfg~~~~l~f~~~-~~~~g~~~~-----~~lleksRv~~~~~~er-nfhiFy 175 (181)
.+|...++|.|||.+.-.+. +......+. ..+||--||.+..-..| .|.-||
T Consensus 603 ~L~~t~~hfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvLE~vri~r~Gyp~R~~f~~F~ 661 (717)
T cd01382 603 KLRSTGSSFIRCIKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELY 661 (717)
T ss_pred HHhccCCeeeeeeCCCcccCCCCCChHHHHHHHHhcchHHHHHHHHccCchhhhHHHHH
Confidence 88899999999999976532 333333222 25688888888887777 676664
No 36
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates f
Probab=98.84 E-value=2.8e-10 Score=103.58 Aligned_cols=146 Identities=16% Similarity=0.128 Sum_probs=101.0
Q ss_pred hhhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCcccccccccc-----c
Q psy17854 26 PQERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDA-----E 100 (181)
Q Consensus 26 l~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~-----~ 100 (181)
|.+++...+ +++..+..|. +..|.|+||||+|.|.+.||++||+|.+++++..++.+|.++++. +|... .
T Consensus 458 f~~kl~~~~-~~~~~~~~~~---~~~F~I~HyAG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~~~~~~-~f~~~~~~~s~ 532 (677)
T cd01383 458 FANKLKQHL-KTNSCFRGER---GGAFTVRHYAGEVTYDTTGFLEKNRDLLHSDSIQLLSSCKCQLPQ-LFASSMLIQSP 532 (677)
T ss_pred HHHHHHHHh-CCCCCCCCCC---CCceEEEEeccceeecCCChHHhccccccHHHHHHHHhCchHHHH-HHHhhhhcccc
Confidence 345555444 3344455443 347999999999999999999999999999999999999887665 33211 0
Q ss_pred --------hhhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCC-Ccccceeee-----eEeeccccccccCC
Q psy17854 101 --------IGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDAS-GYIAGANIE-----TYLLEKSRAIRQAK 166 (181)
Q Consensus 101 --------~~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~-~~~~g~~~~-----~~lleksRv~~~~~ 166 (181)
........+.+..+..+.....+.+|...++|.|||.+.-.+. +......+. ..+||-.||.+.+-
T Consensus 533 ~~~~~~~~~~~~~~~~tv~~~fk~qL~~L~~~L~~t~phfIRCIKPN~~k~p~~fd~~~V~~QLr~~GvlE~iri~r~Gy 612 (677)
T cd01383 533 VVGPLYVASAADSQKLSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNNKQLPGIYEQGLVLQQLRCCGVLEVVRISRSGY 612 (677)
T ss_pred ccccccccccccccCcchHHHHHHHHHHHHHHHhCCCCeEEEEECcccccCcCccchhhhHHHhhhccHHHHHHHHhcCC
Confidence 0001123344455566777788888999999999999976532 333333333 25689999998888
Q ss_pred CCC-chhhHHh
Q psy17854 167 DER-TFHIFYQ 176 (181)
Q Consensus 167 ~er-nfhiFy~ 176 (181)
..| .|.-|+.
T Consensus 613 p~R~~~~~F~~ 623 (677)
T cd01383 613 PTRMTHQEFAR 623 (677)
T ss_pred CccccHHHHHH
Confidence 887 7777754
No 37
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the
Probab=98.71 E-value=3.2e-09 Score=97.81 Aligned_cols=161 Identities=14% Similarity=0.040 Sum_probs=106.1
Q ss_pred ccccCCCcchhh--------hhhhhhccCCCCeeEeCCC-----CCCCCcccccccCC--CccchhhhhHHHhcCCC-cc
Q psy17854 15 TRYDRMHNRAKP--------QERKNSRRDGPSLLFVTPG-----SPVPVLKGLKTAIE--PVDYSAEKWLMKNMDPL-NE 78 (181)
Q Consensus 15 ~~l~~l~e~~~l--------~~~~~~t~~G~~li~vNP~-----~~~p~~f~i~h~ag--ph~Y~va~~~~kn~d~~-~~ 78 (181)
-.|+-|.|++.+ .++++..+.++ ..+..+. ...+..|.|+|||| ||.|.+.||++||+|.. ..
T Consensus 468 GIl~lLDEec~~p~~tD~~f~~kl~~~~~~~-~~~~~~~~~~~~~~~~~~F~I~HyAG~~~V~Y~~~gfleKNkD~~~~~ 546 (767)
T cd01386 468 GLLWLLDEEALVPGSSDDTFLERLFAAYGDR-ETRETGLSRLRTCEGPLQFVLFHLLGTNPVLYDVTGWLRRAKPNPAAL 546 (767)
T ss_pred chhhhhhHhhcCCCCcHHHHHHHHHHHhccC-CCcccCccccccCCCCCcEEEEEcCCCCceEecCCCHHHhcCCCCChH
Confidence 345555666655 44555555333 3333311 12234799999999 69999999999999964 57
Q ss_pred chhhhhhccCCccccccccccchh------------h-----H------H----------HHhhhhhhHHHhhccccccc
Q psy17854 79 NVVSLLQVSQDPFVAHIWKDAEIG------------E-----L------E----------QQLLQANPILEAFGNAKTVK 125 (181)
Q Consensus 79 ~~~~ll~~S~~~~l~~l~~~~~~~------------~-----v------~----------~~i~~~~~iLeafgna~T~~ 125 (181)
++..++..|.++++..+|...... . . . ++-..+..+..+.....+.+
T Consensus 547 ~~~~ll~~S~~~~i~~lF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~tv~~qFk~qL~~Lm~~L 626 (767)
T cd01386 547 NAPQLLQDSKREEINSLFQGRAGLAPVCLGAGAGLEGTSQQALRRSSSIRRTFTSSTAAVKRKSPCVQVKLQVDALIDTL 626 (767)
T ss_pred HHHHHHHhCCcHHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 888899999999999998532100 0 0 0 00122344566778888999
Q ss_pred cCCCCcceeEEEEEecCC-C----------------------cccceeee-----eEeeccccccccCCCCC-chhhHHh
Q psy17854 126 NDNSSRFGKFIRINFDAS-G----------------------YIAGANIE-----TYLLEKSRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 126 N~nssrfg~~~~l~f~~~-~----------------------~~~g~~~~-----~~lleksRv~~~~~~er-nfhiFy~ 176 (181)
|...++|.|||++.-.+. + .+....+. ..+||--||.+..-..| .|.-|+.
T Consensus 627 ~~t~phfIRCIKPN~~k~~~~~~~~~~~~~~~~~~~~~~~p~~fd~~~V~~QLr~~GvlE~iri~r~Gfp~R~~~~~F~~ 706 (767)
T cd01386 627 RRSGLHFVHCYLPQHNGGKAMARTASPSPQQSEDNGVAAEPLALDIPLLRSQLRGSQILEAARLHRLGFPISVPLGEFVR 706 (767)
T ss_pred hccCCeeEEEeCccccccccccccccccccccccccccccccccCHHHHHHHHHhcccHHHHHHHhcCCcccccHHHHHH
Confidence 999999999999977542 1 11111111 35799999999888887 7777754
No 38
>cd01379 MYSc_type_III Myosin motor domain, type III myosins. Myosin III has been shown to play a role in the vision process in insects and in hearing in mammals. Myosin III, an unconventional myosin, does not form dimers. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the
Probab=98.67 E-value=5.7e-09 Score=94.77 Aligned_cols=126 Identities=25% Similarity=0.222 Sum_probs=88.7
Q ss_pred hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchhhHHH
Q psy17854 27 QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIGELEQ 106 (181)
Q Consensus 27 ~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~~v~~ 106 (181)
.+++...+.++ .+..|....+ .|+|+||||+|.|.+.||++||+|.+++++..++..|.
T Consensus 467 ~~kl~~~~~~~--~~~~~~~~~~-~F~I~HyAG~V~Y~~~gfleKNkD~l~~~~~~ll~~S~------------------ 525 (653)
T cd01379 467 VEKFEDNLKSK--FFWRPKRVEL-SFGIHHYAGKVLYNASGFLEKNRDFLPADIVLLLRSSQ------------------ 525 (653)
T ss_pred HHHHHHhcCCC--CccCCCCCCC-ceEEEEeceeEeecCCCHHHhccccccHHHHHHHHhCc------------------
Confidence 33444444333 4566765444 89999999999999999999999999999998888770
Q ss_pred HhhhhhhHHHhhccccccccCCCCcceeEEEEEecC-CCcccceeee-----eEeeccccccccCCCCC-chhhHH
Q psy17854 107 QLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA-SGYIAGANIE-----TYLLEKSRAIRQAKDER-TFHIFY 175 (181)
Q Consensus 107 ~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~-~~~~~g~~~~-----~~lleksRv~~~~~~er-nfhiFy 175 (181)
..+..+..++....+.+|...++|.|||++.-.+ -+......+. ..+||--||.+..-..| .|.-|+
T Consensus 526 --tv~~~fr~~l~~L~~~l~~t~~hfIRCIKPN~~k~~~~fd~~~V~~QLr~~GvlE~iri~r~Gyp~r~~~~~F~ 599 (653)
T cd01379 526 --TVASYFRYSLMDLLSKMVVGQPHFVRCIKPNEDRQAKKFDAEKVLKQLRYTGILETARIRRQGFSHRILFANFI 599 (653)
T ss_pred --HHHHHHHHHHHHHHHHHhccCCceEEeeCCCcccCccccCHHHHHHHHHHcchHHHHHHHHcCCCccccHHHHH
Confidence 1122333444555666666789999999997764 3333333333 25689889988887777 777773
No 39
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril. Myosin is a major component of thick filaments and exists as a hexamer of 2 heavy chains [], 2 alkali light chains, and 2 regulatory light chains. The heavy chain can be subdivided into the N-terminal globular head and the C-terminal coiled-coil rod-like tail, although some forms have a globular region in their C-terminal. There are many cell-specific isoforms of myosin heavy chains, coded for by a multi-gene family []. Myosin interacts with actin to convert chemical energy, in the form of ATP, to mechanical energy []. The 3-D structure of the head portion of myosin has been determined [] and a model for actin-myosin complex has been constructed []. The globular head is well conserved, some highly-conserved regions possibly relating to functional and structural domains []. The rod-like tail starts with an invariant proline residue, and contains many repeats of a 28 residue region, interrupted at 4 regularly-spaced points known as skip residues. Although the sequence of the tail is not well conserved, the chemical character is, hydrophobic, charged and skip residues occuring in a highly ordered and repeated fashion [].; GO: 0003774 motor activity, 0005524 ATP binding, 0016459 myosin complex; PDB: 1LKX_A 2V26_A 2BKI_A 3L9I_A 2BKH_A 2X51_A 2VB6_A 2VAS_A 1OE9_A 1W8J_A ....
Probab=98.48 E-value=1.7e-08 Score=92.40 Aligned_cols=152 Identities=24% Similarity=0.309 Sum_probs=100.8
Q ss_pred hhhhhhhhccCCCCeeEeCCC---CCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccch
Q psy17854 25 KPQERKNSRRDGPSLLFVTPG---SPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEI 101 (181)
Q Consensus 25 ~l~~~~~~t~~G~~li~vNP~---~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~ 101 (181)
.+.+++...+.+....+..|. ...+..|+|+||+|+|.|.+.||++||+|..+.++..++..|++.+++.+|.....
T Consensus 457 ~fl~kl~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKNrD~l~~~~~~ll~~S~n~~v~~lf~~~~~ 536 (689)
T PF00063_consen 457 SFLEKLLKRHSGKHPSFVKPRFSRSTSKSSFTIKHYAGDVTYDVEGFLEKNRDPLSQDFVSLLRSSTNSFVSSLFSSEAT 536 (689)
T ss_dssp HHHHHHHHHHTTTSTTEECTSSSTSSTTSCEEEEETTEEEEEE-TTHHHHHHE-S-HHHHHHHHTSSSHHHHHHTHSHHH
T ss_pred HHHHHHHhhcccCCCcccccccccccCCCceEeecccCcceeccccccccccchHHHHHHHHHHhCcCcccccccccccc
Confidence 344455566656666778883 23445899999999999999999999999999999999999999999998875431
Q ss_pred -----------------------hhHHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecC-CCcccceeeee----
Q psy17854 102 -----------------------GELEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDA-SGYIAGANIET---- 153 (181)
Q Consensus 102 -----------------------~~v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~-~~~~~g~~~~~---- 153 (181)
......-..+.....+.......++...++|.+||.+.-.+ .+.+....+..
T Consensus 537 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tv~~qf~~sL~~L~~~L~~t~~hfIrCIkPN~~~~~~~FD~~~V~~QLr~ 616 (689)
T PF00063_consen 537 ATSSSSSSLSRRSSSSSTQSRSSGSKKKKSTVSSQFRSSLDELMDTLRSTQPHFIRCIKPNDQKKPNQFDSKLVLRQLRY 616 (689)
T ss_dssp ---S-S-S-BTTTTCCCTTSSCCCGGTCSSBHHHHHHHHHHHHHHHHCTSEEEEEEEE-SSSS--TT---HHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccHHHHHhhhhhcccceEEEeccccccccccccchheehhhhh
Confidence 00111233344455666777778888899999999997753 33333332222
Q ss_pred -EeeccccccccCCCCC-chhhHHh
Q psy17854 154 -YLLEKSRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 154 -~lleksRv~~~~~~er-nfhiFy~ 176 (181)
.++|-.|+.+..-..| .|.-|..
T Consensus 617 ~gile~vri~~~Gyp~r~~~~eF~~ 641 (689)
T PF00063_consen 617 SGILETVRIRRQGYPVRLTFDEFLR 641 (689)
T ss_dssp TTHHHHHHHHHCSSSEEEEHHHHHH
T ss_pred hhhhhhhhhhhcccceecchhhhhh
Confidence 3567777766666665 6666643
No 40
>KOG0164|consensus
Probab=98.27 E-value=1.2e-07 Score=84.91 Aligned_cols=124 Identities=18% Similarity=0.246 Sum_probs=87.8
Q ss_pred cccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchhh--HHHHhhhhhhH-HHhhccccccccC
Q psy17854 51 LKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIGE--LEQQLLQANPI-LEAFGNAKTVKND 127 (181)
Q Consensus 51 ~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~~--v~~~i~~~~~i-Leafgna~T~~N~ 127 (181)
.|.|.||||.|+|++.||.+||.|.+.+|...+|..|.+++++.+|+++.... +.++.+.+.+. -.+.......+-.
T Consensus 499 ~Fri~HYAG~V~YsV~gFidKN~D~Lf~dlk~~m~~s~~~~l~~~fpeG~~~~~~~tkRP~Tagt~Fk~Sm~~Lv~nL~s 578 (1001)
T KOG0164|consen 499 DFRITHYAGDVTYSVEGFIDKNNDLLFQDLKRLMYNSKNPLLKSLFPEGNPDIAEVTKRPPTAGTLFKNSMAALVKNLAS 578 (1001)
T ss_pred ceeEEEeccceEEEEEeeeccCccHHHHHHHHHHHhcCCchHHHhCCCCChhHHhhhcCCCcHHHHHHHHHHHHHHHHhh
Confidence 68899999999999999999999999999999999999999999999765533 32333333222 2222222222223
Q ss_pred CCCcceeEEEEEec-CCCcccceeeee-----EeeccccccccCCCCC-chhhH
Q psy17854 128 NSSRFGKFIRINFD-ASGYIAGANIET-----YLLEKSRAIRQAKDER-TFHIF 174 (181)
Q Consensus 128 nssrfg~~~~l~f~-~~~~~~g~~~~~-----~lleksRv~~~~~~er-nfhiF 174 (181)
..+.+.||+.+... ..|+...-.+.+ .|||.-||-+-....| -|--|
T Consensus 579 KeP~YvRcikPNe~k~~~~fd~e~~~hqv~ylGLleNvrVrrAgfahRq~Y~~F 632 (1001)
T KOG0164|consen 579 KEPNYVRCIKPNEHKQPGQFDEERVRHQVRYLGLLENVRVRRAGFAHRQPYERF 632 (1001)
T ss_pred cCCCeEEeeccccccCccccchhhhHHHHHHHHHHhhhhhhhcccccccchHHH
Confidence 35779999998765 445555544443 3799999988777666 45444
No 41
>KOG0162|consensus
Probab=97.94 E-value=3.2e-06 Score=76.25 Aligned_cols=117 Identities=22% Similarity=0.266 Sum_probs=83.0
Q ss_pred cccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccch-------hhH-HHHhhhhhhHHHhhcccc
Q psy17854 51 LKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEI-------GEL-EQQLLQANPILEAFGNAK 122 (181)
Q Consensus 51 ~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~-------~~v-~~~i~~~~~iLeafgna~ 122 (181)
.|-|+||||.|.|++.|+++||+|.+..|++.||..|..+|++.+|++... ... .+-..++|.+.|.+-.|
T Consensus 501 ~FvIkHYAGdVtYdi~G~~drNrD~L~~DlieLm~ts~~~Fl~slFPe~v~~dskrRP~Tag~kIkkqANdLVeTLmKc- 579 (1106)
T KOG0162|consen 501 GFVIKHYAGDVTYDIDGFCDRNRDVLFKDLIELMQTSENPFLKSLFPENVDADSKRRPPTAGDKIKKQANDLVETLMKC- 579 (1106)
T ss_pred ceEEEEeccceeeecccccccchhHHHHHHHHHHhccchHHHHHhCchhhcccccCCCCCchhhHHhhHHHHHHHHHhc-
Confidence 677999999999999999999999999999999999999999999995422 122 23456778888877644
Q ss_pred ccccCCCCcceeEEEEEecCCCc-----ccceeee-eEeeccccccccCCCCC-chhhH
Q psy17854 123 TVKNDNSSRFGKFIRINFDASGY-----IAGANIE-TYLLEKSRAIRQAKDER-TFHIF 174 (181)
Q Consensus 123 T~~N~nssrfg~~~~l~f~~~~~-----~~g~~~~-~~lleksRv~~~~~~er-nfhiF 174 (181)
.+++.|||+..-.++-. -+=..+. -.|-|.-||-+-...=| .|.=|
T Consensus 580 ------~P~YIR~IKPNeTK~pnD~ee~~V~HQveYLGLqENiRvRRAGfAYRr~F~kF 632 (1106)
T KOG0162|consen 580 ------QPHYIRCIKPNETKSPNDWEESRVKHQVEYLGLQENIRVRRAGFAYRRAFDKF 632 (1106)
T ss_pred ------CcceeEeeCCCCCCCCccHHHHHHHHHHHhcchhhheeehhhhhHHHHHHHHH
Confidence 68899999997655321 1111111 13567777765544433 44444
No 42
>KOG0160|consensus
Probab=97.87 E-value=1.1e-05 Score=74.83 Aligned_cols=150 Identities=17% Similarity=0.110 Sum_probs=105.9
Q ss_pred hhhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccch--hh
Q psy17854 26 PQERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEI--GE 103 (181)
Q Consensus 26 l~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~--~~ 103 (181)
+.++++.+..++ ..+..|...-. .|.|.||||+|.|...+|+.||+|.+......++..+...++..+++.... ..
T Consensus 460 ~a~KL~~~~~~~-~~f~kpr~~~~-~f~v~hyAg~v~y~~~~fL~knrd~v~~el~~ll~~s~~~~~~~~~~~~~~~~~~ 537 (862)
T KOG0160|consen 460 LAQKLYQTLKRN-KRFTKPRLSRT-DFRVAHYAGDVTYDTEGFLEKNRDYVSDELIDLLLASDCHFVAGLAPPLRADSSA 537 (862)
T ss_pred HHHHHHHHhccC-CccCCCCCCcC-CcccccccCccccchhhhccCCccccCHHHHhhhhhcccchHHHhccchhcchhh
Confidence 345566665533 45666655444 688999999999999999999999999999999999999999888873222 12
Q ss_pred HHHHhhhhhhHHHhhccccccccCCCCcceeEEEEEecCCC------cccceeeeeEeeccccccccCCCCC-chhhHHh
Q psy17854 104 LEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASG------YIAGANIETYLLEKSRAIRQAKDER-TFHIFYQ 176 (181)
Q Consensus 104 v~~~i~~~~~iLeafgna~T~~N~nssrfg~~~~l~f~~~~------~~~g~~~~~~lleksRv~~~~~~er-nfhiFy~ 176 (181)
..++.....-...+.-+....+|....+|++|+...-.+-. .+..--=.+..||--|+.......| .|.-|+.
T Consensus 538 ~~~~~tv~s~fk~~l~~Lm~~l~~t~phyircikPn~~~~p~~fe~~~v~~Qlr~~GvLetiRiS~~g~P~r~~~~Ef~~ 617 (862)
T KOG0160|consen 538 KSKRSTVGSQFKLQLISLMETLNSTPPHYIRCIKPNAEKKPQIFENNLVLQQLRCCGVLETIRISCAGFPTRWTFIEFVN 617 (862)
T ss_pred hhhcccHHHHHHHHHHHHHHHhcCCCCCCceeeCcchhcccccccccceeeeccccceehhheeccccCCccccHHHHHH
Confidence 34444555555666677788888999999999988543321 1111111235689999987776666 8887765
Q ss_pred h
Q psy17854 177 I 177 (181)
Q Consensus 177 l 177 (181)
-
T Consensus 618 r 618 (862)
T KOG0160|consen 618 R 618 (862)
T ss_pred H
Confidence 4
No 43
>KOG0163|consensus
Probab=97.16 E-value=7.6e-05 Score=67.94 Aligned_cols=89 Identities=15% Similarity=0.228 Sum_probs=66.8
Q ss_pred ccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccccchh---hHHH---HhhhhhhHHHhhccccccc
Q psy17854 52 KGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKDAEIG---ELEQ---QLLQANPILEAFGNAKTVK 125 (181)
Q Consensus 52 f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~~~~~---~v~~---~i~~~~~iLeafgna~T~~ 125 (181)
|-|+||||.|+|....|++||-|.+..+.-.|+.+|..+++..+|++..+. .... .++..+.+-..++...--+
T Consensus 578 ~liRHfAGaVCYeT~~FvEKNnD~LH~SLe~Li~es~~~ll~sLF~S~s~t~a~~~~gkL~~iSVGaKFKtQL~~LldKL 657 (1259)
T KOG0163|consen 578 FLIRHFAGAVCYETEQFVEKNNDALHNSLEGLIEESDNPLLVSLFPSGSSTSAKQTRGKLKFISVGAKFKTQLSELLDKL 657 (1259)
T ss_pred eeeeecccceeechHHHHHhccHHHHHHHHHHHHhccchHHHHHccCCCCCccccccceeeEEehhHHHHHHHHHHHHHH
Confidence 448999999999999999999999999999999999999999999864221 1211 2333334444445555556
Q ss_pred cCCCCcceeEEEEEe
Q psy17854 126 NDNSSRFGKFIRINF 140 (181)
Q Consensus 126 N~nssrfg~~~~l~f 140 (181)
+.+.++|.|||.+.-
T Consensus 658 ~stGt~FiRCiKPN~ 672 (1259)
T KOG0163|consen 658 ESTGTHFIRCIKPNS 672 (1259)
T ss_pred HhcCCeeEEeecCcc
Confidence 677889999998754
No 44
>KOG4229|consensus
Probab=96.17 E-value=0.0027 Score=60.59 Aligned_cols=71 Identities=25% Similarity=0.417 Sum_probs=58.7
Q ss_pred hhhhhhccCCCCeeEeCCCCCCCCcccccccCCCccchhhhhHHHhcCCCccchhhhhhccCCccccccccc
Q psy17854 27 QERKNSRRDGPSLLFVTPGSPVPVLKGLKTAIEPVDYSAEKWLMKNMDPLNENVVSLLQVSQDPFVAHIWKD 98 (181)
Q Consensus 27 ~~~~~~t~~G~~li~vNP~~~~p~~f~i~h~agph~Y~va~~~~kn~d~~~~~~~~ll~~S~~~~l~~l~~~ 98 (181)
..+.+.++ |..-.++-|.+..+..|+|.||+|.+.|.+-++++||+|.++.|...++.+|...++..+...
T Consensus 521 ~~k~~~q~-~~~~~y~~~k~~~e~~f~I~Hyagkv~y~~~~flekNrD~~~~d~~~~~~s~~~~~~~~~~~~ 591 (1062)
T KOG4229|consen 521 LLKLNMQH-GSNNLYVFPKSRVETVFGITHYAGKVQYNIRGFLEKNRDTVRNDLVNLLRSSDESLLRQLVNG 591 (1062)
T ss_pred HHHhhhhh-hcccccccccccccceeeeeeecceehhhhhhHHHhhhhhhhhhHHhhcccccchhhcccCCC
Confidence 34455555 555678889999988999999999999999999999999999999888888877777766653
No 45
>cd01363 Motor_domain Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.
Probab=87.18 E-value=1.2 Score=34.12 Aligned_cols=39 Identities=26% Similarity=0.260 Sum_probs=29.1
Q ss_pred hhhhhhHHHhhc-cccccccCCCCcceeEEEEEecCCCcc
Q psy17854 108 LLQANPILEAFG-NAKTVKNDNSSRFGKFIRINFDASGYI 146 (181)
Q Consensus 108 i~~~~~iLeafg-na~T~~N~nssrfg~~~~l~f~~~~~~ 146 (181)
+.......+++. ++.|..|.+|||+..++++++......
T Consensus 58 ~~~ll~~g~~~R~~~~t~~N~~SSRsH~i~~i~v~~~~~~ 97 (186)
T cd01363 58 VIDLMDKGNANRTTAATAMNEHSSRSHSVFRIHFGGKNAL 97 (186)
T ss_pred HHHHHhhccccccccccCCCCccCcccEEEEEEEEEeecC
Confidence 344444445566 899999999999999999999754443
No 46
>PF08248 Tryp_FSAP: Tryptophyllin-3 skin active peptide; InterPro: IPR013266 PdT-3 or Tryptophyllin-3 peptide is a subfamily of the family Tryptophyllin and of the superfamily FSAP (Frog Skin Active Peptide). Originally identified in skin extracts of Neotropical leaf frogs, Phyllomedusa sp. This subfamily has an average length of 13 amino acids. The pharmacological activity of the tryptophyllins remains to be established [] but it seems that these peptides possess an action on liver protein synthesis and body weight []. It is thought to possesses insulin-releasing activity [].
Probab=25.83 E-value=45 Score=13.90 Aligned_cols=9 Identities=33% Similarity=0.582 Sum_probs=5.7
Q ss_pred CCCCCCCCc
Q psy17854 43 TPGSPVPVL 51 (181)
Q Consensus 43 NP~~~~p~~ 51 (181)
+||.+.|+|
T Consensus 2 kpfw~ppiy 10 (12)
T PF08248_consen 2 KPFWPPPIY 10 (12)
T ss_pred CccCCCCcc
Confidence 577777643
No 47
>PF02526 GBP_repeat: Glycophorin-binding protein; InterPro: IPR003681 The glycophorin-binding protein contains a tandem repeat. The repeated sequence determines the binding domain for an erythrocyte receptor binding protein of Plasmodium falciparum, the malarial parasite []. Erythrocyte invasion by the malarial merozoite is a receptor-mediated process, an obligatory step in the development of the parasite. The P. falciparum protein binds to the erythrocyte receptor glycophorin.
Probab=22.19 E-value=53 Score=18.18 Aligned_cols=11 Identities=36% Similarity=0.833 Sum_probs=7.8
Q ss_pred chhhHHhhhcC
Q psy17854 170 TFHIFYQILAG 180 (181)
Q Consensus 170 nfhiFy~ll~g 180 (181)
.-+||||+|..
T Consensus 22 h~~v~yqil~~ 32 (38)
T PF02526_consen 22 HLNVLYQILTN 32 (38)
T ss_pred HHHHHHHHHcc
Confidence 45788888764
Done!