Your job contains 1 sequence.
>psy17858
MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDN
MRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEV
TKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17858
(157 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1308043 - symbol:Bms1 "BMS1 homolog, ribosome assembl... 478 1.6e-45 1
UNIPROTKB|F1RG23 - symbol:BMS1 "Uncharacterized protein" ... 477 2.1e-45 1
UNIPROTKB|F1PKN2 - symbol:BMS1 "Uncharacterized protein" ... 483 9.2e-45 1
UNIPROTKB|E1BPP2 - symbol:BMS1 "Uncharacterized protein" ... 483 9.2e-45 1
UNIPROTKB|Q14692 - symbol:BMS1 "Ribosome biogenesis prote... 480 1.9e-44 1
UNIPROTKB|E9PTV4 - symbol:Bms1 "Protein Bms1" species:101... 478 3.1e-44 1
UNIPROTKB|F1NH69 - symbol:BMS1 "Uncharacterized protein" ... 475 6.8e-44 1
FB|FBgn0036686 - symbol:CG7728 species:7227 "Drosophila m... 471 1.4e-43 1
WB|WBGene00022021 - symbol:Y61A9LA.10 species:6239 "Caeno... 464 6.4e-43 1
ASPGD|ASPL0000005995 - symbol:AN6334 species:162425 "Emer... 456 5.9e-42 1
TAIR|locus:2033050 - symbol:AT1G06720 species:3702 "Arabi... 452 1.5e-41 1
ZFIN|ZDB-GENE-060720-2 - symbol:bms1l "BMS1-like, ribosom... 437 6.8e-40 1
POMBASE|SPBC31E1.06 - symbol:bms1 "GTP binding protein Bm... 422 2.3e-38 1
CGD|CAL0002359 - symbol:BMS1 species:5476 "Candida albica... 405 1.8e-36 1
UNIPROTKB|Q5A9Y0 - symbol:BMS1 "Putative uncharacterized ... 405 1.8e-36 1
SGD|S000006138 - symbol:BMS1 "GTPase required for ribosom... 402 3.6e-36 1
DICTYBASE|DDB_G0287891 - symbol:bms1l "BMS1-like ribosome... 402 3.7e-36 1
GENEDB_PFALCIPARUM|PFA0330w - symbol:AARP2 "pfAARP2 prote... 365 4.4e-32 1
UNIPROTKB|Q8I275 - symbol:AARP2 "PfAARP2 protein" species... 365 4.4e-32 1
DICTYBASE|DDB_G0278331 - symbol:DDB_G0278331 "Pre-rRNA-pr... 146 4.7e-09 1
UNIPROTKB|Q5XGY1 - symbol:tsr1 "Pre-rRNA-processing prote... 144 7.5e-09 1
FB|FBgn0037073 - symbol:CG7338 species:7227 "Drosophila m... 143 9.6e-09 1
UNIPROTKB|Q5R434 - symbol:TSR1 "Pre-rRNA-processing prote... 126 1.5e-08 2
UNIPROTKB|Q2NL82 - symbol:TSR1 "Pre-rRNA-processing prote... 127 1.9e-08 2
ZFIN|ZDB-GENE-030131-3762 - symbol:tsr1 "TSR1, 20S rRNA a... 139 2.7e-08 1
UNIPROTKB|E2QYA6 - symbol:E2QYA6 "Uncharacterized protein... 136 4.0e-08 1
UNIPROTKB|J9NS98 - symbol:TSR1 "Uncharacterized protein" ... 136 5.3e-08 1
UNIPROTKB|F1NNP8 - symbol:LOC100857289 "Uncharacterized p... 136 5.3e-08 1
UNIPROTKB|F1PXP0 - symbol:F1PXP0 "Uncharacterized protein... 133 9.7e-08 1
MGI|MGI:2144566 - symbol:Tsr1 "TSR1 20S rRNA accumulation... 119 1.7e-07 2
POMBASE|SPAC23H4.15 - symbol:SPAC23H4.15 "ribosome biogen... 129 2.9e-07 1
UNIPROTKB|F1MSR6 - symbol:TSR1 "Uncharacterized protein" ... 129 3.0e-07 1
RGD|2322150 - symbol:Tsr1 "TSR1, 20S rRNA accumulation, h... 128 3.8e-07 1
WB|WBGene00006497 - symbol:tag-151 species:6239 "Caenorha... 126 6.0e-07 1
UNIPROTKB|Q19329 - symbol:tag-151 "Pre-rRNA-processing pr... 126 6.0e-07 1
UNIPROTKB|Q61WR2 - symbol:tag-151 "Pre-rRNA-processing pr... 120 2.7e-06 1
TAIR|locus:2035893 - symbol:AT1G42440 "AT1G42440" species... 118 4.4e-06 1
>RGD|1308043 [details] [associations]
symbol:Bms1 "BMS1 homolog, ribosome assembly protein (yeast)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1308043
InterPro:IPR007034 Pfam:PF04950 IPI:IPI00358418 EMBL:BC092659
UniGene:Rn.41094 STRING:Q561Z9 UCSC:RGD:1308043
Genevestigator:Q561Z9 Uniprot:Q561Z9
Length = 392
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 88/136 (64%), Positives = 107/136 (78%)
Query: 20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
Q R+KKHRWY KILKS +PVI SVGWRRFQT+P+Y ++ N R R+LKYTPQH+ C A F
Sbjct: 35 QMRLKKHRWYKKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATF 94
Query: 80 WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
WGPIT GTGFLA+Q V+ P FR+ ATG +LD +++ ++ KKLKLTG P KI+K T+F
Sbjct: 95 WGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSF 154
Query: 140 IKDMFNSTLEVAKFEG 155
IK MFNS LEVAKFEG
Sbjct: 155 IKGMFNSALEVAKFEG 170
>UNIPROTKB|F1RG23 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] GO:GO:0005634
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:CU407077 Ensembl:ENSSSCT00000011164 OMA:DIAFVRT Uniprot:F1RG23
Length = 399
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 90/151 (59%), Positives = 113/151 (74%)
Query: 7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
++G GN N Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y ++ N R R
Sbjct: 25 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 84
Query: 65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
+LKYTPQH+ C A FWGPIT GTGFLA+Q V+ P FR+ ATG +LD +++ ++ KKL
Sbjct: 85 LLKYTPQHMHCGATFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKL 144
Query: 125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
KLTG P KI+K T+FIK MFNS LEVA+FEG
Sbjct: 145 KLTGFPYKIFKNTSFIKGMFNSALEVARFEG 175
>UNIPROTKB|F1PKN2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 CTD:9790 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AAEX03015389 EMBL:AAEX03015390
RefSeq:XP_534956.2 Ensembl:ENSCAFT00000011417 GeneID:477760
KEGG:cfa:477760 Uniprot:F1PKN2
Length = 1287
Score = 483 (175.1 bits), Expect = 9.2e-45, P = 9.2e-45
Identities = 93/151 (61%), Positives = 113/151 (74%)
Query: 7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
++G GN N Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y ++ N R R
Sbjct: 913 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 972
Query: 65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
+LKYTPQH+ C A FWGPIT GTGFLAVQ V+ P FR+ ATG ILD +++ ++ KKL
Sbjct: 973 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSDIMPDFRIAATGVILDLDKSIKIVKKL 1032
Query: 125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct: 1033 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1063
>UNIPROTKB|E1BPP2 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:DAAA02061559 EMBL:DAAA02061560 IPI:IPI00838890
Ensembl:ENSBTAT00000048816 Uniprot:E1BPP2
Length = 1290
Score = 483 (175.1 bits), Expect = 9.2e-45, P = 9.2e-45
Identities = 92/151 (60%), Positives = 113/151 (74%)
Query: 7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
++G GN N Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y ++ N R R
Sbjct: 916 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 975
Query: 65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
+LKYTPQH+ C A FWGPIT GTGFLAVQ V+ P FR+ ATG +LD +++ ++ KKL
Sbjct: 976 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGSMPDFRIAATGVVLDLDKSIKIVKKL 1035
Query: 125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct: 1036 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1066
>UNIPROTKB|Q14692 [details] [associations]
symbol:BMS1 "Ribosome biogenesis protein BMS1 homolog"
species:9606 "Homo sapiens" [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISS;IDA] [GO:0042255 "ribosome assembly" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005524 GO:GO:0005730 GO:GO:0003924
GO:GO:0006184 eggNOG:COG5192 EMBL:D80009 EMBL:AL022344
EMBL:CH471160 EMBL:BC043345 EMBL:BC150252 IPI:IPI00006099
RefSeq:NP_055568.3 UniGene:Hs.10848 ProteinModelPortal:Q14692
SMR:Q14692 IntAct:Q14692 STRING:Q14692 PhosphoSite:Q14692
DMDM:27151474 PaxDb:Q14692 PeptideAtlas:Q14692 PRIDE:Q14692
Ensembl:ENST00000374518 GeneID:9790 KEGG:hsa:9790 UCSC:uc001jaj.3
CTD:9790 GeneCards:GC10P043277 H-InvDB:HIX0059462
H-InvDB:HIX0172328 H-InvDB:HIX0172329 HGNC:HGNC:23505 HPA:HPA036589
MIM:611448 neXtProt:NX_Q14692 PharmGKB:PA162377556
HOGENOM:HOG000166882 HOVERGEN:HBG023890 InParanoid:Q14692 KO:K14569
OMA:ASYGFEM OrthoDB:EOG4KWJS4 PhylomeDB:Q14692 ChiTaRS:BMS1
GenomeRNAi:9790 NextBio:36866 Bgee:Q14692 CleanEx:HS_BMS1
Genevestigator:Q14692 GermOnline:ENSG00000165733 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 Uniprot:Q14692
Length = 1282
Score = 480 (174.0 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 91/151 (60%), Positives = 113/151 (74%)
Query: 7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
++G GN N Q R+KKHRWY KILKS +P+I SVGWRRFQT+P+Y ++ N R R
Sbjct: 908 ILGGLGNSEGNVGYVQMRLKKHRWYKKILKSRDPIIFSVGWRRFQTIPLYYIEDHNGRQR 967
Query: 65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
+LKYTPQH+ C A FWGPIT GTGFLA+Q V+ P FR+ ATG +LD +++ ++ KKL
Sbjct: 968 LLKYTPQHMHCGAAFWGPITPQGTGFLAIQSVSGIMPDFRIAATGVVLDLDKSIKIVKKL 1027
Query: 125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct: 1028 KLTGFPYKIFKNTSFIKGMFNSALEVAKFEG 1058
>UNIPROTKB|E9PTV4 [details] [associations]
symbol:Bms1 "Protein Bms1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074774 IPI:IPI00358418
Ensembl:ENSRNOT00000008741 ArrayExpress:E9PTV4 Uniprot:E9PTV4
Length = 1282
Score = 478 (173.3 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 88/136 (64%), Positives = 107/136 (78%)
Query: 20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
Q R+KKHRWY KILKS +PVI SVGWRRFQT+P+Y ++ N R R+LKYTPQH+ C A F
Sbjct: 925 QMRLKKHRWYKKILKSRDPVIFSVGWRRFQTIPLYYIEDHNGRQRLLKYTPQHMHCGATF 984
Query: 80 WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
WGPIT GTGFLA+Q V+ P FR+ ATG +LD +++ ++ KKLKLTG P KI+K T+F
Sbjct: 985 WGPITPQGTGFLAIQSVSGAMPEFRIAATGVVLDLDKSIKIVKKLKLTGFPFKIFKNTSF 1044
Query: 140 IKDMFNSTLEVAKFEG 155
IK MFNS LEVAKFEG
Sbjct: 1045 IKGMFNSALEVAKFEG 1060
>UNIPROTKB|F1NH69 [details] [associations]
symbol:BMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:AADN02035303 EMBL:AADN02035304 IPI:IPI00604102
Ensembl:ENSGALT00000004133 Uniprot:F1NH69
Length = 1304
Score = 475 (172.3 bits), Expect = 6.8e-44, P = 6.8e-44
Identities = 90/151 (59%), Positives = 113/151 (74%)
Query: 7 LVGTTGNM--NCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYR 64
++G GN N Q R+KKHRWY KILK+ +P+I+S GWRRFQT+P++ ++ N R+R
Sbjct: 928 ILGGLGNSEGNVGYVQLRLKKHRWYKKILKTRDPLILSFGWRRFQTIPVFYIEDHNGRHR 987
Query: 65 MLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKL 124
+LKYTPQH+ C A FWGPIT GTGFLAVQ V+ P FR+ ATG +LD +++ V KKL
Sbjct: 988 LLKYTPQHMHCGATFWGPITPQGTGFLAVQSVSGTTPDFRIAATGVVLDLDKSITVVKKL 1047
Query: 125 KLTGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
KLTG P KI+K T+FIK MFNS LEVAKFEG
Sbjct: 1048 KLTGFPFKIFKNTSFIKGMFNSQLEVAKFEG 1078
>FB|FBgn0036686 [details] [associations]
symbol:CG7728 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005634
EMBL:AE014296 GO:GO:0022008 GO:GO:0042254 eggNOG:COG5192 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950
GeneTree:ENSGT00550000074774 EMBL:AY061447 RefSeq:NP_648945.1
UniGene:Dm.3597 SMR:Q9VVC9 STRING:Q9VVC9 EnsemblMetazoa:FBtr0075274
GeneID:39904 KEGG:dme:Dmel_CG7728 UCSC:CG7728-RA
FlyBase:FBgn0036686 InParanoid:Q9VVC9 OrthoDB:EOG4ZGMT9
GenomeRNAi:39904 NextBio:816019 Uniprot:Q9VVC9
Length = 1159
Score = 471 (170.9 bits), Expect = 1.4e-43, P = 1.4e-43
Identities = 90/151 (59%), Positives = 113/151 (74%)
Query: 12 GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
G +NC +VKKHRWY KILK+G+P+I+S+GWRRFQT+ IY+K EDN R R LKYTP
Sbjct: 805 GYVNC-----KVKKHRWYKKILKTGDPLIISMGWRRFQTVAIYAKVEDNFRQRYLKYTPN 859
Query: 72 HVACMAHFWGPITRSGTGFLAVQDVAK-----REPGFRVIATGTILDANQTAEVTKKLKL 126
HV C FWGPIT TGFLA+Q V + R GFR+ ATG + + ++++++ KKLKL
Sbjct: 860 HVTCSMTFWGPITPQNTGFLALQTVRQDQEEMRRLGFRIAATGCVTEVDKSSQIMKKLKL 919
Query: 127 TGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR 157
G P KIYKKTAF+KDMFNS+LEVAKFEG +
Sbjct: 920 VGHPFKIYKKTAFVKDMFNSSLEVAKFEGAK 950
>WB|WBGene00022021 [details] [associations]
symbol:Y61A9LA.10 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 GO:GO:0005525 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254
eggNOG:COG5192 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:FO081464 RefSeq:NP_504245.3 ProteinModelPortal:Q9N306
SMR:Q9N306 STRING:Q9N306 PaxDb:Q9N306 EnsemblMetazoa:Y61A9LA.10
GeneID:178851 KEGG:cel:CELE_Y61A9LA.10 UCSC:Y61A9LA.10 CTD:178851
WormBase:Y61A9LA.10 InParanoid:Q9N306 NextBio:902832 Uniprot:Q9N306
Length = 1055
Score = 464 (168.4 bits), Expect = 6.4e-43, P = 6.4e-43
Identities = 84/144 (58%), Positives = 109/144 (75%)
Query: 12 GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
G N QARVK+HRW+ + LKS +P+I+S GWRRFQT+ IYS Q+ NMR R LKYTP+
Sbjct: 689 GEQNMGVVQARVKRHRWFERTLKSRDPLIISCGWRRFQTIAIYSVQDHNMRLRFLKYTPE 748
Query: 72 HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
H+ C A F+GP+ TG LA+Q +A + PG+R++ATG +LD +++ +V KKLKL G P
Sbjct: 749 HMHCHASFFGPVCAQNTGLLAIQSIADKTPGYRIVATGGVLDLDKSTQVVKKLKLIGHPE 808
Query: 132 KIYKKTAFIKDMFNSTLEVAKFEG 155
KI+KKTAF+K MFNS LEVAKFEG
Sbjct: 809 KIFKKTAFVKGMFNSALEVAKFEG 832
>ASPGD|ASPL0000005995 [details] [associations]
symbol:AN6334 species:162425 "Emericella nidulans"
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] InterPro:IPR000795
InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142 SMART:SM00785
GO:GO:0005525 GO:GO:0005739 GO:GO:0005634 GO:GO:0003924
GO:GO:0006184 GO:GO:0042254 EMBL:AACD01000107 EMBL:BN001301
eggNOG:COG5192 GO:GO:0030686 HOGENOM:HOG000166882 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 OrthoDB:EOG4GTPN1
GO:GO:0034511 RefSeq:XP_663938.1 ProteinModelPortal:Q5AZE6
STRING:Q5AZE6 EnsemblFungi:CADANIAT00006652 GeneID:2871229
KEGG:ani:AN6334.2 Uniprot:Q5AZE6
Length = 1179
Score = 456 (165.6 bits), Expect = 5.9e-42, P = 5.9e-42
Identities = 80/136 (58%), Positives = 103/136 (75%)
Query: 20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
Q R+K+HRW+ KILKS +P+I S+GWRRFQTLP+YS ++ R RMLKYTP+H+ C F
Sbjct: 820 QVRIKRHRWHKKILKSNDPLIFSLGWRRFQTLPMYSTSDNRTRNRMLKYTPEHMHCFGTF 879
Query: 80 WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
+GP+ TGF VQ + + PGFR+ ATG +L ++ E+ KKLKLTGV KI+K TAF
Sbjct: 880 YGPLVAPNTGFCCVQSFSNKNPGFRIAATGVVLSVDEHTEIVKKLKLTGVAYKIFKNTAF 939
Query: 140 IKDMFNSTLEVAKFEG 155
IKDMFNS+LE+AKFEG
Sbjct: 940 IKDMFNSSLEIAKFEG 955
>TAIR|locus:2033050 [details] [associations]
symbol:AT1G06720 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006406 "mRNA
export from nucleus" evidence=RCA] [GO:0006606 "protein import into
nucleus" evidence=RCA] InterPro:IPR000795 InterPro:IPR012948
Pfam:PF00009 Pfam:PF08142 SMART:SM00785 GO:GO:0005525 EMBL:CP002684
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
OMA:ASYGFEM InterPro:IPR007034 Pfam:PF04950 IPI:IPI00521552
RefSeq:NP_172157.1 UniGene:At.12092 ProteinModelPortal:F4IDR3
SMR:F4IDR3 PRIDE:F4IDR3 EnsemblPlants:AT1G06720.1 GeneID:837182
KEGG:ath:AT1G06720 Uniprot:F4IDR3
Length = 1147
Score = 452 (164.2 bits), Expect = 1.5e-41, P = 1.5e-41
Identities = 77/144 (53%), Positives = 109/144 (75%)
Query: 12 GNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQ 71
G N QAR+KKHRW+ K+LK+ +P+I+S+GWRR+QT+P+++ ++ N R+RMLKYTP+
Sbjct: 785 GEDNVGYMQARLKKHRWHKKVLKTRDPIIVSIGWRRYQTIPVFAIEDRNGRHRMLKYTPE 844
Query: 72 HVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPM 131
H+ C+A FWGP+ TGF+A Q+++ + GFR+ AT +L+ N A + KK+KL G P
Sbjct: 845 HMHCLASFWGPLVPPNTGFVAFQNLSNNQAGFRITATSVVLEFNHQARIVKKIKLVGTPC 904
Query: 132 KIYKKTAFIKDMFNSTLEVAKFEG 155
KI KKTAFIKDMF S LE+A+FEG
Sbjct: 905 KIKKKTAFIKDMFTSDLEIARFEG 928
>ZFIN|ZDB-GENE-060720-2 [details] [associations]
symbol:bms1l "BMS1-like, ribosome assembly protein
(yeast)" species:7955 "Danio rerio" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 ZFIN:ZDB-GENE-060720-2 GO:GO:0005525
GO:GO:0005634 GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074774
EMBL:BX248124 IPI:IPI00919984 RefSeq:NP_001104620.2
UniGene:Dr.76844 Ensembl:ENSDART00000053761
Ensembl:ENSDART00000130032 GeneID:553241 KEGG:dre:553241 CTD:553241
NextBio:20880021 Uniprot:E7F349
Length = 1221
Score = 437 (158.9 bits), Expect = 6.8e-40, P = 6.8e-40
Identities = 80/149 (53%), Positives = 109/149 (73%)
Query: 7 LVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRML 66
L + GN+ Q R+KKHRW+ +ILK+ +P+I+S+GWRRFQT+P+Y ++ N R+R+L
Sbjct: 852 LGASEGNVGYL--QMRLKKHRWHNRILKTRDPLILSLGWRRFQTIPLYYIEDHNGRHRLL 909
Query: 67 KYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKL 126
KYTP+H+ C A WGPIT GTGFLAVQ + + FR+ ATG +LD +++ + KKLKL
Sbjct: 910 KYTPEHMHCGATIWGPITPQGTGFLAVQTIGGVKANFRIAATGVVLDLDKSVSIVKKLKL 969
Query: 127 TGVPMKIYKKTAFIKDMFNSTLEVAKFEG 155
G P KI+K T FI+ MFN+ LEVAKFEG
Sbjct: 970 IGYPYKIFKNTCFIQGMFNTILEVAKFEG 998
>POMBASE|SPBC31E1.06 [details] [associations]
symbol:bms1 "GTP binding protein Bms1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS;IDA] [GO:0005730 "nucleolus" evidence=ISS;IDA]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0042255 "ribosome assembly"
evidence=ISS] InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009
Pfam:PF08142 SMART:SM00785 PomBase:SPBC31E1.06 GO:GO:0005525
GO:GO:0005739 GO:GO:0005524 GO:GO:0005730 GO:GO:0005819
EMBL:CU329671 GO:GO:0003924 GO:GO:0006184 eggNOG:COG5192
GO:GO:0006364 HOGENOM:HOG000166882 KO:K14569 OMA:ASYGFEM
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 RefSeq:NP_595102.2
ProteinModelPortal:O94653 STRING:O94653 EnsemblFungi:SPBC31E1.06.1
GeneID:2540390 KEGG:spo:SPBC31E1.06 OrthoDB:EOG4GTPN1
NextBio:20801517 Uniprot:O94653
Length = 1121
Score = 422 (153.6 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 77/139 (55%), Positives = 103/139 (74%)
Query: 20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
Q R+K+HRW+ KILK+ +P+I S+GWRRFQ++P+YS + R RMLKYTP+H+ C F
Sbjct: 763 QVRIKRHRWHKKILKTNDPLIFSMGWRRFQSIPVYSISDSRTRNRMLKYTPEHMHCFGTF 822
Query: 80 WGPITRSGTGFLAVQDVAK---REPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKK 136
+GP +GF AVQ VA + FR+ ATG++L+ +Q+ ++ KKLKLTGVP KI+K
Sbjct: 823 YGPFVAPNSGFCAVQSVANSFAKAGSFRIAATGSVLNIDQSTDIVKKLKLTGVPYKIFKN 882
Query: 137 TAFIKDMFNSTLEVAKFEG 155
TAFIK MF+S LEVAKFEG
Sbjct: 883 TAFIKKMFSSPLEVAKFEG 901
>CGD|CAL0002359 [details] [associations]
symbol:BMS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005819 "spindle" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0034511 "U3 snoRNA binding" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 405 (147.6 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 77/137 (56%), Positives = 100/137 (72%)
Query: 21 ARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFW 80
AR+++HRW+ KILKS +P+I+S+GWRRFQTLPIY+ + R RMLKYTP+H C A F+
Sbjct: 853 ARIRRHRWHKKILKSQDPLILSLGWRRFQTLPIYTTSDSRTRNRMLKYTPEHAYCFASFY 912
Query: 81 GPITRSGTGFLAVQDV-AKREPG-FRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTA 138
GP+ T F+ V +K G FRV A+G I D N + E+ KKLKL G P KI++ TA
Sbjct: 913 GPLVAPNTTFVGFNIVDSKSTTGAFRVAASGIIEDINSSVEIVKKLKLVGYPYKIFRNTA 972
Query: 139 FIKDMFNSTLEVAKFEG 155
FIKDMF+++LEVAKFEG
Sbjct: 973 FIKDMFSNSLEVAKFEG 989
>UNIPROTKB|Q5A9Y0 [details] [associations]
symbol:BMS1 "Putative uncharacterized protein BMS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR012948 Pfam:PF00004 Pfam:PF08142
SMART:SM00382 SMART:SM00785 CGD:CAL0002359 GO:GO:0005524
GO:GO:0005634 GO:GO:0042254 GO:GO:0035690 GO:GO:0017111
eggNOG:COG5192 EMBL:AACQ01000041 EMBL:AACQ01000040 KO:K14569
InterPro:IPR007034 Pfam:PF04950 RefSeq:XP_718522.1
RefSeq:XP_718605.1 ProteinModelPortal:Q5A9Y0 STRING:Q5A9Y0
GeneID:3639801 GeneID:3639857 KEGG:cal:CaO19.10040
KEGG:cal:CaO19.2504 Uniprot:Q5A9Y0
Length = 1210
Score = 405 (147.6 bits), Expect = 1.8e-36, P = 1.8e-36
Identities = 77/137 (56%), Positives = 100/137 (72%)
Query: 21 ARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFW 80
AR+++HRW+ KILKS +P+I+S+GWRRFQTLPIY+ + R RMLKYTP+H C A F+
Sbjct: 853 ARIRRHRWHKKILKSQDPLILSLGWRRFQTLPIYTTSDSRTRNRMLKYTPEHAYCFASFY 912
Query: 81 GPITRSGTGFLAVQDV-AKREPG-FRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTA 138
GP+ T F+ V +K G FRV A+G I D N + E+ KKLKL G P KI++ TA
Sbjct: 913 GPLVAPNTTFVGFNIVDSKSTTGAFRVAASGIIEDINSSVEIVKKLKLVGYPYKIFRNTA 972
Query: 139 FIKDMFNSTLEVAKFEG 155
FIKDMF+++LEVAKFEG
Sbjct: 973 FIKDMFSNSLEVAKFEG 989
>SGD|S000006138 [details] [associations]
symbol:BMS1 "GTPase required for ribosomal subunit synthesis
and rRNA processing" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0034511 "U3 snoRNA binding" evidence=IDA] [GO:0042255 "ribosome
assembly" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IEA;IDA;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=IEA;IDA;IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 SGD:S000006138 GO:GO:0005525 GO:GO:0005739
GO:GO:0005524 GO:GO:0005730 GO:GO:0003924 EMBL:BK006949
eggNOG:COG5192 GO:GO:0030686 GO:GO:0006364 HOGENOM:HOG000166882
KO:K14569 OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
OrthoDB:EOG4GTPN1 EMBL:Z73573 PIR:S65236 RefSeq:NP_015107.1
ProteinModelPortal:Q08965 SMR:Q08965 DIP:DIP-6562N IntAct:Q08965
MINT:MINT-647500 STRING:Q08965 PaxDb:Q08965 PeptideAtlas:Q08965
PRIDE:Q08965 EnsemblFungi:YPL217C GeneID:855884 KEGG:sce:YPL217C
CYGD:YPL217c GeneTree:ENSGT00550000074774 NextBio:980544
Genevestigator:Q08965 GermOnline:YPL217C GO:GO:0034511
Uniprot:Q08965
Length = 1183
Score = 402 (146.6 bits), Expect = 3.6e-36, P = 3.6e-36
Identities = 74/138 (53%), Positives = 100/138 (72%)
Query: 20 QARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHF 79
+AR+++HRW+ KILK+ +P+++S+GWRRFQTLPIY+ + R RMLKYTP+H C A F
Sbjct: 826 KARLRRHRWHKKILKTNDPLVLSLGWRRFQTLPIYTTTDSRTRTRMLKYTPEHTYCNAAF 885
Query: 80 WGPITRSGTGFLAVQDVAKREPG--FRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKT 137
+GP+ T F VQ VA + G FR+ ATG + + + E+ KKLKL G P KI+K T
Sbjct: 886 YGPLCSPNTPFCGVQIVANSDTGNGFRIAATGIVEEIDVNIEIVKKLKLVGFPYKIFKNT 945
Query: 138 AFIKDMFNSTLEVAKFEG 155
AFIKDMF+S +EVA+FEG
Sbjct: 946 AFIKDMFSSAMEVARFEG 963
>DICTYBASE|DDB_G0287891 [details] [associations]
symbol:bms1l "BMS1-like ribosome biogenesis protein"
species:44689 "Dictyostelium discoideum" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0042255 "ribosome assembly" evidence=ISS] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 dictyBase:DDB_G0287891 GO:GO:0005525 GO:GO:0005739
GO:GO:0005730 GO:GO:0003924 GO:GO:0006184 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 eggNOG:COG5192 GO:GO:0006364 KO:K14569
OMA:ASYGFEM GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
RefSeq:XP_637074.1 ProteinModelPortal:Q54JS8 STRING:Q54JS8
EnsemblProtists:DDB0234115 GeneID:8626329 KEGG:ddi:DDB_G0287891
InParanoid:Q54JS8 ProtClustDB:CLSZ2846661 Uniprot:Q54JS8
Length = 1205
Score = 402 (146.6 bits), Expect = 3.7e-36, P = 3.7e-36
Identities = 75/133 (56%), Positives = 97/133 (72%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
+KKHRW+ +ILKS +P+++SVGWRRFQT+ +YS ++ N R RMLKYTP+H+ C A F+GP
Sbjct: 857 LKKHRWHKRILKSNDPLMISVGWRRFQTIVLYSTKDINGRNRMLKYTPEHMHCHASFYGP 916
Query: 83 ITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKD 142
+T GTGF+ + + GFRV ATGT+LD + + V KKLKL G P KI KKT F+
Sbjct: 917 LTPPGTGFIGFTNANNNQAGFRVSATGTVLDLDSSINVVKKLKLIGQPDKIMKKTCFVNG 976
Query: 143 MFNSTLEVAKFEG 155
MF S LEVAKF G
Sbjct: 977 MFTSRLEVAKFVG 989
>GENEDB_PFALCIPARUM|PFA0330w [details] [associations]
symbol:AARP2 "pfAARP2 protein" species:5833
"Plasmodium falciparum" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 365 (133.5 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 67/133 (50%), Positives = 94/133 (70%)
Query: 22 RVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQE-DNMRYRMLKYTPQHVACMAHFW 80
R+KKHRW+ K+L+S +P+I SVGWRR+Q++PIYS E +N+R R LKYT +H+ C F+
Sbjct: 1094 RIKKHRWFPKLLRSNDPLIFSVGWRRYQSIPIYSISERNNVRLRYLKYTTEHMHCNCTFY 1153
Query: 81 GPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFI 140
GP+ +G LA+ + K+ P +R+ G I++ N + KKLKL G P KI+K TAF+
Sbjct: 1154 GPLASVNSGILALYNY-KKVPFYRICINGLIIETNNNLNIMKKLKLIGEPYKIFKNTAFV 1212
Query: 141 KDMFNSTLEVAKF 153
K+MFNS LEV KF
Sbjct: 1213 KNMFNSDLEVCKF 1225
>UNIPROTKB|Q8I275 [details] [associations]
symbol:AARP2 "PfAARP2 protein" species:36329 "Plasmodium
falciparum 3D7" [GO:0005886 "plasma membrane" evidence=TAS]
InterPro:IPR000795 InterPro:IPR012948 Pfam:PF00009 Pfam:PF08142
SMART:SM00785 GO:GO:0005525 GO:GO:0005886 GO:GO:0005634
GO:GO:0003924 GO:GO:0006184 GO:GO:0042254 KO:K14569
InterPro:IPR007034 Pfam:PF04950 EMBL:AL844501
GenomeReviews:AL844501_GR RefSeq:XP_001350998.1
ProteinModelPortal:Q8I275 IntAct:Q8I275 MINT:MINT-1623490
EnsemblProtists:PFA0330w:mRNA GeneID:813203 KEGG:pfa:PFA_0330w
HOGENOM:HOG000065791 ProtClustDB:CLSZ2514882 Uniprot:Q8I275
Length = 1434
Score = 365 (133.5 bits), Expect = 4.4e-32, P = 4.4e-32
Identities = 67/133 (50%), Positives = 94/133 (70%)
Query: 22 RVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQE-DNMRYRMLKYTPQHVACMAHFW 80
R+KKHRW+ K+L+S +P+I SVGWRR+Q++PIYS E +N+R R LKYT +H+ C F+
Sbjct: 1094 RIKKHRWFPKLLRSNDPLIFSVGWRRYQSIPIYSISERNNVRLRYLKYTTEHMHCNCTFY 1153
Query: 81 GPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFI 140
GP+ +G LA+ + K+ P +R+ G I++ N + KKLKL G P KI+K TAF+
Sbjct: 1154 GPLASVNSGILALYNY-KKVPFYRICINGLIIETNNNLNIMKKLKLIGEPYKIFKNTAFV 1212
Query: 141 KDMFNSTLEVAKF 153
K+MFNS LEV KF
Sbjct: 1213 KNMFNSDLEVCKF 1225
>DICTYBASE|DDB_G0278331 [details] [associations]
symbol:DDB_G0278331 "Pre-rRNA-processing protein TSR1
homolog" species:44689 "Dictyostelium discoideum" [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
dictyBase:DDB_G0278331 GO:GO:0005730 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 GO:GO:0042254 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 KO:K14799 OMA:DAEQTWP RefSeq:XP_642295.1
STRING:Q54YA7 EnsemblProtists:DDB0205380 GeneID:8621502
KEGG:ddi:DDB_G0278331 ProtClustDB:CLSZ2729113 Uniprot:Q54YA7
Length = 826
Score = 146 (56.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 42/124 (33%), Positives = 59/124 (47%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNM-RYRMLKYTPQHVACMAHFWG 81
V+KH+ Y + ++S V GWR+F T PIYS N + + K+ MA +G
Sbjct: 636 VEKHKSYEETVRSKEEVYFHFGWRKFSTSPIYSISSPNCDKQKFEKFLLPARNTMATIYG 695
Query: 82 PITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMK-IYKKTAFI 140
PIT L E ++ATG + N + K++ LTGV K I KK +
Sbjct: 696 PITYPPAPLLIFNGKDCNE----LVATGYLSSVNPDRIICKRIILTGVIAKSISKKFVTV 751
Query: 141 KDMF 144
KDMF
Sbjct: 752 KDMF 755
>UNIPROTKB|Q5XGY1 [details] [associations]
symbol:tsr1 "Pre-rRNA-processing protein TSR1 homolog"
species:8355 "Xenopus laevis" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:BC084296 RefSeq:NP_001088282.1
UniGene:Xl.8091 ProteinModelPortal:Q5XGY1 PRIDE:Q5XGY1
GeneID:495115 KEGG:xla:495115 Xenbase:XB-GENE-5753645
Uniprot:Q5XGY1
Length = 815
Score = 144 (55.7 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 35/133 (26%), Positives = 71/133 (53%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
V++H + +K+ +I G+RRF+ P++S+ +++ ++ + + + P
Sbjct: 609 VRRHPGNNEPIKAKEELIFHCGFRRFRASPLFSQHSSADKHKSERFLRSDTSVVVTVYAP 668
Query: 83 ITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIK 141
IT L + +R G + ++ATG++L+ N V K++ L+G P KI K+TA ++
Sbjct: 669 ITFPPASVLVFK---QRYNGMQDLVATGSLLNVNPDRIVIKRIVLSGHPFKIMKRTAVVR 725
Query: 142 DMFNSTLEVAKFE 154
MF + +V F+
Sbjct: 726 YMFFNREDVLWFK 738
>FB|FBgn0037073 [details] [associations]
symbol:CG7338 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 EMBL:AE014296
GO:GO:0005730 GO:GO:0022008 GO:GO:0042255 InterPro:IPR007034
Pfam:PF04950 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 EMBL:BT003192 EMBL:BT044092
EMBL:AY058591 RefSeq:NP_649304.1 UniGene:Dm.1034
ProteinModelPortal:Q9VP47 IntAct:Q9VP47 MINT:MINT-823454
STRING:Q9VP47 PaxDb:Q9VP47 PRIDE:Q9VP47 EnsemblMetazoa:FBtr0078342
GeneID:40360 KEGG:dme:Dmel_CG7338 UCSC:CG7338-RA
FlyBase:FBgn0037073 InParanoid:Q9VP47 OrthoDB:EOG4QFTVF
PhylomeDB:Q9VP47 GenomeRNAi:40360 NextBio:818374 Bgee:Q9VP47
Uniprot:Q9VP47
Length = 814
Score = 143 (55.4 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 33 LKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKY-TPQHVACMAHFWGPITRSGTGFL 91
LKS +I+ G+RRF PIYS+ + +++ +Y P C A F+ PI L
Sbjct: 614 LKSKEQLIIQCGYRRFVVNPIYSQHTNGDKHKFERYFRPYETVC-ATFYAPIQFPPAPVL 672
Query: 92 AVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVA 151
A + + ++A G +L N V K++ L+G PM+I +K+A I+ MF +V
Sbjct: 673 AFK--VNPDSTLALVARGRLLSCNPDRIVLKRVVLSGHPMRINRKSASIRYMFFYKEDVE 730
Query: 152 KFEGLR 157
F+ ++
Sbjct: 731 YFKPVK 736
>UNIPROTKB|Q5R434 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9601 "Pongo abelii" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 GO:GO:0005730 GO:GO:0042255
InterPro:IPR007034 Pfam:PF04950 KO:K14799 CTD:55720
HOVERGEN:HBG099515 EMBL:CR861426 RefSeq:NP_001127041.1
UniGene:Pab.787 GeneID:100174068 KEGG:pon:100174068 Uniprot:Q5R434
Length = 805
Score = 126 (49.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 31/122 (25%), Positives = 64/122 (52%)
Query: 33 LKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLA 92
+K+ +I G+RRF+ P++S+ ++++ ++ +A +A + PIT L
Sbjct: 609 VKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLL 668
Query: 93 VQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAK 152
+ K +IATG ++ + V K++ L+G P+K++ K A ++ MF + +V
Sbjct: 669 FKQ--KSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPLKMFTKMAVVRYMFFNREDVLW 726
Query: 153 FE 154
F+
Sbjct: 727 FK 728
Score = 39 (18.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 12 GNMNCFSFQARVKKHRWYGKILKSGN 37
GN F KHRW+ + G+
Sbjct: 117 GNTQSFMLLCPRLKHRWFFTSARPGD 142
>UNIPROTKB|Q2NL82 [details] [associations]
symbol:TSR1 "Pre-rRNA-processing protein TSR1 homolog"
species:9606 "Homo sapiens" [GO:0005730 "nucleolus" evidence=ISS]
[GO:0042255 "ribosome assembly" evidence=ISS] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 EMBL:CH471108 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP EMBL:AB037822
EMBL:BC019090 EMBL:BC110851 EMBL:BC126110 EMBL:AK001396
IPI:IPI00292894 RefSeq:NP_060598.3 UniGene:Hs.388170
ProteinModelPortal:Q2NL82 IntAct:Q2NL82 MINT:MINT-4860330
STRING:Q2NL82 PhosphoSite:Q2NL82 DMDM:121948971 PaxDb:Q2NL82
PeptideAtlas:Q2NL82 PRIDE:Q2NL82 DNASU:55720
Ensembl:ENST00000301364 GeneID:55720 KEGG:hsa:55720 UCSC:uc002fuj.3
CTD:55720 GeneCards:GC17M002225 HGNC:HGNC:25542 HPA:HPA024434
MIM:611214 neXtProt:NX_Q2NL82 PharmGKB:PA142670691
HOVERGEN:HBG099515 InParanoid:Q2NL82 OrthoDB:EOG4MKNFQ
GenomeRNAi:55720 NextBio:60619 PMAP-CutDB:Q2NL82 Bgee:Q2NL82
CleanEx:HS_TSR1 Genevestigator:Q2NL82 Uniprot:Q2NL82
Length = 804
Score = 127 (49.8 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 32/122 (26%), Positives = 63/122 (51%)
Query: 33 LKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLA 92
+K+ +I G+RRF+ P++S+ ++++ ++ +A +A + PIT L
Sbjct: 608 VKAKEELIFHCGFRRFRASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLL 667
Query: 93 VQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAK 152
+ K +IATG ++ + V K++ L+G P KI+ K A ++ MF + +V
Sbjct: 668 FKQ--KSNGMHSLIATGHLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLW 725
Query: 153 FE 154
F+
Sbjct: 726 FK 727
Score = 37 (18.1 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 12 GNMNCFSFQARVKKHRWYGKILKSGN 37
GN F KHRW+ + G+
Sbjct: 117 GNTQNFMLLCPRLKHRWFFTSARPGD 142
>ZFIN|ZDB-GENE-030131-3762 [details] [associations]
symbol:tsr1 "TSR1, 20S rRNA accumulation, homolog
(yeast)" species:7955 "Danio rerio" [GO:0005634 "nucleus"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
ZFIN:ZDB-GENE-030131-3762 GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 GeneTree:ENSGT00550000074945
EMBL:CT027805 IPI:IPI00817275 PRIDE:E7FCX4
Ensembl:ENSDART00000052645 ArrayExpress:E7FCX4 Bgee:E7FCX4
Uniprot:E7FCX4
Length = 836
Score = 139 (54.0 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 33/133 (24%), Positives = 72/133 (54%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
V++H + +KS ++ G+RRF+ I+S+ ++++ ++ + F+ P
Sbjct: 630 VRQHPSNTEPIKSKEELVFQCGFRRFRASAIFSQHTTGDKHKLERFLRPDAPTIMSFYAP 689
Query: 83 ITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIK 141
IT G L + +R+ G + ++ATG++L + V K++ L+G P KI +++A ++
Sbjct: 690 ITFPTAGVLVFK---QRDNGMQDLVATGSLLSCDPRRVVLKRIVLSGHPFKINRRSAVVR 746
Query: 142 DMFNSTLEVAKFE 154
MF + ++ F+
Sbjct: 747 YMFFNRDDILWFK 759
>UNIPROTKB|E2QYA6 [details] [associations]
symbol:E2QYA6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030599 Uniprot:E2QYA6
Length = 656
Score = 136 (52.9 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
V +H + +K+ +I G+RRF+ P++S+ +++ ++ VA + +GP
Sbjct: 450 VSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADVALVVTIYGP 509
Query: 83 ITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIK 141
IT L + + G +IATG +L + V K++ L+G P KI+ K A ++
Sbjct: 510 ITFPPASVLLFK---QNSNGMHSLIATGYLLSVDPDRMVIKRIVLSGHPFKIFTKMAVVR 566
Query: 142 DMFNSTLEVAKFE 154
MF S +V F+
Sbjct: 567 YMFFSREDVLWFK 579
>UNIPROTKB|J9NS98 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 KO:K14799 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AAEX03008382 RefSeq:XP_852531.1 Ensembl:ENSCAFT00000003327
GeneID:610048 KEGG:cfa:610048 Uniprot:J9NS98
Length = 801
Score = 136 (52.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 37/133 (27%), Positives = 67/133 (50%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
V +H + +K+ +I G+RRF+ P++S+ +++ ++ VA + +GP
Sbjct: 595 VSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADVALVVTIYGP 654
Query: 83 ITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIK 141
IT L + + G +IATG +L + V K++ L+G P KI+ K A ++
Sbjct: 655 ITFPPASVLLFK---QNSNGMHSLIATGYLLSVDPDRMVIKRIVLSGHPFKIFTKMAVVR 711
Query: 142 DMFNSTLEVAKFE 154
MF S +V F+
Sbjct: 712 YMFFSREDVLWFK 724
>UNIPROTKB|F1NNP8 [details] [associations]
symbol:LOC100857289 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:AADN02025881 IPI:IPI00574494 Ensembl:ENSGALT00000005046
Uniprot:F1NNP8
Length = 803
Score = 136 (52.9 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 2 LKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNM 61
L L L+ M+ +F V++H +K+ +I G+RRF+ P++S+
Sbjct: 578 LVLFSLLPHEQKMSVLNFL--VRRHPSNSDPVKAKEELIFHCGFRRFRASPLFSQHTSAD 635
Query: 62 RYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEV 120
++++ ++ A + + PIT L + +R G +IATG++L + +
Sbjct: 636 KHKLERFLRLDAALVVTVYAPITFPPASVLVFK---QRSNGMHDLIATGSLLAVDPDRII 692
Query: 121 TKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFE 154
K+L L+G P KI+ K A ++ MF + +V F+
Sbjct: 693 IKRLVLSGHPFKIFTKAAVVRYMFFNREDVMWFK 726
>UNIPROTKB|F1PXP0 [details] [associations]
symbol:F1PXP0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 GeneTree:ENSGT00550000074945 EMBL:AAEX03006702
Ensembl:ENSCAFT00000030598 OMA:THEVERF Uniprot:F1PXP0
Length = 725
Score = 133 (51.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
V +H + +K+ +I G+RRF+ P++S+ +++ ++ VA + +GP
Sbjct: 598 VSRHPGNIEPVKAKEDLIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADVALVVTIYGP 657
Query: 83 ITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIK 141
IT L + + G +IATG +L + V K++ L+G P KI+ K A ++
Sbjct: 658 ITFPPASVLLFK---QNSNGMHSLIATGYLLSVDPDRMVIKRIVLSGHPFKIFTKMAVVR 714
Query: 142 DMFNSTLEV 150
MF S +V
Sbjct: 715 YMFFSREDV 723
>MGI|MGI:2144566 [details] [associations]
symbol:Tsr1 "TSR1 20S rRNA accumulation" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR012948
Pfam:PF08142 SMART:SM00785 MGI:MGI:2144566 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:AL604066
UniGene:Mm.220843 eggNOG:COG5177 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 HOVERGEN:HBG099515
OrthoDB:EOG4MKNFQ EMBL:AK030545 EMBL:AK134365 EMBL:AK154063
EMBL:AK162686 EMBL:AK165662 EMBL:BC031531 EMBL:AK129350
IPI:IPI00420546 IPI:IPI00875206 IPI:IPI00875360 RefSeq:NP_796299.2
ProteinModelPortal:Q5SWD9 IntAct:Q5SWD9 STRING:Q5SWD9
PhosphoSite:Q5SWD9 PaxDb:Q5SWD9 PRIDE:Q5SWD9
Ensembl:ENSMUST00000045807 GeneID:104662 KEGG:mmu:104662
UCSC:uc007kcm.1 UCSC:uc007kcn.1 UCSC:uc007kco.1 InParanoid:Q5SWD9
NextBio:357196 Bgee:Q5SWD9 CleanEx:MM_TSR1 Genevestigator:Q5SWD9
Uniprot:Q5SWD9
Length = 803
Score = 119 (46.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 31/122 (25%), Positives = 60/122 (49%)
Query: 33 LKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLA 92
+K+ +I G+RRF+ P++S+ +++ ++ A + + PIT L
Sbjct: 607 VKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADAAFVVTVFAPITFPPASVLL 666
Query: 93 VQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAK 152
+ +R +IATG + + V K++ L+G P KI+ K A ++ MF + +V
Sbjct: 667 FKQ--RRNGMHSLIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVMW 724
Query: 153 FE 154
F+
Sbjct: 725 FK 726
Score = 36 (17.7 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 12 GNMNCFSFQARVKKHRWYGKILKSGN 37
G+ F KHRW+ + G+
Sbjct: 117 GSTQSFMLLCPSLKHRWFFTYARPGD 142
>POMBASE|SPAC23H4.15 [details] [associations]
symbol:SPAC23H4.15 "ribosome biogenesis protein Tsr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006364 "rRNA processing"
evidence=ISO] [GO:0042254 "ribosome biogenesis" evidence=ISO]
[GO:0043021 "ribonucleoprotein complex binding" evidence=ISO]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 PomBase:SPAC23H4.15
GO:GO:0005737 EMBL:CU329670 GO:GO:0005730 GO:GO:0043021
GO:GO:0006364 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:T38313
RefSeq:NP_593391.1 STRING:O13956 EnsemblFungi:SPAC23H4.15.1
GeneID:2541779 KEGG:spo:SPAC23H4.15 OrthoDB:EOG4BS0TS
NextBio:20802869 Uniprot:O13956
Length = 783
Score = 129 (50.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 39/161 (24%), Positives = 74/161 (45%)
Query: 1 MLKLLRLVGTTGNMNCFSFQARVKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQE-- 58
+L L L+ + F A +H Y + ++S +++ +G RRF P+YS
Sbjct: 569 LLVLYSLLQYENKLTVSQFTAM--QHSEYEEPIESKEELLLQIGPRRFMVRPLYSDPTAS 626
Query: 59 --DNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQ 116
N + +Y P A +A PI + + + + R+ ATG+ ++ +
Sbjct: 627 GASNNLQKYHRYLPPKQAVIASVISPIVFGNVPIIMFKKSS--DNSLRLAATGSYVNCDT 684
Query: 117 TAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFEGLR 157
+ + K+ LTG P K++KK I+ MF + +V F+ ++
Sbjct: 685 NSVIAKRAVLTGHPFKVHKKLVTIRYMFFNPEDVIWFKPIQ 725
>UNIPROTKB|F1MSR6 [details] [associations]
symbol:TSR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR012948 Pfam:PF08142
SMART:SM00785 GO:GO:0005634 GO:GO:0042254 InterPro:IPR007034
Pfam:PF04950 OMA:DAEQTWP GeneTree:ENSGT00550000074945
EMBL:DAAA02048673 EMBL:DAAA02048672 IPI:IPI00867224
Ensembl:ENSBTAT00000005534 ArrayExpress:F1MSR6 Uniprot:F1MSR6
Length = 804
Score = 129 (50.5 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 35/133 (26%), Positives = 66/133 (49%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGP 82
V +H + +K+ +I G+RRF+ P++S+ +++ ++ A + + P
Sbjct: 598 VSRHPGNTEPVKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADTALVVTVYAP 657
Query: 83 ITRSGTGFLAVQDVAKREPGFR-VIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIK 141
IT L + + G +IATG +L + V K++ L+G P KI+ KTA ++
Sbjct: 658 ITFPPASVLLFK---QNSNGMHSLIATGHLLSVDPDRMVIKRVVLSGHPFKIFTKTAVVR 714
Query: 142 DMFNSTLEVAKFE 154
MF + +V F+
Sbjct: 715 YMFFNREDVLWFK 727
>RGD|2322150 [details] [associations]
symbol:Tsr1 "TSR1, 20S rRNA accumulation, homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
RGD:2322150 GO:GO:0005634 GO:GO:0042254 EMBL:CH473948
InterPro:IPR007034 Pfam:PF04950 KO:K14799 OMA:DAEQTWP
GeneTree:ENSGT00550000074945 CTD:55720 OrthoDB:EOG4MKNFQ
IPI:IPI00370294 RefSeq:XP_002724564.1 RefSeq:XP_002727820.1
UniGene:Rn.101331 Ensembl:ENSRNOT00000003992 GeneID:100360406
KEGG:rno:100360406 Uniprot:D3ZEM8
Length = 804
Score = 128 (50.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 33/122 (27%), Positives = 61/122 (50%)
Query: 33 LKSGNPVIMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLA 92
+K+ +I G+RRF+ P++S+ +++ ++ A + + PIT L
Sbjct: 608 VKAKEELIFHCGFRRFRASPLFSQHTAADKHKFQRFLTADAALVVTVFAPITFPPASVLL 667
Query: 93 VQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAK 152
+ +R +IATG + + V K++ L+G P KI+ KTA ++ MF S +V
Sbjct: 668 FKQ--RRNGMHSLIATGHLFSVDPDRMVIKRVVLSGHPFKIFTKTAVVRYMFFSRDDVLW 725
Query: 153 FE 154
F+
Sbjct: 726 FK 727
>WB|WBGene00006497 [details] [associations]
symbol:tag-151 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
GO:GO:0009792 GO:GO:0040010 GO:GO:0005730 GO:GO:0040011
EMBL:FO081114 GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
PIR:C88131 RefSeq:NP_494840.1 ProteinModelPortal:Q19329
STRING:Q19329 PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1
EnsemblMetazoa:F10G7.1.2 GeneID:173812 KEGG:cel:CELE_F10G7.1
UCSC:F10G7.1.2 CTD:173812 WormBase:F10G7.1
GeneTree:ENSGT00550000074945 InParanoid:Q19329 NextBio:881217
Uniprot:Q19329
Length = 785
Score = 126 (49.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 40 IMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAV-QDVAK 98
I VG+R+F+ ++S ++++ ++ P +A + PIT + L QD
Sbjct: 590 IFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKG 649
Query: 99 REPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFE 154
R+ ++ATG+ILD+N V K+ L G P KI ++ ++ MF + ++ F+
Sbjct: 650 RQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWFK 702
>UNIPROTKB|Q19329 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6239 "Caenorhabditis elegans" [GO:0042255 "ribosome
assembly" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0009792
GO:GO:0040010 GO:GO:0005730 GO:GO:0040011 EMBL:FO081114
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177
HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP PIR:C88131
RefSeq:NP_494840.1 ProteinModelPortal:Q19329 STRING:Q19329
PaxDb:Q19329 EnsemblMetazoa:F10G7.1.1 EnsemblMetazoa:F10G7.1.2
GeneID:173812 KEGG:cel:CELE_F10G7.1 UCSC:F10G7.1.2 CTD:173812
WormBase:F10G7.1 GeneTree:ENSGT00550000074945 InParanoid:Q19329
NextBio:881217 Uniprot:Q19329
Length = 785
Score = 126 (49.4 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 32/116 (27%), Positives = 60/116 (51%)
Query: 40 IMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAV-QDVAK 98
I VG+R+F+ ++S ++++ ++ P +A + PIT + L QD
Sbjct: 590 IFYVGFRQFEANAVFSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKG 649
Query: 99 REPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFE 154
R+ ++ATG+ILD+N V K+ L G P KI ++ ++ MF + ++ F+
Sbjct: 650 RQ---ELVATGSILDSNPDRIVLKRTVLAGHPYKINRRAVVVRYMFFNREDIEWFK 702
>UNIPROTKB|Q61WR2 [details] [associations]
symbol:tag-151 "Pre-rRNA-processing protein TSR1 homolog"
species:6238 "Caenorhabditis briggsae" [GO:0005730 "nucleolus"
evidence=ISS] [GO:0042255 "ribosome assembly" evidence=ISS]
InterPro:IPR012948 Pfam:PF08142 SMART:SM00785 GO:GO:0005730
GO:GO:0042255 InterPro:IPR007034 Pfam:PF04950 EMBL:HE600920
RefSeq:XP_002630359.1 STRING:Q61WR2 EnsemblMetazoa:CBG04291
GeneID:8571874 KEGG:cbr:CBG04291 CTD:8571874 WormBase:CBG04291
eggNOG:COG5177 HOGENOM:HOG000165026 KO:K14799 OMA:DAEQTWP
Uniprot:Q61WR2
Length = 788
Score = 120 (47.3 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 40 IMSVGWRRFQTLPIYSKQEDNMRYRMLKYTPQHVACMAHFWGPITRSGTGFLAV-QDVAK 98
I VG+R+F+ + S ++++ ++ P +A + PIT + L QD
Sbjct: 593 IFYVGFRQFEAHAVLSSNTPGDKFKLERFMPTEKTFVATVYAPITFNPATVLCFRQDDKG 652
Query: 99 REPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAFIKDMFNSTLEVAKFE 154
R+ ++ATG++LD N V K+ L+G P KI ++ ++ MF + ++ F+
Sbjct: 653 RQ---ELVATGSVLDTNPDRIVLKRTVLSGHPYKINRRAVVVRYMFFNREDIDWFK 705
>TAIR|locus:2035893 [details] [associations]
symbol:AT1G42440 "AT1G42440" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=RCA] InterPro:IPR012948 Pfam:PF08142 SMART:SM00785
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0042254
InterPro:IPR007034 Pfam:PF04950 eggNOG:COG5177 HOGENOM:HOG000165026
KO:K14799 OMA:DAEQTWP EMBL:AF361826 EMBL:AY133551 EMBL:BT000755
IPI:IPI00527453 RefSeq:NP_564480.1 UniGene:At.19120
UniGene:At.67019 ProteinModelPortal:Q9ASU6 IntAct:Q9ASU6
STRING:Q9ASU6 PaxDb:Q9ASU6 PRIDE:Q9ASU6 EnsemblPlants:AT1G42440.1
GeneID:840848 KEGG:ath:AT1G42440 TAIR:At1g42440 InParanoid:Q9ASU6
PhylomeDB:Q9ASU6 ProtClustDB:CLSN2688391 ArrayExpress:Q9ASU6
Genevestigator:Q9ASU6 Uniprot:Q9ASU6
Length = 793
Score = 118 (46.6 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 32/135 (23%), Positives = 68/135 (50%)
Query: 23 VKKHRWYGKILKSGNPVIMSVGWRRFQTLPIYSKQE-DNMRYRMLKYTPQHVAC--MAHF 79
VKK+ Y +K+ ++ VG+R+F P+++ + +++M ++ H C +A
Sbjct: 603 VKKYDGYEAPIKTKEELMFHVGFRQFIARPVFATDNFSSDKHKMERFL--HPGCFSLASI 660
Query: 80 WGPITRSGTGFLAVQDVAKREPGFRVIATGTILDANQTAEVTKKLKLTGVPMKIYKKTAF 139
+GPI+ + ++ +P + A G++ + KK+ LTG P ++ K A
Sbjct: 661 YGPISFPPLPLVVLKISEGSDPP-AIAALGSLKSVEPNKIILKKIILTGYPQRVSKMKAS 719
Query: 140 IKDMFNSTLEVAKFE 154
++ MF++ +V F+
Sbjct: 720 VRYMFHNPEDVKWFK 734
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 157 157 0.00079 106 3 11 22 0.43 31
30 0.42 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 37
No. of states in DFA: 581 (62 KB)
Total size of DFA: 143 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.37u 0.13s 14.50t Elapsed: 00:00:01
Total cpu time: 14.38u 0.13s 14.51t Elapsed: 00:00:01
Start: Thu Aug 15 16:00:54 2013 End: Thu Aug 15 16:00:55 2013