RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy17862
(265 letters)
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can
range from 2 to over 20 (ankyrins, for example). ANK
repeats may occur in combinations with other types of
domains. The structural repeat unit contains two
antiparallel helices and a beta-hairpin, repeats are
stacked in a superhelical arrangement; this alignment
contains 4 consecutive repeats.
Length = 126
Score = 119 bits (300), Expect = 5e-34
Identities = 57/141 (40%), Positives = 80/141 (56%), Gaps = 15/141 (10%)
Query: 79 DAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHR 138
+A D+DG +PLH A + + ++ LL+ + V+A D DG +PLH
Sbjct: 1 NARDEDGRTPLHLAA-------------SNGHLEVVKLLLENGAD-VNAKDNDGRTPLHL 46
Query: 139 ACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGG 198
A NGH IV+LL++ GAD DG TPLH A + N + V +LL +G DVNA+ G
Sbjct: 47 AAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDG 106
Query: 199 LTPLHLAASHSHSRDVLMILL 219
TPLHLAA + H +V+ +LL
Sbjct: 107 RTPLHLAAKNGH-LEVVKLLL 126
Score = 105 bits (263), Expect = 1e-28
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 2/119 (1%)
Query: 126 DAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLL 185
+A D+DG +PLH A NGH +V+LL++ GAD DG TPLH A K + E V +LL
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60
Query: 186 NYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSG 244
G DVNA+ G TPLHLAA + + DV+ +LL H D + + +A ++G
Sbjct: 61 EKGADVNARDKDGNTPLHLAARNGNL-DVVKLLLKH-GADVNARDKDGRTPLHLAAKNG 117
Score = 96.3 bits (240), Expect = 3e-25
Identities = 50/141 (35%), Positives = 77/141 (54%), Gaps = 16/141 (11%)
Query: 46 NPQDKNKRNIL-EAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILE 104
N +D++ R L AA + + ++ LL++ + V+A D DG +PLH A N
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGAD-VNAKDNDGRTPLHLAAKN--------- 50
Query: 105 AAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTID 164
+ ++ LL+ + V+A DKDG +PLH A NG+ ++V+LL++ GAD D
Sbjct: 51 ----GHLEIVKLLLEKGAD-VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKD 105
Query: 165 GWTPLHSACKWNNTECVIVLL 185
G TPLH A K + E V +LL
Sbjct: 106 GRTPLHLAAKNGHLEVVKLLL 126
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies).
Length = 91
Score = 83.8 bits (208), Expect = 6e-21
Identities = 36/86 (41%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 136 LHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQT 195
LH A NG+ +V+LL++ GAD D T LH A + N E V +LL +G DVNA+
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADV--NLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58
Query: 196 NGGLTPLHLAASHSHSRDVLMILLSH 221
G T LHLAA + + +++ +LL H
Sbjct: 59 KDGNTALHLAARNGN-LEIVKLLLEH 83
Score = 82.3 bits (204), Expect = 3e-20
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
Query: 102 ILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT 161
+ AA++ + + ++ LL+ + V+ D D + LH A NG+ IV+LL++ GAD
Sbjct: 1 LHLAAKNGNLELVKLLLEKGAD-VNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 162 TIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQ 194
DG T LH A + N E V +LL +G D+N +
Sbjct: 58 DKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90
Score = 35.7 bits (83), Expect = 0.003
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 41 IEDSRNPQDKNKRNIL-EAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYN 95
+E + + L AA + + + ++ LL+H + V+A DKDG + LH A N
Sbjct: 17 LEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGAD-VNAKDKDGNTALHLAARN 71
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional.
Length = 422
Score = 77.4 bits (191), Expect = 2e-16
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 62 NDSKTLEALLDHDSTLVDAVDKDGYSPLH---RACYNDKNKRKILEAAEHN---DSKT-L 114
N +E LLD+ + V+ + DG + LH + D K+L + ++K +
Sbjct: 119 NSYSIVEYLLDNGAN-VNIKNSDGENLLHLYLESNKIDLKILKLL--IDKGVDINAKNRV 175
Query: 115 EALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACK 174
LL ++ D G++PLH A YN + V+ L+ GA+ G TPLH A
Sbjct: 176 NYLLSYGV-PINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAIL 234
Query: 175 WNNTECVIVLLNYGVDVNA 193
NN E +LLN G +
Sbjct: 235 NNNKEIFKLLLNNGPSIKT 253
Score = 77.4 bits (191), Expect = 3e-16
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 30/183 (16%)
Query: 62 NDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLD 121
D K + LL V+A D +G +PL A N I+E N +
Sbjct: 83 TDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGAN--------- 133
Query: 122 STLVDAVDKDGYSPLHRACYNGHA--NIVELLIQWGAD-TQKTTID-------------- 164
V+ + DG + LH + I++LLI G D K ++
Sbjct: 134 ---VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDV 190
Query: 165 -GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPN 223
G+TPLH A NN E V LL+ G + N G TPLH+A +++ ++L + P+
Sbjct: 191 YGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250
Query: 224 VDP 226
+
Sbjct: 251 IKT 253
Score = 53.5 bits (129), Expect = 3e-08
Identities = 37/127 (29%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 124 LVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKW-----NNT 178
L D K PL+ A + ++V++L+ GAD +T + TPLH +
Sbjct: 27 LNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVK 86
Query: 179 ECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMI-LLSHPNVDPHILSTSNESAR 237
E V +LL YG +VNA N G+TPL A S S ++ L + +I ++ E+
Sbjct: 87 EIVKLLLEYGANVNAPDNNGITPLLYAIS-KKSNSYSIVEYLLDNGANVNIKNSDGENLL 145
Query: 238 EIATRSG 244
+ S
Sbjct: 146 HLYLESN 152
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction
only].
Length = 235
Score = 68.3 bits (166), Expect = 1e-13
Identities = 49/198 (24%), Positives = 83/198 (41%), Gaps = 15/198 (7%)
Query: 36 DDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYN 95
D ++ D + + + + + L A + L VD+ +
Sbjct: 17 DLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRL- 75
Query: 96 DKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHAN-----IVEL 150
+ AA D K ++ LL + V+A D DG +PLH A NG+ + +L
Sbjct: 76 -----PLHSAASKGDDKIVKLLLASGAD-VNAKDADGDTPLHLAALNGNPPEGNIEVAKL 129
Query: 151 LIQWGADTQKTTI---DGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAAS 207
L++ GAD + DG TPLH A + + V +LL G D N++ + G+T L AA
Sbjct: 130 LLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAK 189
Query: 208 HSHSRDVLMILLSHPNVD 225
+ V ++L ++
Sbjct: 190 NGRIELVKLLLDKGLHLS 207
>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional.
Length = 477
Score = 66.8 bits (163), Expect = 1e-12
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 63 DSKTLEALLDHDSTLVDAVDKD-GYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLD 121
+++ + LL + + ++ D+ G + LH A E+ D + E LL
Sbjct: 146 EAEITKLLLSYGAD-INMKDRHKGNTALHYA-------------TENKDQRLTELLL-SY 190
Query: 122 STLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLH-SACKWNNTEC 180
V+ DK SPLH A + + IV +L++ GA T G TPLH S + +
Sbjct: 191 GANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDI 250
Query: 181 VIVLLNYGVDVNAQTN-GGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREI 239
+ +LL +GVDVNA++ GLT LH + S L +LL + D + L++ +
Sbjct: 251 LKLLLEHGVDVNAKSYILGLTALHSSI---KSERKLKLLLEY-GADINSLNSYKLTPLSS 306
Query: 240 A--TRSGIHYG 248
A I+ G
Sbjct: 307 AVKQYLCINIG 317
Score = 61.0 bits (148), Expect = 1e-10
Identities = 55/239 (23%), Positives = 88/239 (36%), Gaps = 54/239 (22%)
Query: 57 EAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRAC-----------YNDKNK------ 99
+A E + +++LL V+ D +PLH C NK
Sbjct: 43 QAVEARNLDVVKSLLTRGHN-VNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFYT 101
Query: 100 -RKILEAAEHNDSKTLEALL--------DLDSTLVDAVDKD------------------- 131
I +A + + + + +L +D +D KD
Sbjct: 102 LVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADIN 161
Query: 132 ------GYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLL 185
G + LH A N + ELL+ +GA+ +PLH A K N V +LL
Sbjct: 162 MKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILL 221
Query: 186 NYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILST-SNESAREIATRS 243
G +A+ G TPLH++ + D+L +LL H VD + S +A + +S
Sbjct: 222 ENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEH-GVDVNAKSYILGLTALHSSIKS 279
Score = 59.5 bits (144), Expect = 4e-10
Identities = 57/180 (31%), Positives = 91/180 (50%), Gaps = 21/180 (11%)
Query: 46 NPQDKNKRN--ILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKIL 103
N +D++K N + A E+ D + E LL + + V+ DK SPLH
Sbjct: 161 NMKDRHKGNTALHYATENKDQRLTELLLSYGAN-VNIPDKTNNSPLH------------- 206
Query: 104 EAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRAC-YNGHANIVELLIQWGADTQ-KT 161
A +H + + LL+ ++ DA DK G +PLH + Y +I++LL++ G D K+
Sbjct: 207 HAVKHYNKPIVHILLENGAS-TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKS 265
Query: 162 TIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSH 221
I G T LHS+ K + + +LL YG D+N+ + LTPL A ++ IL+S+
Sbjct: 266 YILGLTALHSSIK--SERKLKLLLEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISN 323
Score = 36.4 bits (84), Expect = 0.013
Identities = 16/41 (39%), Positives = 21/41 (51%)
Query: 168 PLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASH 208
PLH A + N + V LL G +VN + LTPLH+
Sbjct: 40 PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKE 80
Score = 31.4 bits (71), Expect = 0.52
Identities = 14/43 (32%), Positives = 22/43 (51%)
Query: 135 PLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNN 177
PLH+A + ++V+ L+ G + + TPLH CK N
Sbjct: 40 PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPN 82
>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional.
Length = 471
Score = 65.8 bits (161), Expect = 2e-12
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 40/218 (18%)
Query: 49 DKNKRNILEAA--------EHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKR 100
D++ I+EAA + + + LL + V+ + G +PLH
Sbjct: 4 DESVDIIMEAALYDYLLNASNVTVEEVRRLLAAGAD-VNFRGEYGKTPLH---------- 52
Query: 101 KILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHAN---IVELLIQWGAD 157
L + + LL+ + V+A ++ G++PLH Y +A +++LLI+ GAD
Sbjct: 53 LYLHYSSEKVKDIVRLLLEAGAD-VNAPERCGFTPLH--LYLYNATTLDVIKLLIKAGAD 109
Query: 158 TQKTTIDGWTPLHSAC--KWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVL 215
G TPLH N + + +LL G DVNA G+TPL
Sbjct: 110 VNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLA------------ 157
Query: 216 MILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETI 253
+LL N + +L ++ ++ L
Sbjct: 158 -VLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHH 194
Score = 56.2 bits (136), Expect = 4e-09
Identities = 50/210 (23%), Positives = 78/210 (37%), Gaps = 33/210 (15%)
Query: 46 NPQDKNKRNILEAAEHNDS---KTLEALLDHDSTLVDAVDKDGYSPLH------------ 90
N +DK R L + K + LL + V+A+D G +PL
Sbjct: 111 NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGAD-VNALDLYGMTPLAVLLKSRNANVEL 169
Query: 91 ---------RACYNDKNKRKILEA-AE--HNDSKTLEALLDLDSTLVDAVDKDGYSPLHR 138
D R +L + ++ + L+ A D G +PLH
Sbjct: 170 LRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCD-PAATDMLGNTPLHS 228
Query: 139 A---CYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQT 195
+ ++ LLI G G TPLH A +NN L+ G D+NA +
Sbjct: 229 MATGSSCKRSLVLPLLIA-GISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVS 287
Query: 196 NGGLTPLHLAASHSHSRDVLMILLSHPNVD 225
+ G TPL L +++ R V L +P+ +
Sbjct: 288 SDGNTPLSLMVRNNNGRAVRAALAKNPSAE 317
>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional.
Length = 413
Score = 65.4 bits (159), Expect = 3e-12
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 14/168 (8%)
Query: 58 AAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEAL 117
A + DS+ ++ L+ H + D D S LH +A E D K +E L
Sbjct: 42 AMKFRDSEAIKLLMKHG-AIPDVKYPDIESELH-------------DAVEEGDVKAVEEL 87
Query: 118 LDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNN 177
LDL D KDG +PLH A +I++LLI GAD D ++PLH A +
Sbjct: 88 LDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGD 147
Query: 178 TECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVD 225
+ + +L+++ ++ + G TPL +A + M+L S N+D
Sbjct: 148 IKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANID 195
Score = 55.8 bits (134), Expect = 6e-09
Identities = 47/175 (26%), Positives = 68/175 (38%), Gaps = 15/175 (8%)
Query: 57 EAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEA 116
+A E D K +E LLD D KDG +PLH A K L A D
Sbjct: 74 DAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADP----- 128
Query: 117 LLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWN 176
D+ +T D +SPLH A G +ELLI A G TPL A
Sbjct: 129 --DIPNT-------DKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKG 179
Query: 177 NTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILST 231
+ +LL+ G +++ G A ++ D++ + + D +I+
Sbjct: 180 DIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKR-GADCNIMFM 233
Score = 40.0 bits (93), Expect = 9e-04
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 131 DGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVD 190
DG SP+ A + ++LL++ GA D + LH A + + + V LL+ G
Sbjct: 34 DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKF 93
Query: 191 VN-AQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSG 244
+ G+TPLHL A+ D++ +L++ DP I +T S +A G
Sbjct: 94 ADDVFYKDGMTPLHL-ATILKKLDIMKLLIAR-GADPDIPNTDKFSPLHLAVMMG 146
Score = 35.7 bits (82), Expect = 0.022
Identities = 18/83 (21%), Positives = 35/83 (42%)
Query: 143 GHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPL 202
G +I L+ G + DG +P+ A K+ ++E + +L+ +G + + + L
Sbjct: 13 GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESEL 72
Query: 203 HLAASHSHSRDVLMILLSHPNVD 225
H A + V +L D
Sbjct: 73 HDAVEEGDVKAVEELLDLGKFAD 95
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies).
Length = 54
Score = 53.4 bits (129), Expect = 6e-10
Identities = 20/54 (37%), Positives = 27/54 (50%)
Query: 165 GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMIL 218
G T LH A E V LL GVD+N G T LH+AA + + + ++L
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 50.3 bits (121), Expect = 8e-09
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 132 GYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLL 185
G + LH+A +G +V+ L++ G D +T DG T LH A + N E + +LL
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 44.2 bits (105), Expect = 1e-06
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 102 ILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLI 152
+ +AA + ++ LL+ ++ D+DG + LH A NG+ +++LL+
Sbjct: 5 LHKAAISGRLELVKYLLEKGV-DINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 32.6 bits (75), Expect = 0.015
Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 55 ILEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYN 95
+ +AA + ++ LL+ ++ D+DG + LH A N
Sbjct: 5 LHKAAISGRLELVKYLLEKGV-DINRTDEDGNTALHIAAEN 44
Score = 25.3 bits (56), Expect = 6.6
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 198 GLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSG 244
G T LH AA +++ LL VD + +A IA +G
Sbjct: 1 GRTALHKAAISGR-LELVKYLLEKG-VDINRTDEDGNTALHIAAENG 45
>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional.
Length = 682
Score = 57.8 bits (139), Expect = 1e-09
Identities = 70/262 (26%), Positives = 117/262 (44%), Gaps = 40/262 (15%)
Query: 8 NELTEKMQQLQESIRDGSFNIGQVSAWDDDVVGIED--SRNPQDKNKRNILEAAEHNDSK 65
NE E M+ ++E I+ I ++ V +D P I AAE ++K
Sbjct: 140 NESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITP-------IHYAAERGNAK 192
Query: 66 TLEALLDHDSTLVDAVDKDGYSPLHRACYN----------------DKNKRKILEAAEHN 109
+ LL + + V+ + D S L A + +KN +L+A +
Sbjct: 193 MVNLLLSYGAD-VNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNE 251
Query: 110 DSKTLEALLDLDSTL-VDAVDKDGYSPLHRACYNGH-ANIVELLIQWGADTQKTTIDGWT 167
D +T +LL D+ V+++D +PLH A + +V L++ GAD I G T
Sbjct: 252 DLET--SLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGET 309
Query: 168 PLHSACKWN-NTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDP 226
PL+ K +TE + L+ G DVNA +TPLH A++ ++D+++ LL
Sbjct: 310 PLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLE------ 363
Query: 227 HILSTSNESAREIATRSGIHYG 248
+N +AR+ ++ IHY
Sbjct: 364 ---LGANVNARDYCDKTPIHYA 382
Score = 51.2 bits (122), Expect = 2e-07
Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 22/181 (12%)
Query: 49 DKNKRNI-------LEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRK 101
D N +NI L A D++ + L+ + V+A D+ +PLH+A D+NK
Sbjct: 299 DVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD-VNAADRLYITPLHQASTLDRNKDI 357
Query: 102 ILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKT 161
++ LL+L + V+A D +P+H A + I+ L+ +GAD +
Sbjct: 358 VI------------TLLELGAN-VNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEAL 404
Query: 162 TIDGWTPLHSA-CKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLS 220
+ T LH A C N V L++ G +VN++ TPLH A + DV+ +LL
Sbjct: 405 SQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLD 464
Query: 221 H 221
+
Sbjct: 465 N 465
Score = 51.2 bits (122), Expect = 2e-07
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 27/194 (13%)
Query: 36 DDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTL-VDAVDKDGYSPLHRACY 94
D + I D+R+ +KN ++L+A + D +T +LL +D+ V+++D +PLH A
Sbjct: 225 DTIKAIIDNRSNINKNDLSLLKAIRNEDLET--SLLLYDAGFSVNSIDDCKNTPLHHASQ 282
Query: 95 N---------------DKNKRKI-------LEAAEHNDSKTLEALLDLDSTLVDAVDKDG 132
D N + I L A D++ + L+ L + V+A D+
Sbjct: 283 APSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD-VNAADRLY 341
Query: 133 YSPLHRA-CYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDV 191
+PLH+A + + +IV L++ GA+ TP+H A NN + LL+YG D+
Sbjct: 342 ITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADI 401
Query: 192 NAQTNGGLTPLHLA 205
A + T LH A
Sbjct: 402 EALSQKIGTALHFA 415
Score = 40.0 bits (93), Expect = 0.001
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 94 YNDKNK-----RKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIV 148
Y+ N+ + I E + ++ E LL+ V+A D +P+H A G+A +V
Sbjct: 136 YDKINESIEYMKLIKERIQQDELLIAEMLLE-GGADVNAKDIYCITPIHYAAERGNAKMV 194
Query: 149 ELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVN 192
LL+ +GAD +D + L A N + + +++ ++N
Sbjct: 195 NLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNIN 238
>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies).
Length = 56
Score = 51.6 bits (124), Expect = 3e-09
Identities = 18/54 (33%), Positives = 27/54 (50%)
Query: 117 LLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLH 170
LL+ ++A D +G +PLH A G +V+ L++ G D DG T L
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALD 54
Score = 47.7 bits (114), Expect = 8e-08
Identities = 23/50 (46%), Positives = 28/50 (56%)
Query: 156 ADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLA 205
D T +G TPLH A K+ E V LL GVD+N + + GLT L LA
Sbjct: 7 IDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 39.3 bits (92), Expect = 8e-05
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 184 LLNYG-VDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIA 240
LL +G +D+NA G TPLHLAA + V +L P VD ++ + +A ++A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLL--KPGVDLNLRDSDGLTALDLA 56
Score = 33.9 bits (78), Expect = 0.007
Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 70 LLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVD 129
LL+H ++A D +G +PLH A + ++ LL L + D
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKY-------------GALELVQWLLKPGVDL-NLRD 46
Query: 130 KDGYSPLHRA 139
DG + L A
Sbjct: 47 SDGLTALDLA 56
>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional.
Length = 434
Score = 55.4 bits (133), Expect = 9e-09
Identities = 33/123 (26%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 95 NDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQW 154
+ + K + A + D ++++ L + + V+ D +G P+H A + +I++LL++
Sbjct: 121 DAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIAIKHNFFDIIKLLLEK 179
Query: 155 GADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDV 214
GA +G +PLH+A ++ + C+ +L+++G + + G TPLH A H+ S
Sbjct: 180 GAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNRSAIE 239
Query: 215 LMI 217
L+I
Sbjct: 240 LLI 242
Score = 54.2 bits (130), Expect = 2e-08
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 19/198 (9%)
Query: 46 NPQDKNKRNILE-AAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRKILE 104
N +D + L A + D ++++ L ++ + V+ D +G P+H A
Sbjct: 118 NIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-VNIEDDNGCYPIHIA------------ 164
Query: 105 AAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTID 164
+HN ++ LL+ + D +G SPLH A G ++LLI G +
Sbjct: 165 -IKHNFFDIIKLLLE-KGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKN 222
Query: 165 GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNV 224
G+TPLH+A N + I LL +N Q G TPLH A + D++ ILL H
Sbjct: 223 GFTPLHNAIIHNRS--AIELLINNASINDQDIDGSTPLHHAINPPCDIDIIDILLYH-KA 279
Query: 225 DPHILSTSNESAREIATR 242
D I E+ + A +
Sbjct: 280 DISIKDNKGENPIDTAFK 297
Score = 48.0 bits (114), Expect = 2e-06
Identities = 27/100 (27%), Positives = 49/100 (49%)
Query: 125 VDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVL 184
V+ D + + LH A G +++L ++GAD +G P+H A K N + + +L
Sbjct: 117 VNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLL 176
Query: 185 LNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNV 224
L G N + N G +PLH AA + + +++ ++
Sbjct: 177 LEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHI 216
Score = 39.9 bits (93), Expect = 8e-04
Identities = 39/147 (26%), Positives = 66/147 (44%), Gaps = 25/147 (17%)
Query: 96 DKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWG 155
D+ +++A D+K +E + + ++ ++ PL A G +I++LLI G
Sbjct: 33 DETTTPLIDAIRSGDAKIVELFIKHGAD-INHINTKIPHPLLTAIKIGAHDIIKLLIDNG 91
Query: 156 ADTQ------------KTTIDGW-----------TPLHSACKWNNTECVIVLLNYGVDVN 192
DT KT +D T LH A K + E + +L YG DVN
Sbjct: 92 VDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVN 151
Query: 193 AQTNGGLTPLHLAASHSHSRDVLMILL 219
+ + G P+H+A H+ D++ +LL
Sbjct: 152 IEDDNGCYPIHIAIKHN-FFDIIKLLL 177
>gnl|CDD|140343 PTZ00322, PTZ00322,
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase;
Provisional.
Length = 664
Score = 53.7 bits (129), Expect = 4e-08
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 142 NGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTP 201
+G A +L+ GAD DG TPLH AC + + V VLL +G D G TP
Sbjct: 92 SGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTP 151
Query: 202 LHLAASHSHSRDVLMILLSHPNVD 225
L LA + R+V+ +L H
Sbjct: 152 LELAE-ENGFREVVQLLSRHSQCH 174
Score = 52.6 bits (126), Expect = 7e-08
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 126 DAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLL 185
+ D DG +PLH AC NGH +V +L+++GAD DG TPL A + E V +L
Sbjct: 109 NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
Query: 186 NYGV-DVNAQTNG 197
+ N
Sbjct: 169 RHSQCHFELGANA 181
Score = 33.7 bits (77), Expect = 0.11
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 18/75 (24%)
Query: 79 DAVDKDGYSPLHRACYNDKNK--RKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPL 136
+ D DG +PLH AC N + R +LE D TL+D KDG +PL
Sbjct: 109 NCRDYDGRTPLHIACANGHVQVVRVLLE-------------FGADPTLLD---KDGKTPL 152
Query: 137 HRACYNGHANIVELL 151
A NG +V+LL
Sbjct: 153 ELAEENGFREVVQLL 167
>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities. Repeats 13-24 are especially active,
with known sites of interaction for the Na/K ATPase,
Cl/HCO(3) anion exchanger, voltage-gated sodium channel,
clathrin heavy chain and L1 family cell adhesion
molecules. The ANK repeats are found to form a
contiguous spiral stack such that ion transporters like
the anion exchanger associate in a large central cavity
formed by the ANK repeat spiral, while clathrin and cell
adhesion molecules associate with specific regions
outside this cavity.
Length = 33
Score = 47.5 bits (114), Expect = 6e-08
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 164 DGWTPLHSACKWNNTECVIVLLNYGVDVNAQTN 196
DG TPLH A + + E V +LL G DVNA+
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 42.5 bits (101), Expect = 4e-06
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 131 DGYSPLHRACYNGHANIVELLIQWGAD 157
DG +PLH A NGH +V+LL++ GAD
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGAD 27
Score = 30.2 bits (69), Expect = 0.090
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 198 GLTPLHLAASHSHSRDVLMILLSHPNVDPHI 228
G TPLHLAA + H +V+ +LL D +
Sbjct: 2 GNTPLHLAARNGH-LEVVKLLLEA-GADVNA 30
>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel
protein. The Transient Receptor Potential Ca2+ Channel
(TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also
been called the store-operated calcium channel (SOC)
family. The prototypical members include the Drosophila
retinal proteinsTRP and TRPL (Montell and Rubin, 1989;
Hardie and Minke, 1993). SOC members of the family
mediate the entry of extracellular Ca2+ into cells in
responseto depletion of intracellular Ca2+ stores
(Clapham, 1996) and agonist stimulated production of
inositol-1,4,5 trisphosphate (IP3). One member of the
TRP-CCfamily, mammalian Htrp3, has been shown to form a
tight complex with the IP3 receptor (TC #1.A.3.2.1).
This interaction is apparently required for IP3
tostimulate Ca2+ release via Htrp3. The vanilloid
receptor subtype 1 (VR1), which is the receptor for
capsaicin (the ?hot? ingredient in chili peppers) and
servesas a heat-activated ion channel in the pain
pathway (Caterina et al., 1997), is also a member of
this family. The stretch-inhibitable non-selective
cation channel(SIC) is identical to the vanilloid
receptor throughout all of its first 700 residues, but
it exhibits a different sequence in its last 100
residues. VR1 and SICtransport monovalent cations as
well as Ca2+. VR1 is about 10x more permeable to Ca2+
than to monovalent ions. Ca2+ overload probably causes
cell deathafter chronic exposure to capsaicin.
(McCleskey and Gold, 1999) [Transport and binding
proteins, Cations and iron carrying compounds].
Length = 743
Score = 48.5 bits (116), Expect = 2e-06
Identities = 34/180 (18%), Positives = 57/180 (31%), Gaps = 28/180 (15%)
Query: 84 DGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNG 143
+ L+ C + + + AA N++ L LL S G + LH
Sbjct: 38 EEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAV----GDTLLHAISLEY 93
Query: 144 HANIVELLIQWGADTQKTTIDGW--------------TPLHSACKWNNTECVIVLLNYGV 189
+ VE ++ + + T LH A N E V +LL G
Sbjct: 94 V-DAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGA 152
Query: 190 DVNAQTNGGL---TPLHLAASHSHSRDVLMILLSHPNV------DPHILSTSNESAREIA 240
V A+ G + + H S L P++ DP + T++ +
Sbjct: 153 SVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLL 212
Score = 33.9 bits (78), Expect = 0.095
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 29/134 (21%)
Query: 105 AAEHNDSKTLEALLDLDSTL------VDAVDKD-------GYSPLHRACYNGHANIVELL 151
AA + + ++ LL+ +++ V G SPL+ A G +IV LL
Sbjct: 135 AAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALL 194
Query: 152 IQWGADTQKTTIDGWTPLH-----SACKWNNTECVIVLLNYGVDVNAQT----------N 196
+ AD G T LH + K E + N+ + + + N
Sbjct: 195 SEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILN 254
Query: 197 G-GLTPLHLAASHS 209
GLTPL LAA
Sbjct: 255 HQGLTPLKLAAKEG 268
>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional.
Length = 489
Score = 46.8 bits (111), Expect = 6e-06
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 141 YNGHANIVELLIQWGADTQKTTIDGWTPLH---SACKWNNTECVIVLLNYGVDVNAQTNG 197
Y +IV++LI+ GAD K DG TPL+ S NN E ++ ++ G D
Sbjct: 85 YKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKD 144
Query: 198 GLTPLHLAASHSHSRDVLMI-LLSHPNVDPHILS 230
G T L + +H D+ +I LL VD + +
Sbjct: 145 GFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHN 178
Score = 31.3 bits (71), Expect = 0.48
Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 33/172 (19%)
Query: 56 LEAAEHNDSKTLEALLDHDSTLVDAVDKDGYSPLHRACYNDKNKRK-------------- 101
L++ H D + ++ LL+ + +K+ Y LH CY N +
Sbjct: 153 LQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLH--CYFKYNIDRIDADILKLFVDNGF 210
Query: 102 -ILEAAEHNDSKTLEALLDL-------DSTLVD---------AVDKDGYSPLHRACYNGH 144
I + + + K +E L L ++D VD+ G++PL+ + + +
Sbjct: 211 IINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSYIDINQVDELGFNPLYYSVSHNN 270
Query: 145 ANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTN 196
I E L+Q G D T G T L +A + + +LN + N +
Sbjct: 271 RKIFEYLLQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNTISY 322
Score = 31.0 bits (70), Expect = 0.60
Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 146 NIVELLIQWGADTQKTTIDGWTPLHSAC----KWNNT-ECVIVLLNYGVDVNAQTNGGLT 200
+IV+L I GA+ + TPL + + + + V +L+ G D+N + + G T
Sbjct: 52 DIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGET 111
Query: 201 PLH--LAASHSHSRDVLMILLSHPNVDPHILSTSNESAREIATRSGIH 246
PL+ L+ + ++ ++L+ ++ + D +L + ++ +S H
Sbjct: 112 PLYCLLSNGYINNLEILLFMIEN-GADTTLLDKDGFTMLQVYLQSNHH 158
>gnl|CDD|197603 smart00248, ANK, ankyrin repeats. Ankyrin repeats are about 33
amino acids long and occur in at least four consecutive
copies. They are involved in protein-protein
interactions. The core of the repeat seems to be an
helix-loop-helix structure.
Length = 30
Score = 41.0 bits (97), Expect = 1e-05
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 164 DGWTPLHSACKWNNTECVIVLLNYGVDVNA 193
DG TPLH A + N E V +LL+ G D+NA
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 34.5 bits (80), Expect = 0.002
Identities = 11/23 (47%), Positives = 16/23 (69%)
Query: 131 DGYSPLHRACYNGHANIVELLIQ 153
DG +PLH A NG+ +V+LL+
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLD 23
Score = 26.4 bits (59), Expect = 1.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 198 GLTPLHLAASHSHSRDVLMILLSHPNVDPHI 228
G TPLHLAA + + +V+ +LL D +
Sbjct: 2 GRTPLHLAAENGN-LEVVKLLLDK-GADINA 30
>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities.
Length = 30
Score = 39.5 bits (93), Expect = 4e-05
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 164 DGWTPLHSACKWNNTECVIVLLNYGVDVNA 193
DG TPLH A + N E V +LL +G D+NA
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 37.6 bits (88), Expect = 2e-04
Identities = 14/27 (51%), Positives = 20/27 (74%)
Query: 131 DGYSPLHRACYNGHANIVELLIQWGAD 157
DG +PLH A NG+ +V+LL++ GAD
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGAD 27
Score = 25.3 bits (56), Expect = 4.4
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 198 GLTPLHLAASHSHSRDVLMILLSHPNVD 225
G TPLHLAA + + V ++L +++
Sbjct: 2 GNTPLHLAARNGNLELVKLLLEHGADIN 29
>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional.
Length = 446
Score = 42.7 bits (100), Expect = 1e-04
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Query: 118 LDLDSTLVDAVDKDG-YSPLHRAC--YNGHANIVELLIQWGADTQKTTIDGWTPLHSACK 174
LD+ ++ A++ G Y LH C VE L+ G +T DG PLH A K
Sbjct: 22 LDVFRNMLQAIEPSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASK 81
Query: 175 WNNTECVIVLLNYGVDVNAQTNGGLTPLH 203
NN V +LL +G D NA TPL+
Sbjct: 82 INNNRIVAMLLTHGADPNACDKQHKTPLY 110
Score = 40.8 bits (95), Expect = 5e-04
Identities = 53/187 (28%), Positives = 80/187 (42%), Gaps = 25/187 (13%)
Query: 46 NPQDKNKRNILEAAEHNDSKTLEA---LLDHDSTLVDAVDKDGYSPLHRACYNDKNK--R 100
N DK + L D + +E L+ + + + ++VD++G PL AC + + +
Sbjct: 99 NACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPL-LACTDPSERVFK 157
Query: 101 KILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACY--NGHANIVELLIQWGADT 158
KI+ S EA + VDK G + +HR N A+ + +++ G
Sbjct: 158 KIM-------SIGFEARI---------VDKFGKNHIHRHLMSDNPKASTISWMMKLGISP 201
Query: 159 QKTTIDGWTPLHSAC-KWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMI 217
K DG TPLH C K +I LL DVN Q G +PL L ++
Sbjct: 202 SKPDHDGNTPLHIVCSKTVKNVDIINLLLPSTDVNKQNKFGDSPLTLLIKTLSPAHLINK 261
Query: 218 LLSHPNV 224
LLS NV
Sbjct: 262 LLSTSNV 268
>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional.
Length = 300
Score = 41.5 bits (97), Expect = 2e-04
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 141 YNGHANIVELLIQWGADTQKTTIDG-WTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGL 199
+ LLI++GAD + + TPL+ + +C+ +LL+YG D+N QTN +
Sbjct: 80 CDNDDAAK-LLIRYGADVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMV 138
Query: 200 TPLHLA 205
TP+ LA
Sbjct: 139 TPIELA 144
Score = 38.4 bits (89), Expect = 0.002
Identities = 19/87 (21%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 144 HANIVELLIQWGADTQ----KTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTN-GG 198
+ +I++ +++ GAD + + PL A +N + +L+ YG DVN
Sbjct: 45 YTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104
Query: 199 LTPLHLAASHSHSRDVLMILLSHPNVD 225
+TPL+++ H + + ++L +++
Sbjct: 105 ITPLYISVLHGCLKCLEILLSYGADIN 131
>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional.
Length = 154
Score = 39.9 bits (93), Expect = 3e-04
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 116 ALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVE---LLIQWGADTQ-KTTIDGWTPLHS 171
A+ D + LV ++ G +H A+ E LL++WGAD K + G TPLH
Sbjct: 39 AISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHI 98
Query: 172 ACKWNNTECVIVLLNY-GVDVNAQTNGGLTPLHLAASHSHSRDVLMILL 219
A N E L N GV++ TP ++A ++ +M +L
Sbjct: 99 AVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAK--MMNIL 145
>gnl|CDD|165231 PHA02917, PHA02917, ankyrin-like protein; Provisional.
Length = 661
Score = 41.5 bits (97), Expect = 3e-04
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 165 GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSH-PN 223
G T LH A ++N V +LL G DVN ++N G T + +A + S + ++L +LL H P
Sbjct: 452 GETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPT 511
Query: 224 VDPHILSTSNES 235
+D I S S
Sbjct: 512 LDCVIDSLREIS 523
>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel;
Provisional.
Length = 823
Score = 41.0 bits (96), Expect = 4e-04
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 143 GHANIVELLIQWGADTQKTTIDGWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPL 202
G+A ++E L++ D G TPLH A +CV+VLL + +V+ + G T L
Sbjct: 536 GNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTAL 595
Query: 203 HLAASHSHSRDVLMILLSHPNV-DPHI 228
A S H + + IL ++ DPH
Sbjct: 596 WNAISAKHHK-IFRILYHFASISDPHA 621
Score = 40.6 bits (95), Expect = 7e-04
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 104 EAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTI 163
AA+ ND ++ LL VD+ D G + L A H ++V LLI GAD K
Sbjct: 628 TAAKRNDLTAMKELLKQGLN-VDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANT 686
Query: 164 D 164
D
Sbjct: 687 D 687
Score = 36.8 bits (85), Expect = 0.011
Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 36/157 (22%)
Query: 102 ILEAAEHNDSKTLEALL--DLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQ 159
+L A ++ LE LL LD D D G +PLH A G+ + V +L++ +
Sbjct: 529 LLTVASTGNAALLEELLKAKLDP---DIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVH 585
Query: 160 KTTIDG----WTPLHS---------------------------ACKWNNTECVIVLLNYG 188
+G W + + A K N+ + LL G
Sbjct: 586 IRDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQG 645
Query: 189 VDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVD 225
++V+++ + G T L +A + H V +++++ +VD
Sbjct: 646 LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVD 682
>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional.
Length = 169
Score = 39.3 bits (91), Expect = 6e-04
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 161 TTIDGWTPLHSAC----KWNNTECVIVLLNYGVDVNAQTN-GGLTPLHLAASHSHSRDVL 215
T G +H A E + L+ G D+NAQ G T LHLAA H D+
Sbjct: 56 TDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAA-HRRDHDLA 114
Query: 216 MILLSHPNVDPHILSTSNESAREIA 240
L P +D H + N+S E+A
Sbjct: 115 EWLCCQPGIDLHFCNADNKSPFELA 139
>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional.
Length = 494
Score = 37.0 bits (86), Expect = 0.008
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 146 NIVELLIQWGADTQ-KTTIDGWTPLHSACKWNNTEC--------VIVLLNYGVDVNAQTN 196
IV+LLI GAD K I+ TPL N E V +LL +G D+N +T
Sbjct: 51 KIVKLLIDNGADVNYKGYIE--TPL--CAVLRNREITSNKIKKIVKLLLKFGADINLKTF 106
Query: 197 GGLTPL--HLAASHSHSRDVLMILLS 220
G++P+ + S+ ++ D+L LLS
Sbjct: 107 NGVSPIVCFIYNSNINNCDMLRFLLS 132
Score = 34.7 bits (80), Expect = 0.044
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 165 GWTPLHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPN 223
G+ PL + K +N E LL G D+ + G T L A H + + IL P
Sbjct: 256 GFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG 314
>gnl|CDD|213950 TIGR04337, AmmeMemoSam_rS, AmmeMemoRadiSam system radical SAM
enzyme. Members of this protein family are
uncharacterized radical SAM enzymes that occur in a
prokaryotic three-gene system along with homologs of
mammalian proteins Memo (Mediator of ErbB2-driven cell
MOtility) and AMMERCR1 (Alport syndrome, Mental
Retardation, Midface hypoplasia, and Elliptocytosis).
Among radical SAM enzymes that have been experimentally
characterized, the most closely related in sequence
include activases of pyruvate formate-lyase and of
benzylsuccinate synthase.
Length = 349
Score = 33.0 bits (76), Expect = 0.13
Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 25/79 (31%)
Query: 169 LHSACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMILLSHPNVDPHI 228
L + C+W ++ N G DV PLH A H + +L P P
Sbjct: 227 LEAMCEW-------IVENLGPDV---------PLHFTAFHPDFK-----MLDTPPTPPAT 265
Query: 229 LSTSNESAREIATRSGIHY 247
L+ AREIA +G+HY
Sbjct: 266 LT----RAREIALANGLHY 280
>gnl|CDD|165157 PHA02795, PHA02795, ankyrin-like protein; Provisional.
Length = 437
Score = 32.7 bits (74), Expect = 0.20
Identities = 15/48 (31%), Positives = 28/48 (58%)
Query: 125 VDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLHSA 172
++ +D G + L+RA Y G+ ++V L++ GA+ +G+T L A
Sbjct: 214 INQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVA 261
>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional.
Length = 209
Score = 32.1 bits (73), Expect = 0.21
Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 84 DGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLVDAVDKDGYSPLHRACYNG 143
+ S LH +KN + + L+ L+D S+ + D+DG + LH N
Sbjct: 86 NNLSALHHYLSFNKNV----------EPEILKILIDSGSS-ITEEDEDGKNLLHMYMCNF 134
Query: 144 HANI--VELLIQWGADTQKTTIDGWTPLHSACKW-NNTECVIVLLNYGVDVNAQTNGGLT 200
+ I ++LLI G D L+S + ++ + L + G+D+N G
Sbjct: 135 NVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYN 194
Query: 201 PLHL 204
L
Sbjct: 195 CYDL 198
>gnl|CDD|165154 PHA02791, PHA02791, ankyrin-like protein; Provisional.
Length = 284
Score = 31.6 bits (71), Expect = 0.32
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 111 SKTLEALLDLDSTLVDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWTPLH 170
SK L++ L D G+S L+ A + + +V L+ GA K ++ PLH
Sbjct: 11 SKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGA--LKNLLENEFPLH 66
Query: 171 SACKWNNTECVIVLLNYGVDVNAQTNGGLTPLHLAASHSHSRDVLMIL 218
A +T+ V +LL G+D + + G T L+ A + + V + +
Sbjct: 67 QAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFV 114
>gnl|CDD|227731 COG5444, COG5444, Uncharacterized conserved protein [Function
unknown].
Length = 565
Score = 29.7 bits (67), Expect = 1.7
Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 19/110 (17%)
Query: 31 VSAWDDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTLEALLDHDSTL------------- 77
S + ILE ++ EA L H+
Sbjct: 65 RSIRIFLISMKIAFEKSISA----ILEDEPLSNGYVEEAFLKHELPNGYDRYEEIMEEQK 120
Query: 78 --VDAVDKDGYSPLHRACYNDKNKRKILEAAEHNDSKTLEALLDLDSTLV 125
+ + D L + ++ + +++A + TLE L LD +
Sbjct: 121 KAIKDILSDVSHILDLGKLDTEDFKDEVDSARKHAKDTLEKLYKLDQEGM 170
>gnl|CDD|165089 PHA02716, PHA02716, CPXV016; CPX019; EVM010; Provisional.
Length = 764
Score = 29.5 bits (66), Expect = 1.9
Identities = 25/71 (35%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 165 GWTPLH-SACKWNNTECV----IVLLNYGVDVNAQTNGGLTPLHLAA-----SHSHSRDV 214
G TPLH S N V + LL+ ++N T G+TPL L S V
Sbjct: 497 GMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIV 556
Query: 215 LMILLSHPNVD 225
IL PNVD
Sbjct: 557 KNILDKRPNVD 567
>gnl|CDD|184103 PRK13512, PRK13512, coenzyme A disulfide reductase; Provisional.
Length = 438
Score = 28.6 bits (64), Expect = 3.9
Identities = 13/22 (59%), Positives = 14/22 (63%)
Query: 85 GYSPLHRACYNDKNKRKILEAA 106
G SPLH Y D + RKIL AA
Sbjct: 364 GNSPLHLRVYYDTSNRKILRAA 385
>gnl|CDD|131035 TIGR01980, sufB, FeS assembly protein SufB. This protein, SufB,
forms a cytosolic complex SufBCD. This complex enhances
the cysteine desulfurase of SufSE. The system, together
with SufA, is believed to act in iron-sulfur cluster
formation during oxidative stress. Note that SufC
belongs to the family of ABC transporter ATP binding
proteins, so this protein, encoded by an adjacent gene,
has often been annotated as a transporter component
[Biosynthesis of cofactors, prosthetic groups, and
carriers, Other].
Length = 448
Score = 28.5 bits (64), Expect = 4.1
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 141 YNGHANIVELLIQWGADTQKTTIDGWTP 168
+ HA +VEL+++ A + +T+ W+
Sbjct: 231 NSLHAAVVELIVKEDARVRYSTVQNWSK 258
>gnl|CDD|236231 PRK08308, PRK08308, acyl-CoA synthetase; Validated.
Length = 414
Score = 28.5 bits (64), Expect = 4.3
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 7/38 (18%)
Query: 217 ILLSHPNVDPHILSTSNESAREIATRSGIHYGLFETIE 254
+L HP T E+A +A R+G H L+ +
Sbjct: 59 VLPIHP-------DTPKEAAIRMAKRAGCHGLLYGESD 89
>gnl|CDD|165080 PHA02705, PHA02705, hypothetical protein; Provisional.
Length = 72
Score = 26.2 bits (57), Expect = 4.6
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 10/60 (16%)
Query: 35 DDDVVGIEDSRNPQDKNKRNILEAAEHNDSKTL----------EALLDHDSTLVDAVDKD 84
D DV +ED N D+ K IL+ E ++K + EAL+ + S+ D++DK+
Sbjct: 2 DTDVANVEDIMNEIDREKEEILKNVEMENNKNINKNHPSKYIREALVINTSSNSDSIDKE 61
>gnl|CDD|165155 PHA02792, PHA02792, ankyrin-like protein; Provisional.
Length = 631
Score = 28.4 bits (63), Expect = 5.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 125 VDAVDKDGYSPLHRACYNGHANIVELLIQWGADTQKTTIDGWT 167
++ +DK G S L+ + ++VE LI GAD TT G T
Sbjct: 403 INKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGST 445
>gnl|CDD|234551 TIGR04336, AmmeMemoSam_B, AmmeMemoRadiSam system protein B.
Members of this protein family belong to the same domain
family as the mammalian protein Memo (Mediator of
ErbB2-driven cell MOtility). Members of the present
family occur as part of a three gene system with an
uncharacterized radical SAM enzyme and a homolog of the
mammalian protein AMMECR1, a mammalian protein named for
AMME - Alport syndrome, Mental Retardation, Midface
hypoplasia, and Elliptocytosis. Memo in humans has
protein-protein interaction activity with binding of
phosphorylated Try, but members of this family may be
active as enzymes, as suggested by homology to a class
of nonheme iron dioxygenases.
Length = 269
Score = 27.5 bits (62), Expect = 6.7
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 104 EAAEHNDSKTLEALLDLDST-LVDAVDKD-----GYSPL 136
E A D +EA+L LD L D V + G P+
Sbjct: 190 EEARRLDRAAIEAILALDPEGLYDVVAEKNISMCGVGPI 228
>gnl|CDD|219780 pfam08286, Spc24, Spc24 subunit of Ndc80. Spc24 is a component
of the evolutionarily conserved kinetochore-associated
Ndc80 complex and is involved in chromosome
segregation.
Length = 117
Score = 26.5 bits (59), Expect = 8.2
Identities = 14/69 (20%), Positives = 28/69 (40%), Gaps = 9/69 (13%)
Query: 8 NELTEKMQQLQESIRDGSFNIGQVSAWDDDVV---------GIEDSRNPQDKNKRNILEA 58
EL E++++L+E +G + DD V GI+ + +N + ++
Sbjct: 30 EELKERLEELEEQEVEGDEVDEDETPVDDSNVLKLKLYRSLGIDLESDEDGENDKVLIRN 89
Query: 59 AEHNDSKTL 67
D + L
Sbjct: 90 DNKGDVQVL 98
>gnl|CDD|179529 PRK03057, PRK03057, hypothetical protein; Provisional.
Length = 180
Score = 26.7 bits (59), Expect = 9.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 208 HSHSRDVLMILLSHPNVDPHILSTSNESARE 238
H +R VL+ LL HP++ ++ T E R
Sbjct: 21 HPDARFVLLYLLQHPHLLENVHFTETEQKRA 51
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.313 0.131 0.388
Gapped
Lambda K H
0.267 0.0786 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 13,100,226
Number of extensions: 1212567
Number of successful extensions: 1138
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1032
Number of HSP's successfully gapped: 111
Length of query: 265
Length of database: 10,937,602
Length adjustment: 95
Effective length of query: 170
Effective length of database: 6,723,972
Effective search space: 1143075240
Effective search space used: 1143075240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.0 bits)