Query psy17862
Match_columns 265
No_of_seqs 174 out of 3416
Neff 10.5
Searched_HMMs 29240
Date Sat Aug 17 00:56:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17862.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17862hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b7b_A Euchromatic histone-lys 100.0 6.2E-38 2.1E-42 247.3 23.5 207 49-258 9-235 (237)
2 1yyh_A HN1;, notch 1, ankyrin 100.0 1.2E-37 4E-42 248.4 20.9 197 47-259 53-249 (253)
3 2rfa_A Transient receptor pote 100.0 2.5E-37 8.5E-42 243.2 22.4 197 50-262 2-226 (232)
4 2f8y_A Notch homolog 1, transl 100.0 3.9E-37 1.3E-41 240.6 23.3 194 48-257 22-215 (223)
5 4b93_B Ankyrin repeat domain-c 100.0 1.4E-38 4.7E-43 255.8 14.0 217 12-245 10-230 (269)
6 1k1a_A B-cell lymphoma 3-encod 100.0 1.5E-37 5E-42 245.6 18.8 205 49-255 7-238 (241)
7 1wdy_A 2-5A-dependent ribonucl 100.0 3.2E-36 1.1E-40 243.3 25.1 237 14-257 6-277 (285)
8 3aji_A 26S proteasome non-ATPa 100.0 9.8E-37 3.4E-41 239.5 21.2 218 16-254 9-226 (231)
9 3ljn_A Hypothetical protein; a 100.0 1.8E-37 6.1E-42 259.9 17.5 206 47-255 16-266 (364)
10 3hra_A Ankyrin repeat family p 100.0 2.5E-36 8.5E-41 232.3 22.2 192 49-255 3-200 (201)
11 1oy3_D Transcription factor in 100.0 1.2E-36 4.1E-41 245.7 20.3 191 48-255 6-247 (282)
12 3d9h_A CDNA FLJ77766, highly s 100.0 3.4E-36 1.2E-40 244.0 21.0 207 47-261 55-281 (285)
13 4gpm_A Engineered protein OR26 100.0 5.5E-36 1.9E-40 223.9 19.4 159 52-227 5-163 (169)
14 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-35 3.7E-40 238.1 20.9 185 50-255 35-219 (261)
15 2dzn_A Probable 26S proteasome 100.0 2.1E-35 7.2E-40 231.4 21.6 182 47-244 32-219 (228)
16 3eu9_A Huntingtin-interacting 100.0 3.2E-35 1.1E-39 231.7 21.9 206 48-257 6-234 (240)
17 1ikn_D Protein (I-kappa-B-alph 100.0 1.5E-36 5.1E-41 239.5 14.2 197 48-260 5-211 (236)
18 2fo1_E LIN-12 protein; beta-ba 100.0 6.7E-36 2.3E-40 251.2 18.7 207 49-257 123-370 (373)
19 1s70_B 130 kDa myosin-binding 100.0 1.8E-35 6E-40 241.1 20.6 226 1-255 1-286 (299)
20 1n11_A Ankyrin; clathrin, BAND 100.0 4.6E-35 1.6E-39 250.9 24.1 202 49-255 177-398 (437)
21 3utm_A Tankyrase-1; tankyrase, 100.0 6E-35 2.1E-39 242.7 23.8 221 13-255 24-302 (351)
22 1n11_A Ankyrin; clathrin, BAND 100.0 5.2E-35 1.8E-39 250.6 23.5 206 47-256 142-367 (437)
23 1yyh_A HN1;, notch 1, ankyrin 100.0 8.9E-36 3.1E-40 237.5 17.3 193 48-257 7-214 (253)
24 1oy3_D Transcription factor in 100.0 2.6E-35 8.9E-40 237.9 19.0 183 47-245 41-270 (282)
25 2etb_A Transient receptor pote 100.0 6.3E-36 2.1E-40 238.7 14.4 191 51-258 2-246 (256)
26 2dzn_A Probable 26S proteasome 100.0 1E-34 3.5E-39 227.5 20.3 191 51-255 2-196 (228)
27 2xai_A ASB-9, ankyrin repeat a 100.0 5E-35 1.7E-39 234.3 18.7 189 50-257 2-190 (261)
28 1wdy_A 2-5A-dependent ribonucl 100.0 3.3E-34 1.1E-38 231.4 22.9 203 50-255 4-241 (285)
29 4g8k_A 2-5A-dependent ribonucl 100.0 6.9E-34 2.4E-38 235.7 23.8 236 13-255 25-295 (337)
30 4b93_B Ankyrin repeat domain-c 100.0 5.1E-35 1.8E-39 235.0 15.8 191 50-256 10-208 (269)
31 3d9h_A CDNA FLJ77766, highly s 100.0 9.9E-34 3.4E-38 229.5 20.9 206 46-256 10-245 (285)
32 4gpm_A Engineered protein OR26 100.0 9.1E-34 3.1E-38 211.9 19.0 152 101-255 7-158 (169)
33 3kea_A K1L; tropism, ANK repea 100.0 8.6E-35 2.9E-39 235.8 14.5 190 47-256 27-218 (285)
34 2pnn_A Transient receptor pote 100.0 9.9E-35 3.4E-39 233.9 14.3 201 46-257 8-257 (273)
35 3jxi_A Vanilloid receptor-rela 100.0 8.5E-35 2.9E-39 232.6 13.1 199 50-259 4-251 (260)
36 4hbd_A KN motif and ankyrin re 100.0 5.3E-34 1.8E-38 230.1 14.1 190 51-255 76-272 (276)
37 3utm_A Tankyrase-1; tankyrase, 100.0 7E-33 2.4E-37 230.2 20.9 193 49-256 22-270 (351)
38 3v30_A DNA-binding protein rfx 100.0 2.7E-33 9.1E-38 210.2 16.1 170 51-236 2-171 (172)
39 3ljn_A Hypothetical protein; a 100.0 2E-33 6.8E-38 235.3 14.6 237 12-259 19-315 (364)
40 2fo1_E LIN-12 protein; beta-ba 100.0 3.5E-33 1.2E-37 234.6 15.3 205 46-256 89-336 (373)
41 2f8y_A Notch homolog 1, transl 100.0 1.7E-32 5.8E-37 214.2 17.4 179 62-257 2-182 (223)
42 2rfm_A Putative ankyrin repeat 100.0 1.9E-32 6.4E-37 209.3 16.7 163 77-255 27-189 (192)
43 4g8k_A 2-5A-dependent ribonucl 100.0 8.3E-32 2.8E-36 223.2 21.6 202 51-255 25-261 (337)
44 1ikn_D Protein (I-kappa-B-alph 100.0 1.4E-32 4.8E-37 216.7 15.2 210 16-243 11-229 (236)
45 2vge_A RELA-associated inhibit 100.0 6.5E-35 2.2E-39 229.0 -0.4 198 47-264 17-219 (229)
46 3v31_A Ankyrin repeat family A 100.0 1.7E-31 6E-36 199.3 18.1 162 84-261 2-163 (167)
47 3hra_A Ankyrin repeat family p 100.0 2.7E-31 9.1E-36 204.1 19.4 187 15-221 7-200 (201)
48 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.2E-31 4.2E-36 199.1 16.9 158 50-225 4-162 (162)
49 3b7b_A Euchromatic histone-lys 100.0 4.1E-31 1.4E-35 208.2 20.8 179 76-257 2-201 (237)
50 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.9E-31 1E-35 198.6 18.9 157 49-221 12-168 (169)
51 3v31_A Ankyrin repeat family A 100.0 2.7E-31 9.1E-36 198.3 18.6 156 50-221 2-157 (167)
52 1sw6_A Regulatory protein SWI6 100.0 1.6E-32 5.5E-37 226.6 12.7 174 47-244 127-327 (327)
53 3f6q_A Integrin-linked protein 100.0 1.2E-31 4.1E-36 202.6 16.4 168 50-233 4-171 (179)
54 3aji_A 26S proteasome non-ATPa 100.0 7.3E-32 2.5E-36 211.7 15.5 159 47-221 69-227 (231)
55 1k1a_A B-cell lymphoma 3-encod 100.0 6.2E-31 2.1E-35 207.6 20.5 177 78-257 2-207 (241)
56 2rfm_A Putative ankyrin repeat 100.0 3.7E-31 1.3E-35 202.1 18.4 158 48-221 32-189 (192)
57 3v30_A DNA-binding protein rfx 100.0 5.5E-31 1.9E-35 197.6 18.1 160 85-259 2-161 (172)
58 3kea_A K1L; tropism, ANK repea 100.0 7.1E-32 2.4E-36 218.6 12.3 183 51-258 62-246 (285)
59 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.2E-30 4.2E-35 195.2 17.7 157 82-254 11-167 (169)
60 1awc_B Protein (GA binding pro 100.0 1.7E-30 5.8E-35 191.2 18.1 150 52-218 3-152 (153)
61 3twr_A Tankyrase-2; ankyrin re 100.0 5.6E-31 1.9E-35 196.2 15.2 157 49-221 6-162 (165)
62 1bd8_A P19INK4D CDK4/6 inhibit 100.0 8.7E-31 3E-35 193.3 15.8 154 85-255 2-155 (156)
63 3twr_A Tankyrase-2; ankyrin re 100.0 4.6E-31 1.6E-35 196.7 14.0 157 82-254 5-161 (165)
64 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.5E-30 8.6E-35 190.8 17.3 154 51-221 2-155 (156)
65 1awc_B Protein (GA binding pro 100.0 2.9E-30 9.9E-35 190.0 16.3 142 106-251 10-151 (153)
66 2rfa_A Transient receptor pote 100.0 3.3E-30 1.1E-34 202.4 17.2 185 16-221 6-219 (232)
67 3f6q_A Integrin-linked protein 100.0 1.8E-30 6.1E-35 196.1 15.0 158 83-255 3-160 (179)
68 2pnn_A Transient receptor pote 100.0 6.7E-31 2.3E-35 211.5 13.2 205 14-237 14-271 (273)
69 4hbd_A KN motif and ankyrin re 100.0 3.3E-30 1.1E-34 207.8 17.1 168 47-224 107-275 (276)
70 1ihb_A P18-INK4C(INK6), cyclin 100.0 3E-30 1E-34 191.6 15.3 155 84-255 4-159 (162)
71 2etb_A Transient receptor pote 100.0 2.1E-30 7.3E-35 206.6 13.8 189 15-221 4-243 (256)
72 1s70_B 130 kDa myosin-binding 100.0 1.4E-29 4.9E-34 206.1 17.0 184 57-257 4-256 (299)
73 1ycs_B 53BP2, P53BP2; ankyrin 100.0 5.8E-31 2E-35 207.9 7.9 179 49-245 3-193 (239)
74 3jxi_A Vanilloid receptor-rela 100.0 7.9E-30 2.7E-34 203.7 13.3 190 15-221 7-247 (260)
75 3eu9_A Huntingtin-interacting 100.0 1.5E-28 5.2E-33 193.4 18.6 198 16-221 12-232 (240)
76 1sw6_A Regulatory protein SWI6 100.0 1.4E-29 4.9E-34 209.0 9.6 178 54-256 100-306 (327)
77 1bi7_B P16INK4A, MTS1, multipl 100.0 2.4E-28 8.3E-33 180.3 11.5 146 78-240 5-151 (156)
78 1d9s_A Cyclin-dependent kinase 100.0 4.3E-28 1.5E-32 174.9 12.3 131 75-221 2-133 (136)
79 1ycs_B 53BP2, P53BP2; ankyrin 100.0 4E-28 1.4E-32 191.6 11.8 158 83-257 3-163 (239)
80 1d9s_A Cyclin-dependent kinase 100.0 9E-28 3.1E-32 173.1 12.3 131 122-255 2-133 (136)
81 3t8k_A Uncharacterized protein 100.0 3.2E-28 1.1E-32 184.7 10.1 147 106-255 14-176 (186)
82 1bi7_B P16INK4A, MTS1, multipl 100.0 6.1E-28 2.1E-32 178.2 11.2 142 48-205 9-151 (156)
83 3t8k_A Uncharacterized protein 99.9 5.9E-28 2E-32 183.2 10.8 153 51-221 6-176 (186)
84 3deo_A Signal recognition part 99.9 6.7E-28 2.3E-32 182.6 4.5 141 82-256 41-182 (183)
85 2vge_A RELA-associated inhibit 99.9 2.3E-27 8E-32 186.0 7.1 161 67-244 1-167 (229)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 5.1E-26 1.7E-30 163.9 13.0 124 129-254 11-134 (136)
87 3c5r_A BARD-1, BRCA1-associate 99.9 1.9E-26 6.4E-31 166.4 10.5 128 123-253 2-129 (137)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 2.7E-25 9.1E-30 157.6 15.5 123 84-221 1-123 (126)
89 2jab_A H10-2-G3; HER2, darpin, 99.9 1.2E-25 4.2E-30 161.9 13.8 113 106-220 22-134 (136)
90 1n0r_A 4ANK, 4 ankyrin repeats 99.9 3.9E-25 1.3E-29 156.7 15.5 125 51-190 2-126 (126)
91 3c5r_A BARD-1, BRCA1-associate 99.9 4.1E-26 1.4E-30 164.6 8.6 130 75-220 1-130 (137)
92 3aaa_C Myotrophin, protein V-1 99.9 3E-25 1E-29 157.1 11.6 114 129-244 4-117 (123)
93 3ui2_A Signal recognition part 99.9 1.8E-25 6.1E-30 176.9 11.4 169 51-257 15-184 (244)
94 2b0o_E UPLC1; arfgap, structur 99.9 5E-25 1.7E-29 179.4 10.7 142 52-211 152-299 (301)
95 2b0o_E UPLC1; arfgap, structur 99.9 1.4E-24 4.8E-29 176.8 11.4 138 100-246 153-299 (301)
96 3deo_A Signal recognition part 99.9 3.3E-24 1.1E-28 162.2 12.6 139 49-221 42-181 (183)
97 2aja_A Ankyrin repeat family p 99.9 7.9E-27 2.7E-31 195.1 -2.2 147 51-220 92-246 (376)
98 3ehr_A Osteoclast-stimulating 99.9 4.3E-25 1.5E-29 172.2 7.7 137 81-233 69-206 (222)
99 3ehr_A Osteoclast-stimulating 99.9 1.2E-24 4.1E-29 169.6 9.3 136 50-199 72-207 (222)
100 3aaa_C Myotrophin, protein V-1 99.9 1.4E-23 4.6E-28 148.5 13.6 112 82-207 4-115 (123)
101 3ui2_A Signal recognition part 99.9 6.3E-24 2.2E-28 168.0 13.0 139 49-221 43-182 (244)
102 2aja_A Ankyrin repeat family p 99.9 3E-25 1E-29 185.5 1.4 173 53-256 67-248 (376)
103 1dcq_A PYK2-associated protein 99.9 5.2E-22 1.8E-26 159.9 17.5 121 134-256 132-261 (278)
104 3lvq_E ARF-GAP with SH3 domain 99.9 4.3E-22 1.5E-26 173.0 16.1 134 100-242 134-276 (497)
105 3lvq_E ARF-GAP with SH3 domain 99.9 2.1E-22 7.2E-27 175.0 14.0 137 53-207 134-276 (497)
106 3jue_A Arfgap with coiled-coil 99.9 2.2E-22 7.5E-27 167.7 13.0 137 106-244 207-348 (368)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 6.2E-22 2.1E-26 132.8 12.2 92 131-224 1-92 (93)
108 2l6b_A NR1C; ankyrin, consensu 99.9 1.6E-22 5.5E-27 141.2 8.8 109 127-237 4-112 (115)
109 3jue_A Arfgap with coiled-coil 99.9 5.8E-22 2E-26 165.1 12.7 143 52-209 200-348 (368)
110 1dcq_A PYK2-associated protein 99.9 2.3E-21 7.9E-26 156.1 14.5 127 52-190 131-263 (278)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.1E-21 1.1E-25 129.4 12.4 93 84-190 1-93 (93)
112 2l6b_A NR1C; ankyrin, consensu 99.9 6.6E-22 2.2E-26 138.0 9.1 109 80-202 4-112 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 3.1E-19 1.1E-23 123.4 10.5 93 125-218 17-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 6E-18 2E-22 116.9 10.3 94 77-184 16-109 (110)
115 3twe_A Alpha4H; unknown functi 40.1 28 0.00094 15.6 2.2 18 6-23 2-19 (27)
116 4g26_A Pentatricopeptide repea 39.9 8.6 0.00029 33.0 0.9 105 146-257 91-202 (501)
117 1gp8_A Protein (scaffolding pr 29.6 43 0.0015 17.2 2.2 19 54-72 16-34 (40)
118 3fxd_A Protein ICMQ; helix bun 25.7 53 0.0018 18.5 2.3 26 1-26 1-26 (57)
119 3mkq_B Coatomer subunit alpha; 22.1 1.6E+02 0.0056 21.1 5.0 44 134-185 94-138 (177)
120 3zrh_A Ubiquitin thioesterase 20.3 2.8E+02 0.0095 23.1 6.4 17 107-123 31-47 (454)
No 1
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=6.2e-38 Score=247.35 Aligned_cols=207 Identities=21% Similarity=0.285 Sum_probs=186.2
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCc--------------------CchHHHHHHhh
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDK--------------------NKRKILEAAEH 108 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~--------------------~~~~l~~a~~~ 108 (265)
..+.||||+|+..|+.+++++|++. |.+++..+..|.||||+|+..++ ...+++.|+..
T Consensus 9 ~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 87 (237)
T 3b7b_A 9 QNKRSPLHAAAEAGHVDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKK 87 (237)
T ss_dssp CCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHc
Confidence 4466888888888888888888887 77888888888888888887654 24688888999
Q ss_pred CCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcC
Q psy17862 109 NDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYG 188 (265)
Q Consensus 109 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g 188 (265)
|+.+++++|+..++..++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|
T Consensus 88 ~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g 167 (237)
T 3b7b_A 88 GHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167 (237)
T ss_dssp TCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT
T ss_pred CCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999766888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhhh
Q psy17862 189 VDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCFN 258 (265)
Q Consensus 189 ~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 258 (265)
++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+|+|+..|+...+..+++...+
T Consensus 168 ~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~l~d 235 (237)
T 3b7b_A 168 CDLHAVNIHGDSPLHIAARENRY-DCVVLFLSR-DSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQD 235 (237)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHTT-TCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCcCCCCCCHHHHHHHhCCH-hHHHHHHHc-CCCCCccCCCCCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999998 788888887 899999999999999999999988888888776554
No 2
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.2e-37 Score=248.40 Aligned_cols=197 Identities=26% Similarity=0.271 Sum_probs=181.0
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcc
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVD 126 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 126 (265)
.+..+.||||+|+..|+.++|++|++. |++++..|..|.||||+| +..++.+++++|+..++..++
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~~~~~~~~ 118 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAA-------------VSADAQGVFQILIRNRATDLD 118 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHHTCHHHHHHHHHSTTSCTT
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHH-------------HHcCCHHHHHHHHHcCCCCcc
Confidence 356788999999999999999999998 899999999999999999 678999999999997666888
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy17862 127 AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAA 206 (265)
Q Consensus 127 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~ 206 (265)
..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+
T Consensus 119 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~ 198 (253)
T 1yyh_A 119 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA 198 (253)
T ss_dssp CCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhhhc
Q psy17862 207 SHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCFNN 259 (265)
Q Consensus 207 ~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~ 259 (265)
..|+. +++++|+++ |++++.+|..|.||+++|++.|+.+++..+.....+.
T Consensus 199 ~~~~~-~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~~~~~ 249 (253)
T 1yyh_A 199 REGSY-ETAKVLLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHH 249 (253)
T ss_dssp HHTCH-HHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-----
T ss_pred HCCCH-HHHHHHHHc-CCCccccccCCCCHHHHHHHcCCHHHHHHHHHHhhhc
Confidence 99998 789999998 8999999999999999999999777777776655443
No 3
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.5e-37 Score=243.18 Aligned_cols=197 Identities=23% Similarity=0.227 Sum_probs=177.1
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCc----
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLV---- 125 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~---- 125 (265)
.+.||||+|+..|+.++|++|++..+.+++.+|..|+||||+| +..|+.+++++|++. +..+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A-------------~~~g~~~~v~~Ll~~-~~~~~~~~ 67 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIA-------------ALYDNLEAAMVLMEA-APELVFEP 67 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHH-CGGGGGCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH-------------HHcCCHHHHHHHHHc-Cchhcccc
Confidence 3679999999999999999999988999999999999999999 678999999999995 4443
Q ss_pred -ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-------------CCChHHHHHHhcCCHHHHHHHHhcCCCc
Q psy17862 126 -DAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI-------------DGWTPLHSACKWNNTECVIVLLNYGVDV 191 (265)
Q Consensus 126 -~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-------------~g~t~l~~a~~~~~~~~v~~Ll~~g~~~ 191 (265)
+..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+..++.+++++|+++|+++
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 68 MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI 147 (232)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred ccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 55677899999999999999999999999999988765 7999999999999999999999999999
Q ss_pred cccCCCCCcHHHHHHhCCChHHHH----HHHhhCCCCCC------cccCCCCccHHHHHhhcCCchhhhhcchhhhhccC
Q psy17862 192 NAQTNGGLTPLHLAASHSHSRDVL----MILLSHPNVDP------HILSTSNESAREIATRSGIHYGLFETIEPCFNNLS 261 (265)
Q Consensus 192 ~~~~~~g~tpL~~a~~~~~~~~~~----~~L~~~~~~~~------~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 261 (265)
+.+|..|+||||+|+..|+. +++ ++|++. |+++ +.+|..|.||||+|++.|+.+.++.|+++......
T Consensus 148 ~~~d~~g~t~L~~A~~~~~~-~~~~~i~~~Ll~~-g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 148 RAQDSLGNTVLHILILQPNK-TFACQMYNLLLSY-DGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp TCCCTTSCCHHHHHHTCSCH-HHHHHHHHHHHHT-TCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCCHHHHHHHcCCh-HHHHHHHHHHHhc-CCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchh
Confidence 99999999999999999998 444 888887 7777 58999999999999999999999999998766544
Q ss_pred C
Q psy17862 262 M 262 (265)
Q Consensus 262 ~ 262 (265)
.
T Consensus 226 ~ 226 (232)
T 2rfa_A 226 A 226 (232)
T ss_dssp -
T ss_pred h
Confidence 3
No 4
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=3.9e-37 Score=240.57 Aligned_cols=194 Identities=27% Similarity=0.280 Sum_probs=182.9
Q ss_pred CCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCccc
Q psy17862 48 QDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDA 127 (265)
Q Consensus 48 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 127 (265)
+..+.||||+|+..|+.++|++|++. +.+++..|..|.||||+| +..++.+++++|+..++..++.
T Consensus 22 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~~~~~~~~~ 87 (223)
T 2f8y_A 22 DRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAA-------------VSADAQGVFQILIRNRATDLDA 87 (223)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHBTTSCTTC
T ss_pred CCCCCchHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHH-------------HHcCCHHHHHHHHHcCCCCccc
Confidence 56788999999999999999999998 889999999999999999 6789999999999977768888
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHh
Q psy17862 128 VDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAAS 207 (265)
Q Consensus 128 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~ 207 (265)
.+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+.
T Consensus 88 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 167 (223)
T 2f8y_A 88 RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAR 167 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 208 HSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 208 ~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
.|+. +++++|+++ |++++.+|..|.||+++|++.|+.+.++.|++.-.
T Consensus 168 ~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~ 215 (223)
T 2f8y_A 168 EGSY-ETAKVLLDH-FANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215 (223)
T ss_dssp HTCH-HHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cCCH-HHHHHHHHc-CCCCccccccCCCHHHHHHHhcchHHHHHHHHcCC
Confidence 9998 788999988 89999999999999999999998888888877644
No 5
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=255.82 Aligned_cols=217 Identities=27% Similarity=0.373 Sum_probs=165.5
Q ss_pred HHHHHHHHHhhcCceeeeeeecccCc--cccccc-CCCcCCCCcccHHHHHhcCChH-HHHHhhccCCCccccCCCCCCc
Q psy17862 12 EKMQQLQESIRDGSFNIGQVSAWDDD--VVGIED-SRNPQDKNKRNILEAAEHNDSK-TLEALLDHDSTLVDAVDKDGYS 87 (265)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~l~~A~~~g~~~-~v~~ll~~~~~~~~~~d~~g~t 87 (265)
+.++.|..|++.|++++.....-... ...... ....+..+.+||++|+..+..+ ++++|+.. |+++|..|.+|+|
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~-Gadvn~~d~~G~T 88 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS-GLGVNVTSQDGSS 88 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------C-CCCTTCCCTTSCC
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC-CCCCCCcCCCCCC
Confidence 56788999999999765433211100 001111 1223345679999999988765 67777776 9999999999999
Q ss_pred HHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCh
Q psy17862 88 PLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWT 167 (265)
Q Consensus 88 pl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t 167 (265)
|||+| +..|+.+++++|+. .+.+++..+..|.||+++|+..++.+++++|+++|++++.+|..|.|
T Consensus 89 pLh~A-------------~~~g~~~~v~~Ll~-~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~T 154 (269)
T 4b93_B 89 PLHVA-------------ALHGRADLIPLLLK-HGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNT 154 (269)
T ss_dssp HHHHH-------------HHTTCTTHHHHHHH-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred HHHHH-------------HHcCcHHHHHHHHh-cCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCC
Confidence 99999 67899999999998 57888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCC
Q psy17862 168 PLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGI 245 (265)
Q Consensus 168 ~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~ 245 (265)
|||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+. +++++|+++ |+|++++|..|+||||+|++.++
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHV-FVVELLLLH-GASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHHHT-TCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCH-HHHHHHHHC-CCCCCCcCCCCCCHHHHHHhCCc
Confidence 99999999999999999999999999999999999999999998 788999987 89999999999999999998875
No 6
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.5e-37 Score=245.62 Aligned_cols=205 Identities=24% Similarity=0.295 Sum_probs=160.5
Q ss_pred CCCcccHHHHHhcCChHHHHHhhc---cCCCccccCCCCCCcHHHHHHHcCc--------------------CchHHHHH
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLD---HDSTLVDAVDKDGYSPLHRACYNDK--------------------NKRKILEA 105 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~---~~~~~~~~~d~~g~tpl~~A~~~~~--------------------~~~~l~~a 105 (265)
+.+.||||+|+..|+.++|++|++ ..+.+++..|..|.||||+|+..++ ...+++.|
T Consensus 7 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A 86 (241)
T 1k1a_A 7 EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA 86 (241)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 445667777777777777776665 2466666666667777777765443 23466666
Q ss_pred HhhCCHHHHHHHHhcCC---CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHhcCCHHHH
Q psy17862 106 AEHNDSKTLEALLDLDS---TLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTT-IDGWTPLHSACKWNNTECV 181 (265)
Q Consensus 106 ~~~~~~~~~~~ll~~~~---~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~v 181 (265)
+..++.+++++|+.... ..++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++
T Consensus 87 ~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v 166 (241)
T 1k1a_A 87 CEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMV 166 (241)
T ss_dssp HHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHH
Confidence 88888999999988543 2667778888999999999999999999999998888887 7788999999999999999
Q ss_pred HHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 182 IVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 182 ~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
++|+++|++++.++..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+++|+..|+.+.++.++.+
T Consensus 167 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 167 QLLLQHGANVNAQMYSGSSALHSASGRGLL-PLVRTLVRS-GADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp HHHHHTTCCTTCBCTTSCBHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred HHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHhc-CCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 999999999998898899999999998887 688888887 888999999999999999998877777776654
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-36 Score=243.27 Aligned_cols=237 Identities=21% Similarity=0.225 Sum_probs=203.7
Q ss_pred HHHHHHHhhcCceeeeeeecccCcccccccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHH
Q psy17862 14 MQQLQESIRDGSFNIGQVSAWDDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRAC 93 (265)
Q Consensus 14 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~ 93 (265)
...|..|++.|+++...... + .+...+......+.||||+|+..|+.+++++|++. |.+++..|..|.||||+|+
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll--~--~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~ 80 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLL--E--GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFLLAA 80 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHH--H--TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHH--H--cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHH
Confidence 35677888888764433221 1 11122222345678999999999999999999998 8899999999999999999
Q ss_pred HcCc--------------------CchHHHHHHhhCCHHHHHHHHhcCCCCcccC----------CCCCChHHHHHHHcC
Q psy17862 94 YNDK--------------------NKRKILEAAEHNDSKTLEALLDLDSTLVDAV----------DKDGYSPLHRACYNG 143 (265)
Q Consensus 94 ~~~~--------------------~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~----------~~~g~t~l~~a~~~~ 143 (265)
..++ ...+++.|+..++.+++++|+. .+..++.. +..|.||||+|+..|
T Consensus 81 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~ 159 (285)
T 1wdy_A 81 IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK-RGANVNLRRKTKEDQERLRKGGATALMDAAEKG 159 (285)
T ss_dssp HHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH-TTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT
T ss_pred HcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHH-hCCCcccccccHHHHHhhccCCCcHHHHHHHcC
Confidence 8764 3479999999999999999999 46677665 778999999999999
Q ss_pred CHHHHHHHHHc-CCCCCCCCCCCChHHHHHHhcCC----HHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHH
Q psy17862 144 HANIVELLIQW-GADTQKTTIDGWTPLHSACKWNN----TECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMIL 218 (265)
Q Consensus 144 ~~~~~~~Ll~~-~~~~~~~~~~g~t~l~~a~~~~~----~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L 218 (265)
+.+++++|++. |++++..+..|.||||+|+..+. .+++++|++.|++++.++..|.||||+|+..|+. +++++|
T Consensus 160 ~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~L 238 (285)
T 1wdy_A 160 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL-GLVQRL 238 (285)
T ss_dssp CHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCH-HHHHHH
T ss_pred CHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCH-HHHHHH
Confidence 99999999998 99999999999999999999999 9999999999999999999999999999999998 788888
Q ss_pred hhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 219 LSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 219 ~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
++..|++++.+|..|.||||+|++.|+.+.++.|++.-.
T Consensus 239 l~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga 277 (285)
T 1wdy_A 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277 (285)
T ss_dssp HHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSS
T ss_pred HhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCC
Confidence 885699999999999999999999999888888887643
No 8
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=9.8e-37 Score=239.54 Aligned_cols=218 Identities=22% Similarity=0.265 Sum_probs=183.2
Q ss_pred HHHHHhhcCceeeeeeecccCcccccccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHc
Q psy17862 16 QLQESIRDGSFNIGQVSAWDDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYN 95 (265)
Q Consensus 16 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~ 95 (265)
.|..|++.|+++........ +.......+..+.||||+|+..|+.+++++|++. +.+++..|..|.||||+|
T Consensus 9 ~l~~A~~~g~~~~v~~ll~~----~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A--- 80 (231)
T 3aji_A 9 MICNLAYSGKLDELKERILA----DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQL-GVPVNDKDDAGWSPLHIA--- 80 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHH----CGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHH---
T ss_pred hHHHHHHhCCHHHHHHHHHh----chhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHh-CCCCCCcCCCCCCHHHHH---
Confidence 35667777775433222111 1111223345677888899999999999988887 788888888889999988
Q ss_pred CcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhc
Q psy17862 96 DKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKW 175 (265)
Q Consensus 96 ~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 175 (265)
+..++.+++++|++ .+.+++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..
T Consensus 81 ----------~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 149 (231)
T 3aji_A 81 ----------ASAGXDEIVKALLV-KGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK 149 (231)
T ss_dssp ----------HHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ----------HHcCHHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 67899999999999 5788899999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcch
Q psy17862 176 NNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIE 254 (265)
Q Consensus 176 ~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 254 (265)
++.+++++|++.|++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+++|+..++...++.|++
T Consensus 150 ~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~ 226 (231)
T 3aji_A 150 GNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERV-EEAKFLVTQ-GASIYIENKEEKTPLQVAKGGLGLILKRLAEG 226 (231)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCH-HHHHHHHHC-CCCCCCCCCCCCCHHHHHHhhHHHHHHHHHcc
Confidence 999999999999999999999999999999999998 788999988 89999999999999999998875444444443
No 9
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.8e-37 Score=259.89 Aligned_cols=206 Identities=19% Similarity=0.262 Sum_probs=189.0
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCc------------------CchHHHHHHhh
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDK------------------NKRKILEAAEH 108 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~------------------~~~~l~~a~~~ 108 (265)
.+..+.|+||+|+..|+.++|++|++. |++++..|..|.||||+|+..++ ...+++.|+..
T Consensus 16 ~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~ 94 (364)
T 3ljn_A 16 SDDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWHGQKPIHLAVMA 94 (364)
T ss_dssp CCHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCCBTTBCHHHHHHHT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccccCCCCHHHHHHHc
Confidence 345678999999999999999999988 88999999999999999998764 45799999999
Q ss_pred CCHHHHHHHHhcC---CCCccc-----------------CCCCCChHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCC
Q psy17862 109 NDSKTLEALLDLD---STLVDA-----------------VDKDGYSPLHRACYNG--HANIVELLIQWGADTQKTTIDGW 166 (265)
Q Consensus 109 ~~~~~~~~ll~~~---~~~~~~-----------------~~~~g~t~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~g~ 166 (265)
|+.+++++|++.. +..++. .+..|.||||+|+..| +.+++++|+++|++++..+..|.
T Consensus 95 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~ 174 (364)
T 3ljn_A 95 NKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADE 174 (364)
T ss_dssp TCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSC
T ss_pred CCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCC
Confidence 9999999999851 444444 7778999999999999 99999999999999999999999
Q ss_pred hHHHHHHhcCCHHHHHHHHhcCCC-----ccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHh
Q psy17862 167 TPLHSACKWNNTECVIVLLNYGVD-----VNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIAT 241 (265)
Q Consensus 167 t~l~~a~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~ 241 (265)
||||+|+..++.+++++|++.|++ ++.++..|+||||+|+..|+. +++++|+++ |++++..|..|.||||+|+
T Consensus 175 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 175 TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWE-DVAMRFVEM-GIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCH-HHHHHHHTT-TCCTTCCCTTSCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999998 999999999999999999998 799999987 8999999999999999999
Q ss_pred hcCCchhhhhcchh
Q psy17862 242 RSGIHYGLFETIEP 255 (265)
Q Consensus 242 ~~~~~~~~~~ll~~ 255 (265)
..|+.+.++.|++.
T Consensus 253 ~~g~~~~v~~Ll~~ 266 (364)
T 3ljn_A 253 RAAMVLLTKELLQK 266 (364)
T ss_dssp HTCCHHHHHHHHHH
T ss_pred HhChHHHHHHHHHc
Confidence 99999999999886
No 10
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.5e-36 Score=232.29 Aligned_cols=192 Identities=25% Similarity=0.310 Sum_probs=178.7
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
+.+.++|+.|+..|+.+.+++|+...+.+++..|..|.||||+| +..|+.+++++|++ .|.+++..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~ 68 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIA-------------VHNNDIEIAKALID-RGADINLQ 68 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCC
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCCC
Confidence 45789999999999999999999997879999999999999999 67899999999999 58899999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcC-CCccccCCCCCcHHHHHH
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLI-QWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYG-VDVNAQTNGGLTPLHLAA 206 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll-~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpL~~a~ 206 (265)
+..|.||||+|+..|+.+++++|+ ..+++++..+..|.||||+|+..++.+++++|++.| ++++.++..|.||||+|+
T Consensus 69 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~ 148 (201)
T 3hra_A 69 NSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAV 148 (201)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHH
Confidence 999999999999999999999999 556799999999999999999999999999999999 999999999999999999
Q ss_pred hCCC----hHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 207 SHSH----SRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 207 ~~~~----~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
..+. ..+++++|+++ |++++.+|..|.||||+|+..|+.+.++.|++.
T Consensus 149 ~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 200 (201)
T 3hra_A 149 GLREGNQLYQDIVKLLMEN-GADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200 (201)
T ss_dssp HSSCCSHHHHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTC
T ss_pred HhccchhhHHHHHHHHHHC-CCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhc
Confidence 9987 13899999998 899999999999999999999988888887753
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=1.2e-36 Score=245.74 Aligned_cols=191 Identities=26% Similarity=0.274 Sum_probs=121.7
Q ss_pred CCCCcccHHHHHhcCChHHHHHhhccCCCc---cccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCC
Q psy17862 48 QDKNKRNILEAAEHNDSKTLEALLDHDSTL---VDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTL 124 (265)
Q Consensus 48 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~---~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 124 (265)
+..+.||||+|+..|+.++|++|++. +.+ ++..|..|.||||+| +..|+.+++++|++ .|.+
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~ga~ 70 (282)
T 1oy3_D 6 TEDGDTALHLAVIHQHEPFLDFLLGF-SAGHEYLDLQNDLGQTALHLA-------------AILGEASTVEKLYA-AGAG 70 (282)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHH-HTTSGGGGCCCTTSCCHHHHH-------------HHHTCHHHHHHHHH-TTCC
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhc-CCCcccccccCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCC
Confidence 34567888888888888888888876 444 777888888888888 44555666666665 3555
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC-----------------------------------------------
Q psy17862 125 VDAVDKDGYSPLHRACYNGHANIVELLIQWGAD----------------------------------------------- 157 (265)
Q Consensus 125 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~----------------------------------------------- 157 (265)
++..+..|.||||+|+..|+.+++++|+++++.
T Consensus 71 ~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (282)
T 1oy3_D 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQ 150 (282)
T ss_dssp SSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGG
T ss_pred CCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhc
Confidence 555666666666666666666666666655433
Q ss_pred CCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCC-CCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccH
Q psy17862 158 TQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNG-GLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESA 236 (265)
Q Consensus 158 ~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~-g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~ 236 (265)
++..+..|.||||+|+..++.+++++|+++|++++.++.. |+||||+|+..|+. +++++|+++ |++++.+|..|.||
T Consensus 151 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~-~~v~~Ll~~-gad~~~~d~~g~tp 228 (282)
T 1oy3_D 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAA-SVLELLLKA-GADPTARMYGGRTP 228 (282)
T ss_dssp TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCH
T ss_pred CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCH-HHHHHHHHc-CCCCcccccCCCCH
Confidence 3444555666666666666666666666666666655533 66666666666655 455555555 56666666666666
Q ss_pred HHHHhhcCCchhhhhcchh
Q psy17862 237 REIATRSGIHYGLFETIEP 255 (265)
Q Consensus 237 l~~a~~~~~~~~~~~ll~~ 255 (265)
||+|+..|+.+.++.|++.
T Consensus 229 L~~A~~~~~~~~v~~Ll~~ 247 (282)
T 1oy3_D 229 LGSALLRPNPILARLLRAH 247 (282)
T ss_dssp HHHHHTSSCHHHHHHHHHT
T ss_pred HHHHHHcCCcHHHHHHHHc
Confidence 6666666655555555544
No 12
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=3.4e-36 Score=244.03 Aligned_cols=207 Identities=25% Similarity=0.328 Sum_probs=172.8
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCc--------------------CchHHHHHH
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDK--------------------NKRKILEAA 106 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~--------------------~~~~l~~a~ 106 (265)
.+..+.||||+|+..|+.++|++|++. +.+++.+|..|.||||+|+..++ ...+++.|+
T Consensus 55 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~ 133 (285)
T 3d9h_A 55 DAVSDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNAC 133 (285)
T ss_dssp SSCCSCCHHHHHHHTTCHHHHHHHHHT-TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH
T ss_pred CCccCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 445678999999999999999999998 88999999999999999988754 346889999
Q ss_pred hhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHh
Q psy17862 107 EHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLN 186 (265)
Q Consensus 107 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 186 (265)
..++.+++++|+. .+.+++.. ..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++
T Consensus 134 ~~~~~~~v~~Ll~-~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~ 211 (285)
T 3d9h_A 134 VSGSWDCVNLLLQ-HGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLE 211 (285)
T ss_dssp HHTCHHHHHHHHH-TTCCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHH
T ss_pred HcCHHHHHHHHHH-CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH
Confidence 9999999999988 45565543 448899999999999999999999999998888899999999999999999999999
Q ss_pred cCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhhhccC
Q psy17862 187 YGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCFNNLS 261 (265)
Q Consensus 187 ~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~ 261 (265)
.|++++. +..|.||||+|+..|+. +++++|+++ |++++.+|..|+|||++|+. +...++.|++..-..++
T Consensus 212 ~ga~~~~-~~~g~t~L~~A~~~~~~-~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~--~~~~~~~Ll~~~~a~l~ 281 (285)
T 3d9h_A 212 SGADVNQ-GKGQDSPLHAVVRTASE-ELACLLMDF-GADTQAKNAEGKRPVELVPP--ESPLAQLFLEREGASLP 281 (285)
T ss_dssp TTCCTTC-CBTTBCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCGGGGSCT--TSHHHHHHHHHC-----
T ss_pred CCCCCCC-CCCCCCHHHHHHHcCCH-HHHHHHHHC-CCCCCCcCCCCCCHHHHhcC--ccHHHHHHHHhhccCCC
Confidence 9988885 78889999999999887 788888887 88999999999999999983 36777777776444444
No 13
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.5e-36 Score=223.91 Aligned_cols=159 Identities=37% Similarity=0.585 Sum_probs=147.2
Q ss_pred cccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCC
Q psy17862 52 KRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKD 131 (265)
Q Consensus 52 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 131 (265)
+++|+.|++.|+.++|+.||+. |+++|.+|..|+||||+| +..++.++++.|+. .|.+++.++..
T Consensus 5 g~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~d~~g~t~l~~a-------------~~~~~~~~~~~ll~-~gad~~~~d~~ 69 (169)
T 4gpm_A 5 GKRLIEAAENGNKDRVKDLIEN-GADVNASDSDGRTPLHHA-------------AENGHKEVVKLLIS-KGADVNAKDSD 69 (169)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCCTT
T ss_pred HHHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHH-------------HHcCCHHHHHHHHh-cccchhhhccC
Confidence 4679999999999999999998 899999999999999999 67899999999998 68899999999
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCCh
Q psy17862 132 GYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHS 211 (265)
Q Consensus 132 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~ 211 (265)
|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+.
T Consensus 70 g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~ 149 (169)
T 4gpm_A 70 GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNE 149 (169)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHHHHHHhhCCCCCCc
Q psy17862 212 RDVLMILLSHPNVDPH 227 (265)
Q Consensus 212 ~~~~~~L~~~~~~~~~ 227 (265)
+++++|+++ |++++
T Consensus 150 -~iv~~Ll~~-GA~ie 163 (169)
T 4gpm_A 150 -EVVKLLEKQ-GGWLE 163 (169)
T ss_dssp -HHHHHHHTC------
T ss_pred -HHHHHHHHC-CCCcC
Confidence 799999988 78764
No 14
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=238.09 Aligned_cols=185 Identities=25% Similarity=0.347 Sum_probs=150.0
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD 129 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 129 (265)
.+.||||+|+..|+.+++++|++. |++++..|..|.||||+| +..|+.+++++|++ .+.+++. +
T Consensus 35 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~-~ 98 (261)
T 2xai_A 35 DHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNA-------------CVSGSWDCVNLLLQ-HGASVQP-E 98 (261)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHHTCHHHHHHHHH-TTCCSSC-S
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHH-------------HHcCCHHHHHHHHH-CCCCCCC-C
Confidence 455666666666666666666655 556666666666666666 77899999999998 4666654 4
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCC
Q psy17862 130 KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHS 209 (265)
Q Consensus 130 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~ 209 (265)
..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++. +..|.||||+|+..|
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~ 177 (261)
T 2xai_A 99 SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTA 177 (261)
T ss_dssp CTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHT
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcC
Confidence 5589999999999999999999999999999999999999999999999999999999999985 788999999999999
Q ss_pred ChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 210 HSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 210 ~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
+. +++++|++. |++++.+|..|+||+|+|+..+ ..++.+++.
T Consensus 178 ~~-~~v~~Ll~~-gad~~~~d~~g~tpl~~A~~~~--~~~~~ll~~ 219 (261)
T 2xai_A 178 SE-ELACLLMDF-GADTQAKNAEGKRPVELVPPES--PLAQLFLER 219 (261)
T ss_dssp CH-HHHHHHHHT-TCCTTCCCTTSCCGGGGSCTTC--THHHHHHHC
T ss_pred CH-HHHHHHHHc-CCCCCCcCCCCCChhhhccccc--cHHHHHHhc
Confidence 87 788888887 8999999999999999998664 455555554
No 15
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.1e-35 Score=231.39 Aligned_cols=182 Identities=20% Similarity=0.299 Sum_probs=145.6
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCC--Ccccc-CCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcC-C
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDS--TLVDA-VDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLD-S 122 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~--~~~~~-~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~-~ 122 (265)
.+..+.||||+|+..|+.+++++|++. + .+++. .+..|.||||+| +..|+.+++++|+..+ +
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~L~~A-------------~~~~~~~~~~~Ll~~g~~ 97 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSK-MENVNLDDYPDDSGWTPFHIA-------------CSVGNLEVVKSLYDRPLK 97 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-CTTCCGGGCCCTTSCCHHHHH-------------HHHCCHHHHHHHHSSSSC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhc-cccccccccCCCCCCCHHHHH-------------HHcCCHHHHHHHHhCCCC
Confidence 445566777777777777777777776 4 44444 666777777777 6688888888888842 2
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcC-CCccccCCCCCcH
Q psy17862 123 TLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYG-VDVNAQTNGGLTP 201 (265)
Q Consensus 123 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tp 201 (265)
.+++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.+++++|++.| ++++.+|..|+||
T Consensus 98 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~ 177 (228)
T 2dzn_A 98 PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177 (228)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCH
T ss_pred cccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCH
Confidence 677778888888888888888888888888888888888888888898888888888888888888 8888888888889
Q ss_pred HHHHHhCCChHHHHHHHh-hCCCCCCcccCCCCccHHHHHhhcC
Q psy17862 202 LHLAASHSHSRDVLMILL-SHPNVDPHILSTSNESAREIATRSG 244 (265)
Q Consensus 202 L~~a~~~~~~~~~~~~L~-~~~~~~~~~~~~~g~t~l~~a~~~~ 244 (265)
||+|+..|+. +++++|+ +. |++++.+|..|.||+++|++.+
T Consensus 178 L~~A~~~~~~-~~v~~Ll~~~-ga~~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 178 LFHALAEGHG-DAAVLLVEKY-GAEYDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp HHHHHHTTCH-HHHHHHHHHH-CCCSCCBCTTSCBGGGGCSSTT
T ss_pred HHHHHHcCCH-HHHHHHHHhc-CCCCCccCCCCCcHHHHHHHHH
Confidence 9888888887 6777777 54 8888888888889988886653
No 16
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=231.73 Aligned_cols=206 Identities=24% Similarity=0.271 Sum_probs=182.1
Q ss_pred CCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCc---------------------CchHHHHHH
Q psy17862 48 QDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDK---------------------NKRKILEAA 106 (265)
Q Consensus 48 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~---------------------~~~~l~~a~ 106 (265)
++.+.++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..++ ...+++.|+
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~ 84 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEA-GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT 84 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence 45567788888888888888888877 67788888888888888887654 246888889
Q ss_pred hhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCC-HHHHHHHH
Q psy17862 107 EHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNN-TECVIVLL 185 (265)
Q Consensus 107 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~-~~~v~~Ll 185 (265)
..++.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..+. .+++++|+
T Consensus 85 ~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~ 163 (240)
T 3eu9_A 85 RQGHLSMVVQLMK-YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLL 163 (240)
T ss_dssp HHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHH
T ss_pred HcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHH
Confidence 9999999999998 578888999999999999999999999999999999999999999999999996665 89999999
Q ss_pred hcCCCccccCC-CCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 186 NYGVDVNAQTN-GGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 186 ~~g~~~~~~~~-~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
+.|++++..+. .|.||||+|+..|+. +++++|+++ |++++..|..|.||+++|++.|+.+.++.|++...
T Consensus 164 ~~~~~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~ 234 (240)
T 3eu9_A 164 TFNVSVNLGDKYHKNTALHWAVLAGNT-TVISLLLEA-GANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234 (240)
T ss_dssp HTTCCTTCCCTTTCCCHHHHHHHHTCH-HHHHHHHHH-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC-
T ss_pred hcCCCcchhhccCCCcHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhh
Confidence 99999999887 899999999999998 788888887 89999999999999999999999998888887654
No 17
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.5e-36 Score=239.47 Aligned_cols=197 Identities=25% Similarity=0.264 Sum_probs=177.5
Q ss_pred CCCCcccHHHHHhcCChHHHHHhhccCC---CccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCC
Q psy17862 48 QDKNKRNILEAAEHNDSKTLEALLDHDS---TLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTL 124 (265)
Q Consensus 48 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~---~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 124 (265)
+..+.||||+|+..|+.+++++|+.... .+++..|..|.||||+| +..|+.+++++|+. .|.+
T Consensus 5 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~ 70 (236)
T 1ikn_D 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLA-------------VITNQPEIAEALLG-AGCD 70 (236)
T ss_dssp --CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHH-------------HHTTCHHHHHCCCS-CCCC
T ss_pred CCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCC
Confidence 4567899999999999999999998743 36899999999999999 67899999999998 5888
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC------CCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCC-C
Q psy17862 125 VDAVDKDGYSPLHRACYNGHANIVELLIQWGAD------TQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTN-G 197 (265)
Q Consensus 125 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~------~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~-~ 197 (265)
++..+..|.||||+|+..|+.+++++|++.+++ ++..+..|.||||+|+..++.+++++|+++|++++.++. .
T Consensus 71 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 150 (236)
T 1ikn_D 71 PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCN 150 (236)
T ss_dssp SCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTT
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 999999999999999999999999999999875 466788899999999999999999999999999999997 9
Q ss_pred CCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhhhcc
Q psy17862 198 GLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCFNNL 260 (265)
Q Consensus 198 g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~ 260 (265)
|.||||+|+..|+. +++++|+++ |++++.+|..|.|||++|+..|+.+.++.|++.-.+..
T Consensus 151 g~tpL~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 151 GRTALHLAVDLQNP-DLVSLLLKC-GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL 211 (236)
T ss_dssp CCCHHHHHHHTTCH-HHHHHHHTT-TCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG
T ss_pred CCCHHHHHHHcCCH-HHHHHHHHc-CCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh
Confidence 99999999999998 789999987 89999999999999999999999999999988866544
No 18
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=6.7e-36 Score=251.16 Aligned_cols=207 Identities=22% Similarity=0.270 Sum_probs=186.4
Q ss_pred CCCcccHHHHHhcCChHHHHHhhc-------cCCCccccCCCCCCcHHHHHHHcCc--------------------CchH
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLD-------HDSTLVDAVDKDGYSPLHRACYNDK--------------------NKRK 101 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~-------~~~~~~~~~d~~g~tpl~~A~~~~~--------------------~~~~ 101 (265)
..+.||||+|+..|+.+++++|+. ..|++++..|..|.||||+|+..++ ...+
T Consensus 123 ~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~ 202 (373)
T 2fo1_E 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSA 202 (373)
T ss_dssp SSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred cCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCH
Confidence 468899999999999998888873 4489999999999999999998765 3479
Q ss_pred HHHHHhhCCHHHHHHHHhcCC--CCcccCCCCCChHHHHHHHcC---CHHHHHHHHHcCCCCCC--------CCCCCChH
Q psy17862 102 ILEAAEHNDSKTLEALLDLDS--TLVDAVDKDGYSPLHRACYNG---HANIVELLIQWGADTQK--------TTIDGWTP 168 (265)
Q Consensus 102 l~~a~~~~~~~~~~~ll~~~~--~~~~~~~~~g~t~l~~a~~~~---~~~~~~~Ll~~~~~~~~--------~~~~g~t~ 168 (265)
++.|+..|+.+++++|+.... .+++..+..|.||||+|+..+ +.+++++|+++|++++. .+..|.||
T Consensus 203 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~ 282 (373)
T 2fo1_E 203 LHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282 (373)
T ss_dssp HHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCT
T ss_pred HHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCH
Confidence 999999999999999998532 678888999999999999998 89999999999999886 56789999
Q ss_pred HHHHHhcCCHHHHHHHHhcC-CCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCch
Q psy17862 169 LHSACKWNNTECVIVLLNYG-VDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHY 247 (265)
Q Consensus 169 l~~a~~~~~~~~v~~Ll~~g-~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~ 247 (265)
||+|+..++.+++++|++.+ ++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.|||++|+..|+.+
T Consensus 283 Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~-~iv~~Ll~~-gad~~~~d~~g~t~l~~A~~~g~~~ 360 (373)
T 2fo1_E 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI-EVVMYLIQQ-GASVEAVDATDHTARQLAQANNHHN 360 (373)
T ss_dssp HHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH-HHHHHHHHT-TCCSSCCCSSSCCHHHHHHHTTCHH
T ss_pred HHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCccCCCCCCCCHHHHHHHcCCHH
Confidence 99999999999999999886 99999999999999999999998 788999997 8999999999999999999999888
Q ss_pred hhhhcchhhh
Q psy17862 248 GLFETIEPCF 257 (265)
Q Consensus 248 ~~~~ll~~~~ 257 (265)
++..|++...
T Consensus 361 iv~~Ll~~~a 370 (373)
T 2fo1_E 361 IVDIFDRCRP 370 (373)
T ss_dssp HHHHHHTTC-
T ss_pred HHHHHHhcCc
Confidence 8888887654
No 19
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.8e-35 Score=241.13 Aligned_cols=226 Identities=24% Similarity=0.298 Sum_probs=166.1
Q ss_pred CCcchhhhHHHHHHHHHHHHhhcCceeeeeeecccCcccccccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCcccc
Q psy17862 1 MSDDEDSNELTEKMQQLQESIRDGSFNIGQVSAWDDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDA 80 (265)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~ 80 (265)
|++..-.+...+.+..+.......... .........+..+.++|+.|+..|+.++|++|++. |.+++.
T Consensus 1 ~~~~~a~~~~~~~l~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~ 68 (299)
T 1s70_B 1 MKMADAKQKRNEQLKRWIGSETDLEPP-----------VVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINY 68 (299)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTTSSCCS-----------CCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTC
T ss_pred CchhHHHHHHHHHHHHHHccccccccc-----------cccCcccccccCCccHHHHHHHcCCHHHHHHHHHc-CCCCcc
Confidence 555555555555555555544332210 01112223334567999999999999999999998 889999
Q ss_pred CCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy17862 81 VDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQK 160 (265)
Q Consensus 81 ~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 160 (265)
.|..|.||||+| +..|+.+++++|++ .|.+++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 69 ~~~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~ 134 (299)
T 1s70_B 69 ANVDGLTALHQA-------------CIDDNVDMVKFLVE-NGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGA 134 (299)
T ss_dssp BCTTCCBHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred cCCCCCCHHHHH-------------HHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Confidence 999999999999 55777888888887 4677777777788888888888888888888888777665
Q ss_pred CCC------------------------------------------------------------CCChHHHHHHhcCCHHH
Q psy17862 161 TTI------------------------------------------------------------DGWTPLHSACKWNNTEC 180 (265)
Q Consensus 161 ~~~------------------------------------------------------------~g~t~l~~a~~~~~~~~ 180 (265)
.+. .|.||||+|+..++.++
T Consensus 135 ~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~ 214 (299)
T 1s70_B 135 VNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEV 214 (299)
T ss_dssp CCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHH
T ss_pred cCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHH
Confidence 543 46677778888888888
Q ss_pred HHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 181 VIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 181 v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
+++|++.|++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+++|+... ...+..++++
T Consensus 215 v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~-gad~~~~d~~g~t~l~~A~~~~-~~~l~~l~~~ 286 (299)
T 1s70_B 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKE-EACRILVEN-LCDMEAVNKVGQTAFDVADEDI-LGYLEELQKK 286 (299)
T ss_dssp HHHHHTTTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCTTTSCCSGG-GHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcCCCCCcHHHHHHhcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHHH-HHHHHHHHHH
Confidence 8888888888888888888888888888877 677777776 7888888888888888886543 5555555543
No 20
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.6e-35 Score=250.90 Aligned_cols=202 Identities=29% Similarity=0.447 Sum_probs=164.5
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCc--------------------CchHHHHHHhh
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDK--------------------NKRKILEAAEH 108 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~--------------------~~~~l~~a~~~ 108 (265)
..+.+||++|+..|+.+++++|+.. +.+++..+..|.||||+|+..++ ...+++.|+..
T Consensus 177 ~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 255 (437)
T 1n11_A 177 KNGLTPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 255 (437)
T ss_dssp SSCCCHHHHHHHTTCHHHHHHHGGG-TCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHC
Confidence 3566778888888888888888777 66677777778888888876643 34688888888
Q ss_pred CCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcC
Q psy17862 109 NDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYG 188 (265)
Q Consensus 109 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g 188 (265)
|+.+++++|+. .+.+.+..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+.+++.+++++|+++|
T Consensus 256 g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g 334 (437)
T 1n11_A 256 GHAEMVALLLS-KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 334 (437)
T ss_dssp TCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTT
T ss_pred CCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcC
Confidence 88888888887 46777788888888888888888888888888888888888888899999999999999999999999
Q ss_pred CCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 189 VDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 189 ~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
++++.++..|+||||+|+..|+. +++++|+++ |++++.+|.+|.||+++|++.|+. .+.++|+.
T Consensus 335 ad~n~~~~~g~t~L~~A~~~g~~-~iv~~Ll~~-ga~~~~~~~~g~t~l~~A~~~g~~-~~~~~l~~ 398 (437)
T 1n11_A 335 ADVNAKTKLGYSPLHQAAQQGHT-DIVTLLLKN-GASPNEVSSDGTTPLAIAKRLGYI-SVTDVLKV 398 (437)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCSCCCCSSSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHCChH-HHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCcH-HHHHHHHh
Confidence 99888888899999999988887 788888887 888888888999999999888854 44444443
No 21
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=6e-35 Score=242.68 Aligned_cols=221 Identities=27% Similarity=0.354 Sum_probs=138.4
Q ss_pred HHHHHHHHhhcCceeeeeeecccCcccccccC-CCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHH
Q psy17862 13 KMQQLQESIRDGSFNIGQVSAWDDDVVGIEDS-RNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHR 91 (265)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~ 91 (265)
.-..|..|++.|+....... +.....+ ...+..+.||||+|+..|+.++|++|++. |++++..|..|.||||+
T Consensus 24 ~~~~L~~A~~~g~~~~v~~l-----l~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~ 97 (351)
T 3utm_A 24 KKDELLEAARSGNEEKLMAL-----LTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAKDKGGLVPLHN 97 (351)
T ss_dssp HHHHHHHHHHHTCHHHHHHH-----CCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHH
T ss_pred cchhHHHHHHcCCHHHHHHH-----HHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHH
Confidence 44778999999987432221 1122222 22344578999999999999999999998 89999999999999999
Q ss_pred HHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC---------
Q psy17862 92 ACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTT--------- 162 (265)
Q Consensus 92 A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--------- 162 (265)
|+. .|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 98 A~~-------------~g~~~iv~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~ 163 (351)
T 3utm_A 98 ACS-------------YGHYEVTELLLK-HGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDM 163 (351)
T ss_dssp HHH-------------TTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred HHH-------------CCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHH
Confidence 954 555555555555 345555555555556666655555555555555555544322
Q ss_pred ---------------------------------------------CCCChHHHHHHhc---CCHHHHHHHHhcCCCcccc
Q psy17862 163 ---------------------------------------------IDGWTPLHSACKW---NNTECVIVLLNYGVDVNAQ 194 (265)
Q Consensus 163 ---------------------------------------------~~g~t~l~~a~~~---~~~~~v~~Ll~~g~~~~~~ 194 (265)
..|.||||+|+.. +..+++++|++.|++++.+
T Consensus 164 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~ 243 (351)
T 3utm_A 164 APTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEK 243 (351)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCC
T ss_pred HhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCc
Confidence 2344555555555 3355555555555555555
Q ss_pred CCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 195 TNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 195 ~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
+..|.||||+|+..|+. +++++|+++ |++++.+|..|.||||+|+..|+.+.++.|++.
T Consensus 244 ~~~g~t~L~~A~~~g~~-~~v~~Ll~~-ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 302 (351)
T 3utm_A 244 NKDFMTPLHVAAERAHN-DVMEVLHKH-GAKMNALDSLGQTALHRAALAGHLQTCRLLLSY 302 (351)
T ss_dssp CTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCH-HHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 55555555555555555 455555554 555555555555555555555555555555544
No 22
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=5.2e-35 Score=250.56 Aligned_cols=206 Identities=27% Similarity=0.330 Sum_probs=189.1
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCc--------------------CchHHHHHH
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDK--------------------NKRKILEAA 106 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~--------------------~~~~l~~a~ 106 (265)
.+..+.+||++|+..|+.+++++|++. +.+++..+..|.||||+|+..++ ...+++.|+
T Consensus 142 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 220 (437)
T 1n11_A 142 MTKKGFTPLHVAAKYGKVRVAELLLER-DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAA 220 (437)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 345677899999999999999999988 88899999999999999988754 247899999
Q ss_pred hhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHh
Q psy17862 107 EHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLN 186 (265)
Q Consensus 107 ~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~ 186 (265)
..++.+++++|+. .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|++
T Consensus 221 ~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~ 299 (437)
T 1n11_A 221 KQNQVEVARSLLQ-YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIK 299 (437)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence 9999999999998 577888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhh
Q psy17862 187 YGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPC 256 (265)
Q Consensus 187 ~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 256 (265)
+|++++.++..|+||||+|+..|+. +++++|+++ |++++.+|..|.||||+|+..|+.+.++.|++.-
T Consensus 300 ~g~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g 367 (437)
T 1n11_A 300 HGVMVDATTRMGYTPLHVASHYGNI-KLVKFLLQH-QADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367 (437)
T ss_dssp HTCCTTCCCSSCCCHHHHHHHSSCS-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCccCCCCCCCCCCHHHHHHHcCcH-HHHHHHHhc-CCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCc
Confidence 9999999999999999999999998 788999988 8999999999999999999999999999888764
No 23
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.9e-36 Score=237.50 Aligned_cols=193 Identities=23% Similarity=0.280 Sum_probs=152.5
Q ss_pred CCCCcccHHHHHhcC-------------ChHHHHHhhccCCCccc-cCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHH
Q psy17862 48 QDKNKRNILEAAEHN-------------DSKTLEALLDHDSTLVD-AVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKT 113 (265)
Q Consensus 48 ~~~~~~~l~~A~~~g-------------~~~~v~~ll~~~~~~~~-~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~ 113 (265)
+..+.||||+|+..| +.+++++|+.. +.+++ ..|..|.||||+| +..|+.++
T Consensus 7 d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~d~~g~t~L~~A-------------~~~g~~~~ 72 (253)
T 1yyh_A 7 GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ-GASLHNQTDRTGETALHLA-------------ARYSRSDA 72 (253)
T ss_dssp ----------------------------------------------CCCTTSCCHHHHH-------------HHTTCHHH
T ss_pred CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc-cCCcccccCCCCCcHHHHH-------------HHcCCHHH
Confidence 356789999999987 89999999998 66664 4589999999999 67899999
Q ss_pred HHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCC-CCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCcc
Q psy17862 114 LEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGA-DTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVN 192 (265)
Q Consensus 114 ~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~ 192 (265)
+++|++ .|.+++..+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+++++|++.|++++
T Consensus 73 v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~ 151 (253)
T 1yyh_A 73 AKRLLE-ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVN 151 (253)
T ss_dssp HHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTT
T ss_pred HHHHHH-cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCC
Confidence 999999 588899999999999999999999999999999987 899999999999999999999999999999999999
Q ss_pred ccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 193 AQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 193 ~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
.++..|.||||+|+..|+. +++++|++. |++++.+|..|.||||+|+..|+.+.++.|++...
T Consensus 152 ~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 152 AVDDLGKSALHWAAAVNNV-DAAVVLLKN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp CBCTTSCBHHHHHHHHTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CcCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 9999999999999999998 788999887 89999999999999999999999999998888743
No 24
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=2.6e-35 Score=237.91 Aligned_cols=183 Identities=26% Similarity=0.279 Sum_probs=154.2
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCC----
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDS---- 122 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~---- 122 (265)
.+..+.||||+|+..|+.++|++|++. |++++..|..|.||||+| +..++.+++++|+..+.
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A-------------~~~~~~~~v~~Ll~~~~~~~~ 106 (282)
T 1oy3_D 41 QNDLGQTALHLAAILGEASTVEKLYAA-GAGVLVAERGGHTALHLA-------------CRVRAHTCACVLLQPRPSHPR 106 (282)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTSCCHHHHH-------------TTTTCHHHHHHHSSSCCSSCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHH-------------HHcCCcchhHhhhccCCCCch
Confidence 345678999999999999999999998 899999999999999999 66788999999987432
Q ss_pred ------------------------------------------CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Q psy17862 123 ------------------------------------------TLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQK 160 (265)
Q Consensus 123 ------------------------------------------~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~ 160 (265)
..++..+..|.||||+|+..|+.+++++|+++|++++.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 186 (282)
T 1oy3_D 107 DASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK 186 (282)
T ss_dssp CC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred hhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 23567788999999999999999999999999999999
Q ss_pred CCCC-CChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHH
Q psy17862 161 TTID-GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREI 239 (265)
Q Consensus 161 ~~~~-g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~ 239 (265)
.+.. |.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+++
T Consensus 187 ~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~tpl~~ 264 (282)
T 1oy3_D 187 PEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP-ILARLLRAH-GAPEPEDGGDKLSPCSS 264 (282)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH-HHHHHHHHT-TCCCCCCC---------
T ss_pred CCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCc-HHHHHHHHc-CCCcCcCCCcccccccc
Confidence 8854 99999999999999999999999999999999999999999999997 799999998 99999999999999999
Q ss_pred HhhcCC
Q psy17862 240 ATRSGI 245 (265)
Q Consensus 240 a~~~~~ 245 (265)
|.....
T Consensus 265 a~~~~~ 270 (282)
T 1oy3_D 265 SGSDSD 270 (282)
T ss_dssp ------
T ss_pred cCCccc
Confidence 987753
No 25
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=6.3e-36 Score=238.69 Aligned_cols=191 Identities=20% Similarity=0.181 Sum_probs=169.0
Q ss_pred CcccHHHHHhcCChHHH----HHhhccCCCcccc----CCCCCCcHHHHHHHcCcCchHHHHHHhh---CCHHHHHHHHh
Q psy17862 51 NKRNILEAAEHNDSKTL----EALLDHDSTLVDA----VDKDGYSPLHRACYNDKNKRKILEAAEH---NDSKTLEALLD 119 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v----~~ll~~~~~~~~~----~d~~g~tpl~~A~~~~~~~~~l~~a~~~---~~~~~~~~ll~ 119 (265)
+.|+||.|+..|+.+.| ++|+.. +.+++. .|..|.||||+| +.. |+.+++++|++
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~-g~~i~~~~~~~d~~g~t~L~~A-------------~~~~~~g~~~~v~~Ll~ 67 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWN-SKYLTDSAYTEGSTGKTCLMKA-------------VLNLQDGVNACIMPLLQ 67 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHH-TCCTTSGGGSBTTTTBCHHHHH-------------HHTCBTTBCTTHHHHHH
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHc-CCCcccccccCCCCCCCHHHHH-------------HHccccchHHHHHHHHh
Confidence 57899999999999855 555556 889998 899999999999 556 88999999998
Q ss_pred cCCCCcc-----------cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-------------CChHHHHHHhc
Q psy17862 120 LDSTLVD-----------AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTID-------------GWTPLHSACKW 175 (265)
Q Consensus 120 ~~~~~~~-----------~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~-------------g~t~l~~a~~~ 175 (265)
. +...+ ..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..
T Consensus 68 ~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 146 (256)
T 2etb_A 68 I-DKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146 (256)
T ss_dssp H-HHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT
T ss_pred c-CCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHc
Confidence 4 43333 23467999999999999999999999999999998876 99999999999
Q ss_pred CCHHHHHHHHh---cCCCccccCCCCCcHHHHHHh--CCChHH-------HHHHHhhCCCCCC-------cccCCCCccH
Q psy17862 176 NNTECVIVLLN---YGVDVNAQTNGGLTPLHLAAS--HSHSRD-------VLMILLSHPNVDP-------HILSTSNESA 236 (265)
Q Consensus 176 ~~~~~v~~Ll~---~g~~~~~~~~~g~tpL~~a~~--~~~~~~-------~~~~L~~~~~~~~-------~~~~~~g~t~ 236 (265)
++.+++++|++ .|++++.+|..|+||||+|+. .++. + ++++|+++ |+++ +.+|..|.||
T Consensus 147 ~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~-~~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~~d~~g~tp 224 (256)
T 2etb_A 147 KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSP-ENSALVIHMYDGLLQM-GARLCPTVQLEEISNHQGLTP 224 (256)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCH-HHHHHHHHHHHHHHHH-HHHHSTTCCGGGCCCTTSCCH
T ss_pred CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCc-hhhHHHHHHHHHHHHc-CCCcccccccccccCCCCCCH
Confidence 99999999999 999999999999999999998 6665 4 88999887 8898 8999999999
Q ss_pred HHHHhhcCCchhhhhcchhhhh
Q psy17862 237 REIATRSGIHYGLFETIEPCFN 258 (265)
Q Consensus 237 l~~a~~~~~~~~~~~ll~~~~~ 258 (265)
||+|+..|+.+.++.||+....
T Consensus 225 L~~A~~~g~~~~v~~Ll~~g~~ 246 (256)
T 2etb_A 225 LKLAAKEGKIEIFRHILQREFS 246 (256)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHhCCCC
Confidence 9999999999999999987544
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1e-34 Score=227.50 Aligned_cols=191 Identities=24% Similarity=0.251 Sum_probs=174.1
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcC-CCCccc-C
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLD-STLVDA-V 128 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~-~~~~~~-~ 128 (265)
+.||||+|+..|+.++|++|++.++...+..|..|.||||+| +..|+.+++++|+..+ ..+++. .
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~~~~~~~~~~~~ 68 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWS-------------VSFQAHEITSFLLSKMENVNLDDYP 68 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHTCTTCCGGGCC
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHH-------------HHcCCHHHHHHHHhccccccccccC
Confidence 578999999999999999999995555666899999999999 6789999999999953 145555 7
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcC--CCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWG--ADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAA 206 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~--~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~ 206 (265)
+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+
T Consensus 69 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 148 (228)
T 2dzn_A 69 DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAA 148 (228)
T ss_dssp CTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 889999999999999999999999998 889999999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 207 SHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 207 ~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
..|+. +++++|++...++++.+|..|.||||+|+..|+.+.++.|+++
T Consensus 149 ~~~~~-~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ 196 (228)
T 2dzn_A 149 SVGSL-KLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196 (228)
T ss_dssp HTTCH-HHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HcCCH-HHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 99998 7899999884499999999999999999999999999999833
No 27
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=5e-35 Score=234.25 Aligned_cols=189 Identities=26% Similarity=0.348 Sum_probs=174.6
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD 129 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 129 (265)
.+.||||+|+..|+.++|++|++. |.+++..|..|.||||+| +..|+.+++++|++ .|.+++..+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~~ 66 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEA-------------CLGGHLSCVKILLK-HGAQVNGVT 66 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTCCCHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHH-------------HHcCCHHHHHHHHH-CCCCCCCCC
Confidence 467999999999999999999998 889999999999999999 67899999999999 578999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCC
Q psy17862 130 KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHS 209 (265)
Q Consensus 130 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~ 209 (265)
..|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 145 (261)
T 2xai_A 67 ADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ 145 (261)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhC
Confidence 9999999999999999999999999999985 456999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 210 HSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 210 ~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
+. +++++|++. |++++. +..|.||||+|+..|+.+.++.|++.-.
T Consensus 146 ~~-~~v~~Ll~~-g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~ga 190 (261)
T 2xai_A 146 QR-ACVKKLLES-GADVNQ-GKGQDSPLHAVARTASEELACLLMDFGA 190 (261)
T ss_dssp CH-HHHHHHHHH-TCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CH-HHHHHHHHc-CCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCC
Confidence 98 788888887 889885 8899999999999999999998887643
No 28
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.3e-34 Score=231.41 Aligned_cols=203 Identities=23% Similarity=0.314 Sum_probs=187.0
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccC-CCCCCcHHHHHHHcCc--------------------CchHHHHHHhh
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAV-DKDGYSPLHRACYNDK--------------------NKRKILEAAEH 108 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-d~~g~tpl~~A~~~~~--------------------~~~~l~~a~~~ 108 (265)
.+.++|+.|+..|+.++|++|++. +.+++.. +..|.||||+|+..++ ...+++.|+..
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 82 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIA 82 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred ccchHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHc
Confidence 356899999999999999999998 7888887 7889999999998764 34799999999
Q ss_pred CCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC----------CCCCChHHHHHHhcCCH
Q psy17862 109 NDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT----------TIDGWTPLHSACKWNNT 178 (265)
Q Consensus 109 ~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~----------~~~g~t~l~~a~~~~~~ 178 (265)
|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..++.
T Consensus 83 ~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 161 (285)
T 1wdy_A 83 GSVKLLKLFLS-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161 (285)
T ss_dssp TCHHHHHHHHH-TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCH
T ss_pred CCHHHHHHHHH-cCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCH
Confidence 99999999999 57888999999999999999999999999999999999877 77899999999999999
Q ss_pred HHHHHHHhc-CCCccccCCCCCcHHHHHHhCCCh---HHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcch
Q psy17862 179 ECVIVLLNY-GVDVNAQTNGGLTPLHLAASHSHS---RDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIE 254 (265)
Q Consensus 179 ~~v~~Ll~~-g~~~~~~~~~g~tpL~~a~~~~~~---~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 254 (265)
+++++|++. |++++.++..|.||||+|+..++. ..++++|++. |++++.++..|.||||+|+..|+.+.++.|++
T Consensus 162 ~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 240 (285)
T 1wdy_A 162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLE 240 (285)
T ss_dssp HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 999999988 999999999999999999999882 3788999987 89999999999999999999999999999988
Q ss_pred h
Q psy17862 255 P 255 (265)
Q Consensus 255 ~ 255 (265)
.
T Consensus 241 ~ 241 (285)
T 1wdy_A 241 Q 241 (285)
T ss_dssp S
T ss_pred c
Confidence 4
No 29
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.9e-34 Score=235.69 Aligned_cols=236 Identities=21% Similarity=0.240 Sum_probs=141.6
Q ss_pred HHHHHHHHhhcCceeeeeeecccCcccccccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHH
Q psy17862 13 KMQQLQESIRDGSFNIGQVSAWDDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRA 92 (265)
Q Consensus 13 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A 92 (265)
--..|..|+++|++++..... + .+.+.+......+.||||+|+..|+.++|++|++. |++++..+..+.+|++.+
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL--~--~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~-ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLL--E--GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHH--H--HTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHH
T ss_pred CChHHHHHHHcCCHHHHHHHH--H--CCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCchhhhccCCCchhHHH
Confidence 345688999999975543321 1 12222222333478999999999999999999987 777776666666666665
Q ss_pred HHcCc--------------------CchHHHHHHhhCCHHHHHHHHhcCCCCccc----------CCCCCChHHHHHHHc
Q psy17862 93 CYNDK--------------------NKRKILEAAEHNDSKTLEALLDLDSTLVDA----------VDKDGYSPLHRACYN 142 (265)
Q Consensus 93 ~~~~~--------------------~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~----------~~~~g~t~l~~a~~~ 142 (265)
+..+. ...+++.|+..|+.++++.|+.. |.+++. .+..|.||||+|+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~-ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~ 178 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR-GANVNLRRKTKEDQERLRKGGATALMDAAEK 178 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCCC-----CTTCSCCHHHHHHHH
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHc-CCCcchhhccccccccccCCCCcHHHHHHHC
Confidence 54321 23456666666666666666652 333322 223455666666666
Q ss_pred CCHHHHHHHHH-cCCCCCCCCCCCChHHHHHHhcCC----HHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHH
Q psy17862 143 GHANIVELLIQ-WGADTQKTTIDGWTPLHSACKWNN----TECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMI 217 (265)
Q Consensus 143 ~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~a~~~~~----~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~ 217 (265)
|+.+++++|++ .|++++..+..|.|+++.++..+. ..++++|+++|++++.++..|+||||+|+..|+. +++++
T Consensus 179 g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~-~~v~~ 257 (337)
T 4g8k_A 179 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL-GLVQR 257 (337)
T ss_dssp TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCH-HHHHH
T ss_pred CCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhh-HHHHH
Confidence 66666666664 356666666666666655544332 3355666666666666666666666666666655 44444
Q ss_pred HhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 218 LLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 218 L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
|+...+++++.+|..|+||||+|++.|+.+.|+.||+.
T Consensus 258 Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 295 (337)
T 4g8k_A 258 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKR 295 (337)
T ss_dssp HHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 44444566666666666666666666655555555543
No 30
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.1e-35 Score=234.98 Aligned_cols=191 Identities=25% Similarity=0.345 Sum_probs=151.0
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCC-------ccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHH-HHHHHHhcC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDST-------LVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSK-TLEALLDLD 121 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~-------~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~-~~~~ll~~~ 121 (265)
.+.++|+.|+..|+.++|++||+.... .++..+..|.|||++| +..++.+ +++.|+. .
T Consensus 10 ~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a-------------~~~~~~~~~v~~Ll~-~ 75 (269)
T 4b93_B 10 REVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQC-------------PKCAPAQKRLAKVPA-S 75 (269)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTCC------------------------------------------------------C
T ss_pred cchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHH-------------HHhCCHHHHHHHHHH-C
Confidence 456899999999999999999987432 2456778899999999 4445544 5666776 6
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcH
Q psy17862 122 STLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTP 201 (265)
Q Consensus 122 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tp 201 (265)
|++++..|..|.||||+|+..|+.+++++|++.|++++..+..|.||+++|+..++.+++++|++.|++++.+|..|+||
T Consensus 76 Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~Tp 155 (269)
T 4b93_B 76 GLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTP 155 (269)
T ss_dssp CCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCH
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhh
Q psy17862 202 LHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPC 256 (265)
Q Consensus 202 L~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 256 (265)
||+|+..|+. +++++|++. |++++..+..|.||||+|+..|+.+.++.||+.-
T Consensus 156 L~~A~~~g~~-~~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~G 208 (269)
T 4b93_B 156 LIYACSGGHH-ELVALLLQH-GASINASNNKGNTALHEAVIEKHVFVVELLLLHG 208 (269)
T ss_dssp HHHHHHTTCG-GGHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTT
T ss_pred HHHHHHCCCH-HHHHHHHHC-CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCC
Confidence 9999999998 788888887 8999999999999999999999999999998764
No 31
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=9.9e-34 Score=229.54 Aligned_cols=206 Identities=22% Similarity=0.287 Sum_probs=159.2
Q ss_pred CcCCCCcccHHHHHhcCChHHHHHhhccC----------CCccccCCCCCCcHHHHHHHcCc------------------
Q psy17862 46 NPQDKNKRNILEAAEHNDSKTLEALLDHD----------STLVDAVDKDGYSPLHRACYNDK------------------ 97 (265)
Q Consensus 46 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~----------~~~~~~~d~~g~tpl~~A~~~~~------------------ 97 (265)
..+..+.+++|+|+..|+.+.+..++... ...++..|..|+||||+|+..|+
T Consensus 10 ~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~ 89 (285)
T 3d9h_A 10 HSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIIT 89 (285)
T ss_dssp --------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEEC
T ss_pred ccchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 34556789999999999988887765432 22356788999999999998765
Q ss_pred --CchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhc
Q psy17862 98 --NKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKW 175 (265)
Q Consensus 98 --~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~ 175 (265)
...+++.|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..
T Consensus 90 ~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~ 167 (285)
T 3d9h_A 90 ADHVSPLHEACLGGHLSCVKILLK-HGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARR 167 (285)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH-TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHH
T ss_pred CCCCCHHHHHHHCCcHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHc
Confidence 3579999999999999999998 578899999999999999999999999999999999988644 599999999999
Q ss_pred CCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 176 NNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 176 ~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
++.+++++|++.|++++.++..|.||||+|+..|+. +++++|++. |++++. +..|.||||+|+..|+.+.++.|++.
T Consensus 168 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~ 244 (285)
T 3d9h_A 168 GHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR-ACVKKLLES-GADVNQ-GKGQDSPLHAVVRTASEELACLLMDF 244 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH-HHHHHHHHT-TCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHHC-CCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 999999999999999999999999999999999998 788888887 888885 88999999999999999988888876
Q ss_pred h
Q psy17862 256 C 256 (265)
Q Consensus 256 ~ 256 (265)
-
T Consensus 245 g 245 (285)
T 3d9h_A 245 G 245 (285)
T ss_dssp T
T ss_pred C
Confidence 4
No 32
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=9.1e-34 Score=211.87 Aligned_cols=152 Identities=35% Similarity=0.545 Sum_probs=143.5
Q ss_pred HHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHH
Q psy17862 101 KILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTEC 180 (265)
Q Consensus 101 ~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~ 180 (265)
+|+.|++.|+.++++.|++ .|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++.++
T Consensus 7 ~L~~Aa~~G~~~~v~~Ll~-~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~ 85 (169)
T 4gpm_A 7 RLIEAAENGNKDRVKDLIE-NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEV 85 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHH
Confidence 4555688999999999999 589999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 181 VIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 181 v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
+++|+++|++++.+|..|+||||+|+..|+. +++++|++. |++++.+|..|+|||++|++.|+.++++.|++.
T Consensus 86 v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~-gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ 158 (169)
T 4gpm_A 86 VKLLISKGADVNAKDSDGRTPLHHAAENGHK-EVVKLLISK-GADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQ 158 (169)
T ss_dssp HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred HHHHHHCcCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 9999999999999999999999999999998 788999987 899999999999999999999988888877764
No 33
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=8.6e-35 Score=235.77 Aligned_cols=190 Identities=18% Similarity=0.135 Sum_probs=172.6
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcc
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVD 126 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 126 (265)
.+..+.||||+|+..|+.++|++|++. |++++..+ |.||||+| +..|+.+++++|++ .|.+++
T Consensus 27 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~--g~t~L~~A-------------~~~g~~~~v~~Ll~-~ga~~~ 89 (285)
T 3kea_A 27 ADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLLE--NEFPLHQA-------------ATLEDTKIVKILLF-SGLDDS 89 (285)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCCT--TCCHHHHH-------------TTSSSCHHHHHHHH-TTCCTT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCC--CCCHHHHH-------------HHcCCHHHHHHHHH-CCCCCC
Confidence 345678999999999999999999998 88888874 89999999 67899999999999 588899
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC-ChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHH
Q psy17862 127 AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDG-WTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLA 205 (265)
Q Consensus 127 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g-~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a 205 (265)
..+..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..++.+++++|+++|++.... ..|.||||+|
T Consensus 90 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A 168 (285)
T 3kea_A 90 QFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHIT 168 (285)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHH
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHH
Confidence 999999999999999999999999999999999999999 79999999999999999999999877332 2789999999
Q ss_pred HhCCChHHHHHHHhhCCCCCCcccCCCCccH-HHHHhhcCCchhhhhcchhh
Q psy17862 206 ASHSHSRDVLMILLSHPNVDPHILSTSNESA-REIATRSGIHYGLFETIEPC 256 (265)
Q Consensus 206 ~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~-l~~a~~~~~~~~~~~ll~~~ 256 (265)
+..|+. +++++|+++ |++++.++..|.|| ||+|+..|+.+.+..|++.-
T Consensus 169 ~~~g~~-~~v~~Ll~~-gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~g 218 (285)
T 3kea_A 169 IKNGHV-DMMILLLDY-MTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYD 218 (285)
T ss_dssp HHTTCH-HHHHHHHHH-HHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSC
T ss_pred HHcChH-HHHHHHHHc-CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcC
Confidence 999998 788888887 89999999999998 99999999999888888763
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=9.9e-35 Score=233.92 Aligned_cols=201 Identities=24% Similarity=0.253 Sum_probs=170.0
Q ss_pred CcCCCCcccHHHHHhcCChHHHHHhhcc---CCCccc----cCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHH
Q psy17862 46 NPQDKNKRNILEAAEHNDSKTLEALLDH---DSTLVD----AVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALL 118 (265)
Q Consensus 46 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~---~~~~~~----~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll 118 (265)
..+..+.++||+|+..|+.++|+.|++. .+.+++ ..|..|.||||+|+.+. ..|+.+++++|+
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~----------~~g~~~~v~~Ll 77 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNL----------HNGQNDTIALLL 77 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSC----------BTTBCHHHHHHH
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHH----------hcCChHHHHHHH
Confidence 3455678999999999999999999873 355555 45789999999995421 248899999999
Q ss_pred hcCC----------CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------CCChHHHHHHh
Q psy17862 119 DLDS----------TLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI--------------DGWTPLHSACK 174 (265)
Q Consensus 119 ~~~~----------~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~--------------~g~t~l~~a~~ 174 (265)
+.+. ......+..|.||||+|+..|+.+++++|+++|++++..+. .|.||||+|+.
T Consensus 78 ~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~ 157 (273)
T 2pnn_A 78 DVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC 157 (273)
T ss_dssp HHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHH
T ss_pred HhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHH
Confidence 8531 11222567899999999999999999999999999999886 79999999999
Q ss_pred cCCHHHHHHHHh---cCCCccccCCCCCcHHHHHHhCCCh--------HHHHHHHhhCCCCCCc-------ccCCCCccH
Q psy17862 175 WNNTECVIVLLN---YGVDVNAQTNGGLTPLHLAASHSHS--------RDVLMILLSHPNVDPH-------ILSTSNESA 236 (265)
Q Consensus 175 ~~~~~~v~~Ll~---~g~~~~~~~~~g~tpL~~a~~~~~~--------~~~~~~L~~~~~~~~~-------~~~~~g~t~ 236 (265)
.++.+++++|++ .|++++.+|..|+||||+|+..|+. .+++++|++. |++++ .+|..|.||
T Consensus 158 ~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~n~~~~~~~~~d~~g~Tp 236 (273)
T 2pnn_A 158 TNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILIL-GAKLHPTLKLEEITNRKGLTP 236 (273)
T ss_dssp TTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCH
T ss_pred cCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHh-hhhcccccccccccCCCCCCH
Confidence 999999999999 9999999999999999999998871 3788888887 78876 589999999
Q ss_pred HHHHhhcCCchhhhhcchhhh
Q psy17862 237 REIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 237 l~~a~~~~~~~~~~~ll~~~~ 257 (265)
||+|+..|+.+.++.||+.-.
T Consensus 237 L~~A~~~g~~~iv~~Ll~~ga 257 (273)
T 2pnn_A 237 LALAASSGKIGVLAYILQREI 257 (273)
T ss_dssp HHHHHHTTCHHHHHHHHHHHT
T ss_pred HHHHHHhChHHHHHHHHHCCC
Confidence 999999999999999998765
No 35
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=8.5e-35 Score=232.57 Aligned_cols=199 Identities=23% Similarity=0.236 Sum_probs=170.3
Q ss_pred CCcccHHHHHhcCChHHHHHhhc---cCCCccccCC----CCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLD---HDSTLVDAVD----KDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDS 122 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~---~~~~~~~~~d----~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~ 122 (265)
.+.++||.|+..|+.+.|+.|++ ..+.+++..+ ..|.||||+|+.. +..|+.+++++|+..+.
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~----------~~~g~~~~v~~Ll~~g~ 73 (260)
T 3jxi_A 4 FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLN----------LSAGRNDTIPILLDIAE 73 (260)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTS----------CBTTBCTHHHHHHHHHH
T ss_pred chHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHH----------hhcCCHHHHHHHHHhcc
Confidence 46789999999999997766666 2377787665 7799999999421 15788999999998521
Q ss_pred ----------CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------------CCCChHHHHHHhcCCH
Q psy17862 123 ----------TLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTT--------------IDGWTPLHSACKWNNT 178 (265)
Q Consensus 123 ----------~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~--------------~~g~t~l~~a~~~~~~ 178 (265)
...+..+..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.
T Consensus 74 ~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~ 153 (260)
T 3jxi_A 74 KTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQP 153 (260)
T ss_dssp HTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCH
T ss_pred cccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCH
Confidence 2344456689999999999999999999999999999988 5899999999999999
Q ss_pred HHHHHHHh---cCCCccccCCCCCcHHHHHHhCCCh--------HHHHHHHhhCCCCCC-------cccCCCCccHHHHH
Q psy17862 179 ECVIVLLN---YGVDVNAQTNGGLTPLHLAASHSHS--------RDVLMILLSHPNVDP-------HILSTSNESAREIA 240 (265)
Q Consensus 179 ~~v~~Ll~---~g~~~~~~~~~g~tpL~~a~~~~~~--------~~~~~~L~~~~~~~~-------~~~~~~g~t~l~~a 240 (265)
+++++|++ .|++++.+|..|+||||+|+..++. .+++++|++. |+++ +..|..|.||||+|
T Consensus 154 ~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~-ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 154 HIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIK-CAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp HHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHH-HHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred HHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHh-CcccccccchhhcccCCCCCHHHHH
Confidence 99999999 9999999999999999999987761 2688888887 7887 78999999999999
Q ss_pred hhcCCchhhhhcchhhhhc
Q psy17862 241 TRSGIHYGLFETIEPCFNN 259 (265)
Q Consensus 241 ~~~~~~~~~~~ll~~~~~~ 259 (265)
++.|+.+.++.||++....
T Consensus 233 ~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 233 AKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhCCCc
Confidence 9999999999999885543
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=100.00 E-value=5.3e-34 Score=230.06 Aligned_cols=190 Identities=24% Similarity=0.286 Sum_probs=174.4
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCc--cccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTL--VDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
..++++.|+..|+.+.++.++.. +.+ +|..|..|+||||+| +..|+.+++++|++.+..+++..
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~n~~d~~g~T~Lh~A-------------~~~g~~~~v~~Ll~~g~~~~~~~ 141 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSAR-LLDYVVNIADSNGNTALHYS-------------VSHANFPVVQQLLDSGVCKVDKQ 141 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHH-HHHHHHTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHTSCCCTTCC
T ss_pred hccCCCHHHHHHHHHHHHHHHHH-HHhhcCcCCCCCCCCHHHHH-------------HHCCCHHHHHHHHHCCCCcCCCC
Confidence 35678899999999999999876 444 889999999999999 77899999999999655589999
Q ss_pred CCCCChHHHHHH-----HcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHH
Q psy17862 129 DKDGYSPLHRAC-----YNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLH 203 (265)
Q Consensus 129 ~~~g~t~l~~a~-----~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 203 (265)
+..|.||||+|+ ..++.+++++|++.|...+..+..|.||||+|+..++.+++++|++.|++++.+|..|+||||
T Consensus 142 ~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh 221 (276)
T 4hbd_A 142 NRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALM 221 (276)
T ss_dssp CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 999999999999 568899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 204 LAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 204 ~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
+|+..|+. +++++|++..|++++.+|..|.||||+|+..|+.+.++.|+++
T Consensus 222 ~A~~~g~~-~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 222 CACEHGHK-EIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHHHTCH-HHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHCCCH-HHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 99999998 7889998855999999999999999999999988888888765
No 37
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=7e-33 Score=230.18 Aligned_cols=193 Identities=29% Similarity=0.352 Sum_probs=177.1
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
+.+.++|+.|+..|+.+.|++++...+.+++..|..|.||||+| +..|+.+++++|++ .|.+++..
T Consensus 22 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~ 87 (351)
T 3utm_A 22 EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLA-------------AGYNRVRIVQLLLQ-HGADVHAK 87 (351)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCC
T ss_pred cccchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCcc
Confidence 34678999999999999999999988999999999999999999 67899999999999 58899999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccC-------------
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQT------------- 195 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~------------- 195 (265)
+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++..+
T Consensus 88 ~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~ 167 (351)
T 3utm_A 88 DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP 167 (351)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSH
T ss_pred CCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred -----------------------------------------CCCCcHHHHHHhCCC--hHHHHHHHhhCCCCCCcccCCC
Q psy17862 196 -----------------------------------------NGGLTPLHLAASHSH--SRDVLMILLSHPNVDPHILSTS 232 (265)
Q Consensus 196 -----------------------------------------~~g~tpL~~a~~~~~--~~~~~~~L~~~~~~~~~~~~~~ 232 (265)
..|.||||+|+..++ ..+++++|++. |++++.++..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~ 246 (351)
T 3utm_A 168 ELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKNKD 246 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTT
T ss_pred hhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCC
Confidence 456789999998854 24789999987 8999999999
Q ss_pred CccHHHHHhhcCCchhhhhcchhh
Q psy17862 233 NESAREIATRSGIHYGLFETIEPC 256 (265)
Q Consensus 233 g~t~l~~a~~~~~~~~~~~ll~~~ 256 (265)
|.||||+|++.|+.+.++.|++.-
T Consensus 247 g~t~L~~A~~~g~~~~v~~Ll~~g 270 (351)
T 3utm_A 247 FMTPLHVAAERAHNDVMEVLHKHG 270 (351)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTT
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCC
Confidence 999999999999999999888764
No 38
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2.7e-33 Score=210.25 Aligned_cols=170 Identities=25% Similarity=0.352 Sum_probs=149.3
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCC
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDK 130 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 130 (265)
+.+||+.|+..|+.+.+++|+...+..++..|..|.||||+| +..|+.+++++|++ .+.+++..+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~~~ 67 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWA-------------SAFGEIETVRFLLE-WGADPHILAK 67 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHH-------------HHTTCHHHHHHHHH-HTCCTTCCCT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCchhhcc
Confidence 468999999999999999999996666899999999999999 66899999999998 4788889999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCC
Q psy17862 131 DGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSH 210 (265)
Q Consensus 131 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~ 210 (265)
.|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 68 ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred cCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHhhCCCCCCcccCCCCccH
Q psy17862 211 SRDVLMILLSHPNVDPHILSTSNESA 236 (265)
Q Consensus 211 ~~~~~~~L~~~~~~~~~~~~~~g~t~ 236 (265)
. +++++|+++ +.++...+..|.||
T Consensus 148 ~-~~~~~L~~~-~~~~~~~~~~~~~p 171 (172)
T 3v30_A 148 R-KVQQVIENH-ILKLFQSNLVPADP 171 (172)
T ss_dssp H-HHHHHHHHH-HHHHSCC-------
T ss_pred H-HHHHHHHHH-HHHHhcccCCCCCC
Confidence 7 788888887 78888888888877
No 39
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=2e-33 Score=235.31 Aligned_cols=237 Identities=16% Similarity=0.117 Sum_probs=199.9
Q ss_pred HHHHHHHHHhhcCceeeeeeecccCcccccccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHH
Q psy17862 12 EKMQQLQESIRDGSFNIGQVSAWDDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHR 91 (265)
Q Consensus 12 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~ 91 (265)
+-...|..|+..|++++..... ....+....+..+.||||+|+..|+.++|++|++. +.+++. ..|.||||+
T Consensus 19 ~g~t~L~~Aa~~g~~~~v~~Ll-----~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~--~~g~t~L~~ 90 (364)
T 3ljn_A 19 ENMEKIHVAARKGQTDEVRRLI-----ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASV-GEVHSL--WHGQKPIHL 90 (364)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH-----HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHH-CCCCCC--BTTBCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHH-----HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCccc--cCCCCHHHH
Confidence 3456788888888865433322 11222233445678999999999999999999999 554443 579999999
Q ss_pred HHHcCc-----------------------------------------CchHHHHHHhhC--CHHHHHHHHhcCCCCcccC
Q psy17862 92 ACYNDK-----------------------------------------NKRKILEAAEHN--DSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 92 A~~~~~-----------------------------------------~~~~l~~a~~~~--~~~~~~~ll~~~~~~~~~~ 128 (265)
|+..++ ...+++.|+..| +.+++++|++. |.+++..
T Consensus 91 A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~ 169 (364)
T 3ljn_A 91 AVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAK 169 (364)
T ss_dssp HHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCC
T ss_pred HHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCccc
Confidence 998654 247999999999 99999999995 8899999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHH
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGAD-----TQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLH 203 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 203 (265)
+..|.||||+|+..|+.+++++|+++|++ ++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||
T Consensus 170 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLY 249 (364)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 99999999999999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHhCCChHHHHHHHhhCCCCCCc------------ccCCCCccHHHHHhhcCCchhhhhcchhhhhc
Q psy17862 204 LAASHSHSRDVLMILLSHPNVDPH------------ILSTSNESAREIATRSGIHYGLFETIEPCFNN 259 (265)
Q Consensus 204 ~a~~~~~~~~~~~~L~~~~~~~~~------------~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~ 259 (265)
+|+..|+. +++++|+++ +.+++ ..+..+.||++.|+..|+...+..+|......
T Consensus 250 ~A~~~g~~-~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~~v~~ll~~~~~~ 315 (364)
T 3ljn_A 250 LSVRAAMV-LLTKELLQK-TDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDE 315 (364)
T ss_dssp HHHHTCCH-HHHHHHHHH-SCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhChH-HHHHHHHHc-CCchhhhcCcccCcccccccccccccchhhhhccCHHHHHHHHHHHHHH
Confidence 99999998 788888876 44432 25678899999999999999999998876544
No 40
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-33 Score=234.63 Aligned_cols=205 Identities=17% Similarity=0.206 Sum_probs=179.9
Q ss_pred CcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCC-CCCCcHHHHHHHcCc---------------------------
Q psy17862 46 NPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVD-KDGYSPLHRACYNDK--------------------------- 97 (265)
Q Consensus 46 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d-~~g~tpl~~A~~~~~--------------------------- 97 (265)
.+...+.|+||.|+..+ .+++++|+. .+++..| ..|+||||+|+.+++
T Consensus 89 ~~~~~g~t~L~~Aa~~~-~~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~ 164 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGS-YAITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDC 164 (373)
T ss_dssp -----CCCHHHHHHHSS-SCCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCT
T ss_pred CCCCCCccHHHHHhcCC-chHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCC
Confidence 44566789999999955 477777764 4688888 789999999997654
Q ss_pred -CchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCCCCCCChHHHHHH
Q psy17862 98 -NKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWG---ADTQKTTIDGWTPLHSAC 173 (265)
Q Consensus 98 -~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~---~~~~~~~~~g~t~l~~a~ 173 (265)
...+++.|+..|+.+++++|++ .|.+++..+..|.||||+|+..|+.+++++|++.+ ++++..+..|.||||+|+
T Consensus 165 ~g~TpL~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 165 DENTPLMLAVLARRRRLVAYLMK-AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHH-TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcChHHHHHHHHH-CCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHH
Confidence 2469999999999999999999 58889999999999999999999999999999988 799999999999999999
Q ss_pred hcC---CHHHHHHHHhcCCCccc--------cCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhh
Q psy17862 174 KWN---NTECVIVLLNYGVDVNA--------QTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATR 242 (265)
Q Consensus 174 ~~~---~~~~v~~Ll~~g~~~~~--------~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~ 242 (265)
..+ +.+++++|++.|++++. .+..|.||||+|+..|+. +++++|++..+++++.+|..|.||||+|+.
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~ 322 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNM-PIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ 322 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCH-HHHHHHHHHSCCCTTCCCTTCCCHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCH-HHHHHHHHhcCCCccCcCCCCCCHHHHHHH
Confidence 998 89999999999999886 577899999999999998 788888877679999999999999999999
Q ss_pred cCCchhhhhcchhh
Q psy17862 243 SGIHYGLFETIEPC 256 (265)
Q Consensus 243 ~~~~~~~~~ll~~~ 256 (265)
.|+.+.++.|++.-
T Consensus 323 ~g~~~iv~~Ll~~g 336 (373)
T 2fo1_E 323 EGRIEVVMYLIQQG 336 (373)
T ss_dssp HTCHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHcC
Confidence 99999999988864
No 41
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.7e-32 Score=214.20 Aligned_cols=179 Identities=25% Similarity=0.306 Sum_probs=163.5
Q ss_pred CChHHHHHhhccCCCccccC-CCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHH
Q psy17862 62 NDSKTLEALLDHDSTLVDAV-DKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRAC 140 (265)
Q Consensus 62 g~~~~v~~ll~~~~~~~~~~-d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~ 140 (265)
|+.+++++|++. +.+++.. |..|.||||+| +..|+.+++++|++ .+.+++..+..|.||||+|+
T Consensus 2 g~~~~i~~Ll~~-g~~~~~~~d~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~ 66 (223)
T 2f8y_A 2 DAPAVISDFIYQ-GASLHNQTDRTGETALHLA-------------ARYSRSDAAKRLLE-ASADANIQDNMGRTPLHAAV 66 (223)
T ss_dssp ---CCEETTEET-TCCTTCCCTTTCCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHH
T ss_pred CcHHHHHHHHHc-CCCcccccCCCCCchHHHH-------------HHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHH
Confidence 678889999998 6676654 88999999999 77899999999998 57889999999999999999
Q ss_pred HcCCHHHHHHHHHcCC-CCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHh
Q psy17862 141 YNGHANIVELLIQWGA-DTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILL 219 (265)
Q Consensus 141 ~~~~~~~~~~Ll~~~~-~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~ 219 (265)
..|+.+++++|++.+. +++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+. +++++|+
T Consensus 67 ~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll 145 (223)
T 2f8y_A 67 SADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV-DAAVVLL 145 (223)
T ss_dssp HTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHH
T ss_pred HcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCH-HHHHHHH
Confidence 9999999999999987 8899999999999999999999999999999999999999999999999999998 7888898
Q ss_pred hCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 220 SHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 220 ~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
++ |++++..|..|.||||+|+..|+.+.++.|++...
T Consensus 146 ~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 182 (223)
T 2f8y_A 146 KN-GANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 182 (223)
T ss_dssp HT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred Hc-CCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence 88 89999999999999999999999999998887643
No 42
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=1.9e-32 Score=209.27 Aligned_cols=163 Identities=23% Similarity=0.238 Sum_probs=153.4
Q ss_pred ccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCC
Q psy17862 77 LVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGA 156 (265)
Q Consensus 77 ~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 156 (265)
.++.+|..|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 27 ~~n~~d~~g~t~L~~A-------------~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 92 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVA-------------CMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGS 92 (192)
T ss_dssp HHTCCCTTCCCHHHHH-------------HHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHhCcCCCCCCHHHHH-------------HHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCC
Confidence 4678899999999999 678999999999995 67888899999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccH
Q psy17862 157 DTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESA 236 (265)
Q Consensus 157 ~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~ 236 (265)
+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+. +++++|+++ |++++.+|..|.||
T Consensus 93 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~ 170 (192)
T 2rfm_A 93 NVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRS-EIVKKLLEL-GADISARDLTGLTA 170 (192)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCH-HHHHHHHHT-TCCTTCBCTTSCBH
T ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHC-CCCCCCcCCCCCCH
Confidence 9999999999999999999999999999999999999999999999999999998 788899888 89999999999999
Q ss_pred HHHHhhcCCchhhhhcchh
Q psy17862 237 REIATRSGIHYGLFETIEP 255 (265)
Q Consensus 237 l~~a~~~~~~~~~~~ll~~ 255 (265)
+++|+..|+.+.+..|++.
T Consensus 171 l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 171 EASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhCcHHHHHHHHhc
Confidence 9999999988888887765
No 43
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=8.3e-32 Score=223.18 Aligned_cols=202 Identities=23% Similarity=0.313 Sum_probs=171.5
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCCC-CCCcHHHHHHHcCc--------------------CchHHHHHHhhC
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVDK-DGYSPLHRACYNDK--------------------NKRKILEAAEHN 109 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~-~g~tpl~~A~~~~~--------------------~~~~l~~a~~~~ 109 (265)
+.|+|+.|++.|+.++|++||+. |+++|.++. .|+||||+|+..|+ ...+++.++..+
T Consensus 25 ~~t~L~~Av~~g~~~~V~~LL~~-Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~ 103 (337)
T 4g8k_A 25 DNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAG 103 (337)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHT
T ss_pred CChHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcc
Confidence 56899999999999999999998 899998875 59999999976544 123555555566
Q ss_pred CHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC----------CCCCChHHHHHHhcCCHH
Q psy17862 110 DSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT----------TIDGWTPLHSACKWNNTE 179 (265)
Q Consensus 110 ~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~----------~~~g~t~l~~a~~~~~~~ 179 (265)
....+..++. .+.+++..+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+
T Consensus 104 ~~~~~~~~~~-~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~ 182 (337)
T 4g8k_A 104 SVKLLKLFLS-KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVE 182 (337)
T ss_dssp CHHHHHHHHT-TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHH
T ss_pred cchhhHHhhh-ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHH
Confidence 6666665555 45677788899999999999999999999999999887643 446899999999999999
Q ss_pred HHHHHHh-cCCCccccCCCCCcHHHHHHhCC---ChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 180 CVIVLLN-YGVDVNAQTNGGLTPLHLAASHS---HSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 180 ~v~~Ll~-~g~~~~~~~~~g~tpL~~a~~~~---~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
++++|+. .|++++.++..|.||+++++..+ ..+.++++|+++ |++++.++..|.||||+|+..|+.+.+..|+..
T Consensus 183 ~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~ 261 (337)
T 4g8k_A 183 VLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQ 261 (337)
T ss_dssp HHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTS
T ss_pred HHHHHHhccCCCcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHh
Confidence 9999995 59999999999999999877643 445788999987 899999999999999999999999999888875
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=1.4e-32 Score=216.67 Aligned_cols=210 Identities=24% Similarity=0.272 Sum_probs=173.0
Q ss_pred HHHHHhhcCceeeeeeecccCccccc-ccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHH
Q psy17862 16 QLQESIRDGSFNIGQVSAWDDDVVGI-EDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACY 94 (265)
Q Consensus 16 ~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~ 94 (265)
.|..|+..|+.+..... ....... ......+..+.||||+|+..|+.++|++|++. |++++..|..|.||||+|
T Consensus 11 ~L~~A~~~g~~~~v~~L--l~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-- 85 (236)
T 1ikn_D 11 FLHLAIIHEEKALTMEV--IRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA-GCDPELRDFRGNTPLHLA-- 85 (236)
T ss_dssp TTHHHHHTTCSSSSSCC--CC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC-CCCSCCCCTTCCCHHHHH--
T ss_pred hhHHHHHcCChhHHHHH--HHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHH--
Confidence 35667777775432222 1111111 11223344578999999999999999999998 899999999999999999
Q ss_pred cCcCchHHHHHHhhCCHHHHHHHHhcCC-----CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC-CCChH
Q psy17862 95 NDKNKRKILEAAEHNDSKTLEALLDLDS-----TLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI-DGWTP 168 (265)
Q Consensus 95 ~~~~~~~l~~a~~~~~~~~~~~ll~~~~-----~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~g~t~ 168 (265)
+..|+.+++++|+..+. ...+..+..|.||||+|+..|+.+++++|+++|++++..+. .|.||
T Consensus 86 -----------~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tp 154 (236)
T 1ikn_D 86 -----------CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTA 154 (236)
T ss_dssp -----------HHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred -----------HHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCH
Confidence 67899999999998542 22567788999999999999999999999999999999997 99999
Q ss_pred HHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCc--ccCCCCccHHHHHhhc
Q psy17862 169 LHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPH--ILSTSNESAREIATRS 243 (265)
Q Consensus 169 l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~--~~~~~g~t~l~~a~~~ 243 (265)
||+|+..++.+++++|+++|++++.++..|.|||++|+..|+. +++++|+++ |+++. ..+..|.||.+.+...
T Consensus 155 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~-~~~~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~ 229 (236)
T 1ikn_D 155 LHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPST-RIQQQLGQL-TLENLQMLPESEDEESYDTESEF 229 (236)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCH-HHHHHHHTT-SCGGGSSCCCCCTTTCCCCC---
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCch-HHHHHHHHc-chhhhhcCCccchHHHHhhhccc
Confidence 9999999999999999999999999999999999999999998 789999987 78766 7889999998776544
No 45
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-35 Score=229.02 Aligned_cols=198 Identities=17% Similarity=0.154 Sum_probs=174.6
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcc
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVD 126 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 126 (265)
....+.++|++|+..|+.++|++|++. |.+++..|..|.||||+| +..|+.+++++|++ .|.+++
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A-------------~~~g~~~~v~~Ll~-~ga~~n 81 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNA-------------ICGANYSIVDFLIT-AGANVN 81 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTT
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHH-------------HHcCCHHHHHHHHH-CCCCCC
Confidence 334556889999999999999999998 889999999999999999 67899999999998 588999
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHH--HhcCCHHHHHHHHhcCCCccccCCCCCcHHH
Q psy17862 127 AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTT-IDGWTPLHSA--CKWNNTECVIVLLNYGVDVNAQTNGGLTPLH 203 (265)
Q Consensus 127 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~a--~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~ 203 (265)
..|..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+| +..++.+++++|++.|++++.++..|.||++
T Consensus 82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW 161 (229)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence 999999999999999999999999999999999986 6999999999 9999999999999999999999999999998
Q ss_pred HHHhCCChHHHHHHHhhCCCCC--CcccCCCCccHHHHHhhcCCchhhhhcchhhhhccCCCC
Q psy17862 204 LAASHSHSRDVLMILLSHPNVD--PHILSTSNESAREIATRSGIHYGLFETIEPCFNNLSMGP 264 (265)
Q Consensus 204 ~a~~~~~~~~~~~~L~~~~~~~--~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 264 (265)
.++..+. .++|+.. |.+ ++.+|..|.||||+|++.|+.+.|+..+...++.+..++
T Consensus 162 ~~~~~~~----~~~ll~~-ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l~~~p~~~~~~ 219 (229)
T 2vge_A 162 DYSAEFG----DELSFRE-GESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQR 219 (229)
T ss_dssp CBCCSST----TBCCBCT-TCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGEESSCCCC---
T ss_pred HHhhccc----cccCccc-cccccccccCCCcccHHHHHHHcCCcceeehhhhhhCCCCCCch
Confidence 6655433 2455555 676 677899999999999999999999998888888776543
No 46
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=100.00 E-value=1.7e-31 Score=199.34 Aligned_cols=162 Identities=27% Similarity=0.360 Sum_probs=150.8
Q ss_pred CCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy17862 84 DGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI 163 (265)
Q Consensus 84 ~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 163 (265)
.|.||||+| +..|+.+++++|++. +..++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus 2 ~~~t~L~~A-------------~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~ 67 (167)
T 3v31_A 2 ANSLSVHQL-------------AAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGK 67 (167)
T ss_dssp TTCCCHHHH-------------HHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCcchHHHH-------------HHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCC
Confidence 578999999 778999999999995 678899999999999999999999999999999999999999
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhc
Q psy17862 164 DGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRS 243 (265)
Q Consensus 164 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~ 243 (265)
.|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+. +++++|++. |++++.+|..|.||+++|+..
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 68 GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHV-KCVKMLLES-GADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHc
Confidence 999999999999999999999999999999999999999999999998 788888887 899999999999999999999
Q ss_pred CCchhhhhcchhhhhccC
Q psy17862 244 GIHYGLFETIEPCFNNLS 261 (265)
Q Consensus 244 ~~~~~~~~ll~~~~~~~~ 261 (265)
|+.+.+..|++.....+.
T Consensus 146 ~~~~~~~~L~~~~~~~~~ 163 (167)
T 3v31_A 146 GYRSVQQVIESHLLKLLQ 163 (167)
T ss_dssp TCHHHHHHHHHHHHHHCS
T ss_pred CcHHHHHHHHHHHHHHHH
Confidence 998888888887665443
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.98 E-value=2.7e-31 Score=204.11 Aligned_cols=187 Identities=20% Similarity=0.234 Sum_probs=162.8
Q ss_pred HHHHHHhhcCceeeeeeecccCcccccc-cCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHH
Q psy17862 15 QQLQESIRDGSFNIGQVSAWDDDVVGIE-DSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRAC 93 (265)
Q Consensus 15 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~ 93 (265)
..|..|+..|+....... +.... +....+..+.||||+|+..|+.+++++|++. |++++..+..|.||||+|
T Consensus 7 ~~L~~A~~~g~~~~v~~l-----l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A- 79 (201)
T 3hra_A 7 GALLEAANQRDTKKVKEI-----LQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYA- 79 (201)
T ss_dssp THHHHHHHTTCHHHHHHH-----HTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-
T ss_pred cHHHHHHHhccHHHHHHH-----HHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHH-
Confidence 456677777765332222 11111 2223345678999999999999999999998 899999999999999999
Q ss_pred HcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHH
Q psy17862 94 YNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWG-ADTQKTTIDGWTPLHSA 172 (265)
Q Consensus 94 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a 172 (265)
+..++.+++++|+...+.+++..+..|.||||+|+..|+.+++++|+++| ++++..+..|.||||+|
T Consensus 80 ------------~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A 147 (201)
T 3hra_A 80 ------------GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147 (201)
T ss_dssp ------------HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHH
T ss_pred ------------HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHH
Confidence 67899999999997788899999999999999999999999999999999 99999999999999999
Q ss_pred HhcCC-----HHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhC
Q psy17862 173 CKWNN-----TECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSH 221 (265)
Q Consensus 173 ~~~~~-----~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~ 221 (265)
+..+. .+++++|+++|++++.+|..|.||||+|+..|+. +++++|+++
T Consensus 148 ~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~-~~~~~Ll~~ 200 (201)
T 3hra_A 148 VGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYT-EISKILAQY 200 (201)
T ss_dssp HHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH-HHHHHHHTC
T ss_pred HHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCH-hHHHHHHhc
Confidence 99998 9999999999999999999999999999999998 788888875
No 48
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.98 E-value=1.2e-31 Score=199.07 Aligned_cols=158 Identities=22% Similarity=0.291 Sum_probs=141.8
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD 129 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 129 (265)
...++|+.|+..|+.+++++|++. +.+++..|..|.||||+| +. ++.+++++|++ .+.+++..+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A-------------~~-~~~~~v~~Ll~-~g~~~~~~~ 67 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVM-------------KL-GNPEIARRLLL-RGANPDLKD 67 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHC-------------CS-SCHHHHHHHHH-TTCCTTCCC
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHH-------------Hc-CcHHHHHHHHH-cCCCCCCCC
Confidence 456899999999999999999987 788999999999999998 66 88999999998 578888899
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCC-ccccCCCCCcHHHHHHhC
Q psy17862 130 KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVD-VNAQTNGGLTPLHLAASH 208 (265)
Q Consensus 130 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~-~~~~~~~g~tpL~~a~~~ 208 (265)
..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++ ++.++..|.||||+|+..
T Consensus 68 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~ 147 (162)
T 1ihb_A 68 RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY 147 (162)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHc
Confidence 9999999999999999999999999999999999999999999999999999999999987 588999999999999999
Q ss_pred CChHHHHHHHhhCCCCC
Q psy17862 209 SHSRDVLMILLSHPNVD 225 (265)
Q Consensus 209 ~~~~~~~~~L~~~~~~~ 225 (265)
|+. +++++|+++ |+|
T Consensus 148 ~~~-~~~~~Ll~~-GAd 162 (162)
T 1ihb_A 148 GRN-EVVSLMQAN-GAG 162 (162)
T ss_dssp TCH-HHHHHHHHT-C--
T ss_pred CCH-HHHHHHHHh-CCC
Confidence 987 788888887 553
No 49
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.98 E-value=4.1e-31 Score=208.20 Aligned_cols=179 Identities=28% Similarity=0.384 Sum_probs=165.8
Q ss_pred CccccCCCCCCcHHHHHHHcCc--------------------CchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChH
Q psy17862 76 TLVDAVDKDGYSPLHRACYNDK--------------------NKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSP 135 (265)
Q Consensus 76 ~~~~~~d~~g~tpl~~A~~~~~--------------------~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~ 135 (265)
.+++..|..|.||||+|+..|+ ...+++.|+..|+.+++++|++ .|..++..+..|.||
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~ 80 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIK-AGALVDPKDAEGSTC 80 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHT-TTCCCCCCCTTSCCH
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHh-CCCCCCCCCCCCCcH
Confidence 3677889999999999998765 3469999999999999999998 578888899999999
Q ss_pred HHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHH
Q psy17862 136 LHRACYNGHANIVELLIQWG-ADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDV 214 (265)
Q Consensus 136 l~~a~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~ 214 (265)
||+|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..|+. ++
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~ 159 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCV-DI 159 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCH-HH
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCH-HH
Confidence 99999999999999999998 88999999999999999999999999999999999999999999999999999998 78
Q ss_pred HHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 215 LMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 215 ~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
+++|++. |++++.+|..|.||||+|++.|+.+.++.|++...
T Consensus 160 ~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 201 (237)
T 3b7b_A 160 AEILLAA-KCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDS 201 (237)
T ss_dssp HHHHHTT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC
T ss_pred HHHHHHc-CCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCC
Confidence 8999887 89999999999999999999999999988887643
No 50
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.98 E-value=2.9e-31 Score=198.61 Aligned_cols=157 Identities=36% Similarity=0.522 Sum_probs=135.4
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
..+.++|++|+..|+.++|++|++. +.+++..|..|.||||+| +..|+.+++++|++ .+.+++..
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~ 76 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMAN-GADVNAEDASGWTPLHLA-------------AFNGHLEIVEVLLK-NGADVNAV 76 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCC
T ss_pred CcccchHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCcc
Confidence 3456788899999999999999987 788888888899999998 66788899998888 47788888
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhC
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASH 208 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~ 208 (265)
+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..
T Consensus 77 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 77 DHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDN 156 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHh
Confidence 88889999999999999999999999988888888899999999999999999999999999888888899999999988
Q ss_pred CChHHHHHHHhhC
Q psy17862 209 SHSRDVLMILLSH 221 (265)
Q Consensus 209 ~~~~~~~~~L~~~ 221 (265)
|+. +++++|++.
T Consensus 157 ~~~-~~~~~L~~~ 168 (169)
T 2y1l_E 157 GNE-DLAEILQKL 168 (169)
T ss_dssp TCH-HHHHHHHTC
T ss_pred CCH-HHHHHHHHc
Confidence 887 677888764
No 51
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=2.7e-31 Score=198.34 Aligned_cols=156 Identities=28% Similarity=0.436 Sum_probs=147.9
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD 129 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 129 (265)
.+.||||.|+..|+.+++++|++. +.+++..|..|.||||+| +..|+.+++++|++. +.+++..+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~~-g~~~~~~~ 66 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWA-------------AAHGQIAVVEFLLQN-GADPQLLG 66 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHT-TCCTTCCC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHH-------------HHCCCHHHHHHHHHc-CCCCCCcC
Confidence 367999999999999999999998 788999999999999999 678999999999994 88899999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCC
Q psy17862 130 KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHS 209 (265)
Q Consensus 130 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~ 209 (265)
..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..|
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 67 KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHhhC
Q psy17862 210 HSRDVLMILLSH 221 (265)
Q Consensus 210 ~~~~~~~~L~~~ 221 (265)
+. +++++|+++
T Consensus 147 ~~-~~~~~L~~~ 157 (167)
T 3v31_A 147 YR-SVQQVIESH 157 (167)
T ss_dssp CH-HHHHHHHHH
T ss_pred cH-HHHHHHHHH
Confidence 98 788888775
No 52
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.98 E-value=1.6e-32 Score=226.62 Aligned_cols=174 Identities=18% Similarity=0.160 Sum_probs=142.4
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCC---HHHHHHHHhcCCC
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHND---SKTLEALLDLDST 123 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~---~~~~~~ll~~~~~ 123 (265)
.+..+.||||+|+..|+.++|++|++. |++++.+|..|+||||+| +..|+ .+.++.|+.....
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A-------------~~~g~~~~~~~~~~ll~~~~~ 192 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKH-GSNRLYGDNMGESCLVKA-------------VKSVNNYDSGTFEALLDYLYP 192 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTBCCTTCCCHHHHH-------------HHSSHHHHTTCHHHHHHHHGG
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHH-------------HHhcccccHHHHHHHHHhhhc
Confidence 355688999999999999999999998 899999999999999999 44555 5667777765556
Q ss_pred CcccCCCCCChHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCCCCCChHHHHHHhcCCHH
Q psy17862 124 LVDAVDKDGYSPLHRACY----NGHANIVELLIQW--------------------GADTQKTTIDGWTPLHSACKWNNTE 179 (265)
Q Consensus 124 ~~~~~~~~g~t~l~~a~~----~~~~~~~~~Ll~~--------------------~~~~~~~~~~g~t~l~~a~~~~~~~ 179 (265)
.++..+..|.||||+|+. .|+.+++++|++. |++++..+..|.||||.|+.
T Consensus 193 ~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~----- 267 (327)
T 1sw6_A 193 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD----- 267 (327)
T ss_dssp GGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS-----
T ss_pred cccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH-----
Confidence 788899999999999999 8999999999987 88999999999999999985
Q ss_pred HHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcC
Q psy17862 180 CVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSG 244 (265)
Q Consensus 180 ~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~ 244 (265)
+++|++. +++.+|..|+||||+|+..|+. +++++|+++ |++++.+|..|+||||+|++.|
T Consensus 268 -~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~-~~v~~Ll~~-Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 -LKWIIAN--MLNAQDSNGDTCLNIAARLGNI-SIVDALLDY-GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp -HHHHHHH--TTTCCCTTSCCHHHHHHHHCCH-HHHHHHHHT-TCCTTCCCTTSCCGGGGTCC--
T ss_pred -HHHHHHh--CCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCcccCCCCCCHHHHHHhcC
Confidence 8889888 5888999999999999999998 789999988 9999999999999999998765
No 53
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.98 E-value=1.2e-31 Score=202.58 Aligned_cols=168 Identities=23% Similarity=0.350 Sum_probs=154.1
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD 129 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 129 (265)
...++|+.|+..|+.+.|++|++..+.+++..|..|.||||+| +..++.+++++|++ .+.+++..+
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~~ 69 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWA-------------CREGRSAVVEMLIM-RGARINVMN 69 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHH-------------HHcCcHHHHHHHHH-cCCCCCCcC
Confidence 4678999999999999999999998889999999999999999 67899999999998 588899999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCC
Q psy17862 130 KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHS 209 (265)
Q Consensus 130 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~ 209 (265)
..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..+
T Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~ 149 (179)
T 3f6q_A 70 RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPL 149 (179)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ChHHHHHHHhhCCCCCCcccCCCC
Q psy17862 210 HSRDVLMILLSHPNVDPHILSTSN 233 (265)
Q Consensus 210 ~~~~~~~~L~~~~~~~~~~~~~~g 233 (265)
+. .++++|++. |.+++..+.++
T Consensus 150 ~~-~~~~~L~~~-g~~~~~~~~~~ 171 (179)
T 3f6q_A 150 RE-LLRERAEKM-GQNLNRIPYKD 171 (179)
T ss_dssp HH-HHHHHHHHT-TCCCSCBCCCC
T ss_pred HH-HHHHHHHHh-hcCcccCCccc
Confidence 76 788999887 88888766554
No 54
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.98 E-value=7.3e-32 Score=211.70 Aligned_cols=159 Identities=27% Similarity=0.358 Sum_probs=148.6
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcc
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVD 126 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 126 (265)
.+..+.||||+|+..|+.+++++|++. +.+++..|..|.||||+| +..++.+++++|++ .+.+++
T Consensus 69 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~~~~~~~~~~~Ll~-~g~~~~ 133 (231)
T 3aji_A 69 KDDAGWSPLHIAASAGXDEIVKALLVK-GAHVNAVNQNGCTPLHYA-------------ASKNRHEIAVMLLE-GGANPD 133 (231)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTT
T ss_pred cCCCCCCHHHHHHHcCHHHHHHHHHHc-CCCCCCCCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCC
Confidence 345678999999999999999999998 889999999999999999 67899999999998 578889
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy17862 127 AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAA 206 (265)
Q Consensus 127 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~ 206 (265)
..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 134 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 134 AKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK 213 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSC
T ss_pred CcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hCCChHHHHHHHhhC
Q psy17862 207 SHSHSRDVLMILLSH 221 (265)
Q Consensus 207 ~~~~~~~~~~~L~~~ 221 (265)
..++. .++++|.++
T Consensus 214 ~~~~~-~i~~lL~~~ 227 (231)
T 3aji_A 214 GGLGL-ILKRLAEGE 227 (231)
T ss_dssp HHHHH-HHHHHHHHH
T ss_pred hhHHH-HHHHHHccc
Confidence 87665 788888765
No 55
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.98 E-value=6.2e-31 Score=207.55 Aligned_cols=177 Identities=24% Similarity=0.310 Sum_probs=160.1
Q ss_pred cccCCCCCCcHHHHHHHcCc------------------------CchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCC
Q psy17862 78 VDAVDKDGYSPLHRACYNDK------------------------NKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGY 133 (265)
Q Consensus 78 ~~~~d~~g~tpl~~A~~~~~------------------------~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~ 133 (265)
++.+|.+|.||||+|+..|+ ...+++.|+..|+.+++++|++ .|.+++..+..|.
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~ 80 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVT-AGASPMALDRHGQ 80 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSC
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCC
Confidence 35678999999999998765 3479999999999999999999 5788899999999
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCC----CCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccC-CCCCcHHHHHHhC
Q psy17862 134 SPLHRACYNGHANIVELLIQWGA----DTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQT-NGGLTPLHLAASH 208 (265)
Q Consensus 134 t~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpL~~a~~~ 208 (265)
||||+|+..++.+++++|++.++ +++..+..|.||||+|+..++.+++++|++.|++++..+ ..|.||||+|+..
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~ 160 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVEN 160 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHT
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHc
Confidence 99999999999999999999987 788889999999999999999999999999999999988 7899999999999
Q ss_pred CChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 209 SHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 209 ~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
|+. +++++|++. |++++..|..|.||||+|+..|+.+.++.|++.-.
T Consensus 161 ~~~-~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 207 (241)
T 1k1a_A 161 NSL-SMVQLLLQH-GANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA 207 (241)
T ss_dssp TCH-HHHHHHHHT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred CCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 998 788999887 89999999999999999999999999999887643
No 56
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.98 E-value=3.7e-31 Score=202.08 Aligned_cols=158 Identities=25% Similarity=0.347 Sum_probs=149.1
Q ss_pred CCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCccc
Q psy17862 48 QDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDA 127 (265)
Q Consensus 48 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 127 (265)
+..+.||||+|+..|+.+++++|++. +.+++..|..|.||||+| +..++.+++++|+.. +.+++.
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~~-g~~~~~ 96 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWA-------------VKNNRLGIAEKLLSK-GSNVNT 96 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHH-TCCTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHH-------------HHcCCHHHHHHHHHC-CCCCCC
Confidence 45678999999999999999999998 889999999999999999 678999999999994 788999
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHh
Q psy17862 128 VDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAAS 207 (265)
Q Consensus 128 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~ 207 (265)
.+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 176 (192)
T 2rfm_A 97 KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARI 176 (192)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHhhC
Q psy17862 208 HSHSRDVLMILLSH 221 (265)
Q Consensus 208 ~~~~~~~~~~L~~~ 221 (265)
.|+. +++++|++.
T Consensus 177 ~~~~-~~v~~Ll~~ 189 (192)
T 2rfm_A 177 FGRQ-EVIKIFTEV 189 (192)
T ss_dssp TTCH-HHHHHHHHH
T ss_pred hCcH-HHHHHHHhc
Confidence 9998 788888764
No 57
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.98 E-value=5.5e-31 Score=197.59 Aligned_cols=160 Identities=24% Similarity=0.291 Sum_probs=147.8
Q ss_pred CCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q psy17862 85 GYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTID 164 (265)
Q Consensus 85 g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 164 (265)
+.||||.| +..|+.+.++.|+..++..++..+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus 2 ~~~~L~~A-------------~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~ 68 (172)
T 3v30_A 2 DSLSIHQL-------------AAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE 68 (172)
T ss_dssp --CCHHHH-------------HHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT
T ss_pred chhhHHHH-------------HHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc
Confidence 45788888 77999999999999776668889999999999999999999999999999999999999
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcC
Q psy17862 165 GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSG 244 (265)
Q Consensus 165 g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~ 244 (265)
|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+. +++++|++. |++++.+|..|.||||+|+..|
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~ 146 (172)
T 3v30_A 69 RESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHV-KCVEALLAR-GADLTTEADSGYTPMDLAVALG 146 (172)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHT
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCccccCCCCCCHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999998 788899887 8999999999999999999999
Q ss_pred Cchhhhhcchhhhhc
Q psy17862 245 IHYGLFETIEPCFNN 259 (265)
Q Consensus 245 ~~~~~~~ll~~~~~~ 259 (265)
+.+.++.|++...+.
T Consensus 147 ~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 147 YRKVQQVIENHILKL 161 (172)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH
Confidence 888888888775543
No 58
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=7.1e-32 Score=218.60 Aligned_cols=183 Identities=17% Similarity=0.136 Sum_probs=167.2
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCC
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDK 130 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 130 (265)
+.||||+|+..|+.+++++|++. |++++..|..|.||||+| +..|+.+++++|++. |.+++..+.
T Consensus 62 g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A-------------~~~g~~~~v~~Ll~~-ga~~~~~~~ 126 (285)
T 3kea_A 62 NEFPLHQAATLEDTKIVKILLFS-GLDDSQFDDKGNTALYYA-------------VDSGNMQTVKLFVKK-NWRLMFYGK 126 (285)
T ss_dssp TCCHHHHHTTSSSCHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHH-CGGGGGCSS
T ss_pred CCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCcHHHHH-------------HHcCCHHHHHHHHhc-CCCCCccCC
Confidence 78999999999999999999998 899999999999999999 678999999999995 889999999
Q ss_pred CC-ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcH-HHHHHhC
Q psy17862 131 DG-YSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTP-LHLAASH 208 (265)
Q Consensus 131 ~g-~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tp-L~~a~~~ 208 (265)
.| .||||+|+..|+.+++++|+++|++.... ..|.||||+|+..++.+++++|+++|++++.++..|+|| ||+|+..
T Consensus 127 ~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~ 205 (285)
T 3kea_A 127 TGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDN 205 (285)
T ss_dssp SGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHc
Confidence 99 89999999999999999999999876332 289999999999999999999999999999999999998 9999999
Q ss_pred CChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhhh
Q psy17862 209 SHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCFN 258 (265)
Q Consensus 209 ~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~~ 258 (265)
|+. +++++|+++ |++++..+. .|+..|+.+.++.|++.-.+
T Consensus 206 ~~~-~~v~~Ll~~-gad~~~~~~-------~a~~~~~~~iv~~Ll~~g~~ 246 (285)
T 3kea_A 206 KDI-EMLQALFKY-DINIYSANL-------ENVLLDDAEIAKMIIEKHVE 246 (285)
T ss_dssp TCH-HHHHHHTTS-CBCSTTTTG-------GGGTTTCHHHHHHHHHHHHH
T ss_pred CCH-HHHHHHHHc-CCCCCCCCh-------hhhhcCCHHHHHHHHHcCCC
Confidence 997 899999998 899999883 56778888888888887544
No 59
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.2e-30 Score=195.21 Aligned_cols=157 Identities=34% Similarity=0.447 Sum_probs=145.4
Q ss_pred CCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy17862 82 DKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT 161 (265)
Q Consensus 82 d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 161 (265)
...+.+||++| +..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 11 ~~~~~~~l~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 76 (169)
T 2y1l_E 11 GSDLGKKLLEA-------------ARAGRDDEVRILMA-NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAV 76 (169)
T ss_dssp --CHHHHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCcccchHHHH-------------HHcCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Confidence 34566778887 78999999999999 57889999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHh
Q psy17862 162 TIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIAT 241 (265)
Q Consensus 162 ~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~ 241 (265)
+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+++|+
T Consensus 77 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 77 DHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHL-EIVEVLLKN-GADVNAQDKFGKTAFDISI 154 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999998 789999988 8999999999999999999
Q ss_pred hcCCchhhhhcch
Q psy17862 242 RSGIHYGLFETIE 254 (265)
Q Consensus 242 ~~~~~~~~~~ll~ 254 (265)
..|+.+.++.|++
T Consensus 155 ~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 155 DNGNEDLAEILQK 167 (169)
T ss_dssp HTTCHHHHHHHHT
T ss_pred HhCCHHHHHHHHH
Confidence 9998888877765
No 60
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.7e-30 Score=191.23 Aligned_cols=150 Identities=35% Similarity=0.455 Sum_probs=100.8
Q ss_pred cccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCC
Q psy17862 52 KRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKD 131 (265)
Q Consensus 52 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~ 131 (265)
+++|+.|+..|+.++|++|++. +.+++ .+..|.||||+| +..|+.+++++|++ .+.+++..+..
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~~~~ 66 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLA-------------AQYGHFSTTEVLLR-AGVSRDARTKV 66 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHH-------------HHHTCHHHHHHHHT-TTCCTTCCCTT
T ss_pred cHHHHHHHHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCCCCCC
Confidence 4566777777777777777766 44444 356667777777 45666677777666 45566666666
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCCh
Q psy17862 132 GYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHS 211 (265)
Q Consensus 132 g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~ 211 (265)
|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..|+.
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred CCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCH
Confidence 77777777777777777777777777666666677777777777777777777777777766666677777777776665
Q ss_pred HHHHHHH
Q psy17862 212 RDVLMIL 218 (265)
Q Consensus 212 ~~~~~~L 218 (265)
+++++|
T Consensus 147 -~i~~~L 152 (153)
T 1awc_B 147 -DLAEIL 152 (153)
T ss_dssp -HHHHHH
T ss_pred -HHHHHh
Confidence 455554
No 61
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=5.6e-31 Score=196.20 Aligned_cols=157 Identities=33% Similarity=0.467 Sum_probs=123.1
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
+.+.++|+.|+..|+.+.+++|++..+.+++..+..|.||||+| +..++.+++++|++ .+.+++..
T Consensus 6 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~ 71 (165)
T 3twr_A 6 SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFA-------------AGYNRVSVVEYLLQ-HGADVHAK 71 (165)
T ss_dssp CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCC
T ss_pred chhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHH-------------HHcChHHHHHHHHh-cCCCCCcc
Confidence 34567788888888888888888776777777777788888888 55777888888887 46777777
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhC
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASH 208 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~ 208 (265)
+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~- 150 (165)
T 3twr_A 72 DKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD- 150 (165)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-
Confidence 7788888888888888888888888888888888888888888888888888888888888888888888888888665
Q ss_pred CChHHHHHHHhhC
Q psy17862 209 SHSRDVLMILLSH 221 (265)
Q Consensus 209 ~~~~~~~~~L~~~ 221 (265)
++. +++++|++.
T Consensus 151 ~~~-~i~~~L~~~ 162 (165)
T 3twr_A 151 GDT-DIQDLLRGD 162 (165)
T ss_dssp TCH-HHHHHHHTC
T ss_pred CCh-HHHHHHhhc
Confidence 565 677777765
No 62
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=8.7e-31 Score=193.31 Aligned_cols=154 Identities=25% Similarity=0.300 Sum_probs=142.9
Q ss_pred CCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q psy17862 85 GYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTID 164 (265)
Q Consensus 85 g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~ 164 (265)
+.||||+| +..|+.+.++.|+...+.+++..+..|.||||+ +..|+.+++++|+++|++++.++..
T Consensus 2 ~~~~L~~A-------------~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~ 67 (156)
T 1bd8_A 2 AGDRLSGA-------------AARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTS 67 (156)
T ss_dssp HHHHHHHH-------------HHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT
T ss_pred cchHHHHH-------------HHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC
Confidence 34677777 889999999999997666888999999999999 9999999999999999999999999
Q ss_pred CChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcC
Q psy17862 165 GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSG 244 (265)
Q Consensus 165 g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~ 244 (265)
|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+. +++++|++. ++++.+|..|.|||++|+..|
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~~ 144 (156)
T 1bd8_A 68 GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHT-AVVSFLAAE--SDLHRRDARGLTPLELALQRG 144 (156)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCH-HHHHHHHTT--SCTTCCCTTSCCHHHHHHHSC
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChH-HHHHHHHhc--cCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999998 788888887 889999999999999999999
Q ss_pred Cchhhhhcchh
Q psy17862 245 IHYGLFETIEP 255 (265)
Q Consensus 245 ~~~~~~~ll~~ 255 (265)
+.+.++.|+++
T Consensus 145 ~~~~v~~Ll~~ 155 (156)
T 1bd8_A 145 AQDLVDILQGH 155 (156)
T ss_dssp CHHHHHHHHTT
T ss_pred cHHHHHHHHhh
Confidence 88888888764
No 63
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=4.6e-31 Score=196.65 Aligned_cols=157 Identities=26% Similarity=0.356 Sum_probs=143.9
Q ss_pred CCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy17862 82 DKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT 161 (265)
Q Consensus 82 d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 161 (265)
|..|.|||+.| +..|+.++++.|+...+...+..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 5 ~~~~~~~l~~A-------------~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 71 (165)
T 3twr_A 5 NSEADRQLLEA-------------AKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK 71 (165)
T ss_dssp -CHHHHHHHHH-------------HHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred cchhhHHHHHH-------------HHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCcc
Confidence 56677888888 77999999999999878888888899999999999999999999999999999999
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHh
Q psy17862 162 TIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIAT 241 (265)
Q Consensus 162 ~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~ 241 (265)
+..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..|+. +++++|+++ |++++.+|..|.||+++|+
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 72 DKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKY-EICKLLLQH-GADPTKKNRDGNTPLDLVK 149 (165)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCTGGGSC
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCCcccCCCCCChhHhHh
Confidence 99999999999999999999999999999999999999999999999998 788999887 8999999999999999987
Q ss_pred hcCCchhhhhcch
Q psy17862 242 RSGIHYGLFETIE 254 (265)
Q Consensus 242 ~~~~~~~~~~ll~ 254 (265)
. |+.+.+..|++
T Consensus 150 ~-~~~~i~~~L~~ 161 (165)
T 3twr_A 150 D-GDTDIQDLLRG 161 (165)
T ss_dssp T-TCHHHHHHHHT
T ss_pred c-CChHHHHHHhh
Confidence 7 76766665554
No 64
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=2.5e-30 Score=190.83 Aligned_cols=154 Identities=27% Similarity=0.375 Sum_probs=144.4
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCC
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDK 130 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 130 (265)
++++|++|+..|+.+.+++|++..+.+++..|..|.||||+ +. .|+.+++++|++ .|.+++..+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~-------------~~~~~~v~~Ll~-~g~~~~~~~~ 66 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MM-------------FGSTAIALELLK-QGASPNVQDT 66 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SC-------------TTCHHHHHHHHH-TTCCTTCCCT
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HH-------------cCCHHHHHHHHH-CCCCCCCcCC
Confidence 46899999999999999999998667899999999999999 54 588999999998 5888999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCC
Q psy17862 131 DGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSH 210 (265)
Q Consensus 131 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~ 210 (265)
.|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|++. ++++.+|..|.||||+|+..|+
T Consensus 67 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 67 SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCC
T ss_pred CCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCc
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred hHHHHHHHhhC
Q psy17862 211 SRDVLMILLSH 221 (265)
Q Consensus 211 ~~~~~~~L~~~ 221 (265)
. +++++|+++
T Consensus 146 ~-~~v~~Ll~~ 155 (156)
T 1bd8_A 146 Q-DLVDILQGH 155 (156)
T ss_dssp H-HHHHHHHTT
T ss_pred H-HHHHHHHhh
Confidence 8 788888764
No 65
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.9e-30 Score=189.99 Aligned_cols=142 Identities=30% Similarity=0.341 Sum_probs=132.3
Q ss_pred HhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q psy17862 106 AEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLL 185 (265)
Q Consensus 106 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 185 (265)
+..|+.+++++|++. +.+.+ .+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+
T Consensus 10 ~~~g~~~~v~~Ll~~-g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 87 (153)
T 1awc_B 10 ARAGQDDEVRILMAN-GAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL 87 (153)
T ss_dssp HHHTCHHHHHHHHHH-TCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHcCCHHHHHHHHHc-CCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH
Confidence 889999999999995 55554 5888999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhh
Q psy17862 186 NYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFE 251 (265)
Q Consensus 186 ~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 251 (265)
++|++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+++|+..|+.+.++.
T Consensus 88 ~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~~~~i~~~ 151 (153)
T 1awc_B 88 KHGADVNAKDMLKMTALHWATEHNHQ-EVVELLIKY-GADVHTQSKFCKTAFDISIDNGNEDLAEI 151 (153)
T ss_dssp TTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HcCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCccccCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999999999999999999998 789999988 89999999999999999999997766654
No 66
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=3.3e-30 Score=202.41 Aligned_cols=185 Identities=23% Similarity=0.215 Sum_probs=154.6
Q ss_pred HHHHHhhcCceeeeeeecccCcccc-cccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCcc-----ccCCCCCCcHH
Q psy17862 16 QLQESIRDGSFNIGQVSAWDDDVVG-IEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLV-----DAVDKDGYSPL 89 (265)
Q Consensus 16 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~-----~~~d~~g~tpl 89 (265)
.|..|++.|+++..... +.. ..+....+..+.||||+|+..|+.+++++|++. +.++ +..|..|.|||
T Consensus 6 ~L~~A~~~g~~~~v~~L-----l~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 6 PLLLAAKENDVQALSKL-----LKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp HHHHHHHTTCHHHHHHH-----HTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHH
T ss_pred HHHHHHHcCCHHHHHHH-----HHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHH
Confidence 35566677665332221 111 112223345678999999999999999999998 6665 66778999999
Q ss_pred HHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCC-------------CCChHHHHHHHcCCHHHHHHHHHcCC
Q psy17862 90 HRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDK-------------DGYSPLHRACYNGHANIVELLIQWGA 156 (265)
Q Consensus 90 ~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~Ll~~~~ 156 (265)
|+| +..|+.+++++|++ .+.+++..+. .|.||||+|+..|+.+++++|+++|+
T Consensus 80 ~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 145 (232)
T 2rfa_A 80 HIA-------------VINQNVNLVRALLA-RGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA 145 (232)
T ss_dssp HHH-------------HHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHH-------------HHcCCHHHHHHHHh-CCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 999 67899999999999 4777777655 79999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHhcCCHHHH----HHHHhcCCCc------cccCCCCCcHHHHHHhCCChHHHHHHHhhC
Q psy17862 157 DTQKTTIDGWTPLHSACKWNNTECV----IVLLNYGVDV------NAQTNGGLTPLHLAASHSHSRDVLMILLSH 221 (265)
Q Consensus 157 ~~~~~~~~g~t~l~~a~~~~~~~~v----~~Ll~~g~~~------~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~ 221 (265)
+++.+|..|.||||+|+..++.+++ ++|++.|+++ +.+|..|.||||+|+..|+. +++++|+++
T Consensus 146 ~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~-~~v~~Ll~~ 219 (232)
T 2rfa_A 146 DIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI-VMFQHLMQK 219 (232)
T ss_dssp CTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCH-HHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCH-HHHHHHHhc
Confidence 9999999999999999999999988 9999999988 58899999999999999998 788888886
No 67
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.8e-30 Score=196.13 Aligned_cols=158 Identities=25% Similarity=0.296 Sum_probs=144.7
Q ss_pred CCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy17862 83 KDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTT 162 (265)
Q Consensus 83 ~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 162 (265)
..+.+||+.| +..|+.++++.|+...+.+++..+..|.||||+|+..|+.+++++|++.|++++..+
T Consensus 3 ~~~~~~l~~A-------------~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 69 (179)
T 3f6q_A 3 PEFMDDIFTQ-------------CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMN 69 (179)
T ss_dssp ----CCHHHH-------------HHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHHH-------------HHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcC
Confidence 4567888888 779999999999998888899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhh
Q psy17862 163 IDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATR 242 (265)
Q Consensus 163 ~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~ 242 (265)
..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. +++++|+++ |++++.+|..|.||+++|+.
T Consensus 70 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 70 RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQD-QVAEDLVAN-GALVSICNKYGEMPVDKAKA 147 (179)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHT-TCCSSBCCTTSCCGGGGSCH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHC-CCCcchhccCCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999999999997 789999988 89999999999999999999
Q ss_pred cCCchhhhhcchh
Q psy17862 243 SGIHYGLFETIEP 255 (265)
Q Consensus 243 ~~~~~~~~~ll~~ 255 (265)
.++...+..+++.
T Consensus 148 ~~~~~~~~~L~~~ 160 (179)
T 3f6q_A 148 PLRELLRERAEKM 160 (179)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHh
Confidence 9977666666654
No 68
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=6.7e-31 Score=211.51 Aligned_cols=205 Identities=22% Similarity=0.269 Sum_probs=157.7
Q ss_pred HHHHHHHhhcCceeeeeeecccCcccccccCC-----CcCCCCcccHHHHHhc---CChHHHHHhhccCCCc-------c
Q psy17862 14 MQQLQESIRDGSFNIGQVSAWDDDVVGIEDSR-----NPQDKNKRNILEAAEH---NDSKTLEALLDHDSTL-------V 78 (265)
Q Consensus 14 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~A~~~---g~~~~v~~ll~~~~~~-------~ 78 (265)
...|..|++.|+.+...... +.......+. ..+..+.||||+|+.. |+.++|++|++. |++ +
T Consensus 14 ~t~L~~A~~~g~~~~v~~Ll--~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i 90 (273)
T 2pnn_A 14 RRSIFDAVAQSNCQELESLL--PFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFV 90 (273)
T ss_dssp HHHHHHHHHTTCSSTTTTHH--HHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHH
T ss_pred chHHHHHHHcCCHHHHHHHH--HHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHh
Confidence 35688899998874422211 1110111111 2345788999999987 999999999997 433 2
Q ss_pred c----cCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCC--------------CCChHHHHHH
Q psy17862 79 D----AVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDK--------------DGYSPLHRAC 140 (265)
Q Consensus 79 ~----~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~--------------~g~t~l~~a~ 140 (265)
+ ..|..|.||||+| +..|+.+++++|++ .|.+++..+. .|.||||+|+
T Consensus 91 ~~~~~~~d~~g~tpL~~A-------------~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~ 156 (273)
T 2pnn_A 91 NASYTDSYYKGQTALHIA-------------IERRNMTLVTLLVE-NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAA 156 (273)
T ss_dssp TCCCCSTTTTTCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHH
T ss_pred hcccccccCCCCCHHHHH-------------HHcCCHHHHHHHHH-CCCCcCccccccccccccccccccCCCCHHHHHH
Confidence 2 2567899999999 67899999999999 4888888876 7999999999
Q ss_pred HcCCHHHHHHHHH---cCCCCCCCCCCCChHHHHHHhcCC---------HHHHHHHHhcCCCcc-------ccCCCCCcH
Q psy17862 141 YNGHANIVELLIQ---WGADTQKTTIDGWTPLHSACKWNN---------TECVIVLLNYGVDVN-------AQTNGGLTP 201 (265)
Q Consensus 141 ~~~~~~~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~g~~~~-------~~~~~g~tp 201 (265)
..|+.+++++|++ +|++++.++..|.||||+|+..++ .+++++|+++|++++ .+|..|+||
T Consensus 157 ~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~Tp 236 (273)
T 2pnn_A 157 CTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTP 236 (273)
T ss_dssp HTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCH
T ss_pred HcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCH
Confidence 9999999999999 999999999999999999999988 899999999999986 489999999
Q ss_pred HHHHHhCCChHHHHHHHhhCCCC-CCcccCCCCccHH
Q psy17862 202 LHLAASHSHSRDVLMILLSHPNV-DPHILSTSNESAR 237 (265)
Q Consensus 202 L~~a~~~~~~~~~~~~L~~~~~~-~~~~~~~~g~t~l 237 (265)
||+|+..|+. +++++|+++ |+ |+......+.+|-
T Consensus 237 L~~A~~~g~~-~iv~~Ll~~-ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 237 LALAASSGKI-GVLAYILQR-EIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHHTTCH-HHHHHHHHH-HTC-------------
T ss_pred HHHHHHhChH-HHHHHHHHC-CCCCchhhhhhhhhcc
Confidence 9999999998 788899888 56 8888877777664
No 69
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3.3e-30 Score=207.83 Aligned_cols=168 Identities=24% Similarity=0.361 Sum_probs=151.2
Q ss_pred cCCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcc
Q psy17862 47 PQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVD 126 (265)
Q Consensus 47 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 126 (265)
.+..+.||||+|+..|+.++|++|++.+..+++..|..|.||||+|+.... ...++.++++.|+.. +...+
T Consensus 107 ~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~--------~~~~~~~~v~~Ll~~-g~~~~ 177 (276)
T 4hbd_A 107 ADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATL--------KTQDDIETVLQLFRL-GNINA 177 (276)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCC--------CSHHHHHHHHHHHHH-SCTTC
T ss_pred CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHh--------hhhhhHHHHHHHHHc-CCCcc
Confidence 345688999999999999999999999445999999999999999954322 256889999999985 67777
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHh-cCCCccccCCCCCcHHHHH
Q psy17862 127 AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLN-YGVDVNAQTNGGLTPLHLA 205 (265)
Q Consensus 127 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpL~~a 205 (265)
..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++ .|++++.+|..|.||||+|
T Consensus 178 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A 257 (276)
T 4hbd_A 178 KASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVA 257 (276)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHH
Confidence 888899999999999999999999999999999999999999999999999999999999 8999999999999999999
Q ss_pred HhCCChHHHHHHHhhCCCC
Q psy17862 206 ASHSHSRDVLMILLSHPNV 224 (265)
Q Consensus 206 ~~~~~~~~~~~~L~~~~~~ 224 (265)
+..|+. +++++|+++.++
T Consensus 258 ~~~g~~-~iv~~Ll~~~~i 275 (276)
T 4hbd_A 258 LDAGQS-EIASMLYSRMNI 275 (276)
T ss_dssp HHHTCH-HHHHHHHHHCCC
T ss_pred HHcCCH-HHHHHHHhccCC
Confidence 999998 788888887553
No 70
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=3e-30 Score=191.56 Aligned_cols=155 Identities=25% Similarity=0.306 Sum_probs=142.9
Q ss_pred CCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy17862 84 DGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI 163 (265)
Q Consensus 84 ~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 163 (265)
...||||+| +..|+.+++++|++ .+.+++..+..|.||||+|+. |+.+++++|++.|++++..+.
T Consensus 4 ~~~~~L~~A-------------~~~g~~~~v~~Ll~-~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~ 68 (162)
T 1ihb_A 4 PWGNELASA-------------AARGDLEQLTSLLQ-NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDR 68 (162)
T ss_dssp -CHHHHHHH-------------HHHTCHHHHHHHTT-SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCT
T ss_pred hHhhHHHHH-------------HHcCCHHHHHHHHh-CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCC
Confidence 355777777 78999999999998 578889999999999999999 999999999999999999999
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCC-CcccCCCCccHHHHHhh
Q psy17862 164 DGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVD-PHILSTSNESAREIATR 242 (265)
Q Consensus 164 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~-~~~~~~~g~t~l~~a~~ 242 (265)
.|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+. +++++|+++ |.+ ++..+..|.||||+|+.
T Consensus 69 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~-g~~~~~~~~~~g~t~l~~A~~ 146 (162)
T 1ihb_A 69 TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHL-RVVEFLVKH-TASNVGHRNHKGDTACDLARL 146 (162)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHH-SCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHc-cCCCCCCcCCCCCcHHHHHHH
Confidence 999999999999999999999999999999999999999999999998 788888887 565 69999999999999999
Q ss_pred cCCchhhhhcchh
Q psy17862 243 SGIHYGLFETIEP 255 (265)
Q Consensus 243 ~~~~~~~~~ll~~ 255 (265)
.|+.+.++.|++.
T Consensus 147 ~~~~~~~~~Ll~~ 159 (162)
T 1ihb_A 147 YGRNEVVSLMQAN 159 (162)
T ss_dssp TTCHHHHHHHHHT
T ss_pred cCCHHHHHHHHHh
Confidence 9998888888764
No 71
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.97 E-value=2.1e-30 Score=206.58 Aligned_cols=189 Identities=21% Similarity=0.192 Sum_probs=156.4
Q ss_pred HHHHHHhhcCceeeeeeecccCcccccccCCC-----cCCCCcccHHHHHhc---CChHHHHHhhccCCCcccc------
Q psy17862 15 QQLQESIRDGSFNIGQVSAWDDDVVGIEDSRN-----PQDKNKRNILEAAEH---NDSKTLEALLDHDSTLVDA------ 80 (265)
Q Consensus 15 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~A~~~---g~~~~v~~ll~~~~~~~~~------ 80 (265)
..|..|++.|+.+... .+.+.+.....+.+ .+..+.||||+|+.. |+.++|++|++. +.+++.
T Consensus 4 t~L~~A~~~g~~~~v~--~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~ 80 (256)
T 2etb_A 4 DRLFSVVSRGVPEELT--GLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-DKDSGNPKPLVN 80 (256)
T ss_dssp HHHHHHHHHTCGGGGT--THHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-HHHTTCSSCGGG
T ss_pred cHHHHHHHcCCHHHHH--HHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc-CCcccchhhhcc
Confidence 3567788888763221 11111111122222 356788999999999 999999999987 555543
Q ss_pred -----CCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCC-------------CChHHHHHHHc
Q psy17862 81 -----VDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKD-------------GYSPLHRACYN 142 (265)
Q Consensus 81 -----~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~-------------g~t~l~~a~~~ 142 (265)
.|..|.||||+| +..|+.+++++|++ .|.+++..+.. |.||||+|+..
T Consensus 81 ~~~~~~d~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 146 (256)
T 2etb_A 81 AQCTDEFYQGHSALHIA-------------IEKRSLQCVKLLVE-NGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146 (256)
T ss_dssp CCCCSTTTTTCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT
T ss_pred cccccccccCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCcccccccccccccccccCCCCHHHHHHHc
Confidence 346799999999 67899999999999 57888888876 99999999999
Q ss_pred CCHHHHHHHHH---cCCCCCCCCCCCChHHHHHHh--cCCHH-------HHHHHHhcCCCc-------cccCCCCCcHHH
Q psy17862 143 GHANIVELLIQ---WGADTQKTTIDGWTPLHSACK--WNNTE-------CVIVLLNYGVDV-------NAQTNGGLTPLH 203 (265)
Q Consensus 143 ~~~~~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~--~~~~~-------~v~~Ll~~g~~~-------~~~~~~g~tpL~ 203 (265)
|+.+++++|++ +|++++.+|..|.||||+|+. .++.+ ++++|+++|+++ +.+|..|.||||
T Consensus 147 ~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 147 KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 99999999999 999999999999999999999 78888 999999999999 899999999999
Q ss_pred HHHhCCChHHHHHHHhhC
Q psy17862 204 LAASHSHSRDVLMILLSH 221 (265)
Q Consensus 204 ~a~~~~~~~~~~~~L~~~ 221 (265)
+|+..|+. +++++|+++
T Consensus 227 ~A~~~g~~-~~v~~Ll~~ 243 (256)
T 2etb_A 227 LAAKEGKI-EIFRHILQR 243 (256)
T ss_dssp HHHHTTCH-HHHHHHHHH
T ss_pred HHHHhCCH-HHHHHHHhC
Confidence 99999998 788888876
No 72
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=1.4e-29 Score=206.14 Aligned_cols=184 Identities=23% Similarity=0.372 Sum_probs=160.0
Q ss_pred HHHhcCChHHHHHhhccCCCcccc---------CCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCccc
Q psy17862 57 EAAEHNDSKTLEALLDHDSTLVDA---------VDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDA 127 (265)
Q Consensus 57 ~A~~~g~~~~v~~ll~~~~~~~~~---------~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 127 (265)
.++..+..+.++.++... ..+.. .+..|.||||+| +..|+.+++++|+. .|.+++.
T Consensus 4 ~~a~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~l~~A-------------~~~g~~~~v~~Ll~-~g~~~~~ 68 (299)
T 1s70_B 4 ADAKQKRNEQLKRWIGSE-TDLEPPVVKRKKTKVKFDDGAVFLAA-------------CSSGDTEEVLRLLE-RGADINY 68 (299)
T ss_dssp HHHHHHHHHHHHHHHHTT-TSSCCSCCCCSCCCCEECHHHHHHHH-------------HHHTCHHHHHHHHH-HCCCTTC
T ss_pred hHHHHHHHHHHHHHHccc-cccccccccCcccccccCCccHHHHH-------------HHcCCHHHHHHHHH-cCCCCcc
Confidence 467778888888888763 22221 234567899999 77899999999998 4788999
Q ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCC-----------
Q psy17862 128 VDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTN----------- 196 (265)
Q Consensus 128 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~----------- 196 (265)
.+..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++.
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 148 (299)
T 1s70_B 69 ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE 148 (299)
T ss_dssp BCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999998876654
Q ss_pred -------------------------------------------------CCCcHHHHHHhCCChHHHHHHHhhCCCCCCc
Q psy17862 197 -------------------------------------------------GGLTPLHLAASHSHSRDVLMILLSHPNVDPH 227 (265)
Q Consensus 197 -------------------------------------------------~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~ 227 (265)
.|.||||+|+..|+. +++++|++. |++++
T Consensus 149 ~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~-~~v~~Ll~~-g~d~~ 226 (299)
T 1s70_B 149 EAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYT-EVLKLLIQA-RYDVN 226 (299)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH-HHHHHHHTT-TCCTT
T ss_pred cchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcH-HHHHHHHHc-CCCCC
Confidence 466888889999887 788899887 89999
Q ss_pred ccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 228 ILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 228 ~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
.+|..|.||||+|+..|+.+.++.|++.-.
T Consensus 227 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 256 (299)
T 1s70_B 227 IKDYDGWTPLHAAAHWGKEEACRILVENLC 256 (299)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CcCCCCCcHHHHHHhcCCHHHHHHHHHcCC
Confidence 999999999999999999999999888743
No 73
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=5.8e-31 Score=207.93 Aligned_cols=179 Identities=21% Similarity=0.287 Sum_probs=132.2
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
..+.|||+.|+..|+.+.++.|++. |++++.. ..|.||||+| +..|+.++++.|+. .+.+++..
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~~-~~~~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~ 66 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAH-GMRVKFN-PLPLALLLDS-------------SLEGEFDLVQRIIY-EVDDPSLP 66 (239)
T ss_dssp ------------------------------------CHHHHHHH-------------HHHTCHHHHHHHTS-TTSSCCCC
T ss_pred ccccccCchhhhhhhHHHHHHHhcc-CCCcccC-chhhHHHHHH-------------HHcCCHHHHHHHHH-cCCCCCCc
Confidence 4578999999999999999999998 8888864 7889999999 77899999999998 56789999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCC-cHHHHH--
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGL-TPLHLA-- 205 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~-tpL~~a-- 205 (265)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++.++..|. ||||+|
T Consensus 67 d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~ 146 (239)
T 1ycs_B 67 NDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEE 146 (239)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998877 999999
Q ss_pred HhCCChHHHHHHHhhCCCCCCccc---------CCCCccHHHHHhhcCC
Q psy17862 206 ASHSHSRDVLMILLSHPNVDPHIL---------STSNESAREIATRSGI 245 (265)
Q Consensus 206 ~~~~~~~~~~~~L~~~~~~~~~~~---------~~~g~t~l~~a~~~~~ 245 (265)
+..|+. +++++|+.. +++++.. +..+.++.+++.+.|.
T Consensus 147 ~~~g~~-~~~~~Ll~~-~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 147 MEEGYT-QCSQFLYGV-QEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp SSTTCC-CHHHHHHHH-HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred hhhccH-HHHHHHHHh-hhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 777887 678888876 6776665 6678999999988885
No 74
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.96 E-value=7.9e-30 Score=203.71 Aligned_cols=190 Identities=22% Similarity=0.211 Sum_probs=155.3
Q ss_pred HHHHHHhhcCceeeeeeecccCcccccccCC-----CcCCCCcccHHHHH---hcCChHHHHHhhccCC----------C
Q psy17862 15 QQLQESIRDGSFNIGQVSAWDDDVVGIEDSR-----NPQDKNKRNILEAA---EHNDSKTLEALLDHDS----------T 76 (265)
Q Consensus 15 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~A~---~~g~~~~v~~ll~~~~----------~ 76 (265)
..|..|++.|+.+.... +.+.+.....+. ..+..+.||||+|+ ..|+.++|++|++.+. .
T Consensus 7 ~~L~~A~~~g~~~~v~~--ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 84 (260)
T 3jxi_A 7 PILFDIVSRGSPDGLEG--LLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINS 84 (260)
T ss_dssp HHHHHHHHHTCGGGGTT--HHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTC
T ss_pred HHHHHHHHhCCHHHHHH--HHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcc
Confidence 46788888888643211 111111111111 12255889999999 7799999999999721 3
Q ss_pred ccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCC--------------CCCChHHHHHHHc
Q psy17862 77 LVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD--------------KDGYSPLHRACYN 142 (265)
Q Consensus 77 ~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~--------------~~g~t~l~~a~~~ 142 (265)
.++..|..|.||||+| +..|+.+++++|++ .|.+++..+ ..|.||||+|+..
T Consensus 85 ~~~~~d~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 150 (260)
T 3jxi_A 85 PFRDVYYRGQTALHIA-------------IERRCKHYVELLVE-KGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACT 150 (260)
T ss_dssp CBCCSSEESBCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHT
T ss_pred cccccccCCCCHHHHH-------------HHcCCHHHHHHHHh-CCCCcCccccccccCcccccccccCCCCHHHHHHHc
Confidence 3455566899999999 67899999999999 588888888 6899999999999
Q ss_pred CCHHHHHHHHH---cCCCCCCCCCCCChHHHHHHhcCC---------HHHHHHHHhcCCCc-------cccCCCCCcHHH
Q psy17862 143 GHANIVELLIQ---WGADTQKTTIDGWTPLHSACKWNN---------TECVIVLLNYGVDV-------NAQTNGGLTPLH 203 (265)
Q Consensus 143 ~~~~~~~~Ll~---~~~~~~~~~~~g~t~l~~a~~~~~---------~~~v~~Ll~~g~~~-------~~~~~~g~tpL~ 203 (265)
|+.+++++|++ +|++++.+|..|.||||+|+..++ .+++++|+++|+++ +.+|..|+||||
T Consensus 151 g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 151 NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred CCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHH
Confidence 99999999999 999999999999999999998887 79999999999998 679999999999
Q ss_pred HHHhCCChHHHHHHHhhC
Q psy17862 204 LAASHSHSRDVLMILLSH 221 (265)
Q Consensus 204 ~a~~~~~~~~~~~~L~~~ 221 (265)
+|+..|+. +++++|+++
T Consensus 231 ~A~~~g~~-~~v~~Ll~~ 247 (260)
T 3jxi_A 231 MAAKTGKI-GIFQHIIRR 247 (260)
T ss_dssp HHHHTTCH-HHHHHHHHH
T ss_pred HHHHcCCH-HHHHHHHHh
Confidence 99999998 788888886
No 75
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=1.5e-28 Score=193.39 Aligned_cols=198 Identities=23% Similarity=0.277 Sum_probs=165.6
Q ss_pred HHHHHhhcCceeeeeeecccCcccccccCCCcCCCCcccHHHHHhcCChHHHHHhhccCCCccccC-CCCCCcHHHHHHH
Q psy17862 16 QLQESIRDGSFNIGQVSAWDDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAV-DKDGYSPLHRACY 94 (265)
Q Consensus 16 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-d~~g~tpl~~A~~ 94 (265)
.|..|++.|+++...... ....+....+..+.+||++|+..|+.+++++|++. +.+++.. +..|.||||+|+.
T Consensus 12 ~l~~A~~~g~~~~~~~Ll-----~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~ 85 (240)
T 3eu9_A 12 DIVKATQYGIYERCRELV-----EAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISK-GAIVDQLGGDLNSTPLHWATR 85 (240)
T ss_dssp CHHHHHHTTCHHHHHHHH-----HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTTBCHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHH-----HcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHc-CCcchhhcCCcCCChhHHHHH
Confidence 366777777764432221 11122223345678999999999999999999998 5566544 4559999999998
Q ss_pred cCc--------------------CchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCC-HHHHHHHHH
Q psy17862 95 NDK--------------------NKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGH-ANIVELLIQ 153 (265)
Q Consensus 95 ~~~--------------------~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~-~~~~~~Ll~ 153 (265)
.++ ...+++.|+..++.+++++|++ .+.+++..+..|.||||+|+..++ .+++++|++
T Consensus 86 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~ 164 (240)
T 3eu9_A 86 QGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIA-KGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT 164 (240)
T ss_dssp HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHh-cCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence 754 3479999999999999999999 578899999999999999997666 899999999
Q ss_pred cCCCCCCCCC-CCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhC
Q psy17862 154 WGADTQKTTI-DGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSH 221 (265)
Q Consensus 154 ~~~~~~~~~~-~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~ 221 (265)
.|++++..+. .|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..|+. +++++|++.
T Consensus 165 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~-~~v~~L~~~ 232 (240)
T 3eu9_A 165 FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNV-WMINHLQEA 232 (240)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCH-HHHHHHHHH
T ss_pred cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcH-HHHHHHHHh
Confidence 9999999887 899999999999999999999999999999999999999999999998 788888876
No 76
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.96 E-value=1.4e-29 Score=208.96 Aligned_cols=178 Identities=14% Similarity=0.071 Sum_probs=145.6
Q ss_pred cHHHHHhcCChHHHHHhhccCCCcccc-CCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCC
Q psy17862 54 NILEAAEHNDSKTLEALLDHDSTLVDA-VDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDG 132 (265)
Q Consensus 54 ~l~~A~~~g~~~~v~~ll~~~~~~~~~-~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g 132 (265)
..+.|+..+..++++.|+.. |++++. .|..|+||||+| +..|+.+++++|++ .|++++.++..|
T Consensus 100 ~~~~a~~~~~~~~~~~l~~~-g~dvn~~~d~~g~TpLh~A-------------a~~g~~~~v~~Ll~-~Gad~n~~d~~g 164 (327)
T 1sw6_A 100 QQHVSFDSLLQEVNDAFPNT-QLNLNIPVDEHGNTPLHWL-------------TSIANLELVKHLVK-HGSNRLYGDNMG 164 (327)
T ss_dssp ----CHHHHHHHHHHHCTTS-CCCSCSCCSTTCCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTBCCTTC
T ss_pred hhHHHHHhhHHHHHHHHHhc-CCCcccccCCCCCcHHHHH-------------HHcCCHHHHHHHHH-cCCCCCCcCCCC
Confidence 34677777778888888877 899999 899999999999 67899999999999 588999999999
Q ss_pred ChHHHHHHHcCC---HHHHHHHHHcC-CCCCCCCCCCChHHHHHHh----cCCHHHHHHHHhc-----------------
Q psy17862 133 YSPLHRACYNGH---ANIVELLIQWG-ADTQKTTIDGWTPLHSACK----WNNTECVIVLLNY----------------- 187 (265)
Q Consensus 133 ~t~l~~a~~~~~---~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~----~~~~~~v~~Ll~~----------------- 187 (265)
.||||+|+..|+ .++++.|++++ ++++.++..|.||||+|+. .++.+++++|++.
T Consensus 165 ~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~ 244 (327)
T 1sw6_A 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244 (327)
T ss_dssp CCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-
T ss_pred CCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhh
Confidence 999999999998 68888888886 6789999999999999999 8999999999987
Q ss_pred ---CCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhh
Q psy17862 188 ---GVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPC 256 (265)
Q Consensus 188 ---g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 256 (265)
|++++.++..|.||||+|+. +++|++. +++.+|..|.||||+|+..|+.+.++.||+.-
T Consensus 245 ~~~g~~~~~~~~~g~t~L~~a~~-------~~~Ll~~---~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~G 306 (327)
T 1sw6_A 245 NEKESKPNDKNGERKDSILENLD-------LKWIIAN---MLNAQDSNGDTCLNIAARLGNISIVDALLDYG 306 (327)
T ss_dssp ---------------CHHHHHCS-------HHHHHHH---TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTT
T ss_pred hcccCCcccccccCCChhHHHHH-------HHHHHHh---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 89999999999999999985 6677765 57899999999999999999999999988764
No 77
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=2.4e-28 Score=180.31 Aligned_cols=146 Identities=23% Similarity=0.253 Sum_probs=118.2
Q ss_pred cccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q psy17862 78 VDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGAD 157 (265)
Q Consensus 78 ~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~ 157 (265)
++..+..|.||||+| +..|+.+++++|++ .+.+++..+..|.||||+|+ .|+.+++++|+++|++
T Consensus 5 ~~~~~~~~~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~ 69 (156)
T 1bi7_B 5 AGSSMEPSADWLATA-------------AARGRVEEVRALLE-AGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAE 69 (156)
T ss_dssp -----CCSTTHHHHH-------------HHHTCHHHHHHHHT-TTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC
T ss_pred ccCCCccchHHHHHH-------------HHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC
Confidence 345578899999999 77899999999998 48889999999999999985 9999999999999999
Q ss_pred CCCCCCCCCh-HHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccH
Q psy17862 158 TQKTTIDGWT-PLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESA 236 (265)
Q Consensus 158 ~~~~~~~g~t-~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~ 236 (265)
++.++..|.| |||+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. +++++|+++ |++++..+..|.||
T Consensus 70 ~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 70 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHR-DVARYLRAA-AGGTRGSNHARIDA 147 (156)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCH-HHHHHHSSC-C-------------
T ss_pred CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHH-HHHHHHHHc-CCCCCccCcCcCcc
Confidence 9999999999 99999999999999999999999999999999999999999998 799999988 99999999999999
Q ss_pred HHHH
Q psy17862 237 REIA 240 (265)
Q Consensus 237 l~~a 240 (265)
.+-+
T Consensus 148 ~~~~ 151 (156)
T 1bi7_B 148 AEGP 151 (156)
T ss_dssp ----
T ss_pred cccC
Confidence 8754
No 78
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=4.3e-28 Score=174.85 Aligned_cols=131 Identities=23% Similarity=0.316 Sum_probs=87.3
Q ss_pred CCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc
Q psy17862 75 STLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQW 154 (265)
Q Consensus 75 ~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 154 (265)
+.+++..+..|.||||+| +..|+.+++++|++ .+.+++.++..|.||||+|+. ++.+++++|+++
T Consensus 2 ~~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~ 66 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATA-------------AARGQVETVRQLLE-AGADPNALNRFGRRPIQVMMM-GSAQVAELLLLH 66 (136)
T ss_dssp CCCCSCCCCCCSCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH
T ss_pred CCCccCCCCCCccHHHHH-------------HHcCCHHHHHHHHH-cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC
Confidence 345666666667777666 45666666666666 355666666666677777666 666777777766
Q ss_pred CCCCCCCCCC-CChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhC
Q psy17862 155 GADTQKTTID-GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSH 221 (265)
Q Consensus 155 ~~~~~~~~~~-g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~ 221 (265)
|++++.++.. |.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++. +++++|+++
T Consensus 67 g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~ 133 (136)
T 1d9s_A 67 GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHR-DIARYLHAA 133 (136)
T ss_dssp TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCH-HHHHHHHHH
T ss_pred CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHc
Confidence 6666666666 66777777666667777776666666666666666777776666665 556666554
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=4e-28 Score=191.61 Aligned_cols=158 Identities=24% Similarity=0.216 Sum_probs=116.8
Q ss_pred CCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy17862 83 KDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTT 162 (265)
Q Consensus 83 ~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~ 162 (265)
..|.||||.| +..++.+.++.|++ .|.+++. +..|.||||+|+..|+.+++++|++.|++++..+
T Consensus 3 ~~g~t~L~~a-------------~~~~~~~~~~~ll~-~g~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d 67 (239)
T 1ycs_B 3 ITGQVSLPPG-------------KRTNLRKTGSERIA-HGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPN 67 (239)
T ss_dssp -------------------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCC
T ss_pred ccccccCchh-------------hhhhhHHHHHHHhc-cCCCccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 4689999999 77899999999998 5777765 4678999999999999999999999999999999
Q ss_pred CCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCc-cHHHHH-
Q psy17862 163 IDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNE-SAREIA- 240 (265)
Q Consensus 163 ~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~-t~l~~a- 240 (265)
..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+. +++++|+++ |++++..+..|. ||+|+|
T Consensus 68 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~~~~t~l~~a~ 145 (239)
T 1ycs_B 68 DEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNV-QVCKFLVES-GAAVFAMTYSDMQTAADKCE 145 (239)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCH-HHHHHHHHT-TCCTTCCCSSSCCCHHHHCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCcceecCCCCcchHHHHH
Confidence 9999999999999999999999999999999999999999999999998 789999988 899999998877 999999
Q ss_pred -hhcCCchhhhhcchhhh
Q psy17862 241 -TRSGIHYGLFETIEPCF 257 (265)
Q Consensus 241 -~~~~~~~~~~~ll~~~~ 257 (265)
+..|+.+++..|+....
T Consensus 146 ~~~~g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 146 EMEEGYTQCSQFLYGVQE 163 (239)
T ss_dssp SSSTTCCCHHHHHHHHHH
T ss_pred HhhhccHHHHHHHHHhhh
Confidence 78898888888887643
No 80
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=9e-28 Score=173.15 Aligned_cols=131 Identities=18% Similarity=0.174 Sum_probs=124.0
Q ss_pred CCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCC-CCc
Q psy17862 122 STLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNG-GLT 200 (265)
Q Consensus 122 ~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t 200 (265)
+.+++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+. ++.+++++|+++|++++.++.. |.|
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t 80 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR 80 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBC
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCC
Confidence 46778899999999999999999999999999999999999999999999999 9999999999999999999999 999
Q ss_pred HHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchh
Q psy17862 201 PLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEP 255 (265)
Q Consensus 201 pL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~ 255 (265)
|||+|+..|+. +++++|+++ |++++.+|..|.||||+|+..|+.+.++.|++.
T Consensus 81 ~L~~A~~~~~~-~~v~~Ll~~-ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ 133 (136)
T 1d9s_A 81 PVHDAAREGFL-DTLVVLHRA-GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAA 133 (136)
T ss_dssp HHHHHHHHTCH-HHHHHHHHT-CCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHcCCH-HHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99999999998 788999887 899999999999999999999988888888765
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=3.2e-28 Score=184.66 Aligned_cols=147 Identities=17% Similarity=0.094 Sum_probs=127.7
Q ss_pred HhhCCHHHHHHHHhcCCCCcccCC-CCCChHHHHHHHcCCH----HHHHHHHHcCCCCCCCCCCCChHHHHHHhcCC---
Q psy17862 106 AEHNDSKTLEALLDLDSTLVDAVD-KDGYSPLHRACYNGHA----NIVELLIQWGADTQKTTIDGWTPLHSACKWNN--- 177 (265)
Q Consensus 106 ~~~~~~~~~~~ll~~~~~~~~~~~-~~g~t~l~~a~~~~~~----~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~--- 177 (265)
++.|+.+.++.++... .+..+ ..|.||||+|+..++. +++++|+++|++++.++..|.||||+|+..+.
T Consensus 14 a~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~ 90 (186)
T 3t8k_A 14 AMLGTYEDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDI 90 (186)
T ss_dssp HHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCH
T ss_pred HHcCCHHHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcch
Confidence 8899999999998743 33444 6799999999999975 59999999999999999999999999999886
Q ss_pred ---HHHHHHHHhcCCCccccCCCCC-cHHHHHHhCCCh----HHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhh
Q psy17862 178 ---TECVIVLLNYGVDVNAQTNGGL-TPLHLAASHSHS----RDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGL 249 (265)
Q Consensus 178 ---~~~v~~Ll~~g~~~~~~~~~g~-tpL~~a~~~~~~----~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 249 (265)
.+++++|+++|++++.+|..|. ||||+|+..+.. ..++++|++..|++++.+|..|.||||+|++.|+...+
T Consensus 91 ~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~~~~~~v 170 (186)
T 3t8k_A 91 TGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL 170 (186)
T ss_dssp HHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTTTCHHHH
T ss_pred hhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHcCCHHHH
Confidence 6889999999999999999999 999999996543 25888898834999999999999999999999977766
Q ss_pred hhcchh
Q psy17862 250 FETIEP 255 (265)
Q Consensus 250 ~~ll~~ 255 (265)
+.|+..
T Consensus 171 ~~L~~~ 176 (186)
T 3t8k_A 171 KMMEDY 176 (186)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655544
No 82
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=6.1e-28 Score=178.16 Aligned_cols=142 Identities=16% Similarity=0.185 Sum_probs=118.2
Q ss_pred CCCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCccc
Q psy17862 48 QDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDA 127 (265)
Q Consensus 48 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 127 (265)
...+.++||+|+..|+.++|++|++. |.+++..|..|.||||+| + .++.+++++|++ .|.+++.
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~-~~~~~~v~~Ll~-~g~~~~~ 72 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVM-------------M-MGSARVAELLLL-HGAEPNC 72 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSS-------------C-TTCHHHHHHHHT-TTCCCCC
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHH-------------H-cCCHHHHHHHHH-cCCCCCC
Confidence 34578999999999999999999998 899999999999999998 3 689999999998 5889999
Q ss_pred CCCCCCh-HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHH
Q psy17862 128 VDKDGYS-PLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLA 205 (265)
Q Consensus 128 ~~~~g~t-~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a 205 (265)
++..|.| |||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++++|+++|++++.++..|.||.+-+
T Consensus 73 ~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred cCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 9999999 99999999999999999999999999999999999999999999999999999999999999999997744
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=5.9e-28 Score=183.17 Aligned_cols=153 Identities=13% Similarity=0.149 Sum_probs=134.1
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCC-CCCCcHHHHHHHcCcCchHHHHHHhhCCH----HHHHHHHhcCCCCc
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVD-KDGYSPLHRACYNDKNKRKILEAAEHNDS----KTLEALLDLDSTLV 125 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d-~~g~tpl~~A~~~~~~~~~l~~a~~~~~~----~~~~~ll~~~~~~~ 125 (265)
..++|+.|++.|+.+.++.++.. + ++..+ ..|+||||+| +..++. +++++|++ .|+++
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~-~--~~~~~~~~g~T~Lh~A-------------~~~~~~~~~~~iv~~Ll~-~Gadv 68 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEK-G--YEDKESVLKSNILYDV-------------LRNNNDEARYKISMFLIN-KGADI 68 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHH-S--SSCHHHHHTTTHHHHH-------------TTCSCHHHHHHHHHHHHH-TTCCS
T ss_pred cccHHHHHHHcCCHHHHHHHHhc-C--cccccccCCCCHHHHH-------------HHcCCcchHHHHHHHHHH-CCCCC
Confidence 35789999999999999999987 3 34455 6799999999 445654 58999998 68999
Q ss_pred ccCCCCCChHHHHHHHcCC------HHHHHHHHHcCCCCCCCCCCCC-hHHHHHHhcC-----CHHHHHHHHh-cCCCcc
Q psy17862 126 DAVDKDGYSPLHRACYNGH------ANIVELLIQWGADTQKTTIDGW-TPLHSACKWN-----NTECVIVLLN-YGVDVN 192 (265)
Q Consensus 126 ~~~~~~g~t~l~~a~~~~~------~~~~~~Ll~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~v~~Ll~-~g~~~~ 192 (265)
+.++..|.||||+|+..++ .+++++|+++|++++.+|..|. ||||+|+..+ ..+++++|++ .|++++
T Consensus 69 n~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~ 148 (186)
T 3t8k_A 69 KSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLL 148 (186)
T ss_dssp SCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTT
T ss_pred CCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCc
Confidence 9999999999999999887 6889999999999999999999 9999999954 4569999999 999999
Q ss_pred ccCCCCCcHHHHHHhCCChHHHHHHHhhC
Q psy17862 193 AQTNGGLTPLHLAASHSHSRDVLMILLSH 221 (265)
Q Consensus 193 ~~~~~g~tpL~~a~~~~~~~~~~~~L~~~ 221 (265)
.+|..|+||||+|+..|+. .++++|...
T Consensus 149 ~~d~~G~TpL~~A~~~~~~-~~v~~L~~~ 176 (186)
T 3t8k_A 149 IKDKWGLTALEFVKRCQKP-IALKMMEDY 176 (186)
T ss_dssp CCCTTSCCHHHHHHTTTCH-HHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCCH-HHHHHHHHH
Confidence 9999999999999999997 677887764
No 84
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.94 E-value=6.7e-28 Score=182.65 Aligned_cols=141 Identities=28% Similarity=0.352 Sum_probs=126.3
Q ss_pred CCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy17862 82 DKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT 161 (265)
Q Consensus 82 d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 161 (265)
+..|.||||+| +..|+.++++.|+. +.+++..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 41 ~~~g~t~L~~A-------------~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 105 (183)
T 3deo_A 41 VSEYETPWWTA-------------ARKADEQALSQLLE--DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHR 105 (183)
T ss_dssp HHHHHHHHHHH-------------HHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCHHHHH-------------HHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcC
Confidence 45788999999 77899999999998 7789999999999999999999999999999999999988
Q ss_pred C-CCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHH
Q psy17862 162 T-IDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIA 240 (265)
Q Consensus 162 ~-~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a 240 (265)
+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..++. ..+.+|+++|
T Consensus 106 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-------------------~~~~~~l~~a 166 (183)
T 3deo_A 106 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-------------------TPKGNPMQFG 166 (183)
T ss_dssp CSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-------------------CCCCSHHHHH
T ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-------------------cccccHHHHH
Confidence 8 8899999999999999999999999999999999999999999875322 3468999999
Q ss_pred hhcCCchhhhhcchhh
Q psy17862 241 TRSGIHYGLFETIEPC 256 (265)
Q Consensus 241 ~~~~~~~~~~~ll~~~ 256 (265)
++.|+.+.+..|.+++
T Consensus 167 ~~~~~~~i~~~L~~~~ 182 (183)
T 3deo_A 167 RRIGLEKVINVLEGQV 182 (183)
T ss_dssp HHHHHHHHHHHHHTCC
T ss_pred HHcCHHHHHHHHHHhh
Confidence 9999777776665544
No 85
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=2.3e-27 Score=185.95 Aligned_cols=161 Identities=20% Similarity=0.254 Sum_probs=136.9
Q ss_pred HHHhhccCCCccccC---CCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcC
Q psy17862 67 LEALLDHDSTLVDAV---DKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNG 143 (265)
Q Consensus 67 v~~ll~~~~~~~~~~---d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~ 143 (265)
|+.|+++ +.+++.. +..|.||||+| +..|+.++++.|++ .|.+++..+..|.||||+|+..|
T Consensus 1 v~~ll~~-~~~~~~~~~~~~~~~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~d~~g~tpLh~A~~~g 65 (229)
T 2vge_A 1 MRSVLRK-AGSPRKARRARLNPLVLLLDA-------------ALTGELEVVQQAVK-EMNDPSQPNEEGITALHNAICGA 65 (229)
T ss_dssp ----------CCCCCCCTTSCHHHHHHHH-------------HHHTCHHHHHHHHH-HSSCTTCCCTTSCCHHHHHHHTT
T ss_pred Ceehhcc-CCCCccccccccchhHHHHHH-------------HHcCCHHHHHHHHh-cCCCCCCCCCCCCCHHHHHHHcC
Confidence 4567776 5555443 45667789999 77899999999998 57789999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccC-CCCCcHHHHH--HhCCChHHHHHHHhh
Q psy17862 144 HANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQT-NGGLTPLHLA--ASHSHSRDVLMILLS 220 (265)
Q Consensus 144 ~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpL~~a--~~~~~~~~~~~~L~~ 220 (265)
+.+++++|+++|++++..+..|.||||+|+..++.+++++|++.|++++.++ ..|+||||+| +..|+. +++++|++
T Consensus 66 ~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~-~~v~~Ll~ 144 (229)
T 2vge_A 66 NYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA-DCATYLAD 144 (229)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHH-HHHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChH-HHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986 6999999999 888877 78899988
Q ss_pred CCCCCCcccCCCCccHHHHHhhcC
Q psy17862 221 HPNVDPHILSTSNESAREIATRSG 244 (265)
Q Consensus 221 ~~~~~~~~~~~~g~t~l~~a~~~~ 244 (265)
. |++++..|..|.||++.++..+
T Consensus 145 ~-ga~~~~~~~~~~~~l~~~~~~~ 167 (229)
T 2vge_A 145 V-EQSMGLMNSGAVYALWDYSAEF 167 (229)
T ss_dssp H-HHHTTTSGGGEEEESSCBCCSS
T ss_pred c-CCCcccccCCchHHHHHHhhcc
Confidence 7 8999999999999999665554
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=5.1e-26 Score=163.92 Aligned_cols=124 Identities=32% Similarity=0.332 Sum_probs=104.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhC
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASH 208 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~ 208 (265)
...+.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 44577888888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcch
Q psy17862 209 SHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIE 254 (265)
Q Consensus 209 ~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~ 254 (265)
|+. +++++|+++ |++++..|..|.||||+|+..|+.+.+..|++
T Consensus 91 ~~~-~~v~~Ll~~-g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 91 GHL-EIAEVLLKH-GADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp TCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCH-HHHHHHHHc-CCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 887 677888877 78888888888888888888887777776654
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.94 E-value=1.9e-26 Score=166.38 Aligned_cols=128 Identities=27% Similarity=0.353 Sum_probs=115.8
Q ss_pred CCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHH
Q psy17862 123 TLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPL 202 (265)
Q Consensus 123 ~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL 202 (265)
+++ .++..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||
T Consensus 2 ~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 80 (137)
T 3c5r_A 2 IDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL 80 (137)
T ss_dssp --C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHH
T ss_pred CCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHH
Confidence 344 5788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcc
Q psy17862 203 HLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETI 253 (265)
Q Consensus 203 ~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll 253 (265)
|+|+..|+. +++++|++. |++++.+|..|.||+++|+..+..+.+..+.
T Consensus 81 ~~A~~~~~~-~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~ 129 (137)
T 3c5r_A 81 HDAAKNGHV-DIVKLLLSY-GASRNAVNIFGLRPVDYTDDESMKSLLLLPE 129 (137)
T ss_dssp HHHHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-
T ss_pred HHHHHcCCH-HHHHHHHHc-CCCCCCCCCCCCCHHHHHhhccHHHHHhhcc
Confidence 999999998 788888887 8999999999999999999888555444433
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=2.7e-25 Score=157.56 Aligned_cols=123 Identities=43% Similarity=0.657 Sum_probs=84.2
Q ss_pred CCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy17862 84 DGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI 163 (265)
Q Consensus 84 ~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 163 (265)
+|.||||+| +..|+.+++++|++. +.+++..+..|.||||+|+..++.+++++|++.|++++..+.
T Consensus 1 ~g~t~L~~A-------------~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~ 66 (126)
T 1n0r_A 1 NGRTPLHLA-------------ARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (126)
T ss_dssp CCCCHHHHH-------------HHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCccHHHHH-------------HHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCC
Confidence 356666666 556667777777763 556666666677777777777777777777777777776666
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhC
Q psy17862 164 DGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSH 221 (265)
Q Consensus 164 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~ 221 (265)
.|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..|+. +++++|+++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~-~~~~~Ll~~ 123 (126)
T 1n0r_A 67 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL-EVVKLLLEA 123 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHH
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcH-HHHHHHHHc
Confidence 777777777777777777777777777776677777777777777665 566666654
No 89
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=1.2e-25 Score=161.90 Aligned_cols=113 Identities=35% Similarity=0.466 Sum_probs=63.2
Q ss_pred HhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q psy17862 106 AEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLL 185 (265)
Q Consensus 106 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 185 (265)
+..|+.+++++|++ .+.+++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+
T Consensus 22 ~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll 100 (136)
T 2jab_A 22 ARAGQDDEVRILMA-NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL 100 (136)
T ss_dssp HHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH
T ss_pred HHhCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 44555555555555 24455555555555555555555555555555555555555555555555555555555555555
Q ss_pred hcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhh
Q psy17862 186 NYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLS 220 (265)
Q Consensus 186 ~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~ 220 (265)
++|++++.+|..|.||||+|+..|+. +++++|++
T Consensus 101 ~~g~~~~~~~~~g~tpl~~A~~~~~~-~~~~~Ll~ 134 (136)
T 2jab_A 101 KHGADVNAQDKFGKTAFDISIGNGNE-DLAEILQK 134 (136)
T ss_dssp HTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHH
T ss_pred HcCCCCcCcCCCCCCHHHHHHHCCCH-HHHHHHHH
Confidence 55555555555555555555555554 45555544
No 90
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=3.9e-25 Score=156.69 Aligned_cols=125 Identities=36% Similarity=0.527 Sum_probs=119.3
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCC
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDK 130 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 130 (265)
+.|+|+.|+..|+.+++++|++. +.+++..+..|.||||+| +..++.+++++|+. .+.+++..+.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A-------------~~~~~~~~~~~Ll~-~g~~~~~~~~ 66 (126)
T 1n0r_A 2 GRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLA-------------ARNGHLEVVKLLLE-AGADVNAKDK 66 (126)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCCCT
T ss_pred CccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHH-------------HHcCcHHHHHHHHH-cCCCCcccCC
Confidence 67999999999999999999998 889999999999999999 67899999999999 5788899999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCC
Q psy17862 131 DGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVD 190 (265)
Q Consensus 131 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~ 190 (265)
.|.||||+|+..++.+++++|+++|++++.++..|.|||++|+..++.+++++|+++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 67 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999999999985
No 91
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=4.1e-26 Score=164.57 Aligned_cols=130 Identities=32% Similarity=0.455 Sum_probs=115.4
Q ss_pred CCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc
Q psy17862 75 STLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQW 154 (265)
Q Consensus 75 ~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 154 (265)
|+++ .+|..|.||||+| +..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|+++
T Consensus 1 G~d~-~~~~~g~t~L~~A-------------~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 65 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIA-------------SIKGDIPSVEYLLQ-NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH 65 (137)
T ss_dssp ---C-CCCTTCCCHHHHH-------------HHHTCHHHHHHHHH-TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCC-CcCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 3455 6788999999999 67899999999998 5788999999999999999999999999999999
Q ss_pred CCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhh
Q psy17862 155 GADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLS 220 (265)
Q Consensus 155 ~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~ 220 (265)
|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..+.. +++.+|.+
T Consensus 66 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~-~~l~~l~~ 130 (137)
T 3c5r_A 66 KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMK-SLLLLPEK 130 (137)
T ss_dssp TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHH-HHHSCC--
T ss_pred CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHH-HHHhhccc
Confidence 999999999999999999999999999999999999999999999999999887554 55555544
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.93 E-value=3e-25 Score=157.07 Aligned_cols=114 Identities=26% Similarity=0.297 Sum_probs=104.3
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhC
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASH 208 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~ 208 (265)
+..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcC
Q psy17862 209 SHSRDVLMILLSHPNVDPHILSTSNESAREIATRSG 244 (265)
Q Consensus 209 ~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~ 244 (265)
|+. +++++|+++ |++++.+|..|.||+++|...+
T Consensus 84 ~~~-~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 84 GHV-SCVKLLLSK-GADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHCCCHH
T ss_pred CCH-HHHHHHHHc-CCCCCCcCCCCCCHHHHhCCHH
Confidence 997 788888887 8999999999999999995443
No 93
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.8e-25 Score=176.94 Aligned_cols=169 Identities=26% Similarity=0.291 Sum_probs=141.6
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCC
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDK 130 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~ 130 (265)
+.++++.++..|+.+.+..+... +.+ .+..|.||||+| +..|+.++++.|+. +.+++..+.
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~~-~~~---~~~~g~t~L~~A-------------~~~g~~~~v~~Ll~--~~~~~~~d~ 75 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSYI-AAD---VVSEYETPWWTA-------------ARKADEQALSQLLE--DRDVDAVDE 75 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGGS-CHH---HHHHHHHHHHHH-------------HTTTCHHHHHHTTT--TCCTTCBCT
T ss_pred CccHHHHHHHcCCCccccccccc-ccc---cccCCCCHHHHH-------------HHcCCHHHHHHHHc--CCCCCCcCC
Confidence 34556666666666555444333 222 235689999999 77899999999998 778999999
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC-CCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCC
Q psy17862 131 DGYSPLHRACYNGHANIVELLIQWGADTQKTT-IDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHS 209 (265)
Q Consensus 131 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~ 209 (265)
.|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 76 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~ 155 (244)
T 3ui2_A 76 NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 155 (244)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999888 78999999999999999999999999999999999999999998632
Q ss_pred ChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 210 HSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 210 ~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
. ...+.|||++|+..|+.+.+..|+...+
T Consensus 156 ~-------------------~~~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 156 K-------------------TTPKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp T-------------------TCCCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred h-------------------ccCCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 2 2467999999999998888877776543
No 94
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.92 E-value=5e-25 Score=179.43 Aligned_cols=142 Identities=20% Similarity=0.159 Sum_probs=109.6
Q ss_pred cccHHHHHhcCChHHHHHhhccCCCcccc------CCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCc
Q psy17862 52 KRNILEAAEHNDSKTLEALLDHDSTLVDA------VDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLV 125 (265)
Q Consensus 52 ~~~l~~A~~~g~~~~v~~ll~~~~~~~~~------~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~ 125 (265)
.++|+.|+..|+.+.|+.|+.. +.+++. .+..|.||||+|+..+. .++.+++++|+.. |.++
T Consensus 152 ~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~----------~~~~~iv~~Ll~~-gadv 219 (301)
T 2b0o_E 152 PQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVAN----------QASLPLVDFIIQN-GGHL 219 (301)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCC----------TTTHHHHHHHHHH-SSCT
T ss_pred HHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcc----------cCcHHHHHHHHhc-CCCC
Confidence 4679999999999999999977 788887 57889999999954321 3778888888874 6778
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHH
Q psy17862 126 DAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLA 205 (265)
Q Consensus 126 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a 205 (265)
+..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++ .|.||||+|
T Consensus 220 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A 293 (301)
T 2b0o_E 220 DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVD 293 (301)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC--
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHH
Confidence 88888888888888888888888888888888888888888888888888888888888887765 467888888
Q ss_pred HhCCCh
Q psy17862 206 ASHSHS 211 (265)
Q Consensus 206 ~~~~~~ 211 (265)
+.+|+.
T Consensus 294 ~~~g~~ 299 (301)
T 2b0o_E 294 YSWVIS 299 (301)
T ss_dssp ------
T ss_pred HhcCCc
Confidence 887753
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=1.4e-24 Score=176.82 Aligned_cols=138 Identities=20% Similarity=0.222 Sum_probs=118.8
Q ss_pred hHHHHHHhhCCHHHHHHHHhcCCCCccc------CCCCCChHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCChHHH
Q psy17862 100 RKILEAAEHNDSKTLEALLDLDSTLVDA------VDKDGYSPLHRACYN---GHANIVELLIQWGADTQKTTIDGWTPLH 170 (265)
Q Consensus 100 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 170 (265)
.+++.|+..++.+.++.|+. .+.+++. .+..|.||||+|+.. ++.+++++|+++|++++.+|..|.||||
T Consensus 153 ~~L~~A~~~g~~~~v~~ll~-~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh 231 (301)
T 2b0o_E 153 QRLWTAICNRDLLSVLEAFA-NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 231 (301)
T ss_dssp HHHHHHHHTTCHHHHHHHHH-TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHH
T ss_pred HHHhhhhhccCHHHHHHHHh-cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHH
Confidence 56888899999999999997 5777776 688999999999997 8999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCc
Q psy17862 171 SACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIH 246 (265)
Q Consensus 171 ~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 246 (265)
+|+..++.+++++|+++|++++.+|..|.||||+|+..|+. +++++|++. +++ .|.||||+|+..|+.
T Consensus 232 ~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~-~iv~~Ll~~-ga~------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 232 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK-ECEELLEQA-QAG------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCH-HHHHHHHHH-HHH------TTSSCCC--------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHh-cCC------CCCChhHHHHhcCCc
Confidence 99999999999999999999999999999999999999998 788888876 443 689999999999854
No 96
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=3.3e-24 Score=162.24 Aligned_cols=139 Identities=26% Similarity=0.318 Sum_probs=125.2
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
..+.||||+|+..|+.++++.|++ +.+++..|..|.||||+| +..|+.+++++|++ .|.+++..
T Consensus 42 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A-------------~~~~~~~~v~~Ll~-~ga~~~~~ 105 (183)
T 3deo_A 42 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFV-------------AGLGSDKCVRLLAE-AGADLDHR 105 (183)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCCCTTSCCHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCcCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCcC
Confidence 466799999999999999999998 789999999999999999 67899999999999 57888888
Q ss_pred C-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHh
Q psy17862 129 D-KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAAS 207 (265)
Q Consensus 129 ~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~ 207 (265)
+ ..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++. ..+.+||++|+.
T Consensus 106 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~ 168 (183)
T 3deo_A 106 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRR 168 (183)
T ss_dssp CSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHH
T ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHH
Confidence 7 8899999999999999999999999999999999999999999763322 456899999999
Q ss_pred CCChHHHHHHHhhC
Q psy17862 208 HSHSRDVLMILLSH 221 (265)
Q Consensus 208 ~~~~~~~~~~L~~~ 221 (265)
.|+. +++++|.++
T Consensus 169 ~~~~-~i~~~L~~~ 181 (183)
T 3deo_A 169 IGLE-KVINVLEGQ 181 (183)
T ss_dssp HHHH-HHHHHHHTC
T ss_pred cCHH-HHHHHHHHh
Confidence 9876 899998765
No 97
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.91 E-value=7.9e-27 Score=195.08 Aligned_cols=147 Identities=16% Similarity=0.149 Sum_probs=108.3
Q ss_pred CcccHHHHHhcCChHHHHHhhccCCCc--cccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCC---c
Q psy17862 51 NKRNILEAAEHNDSKTLEALLDHDSTL--VDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTL---V 125 (265)
Q Consensus 51 ~~~~l~~A~~~g~~~~v~~ll~~~~~~--~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~---~ 125 (265)
..||||+|+..|+.++|++|++.+..+ .+..+..|.||||+| +..|+.+++++|++. |.+ .
T Consensus 92 ~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~A-------------a~~G~~eiv~~Ll~~-gad~~~~ 157 (376)
T 2aja_A 92 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLA-------------AENGHLHVLNRLCEL-APTEIMA 157 (376)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHH-------------HHTTCHHHHHHHHHS-CTTTHHH
T ss_pred cCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHH-------------HHcCCHHHHHHHHhC-CCCcccc
Confidence 359999999999999999999983311 223455678999999 667888888888874 422 1
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC--CCCCCChHHHHHH-hcCCHHHHHHHHhcCCCccccCCCCCcHH
Q psy17862 126 DAVDKDGYSPLHRACYNGHANIVELLIQWGADTQK--TTIDGWTPLHSAC-KWNNTECVIVLLNYGVDVNAQTNGGLTPL 202 (265)
Q Consensus 126 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~--~~~~g~t~l~~a~-~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL 202 (265)
+..+.. .||||+|+..|+.+++++|+++|++++. .+..|.||||+|+ ..|+.+++++|++.|++ |.|||
T Consensus 158 ~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL 229 (376)
T 2aja_A 158 MIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAE 229 (376)
T ss_dssp HHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHH
T ss_pred ccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHH
Confidence 222222 7888888888888888888888887766 6777888888888 88888888888876632 67888
Q ss_pred HHHHhCCChHHHHHHHhh
Q psy17862 203 HLAASHSHSRDVLMILLS 220 (265)
Q Consensus 203 ~~a~~~~~~~~~~~~L~~ 220 (265)
++|+..|+. +++++|++
T Consensus 230 ~~Aa~~g~~-evv~lL~~ 246 (376)
T 2aja_A 230 IHEFEYGEK-YVNPFIAR 246 (376)
T ss_dssp HCTTTTTTT-THHHHHHH
T ss_pred HHHHHCCCH-HHHHHHHh
Confidence 888888776 46666654
No 98
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=4.3e-25 Score=172.18 Aligned_cols=137 Identities=23% Similarity=0.296 Sum_probs=106.0
Q ss_pred CCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHc-CCCCC
Q psy17862 81 VDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQW-GADTQ 159 (265)
Q Consensus 81 ~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~-~~~~~ 159 (265)
.+..|.||||+| +..|+.++++.|+. .+.+++..+..|.||||+|+..|+.+++++|++. |++++
T Consensus 69 ~~~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~ 134 (222)
T 3ehr_A 69 QAESIDNPLHEA-------------AKRGNLSWLRECLD-NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELN 134 (222)
T ss_dssp HEEEESCHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCC
T ss_pred cccccccccccc-------------cccCcHHHHHHHHh-CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCcc
Confidence 345677888888 67888999999998 5778888888999999999999999999999998 89999
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCC
Q psy17862 160 KTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSN 233 (265)
Q Consensus 160 ~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g 233 (265)
..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..++. ++++.|+.. +++....+.+|
T Consensus 135 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~-~~l~~l~~~-~~~~~~~~~~~ 206 (222)
T 3ehr_A 135 QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACA-SLLKKKQGT-DAVRTLSNAED 206 (222)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHH-HHHC-----------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHH-HHHHHHhcc-chhhhccchhh
Confidence 9999999999999999999999999999999999999999999999888766 677777766 66666666544
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=1.2e-24 Score=169.65 Aligned_cols=136 Identities=22% Similarity=0.227 Sum_probs=113.9
Q ss_pred CCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCC
Q psy17862 50 KNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD 129 (265)
Q Consensus 50 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~ 129 (265)
.+.|+||+|+..|+.++|++|++. +.+++.+|..|.||||+| +..|+.+++++|+...+.+++..+
T Consensus 72 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-------------~~~~~~~~v~~Ll~~~g~~~~~~d 137 (222)
T 3ehr_A 72 SIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWA-------------CHGGHKDIVEMLFTQPNIELNQQN 137 (222)
T ss_dssp EESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHH-------------HHTTCHHHHHHHTTSTTCCCCCCC
T ss_pred ccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHH-------------HHcCCHHHHHHHHcCCCCCccccC
Confidence 457999999999999999999997 889999999999999999 678999999999996689999999
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCC
Q psy17862 130 KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGL 199 (265)
Q Consensus 130 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 199 (265)
..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..+..++++.|+..|+.....+..++
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 9999999999999999999999999999999999999999999999999999999999998877766543
No 100
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=1.4e-23 Score=148.47 Aligned_cols=112 Identities=26% Similarity=0.326 Sum_probs=103.6
Q ss_pred CCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy17862 82 DKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT 161 (265)
Q Consensus 82 d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 161 (265)
+..|.||||+| +..|+.++++.|++ .+.+++..+..|.||||+|+..++.+++++|+++|++++.+
T Consensus 4 ~~~~~~~l~~A-------------~~~~~~~~v~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~ 69 (123)
T 3aaa_C 4 GSMCDKEFMWA-------------LKNGDLDEVKDYVA-KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAP 69 (123)
T ss_dssp ---CHHHHHHH-------------HHTTCHHHHHHHHH-TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCC
T ss_pred ccccchHHHHH-------------HHcCCHHHHHHHHH-cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcC
Confidence 45678899999 77899999999999 57788999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHh
Q psy17862 162 TIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAAS 207 (265)
Q Consensus 162 ~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~ 207 (265)
+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|..
T Consensus 70 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 70 DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 9999999999999999999999999999999999999999999943
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=6.3e-24 Score=168.03 Aligned_cols=139 Identities=26% Similarity=0.319 Sum_probs=125.1
Q ss_pred CCCcccHHHHHhcCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 49 DKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 49 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
..+.||||+|+..|+.++|+.|+. +.+++.+|..|.||||+| +..|+.+++++|+. .|.+++..
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~d~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~ga~~~~~ 106 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE--DRDVDAVDENGRTALLFV-------------AGLGSDKCVRLLAE-AGADLDHR 106 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT--TCCTTCBCTTSCBHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCC
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc--CCCCCCcCCCCCCHHHHH-------------HHCCCHHHHHHHHH-cCCCCCcC
Confidence 457899999999999999999998 789999999999999999 67899999999999 58888888
Q ss_pred C-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHh
Q psy17862 129 D-KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAAS 207 (265)
Q Consensus 129 ~-~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~ 207 (265)
+ ..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+ ....+.|||++|+.
T Consensus 107 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~-----------------~~~~~~~~l~~a~~ 169 (244)
T 3ui2_A 107 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL-----------------KTTPKGNPMQFGRR 169 (244)
T ss_dssp CSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHH-----------------TTCCCSSHHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHH-----------------hccCCCCHHHHHHH
Confidence 7 78999999999999999999999999999999999999999997522 13568999999999
Q ss_pred CCChHHHHHHHhhC
Q psy17862 208 HSHSRDVLMILLSH 221 (265)
Q Consensus 208 ~~~~~~~~~~L~~~ 221 (265)
.|+. +++++|...
T Consensus 170 ~g~~-~iv~~L~~~ 182 (244)
T 3ui2_A 170 IGLE-KVINVLEGQ 182 (244)
T ss_dssp HHHH-HHHHHHHHH
T ss_pred cChH-HHHHHHHHh
Confidence 9887 688888764
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=3e-25 Score=185.51 Aligned_cols=173 Identities=16% Similarity=0.097 Sum_probs=138.8
Q ss_pred ccHHHHHh-cCChHHHHHhhccCCCccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCC--cccCC
Q psy17862 53 RNILEAAE-HNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTL--VDAVD 129 (265)
Q Consensus 53 ~~l~~A~~-~g~~~~v~~ll~~~~~~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~--~~~~~ 129 (265)
+.+++|.. .++.+.+++++.. +. ++.||||+| +..|+.+++++|++.+... .+..+
T Consensus 67 l~~~~a~~~~~~~~~~~~l~~~-g~-------~~~T~Lh~A-------------a~~G~~e~v~~Ll~~ga~~~~~~~~~ 125 (376)
T 2aja_A 67 LCLYYAHYNRNAKQLWSDAHKK-GI-------KSEVICFVA-------------AITGCSSALDTLCLLLTSDEIVKVIQ 125 (376)
T ss_dssp HHHHHHHTTTTCTTHHHHHHHH-TC-------CHHHHHHHH-------------HHHCCHHHHHHHTTC--CCSSCC--C
T ss_pred HHHHHHHhcCCCHHHHHHHHHc-CC-------CcCCHHHHH-------------HHcCCHHHHHHHHHcCCcHHHHHHhc
Confidence 34555655 4778888888876 33 346999999 7799999999999854311 12345
Q ss_pred CCCChHHHHHHHcCCHHHHHHHHHcCCCC---CCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccc--cCCCCCcHHHH
Q psy17862 130 KDGYSPLHRACYNGHANIVELLIQWGADT---QKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNA--QTNGGLTPLHL 204 (265)
Q Consensus 130 ~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~---~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~--~~~~g~tpL~~ 204 (265)
..|.||||+|+..|+.+++++|+++|+++ +..+.. .||||+|+..|+.+++++|+++|++++. .|..|.||||+
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~ 204 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRW 204 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHH
Confidence 56889999999999999999999999752 222223 8999999999999999999999999887 88889999999
Q ss_pred HH-hCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhh
Q psy17862 205 AA-SHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPC 256 (265)
Q Consensus 205 a~-~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 256 (265)
|+ ..|+. +++++|+++ |. .|.|||++|+..|+.+.+..|++..
T Consensus 205 Aa~~~G~~-eiv~~Ll~~-ga-------~~~taL~~Aa~~g~~evv~lL~~~g 248 (376)
T 2aja_A 205 AAVGRGHH-NVINFLLDC-PV-------MLAYAEIHEFEYGEKYVNPFIARHV 248 (376)
T ss_dssp HHSTTCCH-HHHHHHTTS-HH-------HHHHHHHCTTTTTTTTHHHHHHHHH
T ss_pred HHHHCCCH-HHHHHHHhC-CC-------ccchHHHHHHHCCCHHHHHHHHhcC
Confidence 99 99998 799999886 42 3899999999999988777777653
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=5.2e-22 Score=159.89 Aligned_cols=121 Identities=21% Similarity=0.131 Sum_probs=72.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHcCCCC------CCCCCCCChHHHHHHhc---CCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy17862 134 SPLHRACYNGHANIVELLIQWGADT------QKTTIDGWTPLHSACKW---NNTECVIVLLNYGVDVNAQTNGGLTPLHL 204 (265)
Q Consensus 134 t~l~~a~~~~~~~~~~~Ll~~~~~~------~~~~~~g~t~l~~a~~~---~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~ 204 (265)
++|+.|+..++.+.++.+++.|+++ +..+..|.||||+|+.. ++.+++++|+++|++++.+|..|+||||+
T Consensus 132 ~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~ 211 (278)
T 1dcq_A 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHY 211 (278)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHH
T ss_pred hhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHH
Confidence 4566666666666666666666552 23355566666666666 56666666666666666666666666666
Q ss_pred HHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhh
Q psy17862 205 AASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPC 256 (265)
Q Consensus 205 a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~ 256 (265)
|+..|+. +++++|+++ |++++.+|..|.||||+|+..|+.+.+..|++..
T Consensus 212 A~~~g~~-~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g 261 (278)
T 1dcq_A 212 CCLTDNA-ECLKLLLRG-KASIEIANESGETPLDIAKRLKHEHCEELLTQAL 261 (278)
T ss_dssp HHHTTCH-HHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHcCCH-HHHHHHHHc-CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 6666655 455555554 5666666666666666666666555555555443
No 104
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=4.3e-22 Score=173.03 Aligned_cols=134 Identities=19% Similarity=0.240 Sum_probs=113.8
Q ss_pred hHHHHHHhhCCHHHHHHHHhcCCCCcccC------CCCCChHHHHHHH---cCCHHHHHHHHHcCCCCCCCCCCCChHHH
Q psy17862 100 RKILEAAEHNDSKTLEALLDLDSTLVDAV------DKDGYSPLHRACY---NGHANIVELLIQWGADTQKTTIDGWTPLH 170 (265)
Q Consensus 100 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 170 (265)
..++.|+..|+.+.++.|+. .|.+++.. +..|.||||+||. .|+.+++++|+++|+++|..|..|.||||
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~-~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh 212 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFA-NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALH 212 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHH-TTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHH
T ss_pred HHHHHHHhccCHHHHHHHHh-hcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHH
Confidence 45777799999999999999 46787766 8899999999977 89999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCCCCCCcccCCCCccHHHHHhh
Q psy17862 171 SACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATR 242 (265)
Q Consensus 171 ~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l~~a~~ 242 (265)
+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+. +++++|+++ |++++. ||+|++..
T Consensus 213 ~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-~~~~~Ll~~-ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 213 YAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHK-ECEELLEQA-QAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCH-HHHHHHHHT-CC------------------
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCH-HHHHHHHHh-CCCCCC------Ccceeecc
Confidence 99999999999999999999999999999999999999998 789999987 888876 46665543
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.88 E-value=2.1e-22 Score=175.01 Aligned_cols=137 Identities=21% Similarity=0.202 Sum_probs=117.3
Q ss_pred ccHHHHHhcCChHHHHHhhccCCCccccC------CCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcc
Q psy17862 53 RNILEAAEHNDSKTLEALLDHDSTLVDAV------DKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVD 126 (265)
Q Consensus 53 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~------d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~ 126 (265)
+.|+.|+..|+.+.|+.|+.. |++++.. |..|.||||+||.. +..|+.+++++|+. .|++++
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~----------a~~g~~~~v~~Ll~-~ga~vn 201 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKV----------ANQASLPLVDFIIQ-NGGHLD 201 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHT----------CCTTTHHHHHHHHH-HSCCTT
T ss_pred HHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHh----------cccccHHHHHHHHH-cCCCCC
Confidence 679999999999999999998 7899877 88999999999552 22789999999999 578999
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy17862 127 AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAA 206 (265)
Q Consensus 127 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~ 206 (265)
..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++. +|+|.+.
T Consensus 202 ~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~------~~~h~~~ 275 (497)
T 3lvq_E 202 AKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA------FPLHVDY 275 (497)
T ss_dssp CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-----------------
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC------Ccceeec
Confidence 9999999999999999999999999999999999999999999999999999999999999999876 4666544
Q ss_pred h
Q psy17862 207 S 207 (265)
Q Consensus 207 ~ 207 (265)
.
T Consensus 276 ~ 276 (497)
T 3lvq_E 276 S 276 (497)
T ss_dssp -
T ss_pred c
Confidence 3
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=2.2e-22 Score=167.66 Aligned_cols=137 Identities=23% Similarity=0.323 Sum_probs=106.8
Q ss_pred Hhh-CCHHHHHHHHhcCCCCcccCC--CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHH
Q psy17862 106 AEH-NDSKTLEALLDLDSTLVDAVD--KDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVI 182 (265)
Q Consensus 106 ~~~-~~~~~~~~ll~~~~~~~~~~~--~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~ 182 (265)
+.. ++.++++.|+. .|.+++..+ ..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.++++
T Consensus 207 a~~~g~~~~v~~LL~-~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~ 285 (368)
T 3jue_A 207 SGHPPSLPTMADALA-HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLAC 285 (368)
T ss_dssp TSSSCCHHHHHHHHH-TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHccCCHHHHHHHHH-cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHH
Confidence 778 99999999998 678888887 88999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCccccCCCCCcHHHHHHhCCChHHHHHHHhhCC--CCCCcccCCCCccHHHHHhhcC
Q psy17862 183 VLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHP--NVDPHILSTSNESAREIATRSG 244 (265)
Q Consensus 183 ~Ll~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L~~~~--~~~~~~~~~~g~t~l~~a~~~~ 244 (265)
+|+++|++++.+|..|.||||+|+..|+. +++++|+... +.+....+..+.|+++++....
T Consensus 286 ~LL~~Gad~~~~d~~G~TpL~~A~~~g~~-~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 286 LFLKRGADLGARDSEGRDPLTIAMETANA-DIVTLLRLAKMREAEAAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp HHHHTTCCTTCCCTTSCCHHHHHHHTTCH-HHHHHHHHHHC-----------------------
T ss_pred HHHHCcCCCCCcCCCCCCHHHHHHHCCCH-HHHHHHHHcCCCcccccccCCCCCCHHHHHHHHH
Confidence 99999999999999999999999999998 6777777542 2334456678889999886654
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=6.2e-22 Score=132.84 Aligned_cols=92 Identities=45% Similarity=0.689 Sum_probs=83.0
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHHhCCC
Q psy17862 131 DGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSH 210 (265)
Q Consensus 131 ~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~~~~~ 210 (265)
+|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHHHHHhhCCCC
Q psy17862 211 SRDVLMILLSHPNV 224 (265)
Q Consensus 211 ~~~~~~~L~~~~~~ 224 (265)
. +++++|++. |+
T Consensus 81 ~-~~~~~Ll~~-ga 92 (93)
T 1n0q_A 81 L-EVVKLLLEA-GA 92 (93)
T ss_dssp H-HHHHHHHHT-TC
T ss_pred H-HHHHHHHHc-CC
Confidence 7 788888876 54
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.88 E-value=1.6e-22 Score=141.16 Aligned_cols=109 Identities=39% Similarity=0.527 Sum_probs=101.5
Q ss_pred cCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHHHH
Q psy17862 127 AVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAA 206 (265)
Q Consensus 127 ~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~a~ 206 (265)
.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCChHHHHHHHhhCCCCCCcccCCCCccHH
Q psy17862 207 SHSHSRDVLMILLSHPNVDPHILSTSNESAR 237 (265)
Q Consensus 207 ~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~l 237 (265)
..++. +++++|+++ |++++.++..|.||-
T Consensus 84 ~~~~~-~~~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 84 KNGHH-EIVKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp TTTCH-HHHHHHHTT-SSSHHHHSCCCC---
T ss_pred HCCCH-HHHHHHHHc-CCCCCcCCccccccc
Confidence 99988 788999987 899999999999884
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=5.8e-22 Score=165.08 Aligned_cols=143 Identities=27% Similarity=0.349 Sum_probs=115.7
Q ss_pred cccHHHHHhc-CChHHHHHhhccCCCccccCC--CCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccC
Q psy17862 52 KRNILEAAEH-NDSKTLEALLDHDSTLVDAVD--KDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAV 128 (265)
Q Consensus 52 ~~~l~~A~~~-g~~~~v~~ll~~~~~~~~~~d--~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~ 128 (265)
.++||.|+.. |+.++++.|++. |++++..+ ..|.||||+| +..++.+++++|+. .|++++..
T Consensus 200 ~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~A-------------a~~g~~~iv~~LL~-~Gadvn~~ 264 (368)
T 3jue_A 200 GALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQA-------------TAANSLLACEFLLQ-NGANVNQA 264 (368)
T ss_dssp HHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHH-------------HHTTCHHHHHHHHH-TTCCTTCC
T ss_pred CcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHH-------------HHCCCHHHHHHHHH-cCCCCCCC
Confidence 4689999999 999999999987 89999988 8899999999 66899999999999 58899999
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcC---CCccccCCCCCcHHHHH
Q psy17862 129 DKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYG---VDVNAQTNGGLTPLHLA 205 (265)
Q Consensus 129 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g---~~~~~~~~~g~tpL~~a 205 (265)
|..|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.+++++|+..+ .+....+..+.|+++++
T Consensus 265 d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 265 DSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344 (368)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999876 33344556678888877
Q ss_pred HhCC
Q psy17862 206 ASHS 209 (265)
Q Consensus 206 ~~~~ 209 (265)
....
T Consensus 345 ~~~~ 348 (368)
T 3jue_A 345 RDFS 348 (368)
T ss_dssp ----
T ss_pred HHHH
Confidence 6653
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.87 E-value=2.3e-21 Score=156.08 Aligned_cols=127 Identities=20% Similarity=0.226 Sum_probs=99.8
Q ss_pred cccHHHHHhcCChHHHHHhhccCCCc------cccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCc
Q psy17862 52 KRNILEAAEHNDSKTLEALLDHDSTL------VDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLV 125 (265)
Q Consensus 52 ~~~l~~A~~~g~~~~v~~ll~~~~~~------~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~ 125 (265)
.++|+.|+..|+.+.++.++.. |.+ ++..|..|.||||+|+..+. .++.+++++|+. .|.++
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~----------~~~~~~v~~Ll~-~ga~i 198 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVD----------RTSLHIVDFLVQ-NSGNL 198 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCC----------TTTHHHHHHHHH-HCSCT
T ss_pred hhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcc----------cchHHHHHHHHH-CCCCc
Confidence 3678899999999999999887 666 34447778888888843211 177888888887 47778
Q ss_pred ccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCC
Q psy17862 126 DAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVD 190 (265)
Q Consensus 126 ~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~ 190 (265)
+..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 199 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 199 DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 88888888888888888888888888888888888888888888888888888888888887764
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=3.1e-21 Score=129.38 Aligned_cols=93 Identities=40% Similarity=0.603 Sum_probs=87.0
Q ss_pred CCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy17862 84 DGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI 163 (265)
Q Consensus 84 ~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~ 163 (265)
+|+||||+| +..|+.+++++|++ .+.+++.++..|.||||+|+..|+.+++++|+++|++++.++.
T Consensus 1 ~g~t~L~~A-------------~~~~~~~~v~~Ll~-~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 66 (93)
T 1n0q_A 1 NGRTPLHLA-------------ARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (93)
T ss_dssp --CCHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcHHHHH-------------HHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 478999999 67899999999998 5889999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHhcCCHHHHHHHHhcCCC
Q psy17862 164 DGWTPLHSACKWNNTECVIVLLNYGVD 190 (265)
Q Consensus 164 ~g~t~l~~a~~~~~~~~v~~Ll~~g~~ 190 (265)
.|.||||+|+..++.+++++|+++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999875
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.86 E-value=6.6e-22 Score=138.02 Aligned_cols=109 Identities=42% Similarity=0.537 Sum_probs=101.1
Q ss_pred cCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Q psy17862 80 AVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQ 159 (265)
Q Consensus 80 ~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~ 159 (265)
.+|.+|.||||+| +..++.+++++|+. .+.+++..+..|.||||+|+..++.+++++|+++|++++
T Consensus 4 ~~d~~g~t~L~~A-------------~~~~~~~~~~~Ll~-~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 69 (115)
T 2l6b_A 4 WGSKDGNTPLHNA-------------AKNGHAEEVKKLLS-KGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69 (115)
T ss_dssp CCSCSSCCHHHHH-------------HHHTCHHHHHHHTT-TTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT
T ss_pred ccCCCCCCHHHHH-------------HHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 5688999999999 67899999999998 578899999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHH
Q psy17862 160 KTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPL 202 (265)
Q Consensus 160 ~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL 202 (265)
.++..|.||||+|+..++.+++++|+++|++++.++..|.+|-
T Consensus 70 ~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 70 ARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112 (115)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence 9999999999999999999999999999999999999999873
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.80 E-value=3.1e-19 Score=123.42 Aligned_cols=93 Identities=31% Similarity=0.384 Sum_probs=77.6
Q ss_pred cccCCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHHhcCCCccccCCCCCcHHHH
Q psy17862 125 VDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHL 204 (265)
Q Consensus 125 ~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpL~~ 204 (265)
....+..|.|+||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.+++++|+++|++++.+|..|.||||+
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~ 96 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI 96 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence 33456788899999999999999999999998888888889999999999999999999999999998888889999999
Q ss_pred HHhCCChHHHHHHH
Q psy17862 205 AASHSHSRDVLMIL 218 (265)
Q Consensus 205 a~~~~~~~~~~~~L 218 (265)
|+..|+. +++++|
T Consensus 97 A~~~~~~-~~~~~L 109 (110)
T 2zgd_A 97 SIDNGNE-DLAEIL 109 (110)
T ss_dssp HHHHTCH-HHHHHH
T ss_pred HHHcCCH-HHHHHh
Confidence 9988887 666665
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=6e-18 Score=116.90 Aligned_cols=94 Identities=29% Similarity=0.346 Sum_probs=83.9
Q ss_pred ccccCCCCCCcHHHHHHHcCcCchHHHHHHhhCCHHHHHHHHhcCCCCcccCCCCCChHHHHHHHcCCHHHHHHHHHcCC
Q psy17862 77 LVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGA 156 (265)
Q Consensus 77 ~~~~~d~~g~tpl~~A~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~ 156 (265)
.+...|.+|.||||+| +..|+.+++++|+. .+.+++..|..|.||||+|+..|+.+++++|+++|+
T Consensus 16 ~~~~~~~~g~t~L~~A-------------~~~g~~~~v~~Ll~-~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga 81 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEA-------------ARAGQDDEVRILMA-NGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGA 81 (110)
T ss_dssp ------CCHHHHHHHH-------------HHHTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cccccCCccchHHHHH-------------HHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 3456678899999999 77899999999998 578899999999999999999999999999999999
Q ss_pred CCCCCCCCCChHHHHHHhcCCHHHHHHH
Q psy17862 157 DTQKTTIDGWTPLHSACKWNNTECVIVL 184 (265)
Q Consensus 157 ~~~~~~~~g~t~l~~a~~~~~~~~v~~L 184 (265)
+++.++..|.||||+|+..++.+++++|
T Consensus 82 ~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 82 DVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred CccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999999999987
No 115
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=40.12 E-value=28 Score=15.64 Aligned_cols=18 Identities=33% Similarity=0.687 Sum_probs=12.7
Q ss_pred hhhHHHHHHHHHHHHhhc
Q psy17862 6 DSNELTEKMQQLQESIRD 23 (265)
Q Consensus 6 ~~~~~~~~~~~l~~~~~~ 23 (265)
+.+++.++++.+++.++.
T Consensus 2 nadelykeledlqerlrk 19 (27)
T 3twe_A 2 NADELYKELEDLQERLRK 19 (27)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHH
Confidence 456777788888777664
No 116
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=39.86 E-value=8.6 Score=32.96 Aligned_cols=105 Identities=9% Similarity=0.042 Sum_probs=57.6
Q ss_pred HHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHH----HhcCCCccccCCCCCcHHHHHHhCCChHHHHHHH---
Q psy17862 146 NIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVL----LNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMIL--- 218 (265)
Q Consensus 146 ~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~L----l~~g~~~~~~~~~g~tpL~~a~~~~~~~~~~~~L--- 218 (265)
++++.+.+.|..++.. .-.+.+...+..|..+-+..+ .+.|..++.... .+.|...+..|..+...+++
T Consensus 91 ~lf~~M~~~G~~Pd~~--tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M 166 (501)
T 4g26_A 91 DIFKQMIVDKVVPNEA--TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHM 166 (501)
T ss_dssp HHHHHHHHTTCCCCHH--HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCHH--HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHH
Confidence 4555666667665432 123445566677776554333 345665544332 23445557777776555444
Q ss_pred hhCCCCCCcccCCCCccHHHHHhhcCCchhhhhcchhhh
Q psy17862 219 LSHPNVDPHILSTSNESAREIATRSGIHYGLFETIEPCF 257 (265)
Q Consensus 219 ~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ll~~~~ 257 (265)
.+. |+.|+... -.+.+...++.|..+.+..++++..
T Consensus 167 ~~~-G~~Pd~~t--y~~Li~~~~~~g~~d~A~~ll~~Mr 202 (501)
T 4g26_A 167 VES-EVVPEEPE--LAALLKVSMDTKNADKVYKTLQRLR 202 (501)
T ss_dssp HHT-TCCCCHHH--HHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred Hhc-CCCCCHHH--HHHHHHHHhhCCCHHHHHHHHHHHH
Confidence 333 55554433 2244556677787777777776643
No 117
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=29.62 E-value=43 Score=17.22 Aligned_cols=19 Identities=26% Similarity=0.251 Sum_probs=15.0
Q ss_pred cHHHHHhcCChHHHHHhhc
Q psy17862 54 NILEAAEHNDSKTLEALLD 72 (265)
Q Consensus 54 ~l~~A~~~g~~~~v~~ll~ 72 (265)
.+..|+..|+.+.++.|-.
T Consensus 16 qiyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 16 QMDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHH
Confidence 4667889999999888754
No 118
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=25.68 E-value=53 Score=18.51 Aligned_cols=26 Identities=19% Similarity=0.443 Sum_probs=16.8
Q ss_pred CCcchhhhHHHHHHHHHHHHhhcCce
Q psy17862 1 MSDDEDSNELTEKMQQLQESIRDGSF 26 (265)
Q Consensus 1 ~~~~~~~~~~~~~~~~l~~~~~~~~~ 26 (265)
|+++...+....-+.-|.+||++|--
T Consensus 1 Mkd~lt~eq~~aILkaLdeaIe~GPW 26 (57)
T 3fxd_A 1 MKDQLSDEQKETILKALNDAIEKGPW 26 (57)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHSCT
T ss_pred CcchhhHHHHHHHHHHHHHHHHcCCc
Confidence 66666666666777788889988863
No 119
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=22.09 E-value=1.6e+02 Score=21.09 Aligned_cols=44 Identities=16% Similarity=0.137 Sum_probs=22.3
Q ss_pred hHHHHHHHcCCH-HHHHHHHHcCCCCCCCCCCCChHHHHHHhcCCHHHHHHHH
Q psy17862 134 SPLHRACYNGHA-NIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLL 185 (265)
Q Consensus 134 t~l~~a~~~~~~-~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~v~~Ll 185 (265)
..++.+...|++ +++++|.+.|--+ -+...|..++..++++-++
T Consensus 94 ~af~~~l~lGdv~~~i~lL~~~~r~~--------eA~~~A~t~g~~~~a~~~~ 138 (177)
T 3mkq_B 94 SMLLNTFYNNSTKERSSIFAEGGSLP--------LAYAVAKANGDEAAASAFL 138 (177)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHTTCHH--------HHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHCCChH--------HHHHHHHHcCcHHHHHHHH
Confidence 355555555654 3556665532210 2344555566666665554
No 120
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=20.31 E-value=2.8e+02 Score=23.10 Aligned_cols=17 Identities=18% Similarity=0.145 Sum_probs=12.3
Q ss_pred hhCCHHHHHHHHhcCCC
Q psy17862 107 EHNDSKTLEALLDLDST 123 (265)
Q Consensus 107 ~~~~~~~~~~ll~~~~~ 123 (265)
..|+...|+..+..+|.
T Consensus 31 ~e~~~~~ve~y~~~gg~ 47 (454)
T 3zrh_A 31 VEGDLAAIEAYKSSGGD 47 (454)
T ss_dssp HHTCHHHHHHHHTTTCC
T ss_pred HcCChhHHHHHHhcCCc
Confidence 56788888888876554
Done!