Your job contains 1 sequence.
>psy17863
MEYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND
ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT
VMMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSL
CSHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATG
ELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN
SLCSHPTRKHIMSACGNNVKLWTAEEDYGQAGLSSLYLNMS
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17863
(341 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028897 - symbol:CG4935 species:7227 "Drosophila m... 501 6.0e-48 1
MGI|MGI:1915086 - symbol:Wdr83 "WD repeat domain containi... 479 1.3e-45 1
RGD|1306947 - symbol:Wdr83 "WD repeat domain 83" species:... 474 4.4e-45 1
UNIPROTKB|E2RRL3 - symbol:WDR83 "Uncharacterized protein"... 470 1.2e-44 1
UNIPROTKB|F1SEX9 - symbol:WDR83 "Uncharacterized protein"... 469 1.5e-44 1
UNIPROTKB|Q9BRX9 - symbol:WDR83 "WD repeat domain-contain... 468 1.9e-44 1
UNIPROTKB|Q0VCN2 - symbol:MORG1 "Mitogen-activated protei... 466 3.1e-44 1
ZFIN|ZDB-GENE-040718-126 - symbol:wdr83 "WD repeat domain... 448 2.5e-42 1
WB|WBGene00018014 - symbol:F33G12.2 species:6239 "Caenorh... 429 2.6e-40 1
UNIPROTKB|Q19986 - symbol:F33G12.2 "Protein F33G12.2" spe... 429 2.6e-40 1
DICTYBASE|DDB_G0289711 - symbol:morg1 "mitogen-activated ... 402 1.9e-37 1
TAIR|locus:2176085 - symbol:AT5G64730 "AT5G64730" species... 344 2.6e-31 1
ASPGD|ASPL0000032162 - symbol:AN8468 species:162425 "Emer... 332 1.3e-28 1
POMBASE|SPBC713.05 - symbol:SPBC713.05 "WD repeat protein... 284 5.9e-25 1
FB|FBgn0040066 - symbol:wds "will die slowly" species:722... 271 1.4e-23 1
UNIPROTKB|Q0P593 - symbol:WDR69 "Outer row dynein assembl... 266 7.8e-23 1
UNIPROTKB|Q5M786 - symbol:wdr5 "WD repeat-containing prot... 264 7.8e-23 1
UNIPROTKB|G3N3E5 - symbol:WDR5 "WD repeat-containing prot... 258 3.4e-22 1
UNIPROTKB|Q2KIG2 - symbol:WDR5 "WD repeat-containing prot... 258 3.4e-22 1
UNIPROTKB|P61964 - symbol:WDR5 "WD repeat-containing prot... 258 3.4e-22 1
UNIPROTKB|F1S034 - symbol:WDR5 "Uncharacterized protein" ... 258 3.4e-22 1
MGI|MGI:2155884 - symbol:Wdr5 "WD repeat domain 5" specie... 258 3.4e-22 1
RGD|1305159 - symbol:Wdr5 "WD repeat domain 5" species:10... 258 3.4e-22 1
UNIPROTKB|A8X8C6 - symbol:tag-125 "WD repeat-containing p... 258 3.4e-22 1
MGI|MGI:1916794 - symbol:Wdr5b "WD repeat domain 5B" spec... 258 3.4e-22 1
ASPGD|ASPL0000006405 - symbol:AN6960 species:162425 "Emer... 270 8.2e-22 1
UNIPROTKB|Q8N136 - symbol:WDR69 "Outer row dynein assembl... 257 8.5e-22 1
RGD|1561436 - symbol:LOC363267 "hypothetical protein LOC3... 250 1.1e-20 1
ZFIN|ZDB-GENE-050419-255 - symbol:daw1 "dynein assembly f... 250 1.1e-20 1
DICTYBASE|DDB_G0287273 - symbol:wdr5 "WD40 repeat-contain... 244 1.2e-20 1
WB|WBGene00006474 - symbol:wdr-5.1 species:6239 "Caenorha... 247 3.6e-20 1
UNIPROTKB|Q17963 - symbol:tag-125 "WD repeat-containing p... 247 3.6e-20 1
UNIPROTKB|G3V221 - symbol:WDR83 "Mitogen-activated protei... 223 2.0e-18 1
ASPGD|ASPL0000046644 - symbol:AN2021 species:162425 "Emer... 244 3.0e-18 1
FB|FBgn0020618 - symbol:Rack1 "Receptor of activated prot... 219 1.3e-16 1
ZFIN|ZDB-GENE-050116-3 - symbol:cdc40 "cell division cycl... 178 2.3e-16 2
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 221 4.6e-16 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 215 7.3e-16 1
CGD|CAL0000165 - symbol:orf19.536 species:5476 "Candida a... 223 9.7e-16 1
ASPGD|ASPL0000038644 - symbol:AN10391 species:162425 "Eme... 220 1.3e-15 1
TAIR|locus:2097435 - symbol:WDR5a "AT3G49660" species:370... 211 1.6e-15 1
MGI|MGI:1923896 - symbol:Wdr38 "WD repeat domain 38" spec... 208 2.5e-15 1
UNIPROTKB|I3LSG8 - symbol:I3LSG8 "Uncharacterized protein... 179 3.6e-15 2
TAIR|locus:2005539 - symbol:PRL1 "AT4G15900" species:3702... 211 4.9e-15 2
UNIPROTKB|P63247 - symbol:GNB2L1 "Guanine nucleotide-bind... 206 7.4e-15 1
UNIPROTKB|P63243 - symbol:GNB2L1 "Guanine nucleotide-bind... 206 7.4e-15 1
UNIPROTKB|F1PLR0 - symbol:GNB2L1 "Uncharacterized protein... 206 7.4e-15 1
UNIPROTKB|P63244 - symbol:GNB2L1 "Guanine nucleotide-bind... 206 7.4e-15 1
UNIPROTKB|P63246 - symbol:GNB2L1 "Guanine nucleotide-bind... 206 7.4e-15 1
UNIPROTKB|B1N1C2 - symbol:GNB2L1 "Uncharacterized protein... 206 7.4e-15 1
UNIPROTKB|Q4R7Y4 - symbol:GNB2L1 "Guanine nucleotide-bind... 206 7.4e-15 1
UNIPROTKB|Q5U275 - symbol:gnb2l1 "LOC495666 protein" spec... 206 7.4e-15 1
MGI|MGI:101849 - symbol:Gnb2l1 "guanine nucleotide bindin... 206 7.4e-15 1
RGD|69229 - symbol:Gnb2l1 "guanine nucleotide binding pro... 206 7.4e-15 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 212 7.6e-15 1
UNIPROTKB|G8JL27 - symbol:GNB2L1 "Guanine nucleotide-bind... 206 8.0e-15 1
RGD|620575 - symbol:Apaf1 "apoptotic peptidase activating... 173 9.7e-15 2
UNIPROTKB|O42249 - symbol:gnb2l1 "Guanine nucleotide-bind... 205 1.0e-14 1
UNIPROTKB|I3LI24 - symbol:GNB2L1 "Guanine nucleotide-bind... 205 1.0e-14 1
ASPGD|ASPL0000017294 - symbol:AN3926 species:162425 "Emer... 205 1.6e-14 2
POMBASE|SPAC343.04c - symbol:SPAC343.04c "WD repeat prote... 144 2.5e-14 2
SGD|S000004951 - symbol:LST8 "Protein required for the tr... 134 4.0e-14 2
FB|FBgn0031229 - symbol:CG3436 species:7227 "Drosophila m... 202 4.3e-14 1
UNIPROTKB|G4MNI3 - symbol:MGG_05616 "Pre-mRNA-splicing fa... 206 4.6e-14 1
DICTYBASE|DDB_G0271788 - symbol:wdr57 "putative U5 small ... 202 4.7e-14 1
UNIPROTKB|Q5RD06 - symbol:POC1B "POC1 centriolar protein ... 204 5.9e-14 1
ZFIN|ZDB-GENE-990415-89 - symbol:gnb2l1 "guanine nucleoti... 199 6.0e-14 1
CGD|CAL0005939 - symbol:TUP1 species:5476 "Candida albica... 205 6.2e-14 1
UNIPROTKB|P0CY34 - symbol:TUP1 "Transcriptional repressor... 205 6.2e-14 1
UNIPROTKB|Q96DI7 - symbol:SNRNP40 "U5 small nuclear ribon... 201 6.3e-14 1
MGI|MGI:1913835 - symbol:Snrnp40 "small nuclear ribonucle... 201 6.4e-14 1
UNIPROTKB|F1MLP7 - symbol:SNRNP40 "U5 small nuclear ribon... 201 6.4e-14 1
UNIPROTKB|F1SVA6 - symbol:SNRNP40 "Uncharacterized protei... 201 6.4e-14 1
UNIPROTKB|Q2HJH6 - symbol:SNRNP40 "U5 small nuclear ribon... 201 6.4e-14 1
ASPGD|ASPL0000014385 - symbol:cpcB species:162425 "Emeric... 178 6.5e-14 2
UNIPROTKB|B4DQJ1 - symbol:SNRNP40 "U5 small nuclear ribon... 201 1.0e-13 1
POMBASE|SPBP22H7.07 - symbol:prp5 "WD repeat protein Prp5... 201 1.5e-13 1
ZFIN|ZDB-GENE-051120-180 - symbol:taf5 "TAF5 RNA polymera... 204 1.6e-13 1
TAIR|locus:2092707 - symbol:RACK1C_AT "AT3G18130" species... 196 1.7e-13 1
UNIPROTKB|E1BHK9 - symbol:E1BHK9 "Uncharacterized protein... 202 1.8e-13 1
UNIPROTKB|E2RR78 - symbol:TAF5L "Uncharacterized protein"... 202 1.9e-13 1
RGD|2323942 - symbol:Poc1b "POC1 centriolar protein homol... 200 2.0e-13 1
UNIPROTKB|G3V1X0 - symbol:POC1B "POC1 centriolar protein ... 199 2.1e-13 1
POMBASE|SPCC5E4.03c - symbol:taf5 "SAGA complex subunit/T... 202 2.2e-13 1
UNIPROTKB|I3LTI2 - symbol:NLE1 "Uncharacterized protein" ... 160 2.5e-13 2
CGD|CAL0000124 - symbol:ASC1 species:5476 "Candida albica... 194 2.6e-13 1
UNIPROTKB|P83774 - symbol:ASC1 "Guanine nucleotide-bindin... 194 2.6e-13 1
RGD|1309198 - symbol:Snrnp40 "small nuclear ribonucleopro... 196 2.6e-13 1
UNIPROTKB|Q8TC44 - symbol:POC1B "POC1 centriolar protein ... 199 2.7e-13 1
TAIR|locus:2179300 - symbol:TAF5 "AT5G25150" species:3702... 201 3.0e-13 1
UNIPROTKB|J9P544 - symbol:FBXW11 "Uncharacterized protein... 199 3.1e-13 1
UNIPROTKB|B4DH70 - symbol:FBXW11 "cDNA FLJ54601, highly s... 199 3.1e-13 1
UNIPROTKB|O75529 - symbol:TAF5L "TAF5-like RNA polymerase... 200 3.1e-13 1
UNIPROTKB|E2RTE4 - symbol:FBXW11 "Uncharacterized protein... 199 3.3e-13 1
UNIPROTKB|F1MLG0 - symbol:FBXW11 "Uncharacterized protein... 199 3.3e-13 1
TAIR|locus:2089303 - symbol:AT3G16650 "AT3G16650" species... 198 3.4e-13 2
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 198 3.5e-13 1
UNIPROTKB|F1PBF1 - symbol:FBXW11 "Uncharacterized protein... 199 3.5e-13 1
UNIPROTKB|Q9UKB1 - symbol:FBXW11 "F-box/WD repeat-contain... 199 3.5e-13 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 193 3.6e-13 1
WARNING: Descriptions of 1039 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0028897 [details] [associations]
symbol:CG4935 species:7227 "Drosophila melanogaster"
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR018391 SMART:SM00564 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 GeneTree:ENSGT00700000104496 KO:K13124
OMA:CKQGAVR EMBL:AY113244 RefSeq:NP_609782.2 UniGene:Dm.12032
SMR:Q9VJL9 STRING:Q9VJL9 EnsemblMetazoa:FBtr0080825 GeneID:34955
KEGG:dme:Dmel_CG4935 UCSC:CG4935-RA FlyBase:FBgn0028897
InParanoid:Q9VJL9 OrthoDB:EOG4CRJFP GenomeRNAi:34955 NextBio:791080
Uniprot:Q9VJL9
Length = 308
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 90/148 (60%), Positives = 112/148 (75%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
TIDCKQGA+RAVR+NVDG+YCL+CGSDKKIKLWNP LLLKTYGGHA EV DA +CDS
Sbjct: 12 TIDCKQGAVRAVRYNVDGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDS 71
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
S I S + DKS+I W+V+TG PVRR R HA V CV FNEDSS+ ISG +DN VM WD++
Sbjct: 72 SYIVSASLDKSIIYWDVSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIR 131
Query: 128 SRSHHPIQCCLDSKDSQIFCGSSDGKIY 155
+R P+Q +++D +++ +IY
Sbjct: 132 TRRLDPVQVMKEARDCITTVATNENRIY 159
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 79/262 (30%), Positives = 129/262 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + S SDK + LW +G ++ + HA +VT + DSS ++S S D +++ WD
Sbjct: 28 DGTYCLSCGSDKKIKLWNPASGLLLKTYGGHADEVTDAAGSCDSSYIVSASLDKSIIYWD 87
Query: 126 VKS-------RSHHP-IQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
V + RSH ++C ++DS I G D + W + + +
Sbjct: 88 VSTGAPVRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWDIRTRRLDPVQVMKEARDC 147
Query: 177 VNSLCSHPTRKHIMSACG----NNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECL 232
+ ++ ++ R + S G ++++ D EPI TRD QC++ D +
Sbjct: 148 ITTVATNENRIYAASLDGCVRTYDIRVGELTCDKIGEPITYLAQTRDEQCLVAGCQDSVV 207
Query: 233 RLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 292
RL D TG LL EY+GH+ D+ IEC + S D+QI GSSDG + + L+D + +
Sbjct: 208 RLLDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRI 267
Query: 293 SVGKAVVNSLCSHPTRKHIMSA 314
S VV+SL +HP R+ ++ A
Sbjct: 268 SDNGGVVHSLATHPKRQEMLFA 289
Score = 165 (63.1 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 53/219 (24%), Positives = 101/219 (46%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDA--TA 63
V+ + G +R V FN D S ++ G D + W+ R L E D T
Sbjct: 94 VRRLRSHAGGVRCVCFNEDSSIAISGGRDNAVMCWD-IRTRRLDPVQV-MKEARDCITTV 151
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
A + ++I + + D V +++ G+ + +T + D +++G QD+ V +
Sbjct: 152 ATNENRIYAASLDGCVRTYDIRVGELT--CDKIGEPITYLAQTRDEQCLVAGCQDSVVRL 209
Query: 124 WDVKS-------RSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV 172
D ++ R H + I+C + S D+QI GSSDG + + L+D + + S
Sbjct: 210 LDCETGGLLSEYRGHRGDDYHIECGILSNDAQIVTGSSDGDAFVYDLLDGKVLQRIRISD 269
Query: 173 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQEPI 211
VV+SL +HP R+ ++ A ++ +++ + +E +
Sbjct: 270 NGGVVHSLATHPKRQEMLFARRRDMYVFSTDLQIEEEQL 308
>MGI|MGI:1915086 [details] [associations]
symbol:Wdr83 "WD repeat domain containing 83" species:10090
"Mus musculus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1915086 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:AY365434 EMBL:AK005790 EMBL:AK020654 EMBL:BC005587
EMBL:BC019369 EMBL:BC094624 IPI:IPI00118714 IPI:IPI00407931
IPI:IPI00624217 RefSeq:NP_080675.2 UniGene:Mm.334680
ProteinModelPortal:Q9DAJ4 SMR:Q9DAJ4 STRING:Q9DAJ4
PhosphoSite:Q9DAJ4 PRIDE:Q9DAJ4 Ensembl:ENSMUST00000093357
Ensembl:ENSMUST00000149050 GeneID:67836 KEGG:mmu:67836
UCSC:uc009mph.1 InParanoid:Q9DAJ4 NextBio:325661 Bgee:Q9DAJ4
CleanEx:MM_1500041N16RIK Genevestigator:Q9DAJ4
GermOnline:ENSMUSG00000005150 Uniprot:Q9DAJ4
Length = 315
Score = 479 (173.7 bits), Expect = 1.3e-45, P = 1.3e-45
Identities = 104/256 (40%), Positives = 158/256 (61%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
++T+DC QGA+RAVRFNVDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA +
Sbjct: 18 MKTLDCSQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSF 77
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D+S + SG DK+V+LW+V TGQ VR++R HA KV V+FNE+++V++SGS D++V WD
Sbjct: 78 DNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Query: 126 VKSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+SR P+Q +++D +I GS DG++ ++ L Q+S+ VG +
Sbjct: 138 CRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYDL-RMGQVSS--DYVGSPI 194
Query: 177 VNSLCSHPTRKHIMSACGNNVKLW---TAE--EDY----GQEPIVDACFT-RDCQCILTC 226
+ S + ++S+ + ++L T E +Y Q+ +D C + RD +++C
Sbjct: 195 TCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTH-VVSC 253
Query: 227 STDECLRLFDKATGEL 242
S D + +D G L
Sbjct: 254 SEDGKVFFWDLVEGAL 269
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 92/285 (32%), Positives = 141/285 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK++ LW G +R + H +V + D+S + SG D TV++WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWD 95
Query: 126 V-------KSRSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
V K R H + +Q + + + I GS D + W S+ + ++ +
Sbjct: 96 VATGQVVRKFRGHAGKVNTVQ--FNEEATVILSGSIDSSVRCWDC--RSRKPEPVQTLDE 151
Query: 175 AVVNSLCSHPTRKH-IM--SACGN----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCS 227
A + + S H I+ S G ++++ DY PI CF+RD QC L S
Sbjct: 152 AR-DGISSVKVSDHEILAGSVDGRVRRYDLRMGQVSSDYVGSPITCTCFSRDGQCTLISS 210
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 287
D LRL DK TGELL EY GHK+ ++++CCL +D+ + S DGK++ W LV+ +
Sbjct: 211 LDSTLRLLDKDTGELLGEYVGHKNQQYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALA 270
Query: 288 STLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQAG 332
L VG VV SL HPT +++A G +++ W EE Y G
Sbjct: 271 LAL--PVGSNVVQSLAYHPTEPCLLTAMGGSIQYWR-EETYEAEG 312
>RGD|1306947 [details] [associations]
symbol:Wdr83 "WD repeat domain 83" species:10116 "Rattus
norvegicus" [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA;ISO] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0005681 "spliceosomal complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1306947 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013
GO:GO:0000375 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V EMBL:AY940050 IPI:IPI00209921
RefSeq:NP_001041312.1 UniGene:Rn.3570 ProteinModelPortal:Q5BLX8
PRIDE:Q5BLX8 GeneID:288924 KEGG:rno:288924 InParanoid:Q5BLX8
NextBio:629000 Genevestigator:Q5BLX8 Uniprot:Q5BLX8
Length = 315
Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
Identities = 103/256 (40%), Positives = 158/256 (61%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
++T+DC QGA+RAVRFNVDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA +
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSF 77
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D+S + SG DK+V+LW+V TGQ VR++R HA KV V+FNE+++V++SGS D++V WD
Sbjct: 78 DNSHLCSGGGDKTVVLWDVATGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Query: 126 VKSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+SR P+Q +++D +I GS DG++ ++ L Q+++ VG +
Sbjct: 138 CRSRKPEPVQTLDEARDGISSVKVSDHEILAGSVDGRVRRYDL-RMGQVTS--DYVGSPI 194
Query: 177 VNSLCSHPTRKHIMSACGNNVKLW---TAE--EDY----GQEPIVDACFT-RDCQCILTC 226
+ S + ++S+ + ++L T E +Y Q+ +D C + RD +++C
Sbjct: 195 TCTCFSRDGQCTLISSLDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTH-VVSC 253
Query: 227 STDECLRLFDKATGEL 242
S D + +D G L
Sbjct: 254 SEDGKVFFWDLVEGSL 269
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 92/285 (32%), Positives = 140/285 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK++ LW G +R + H +V + D+S + SG D TV++WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSHLCSGGGDKTVVLWD 95
Query: 126 V-------KSRSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
V K R H + +Q + + + I GS D + W S+ + ++ +
Sbjct: 96 VATGQVVRKFRGHAGKVNTVQ--FNEEATVILSGSIDSSVRCWDC--RSRKPEPVQTLDE 151
Query: 175 AVVNSLCSHPTRKH-IM--SACGN----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCS 227
A + + S H I+ S G ++++ DY PI CF+RD QC L S
Sbjct: 152 AR-DGISSVKVSDHEILAGSVDGRVRRYDLRMGQVTSDYVGSPITCTCFSRDGQCTLISS 210
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 287
D LRL DK TGELL EY GHK+ ++++CCL +D+ + S DGK++ W LV+ S
Sbjct: 211 LDSTLRLLDKDTGELLGEYVGHKNQKYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGSLA 270
Query: 288 STLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQAG 332
L VG VV SL HP +++A G +++ W EE Y G
Sbjct: 271 LAL--PVGSNVVQSLAYHPADPCLLTAMGGSIQYWR-EETYEAEG 312
>UNIPROTKB|E2RRL3 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 CTD:84292 KO:K13124
OMA:CKQGAVR EMBL:AAEX03012407 RefSeq:XP_542047.1
ProteinModelPortal:E2RRL3 Ensembl:ENSCAFT00000027316 GeneID:484931
KEGG:cfa:484931 NextBio:20858998 Uniprot:E2RRL3
Length = 315
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 102/256 (39%), Positives = 155/256 (60%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
V+T+DC QGA+RAVRFNVDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA +
Sbjct: 18 VKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSF 77
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D+S + SG DK+V+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D+++ WD
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWD 137
Query: 126 VKSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+SR P+Q +++D ++ GS DG++ ++ L S VG +
Sbjct: 138 CRSRRPEPVQTLDEARDGISSVKVSDHEVLSGSVDGRVRRYDLRMGQLFSDY---VGSPI 194
Query: 177 VNSLCSHPTRKHIMSACGNNVKLW---TAE--EDY----GQEPIVDACFT-RDCQCILTC 226
+ S + ++S+ + ++L T E +Y QE +D C + RD +++C
Sbjct: 195 TCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTH-VVSC 253
Query: 227 STDECLRLFDKATGEL 242
S D + +D G L
Sbjct: 254 SEDGKVYFWDLVEGAL 269
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 93/285 (32%), Positives = 140/285 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK++ LW G +R + H +V + D+S + SG D V++WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 126 VKS-------RSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
V S R H + +Q + + + I GS D I W S+ + ++ +
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQ--FNEEATVILSGSIDSSIRCWDC--RSRRPEPVQTLDE 151
Query: 175 AVVNSLCSHPTRKH-IMSAC--GN----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCS 227
A + + S H ++S G ++++ DY PI CF+RD QC L S
Sbjct: 152 AR-DGISSVKVSDHEVLSGSVDGRVRRYDLRMGQLFSDYVGSPITCTCFSRDGQCTLVSS 210
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 287
D LRL DK TGELL EY GHK+ +++++CCL +D+ + S DGK+Y W LV+ +
Sbjct: 211 LDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVYFWDLVEGALA 270
Query: 288 STLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQAG 332
L VG VV SL HPT +++A G +V W EE Y G
Sbjct: 271 LAL--PVGPGVVQSLAYHPTEPCLLTAMGGSVHCWR-EEAYEAEG 312
>UNIPROTKB|F1SEX9 [details] [associations]
symbol:WDR83 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GO:GO:0000375 GeneTree:ENSGT00700000104496 KO:K13124 OMA:CKQGAVR
EMBL:CU856041 RefSeq:XP_003123369.1 Ensembl:ENSSSCT00000014996
GeneID:100519823 KEGG:ssc:100519823 Uniprot:F1SEX9
Length = 311
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 102/257 (39%), Positives = 156/257 (60%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
++T+DC QGA+RAVRFNVDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA +
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSF 77
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D+S + SG DK+V+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D++V WD
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSVRCWD 137
Query: 126 VKSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+SR P+Q +++D ++ GS DG++ ++ L S VG +
Sbjct: 138 CRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDY---VGSPI 194
Query: 177 VNSLCSHPTRKHIMSACGNNVKLW---TAE--EDY----GQEPIVDACFT-RDCQCILTC 226
+ S + ++S+ + ++L T E +Y QE +D C + RD +++C
Sbjct: 195 TCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTH-VVSC 253
Query: 227 STDECLRLFDKATGELL 243
S D + +D G L+
Sbjct: 254 SEDGKVFFWDLVEGVLV 270
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 90/281 (32%), Positives = 140/281 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK++ LW G +R + H +V + D+S + SG D V++WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 126 VKS-------RSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
V S R H + +Q + + + I GS D + W S+ + ++ +
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQ--FNEEATVILSGSIDSSVRCWDC--RSRKPEPVQTLDE 151
Query: 175 AVVNSLCSHPTRKHIM---SACGN----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCS 227
A + + S H + S G ++++ DY PI CF+RD QC L S
Sbjct: 152 AR-DGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVGSPITCTCFSRDGQCTLVSS 210
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 287
D LRL DK TGELL EY GHK+ +++++CCL +D+ + S DGK++ W LV+ +
Sbjct: 211 LDSTLRLLDKDTGELLGEYTGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGVLV 270
Query: 288 STLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 328
L VG +VV SL HPT +++A G +V+ W EE Y
Sbjct: 271 LAL--PVGPSVVQSLAYHPTEPCLLTAMGGSVQCWR-EEAY 308
>UNIPROTKB|Q9BRX9 [details] [associations]
symbol:WDR83 "WD repeat domain-containing protein 83"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;IDA] [GO:0000375 "RNA
splicing, via transesterification reactions" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471106 GO:GO:0000398 GO:GO:0071013 UniGene:Hs.657204
HOGENOM:HOG000091642 CTD:84292 HOVERGEN:HBG105288 KO:K13124
OrthoDB:EOG4ZCT4V OMA:CKQGAVR EMBL:AK223195 EMBL:AK314164
EMBL:BC005870 IPI:IPI00031581 RefSeq:NP_001093207.1
RefSeq:NP_115708.1 ProteinModelPortal:Q9BRX9 SMR:Q9BRX9
STRING:Q9BRX9 PhosphoSite:Q9BRX9 DMDM:74761224 PRIDE:Q9BRX9
DNASU:84292 Ensembl:ENST00000242796 Ensembl:ENST00000418543
GeneID:84292 KEGG:hsa:84292 UCSC:uc002mue.4 GeneCards:GC19P012777
HGNC:HGNC:32672 HPA:HPA042629 HPA:HPA042838 neXtProt:NX_Q9BRX9
PharmGKB:PA165394765 InParanoid:Q9BRX9 PhylomeDB:Q9BRX9
ChiTaRS:WDR83 GenomeRNAi:84292 NextBio:73931 ArrayExpress:Q9BRX9
Bgee:Q9BRX9 Genevestigator:Q9BRX9 GermOnline:ENSG00000123154
Uniprot:Q9BRX9
Length = 315
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 102/256 (39%), Positives = 155/256 (60%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
++T+DC QGA+RAVRFNVDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA +
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSF 77
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D+S + SG DK+V+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D+++ WD
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWD 137
Query: 126 VKSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+SR P+Q +++D +I GS DG++ ++ L S VG +
Sbjct: 138 CRSRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDLRMGQLFSDY---VGSPI 194
Query: 177 VNSLCSHPTRKHIMSACGNNVKLW---TAE--EDY----GQEPIVDACFT-RDCQCILTC 226
+ S + ++S+ + ++L T E +Y QE +D C + RD +++C
Sbjct: 195 TCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTH-VVSC 253
Query: 227 STDECLRLFDKATGEL 242
S D + +D G L
Sbjct: 254 SEDGKVFFWDLVEGAL 269
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 93/281 (33%), Positives = 141/281 (50%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK++ LW G +R + H +V + D+S + SG D V++WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 126 VKS-------RSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
V S R H + +Q + + + I GS D I W S+ + ++ +
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQ--FNEEATVILSGSIDSSIRCWDC--RSRRPEPVQTLDE 151
Query: 175 AVVNSLCSHPTRKH-IM--SACGN----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCS 227
A + + S H I+ S G ++++ DY PI CF+RD QC L S
Sbjct: 152 AR-DGVSSVKVSDHEILAGSVDGRVRRYDLRMGQLFSDYVGSPITCTCFSRDGQCTLVSS 210
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 287
D LRL DK TGELL EYKGHK+ +++++CCL +D+ + S DGK++ W LV+ +
Sbjct: 211 LDSTLRLLDKDTGELLGEYKGHKNQEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALA 270
Query: 288 STLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY 328
L VG VV SL HPT +++A G +V+ W EE Y
Sbjct: 271 LAL--PVGSGVVQSLAYHPTEPCLLTAMGGSVQCWR-EEAY 308
>UNIPROTKB|Q0VCN2 [details] [associations]
symbol:MORG1 "Mitogen-activated protein kinase organizer 1"
species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016301 GO:GO:0071013 GO:GO:0000375
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 CTD:84292
HOVERGEN:HBG105288 KO:K13124 OrthoDB:EOG4ZCT4V OMA:CKQGAVR
EMBL:DAAA02019387 EMBL:DAAA02019388 EMBL:BC120088 IPI:IPI00687810
RefSeq:NP_001073118.1 UniGene:Bt.64656 Ensembl:ENSBTAT00000008196
GeneID:780845 KEGG:bta:780845 InParanoid:Q0VCN2 NextBio:20924512
Uniprot:Q0VCN2
Length = 315
Score = 466 (169.1 bits), Expect = 3.1e-44, P = 3.1e-44
Identities = 101/257 (39%), Positives = 156/257 (60%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
++T+DC QGA+RAVRFNVDG+YCLTCGSDK +KLWNP R LL+TY GH +EV DA +
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSF 77
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D+S + SG DK+V+LW+V +GQ VR++R HA KV V+FNE+++V++SGS D+T+ WD
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSTIRCWD 137
Query: 126 VKSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+SR P+Q +++D ++ GS DG++ ++ L S + S
Sbjct: 138 CRSRKPEPVQTLDEARDGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVGSP---- 193
Query: 177 VNSLC-SHPTRKHIMSACGNNVKLW---TAE--EDY----GQEPIVDACFT-RDCQCILT 225
+ +C S + ++S+ + ++L T E +Y +E +D C + RD +++
Sbjct: 194 ITCICFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTH-VVS 252
Query: 226 CSTDECLRLFDKATGEL 242
CS D + +D G L
Sbjct: 253 CSEDGKVFFWDLVEGAL 269
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 91/285 (31%), Positives = 140/285 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK++ LW G +R + H +V + D+S + SG D V++WD
Sbjct: 36 DGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDAAGSFDNSSLCSGGGDKAVVLWD 95
Query: 126 VKS-------RSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
V S R H + +Q + + + I GS D I W S+ + ++ +
Sbjct: 96 VASGQVVRKFRGHAGKVNTVQ--FNEEATVILSGSIDSTIRCWDC--RSRKPEPVQTLDE 151
Query: 175 AVVNSLCSHPTRKHIM---SACGN----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCS 227
A + + S H + S G ++++ DY PI CF+RD QC L S
Sbjct: 152 AR-DGISSVKVSDHEVLAGSVDGRVRRYDLRMGQLFSDYVGSPITCICFSRDGQCTLVSS 210
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 287
D LRL DK TGELL EY GHK+ +++++CCL +D+ + S DGK++ W LV+ +
Sbjct: 211 LDSTLRLLDKDTGELLGEYTGHKNKEYKLDCCLSERDTHVVSCSEDGKVFFWDLVEGALA 270
Query: 288 STLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQAG 332
L VG VV SL HPT +++A G +++ W EE Y G
Sbjct: 271 LAL--PVGPGVVQSLTYHPTEPCLLTAMGGSIQCWR-EETYEAEG 312
>ZFIN|ZDB-GENE-040718-126 [details] [associations]
symbol:wdr83 "WD repeat domain containing 83"
species:7955 "Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040718-126 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091642
EMBL:BC076138 IPI:IPI00510406 RefSeq:NP_001002429.1
UniGene:Dr.80944 ProteinModelPortal:Q6DH44 STRING:Q6DH44
PRIDE:Q6DH44 GeneID:436702 KEGG:dre:436702 CTD:84292
HOVERGEN:HBG105288 InParanoid:Q6DH44 KO:K13124 OrthoDB:EOG4ZCT4V
NextBio:20831145 ArrayExpress:Q6DH44 Uniprot:Q6DH44
Length = 315
Score = 448 (162.8 bits), Expect = 2.5e-42, P = 2.5e-42
Identities = 102/254 (40%), Positives = 148/254 (58%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+DC+QGA+RAVRFN DG+Y LTCGSDK +KLW+ R LLKTY GH +EV DA + D
Sbjct: 19 RTVDCQQGAVRAVRFNADGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYD 78
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+SQ+ S +SDK+VILW+V +GQ R+ R HA KV CV+FNE+++V++SGS D TV WD
Sbjct: 79 NSQLCSCSSDKTVILWDVASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDT 138
Query: 127 KSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
+SR PIQ +S+D ++ GS DG++ ++ L Q+ + +G +
Sbjct: 139 RSRRMEPIQILDESQDGISSLKVSEHELLTGSVDGRVRRYDL-RMGQLQ--VDYIGSPIT 195
Query: 178 NSLCSHPTRKHIMSACGNNVKLW---TAEE--DYGQEPI----VDACFTRDCQCILTCST 228
S + + S+ + V+L T E +Y +D C T +L+CS
Sbjct: 196 CVCFSRDGQCTLSSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSE 255
Query: 229 DECLRLFDKATGEL 242
D + +D G L
Sbjct: 256 DGHVYYWDLVEGSL 269
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 97/284 (34%), Positives = 151/284 (53%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + + SDKS+ LW V+ G ++ + H +V + D+S + S S D TV++WD
Sbjct: 36 DGNYLLTCGSDKSLKLWSVSRGTLLKTYSGHGYEVLDADGSYDNSQLCSCSSDKTVILWD 95
Query: 126 VKS-------RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKW----------QLVDSSQ-- 164
V S R H + C ++++ + GS DG + W Q++D SQ
Sbjct: 96 VASGQVTRKLRGHAGKVNCVQFNEEATVMLSGSIDGTVRCWDTRSRRMEPIQILDESQDG 155
Query: 165 ISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCIL 224
IS+L S + + S+ R++ ++++ + DY PI CF+RD QC L
Sbjct: 156 ISSLKVSEHELLTGSVDGR-VRRY-------DLRMGQLQVDYIGSPITCVCFSRDGQCTL 207
Query: 225 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDS 284
+ S D +RL DK+TGE+L EY GH + ++++CCL KD+ + S DG +Y W LV+
Sbjct: 208 SSSLDSTVRLLDKSTGEMLGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEG 267
Query: 285 SQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE-ED 327
S TL VGKAVV SL HPT ++++ V++W AE ED
Sbjct: 268 SL--TLKLPVGKAVVQSLSFHPTEPRLLTSMEGRVQVWGAEPED 309
Score = 206 (77.6 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 61/206 (29%), Positives = 100/206 (48%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IA 71
G + V+FN + + L+ D ++ W+ R+ ++ E D ++ S+ +
Sbjct: 110 GKVNCVQFNEEATVMLSGSIDGTVRCWDT-RSRRMEPIQ-ILDESQDGISSLKVSEHELL 167
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
+G+ D V +++ GQ + S +TCV F+ D +S S D+TV + D +
Sbjct: 168 TGSVDGRVRRYDLRMGQLQVDYI--GSPITCVCFSRDGQCTLSSSLDSTVRLLDKSTGEM 225
Query: 129 ----RSH----HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSL 180
H + + CCL KD+ + S DG +Y W LV+ S TL VGKAVV SL
Sbjct: 226 LGEYSGHVNKGYKLDCCLTDKDTHVLSCSEDGHVYYWDLVEGSL--TLKLPVGKAVVQSL 283
Query: 181 CSHPTRKHIMSACGNNVKLWTAE-ED 205
HPT ++++ V++W AE ED
Sbjct: 284 SFHPTEPRLLTSMEGRVQVWGAEPED 309
>WB|WBGene00018014 [details] [associations]
symbol:F33G12.2 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 GO:GO:0019915 HSSP:P16649
GeneTree:ENSGT00700000104496 HOGENOM:HOG000091642 KO:K13124
OMA:CKQGAVR EMBL:FO080686 RefSeq:NP_494926.1
ProteinModelPortal:Q19986 SMR:Q19986 IntAct:Q19986 STRING:Q19986
EnsemblMetazoa:F33G12.2 GeneID:173867 KEGG:cel:CELE_F33G12.2
UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2 InParanoid:Q19986
NextBio:881457 Uniprot:Q19986
Length = 305
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 90/203 (44%), Positives = 131/203 (64%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+ IDCKQGA+RAVR+NVDG+YC+TCGSDK +KLWNP ++ LLKTY G +EV DA ++ D
Sbjct: 10 RAIDCKQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSD 69
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+SQIA+G +D++ +++V TG+ +RRWR H ++V V FNE+SSVV SGS D T+ +D
Sbjct: 70 NSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDC 129
Query: 127 KSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
+SRS PIQ +S D +I GS+DG + + D + + +G +V
Sbjct: 130 RSRSEKPIQIFNESTDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMT---VDYMGDSV- 185
Query: 178 NSLCSHPTRKHIMSAC-GNNVKL 199
NS+ P +++ G V+L
Sbjct: 186 NSVSFTPDSNCLLAGVMGGIVRL 208
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 70/278 (25%), Positives = 129/278 (46%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK+V LW ++ + ++V + D+S + +G D ++D
Sbjct: 27 DGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRACTVFD 86
Query: 126 VKSRSH------HPIQC---CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
V++ H Q + + S +F GS D + Q D S +
Sbjct: 87 VETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTM---QAFDCRSRSEKPIQIFNES 143
Query: 177 VNSLCSHPTRKH--IMSACGNNVKLWTAEE-----DYGQEPIVDACFTRDCQCILTCSTD 229
+ + S H + + N ++++ + DY + + FT D C+L
Sbjct: 144 TDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMGDSVNSVSFTPDSNCLLAGVMG 203
Query: 230 ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIST 289
+RL DK++G+LL YKGH++ +++++C + + GS DG +Y + L+DS +S
Sbjct: 204 GIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEHVASGSEDGFVYVYSLLDSHIVSK 263
Query: 290 LIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 327
L H V++SL +HP ++ +M+A G + LW AE+D
Sbjct: 264 LEHP--SKVIHSLTAHPKKERLMTAAGQMIYLWVAEDD 299
>UNIPROTKB|Q19986 [details] [associations]
symbol:F33G12.2 "Protein F33G12.2" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0019915 HSSP:P16649 GeneTree:ENSGT00700000104496
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR EMBL:FO080686
RefSeq:NP_494926.1 ProteinModelPortal:Q19986 SMR:Q19986
IntAct:Q19986 STRING:Q19986 EnsemblMetazoa:F33G12.2 GeneID:173867
KEGG:cel:CELE_F33G12.2 UCSC:F33G12.2 CTD:173867 WormBase:F33G12.2
InParanoid:Q19986 NextBio:881457 Uniprot:Q19986
Length = 305
Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
Identities = 90/203 (44%), Positives = 131/203 (64%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+ IDCKQGA+RAVR+NVDG+YC+TCGSDK +KLWNP ++ LLKTY G +EV DA ++ D
Sbjct: 10 RAIDCKQGAVRAVRYNVDGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSD 69
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+SQIA+G +D++ +++V TG+ +RRWR H ++V V FNE+SSVV SGS D T+ +D
Sbjct: 70 NSQIAAGGADRACTVFDVETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTMQAFDC 129
Query: 127 KSRSHHPIQCCLDSKDS---------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
+SRS PIQ +S D +I GS+DG + + D + + +G +V
Sbjct: 130 RSRSEKPIQIFNESTDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMT---VDYMGDSV- 185
Query: 178 NSLCSHPTRKHIMSAC-GNNVKL 199
NS+ P +++ G V+L
Sbjct: 186 NSVSFTPDSNCLLAGVMGGIVRL 208
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 70/278 (25%), Positives = 129/278 (46%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D + + SDK+V LW ++ + ++V + D+S + +G D ++D
Sbjct: 27 DGNYCVTCGSDKTVKLWNPLKSSLLKTYSGTGNEVLDAASSSDNSQIAAGGADRACTVFD 86
Query: 126 VKSRSH------HPIQC---CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
V++ H Q + + S +F GS D + Q D S +
Sbjct: 87 VETGKQLRRWRTHGAQVNAVAFNEESSVVFSGSMDCTM---QAFDCRSRSEKPIQIFNES 143
Query: 177 VNSLCSHPTRKH--IMSACGNNVKLWTAEE-----DYGQEPIVDACFTRDCQCILTCSTD 229
+ + S H + + N ++++ + DY + + FT D C+L
Sbjct: 144 TDGILSIDVNGHEIVAGSADGNYRVYSIRDGNMTVDYMGDSVNSVSFTPDSNCLLAGVMG 203
Query: 230 ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIST 289
+RL DK++G+LL YKGH++ +++++C + + GS DG +Y + L+DS +S
Sbjct: 204 GIVRLIDKSSGKLLASYKGHQNTEYKLDCRVLQSIEHVASGSEDGFVYVYSLLDSHIVSK 263
Query: 290 LIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 327
L H V++SL +HP ++ +M+A G + LW AE+D
Sbjct: 264 LEHP--SKVIHSLTAHPKKERLMTAAGQMIYLWVAEDD 299
>DICTYBASE|DDB_G0289711 [details] [associations]
symbol:morg1 "mitogen-activated protein kinase
organizer 1" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0289711 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR EMBL:AAFI02000148 HSSP:P16649 KO:K13124
RefSeq:XP_636074.1 ProteinModelPortal:Q54H44
EnsemblProtists:DDB0233741 GeneID:8627284 KEGG:ddi:DDB_G0289711
OMA:CKQGAVR Uniprot:Q54H44
Length = 325
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 97/334 (29%), Positives = 171/334 (51%)
Query: 1 MEYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND 60
++ +C + + G++ V++N DG YCL+ SDK IKL+N + ++ ++ H + + D
Sbjct: 2 VKISCNKVLSNHSGSVTVVKYNSDGGYCLSGSSDKSIKLYNVSKGSMIHSFEEHGYGIGD 61
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWRE-HASKVTCVKFNEDSSVVISGSQDN 119
+ D+ Q+ S A +K + W++ +GQ +RR++ H +T V N DS+++ SGS D
Sbjct: 62 LVSTSDNKQLFSCA-EKQLYQWDIASGQVIRRFQNAHNDTITSVCVNLDSTLLFSGSSDR 120
Query: 120 TVMMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 179
V WD++++S +P+Q D+KD+ I Q + + HS G N
Sbjct: 121 LVKAWDLRTKSINPVQILDDAKDT------ITSIIVNEQTITHNHSHGHGHSHGNNNNNQ 174
Query: 180 LCSHPTRKHIMSACGN-----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRL 234
+H ++ I S+ +V++ T PI T+D +C + TDE ++L
Sbjct: 175 PHTHTQKEVITSSVDGCIRTYDVRMGTLVTYEDTIPISSVSITKDKKCFIASCTDETVKL 234
Query: 235 FDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HS 293
D + E L+EYKGHK+ ++I C + DS I GS D Y ++L+ +S L HS
Sbjct: 235 IDIDSYETLKEYKGHKNKVYKINSCSNFDDSLIISGSEDNDFYIYELLSGKLLSKLSGHS 294
Query: 294 VGKAVVNSLCSHPTRKH-IMSACGNNVKLWTAEE 326
++ + SHP++ I S+ +++W E
Sbjct: 295 ---NIITHVDSHPSKNQFITSSTDCTIRIWDQSE 325
>TAIR|locus:2176085 [details] [associations]
symbol:AT5G64730 "AT5G64730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 KO:K13124 OMA:CKQGAVR EMBL:AY046038
EMBL:AY113956 IPI:IPI00540873 RefSeq:NP_568993.1 UniGene:At.9776
ProteinModelPortal:Q94AH2 SMR:Q94AH2 PaxDb:Q94AH2 PRIDE:Q94AH2
EnsemblPlants:AT5G64730.1 GeneID:836594 KEGG:ath:AT5G64730
TAIR:At5g64730 InParanoid:Q94AH2 PhylomeDB:Q94AH2
ProtClustDB:CLSN2690079 ArrayExpress:Q94AH2 Genevestigator:Q94AH2
Uniprot:Q94AH2
Length = 299
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 88/288 (30%), Positives = 146/288 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+GA+ A RFN DG+Y LTCG D+ I+LWNP+R +L+KTY H EV D D+++ S
Sbjct: 18 EGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCS 77
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 132
D+ V W+V+TG+ +R++R H +V VKFN+ SSVV+S D ++ +WD +S S
Sbjct: 78 CGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVE 137
Query: 133 PIQCC---LDSKDS------QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
P+Q LD+ S +I GS DG + + + ++S ++G+ V N +
Sbjct: 138 PVQIIDTFLDTVMSVVLTKTEIIGGSVDGTVRTFDMRIGREMSD---NLGQPV-NCISIS 193
Query: 184 PTRKHIMSAC-GNNVKLW---TAE--EDY----GQEPIVDACFTRDCQCILTCSTDECLR 233
+++ C + ++L T E + Y + D C T ++ S D +
Sbjct: 194 NDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVF 253
Query: 234 LFDKATGELLEEYKGHKSGDFRI-ECCLDSKDSQIFCGSSDGKIYKWQ 280
+D ++L +++ H D + K+ + S DG I W+
Sbjct: 254 FWDLVDAKVLSKFRAH---DLVVTSVSYHPKEDCMLTSSVDGTIRVWK 298
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 78/292 (26%), Positives = 126/292 (43%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
GH V A D + + D+++ LW G ++ ++ H +V V D++
Sbjct: 16 GHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKF 75
Query: 113 ISGSQDNTVMMWDV-------KSRSHHPIQCCLDSKDSQ--IFCGSSDGKIYKWQL---- 159
S D V WDV K R H + DS + D + W
Sbjct: 76 CSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHS 135
Query: 160 VDSSQI-STLIHSVGKAVVNSLCSHPTRKHIM--SACGN----NVKLWTAEEDYGQEPIV 212
V+ QI T + +V V+ T+ I+ S G ++++ D +P+
Sbjct: 136 VEPVQIIDTFLDTVMSVVL-------TKTEIIGGSVDGTVRTFDMRIGREMSDNLGQPVN 188
Query: 213 DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS 272
+ D C+L D LRL D+ TGELL+ YKGH S F+ +CCL + D+ + GS
Sbjct: 189 CISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSE 248
Query: 273 DGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIM-SACGNNVKLW 322
DG ++ W LVD+ +S H + VV S+ HP ++ S+ +++W
Sbjct: 249 DGLVFFWDLVDAKVLSKFRAHDL---VVTSVSYHPKEDCMLTSSVDGTIRVW 297
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 49/239 (20%), Positives = 91/239 (38%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R V D + +CG D+++ W+ +++ + GH EVN SS + S
Sbjct: 63 VRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGF 122
Query: 76 DKSVILWEVTTG--QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK-SRSH- 131
D+S+ +W+ + +PV+ V V + +I GS D TV +D++ R
Sbjct: 123 DRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE--IIGGSVDGTVRTFDMRIGREMS 180
Query: 132 ----HPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
P+ C S D + G D + + + K+ C +
Sbjct: 181 DNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSD 240
Query: 187 KHIMSACGNN-VKLWTAEE-----DYGQEPIV--DACFTRDCQCILTCSTDECLRLFDK 237
H++ + V W + + +V + C+LT S D +R++ K
Sbjct: 241 AHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGTIRVWKK 299
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 332 (121.9 bits), Expect = 1.3e-28, P = 1.3e-28
Identities = 104/339 (30%), Positives = 161/339 (47%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
Q+++ + G +++V F+ DG L GS+K +KLWNP LL+T GH+ V +
Sbjct: 912 QSLEGRSGWVKSVAFSPDGKK-LASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSP 970
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D Q+AS +SD ++ LW TTG+ + ++ H + V F+ D ++SGS DNT+ +WD
Sbjct: 971 DGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWD 1030
Query: 126 VK-----------SRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
+ SRS H + D D Q+ S D I W TL HS G
Sbjct: 1031 LATSELQQSLEDHSRSVHAVAFSPD--DKQLASSSLDSTIKLWDSATGELQRTLEGHSQG 1088
Query: 174 KAVVNSLCSHPTRKHIMS-ACGNNVKLW---TAEEDY---GQEPIVDA-CFTRDCQCILT 225
V S+ P K + S + +KLW T E G+ VD+ F+ D + + +
Sbjct: 1089 ---VRSVTFSPDGKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLAS 1145
Query: 226 CSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDS 284
D ++L+D ATGELL+ +GH RI+ + S D ++ GS D W +
Sbjct: 1146 GYYDSTIKLWDSATGELLQTLEGHSD---RIQSVVFSPDGKLLASGSYDQTAKLWDPA-T 1201
Query: 285 SQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW 322
++ + K V S+ P K + S+ G +KLW
Sbjct: 1202 GELLQIFEGHSKWV-ESVAFSPDGKLLASSSYGETIKLW 1239
Score = 304 (112.1 bits), Expect = 1.3e-25, P = 1.3e-25
Identities = 93/337 (27%), Positives = 160/337 (47%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
QT++ G + +V F+ DG ++ D +K+W+P LL+T GH+ V + D
Sbjct: 744 QTLENHLGPVESVVFSPDGKQLVSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPD 803
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+ASG+ D ++ LW+ TG+ ++ + H + V F D + S S D+T+ +WD+
Sbjct: 804 GKLLASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGKELASASDDSTIKIWDL 863
Query: 127 KSRSHHPIQCCLDSKDSQI--FCGSSDGKIYKWQLVDSS------QISTLIHSV-GKAV- 176
+ +Q LDS + S DGK+ +DS+ L S+ G++
Sbjct: 864 ATGE---LQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVWNPATGELQQSLEGRSGW 920
Query: 177 VNSLCSHPTRKHIMSACGNN-VKLW---TAE-----EDYGQEPIVDACFTRDCQCILTCS 227
V S+ P K + S N VKLW T E E + Q + F+ D + + + S
Sbjct: 921 VKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQS-VRSVAFSPDGKQLASSS 979
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQ 286
+D ++L++ TGEL + +KGH D I S D + + GS D I W L +S+
Sbjct: 980 SDTTIKLWNSTTGELQQTFKGH---DLWIRAVAFSPDGKHLVSGSDDNTIKLWDLA-TSE 1035
Query: 287 ISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW 322
+ + ++V +++ P K + S+ + +KLW
Sbjct: 1036 LQQSLEDHSRSV-HAVAFSPDDKQLASSSLDSTIKLW 1071
Score = 273 (101.2 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 88/338 (26%), Positives = 149/338 (44%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+QT+D G + ++ F+ DG L GS D I LW+ LL+T+ GH H + A
Sbjct: 785 LQTLDGHSGTVESLAFSPDGKL-LASGSYDNTIDLWDSATGELLQTFEGHPHSIWSVAFA 843
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D ++AS + D ++ +W++ TG+ + H+ V V F+ D ++ S S D+T+ +W
Sbjct: 844 PDGKELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDSTIKVW 903
Query: 125 D---------VKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGK 174
+ ++ RS ++ GS + W + TL HS
Sbjct: 904 NPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQTLEGHSQS- 962
Query: 175 AVVNSLCSHPTRKHIMSACGNN-VKLWTA-----EEDY-GQEPIVDA-CFTRDCQCILTC 226
V S+ P K + S+ + +KLW + ++ + G + + A F+ D + +++
Sbjct: 963 --VRSVAFSPDGKQLASSSSDTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDGKHLVSG 1020
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 286
S D ++L+D AT EL + + H + D D Q+ S D I W
Sbjct: 1021 SDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPD--DKQLASSSLDSTIKLWDSATGEL 1078
Query: 287 ISTLI-HSVGKAVVNSLCSHPTRKHIMS-ACGNNVKLW 322
TL HS G V S+ P K + S + +KLW
Sbjct: 1079 QRTLEGHSQG---VRSVTFSPDGKLLASNSYDGTIKLW 1113
Score = 199 (75.1 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 68/260 (26%), Positives = 114/260 (43%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
Q+++ ++ AV F+ D + D IKLW+ L +T GH+ V T + D
Sbjct: 1038 QSLEDHSRSVHAVAFSPDDKQLASSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPD 1097
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD- 125
+AS + D ++ LW TG+ + + V V F+ D + SG D+T+ +WD
Sbjct: 1098 GKLLASNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDSTIKLWDS 1157
Query: 126 -----VKSRSHHP--IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
+++ H IQ + S D ++ GS D W + ++ + K V
Sbjct: 1158 ATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQTAKLWDPA-TGELLQIFEGHSKWV- 1215
Query: 178 NSLCSHPTRKHIMSAC-GNNVKLW---TAEE----DYGQEPIVDACFTRDCQCILTCSTD 229
S+ P K + S+ G +KLW T E + E F+ D + +
Sbjct: 1216 ESVAFSPDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIF 1275
Query: 230 ECLRLFDKATGELLEEYKGH 249
+ +++D ATGELL+ KGH
Sbjct: 1276 DT-KIWDPATGELLQALKGH 1294
Score = 129 (50.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+QT++ I++V F+ DG L GS D+ KLW+P LL+ + GH+ V +
Sbjct: 1163 LQTLEGHSDRIQSVVFSPDGKL-LASGSYDQTAKLWDPATGELLQIFEGHSKWVESVAFS 1221
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D +AS + +++ LW+ TG+ ++ + V F+ D + + S +T +W
Sbjct: 1222 PDGKLLASSSYGETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASVDIFDT-KIW 1280
Query: 125 D 125
D
Sbjct: 1281 D 1281
>POMBASE|SPBC713.05 [details] [associations]
symbol:SPBC713.05 "WD repeat protein, human MAPK
organizer 1 (MORG1) family (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISS]
[GO:0071276 "cellular response to cadmium ion" evidence=IMP]
[GO:0071585 "detoxification of cadmium ion" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPBC713.05 GO:GO:0005829 GO:GO:0005634 GO:GO:0043234
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045292
HOGENOM:HOG000091642 KO:K13124 OMA:CKQGAVR RefSeq:NP_595344.1
ProteinModelPortal:Q9C1X0 EnsemblFungi:SPBC713.05.1 GeneID:2541181
KEGG:spo:SPBC713.05 OrthoDB:EOG4K9FNP NextBio:20802293
Uniprot:Q9C1X0
Length = 297
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 62/171 (36%), Positives = 95/171 (55%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
I V++N G Y L G+++ ++LWN + Y GH HE+ D DS++ AS
Sbjct: 17 INVVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGG 76
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK + +W+V TG+ RR H +++ +++NEDSS++ SGS D+ V +WD +S S PIQ
Sbjct: 77 DKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQ 136
Query: 136 CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNS-LCSHP 184
D+KDS S D I + +V S TL + + K ++S SHP
Sbjct: 137 VLADAKDS---VSSID--IAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHP 182
Score = 223 (83.6 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 66/254 (25%), Positives = 116/254 (45%)
Query: 70 IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 129
+A+G +++ V LW V +G + + H ++ + DS+ S D + +WDV +
Sbjct: 30 LAAG-NERVVRLWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTG 88
Query: 130 S------HH--PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSL 180
H I ++DS I GS D K+ W +S + + K V+S+
Sbjct: 89 KVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVLADAKDSVSSI 148
Query: 181 CSHPTRKHIM---SACGN----NVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLR 233
+H++ S G +++ T DY PI ++ L S + +
Sbjct: 149 ---DIAEHLIVTGSTDGTLRTYDIRKGTLSSDYFSHPITSVKTSKSASFSLISSLNSSIH 205
Query: 234 LFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS 293
L D+ TG++L+ Y G K+ ++R+ + ++ +F GS DGK+Y W L + +QI T
Sbjct: 206 LLDQETGKILKSYIGLKNMEYRVRSSFNQSETIVFSGSEDGKVYLWDLENETQI-TSTSV 264
Query: 294 VGKAVVNSLCSHPT 307
VG +V + HPT
Sbjct: 265 VGTPIVTDISCHPT 278
>FB|FBgn0040066 [details] [associations]
symbol:wds "will die slowly" species:7227 "Drosophila
melanogaster" [GO:0005671 "Ada2/Gcn5/Ada3 transcription activator
complex" evidence=IPI] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
[GO:0048188 "Set1C/COMPASS complex" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0051568 "histone H3-K4
methylation" evidence=IMP;IDA] [GO:0044665 "MLL1/2 complex"
evidence=ISS] [GO:0044666 "MLL3/4 complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005875 GO:GO:0007095 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005671
GO:GO:0048188 GO:GO:0051568 EMBL:AF233288 EMBL:AL138972
GO:GO:0044666 GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT
EMBL:AY118386 RefSeq:NP_001245503.1 RefSeq:NP_524984.1
UniGene:Dm.7137 ProteinModelPortal:Q9V3J8 SMR:Q9V3J8 IntAct:Q9V3J8
STRING:Q9V3J8 PaxDb:Q9V3J8 PRIDE:Q9V3J8 EnsemblMetazoa:FBtr0070438
EnsemblMetazoa:FBtr0308566 GeneID:53428 KEGG:dme:Dmel_CG17437
CTD:53428 FlyBase:FBgn0040066 InParanoid:Q9V3J8 OrthoDB:EOG4DNCM1
PhylomeDB:Q9V3J8 ChiTaRS:wds GenomeRNAi:53428 NextBio:841119
Bgee:Q9V3J8 GermOnline:CG17437 Uniprot:Q9V3J8
Length = 361
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 63/208 (30%), Positives = 108/208 (51%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
YT T+ A+ AV+F+ +G + + +DK IK+W Y KT GH ++D
Sbjct: 62 YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 121
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ DS + SG+ DK++ +WE++TG+ ++ + H++ V C FN S++++SGS D +V
Sbjct: 122 WSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 181
Query: 123 MWDVKSR-------SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVG 173
+WDV++ +H P+ ++D + SS DG W + TLI
Sbjct: 182 IWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-D 240
Query: 174 KAVVNSLCSHPTRKHIMSAC-GNNVKLW 200
V+ + P K+I++A N +KLW
Sbjct: 241 NPPVSFVKFSPNGKYILAATLDNTLKLW 268
Score = 216 (81.1 bits), Expect = 9.3e-16, P = 9.3e-16
Identities = 75/298 (25%), Positives = 134/298 (44%)
Query: 50 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 109
T GH V+ + + +AS ++DK + +W G+ + H ++ V ++ DS
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 110 SVVISGSQDNTVMMWDV---KS----RSH-HPIQCC-LDSKDSQIFCGSSDGKIYKWQLV 160
+++SGS D T+ +W++ KS + H + + CC + + + I GS D + W +
Sbjct: 127 RLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 161 DSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------DYGQEPI 211
+ TL HS + V+ + + S+ ++W TA D P+
Sbjct: 187 TGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 244
Query: 212 VDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCG 270
F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I + I G
Sbjct: 245 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 304
Query: 271 SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 325
S D +Y W L S ++ + V+ + C HPT I SA N +KLW ++
Sbjct: 305 SEDNMVYIWNL-QSKEVVQKLQGHTDTVLCTAC-HPTENIIASAALENDKTIKLWKSD 360
Score = 152 (58.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 34/126 (26%), Positives = 62/126 (49%)
Query: 5 CVQT-IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VND 60
C++T ID + V+F+ +G Y L D +KLW+ + LKTY GH +E +
Sbjct: 232 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFA 291
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN- 119
+ I SG+ D V +W + + + V++ + H V C + +++ S + +N
Sbjct: 292 NFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQKLQGHTDTVLCTACHPTENIIASAALEND 351
Query: 120 -TVMMW 124
T+ +W
Sbjct: 352 KTIKLW 357
>UNIPROTKB|Q0P593 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9913 "Bos taurus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BC120334 IPI:IPI00712806 RefSeq:NP_001069398.1
UniGene:Bt.25265 ProteinModelPortal:Q0P593 PRIDE:Q0P593
GeneID:530118 KEGG:bta:530118 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 InParanoid:Q0P593 OrthoDB:EOG44BB28
NextBio:20875184 Uniprot:Q0P593
Length = 415
Score = 266 (98.7 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 85/283 (30%), Positives = 130/283 (45%)
Query: 19 VRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIASGAS 75
V N GS C GS D+ KLW+ L T GH + V A A + +IA+G+
Sbjct: 98 VALNKSGS-CFITGSYDRTCKLWDTASGEELHTLEGHRNVVY-AIAFNNPYGDKIATGSF 155
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
DK+ LW V TG+ +R H +++ C+ FN S++V +GS D T +WD++S
Sbjct: 156 DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTL 215
Query: 129 --RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-H--SVGKAVVNSLCSH 183
S I ++ ++I GS D + W+ ++ TLI H + AV N CS
Sbjct: 216 TGHSAEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSL 275
Query: 184 PTRKHIMSACGNNVKLWTAEEDY------GQEP-IVDACFTRDCQCILTCSTDECLRLFD 236
+ C KLW A G + I+D+CF + I T S D R+F
Sbjct: 276 ILTGSMDKTC----KLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 237 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 279
AT E + + +GH+ +I + + +++ GSSD W
Sbjct: 332 AATRECVTKLEGHEGEISKIS--FNPQGNRLLTGSSDKTARIW 372
Score = 223 (83.6 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 76/294 (25%), Positives = 131/294 (44%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+ T++ + + A+ FN + GS DK KLW+ T+ GH E+ +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
S+ +A+G+ D + LW++ +G+ V H++++ + FN + +I+GS D+TV +W
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFNTSGNRIITGSFDHTVTVW 246
Query: 125 --DVKSRSHHPIQCCLDSKD-------SQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGK 174
D + + I C + S I GS D W V+ ++TL H
Sbjct: 247 EADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD--D 304
Query: 175 AVVNSLCSHPTRKHIMSACGNNV-KLWTAEEDY------GQE-PIVDACFTRDCQCILTC 226
+++S C T K I +A + ++++A G E I F +LT
Sbjct: 305 EILDS-CFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRLLTG 363
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 280
S+D+ R++D TG+ L+ +GH F C + K I GS D W+
Sbjct: 364 SSDKTARIWDAQTGQCLQVLEGHTDEIF--SCAFNYKGDIIITGSKDNTCRIWR 415
Score = 178 (67.7 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 63/299 (21%), Positives = 123/299 (41%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L K H + + S +G+ D++ LW+ +G+ + H + V + FN
Sbjct: 84 LFKVLRAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 107 ED-SSVVISGSQDNTVMMWDVKS-RSHHPIQ------CCL--DSKDSQIFCGSSDGKIYK 156
+ +GS D T +W V++ + +H + CL + + + + GS D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 157 WQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDYGQEPIVDA 214
W + ++ TL HS A + SL + + I++ + V +W A+ ++
Sbjct: 204 WDIQSGEEVFTLTGHS---AEIISLSFNTSGNRIITGSFDHTVTVWEADTGRKVYTLIGH 260
Query: 215 C-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQI 267
C F DC ILT S D+ +L+D G+ + GH D ++ C D I
Sbjct: 261 CAEISSAVFNWDCSLILTGSMDKTCKLWDAVNGKCVATLTGHD--DEILDSCFDYTGKLI 318
Query: 268 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 325
S+DG + ++ L G+ ++ + +P +++ + ++W A+
Sbjct: 319 ATASADGTARIFSAATRECVTKLEGHEGE--ISKISFNPQGNRLLTGSSDKTARIWDAQ 375
Score = 170 (64.9 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 62/254 (24%), Positives = 99/254 (38%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C T I + FN + T D KLW+ + T GH+ E+ +
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQSGEEVFTLTGHSAEIISLSFN 228
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++I +G+ D +V +WE TG+ V H ++++ FN D S++++GS D T +W
Sbjct: 229 TSGNRIITGSFDHTVTVWEADTGRKVYTLIGHCAEISSAVFNWDCSLILTGSMDKTCKLW 288
Query: 125 DVKSRSHHPIQCCLDSKDSQIF--CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
D + L D +I C GK+ D + + + + + V L
Sbjct: 289 DAVNGK---CVATLTGHDDEILDSCFDYTGKLIATASADGT--ARIFSAATRECVTKLEG 343
Query: 183 HPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL 242
H +S +L T D I DA T C +L TDE G++
Sbjct: 344 HEGEISKISFNPQGNRLLTGSSDKTAR-IWDAQ-TGQCLQVLEGHTDEIFSCAFNYKGDI 401
Query: 243 LEEYKGHKSGDFRI 256
+ G K RI
Sbjct: 402 I--ITGSKDNTCRI 413
Score = 140 (54.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 29/120 (24%), Positives = 57/120 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV T+ I F+ G T +D ++++ + GH E++ +
Sbjct: 295 CVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFN 354
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+++ +G+SDK+ +W+ TGQ ++ H ++ FN ++I+GS+DNT +W
Sbjct: 355 PQGNRLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGDIIITGSKDNTCRIW 414
>UNIPROTKB|Q5M786 [details] [associations]
symbol:wdr5 "WD repeat-containing protein 5" species:8364
"Xenopus (Silurana) tropicalis" [GO:0000123 "histone
acetyltransferase complex" evidence=ISS] [GO:0034968 "histone
lysine methylation" evidence=ISS] [GO:0035064 "methylated histone
residue binding" evidence=ISS] [GO:0043981 "histone H4-K5
acetylation" evidence=ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=ISS]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035064
GO:GO:0034968 GO:GO:0071339 GO:GO:0000123 GO:GO:0043981
GO:GO:0043982 GO:GO:0043984 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:CR761006
EMBL:BC088786 RefSeq:NP_001011411.1 UniGene:Str.64944
UniGene:Str.65618 ProteinModelPortal:Q5M786 SMR:Q5M786
STRING:Q5M786 Ensembl:ENSXETT00000042368 GeneID:496891
KEGG:xtr:496891 Xenbase:XB-GENE-493883 InParanoid:Q5M786
OMA:LWDLQTK Bgee:Q5M786 Uniprot:Q5M786
Length = 334
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 66/233 (28%), Positives = 116/233 (49%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
YT T+ A+ +V+F+ +G + + +DK IK+W Y KT GH ++D
Sbjct: 35 YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVA 94
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ DS+ + S + DK++ +W+V++G+ ++ + H++ V C FN S++++SGS D +V
Sbjct: 95 WSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR 154
Query: 123 MWDVKSR-------SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVG 173
+WDVK+ +H P+ ++D + SS DG W + TLI
Sbjct: 155 IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-D 213
Query: 174 KAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDYGQEPIVDA--CFTRDCQCI 223
V+ + P K+I++A N +KLW DY + + C + CI
Sbjct: 214 NPPVSFVKFSPNGKYILAATLDNTLKLW----DYSKGKCLKTYTCHKNEKYCI 262
Score = 217 (81.4 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 73/298 (24%), Positives = 133/298 (44%)
Query: 50 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 109
T GH V+ + + +AS ++DK + +W G+ + H ++ V ++ DS
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 110 SVVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKIYKWQLV 160
++++S S D T+ +WDV S + H + + CC + + + I GS D + W +
Sbjct: 100 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 161 DSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------DYGQEPI 211
+ TL HS + V+ + + S+ ++W TA D P+
Sbjct: 160 TGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPV 217
Query: 212 VDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCG 270
F+ + + IL + D L+L+D + G+ L+ Y HK+ + I + I G
Sbjct: 218 SFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFANFSVTGGKWIVSG 277
Query: 271 SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 325
S D +Y W L + ++ + V+++ C HPT I SA N +KLW ++
Sbjct: 278 SEDNLVYIWNL-QTKEVVQKLQGHTDVVISTAC-HPTENIIASAALENDKTIKLWKSD 333
Score = 135 (52.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 5 CVQT-IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VND 60
C++T ID + V+F+ +G Y L D +KLW+ + LKTY H +E +
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTCHKNEKYCIFA 264
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN- 119
+ I SG+ D V +W + T + V++ + H V + +++ S + +N
Sbjct: 265 NFSVTGGKWIVSGSEDNLVYIWNLQTKEVVQKLQGHTDVVISTACHPTENIIASAALEND 324
Query: 120 -TVMMW 124
T+ +W
Sbjct: 325 KTIKLW 330
>UNIPROTKB|G3N3E5 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 OMA:KLWKSDT EMBL:DAAA02032365
Ensembl:ENSBTAT00000066090 Uniprot:G3N3E5
Length = 308
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+ +V+F+ +G + + +DK IK+W Y KT GH ++D + DS+ + S +
Sbjct: 21 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS 80
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 129
DK++ +W+V++G+ ++ + H++ V C FN S++++SGS D +V +WDVK+
Sbjct: 81 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 140
Query: 130 --SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+H P+ ++D + SS DG W + TLI V+ + P
Sbjct: 141 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPN 199
Query: 186 RKHIMSAC-GNNVKLW 200
K+I++A N +KLW
Sbjct: 200 GKYILAATLDNTLKLW 215
Score = 194 (73.4 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 70/295 (23%), Positives = 128/295 (43%)
Query: 45 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
N LK T GH V+ + + +AS ++DK + +W G+ + H ++ V
Sbjct: 8 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 67
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKI 154
++ DS++++S S D T+ +WDV S + H + + CC + + + I GS D +
Sbjct: 68 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 127
Query: 155 YKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------D 205
W + + TL HS + V+ + + S+ ++W TA D
Sbjct: 128 RIWDVKTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 185
Query: 206 YGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I
Sbjct: 186 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 245
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 320
+ S+ + + + +I + V+++ C HPT I SA N K
Sbjct: 246 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 299
Score = 185 (70.2 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 51/188 (27%), Positives = 93/188 (49%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+TI + I V ++ D + ++ DK +K+W+ LKT GH++ V
Sbjct: 55 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 114
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+ I SG+ D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD
Sbjct: 115 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD- 173
Query: 127 KSRSHHPIQCCLDSKDSQI-FCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ S ++ +D + + F S +GK +D++ + +S GK + + H
Sbjct: 174 -TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCL-KTYTGHK 230
Query: 185 TRKHIMSA 192
K+ + A
Sbjct: 231 NEKYCIFA 238
Score = 177 (67.4 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ + FN + ++ D+ +++W+ LKT H+ V+
Sbjct: 95 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 154
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMM 123
D S I S + D +W+ +GQ ++ + + V+ VKF+ + +++ + DNT+ +
Sbjct: 155 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 214
Query: 124 WD------VKSRSHHPIQ-CCLDSKDSQ-----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
WD +K+ + H + C+ + S I GS D +Y W L + +I +
Sbjct: 215 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL-QTKEIVQKLQG 273
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 203
V+++ C HPT I SA N +KLW ++
Sbjct: 274 HTDVVISTAC-HPTENIIASAALENDKTIKLWKSD 307
>UNIPROTKB|Q2KIG2 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9913
"Bos taurus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISS] [GO:0035064 "methylated histone residue binding"
evidence=ISS] [GO:0046972 "histone acetyltransferase activity
(H4-K16 specific)" evidence=ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISS]
[GO:0043995 "histone acetyltransferase activity (H4-K5 specific)"
evidence=ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISS] [GO:0043982 "histone H4-K8 acetylation" evidence=ISS]
[GO:0043981 "histone H4-K5 acetylation" evidence=ISS] [GO:0048188
"Set1C/COMPASS complex" evidence=ISS] [GO:0035097 "histone
methyltransferase complex" evidence=ISS] [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0035064 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 HSSP:P61964
KO:K14963 HOVERGEN:HBG055117 EMBL:BC112650 IPI:IPI00711741
RefSeq:NP_001098945.1 UniGene:Bt.39594 ProteinModelPortal:Q2KIG2
SMR:Q2KIG2 GeneID:100125836 KEGG:bta:100125836 CTD:11091
NextBio:20788854 Uniprot:Q2KIG2
Length = 334
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+ +V+F+ +G + + +DK IK+W Y KT GH ++D + DS+ + S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS 106
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 129
DK++ +W+V++G+ ++ + H++ V C FN S++++SGS D +V +WDVK+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 130 --SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+H P+ ++D + SS DG W + TLI V+ + P
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPN 225
Query: 186 RKHIMSAC-GNNVKLW 200
K+I++A N +KLW
Sbjct: 226 GKYILAATLDNTLKLW 241
Score = 194 (73.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 70/295 (23%), Positives = 128/295 (43%)
Query: 45 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
N LK T GH V+ + + +AS ++DK + +W G+ + H ++ V
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKI 154
++ DS++++S S D T+ +WDV S + H + + CC + + + I GS D +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 153
Query: 155 YKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------D 205
W + + TL HS + V+ + + S+ ++W TA D
Sbjct: 154 RIWDVKTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 206 YGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 320
+ S+ + + + +I + V+++ C HPT I SA N K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Score = 185 (70.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 51/188 (27%), Positives = 93/188 (49%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+TI + I V ++ D + ++ DK +K+W+ LKT GH++ V
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+ I SG+ D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD- 199
Query: 127 KSRSHHPIQCCLDSKDSQI-FCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ S ++ +D + + F S +GK +D++ + +S GK + + H
Sbjct: 200 -TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCL-KTYTGHK 256
Query: 185 TRKHIMSA 192
K+ + A
Sbjct: 257 NEKYCIFA 264
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ + FN + ++ D+ +++W+ LKT H+ V+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMM 123
D S I S + D +W+ +GQ ++ + + V+ VKF+ + +++ + DNT+ +
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 124 WD------VKSRSHHPIQ-CCLDSKDSQ-----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
WD +K+ + H + C+ + S I GS D +Y W L + +I +
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL-QTKEIVQKLQG 299
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 203
V+++ C HPT I SA N +KLW ++
Sbjct: 300 HTDVVISTAC-HPTENIIASAALENDKTIKLWKSD 333
>UNIPROTKB|P61964 [details] [associations]
symbol:WDR5 "WD repeat-containing protein 5" species:9606
"Homo sapiens" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0001501 "skeletal system
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048188 "Set1C/COMPASS complex" evidence=IDA]
[GO:0035097 "histone methyltransferase complex" evidence=IDA]
[GO:0051568 "histone H3-K4 methylation" evidence=IDA] [GO:0071339
"MLL1 complex" evidence=IDA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IDA] [GO:0043984 "histone
H4-K16 acetylation" evidence=IDA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IDA]
[GO:0000123 "histone acetyltransferase complex" evidence=IDA]
[GO:0043981 "histone H4-K5 acetylation" evidence=IDA] [GO:0043995
"histone acetyltransferase activity (H4-K5 specific)" evidence=IDA]
[GO:0043982 "histone H4-K8 acetylation" evidence=IDA] [GO:0043996
"histone acetyltransferase activity (H4-K8 specific)" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043966 "histone H3
acetylation" evidence=IDA] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0048188 GO:GO:0051568 GO:GO:0071339
Pathway_Interaction_DB:circadianpathway GO:GO:0043966 GO:GO:0043981
GO:GO:0043982 PDB:4A7J PDBsum:4A7J GO:GO:0043984 PDB:3EG6 PDB:3EMH
PDB:3P4F PDB:4ESG PDBsum:3EG6 PDBsum:3EMH PDBsum:3P4F PDBsum:4ESG
PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ PDB:3UVL PDB:4ERY
PDBsum:3UVL PDBsum:4ERY PDB:3UVM PDB:4ERZ PDBsum:3UVM PDBsum:4ERZ
PDB:3UVN PDB:4EWR PDBsum:3UVN PDBsum:4EWR PDB:3UVO PDB:4ES0
PDBsum:3UVO PDBsum:4ES0 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 EMBL:AJ011376 EMBL:AK000552
EMBL:BC001635 IPI:IPI00005492 RefSeq:NP_060058.1 RefSeq:NP_438172.1
UniGene:Hs.397638 PDB:2CNX PDB:2CO0 PDB:2G99 PDB:2G9A PDB:2GNQ
PDB:2H13 PDB:2H14 PDB:2H68 PDB:2H6K PDB:2H6N PDB:2H6Q PDB:2H9L
PDB:2H9M PDB:2H9N PDB:2H9P PDB:2O9K PDB:3MXX PDB:3N0D PDB:3N0E
PDB:3PSL PDB:3SMR PDB:3UR4 PDB:4IA9 PDBsum:2CNX PDBsum:2CO0
PDBsum:2G99 PDBsum:2G9A PDBsum:2GNQ PDBsum:2H13 PDBsum:2H14
PDBsum:2H68 PDBsum:2H6K PDBsum:2H6N PDBsum:2H6Q PDBsum:2H9L
PDBsum:2H9M PDBsum:2H9N PDBsum:2H9P PDBsum:2O9K PDBsum:3MXX
PDBsum:3N0D PDBsum:3N0E PDBsum:3PSL PDBsum:3SMR PDBsum:3UR4
PDBsum:4IA9 ProteinModelPortal:P61964 SMR:P61964 DIP:DIP-29223N
IntAct:P61964 MINT:MINT-1464227 STRING:P61964 PhosphoSite:P61964
DMDM:48429182 PaxDb:P61964 PRIDE:P61964 DNASU:11091
Ensembl:ENST00000358625 Ensembl:ENST00000425041 GeneID:11091
KEGG:hsa:11091 UCSC:uc004cey.3 GeneCards:GC09P137001
HGNC:HGNC:12757 MIM:609012 neXtProt:NX_P61964 PharmGKB:PA37361
InParanoid:P61964 OrthoDB:EOG4QVCCF PhylomeDB:P61964
BindingDB:P61964 ChEMBL:CHEMBL1075317 EvolutionaryTrace:P61964
GenomeRNAi:11091 NextBio:42156 Bgee:P61964 CleanEx:HS_WDR5
Genevestigator:P61964 GermOnline:ENSG00000196363 Uniprot:P61964
Length = 334
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+ +V+F+ +G + + +DK IK+W Y KT GH ++D + DS+ + S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS 106
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 129
DK++ +W+V++G+ ++ + H++ V C FN S++++SGS D +V +WDVK+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 130 --SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+H P+ ++D + SS DG W + TLI V+ + P
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPN 225
Query: 186 RKHIMSAC-GNNVKLW 200
K+I++A N +KLW
Sbjct: 226 GKYILAATLDNTLKLW 241
Score = 194 (73.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 70/295 (23%), Positives = 128/295 (43%)
Query: 45 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
N LK T GH V+ + + +AS ++DK + +W G+ + H ++ V
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKI 154
++ DS++++S S D T+ +WDV S + H + + CC + + + I GS D +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 153
Query: 155 YKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------D 205
W + + TL HS + V+ + + S+ ++W TA D
Sbjct: 154 RIWDVKTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 206 YGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 320
+ S+ + + + +I + V+++ C HPT I SA N K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Score = 185 (70.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 51/188 (27%), Positives = 93/188 (49%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+TI + I V ++ D + ++ DK +K+W+ LKT GH++ V
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+ I SG+ D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD- 199
Query: 127 KSRSHHPIQCCLDSKDSQI-FCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ S ++ +D + + F S +GK +D++ + +S GK + + H
Sbjct: 200 -TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCL-KTYTGHK 256
Query: 185 TRKHIMSA 192
K+ + A
Sbjct: 257 NEKYCIFA 264
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ + FN + ++ D+ +++W+ LKT H+ V+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMM 123
D S I S + D +W+ +GQ ++ + + V+ VKF+ + +++ + DNT+ +
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 124 WD------VKSRSHHPIQ-CCLDSKDSQ-----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
WD +K+ + H + C+ + S I GS D +Y W L + +I +
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL-QTKEIVQKLQG 299
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 203
V+++ C HPT I SA N +KLW ++
Sbjct: 300 HTDVVISTAC-HPTENIIASAALENDKTIKLWKSD 333
>UNIPROTKB|F1S034 [details] [associations]
symbol:WDR5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0046972 "histone
acetyltransferase activity (H4-K16 specific)" evidence=IEA]
[GO:0043996 "histone acetyltransferase activity (H4-K8 specific)"
evidence=IEA] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0042800 "histone methyltransferase
activity (H3-K4 specific)" evidence=IEA] [GO:0005671
"Ada2/Gcn5/Ada3 transcription activator complex" evidence=IEA]
[GO:0001501 "skeletal system development" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0001501
GO:GO:0005671 GO:GO:0042800 GO:GO:0048188 GO:GO:0071339
GO:GO:0043966 GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 KO:K14963 OMA:KLWKSDT CTD:11091
EMBL:CU571409 RefSeq:XP_003353752.1 UniGene:Ssc.82589
Ensembl:ENSSSCT00000023586 GeneID:100156729 KEGG:ssc:100156729
Uniprot:F1S034
Length = 334
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+ +V+F+ +G + + +DK IK+W Y KT GH ++D + DS+ + S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS 106
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 129
DK++ +W+V++G+ ++ + H++ V C FN S++++SGS D +V +WDVK+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 130 --SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+H P+ ++D + SS DG W + TLI V+ + P
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPN 225
Query: 186 RKHIMSAC-GNNVKLW 200
K+I++A N +KLW
Sbjct: 226 GKYILAATLDNTLKLW 241
Score = 194 (73.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 70/295 (23%), Positives = 128/295 (43%)
Query: 45 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
N LK T GH V+ + + +AS ++DK + +W G+ + H ++ V
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKI 154
++ DS++++S S D T+ +WDV S + H + + CC + + + I GS D +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 153
Query: 155 YKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------D 205
W + + TL HS + V+ + + S+ ++W TA D
Sbjct: 154 RIWDVKTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 206 YGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 320
+ S+ + + + +I + V+++ C HPT I SA N K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Score = 185 (70.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 51/188 (27%), Positives = 93/188 (49%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+TI + I V ++ D + ++ DK +K+W+ LKT GH++ V
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+ I SG+ D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD- 199
Query: 127 KSRSHHPIQCCLDSKDSQI-FCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ S ++ +D + + F S +GK +D++ + +S GK + + H
Sbjct: 200 -TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCL-KTYTGHK 256
Query: 185 TRKHIMSA 192
K+ + A
Sbjct: 257 NEKYCIFA 264
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ + FN + ++ D+ +++W+ LKT H+ V+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMM 123
D S I S + D +W+ +GQ ++ + + V+ VKF+ + +++ + DNT+ +
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 124 WD------VKSRSHHPIQ-CCLDSKDSQ-----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
WD +K+ + H + C+ + S I GS D +Y W L + +I +
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL-QTKEIVQKLQG 299
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 203
V+++ C HPT I SA N +KLW ++
Sbjct: 300 HTDVVISTAC-HPTENIIASAALENDKTIKLWKSD 333
>MGI|MGI:2155884 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10090 "Mus
musculus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO] [GO:0001501 "skeletal system development"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005671 "Ada2/Gcn5/Ada3 transcription
activator complex" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0035097 "histone methyltransferase
complex" evidence=ISO] [GO:0043966 "histone H3 acetylation"
evidence=ISO] [GO:0043981 "histone H4-K5 acetylation" evidence=ISO]
[GO:0043982 "histone H4-K8 acetylation" evidence=ISO] [GO:0043984
"histone H4-K16 acetylation" evidence=ISO] [GO:0048188
"Set1C/COMPASS complex" evidence=ISO] [GO:0051568 "histone H3-K4
methylation" evidence=ISO] [GO:0071339 "MLL1 complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2155884 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0035097
GO:GO:0000123 GO:GO:0043981 GO:GO:0043982 GO:GO:0043984
GO:GO:0046972 GO:GO:0043995 GO:GO:0043996
GeneTree:ENSGT00690000101787 PDB:2XL2 PDB:2XL3 PDBsum:2XL2
PDBsum:2XL3 KO:K14963 HOGENOM:HOG000091642 OMA:KLWKSDT
HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF EMBL:AF416510
EMBL:AK075937 EMBL:BC008547 EMBL:BC016103 EMBL:BC025801
IPI:IPI00139957 RefSeq:NP_543124.1 UniGene:Mm.28265
ProteinModelPortal:P61965 SMR:P61965 IntAct:P61965 STRING:P61965
PhosphoSite:P61965 PaxDb:P61965 PRIDE:P61965
Ensembl:ENSMUST00000113952 GeneID:140858 KEGG:mmu:140858
BindingDB:P61965 EvolutionaryTrace:P61965 NextBio:370017
Bgee:P61965 CleanEx:MM_WDR5 Genevestigator:P61965
GermOnline:ENSMUSG00000026917 Uniprot:P61965
Length = 334
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+ +V+F+ +G + + +DK IK+W Y KT GH ++D + DS+ + S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS 106
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 129
DK++ +W+V++G+ ++ + H++ V C FN S++++SGS D +V +WDVK+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 130 --SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+H P+ ++D + SS DG W + TLI V+ + P
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPN 225
Query: 186 RKHIMSAC-GNNVKLW 200
K+I++A N +KLW
Sbjct: 226 GKYILAATLDNTLKLW 241
Score = 194 (73.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 70/295 (23%), Positives = 128/295 (43%)
Query: 45 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
N LK T GH V+ + + +AS ++DK + +W G+ + H ++ V
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKI 154
++ DS++++S S D T+ +WDV S + H + + CC + + + I GS D +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 153
Query: 155 YKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------D 205
W + + TL HS + V+ + + S+ ++W TA D
Sbjct: 154 RIWDVKTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 206 YGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 320
+ S+ + + + +I + V+++ C HPT I SA N K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Score = 185 (70.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 51/188 (27%), Positives = 93/188 (49%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+TI + I V ++ D + ++ DK +K+W+ LKT GH++ V
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+ I SG+ D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD- 199
Query: 127 KSRSHHPIQCCLDSKDSQI-FCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ S ++ +D + + F S +GK +D++ + +S GK + + H
Sbjct: 200 -TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCL-KTYTGHK 256
Query: 185 TRKHIMSA 192
K+ + A
Sbjct: 257 NEKYCIFA 264
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ + FN + ++ D+ +++W+ LKT H+ V+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMM 123
D S I S + D +W+ +GQ ++ + + V+ VKF+ + +++ + DNT+ +
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 124 WD------VKSRSHHPIQ-CCLDSKDSQ-----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
WD +K+ + H + C+ + S I GS D +Y W L + +I +
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL-QTKEIVQKLQG 299
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 203
V+++ C HPT I SA N +KLW ++
Sbjct: 300 HTDVVISTAC-HPTENIIASAALENDKTIKLWKSD 333
>RGD|1305159 [details] [associations]
symbol:Wdr5 "WD repeat domain 5" species:10116 "Rattus
norvegicus" [GO:0000123 "histone acetyltransferase complex"
evidence=ISO;ISS] [GO:0001501 "skeletal system development"
evidence=IEA;ISO] [GO:0005622 "intracellular" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005671 "Ada2/Gcn5/Ada3
transcription activator complex" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0034968 "histone lysine methylation" evidence=ISS] [GO:0035064
"methylated histone residue binding" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=ISO;ISS] [GO:0042800
"histone methyltransferase activity (H3-K4 specific)"
evidence=IEA;ISO] [GO:0043966 "histone H3 acetylation"
evidence=IEA;ISO] [GO:0043981 "histone H4-K5 acetylation"
evidence=ISO;ISS] [GO:0043982 "histone H4-K8 acetylation"
evidence=ISO;ISS] [GO:0043984 "histone H4-K16 acetylation"
evidence=ISO;ISS] [GO:0043995 "histone acetyltransferase activity
(H4-K5 specific)" evidence=ISO;ISS] [GO:0043996 "histone
acetyltransferase activity (H4-K8 specific)" evidence=ISO;ISS]
[GO:0046972 "histone acetyltransferase activity (H4-K16 specific)"
evidence=ISO;ISS] [GO:0048188 "Set1C/COMPASS complex"
evidence=ISO;ISS] [GO:0051568 "histone H3-K4 methylation"
evidence=ISO;ISS] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305159 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0001501
GO:GO:0005671 GO:GO:0035064 GO:GO:0042800 GO:GO:0048188
GO:GO:0051568 GO:GO:0071339 GO:GO:0043966 GO:GO:0000123
GO:GO:0043981 GO:GO:0043982 GO:GO:0043984 GO:GO:0046972
GO:GO:0043995 GO:GO:0043996 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT HOVERGEN:HBG055117 CTD:11091 OrthoDB:EOG4QVCCF
EMBL:BC100156 IPI:IPI00373481 RefSeq:NP_001034123.1
UniGene:Rn.106818 ProteinModelPortal:Q498M4 SMR:Q498M4
IntAct:Q498M4 STRING:Q498M4 PRIDE:Q498M4 Ensembl:ENSRNOT00000011556
GeneID:362093 KEGG:rno:362093 UCSC:RGD:1305159 InParanoid:Q498M4
BindingDB:Q498M4 NextBio:678628 Genevestigator:Q498M4
Uniprot:Q498M4
Length = 334
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/196 (29%), Positives = 104/196 (53%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+ +V+F+ +G + + +DK IK+W Y KT GH ++D + DS+ + S +
Sbjct: 47 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS 106
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 129
DK++ +W+V++G+ ++ + H++ V C FN S++++SGS D +V +WDVK+
Sbjct: 107 DDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 166
Query: 130 --SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+H P+ ++D + SS DG W + TLI V+ + P
Sbjct: 167 LPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPN 225
Query: 186 RKHIMSAC-GNNVKLW 200
K+I++A N +KLW
Sbjct: 226 GKYILAATLDNTLKLW 241
Score = 194 (73.4 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 70/295 (23%), Positives = 128/295 (43%)
Query: 45 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
N LK T GH V+ + + +AS ++DK + +W G+ + H ++ V
Sbjct: 34 NYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDV 93
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKI 154
++ DS++++S S D T+ +WDV S + H + + CC + + + I GS D +
Sbjct: 94 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 153
Query: 155 YKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW-TAEE-------D 205
W + + TL HS + V+ + + S+ ++W TA D
Sbjct: 154 RIWDVKTGKCLKTLPAHSDPVSAVHF--NRDGSLIVSSSYDGLCRIWDTASGQCLKTLID 211
Query: 206 YGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
P+ F+ + + IL + D L+L+D + G+ L+ Y GHK+ + I
Sbjct: 212 DDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 271
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 320
+ S+ + + + +I + V+++ C HPT I SA N K
Sbjct: 272 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTAC-HPTENIIASAALENDK 325
Score = 185 (70.2 bits), Expect = 4.1e-12, P = 4.1e-12
Identities = 51/188 (27%), Positives = 93/188 (49%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+TI + I V ++ D + ++ DK +K+W+ LKT GH++ V
Sbjct: 81 KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ 140
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+ I SG+ D+SV +W+V TG+ ++ H+ V+ V FN D S+++S S D +WD
Sbjct: 141 SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD- 199
Query: 127 KSRSHHPIQCCLDSKDSQI-FCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ S ++ +D + + F S +GK +D++ + +S GK + + H
Sbjct: 200 -TASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCL-KTYTGHK 256
Query: 185 TRKHIMSA 192
K+ + A
Sbjct: 257 NEKYCIFA 264
Score = 177 (67.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 52/215 (24%), Positives = 99/215 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ + FN + ++ D+ +++W+ LKT H+ V+
Sbjct: 121 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFN 180
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMM 123
D S I S + D +W+ +GQ ++ + + V+ VKF+ + +++ + DNT+ +
Sbjct: 181 RDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKL 240
Query: 124 WD------VKSRSHHPIQ-CCLDSKDSQ-----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
WD +K+ + H + C+ + S I GS D +Y W L + +I +
Sbjct: 241 WDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNL-QTKEIVQKLQG 299
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 203
V+++ C HPT I SA N +KLW ++
Sbjct: 300 HTDVVISTAC-HPTENIIASAALENDKTIKLWKSD 333
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 68/216 (31%), Positives = 109/216 (50%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y + TI+ +I AV+F+ G + T +DK +K+WN +T GH VND
Sbjct: 69 YKLISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFA 128
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ DS I + + DK++ ++EV T + + + H + V C FN SS+V+SGS D +V
Sbjct: 129 WSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVR 188
Query: 123 MWDVKSR-------SHH-PIQCCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 173
+WDV++ +H P+ ++D S I GS DG + W + + TL+
Sbjct: 189 IWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDEN 248
Query: 174 KAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEEDYGQ 208
V S P K+I+S+ N +KLW D+G+
Sbjct: 249 PPVAFVKFS-PNGKYILSSNLDNTLKLW----DFGK 279
Score = 200 (75.5 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 73/303 (24%), Positives = 138/303 (45%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L+ T GH ++ + + + ++DK+V +W ++ R H V ++
Sbjct: 71 LISTIEGHTKSISAVKFSPCGKFLGTSSADKTVKIWNMSDLSCERTLTGHKLGVNDFAWS 130
Query: 107 EDSSVVISGSQDNTVMMWDV------KSRSHHP--IQCC-LDSKDSQIFCGSSDGKIYKW 157
DS +++ S D T+ +++V K+ H + CC + + S + GS D + W
Sbjct: 131 ADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRIW 190
Query: 158 QLVDSSQISTL-IHSVGKAVVN-----SLCSHPTRKHIM----SACGNNVKLWTAEEDYG 207
+ + TL HS + V+ SL + + ++ +A G VK +E+
Sbjct: 191 DVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDEN-- 248
Query: 208 QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ- 266
P+ F+ + + IL+ + D L+L+D G+ L++Y+GH++ + I +
Sbjct: 249 -PPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFANFSVTGGKW 307
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSAC---GNNVKLW 322
I GS D KIY W L + +L H+ +AV+ S C HP + I S N +++W
Sbjct: 308 IISGSEDCKIYVWNLQTKEVVQSLEGHT--QAVIASDC-HPMQNMIASGALEPDNTIRIW 364
Query: 323 TAE 325
++
Sbjct: 365 RSD 367
Score = 178 (67.7 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 38/124 (30%), Positives = 63/124 (50%)
Query: 2 EYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDA 61
+ +C +T+ + + ++ D +T DK +K++ + KT GH + V
Sbjct: 110 DLSCERTLTGHKLGVNDFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCC 169
Query: 62 TAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
SS + SG+ D+SV +W+V TG V+ H+ V+ V FN D S++ SGS D V
Sbjct: 170 NFNPQSSLVVSGSFDESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDGLV 229
Query: 122 MMWD 125
+WD
Sbjct: 230 RIWD 233
Score = 135 (52.6 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 33/126 (26%), Positives = 60/126 (47%)
Query: 5 CVQT-IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VND 60
CV+T +D + + V+F+ +G Y L+ D +KLW+ + LK Y GH + +
Sbjct: 239 CVKTLVDDENPPVAFVKFSPNGKYILSSNLDNTLKLWDFGKGKTLKQYQGHENNKYCIFA 298
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS--QD 118
+ I SG+ D + +W + T + V+ H V + +++ SG+ D
Sbjct: 299 NFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQNMIASGALEPD 358
Query: 119 NTVMMW 124
NT+ +W
Sbjct: 359 NTIRIW 364
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 258 (95.9 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 76/299 (25%), Positives = 140/299 (46%)
Query: 50 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 109
T GH+ ++ + + +AS A+D +I+W G + H+ +++ V ++ DS
Sbjct: 34 TLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDS 93
Query: 110 SVVISGSQDNTVMMWDVKS-------RSHHP-IQCC-LDSKDSQIFCGSSDGKIYKWQLV 160
S ++S S D T+ +WD++S + H + CC + + I GS D + W++
Sbjct: 94 SRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVK 153
Query: 161 DSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAEE--------DYGQEP 210
+ TL HS + VN C+ I+S + + ++W A D G P
Sbjct: 154 TGKCLKTLSAHSDPISAVNFNCNGSL---IVSGSYDGLCRIWDAASGQCLRTLADEGNPP 210
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFC 269
+ F+ + + ILT + D L+L+D + G L+ Y GHK+ + + + +
Sbjct: 211 VSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVS 270
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN---VKLWTAE 325
GS D +Y W L + +I + V+++ C HPT+ I SA N +K+W+++
Sbjct: 271 GSEDNMVYIWNL-QTKEIVQRLQGHTDVVISAAC-HPTKNIIASAALENDKTIKVWSSD 327
Score = 247 (92.0 bits), Expect = 4.9e-21, P = 4.9e-21
Identities = 62/208 (29%), Positives = 105/208 (50%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y T+ AI +V+F+ +G + + +D I +W Y KT GH+ E++D
Sbjct: 29 YALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVA 88
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ DSS++ S + DK++ +W++ +G+ ++ + H+ V C FN S++++SGS D +V
Sbjct: 89 WSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVK 148
Query: 123 MWDVKSR------SHH--PIQCC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 173
+W+VK+ S H PI + S I GS DG W + TL G
Sbjct: 149 IWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADE-G 207
Query: 174 KAVVNSLCSHPTRKHIMSAC-GNNVKLW 200
V+ + P K+I++A N +KLW
Sbjct: 208 NPPVSFVKFSPNGKYILTATLDNTLKLW 235
Score = 149 (57.5 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 35/126 (27%), Positives = 63/126 (50%)
Query: 5 CVQTI-DCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VND 60
C++T+ D + V+F+ +G Y LT D +KLW+ R LKTY GH +E +
Sbjct: 199 CLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGHKNEKYCLFA 258
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN- 119
+ + + SG+ D V +W + T + V+R + H V + +++ S + +N
Sbjct: 259 SFSVTGRKWVVSGSEDNMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNIIASAALEND 318
Query: 120 -TVMMW 124
T+ +W
Sbjct: 319 KTIKVW 324
>ASPGD|ASPL0000006405 [details] [associations]
symbol:AN6960 species:162425 "Emericella nidulans"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030001 "metal ion transport"
evidence=IEA] [GO:0046873 "metal ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR002110 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002523 InterPro:IPR015943
Pfam:PF00400 Pfam:PF01544 PROSITE:PS50082 PROSITE:PS50088
PROSITE:PS50294 SMART:SM00248 SMART:SM00320 GO:GO:0016020
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 EMBL:BN001301 GO:GO:0046873 EMBL:AACD01000116
RefSeq:XP_664564.1 ProteinModelPortal:Q5AXM0
EnsemblFungi:CADANIAT00007778 GeneID:2870438 KEGG:ani:AN6960.2
Uniprot:Q5AXM0
Length = 1878
Score = 270 (100.1 bits), Expect = 8.2e-22, P = 8.2e-22
Identities = 90/329 (27%), Positives = 147/329 (44%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+++V F+ D + D +K+W+ L + GH V + DS IASG++
Sbjct: 308 VKSVVFSHDSRLLASASDDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSN 367
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI- 134
D++V +WE TTG + +H V V F DS + S S V +WD ++ S +
Sbjct: 368 DRTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVL 427
Query: 135 ---QCCLDS----KDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
C++S DS++ +SD + K W S TL V + + SH +R
Sbjct: 428 EGHDDCVNSVSFSPDSRLLASASDDRTVKIWHAATGSLQRTL-EGHNDWVRSVVFSHDSR 486
Query: 187 KHIMSACGN-NVKLW-TA----EEDYGQEP--IVDACFTRDCQCILTCSTDECLRLFDKA 238
I SA + VK+W TA + + + F+ D + + + S D ++++D A
Sbjct: 487 L-IASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTA 545
Query: 239 TGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSD-GKIYKWQLVDSSQISTLIHSVGKA 297
TG L +GH D R+ S DS++ +SD G + W + T S G+
Sbjct: 546 TGSLENTLEGH---DDRVNSVSFSPDSRLLASASDDGTVKIWYAATGTVQHTFDGS-GRV 601
Query: 298 VVNSLCSHPTRKHIMSACGNN-VKLWTAE 325
++ SH T + SA + VK+W E
Sbjct: 602 AISLAFSH-TSNLLASAMDDGTVKIWDME 629
Score = 251 (93.4 bits), Expect = 8.6e-20, P = 8.6e-20
Identities = 88/329 (26%), Positives = 141/329 (42%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+ +V F+ D + D +K+W+ + L T GH V + DS +AS +
Sbjct: 265 AVGSVSFSHDSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASAS 324
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHP 133
D +V +W+ TG R + H V V F+ DS ++ SGS D TV +W+ + H
Sbjct: 325 DDGTVKIWDTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHT 384
Query: 134 IQCCLDS-------KDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+ DS DS+ +SDG K W S + ++ V NS+ P
Sbjct: 385 FEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGS-LQNVLEGHDDCV-NSVSFSPD 442
Query: 186 RKHIMSACGNN-VKLWTAEEDYGQEPIV-------DACFTRDCQCILTCSTDECLRLFDK 237
+ + SA + VK+W A Q + F+ D + I + S D ++++D
Sbjct: 443 SRLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDT 502
Query: 238 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGK 296
AT L + H D + + S DS++ +SD K W S +TL +
Sbjct: 503 ATVPLQNNLESH---DNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR 559
Query: 297 AVVNSLCSHPTRKHIMSACGNN-VKLWTA 324
VNS+ P + + SA + VK+W A
Sbjct: 560 --VNSVSFSPDSRLLASASDDGTVKIWYA 586
Score = 215 (80.7 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 77/334 (23%), Positives = 141/334 (42%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
+ +D + + R +N+ G C L++P + + GH V + +
Sbjct: 220 IDLLDVVEDSYRFALWNISGIKCAPLQVYASALLFSPAQ------FKGHDRAVGSVSFSH 273
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
DS +AS + D +V +W+ T H V V F+ DS ++ S S D TV +WD
Sbjct: 274 DSRLLASASGDGTVKIWDTATSFLQNTLEGHNEWVKSVVFSHDSRLLASASDDGTVKIWD 333
Query: 126 VKS-------RSHHP-IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+ + H+ ++ + S DS++ GS+D + W+ T +
Sbjct: 334 TATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVM 393
Query: 177 VNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQEPIV--DAC-----FTRDCQCILTCSTD 229
S +H +R+ ++ G NVK+W Q + D C F+ D + + + S D
Sbjct: 394 AVSF-AHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDSRLLASASDD 452
Query: 230 ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQIS 288
++++ ATG L +GH D+ + + S DS++ +SD K W + +
Sbjct: 453 RTVKIWHAATGSLQRTLEGHN--DW-VRSVVFSHDSRLIASASDDMTVKIWDTA-TVPLQ 508
Query: 289 TLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 322
+ S V + + SH +R ++ VK+W
Sbjct: 509 NNLESHDNWVRSVVFSHDSRLLASASDDMTVKIW 542
Score = 189 (71.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 57/205 (27%), Positives = 90/205 (43%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T + + ++ AV F D + +K+W+ L GH VN + + DS
Sbjct: 384 TFEDHEDSVMAVSFAHDSRRLASASDGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPDS 443
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+AS + D++V +W TG R H V V F+ DS ++ S S D TV +WD
Sbjct: 444 RLLASASDDRTVKIWHAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTA 503
Query: 128 S-------RSHHP-IQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVN 178
+ SH ++ + S DS++ +SD K W S +TL + VN
Sbjct: 504 TVPLQNNLESHDNWVRSVVFSHDSRLLASASDDMTVKIWDTATGSLENTLEGHDDR--VN 561
Query: 179 SLCSHPTRKHIMSACGNN-VKLWTA 202
S+ P + + SA + VK+W A
Sbjct: 562 SVSFSPDSRLLASASDDGTVKIWYA 586
Score = 144 (55.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T++ +R+V F+ D + D +K+W+ L H + V + D
Sbjct: 467 RTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDTATVPLQNNLESHDNWVRSVVFSHD 526
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
S +AS + D +V +W+ TG H +V V F+ DS ++ S S D TV +W
Sbjct: 527 SRLLASASDDMTVKIWDTATGSLENTLEGHDDRVNSVSFSPDSRLLASASDDGTVKIW 584
>UNIPROTKB|Q8N136 [details] [associations]
symbol:WDR69 "Outer row dynein assembly protein 16 homolog"
species:9606 "Homo sapiens" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AC073065 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:AK097409 EMBL:AK098821 EMBL:AK127882
EMBL:BC036377 IPI:IPI00166063 IPI:IPI00444233 RefSeq:NP_849143.1
UniGene:Hs.424594 ProteinModelPortal:Q8N136 SMR:Q8N136
PhosphoSite:Q8N136 DMDM:74759762 PRIDE:Q8N136
Ensembl:ENST00000309931 GeneID:164781 KEGG:hsa:164781
UCSC:uc002vpn.1 GeneCards:GC02P228735 HGNC:HGNC:26383 HPA:HPA046118
neXtProt:NX_Q8N136 PharmGKB:PA142670602 InParanoid:Q8N136
OMA:RKCISKL PhylomeDB:Q8N136 GenomeRNAi:164781 NextBio:88498
ArrayExpress:Q8N136 Bgee:Q8N136 CleanEx:HS_WDR69
Genevestigator:Q8N136 GermOnline:ENSG00000123977 Uniprot:Q8N136
Length = 415
Score = 257 (95.5 bits), Expect = 8.5e-22, P = 8.5e-22
Identities = 86/326 (26%), Positives = 141/326 (43%)
Query: 19 VRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIASGAS 75
V N GS C GS D+ KLW+ L T GH + V A A + +IA+G+
Sbjct: 98 VALNKSGS-CFITGSYDRTCKLWDTASGEELNTLEGHRNVVY-AIAFNNPYGDKIATGSF 155
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
DK+ LW V TG+ +R H +++ C+ FN S++V +GS D T +WD+++
Sbjct: 156 DKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTL 215
Query: 129 RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-H--SVGKAVVNSLCSH 183
R H I ++ +I GS D + W +++ LI H + A N CS
Sbjct: 216 RGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSL 275
Query: 184 PTRKHIMSACGNNVKLWTAEEDY------GQEP-IVDACFTRDCQCILTCSTDECLRLFD 236
+ C KLW A G + I+D+CF + I T S D R+F
Sbjct: 276 ILTGSMDKTC----KLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFS 331
Query: 237 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 296
AT + + + +GH+ +I + + + + GSSD W + Q ++
Sbjct: 332 AATRKCIAKLEGHEGEISKIS--FNPQGNHLLTGSSDKTARIWD-AQTGQCLQVLEGHTD 388
Query: 297 AVVNSLCSHPTRKHIMSACGNNVKLW 322
+ + ++ I + N ++W
Sbjct: 389 EIFSCAFNYKGNIVITGSKDNTCRIW 414
Score = 227 (85.0 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 76/294 (25%), Positives = 131/294 (44%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+ T++ + + A+ FN + GS DK KLW+ T+ GH E+ +
Sbjct: 127 LNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFN 186
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
S+ +A+G+ D + LW++ G+ V R H++++ + FN +I+GS D+TV++W
Sbjct: 187 PQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVW 246
Query: 125 DVKSRSHHPI---QCC-LDSKD-----SQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGK 174
D + I C + S S I GS D W + ++TL H
Sbjct: 247 DADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD--D 304
Query: 175 AVVNSLCSHPTRKHIMSACGNNV-KLWTAEEDY------GQE-PIVDACFTRDCQCILTC 226
+++S C T K I +A + ++++A G E I F +LT
Sbjct: 305 EILDS-CFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTG 363
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 280
S+D+ R++D TG+ L+ +GH F C + K + + GS D W+
Sbjct: 364 SSDKTARIWDAQTGQCLQVLEGHTDEIF--SCAFNYKGNIVITGSKDNTCRIWR 415
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 65/299 (21%), Positives = 125/299 (41%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L K H + + S +G+ D++ LW+ +G+ + H + V + FN
Sbjct: 84 LFKVLKAHILPLTNVALNKSGSCFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFN 143
Query: 107 ED-SSVVISGSQDNTVMMWDVKS-RSHHPIQ------CCL--DSKDSQIFCGSSDGKIYK 156
+ +GS D T +W V++ + +H + CL + + + + GS D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKL 203
Query: 157 WQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDYGQEPIVDA 214
W + + ++ TL HS A + SL + + I++ + V +W A+ ++
Sbjct: 204 WDIQNGEEVYTLRGHS---AEIISLSFNTSGDRIITGSFDHTVVVWDADTGRKVNILIGH 260
Query: 215 C-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQI 267
C F DC ILT S D+ +L+D G+ + GH D ++ C D I
Sbjct: 261 CAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHD--DEILDSCFDYTGKLI 318
Query: 268 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 325
S+DG + I+ L G+ ++ + +P H+++ + ++W A+
Sbjct: 319 ATASADGTARIFSAATRKCIAKLEGHEGE--ISKISFNPQGNHLLTGSSDKTARIWDAQ 375
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 55/248 (22%), Positives = 103/248 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C T I + FN + T D KLW+ + T GH+ E+ +
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFN 228
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+I +G+ D +V++W+ TG+ V H ++++ FN D S++++GS D T +W
Sbjct: 229 TSGDRIITGSFDHTVVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLW 288
Query: 125 D------VKSRSHHP---IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 175
D V + + H + C D I S+DG + I+ L G+
Sbjct: 289 DATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLEGHEGE- 347
Query: 176 VVNSLCSHPTRKHIMSACGNNV-KLWTAEEDY------GQEPIVDAC-FTRDCQCILTCS 227
++ + +P H+++ + ++W A+ G + +C F ++T S
Sbjct: 348 -ISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS 406
Query: 228 TDECLRLF 235
D R++
Sbjct: 407 KDNTCRIW 414
>RGD|1561436 [details] [associations]
symbol:LOC363267 "hypothetical protein LOC363267" species:10116
"Rattus norvegicus" [GO:0005929 "cilium" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1561436 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005929 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 HOGENOM:HOG000253909 HOVERGEN:HBG103651 OMA:RKCISKL
EMBL:BC091226 IPI:IPI00367113 RefSeq:NP_001020196.1
UniGene:Rn.104466 ProteinModelPortal:Q5BK30 PRIDE:Q5BK30
Ensembl:ENSRNOT00000021813 GeneID:363267 KEGG:rno:363267
UCSC:RGD:1561436 InParanoid:Q5BK30 NextBio:683054
Genevestigator:Q5BK30 Uniprot:Q5BK30
Length = 415
Score = 250 (93.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 81/323 (25%), Positives = 141/323 (43%)
Query: 19 VRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIASGAS 75
V N GS C GS D+ K+W+ L T GH + V A A + +IA+G+
Sbjct: 98 VALNKAGS-CFITGSYDRTCKVWDTASGEELHTLEGHRNVVY-AIAFNNPYGDKIATGSF 155
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
DK+ LW TG+ +R H +++ C+ FN S+VV +GS D T +WD++S
Sbjct: 156 DKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTL 215
Query: 129 RSH--HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
H I D+ +I GS D + W ++ TLI + + ++L S
Sbjct: 216 TGHLAEIISLSFDTSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAE-ISSALFSWDCS 274
Query: 187 KHIMSACGNNVKLWTAEEDY------GQEP-IVDACFTRDCQCILTCSTDECLRLFDKAT 239
+ + LW A G + I+D+CF + I T S D R+++ T
Sbjct: 275 LILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATT 334
Query: 240 GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 299
+ + + +GH+ +I + + +++ GSSD W V + Q ++ +
Sbjct: 335 RKCITKLEGHEGEISKIS--FNPQGNRLLTGSSDKTARIWD-VQTGQCLQVLEGHTDEIF 391
Query: 300 NSLCSHPTRKHIMSACGNNVKLW 322
+ ++ I + N+ ++W
Sbjct: 392 SCAFNYKGNIVITGSKDNSCRIW 414
Score = 227 (85.0 bits), Expect = 6.9e-17, P = 6.9e-17
Identities = 77/294 (26%), Positives = 131/294 (44%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+ T++ + + A+ FN + GS DK KLW+ T+ GH E+ +
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFN 186
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
S+ +A+G+ D + LW++ +G+ V H +++ + F+ +I+GS D+TV++W
Sbjct: 187 PQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRIITGSFDHTVVVW 246
Query: 125 DVKS-RSHHPI--QCC-----LDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGK 174
D + R H + C L S D S I GS D W ++TL H
Sbjct: 247 DASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHD--D 304
Query: 175 AVVNSLCSHPTRKHIMSACGNNV-KLWTAEEDY------GQE-PIVDACFTRDCQCILTC 226
+++S C T K I +A + +++ A G E I F +LT
Sbjct: 305 EILDS-CFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRLLTG 363
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 280
S+D+ R++D TG+ L+ +GH F C + K + + GS D W+
Sbjct: 364 SSDKTARIWDVQTGQCLQVLEGHTDEIF--SCAFNYKGNIVITGSKDNSCRIWR 415
Score = 171 (65.3 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 53/248 (21%), Positives = 100/248 (40%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C T I + FN + T D KLW+ + T GH E+ +
Sbjct: 169 CYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFD 228
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+I +G+ D +V++W+ +TG+ V H ++++ F+ D S++++GS D T M+W
Sbjct: 229 TSGDRIITGSFDHTVVVWDASTGRKVHTLIGHCAEISSALFSWDCSLILTGSMDKTCMLW 288
Query: 125 DVKS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 175
D S H + C D I S+DG + I+ L G+
Sbjct: 289 DATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGE- 347
Query: 176 VVNSLCSHPTRKHIMSACGNNV-KLWTAEEDY------GQEPIVDAC-FTRDCQCILTCS 227
++ + +P +++ + ++W + G + +C F ++T S
Sbjct: 348 -ISKISFNPQGNRLLTGSSDKTARIWDVQTGQCLQVLEGHTDEIFSCAFNYKGNIVITGS 406
Query: 228 TDECLRLF 235
D R++
Sbjct: 407 KDNSCRIW 414
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 58/297 (19%), Positives = 118/297 (39%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L K H + + S +G+ D++ +W+ +G+ + H + V + FN
Sbjct: 84 LFKVLRAHILPLTNVALNKAGSCFITGSYDRTCKVWDTASGEELHTLEGHRNVVYAIAFN 143
Query: 107 ED-SSVVISGSQDNTVMMWDVKS-RSHHPIQ------CCL--DSKDSQIFCGSSDGKIYK 156
+ +GS D T +W ++ + +H + CL + + + + GS D
Sbjct: 144 NPYGDKIATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKL 203
Query: 157 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDAC- 215
W + ++ TL + + + S + R I + + V +W A ++ C
Sbjct: 204 WDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTLIGHCA 262
Query: 216 ------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC 269
F+ DC ILT S D+ L+D +G+ + GH D ++ C D I
Sbjct: 263 EISSALFSWDCSLILTGSMDKTCMLWDATSGKCVATLTGHD--DEILDSCFDYTGKLIAT 320
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 325
S+DG + I+ L G+ ++ + +P +++ + ++W +
Sbjct: 321 ASADGTARVYNATTRKCITKLEGHEGE--ISKISFNPQGNRLLTGSSDKTARIWDVQ 375
>ZFIN|ZDB-GENE-050419-255 [details] [associations]
symbol:daw1 "dynein assembly factor with WDR repeat
domains 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0007368 "determination of
left/right symmetry" evidence=IMP] [GO:0070286 "axonemal dynein
complex assembly" evidence=IMP] [GO:0060271 "cilium morphogenesis"
evidence=IMP] [GO:0060285 "ciliary cell motility" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0005929 "cilium"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050419-255 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005929
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007368
GeneTree:ENSGT00700000104017 GO:GO:0060271 GO:GO:0070286
GO:GO:0060285 EMBL:BX908751 CTD:164781 HOGENOM:HOG000253909
HOVERGEN:HBG103651 EMBL:BC124403 EMBL:BC124455 IPI:IPI00504169
RefSeq:NP_001037817.1 UniGene:Dr.108235 ProteinModelPortal:Q1LV15
Ensembl:ENSDART00000142790 GeneID:556760 KEGG:dre:556760
InParanoid:Q05AM0 NextBio:20881649 ArrayExpress:Q1LV15 Bgee:Q1LV15
Uniprot:Q1LV15
Length = 415
Score = 250 (93.1 bits), Expect = 1.1e-20, P = 1.1e-20
Identities = 81/283 (28%), Positives = 128/283 (45%)
Query: 19 VRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD--SSQIASGAS 75
V FN GS C GS D+ K+W+ L T GH + V A A + ++A+G+
Sbjct: 98 VAFNKSGS-CFITGSYDRTCKIWDTASGEELHTLEGHRNVVY-AIAFNNPYGDKVATGSF 155
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
DK+ LW TG+ +R H +++ C+ FN S++V +GS D T +WDV+S
Sbjct: 156 DKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTL 215
Query: 129 RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK-AVV--NSLCSH 183
H I C ++ ++ GS D W + ++ L G+ + V N CS
Sbjct: 216 AGHFAEIISLCFNTTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSL 275
Query: 184 PTRKHIMSACGNNVKLWTAEEDY------GQ-EPIVDACFTRDCQCILTCSTDECLRLFD 236
+ +C K+W AE G + ++D CF Q I T S D R+F
Sbjct: 276 IATASLDKSC----KVWDAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFS 331
Query: 237 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 279
T + L + +GHK G+ + C +++ S++ S D W
Sbjct: 332 TDTFQCLCQLEGHK-GEIS-KVCFNAQGSRVLTASVDKTSRVW 372
Score = 211 (79.3 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 71/292 (24%), Positives = 123/292 (42%)
Query: 6 VQTIDCKQGAIRAVRFNVD-GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+ T++ + + A+ FN G T DK KLW+ T+ GH E+
Sbjct: 127 LHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFN 186
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
S+ +A+G+ D + LW+V +G+ V H +++ + FN +++GS D+T ++W
Sbjct: 187 PQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAILW 246
Query: 125 DVKS-RSHH-------PIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKA 175
DV S R H I C + D + +S K K W ++TL+ +
Sbjct: 247 DVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHNDEV 306
Query: 176 VVNSLCSHPTRKHIMSACGNNVKLWTAEEDY-------GQE-PIVDACFTRDCQCILTCS 227
+ +C + T + I +A + + + + G + I CF +LT S
Sbjct: 307 L--DVCFNYTGQLIATASADGTSRVFSTDTFQCLCQLEGHKGEISKVCFNAQGSRVLTAS 364
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 279
D+ R++ TG L+ +GH F C + + I GS D W
Sbjct: 365 VDKTSRVWCVKTGACLQVLEGHSDEIF--SCAFNYEGDTIITGSKDNTCRIW 414
Score = 163 (62.4 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 54/249 (21%), Positives = 100/249 (40%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C T I + FN + T D KLW+ + T GH E+
Sbjct: 169 CFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEIISLCFN 228
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ +G+ D + ILW+V +G+ V H +++CV+FN D S++ + S D + +W
Sbjct: 229 TTGDRLVTGSFDHTAILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVW 288
Query: 125 DVKSRS-------HHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 175
D + H+ + C + I S+DG + D+ Q + K
Sbjct: 289 DAEGGQCLATLLGHNDEVLDVCFNYTGQLIATASADGTSRVFS-TDTFQCLCQLEG-HKG 346
Query: 176 VVNSLCSHPTRKHIMSACGNNV-KLWTAE--------EDYGQEPIVDACFTRDCQCILTC 226
++ +C + +++A + ++W + E + E I F + I+T
Sbjct: 347 EISKVCFNAQGSRVLTASVDKTSRVWCVKTGACLQVLEGHSDE-IFSCAFNYEGDTIITG 405
Query: 227 STDECLRLF 235
S D R++
Sbjct: 406 SKDNTCRIW 414
Score = 159 (61.0 bits), Expect = 7.8e-09, P = 7.8e-09
Identities = 62/313 (19%), Positives = 123/313 (39%)
Query: 29 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 88
L C +K+ + + L + H + + S +G+ D++ +W+ +G+
Sbjct: 66 LICKLQEKVGQKDERKFYLFRALQAHILPLTNVAFNKSGSCFITGSYDRTCKIWDTASGE 125
Query: 89 PVRRWREHASKVTCVKFNED-SSVVISGSQDNTVMMWDVKS-------RSHHPIQCCL-- 138
+ H + V + FN V +GS D T +W ++ R H CL
Sbjct: 126 ELHTLEGHRNVVYAIAFNNPYGDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAF 185
Query: 139 DSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 198
+ + + + GS D W + ++STL + + SLC + T +++ ++
Sbjct: 186 NPQSTLVATGSMDTTAKLWDVESGEEVSTLAGHFAEII--SLCFNTTGDRLVTGSFDHTA 243
Query: 199 -LWTAEEDYGQEPIVD-----AC--FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK 250
LW + +C F DC I T S D+ +++D G+ L GH
Sbjct: 244 ILWDVPSGRKVHVLSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHN 303
Query: 251 SGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKH 310
D ++ C + I S+DG + D+ Q + K ++ +C +
Sbjct: 304 --DEVLDVCFNYTGQLIATASADGTSRVFS-TDTFQCLCQLEG-HKGEISKVCFNAQGSR 359
Query: 311 IMSACGNNV-KLW 322
+++A + ++W
Sbjct: 360 VLTASVDKTSRVW 372
>DICTYBASE|DDB_G0287273 [details] [associations]
symbol:wdr5 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0051568 "histone H3-K4
methylation" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0035097 "histone methyltransferase complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0287273
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000154_GR GO:GO:0042393 GO:GO:0051568 GO:GO:0035097
EMBL:AAFI02000099 HSSP:P61964 KO:K14963 OMA:KLWKSDT
RefSeq:XP_637302.1 ProteinModelPortal:Q54KL5 SMR:Q54KL5
EnsemblProtists:DDB0232948 GeneID:8626039 KEGG:ddi:DDB_G0287273
ProtClustDB:CLSZ2430012 Uniprot:Q54KL5
Length = 335
Score = 244 (91.0 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 58/197 (29%), Positives = 100/197 (50%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
+I +V+F+ DG + + +DK IK+W Y +T GH ++D + DS I S +
Sbjct: 48 SISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLICSAS 107
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KS 128
DK++ +W+V +G+ V+ + H V V FN S++++SGS D V +WDV K
Sbjct: 108 DDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKM 167
Query: 129 RSHH--PIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
S H P+ ++D + GS DG + W ++T+ GK V + + P
Sbjct: 168 ISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEV-SFVKFSPN 226
Query: 186 RKHIMSAC-GNNVKLWT 201
K +++ N ++LW+
Sbjct: 227 GKFVLAGTLDNTLRLWS 243
Score = 201 (75.8 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T++ + I + ++ D + DK IK+W+ ++KT GH V +
Sbjct: 82 RTLEGHKEGISDIAWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQ 141
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+ I SG+ D++V +W+V TG+ + H+ VT V FN D ++V+SGS D TV +WD
Sbjct: 142 SNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDT 201
Query: 127 KSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
+ D K+ S +GK +D++ + ++ K + + H
Sbjct: 202 TTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNT-LRLWSYNNNKKCLKTYTGHKNE 260
Query: 187 KH-IMSACGNNVKLW--TAEED 205
K+ I S W T ED
Sbjct: 261 KYCIFSTFSVTCGKWIVTGSED 282
Score = 170 (64.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 54/212 (25%), Positives = 93/212 (43%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
V+T+ + + V FN + ++ D+ +++W+ K H+ V
Sbjct: 123 VKTLKGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTGECTKMISAHSDPVTGVHFNR 182
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWR-EHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D + + SG+ D +V +W+ TTGQ + E +V+ VKF+ + V++G+ DNT+ +W
Sbjct: 183 DGTLVVSGSYDGTVRIWDTTTGQLLNTISTEDGKEVSFVKFSPNGKFVLAGTLDNTLRLW 242
Query: 125 DVKSRS--------HHPIQCCLDSKDSQ-----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
+ H + C+ S S I GS D IY + L + TL
Sbjct: 243 SYNNNKKCLKTYTGHKNEKYCIFSTFSVTCGKWIVTGSEDNLIYIYNLQTREIVQTLAGH 302
Query: 172 VGKAVVNSLCSHPTRKHIMSAC---GNNVKLW 200
+ VV ++ HPT I S +VK+W
Sbjct: 303 --EDVVLTVACHPTENIIASGALEKDRSVKIW 332
Score = 138 (53.6 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 48/165 (29%), Positives = 75/165 (45%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMW---DVK-SRS---HHP-IQCCLDSKDSQIFC 147
H ++ VKF+ D + S S D T+ +W D K R+ H I S+DS++ C
Sbjct: 45 HLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDIAWSQDSKLIC 104
Query: 148 GSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW---TA 202
+SD K K W + + TL K V + +P I+S NV++W T
Sbjct: 105 SASDDKTIKIWDVESGKMVKTL--KGHKEYVFGVSFNPQSNLIVSGSFDENVRIWDVNTG 162
Query: 203 E----EDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL 243
E +P+ F RD +++ S D +R++D TG+LL
Sbjct: 163 ECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIWDTTTGQLL 207
Score = 134 (52.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 36/166 (21%), Positives = 75/166 (45%)
Query: 45 NLLLK-TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
N +LK T GH ++ + D +AS ++DK++ +W G+ R H ++ +
Sbjct: 35 NYILKYTLKGHLKSISSVKFSPDGKWLASASADKTIKIWGAYDGKFERTLEGHKEGISDI 94
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS-------RSH--HPIQCCLDSKDSQIFCGSSDGKI 154
+++DS ++ S S D T+ +WDV+S + H + + + + I GS D +
Sbjct: 95 AWSQDSKLICSASDDKTIKIWDVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSFDENV 154
Query: 155 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 200
W V++ + + +I + V + + + V++W
Sbjct: 155 RIWD-VNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGTVRIW 199
>WB|WBGene00006474 [details] [associations]
symbol:wdr-5.1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0040027 "negative
regulation of vulval development" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0006915
GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 247 (92.0 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 63/208 (30%), Positives = 105/208 (50%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y + T++ +I + +F+ G Y T +DK +K+WN + +T GH VND
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ DS + S + DK++ ++E+ T + + + H + V C FN SS+V+SGS D +V
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 123 MWDVKSR-------SHH-PIQCCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 173
+WDVK+ +H P+ ++D S I GS DG + W + I TL+
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 174 KAVVNSLCSHPTRKHIMSA-CGNNVKLW 200
V S P K+I+++ + +KLW
Sbjct: 257 PPVAFVKFS-PNGKYILASNLDSTLKLW 283
Score = 196 (74.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 75/302 (24%), Positives = 136/302 (45%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L+ T GH ++ A + + + ++DK+V +W + R H V + ++
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 107 EDSSVVISGSQDNTVMMWD-VKSR------SHHP-IQCC-LDSKDSQIFCGSSDGKIYKW 157
DS V+S S D T+ +++ V SR H+ + CC + + S + GS D + W
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 158 QLVDSSQISTL-IHSVGKAVVN-----SLCSHPTRKHIM----SACGNNVKLWTAEEDYG 207
+ I TL HS + V+ SL + + ++ +A G +K +E+
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN-- 256
Query: 208 QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ- 266
P+ F+ + + IL + D L+L+D + G+ L++Y GH++ + I +
Sbjct: 257 -PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKW 315
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC---GNNVKLWT 323
I GS D KIY W L + +I + + V+ S C HP + I S N + +W
Sbjct: 316 IISGSEDCKIYIWNL-QTREIVQCLEGHTQPVLASDC-HPVQNIIASGALEPDNKIHIWR 373
Query: 324 AE 325
++
Sbjct: 374 SD 375
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/126 (24%), Positives = 58/126 (46%)
Query: 5 CVQT-IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VND 60
C++T +D + + V+F+ +G Y L D +KLW+ + LK Y GH + +
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS--QD 118
+ I SG+ D + +W + T + V+ H V + +++ SG+ D
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPD 366
Query: 119 NTVMMW 124
N + +W
Sbjct: 367 NKIHIW 372
>UNIPROTKB|Q17963 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6239 "Caenorhabditis elegans" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0008340
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040027 GO:GO:0051568
EMBL:Z37139 GeneTree:ENSGT00690000101787 KO:K14963
HOGENOM:HOG000091642 OMA:KLWKSDT PIR:T19266 RefSeq:NP_497749.1
ProteinModelPortal:Q17963 SMR:Q17963 IntAct:Q17963 STRING:Q17963
PaxDb:Q17963 EnsemblMetazoa:C14B1.4 GeneID:175474
KEGG:cel:CELE_C14B1.4 CTD:175474 WormBase:C14B1.4 InParanoid:Q17963
NextBio:888320 Uniprot:Q17963
Length = 376
Score = 247 (92.0 bits), Expect = 3.6e-20, P = 3.6e-20
Identities = 63/208 (30%), Positives = 105/208 (50%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y + T++ +I + +F+ G Y T +DK +K+WN + +T GH VND
Sbjct: 77 YKLMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIA 136
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ DS + S + DK++ ++E+ T + + + H + V C FN SS+V+SGS D +V
Sbjct: 137 WSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVR 196
Query: 123 MWDVKSR-------SHH-PIQCCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 173
+WDVK+ +H P+ ++D S I GS DG + W + I TL+
Sbjct: 197 IWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN 256
Query: 174 KAVVNSLCSHPTRKHIMSA-CGNNVKLW 200
V S P K+I+++ + +KLW
Sbjct: 257 PPVAFVKFS-PNGKYILASNLDSTLKLW 283
Score = 196 (74.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 75/302 (24%), Positives = 136/302 (45%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L+ T GH ++ A + + + ++DK+V +W + R H V + ++
Sbjct: 79 LMCTLEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWS 138
Query: 107 EDSSVVISGSQDNTVMMWD-VKSR------SHHP-IQCC-LDSKDSQIFCGSSDGKIYKW 157
DS V+S S D T+ +++ V SR H+ + CC + + S + GS D + W
Sbjct: 139 SDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIW 198
Query: 158 QLVDSSQISTL-IHSVGKAVVN-----SLCSHPTRKHIM----SACGNNVKLWTAEEDYG 207
+ I TL HS + V+ SL + + ++ +A G +K +E+
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN-- 256
Query: 208 QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ- 266
P+ F+ + + IL + D L+L+D + G+ L++Y GH++ + I +
Sbjct: 257 -PPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKW 315
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC---GNNVKLWT 323
I GS D KIY W L + +I + + V+ S C HP + I S N + +W
Sbjct: 316 IISGSEDCKIYIWNL-QTREIVQCLEGHTQPVLASDC-HPVQNIIASGALEPDNKIHIWR 373
Query: 324 AE 325
++
Sbjct: 374 SD 375
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/126 (24%), Positives = 58/126 (46%)
Query: 5 CVQT-IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VND 60
C++T +D + + V+F+ +G Y L D +KLW+ + LK Y GH + +
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFA 306
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS--QD 118
+ I SG+ D + +W + T + V+ H V + +++ SG+ D
Sbjct: 307 NFSVTGGKWIISGSEDCKIYIWNLQTREIVQCLEGHTQPVLASDCHPVQNIIASGALEPD 366
Query: 119 NTVMMW 124
N + +W
Sbjct: 367 NKIHIW 372
>UNIPROTKB|G3V221 [details] [associations]
symbol:WDR83 "Mitogen-activated protein kinase organizer 1,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0016301 "kinase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0016301
EMBL:CH471106 UniGene:Hs.657204 HGNC:HGNC:32672 ChiTaRS:WDR83
EMBL:AC010422 SMR:G3V221 Ensembl:ENST00000548381
Ensembl:ENST00000553179 Uniprot:G3V221
Length = 71
Score = 223 (83.6 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 37/53 (69%), Positives = 46/53 (86%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV 58
++T+DC QGA+RAVRFNVDG+YCLTCGSDK +KLWNP R LL+TY GH +E+
Sbjct: 18 LKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEL 70
>ASPGD|ASPL0000046644 [details] [associations]
symbol:AN2021 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001307 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000032 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR007111 PROSITE:PS50837 RefSeq:XP_659625.1
ProteinModelPortal:Q5BBQ9 EnsemblFungi:CADANIAT00008689
GeneID:2875333 KEGG:ani:AN2021.2 OMA:KQVLKGH OrthoDB:EOG412QDH
Uniprot:Q5BBQ9
Length = 1311
Score = 244 (91.0 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 90/327 (27%), Positives = 143/327 (43%)
Query: 10 DCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ 69
DCKQ I A ++ D TC I L++ L K GH+HE + + DS Q
Sbjct: 740 DCKQ--IAAFGWSRDS----TC-----IMLFDTATGDLQKILKGHSHECSTMAFSSDSRQ 788
Query: 70 IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD---- 125
+ +G+ D +V LW TTG + + H V V + D ++SGS + V +WD
Sbjct: 789 LVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQIVSGSIE-AVKLWDAATG 847
Query: 126 --VKSRSHHPIQCCLDSKDS-QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+K+ + S DS QI G DGKI+ W + Q TL G A+++ S
Sbjct: 848 DLLKTLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGTLQ-KTLERHPG-AIMSIAFS 905
Query: 183 HPTRKHIMSACGNNVKLWT-----AEEDYGQEP-IVDACFTRDCQCILTCSTDECLRLFD 236
++ + + + +K W +E G + + D + I + S D+ ++L+D
Sbjct: 906 PDVKQLVTCSTDSTIKRWDITIGGVQEAVGHSKHVTTMVLSPDGKVIASGSADKTIKLWD 965
Query: 237 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 296
ATG+L + GH ++ LD++ + C S KI W + ++ S
Sbjct: 966 AATGDLQKTLTGHLDTVEKVVFSLDNRQI-VSCSSEAVKI--WDAA-TGKVQNSFES--D 1019
Query: 297 AVVNSLCSHPTRKHIMSA-CGNNVKLW 322
V + P KHI S C +KLW
Sbjct: 1020 DVFTIVAVSPDGKHIASGHCNGRIKLW 1046
Score = 202 (76.2 bits), Expect = 6.0e-13, P = 6.0e-13
Identities = 80/314 (25%), Positives = 135/314 (42%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
T +T++ GAI ++ F+ D +TC +D IK W+ + + G H+ V
Sbjct: 887 TLQKTLERHPGAIMSIAFSPDVKQLVTCSTDSTIKRWDITIGGVQEAVG-HSKHVTTMVL 945
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ D IASG++DK++ LW+ TG + H V V F+ D+ ++S S + V +
Sbjct: 946 SPDGKVIASGSADKTIKLWDAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCSSE-AVKI 1004
Query: 124 WDVKSRSHHPIQCCLDSKDS-QIFCGSSDGK-IYKWQLVDSSQISTLIHSVGKAVVNSLC 181
WD + +Q +S D I S DGK I + +I + G +++ ++
Sbjct: 1005 WDAATGK---VQNSFESDDVFTIVAVSPDGKHIASGHC--NGRIKLWDMATG-SLLKTMA 1058
Query: 182 SHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 241
+ R S V +E I F+ D + IL+ STD ++L+D ATG+
Sbjct: 1059 GY--RSKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTSTDRAIKLWDAATGD 1116
Query: 242 LLEEYKGHK-----------SG--DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIS 288
L + H SG ++ S I S+D I W + S + S
Sbjct: 1117 LQKRLPCHSDSIITDAFSRSSGYPNWIFSVAFSSDGQHIAAASADKTIRVWSIEKSLKAS 1176
Query: 289 TLI-HSVGKAVVNS 301
+ +VG + +S
Sbjct: 1177 KYLGRAVGSHIKSS 1190
Score = 133 (51.9 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/104 (31%), Positives = 50/104 (48%)
Query: 40 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ---------PV 90
W P +++T GH+ V + D QIASG+ + LW+ TTG P
Sbjct: 609 WTP----MIQTLTGHSEAVWRVAFSPDGKQIASGSDSGLIKLWDTTTGSLQKTLSGSHPK 664
Query: 91 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 134
RR++ +V + F DS ++ISG D +VM+WD + I
Sbjct: 665 RRYQIQQEQVKAMAFLPDSKLIISGYYDGSVMLWDTTTGDRQEI 708
>FB|FBgn0020618 [details] [associations]
symbol:Rack1 "Receptor of activated protein kinase C 1"
species:7227 "Drosophila melanogaster" [GO:0005080 "protein kinase
C binding" evidence=NAS] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0035220 "wing disc development" evidence=IMP] [GO:0042335
"cuticle development" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007626 "locomotory behavior" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0046716 "muscle cell homeostasis"
evidence=IGI] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0016243 "regulation of autophagic vacuole size"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0018991 GO:GO:0005875
EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048477 GO:GO:0007626 GO:GO:0042335 GO:GO:0035220
GO:GO:0046716 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 EMBL:U96491 EMBL:AY071661
RefSeq:NP_477269.1 UniGene:Dm.6830 ProteinModelPortal:O18640
SMR:O18640 DIP:DIP-17169N IntAct:O18640 MINT:MINT-795417
STRING:O18640 PaxDb:O18640 PRIDE:O18640 EnsemblMetazoa:FBtr0079565
EnsemblMetazoa:FBtr0331238 GeneID:34070 KEGG:dme:Dmel_CG7111
CTD:34070 FlyBase:FBgn0020618 InParanoid:O18640 OrthoDB:EOG4X3FGX
PhylomeDB:O18640 ChiTaRS:GNB2L1 GenomeRNAi:34070 NextBio:786727
Bgee:O18640 GermOnline:CG7111 Uniprot:O18640
Length = 318
Score = 219 (82.2 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 66/234 (28%), Positives = 108/234 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
I V + DG+Y L+ D+ ++LW+ + + GH +V + D+ QI SG+
Sbjct: 67 ISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSR 126
Query: 76 DKSVILWEVTTGQPVRRWRE--HASKVTCVKF--NEDSSVVISGSQDNTVMMWDVKS--- 128
DK++ LW T + +E H V+CV+F N + +++S D TV +W++ +
Sbjct: 127 DKTIKLWN-TLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKL 185
Query: 129 -RSHHPIQCCLD----SKDSQIFC--GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
+HH L+ S D + C G D K W L D + TL H+ ++N+LC
Sbjct: 186 KNNHHGHNGYLNTVTVSPDGSL-CTSGGKDSKALLWDLNDGKNLYTLEHN---DIINALC 241
Query: 182 SHPTRKHIMSACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
P R + A G ++K+W E+ E + QC+ L STD
Sbjct: 242 FSPNRYWLCVAYGPSIKIWDLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTD 295
Score = 154 (59.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
GH+H ++D + D + SG+ D+++ LW++ G+ RR+ H V V F+ D+ +
Sbjct: 62 GHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQI 121
Query: 113 ISGSQDNTVMMWDVKSRSHHPIQ 135
+SGS+D T+ +W+ + IQ
Sbjct: 122 VSGSRDKTIKLWNTLAECKFTIQ 144
Score = 129 (50.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 48/205 (23%), Positives = 84/205 (40%)
Query: 130 SHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
SH L S + GS D + W L + + + K V++ S R+ +
Sbjct: 64 SHFISDVVLSSDGNYALSGSWDQTLRLWDLA-AGKTTRRFEGHTKDVLSVAFSADNRQIV 122
Query: 190 MSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLFDKAT 239
+ +KLW T +ED + + F+ + I++C D +++++ A
Sbjct: 123 SGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCVRFSPNHSNPIIVSCGWDRTVKVWNLAN 182
Query: 240 GELLEEYKGHKSGDFRIECCLDSKDSQIFC--GSSDGKIYKWQLVDSSQISTLIHSVGKA 297
+L + GH + S D + C G D K W L D + TL H+
Sbjct: 183 CKLKNNHHGHNG---YLNTVTVSPDGSL-CTSGGKDSKALLWDLNDGKNLYTLEHN---D 235
Query: 298 VVNSLCSHPTRKHIMSACGNNVKLW 322
++N+LC P R + A G ++K+W
Sbjct: 236 IINALCFSPNRYWLCVAYGPSIKIW 260
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 42/165 (25%), Positives = 72/165 (43%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
+ VRF+ + S ++CG D+ +K+WN L + GH +N T + D S SG
Sbjct: 152 VSCVRFSPNHSNPIIVSCGWDRTVKVWNLANCKLKNNHHGHNGYLNTVTVSPDGSLCTSG 211
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------ 127
D +LW++ G+ + EH + + F+ + + + ++ +WD+
Sbjct: 212 GKDSKALLWDLNDGKNLYTL-EHNDIINALCFSPNR-YWLCVAYGPSIKIWDLACKKTVE 269
Query: 128 ----------SRSHHPIQCC--LDSKDSQ-IFCGSSDGKIYKWQL 159
S++ P QC S D Q +F G SD I WQ+
Sbjct: 270 ELRPEVVSPTSKADQP-QCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
Score = 107 (42.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 34/121 (28%), Positives = 54/121 (44%)
Query: 53 GHAHEVND-ATAACDSSQIASGASDKSVILWEVTT------GQPVRRWREHASKVTCVKF 105
GH V AT D I S + DK++I+W++T G P +R H+ ++ V
Sbjct: 13 GHNGWVTQIATNPKDPDTIISASRDKTLIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVL 72
Query: 106 NEDSSVVISGSQDNTVMMWDVKS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYK 156
+ D + +SGS D T+ +WD+ + H + + + QI GS D I
Sbjct: 73 SSDGNYALSGSWDQTLRLWDLAAGKTTRRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKL 132
Query: 157 W 157
W
Sbjct: 133 W 133
Score = 49 (22.3 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 29/113 (25%), Positives = 53/113 (46%)
Query: 179 SLCSHPTR--KHIMSACGNNVKLWTAEEDYGQEPIVDA-CFTRDCQCILTCSTDECLRLF 235
SLC+ + K ++ + L+T E + I++A CF+ + + L + ++++
Sbjct: 206 SLCTSGGKDSKALLWDLNDGKNLYTLEHN----DIINALCFSPN-RYWLCVAYGPSIKIW 260
Query: 236 DKATGELLEEYKGHK-SGDFRIEC--CLD---SKDSQ-IFCGSSDGKIYKWQL 281
D A + +EE + S + + CL S D Q +F G SD I WQ+
Sbjct: 261 DLACKKTVEELRPEVVSPTSKADQPQCLSLAWSTDGQTLFAGYSDNTIRVWQV 313
>ZFIN|ZDB-GENE-050116-3 [details] [associations]
symbol:cdc40 "cell division cycle 40 homolog (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-050116-3 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K12816 CTD:51362
HOVERGEN:HBG053695 EMBL:BC088381 IPI:IPI00489031
RefSeq:NP_001009990.1 UniGene:Dr.30056 ProteinModelPortal:Q5I0F8
STRING:Q5I0F8 GeneID:494534 KEGG:dre:494534 NextBio:20865726
Uniprot:Q5I0F8
Length = 578
Score = 178 (67.7 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ A+R F G L+C D KIKLW Y ++T+ GH+ V D +Q S
Sbjct: 290 VSAIRLFPKSGHLLLSCSMDCKIKLWEVYNERRCVRTFIGHSKAVRDVCFNNSGTQFLSA 349
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKS 128
A D+ + LW+ TGQ + R+ KV CVKFN D +++++G D ++ WD++S
Sbjct: 350 AYDRYIKLWDSETGQCISRFTNR--KVPYCVKFNPDEDKQNLLVAGMSDKKIVQWDIRS 406
Score = 139 (54.0 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 31/126 (24%), Positives = 60/126 (47%)
Query: 2 EYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVN 59
E CV+T A+R V FN G+ L+ D+ IKLW+ + + + V
Sbjct: 320 ERRCVRTFIGHSKAVRDVCFNNSGTQFLSAAYDRYIKLWDSETGQCISRFTNRKVPYCVK 379
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
+ + +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D
Sbjct: 380 FNPDEDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDENRRFVSTSDDK 439
Query: 120 TVMMWD 125
++ +W+
Sbjct: 440 SLRVWE 445
Score = 95 (38.5 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 43/199 (21%), Positives = 85/199 (42%)
Query: 139 DSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS-HPTRKHIMSACGNNV 197
+ K + + G SD KI +W + + +G VN++ R+ + ++ ++
Sbjct: 384 EDKQNLLVAGMSDKKIVQWDIRSGEVVQEYDRHLG--AVNTITFVDENRRFVSTSDDKSL 441
Query: 198 KLWT----AEEDYGQEPIVDAC----FTRDCQCILTCSTDECLRLFDKATGELLEE---Y 246
++W A+ Y EP + + + + + + S D + +F L + +
Sbjct: 442 RVWEWDIPADFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIF 501
Query: 247 KGHKSGDFRIECCLD-SKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 304
KGH + C +D S D S + G +DGK+ W ++++ I + K +++L
Sbjct: 502 KGHMVAGYA--CQVDFSPDMSYVVSGDADGKLNIWDW-KTTKLYHRIKAHDKVCISALWH 558
Query: 305 -HPTRKHIMSACGNNVKLW 322
H T K I +KLW
Sbjct: 559 PHETSKVITCGWDGQIKLW 577
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 221 (82.9 bits), Expect = 4.6e-16, P = 4.6e-16
Identities = 81/297 (27%), Positives = 139/297 (46%)
Query: 40 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK 99
W P L+T GH+ + T + D +ASG++D ++ LW+ +G + H+S
Sbjct: 30 WGPE----LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSS 85
Query: 100 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPIQCCLDSKDSQIFCGSSDGKIYKWQ 158
V V F+ + ++ SGS D T+ +W+ S S H ++ D +S F S +G++ W
Sbjct: 86 VQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAF--SPNGQL--W- 140
Query: 159 LVDSSQISTLIHSV-GKAV-VNSLCSHPTRKHIMSACGNN-VKLWTA-----EEDYGQEP 210
+ I +L H++ G + V S+ P + + S +KLW + + G
Sbjct: 141 ---NPAIGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHS 197
Query: 211 --IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
++ F+ D + + + S D ++L+D +G L +GH + +IE S + Q+
Sbjct: 198 NWVLPLVFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSN---KIESLAFSPNGQLL 254
Query: 269 C-GSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
GSSD I W S TL HS +V S+ P + + S G+N +KLW
Sbjct: 255 ASGSSDATIKLWDTATGSFRHTLKGHS---DMVLSVVFSPDSQLLESGSGDNTIKLW 308
Score = 192 (72.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 75/288 (26%), Positives = 123/288 (42%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
+QT++ I V F+ DG + +D IKLW+P L +T GH+ V +
Sbjct: 34 LQTLEGHSDWIETVTFSPDGRLLASGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSP 93
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV--VISGSQDNTVMM 123
+ +ASG+SD ++ LW + H+ +V V F+ + + GS +T+
Sbjct: 94 NGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTI-- 151
Query: 124 WDVKSRSHHPIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVG--KAVVNSL 180
+ S + S D Q+ GS++ I W DS+ L H++G V L
Sbjct: 152 ---EGHSDWVLSVAF-SPDGQLLASGSAEKTIKLW---DSATCG-LKHTLGGHSNWVLPL 203
Query: 181 CSHPTRKHIMSACGN-NVKLWTAEEDY------GQEPIVDA-CFTRDCQCILTCSTDECL 232
P + + S + +KLW G +++ F+ + Q + + S+D +
Sbjct: 204 VFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATI 263
Query: 233 RLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF-CGSSDGKIYKW 279
+L+D ATG KGH D + S DSQ+ GS D I W
Sbjct: 264 KLWDTATGSFRHTLKGHS--DMVLSVVF-SPDSQLLESGSGDNTIKLW 308
Score = 181 (68.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 36/105 (34%), Positives = 58/105 (55%)
Query: 21 FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 80
F+ DG + +D IKLW+P L T GH++++ + + +ASG+SD ++
Sbjct: 205 FSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATIK 264
Query: 81 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
LW+ TG + H+ V V F+ DS ++ SGS DNT+ +WD
Sbjct: 265 LWDTATGSFRHTLKGHSDMVLSVVFSPDSQLLESGSGDNTIKLWD 309
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 215 (80.7 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 58/200 (29%), Positives = 100/200 (50%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y ++T++ AI V+F+ DG+ + DK + LW+ L+ Y GH+ ++D
Sbjct: 33 YRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLA 92
Query: 63 AACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
+ DS S + D ++ +W+ + + ++ R H + V CV FN S++++SGS D T+
Sbjct: 93 WSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETI 152
Query: 122 MMWDVKS-------RSHH-PIQCCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+W+VK+ ++H PI ++D S I S DG W + + + TLI
Sbjct: 153 RIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDK 212
Query: 173 GKAVVNSLCSHPTRKHIMSA 192
AV + S P K I+ A
Sbjct: 213 SPAVSFAKFS-PNGKFILVA 231
Score = 179 (68.1 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 47/177 (26%), Positives = 86/177 (48%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVN 59
Y+ + + I + ++ D Y + D +++W+ PY LK GH + V
Sbjct: 75 YSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYE--CLKVLRGHTNFVF 132
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
S+ I SG+ D+++ +WEV TG+ VR + H+ ++ V FN D S+++S S D
Sbjct: 133 CVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDG 192
Query: 120 TVMMWDVKSRSHHPIQCCLDSKDSQI-FCG-SSDGKIYKWQLVDSSQISTLIHSVGK 174
+ +WD K + ++ +D K + F S +GK +DS+ + ++ GK
Sbjct: 193 SCKIWDAKEGTC--LKTLIDDKSPAVSFAKFSPNGKFILVATLDST-LKLSNYATGK 246
Score = 171 (65.3 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 50/194 (25%), Positives = 94/194 (48%)
Query: 32 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVR 91
G+ + ++ PYR+L KT GH ++ + D + +AS + DK++ILW T +
Sbjct: 22 GTSGNVPIYKPYRHL--KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIH 79
Query: 92 RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--------RSHHPIQCCLDSK-- 141
R+ H+S ++ + ++ DS S S D T+ +WD +S R H C++
Sbjct: 80 RYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPP 139
Query: 142 DSQIFCGSSDGKIYKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGN-NVKL 199
+ I GS D I W++ + + HS+ ++S+ + I+SA + + K+
Sbjct: 140 SNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMP---ISSVHFNRDGSLIVSASHDGSCKI 196
Query: 200 WTAEEDYGQEPIVD 213
W A+E + ++D
Sbjct: 197 WDAKEGTCLKTLID 210
Score = 146 (56.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTY-GGHAHEVNDATA 63
CV+ I I +V FN DGS ++ D K+W+ LKT + V+ A
Sbjct: 162 CVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKF 221
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK--FN-EDSSVVISGSQDNT 120
+ + I D ++ L TG+ ++ + H +KV C+ F+ + ++SGS+DN
Sbjct: 222 SPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNC 281
Query: 121 VMMWDVKSRS 130
V +WD+++R+
Sbjct: 282 VYLWDLQARN 291
Score = 145 (56.1 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 2 EYTCVQT-IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND 60
E TC++T ID K A+ +F+ +G + L D +KL N LK Y GH ++V
Sbjct: 201 EGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFC 260
Query: 61 ATAA---CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGS 116
T+A + I SG+ D V LW++ ++R H V V + + + SG+
Sbjct: 261 ITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGN 320
Query: 117 Q-DNTVMMW 124
D T+ +W
Sbjct: 321 HLDKTIRIW 329
>CGD|CAL0000165 [details] [associations]
symbol:orf19.536 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0032947
"protein complex scaffold" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0016573 "histone acetylation" evidence=IEA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 CGD:CAL0000165
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03130 HOGENOM:HOG000212424
RefSeq:XP_717399.1 RefSeq:XP_717491.1 ProteinModelPortal:Q5A6L8
STRING:Q5A6L8 GeneID:3640929 GeneID:3640987 KEGG:cal:CaO19.536
KEGG:cal:CaO19.8169 Uniprot:Q5A6L8
Length = 798
Score = 223 (83.6 bits), Expect = 9.7e-16, P = 9.7e-16
Identities = 58/210 (27%), Positives = 98/210 (46%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + V F+ D Y L+C DK ++LW+ L +Y GH V D + +
Sbjct: 518 GPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGHYFVTA 577
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+ D++ LW P+R + H + V CV+F+ +S+ V +GS D T MWDV + +
Sbjct: 578 SHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHTGNCVR 637
Query: 131 ----H-HPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
H + + C S D + + G DG I W + ++ ++ +A + SL
Sbjct: 638 VFLGHTNSVNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSM-RGHARASLYSLAFSR 696
Query: 185 TRKHIMSACGNN-VKLWTAEE---DYGQEP 210
++S C +N V++W ++ D G EP
Sbjct: 697 DGTVLVSGCADNSVRVWDVKKNTNDAGPEP 726
Score = 119 (46.9 bits), Expect = 0.00062, P = 0.00062
Identities = 52/264 (19%), Positives = 100/264 (37%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWN----PYRNLLLKTYG-------- 52
C+ T + + FN D + D IKLW+ P +++L +
Sbjct: 453 CMYTFHNTNNNMTCIEFNDDSTLVAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRK 512
Query: 53 --GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS 110
GH+ V + + D+ + S + DK+V LW + T + ++ H V VKF+
Sbjct: 513 LIGHSGPVYGVSFSPDNKYLLSCSEDKTVRLWSLDTYTALVSYKGHTQPVWDVKFSPLGH 572
Query: 111 VVISGSQDNTVMMWDVKS-------RSH-HPIQCC-LDSKDSQIFCGSSDGKIYKWQLVD 161
++ S D T +W H + + C + +F GSSD W +
Sbjct: 573 YFVTASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVHT 632
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK-LWT--------AEEDYGQEPIV 212
+ + + VN L P + + S + + +W + + + +
Sbjct: 633 GNCVRVFLGHTNS--VNCLAVSPDGRWLASGGEDGIICVWDIGSGRRLKSMRGHARASLY 690
Query: 213 DACFTRDCQCILTCSTDECLRLFD 236
F+RD +++ D +R++D
Sbjct: 691 SLAFSRDGTVLVSGCADNSVRVWD 714
>ASPGD|ASPL0000038644 [details] [associations]
symbol:AN10391 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
ProteinModelPortal:C8VHX7 EnsemblFungi:CADANIAT00009734 OMA:LQHTLEG
Uniprot:C8VHX7
Length = 577
Score = 220 (82.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 66/248 (26%), Positives = 113/248 (45%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C+Q ++ + A+ +V ++ D + D+ +K+W+ L T GH+ V +
Sbjct: 288 CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFS 347
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
DS +AS ASD +V +W+ TG H V V F+ DS ++ S S D+TV +W
Sbjct: 348 HDSRLLAS-ASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIW 406
Query: 125 DVKSRS-HHPIQCCLD-------SKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKA 175
D + S H ++ D S DSQ+ +SD K W S TL
Sbjct: 407 DTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL-EGHRDW 465
Query: 176 VVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDAC-FTRDCQCILTCST 228
V + + SH +R ++ V++W E+ G +V + F+ D + + + S
Sbjct: 466 VRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASN 525
Query: 229 DECLRLFD 236
D+ +R++D
Sbjct: 526 DQTVRIWD 533
Score = 193 (73.0 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 60/207 (28%), Positives = 95/207 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T++ +R+V F+ D S L SD +K+W+ L T GH V + DS
Sbjct: 333 TLEGHSDLVRSVIFSHD-SRLLASASDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS 391
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+AS + D +V +W+ TG H V V F+ DS ++ S S D+TV +WD
Sbjct: 392 QLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTG 451
Query: 128 SRS-HHPIQCCLD-------SKDSQIFCGSSDGKIYK-WQLVDSSQISTLI-HSVGKAVV 177
+ S H ++ D S DS++ +SD + + W S TL HS ++V
Sbjct: 452 TGSLQHTLEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHS---SLV 508
Query: 178 NSLC-SHPTRKHIMSACGNNVKLWTAE 203
S+ SH +R ++ V++W E
Sbjct: 509 TSVSFSHDSRLLASASNDQTVRIWDIE 535
Score = 183 (69.5 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 38/123 (30%), Positives = 63/123 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T++ + +R+V F+ D + D +K+W+ L T GH V + DS
Sbjct: 416 TLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDS 475
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+AS + D++V +W+ G H+S VT V F+ DS ++ S S D TV +WD++
Sbjct: 476 RLLASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASNDQTVRIWDIE 535
Query: 128 SRS 130
+RS
Sbjct: 536 ARS 538
Score = 175 (66.7 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 64/248 (25%), Positives = 112/248 (45%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPIQCCLD-------SKDSQIFC 147
H + V V ++ DS ++ S S D TV +WD ++ S H ++ D S DS++
Sbjct: 295 HEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLA 354
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW---TAEE 204
+SD + W S TL V + + SH ++ ++ + VK+W T
Sbjct: 355 SASDSTVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSL 413
Query: 205 DYGQEPIVD----ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCL 260
+ E D F+ D Q + + S D ++++D TG L +GH+ D+ + +
Sbjct: 414 QHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR--DW-VRSVI 470
Query: 261 DSKDSQIFCGSSDGKIYK-WQLVDSSQISTLI-HSVGKAVVNSLC-SHPTRKHIMSACGN 317
S DS++ +SD + + W S TL HS ++V S+ SH +R ++
Sbjct: 471 FSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHS---SLVTSVSFSHDSRLLASASNDQ 527
Query: 318 NVKLWTAE 325
V++W E
Sbjct: 528 TVRIWDIE 535
Score = 173 (66.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 66/259 (25%), Positives = 112/259 (43%)
Query: 40 WNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK 99
W+P L+ GH V + + DS +AS + D++V +W+ TG H+
Sbjct: 285 WSP----CLQALEGHEAAVLSVSYSHDSRLLASASDDRTVKIWDTETGSLQHTLEGHSDL 340
Query: 100 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-HHPIQCCLD-------SKDSQIFCGSSD 151
V V F+ DS ++ S S D+TV +WD + S H ++ D S DSQ+ +SD
Sbjct: 341 VRSVIFSHDSRLLASAS-DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASD 399
Query: 152 GKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW---TAEEDYG 207
K W S TL V + + SH ++ ++ + VK+W T +
Sbjct: 400 DSTVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHT 458
Query: 208 QEPIVD----ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSK 263
E D F+ D + + + S D +R++D G +GH S + S
Sbjct: 459 LEGHRDWVRSVIFSHDSRLLASASDDRTVRIWDTEKGSHKHTLEGHSS---LVTSVSFSH 515
Query: 264 DSQIFCGSSDGKIYK-WQL 281
DS++ +S+ + + W +
Sbjct: 516 DSRLLASASNDQTVRIWDI 534
Score = 138 (53.6 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 59/215 (27%), Positives = 95/215 (44%)
Query: 140 SKDSQIFCGSSDGKIYK-WQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNNV 197
S DS++ +SD + K W S TL HS V + + SH +R + SA + V
Sbjct: 305 SHDSRLLASASDDRTVKIWDTETGSLQHTLEGHS--DLVRSVIFSHDSRL-LASASDSTV 361
Query: 198 KLW---TAEEDYGQEPIVD----ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK 250
K+W T + E D F+ D Q + + S D ++++D TG L +GH+
Sbjct: 362 KIWDTGTGSLQHTLEGHRDWVRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTLEGHR 421
Query: 251 SGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 309
D+ + + S DSQ+ +SD K W S TL V + + SH +R
Sbjct: 422 --DW-VRSVIFSHDSQLLASASDDSTVKIWDTGTGSLQHTL-EGHRDWVRSVIFSHDSRL 477
Query: 310 HIMSACGNNVKLWTAEED---YGQAGLSSLYLNMS 341
++ V++W E+ + G SSL ++S
Sbjct: 478 LASASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVS 512
>TAIR|locus:2097435 [details] [associations]
symbol:WDR5a "AT3G49660" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007186 "G-protein coupled
receptor signaling pathway" evidence=ISS] [GO:0010228 "vegetative
to reproductive phase transition of meristem" evidence=IMP]
[GO:0042393 "histone binding" evidence=IDA] [GO:0048188
"Set1C/COMPASS complex" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010228 GO:GO:0042393
GO:GO:0048188 HSSP:P16649 KO:K14963 HOGENOM:HOG000091642
OMA:KLWKSDT IPI:IPI00547190 PIR:T46032 RefSeq:NP_190535.1
UniGene:At.35578 ProteinModelPortal:Q9M2Z2 SMR:Q9M2Z2 PaxDb:Q9M2Z2
PRIDE:Q9M2Z2 EnsemblPlants:AT3G49660.1 GeneID:824128
KEGG:ath:AT3G49660 TAIR:At3g49660 InParanoid:Q9M2Z2
PhylomeDB:Q9M2Z2 ProtClustDB:CLSN2684254 Genevestigator:Q9M2Z2
Uniprot:Q9M2Z2
Length = 317
Score = 211 (79.3 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 57/209 (27%), Positives = 97/209 (46%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
VQ + I V F+ D + ++ DK +KLW+ L+KT GH +
Sbjct: 64 VQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNP 123
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
S+ I SG+ D++V +W+VTTG+ ++ H+ VT V FN D S+++S S D +WD
Sbjct: 124 QSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWD 183
Query: 126 VKSRSHHPIQCCLDSKDSQ------------IFCGSSDGKIYKWQLVDSSQISTLI-HSV 172
S + H ++ +D ++ I G+ D + W + + + T H
Sbjct: 184 --SGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVN 241
Query: 173 GKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
+ ++S S K I+S +N V +W
Sbjct: 242 AQYCISSAFSVTNGKRIVSGSEDNCVHMW 270
Score = 210 (79.0 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 58/213 (27%), Positives = 101/213 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLW--NPYRNLL---LKTYGGHAHE 57
Y QT+ A+ +V+F+ DG + +DK I+ + N + + ++ + GH +
Sbjct: 14 YVHSQTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENG 73
Query: 58 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 117
++D + D+ I S + DK++ LW+V TG ++ H + CV FN S++++SGS
Sbjct: 74 ISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF 133
Query: 118 DNTVMMWDVKSR-------SHH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTL 168
D TV +WDV + +H P+ ++D + SS DG W + TL
Sbjct: 134 DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL 193
Query: 169 IHSVGKAVVNSLCSHPTRKHIM-SACGNNVKLW 200
I V + + P K I+ N ++LW
Sbjct: 194 IDDENPPV-SFVRFSPNGKFILVGTLDNTLRLW 225
Score = 187 (70.9 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 63/303 (20%), Positives = 132/303 (43%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTCV 103
+T H V+ + D +AS ++DK++ + + T +PV+ + H + ++ V
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLD--SKDSQIFCGSSDGKI 154
F+ D+ ++S S D T+ +WDV++ S H C++ + + I GS D +
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 155 YKWQLVDSSQISTL-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQEPIVD 213
W + + L HS V+ + + S+ ++W + + + ++D
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDF--NRDGSLIVSSSYDGLCRIWDSGTGHCVKTLID 195
Query: 214 -----ACFTR---DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
F R + + IL + D LRL++ ++ + L+ Y GH + + I +
Sbjct: 196 DENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNG 255
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGNNVKLWTA 324
+ S+ ++S ++ + + V+N C HPT I S + V++WT
Sbjct: 256 KRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVAC-HPTENLIASGSLDKTVRIWTQ 314
Query: 325 EED 327
+++
Sbjct: 315 KKE 317
Score = 171 (65.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 39/127 (30%), Positives = 66/127 (51%)
Query: 5 CVQT-IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VND 60
CV+T ID + + VRF+ +G + L D ++LWN LKTY GH + ++
Sbjct: 189 CVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISS 248
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT 120
A + + +I SG+ D V +WE+ + + +++ H V V + +++ SGS D T
Sbjct: 249 AFSVTNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKT 308
Query: 121 VMMWDVK 127
V +W K
Sbjct: 309 VRIWTQK 315
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 30/129 (23%), Positives = 63/129 (48%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE-VNDATA 63
C++ + + AV FN DGS ++ D ++W+ +KT + V+
Sbjct: 147 CLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRF 206
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVK--FN-EDSSVVISGSQDNT 120
+ + I G D ++ LW +++ + ++ + H + C+ F+ + ++SGS+DN
Sbjct: 207 SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNC 266
Query: 121 VMMWDVKSR 129
V MW++ S+
Sbjct: 267 VHMWELNSK 275
>MGI|MGI:1923896 [details] [associations]
symbol:Wdr38 "WD repeat domain 38" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1923896 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00700000104017
HSSP:P63005 EMBL:AL844588 HOGENOM:HOG000091642 EMBL:AK007246
EMBL:AK077027 EMBL:BC115629 IPI:IPI00112284 RefSeq:NP_083963.1
UniGene:Mm.358777 UniGene:Mm.477090 ProteinModelPortal:Q9D994
SMR:Q9D994 PRIDE:Q9D994 Ensembl:ENSMUST00000039535
Ensembl:ENSMUST00000112872 GeneID:76646 KEGG:mmu:76646
UCSC:uc008jnx.2 CTD:401551 HOVERGEN:HBG106736 InParanoid:Q9D994
OMA:VARAKCL OrthoDB:EOG4ZW5BD ChiTaRS:WDR38 NextBio:345540
Bgee:Q9D994 CleanEx:MM_WDR38 Genevestigator:Q9D994 Uniprot:Q9D994
Length = 303
Score = 208 (78.3 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 58/201 (28%), Positives = 94/201 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G +++ F+ DG + SD I+LW+ R+ L GH V + + DS Q+AS
Sbjct: 68 RGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLAS 127
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR--- 129
G DK I+WEV +G+ V H + F+ S + +GS D+TV +WD+++
Sbjct: 128 GGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPV 187
Query: 130 -SHHPIQ-------CCLDSKDSQIFCGSSDGKIYKWQ-LVDSSQISTLIHSVGKAVVNSL 180
S+H ++ C S + GS D I W+ ++ + H++ VNSL
Sbjct: 188 VSYHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIW---VNSL 244
Query: 181 CSHPTRKHIMSA-CGNNVKLW 200
P + SA VK+W
Sbjct: 245 AFSPDELKLASAGYSRTVKVW 265
Score = 169 (64.5 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 49/177 (27%), Positives = 76/177 (42%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ DG LT D + +W LL GH V + D IAS
Sbjct: 27 GEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIASS 86
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--RSH 131
+SD S+ LW+V + + + H V V F+ DS + SG D ++W+V+S R H
Sbjct: 87 SSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVH 146
Query: 132 HPIQCC--LDSKD-----SQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
+ C + S D + GS D ++ W L S+ + + H++ N C
Sbjct: 147 LLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSY-HNLEGHTGNISC 202
Score = 135 (52.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/134 (22%), Positives = 63/134 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C+ + Q ++ V F+ D + G DK+ +W + GH + + +
Sbjct: 102 CLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWEVQSGRRVHLLVGHCDSIQSSDFS 161
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWRE---HASKVTCVKFNEDSSVVISGSQDNTV 121
S +A+G+ D +V +W++ PV + H ++C+ ++ S ++ SGS D T+
Sbjct: 162 PTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSA-SGLLASGSWDKTI 220
Query: 122 MMWDVKSRSHHPIQ 135
+W + ++ P+Q
Sbjct: 221 CVWK-PTTNNLPLQ 233
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 57/252 (22%), Positives = 94/252 (37%)
Query: 90 VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHH-PIQCCLDSK 141
VR + +H +V C F+ D +++ S D V +W KS H P++ C S
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 142 DSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKL 199
D ++ SS D I W + S + L + V ++ P K + S +
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVL--KGHQRSVETVSFSPDSKQLASGGWDKRAIV 136
Query: 200 WTAEEDYGQEPIVDAC-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG 252
W + +V C F+ + T S D + ++D + Y +
Sbjct: 137 WEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASTPVVSYHNLEGH 196
Query: 253 DFRIECCLDSKDSQIFCGSSDGKIYKWQ-LVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 311
I C S + GS D I W+ ++ + H++ VNSL P +
Sbjct: 197 TGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIW---VNSLAFSPDELKL 253
Query: 312 MSA-CGNNVKLW 322
SA VK+W
Sbjct: 254 ASAGYSRTVKVW 265
Score = 121 (47.7 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 33/131 (25%), Positives = 63/131 (48%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 107
++ YG H EVN + + D + + + D V +W +G+ + R H V F+
Sbjct: 19 VRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLWRLAGHRGPVKSCCFSP 78
Query: 108 DSSVVISGSQDNTVMMWDV-KSRSHHPI---QCCLD----SKDS-QIFCGSSDGKIYKWQ 158
D ++ S S D+++ +WDV +S+ H + Q ++ S DS Q+ G D + W+
Sbjct: 79 DGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSVETVSFSPDSKQLASGGWDKRAIVWE 138
Query: 159 LVDSSQISTLI 169
+ ++ L+
Sbjct: 139 VQSGRRVHLLV 149
>UNIPROTKB|I3LSG8 [details] [associations]
symbol:I3LSG8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043531 "ADP binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR002182 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00931 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GeneTree:ENSGT00700000104017 ProteinModelPortal:I3LSG8
Ensembl:ENSSSCT00000028858 OMA:LRERVAC Uniprot:I3LSG8
Length = 994
Score = 179 (68.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 42/142 (29%), Positives = 75/142 (52%)
Query: 9 IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 68
I + + F+ D + TC DKK+K+WN L+++Y H+ +VN +S+
Sbjct: 389 IKAHEDEVLCCAFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSN 448
Query: 69 QI--ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+ A+G+SD + LW++ + H + V+ +F+ D ++ S S D T+ +WDV
Sbjct: 449 HLLLATGSSDYFLKLWDLNQKECRNTMFGHTNSVSHCRFSPDDKLLASCSADGTLKLWDV 508
Query: 127 KS----RSHHPIQCCLDSKDSQ 144
KS +S + Q L+S++SQ
Sbjct: 509 KSANERKSINVKQFFLNSEESQ 530
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 47/194 (24%), Positives = 92/194 (47%)
Query: 21 FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 80
F+ DG +CG+DK ++++ L H EV + D IA+ + DK V
Sbjct: 359 FSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDRFIATCSVDKKVK 418
Query: 81 LWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSRS-------H 131
+W TG+ V+ + EH+ +V C F +S+ ++ +GS D + +WD+ + H
Sbjct: 419 IWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDYFLKLWDLNQKECRNTMFGH 478
Query: 132 -HPIQCCLDSKDSQIFCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
+ + C S D ++ S+DG + W + +++ ++ +V + +NS S + +
Sbjct: 479 TNSVSHCRFSPDDKLLASCSADGTLKLWDVKSANERKSI--NVKQFFLNSEESQEDMEVM 536
Query: 190 MSACGNNVKLWTAE 203
+ C W+A+
Sbjct: 537 VKCCS-----WSAD 545
Score = 135 (52.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 49/207 (23%), Positives = 91/207 (43%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ +R ++F DG ++ D I++WN +++ + H V D +S++ S
Sbjct: 748 KNTVRHIQFTTDGKNVISSSDDSAIQVWN-WQSEETVSLQAHQETVKDFRLL-KNSRLLS 805
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW--DVKSRS 130
+ D +V +W + TG+ + + H V + D++ S S D T +W D+ S
Sbjct: 806 WSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDLLSPL 865
Query: 131 H----HP--IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIST---LIHSVGKAV---- 176
H H ++C S DS + G +G+I W + + + + ++ G A
Sbjct: 866 HELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGGAATHGGW 925
Query: 177 VNSLCSHPTRKHIMSACGNNVKLWTAE 203
V L P K ++SA G +K W +
Sbjct: 926 VTDLRFSPDGKMLVSA-GGYLKWWNVD 951
Score = 130 (50.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 37/120 (30%), Positives = 56/120 (46%)
Query: 209 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ + ACF+ D Q I +C D+ L++F TGE L E K H+ + CC S D +
Sbjct: 352 DAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHED---EVLCCAFSADDRFI 408
Query: 269 CGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 322
S D K+ W V + + + VN C H T H++ A G++ +KLW
Sbjct: 409 ATCSVDKKVKIWNSVTGELVQS--YDEHSEQVN--CCHFTNNSNHLLLATGSSDYFLKLW 464
Score = 124 (48.7 bits), Expect = 0.00023, P = 0.00023
Identities = 27/121 (22%), Positives = 57/121 (47%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
++ Q ++ R + S L+ D +K+WN + K + H V + D+
Sbjct: 784 SLQAHQETVKDFRL-LKNSRLLSWSFDGTVKVWNIITGRIEKDFVCHQDTVLSCDISPDA 842
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
++ +S ++DK+ +W P+ R H V C F+ DS+++ +G + + +W+V
Sbjct: 843 TKFSSTSADKTAKIWSFDLLSPLHELRGHKGCVRCSAFSVDSTLLATGDDNGEIRIWNVS 902
Query: 128 S 128
+
Sbjct: 903 N 903
Score = 123 (48.4 bits), Expect = 0.00029, P = 0.00029
Identities = 41/170 (24%), Positives = 72/170 (42%)
Query: 44 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
+NL H V A + D +IAS +DK++ +++ TG+ + + H +V C
Sbjct: 340 KNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCC 399
Query: 104 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDSQ---IFCGSSDG 152
F+ D + + S D V +W+ V+S H + CC + +S + GSSD
Sbjct: 400 AFSADDRFIATCSVDKKVKIWNSVTGELVQSYDEHSEQVNCCHFTNNSNHLLLATGSSDY 459
Query: 153 KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLW 200
+ W L +T+ S C ++++C +KLW
Sbjct: 460 FLKLWDLNQKECRNTMFGHTNSV---SHCRFSPDDKLLASCSADGTLKLW 506
Score = 89 (36.4 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 53/228 (23%), Positives = 90/228 (39%)
Query: 127 KSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
K+ H IQ D K+ + S D I W +S H + V + +R
Sbjct: 748 KNTVRH-IQFTTDGKN--VISSSDDSAIQVWNWQSEETVSLQAHQ--ETVKDFRLLKNSR 802
Query: 187 KHIMSACGNNVKLWTA-----EEDY--GQEPIVDACFTRDCQCILTCSTDECLRLFDKAT 239
S G VK+W E+D+ Q+ ++ + D + S D+ +++
Sbjct: 803 LLSWSFDGT-VKVWNIITGRIEKDFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFDL 861
Query: 240 GELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIST---LIHSVG 295
L E +GHK + C S DS + G +G+I W + + + + ++ G
Sbjct: 862 LSPLHELRGHKGC---VRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHSCAPVLVEGG 918
Query: 296 KAV----VNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQAGLSSLYLN 339
A V L P K ++SA G +K W D G++ + + Y N
Sbjct: 919 AATHGGWVTDLRFSPDGKMLVSA-GGYLKWWNV--DSGKS-IQTFYTN 962
Score = 60 (26.2 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 29/132 (21%), Positives = 47/132 (35%)
Query: 173 GKAVVNSL--CSHPTRKHIMSACGNN----VKLWTAEEDYGQEPIVDACFTRDC-----Q 221
G V+ L CS P K + A G +K + + ++ I D F C +
Sbjct: 659 GAVSVSKLQSCSQPGEKELKVATGEEFCLQIKRAASPQKRKKKMIPDQSFMVSCIQGTSE 718
Query: 222 C-ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 280
C +L L++ + L + HK+ I+ D K+ + S D I W
Sbjct: 719 CFVLGDVYGHSLKVLELLNNRLFQSRTRHKNTVRHIQFTTDGKN--VISSSDDSAIQVWN 776
Query: 281 LVDSSQISTLIH 292
+S H
Sbjct: 777 WQSEETVSLQAH 788
Score = 37 (18.1 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+ CC D+ S + G D ++K +++ Q +H++
Sbjct: 174 LNCCSDTTGSNVSFGFQD--LHK-KMITQFQRHHRLHTL 209
>TAIR|locus:2005539 [details] [associations]
symbol:PRL1 "AT4G15900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009870 "defense
response signaling pathway, resistance gene-dependent"
evidence=IMP] [GO:0010204 "defense response signaling pathway,
resistance gene-independent" evidence=IMP] [GO:0042742 "defense
response to bacterium" evidence=IMP] [GO:0050832 "defense response
to fungus" evidence=IMP] [GO:0006508 "proteolysis" evidence=IMP]
[GO:0009755 "hormone-mediated signaling pathway" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0010182 "sugar
mediated signaling pathway" evidence=RCA;IMP] [GO:0048364 "root
development" evidence=IMP] [GO:0048366 "leaf development"
evidence=RCA;IMP] [GO:0048825 "cotyledon development"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IPI] [GO:0000278 "mitotic cell cycle" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0050826 "response to freezing" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0009749 "response to glucose stimulus"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 GO:GO:0005634 GO:GO:0045892
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050832
GO:GO:0009749 GO:GO:0042742 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006508 GO:GO:0045087 GO:GO:0048364
GO:GO:0010182 GO:GO:0016567 GO:GO:0009870 GO:GO:0009755
GO:GO:0048366 GO:GO:0048825 EMBL:Z97339 GO:GO:0010204 GO:GO:0080008
EMBL:AL161542 HOGENOM:HOG000207595 KO:K12862 OMA:ITAEADK
EMBL:X82824 EMBL:X82825 IPI:IPI00524936 PIR:S49820
RefSeq:NP_193325.1 UniGene:At.103 ProteinModelPortal:Q42384
SMR:Q42384 IntAct:Q42384 STRING:Q42384 PaxDb:Q42384 PRIDE:Q42384
EnsemblPlants:AT4G15900.1 GeneID:827272 KEGG:ath:AT4G15900
GeneFarm:2847 TAIR:At4g15900 InParanoid:Q42384 PhylomeDB:Q42384
ProtClustDB:CLSN2685622 Genevestigator:Q42384 GermOnline:AT4G15900
Uniprot:Q42384
Length = 486
Score = 211 (79.3 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 51/194 (26%), Positives = 89/194 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R+V F+ + T +D+ IK+W+ +L T GH +V + + + S
Sbjct: 177 GWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSA 236
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR---- 129
DK V W++ + +R + H S V C+ + V+++G +D+ +WD++++
Sbjct: 237 GDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRVWDIRTKMQIF 296
Query: 130 ---SHHPIQCCLDSK--DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
H C + ++ D Q+ GS D I W L +STL H K V ++ HP
Sbjct: 297 ALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHH--KKSVRAMTLHP 354
Query: 185 TRKHIMSACGNNVK 198
SA +N K
Sbjct: 355 KENAFASASADNTK 368
Score = 40 (19.1 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLF---DKATGE 241
I AC+ ++TC D+ ++++ + AT E
Sbjct: 438 IYAACYDNTGSRLVTCEADKTIKMWKEDENATPE 471
>UNIPROTKB|P63247 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0007165 "signal
transduction" evidence=TAS] [GO:0001891 "phagocytic cup"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0007165 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:0030178
GO:GO:2001244 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753
CTD:10399 HOVERGEN:HBG000277 OrthoDB:EOG4933J5 EMBL:M24193
EMBL:AY393848 EMBL:AY694127 EMBL:AB268588 IPI:IPI00596315
PIR:A33928 RefSeq:NP_001004378.1 UniGene:Gga.7066
ProteinModelPortal:P63247 SMR:P63247 STRING:P63247 PRIDE:P63247
GeneID:417044 KEGG:gga:417044 InParanoid:A5HUK6 NextBio:20820423
Uniprot:P63247
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|P63243 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9913 "Bos taurus" [GO:0030971 "receptor
tyrosine kinase binding" evidence=ISS] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=ISS] [GO:0050765
"negative regulation of phagocytosis" evidence=ISS] [GO:0043547
"positive regulation of GTPase activity" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001891 "phagocytic cup" evidence=ISS] [GO:0042169 "SH2 domain
binding" evidence=ISS] [GO:0005080 "protein kinase C binding"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=ISS] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0030335 "positive regulation of cell migration" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=ISS] [GO:2000543 "positive regulation of gastrulation"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0043025 "neuronal cell body" evidence=ISS]
[GO:0043204 "perikaryon" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0019903 "protein phosphatase
binding" evidence=IEA] [GO:0008656 "cysteine-type endopeptidase
activator activity involved in apoptotic process" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AJ132860 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0030971 GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
GO:GO:0032464 GO:GO:2000114 GO:GO:0051302 GO:GO:2000543
GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
EMBL:BC102286 IPI:IPI00700792 RefSeq:NP_786996.1 UniGene:Bt.2981
ProteinModelPortal:P63243 SMR:P63243 STRING:P63243 PRIDE:P63243
Ensembl:ENSBTAT00000026183 GeneID:327682 KEGG:bta:327682 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 InParanoid:P63243
OrthoDB:EOG4933J5 NextBio:20810147 ArrayExpress:P63243
Uniprot:P63243
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|F1PLR0 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2001244 "positive regulation of intrinsic
apoptotic signaling pathway" evidence=IEA] [GO:0051898 "negative
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0050765
"negative regulation of phagocytosis" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043547
"positive regulation of GTPase activity" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0032464 "positive regulation of
protein homooligomerization" evidence=IEA] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030971 "receptor tyrosine kinase
binding" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IEA] [GO:0008200 "ion channel inhibitor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001934 "positive regulation of protein phosphorylation"
evidence=IEA] [GO:0001891 "phagocytic cup" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547
GO:GO:0043025 GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AAEX03007665
ProteinModelPortal:F1PLR0 Ensembl:ENSCAFT00000020233 Uniprot:F1PLR0
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|P63244 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA] [GO:0019048
"virus-host interaction" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0090003 "regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0043204 "perikaryon" evidence=IEA]
[GO:0005102 "receptor binding" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0030496 "midbody" evidence=IDA] [GO:0043025
"neuronal cell body" evidence=ISS] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0030971 "receptor tyrosine kinase binding"
evidence=IDA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IDA] [GO:0051726 "regulation of cell cycle"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005080 "protein kinase C binding"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0015935 "small ribosomal
subunit" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP;IDA] [GO:0030335 "positive regulation of cell
migration" evidence=IDA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IDA] [GO:0001891 "phagocytic cup" evidence=IDA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IMP]
[GO:0008200 "ion channel inhibitor activity" evidence=ISS]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2001244 "positive regulation of
intrinsic apoptotic signaling pathway" evidence=IMP] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IMP] [GO:0051898 "negative regulation
of protein kinase B signaling cascade" evidence=IMP] [GO:0008656
"cysteine-type endopeptidase activator activity involved in
apoptotic process" evidence=IMP] [GO:0017148 "negative regulation
of translation" evidence=ISS] [GO:0061099 "negative regulation of
protein tyrosine kinase activity" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
Pathway_Interaction_DB:igf1_pathway GO:GO:0019048 GO:GO:0005080
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
Pathway_Interaction_DB:syndecan_2_pathway GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511 GO:GO:0007049
GO:GO:0043065 GO:GO:0051726 GO:GO:0001891 GO:GO:0042169
Pathway_Interaction_DB:tnfpathway GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0008656 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0030971
GO:GO:0030178 GO:GO:2001244 GO:GO:0007369
Pathway_Interaction_DB:hif1apathway EMBL:CH471165 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:0051898 GO:GO:2000543
GO:GO:0030292 KO:K14753 OMA:IRVWQVM CTD:10399 HOVERGEN:HBG000277
ChiTaRS:GNB2L1 EMBL:M24194 EMBL:AY159316 EMBL:AY336089
EMBL:AK095666 EMBL:CR456978 EMBL:CR541909 EMBL:AK222488
EMBL:BC000214 EMBL:BC000366 EMBL:BC010119 EMBL:BC014256
EMBL:BC014788 EMBL:BC017287 EMBL:BC019093 EMBL:BC019362
EMBL:BC021993 EMBL:BC032006 IPI:IPI00848226 PIR:B33928
RefSeq:NP_006089.1 UniGene:Hs.5662 PDB:4AOW PDBsum:4AOW
ProteinModelPortal:P63244 SMR:P63244 IntAct:P63244 MINT:MINT-105673
STRING:P63244 PhosphoSite:P63244 DMDM:54037168
REPRODUCTION-2DPAGE:IPI00848226 REPRODUCTION-2DPAGE:P63244
PaxDb:P63244 PRIDE:P63244 DNASU:10399 Ensembl:ENST00000512805
GeneID:10399 KEGG:hsa:10399 UCSC:uc003mni.1 GeneCards:GC05M180663
HGNC:HGNC:4399 HPA:CAB004288 HPA:HPA021676 MIM:176981
neXtProt:NX_P63244 PharmGKB:PA28779 InParanoid:P63244
GenomeRNAi:10399 NextBio:39404 ArrayExpress:P63244 Bgee:P63244
CleanEx:HS_GNB2L1 Genevestigator:P63244 GermOnline:ENSG00000204628
GO:GO:0015935 Uniprot:P63244
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|P63246 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISS]
[GO:0005080 "protein kinase C binding" evidence=ISS] [GO:0030496
"midbody" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0001891 "phagocytic cup"
evidence=ISS] [GO:0042169 "SH2 domain binding" evidence=ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
[GO:0050765 "negative regulation of phagocytosis" evidence=ISS]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISS] [GO:0032436 "positive regulation
of proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:0051302
"regulation of cell division" evidence=ISS] [GO:0032880 "regulation
of protein localization" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0007369 "gastrulation" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=IEA] [GO:0006417 "regulation of translation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0006417 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
GO:GO:0043547 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0032880 GO:GO:0048511
GO:GO:0007049 GO:GO:0043065 GO:GO:0051726 GO:GO:0001891
GO:GO:0042169 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0030971 GO:GO:0030178
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 KO:K14753 CTD:10399 HOVERGEN:HBG000277
EMBL:Z33879 EMBL:AF146043 PIR:S45054 RefSeq:NP_999497.1
UniGene:Ssc.12515 ProteinModelPortal:P63246 SMR:P63246 PRIDE:P63246
GeneID:397605 KEGG:ssc:397605 Uniprot:P63246
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|B1N1C2 [details] [associations]
symbol:GNB2L1 "Uncharacterized protein" species:9103
"Meleagris gallopavo" [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043025 "neuronal cell body" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0005737
GO:GO:0048471 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:2001244 GO:GO:0032464 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
EMBL:DQ993255 RefSeq:XP_003211191.1 UniGene:Mga.4509
ProteinModelPortal:B1N1C2 SMR:B1N1C2 PRIDE:B1N1C2
Ensembl:ENSMGAT00000000634 GeneID:100541375 KEGG:mgp:100541375
Uniprot:B1N1C2
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|Q4R7Y4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9541 "Macaca fascicularis" [GO:0001891
"phagocytic cup" evidence=ISS] [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005080 "protein kinase
C binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0030178 "negative
regulation of Wnt receptor signaling pathway" evidence=ISS]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=ISS] [GO:0030308 "negative regulation of cell growth"
evidence=ISS] [GO:0030335 "positive regulation of cell migration"
evidence=ISS] [GO:0030496 "midbody" evidence=ISS] [GO:0030971
"receptor tyrosine kinase binding" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=ISS] [GO:0032880
"regulation of protein localization" evidence=ISS] [GO:0042169 "SH2
domain binding" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISS] [GO:0043547 "positive regulation of GTPase
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0050765 "negative regulation of
phagocytosis" evidence=ISS] [GO:0051302 "regulation of cell
division" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISS] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0006417 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0043547 GO:GO:0043025
GO:GO:0030425 GO:GO:0043204 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0030971 GO:GO:0030178 GO:GO:0007369 GO:GO:0032464
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 GO:GO:0030292
HOVERGEN:HBG000277 EMBL:AB168677 ProteinModelPortal:Q4R7Y4
SMR:Q4R7Y4 PRIDE:Q4R7Y4 Uniprot:Q4R7Y4
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|Q5U275 [details] [associations]
symbol:gnb2l1 "LOC495666 protein" species:8355 "Xenopus
laevis" [GO:0005737 "cytoplasm" evidence=ISS] [GO:0043025 "neuronal
cell body" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 KO:K14753 HOVERGEN:HBG000277 EMBL:BC086231
RefSeq:NP_001088625.1 UniGene:Xl.49445 ProteinModelPortal:Q5U275
SMR:Q5U275 PRIDE:Q5U275 GeneID:495666 KEGG:xla:495666
Xenbase:XB-GENE-5927586 Uniprot:Q5U275
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>MGI|MGI:101849 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2 like 1" species:10090 "Mus musculus"
[GO:0001891 "phagocytic cup" evidence=ISO] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO] [GO:0004872
"receptor activity" evidence=ISA] [GO:0005080 "protein kinase C
binding" evidence=ISO;ISA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007369
"gastrulation" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISA] [GO:0008200 "ion channel inhibitor activity"
evidence=IDA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=ISO] [GO:0015935
"small ribosomal subunit" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=ISO] [GO:0030308 "negative regulation of cell
growth" evidence=ISO] [GO:0030335 "positive regulation of cell
migration" evidence=ISO] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030496 "midbody" evidence=ISO] [GO:0030971 "receptor tyrosine
kinase binding" evidence=ISO] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0032464 "positive regulation of protein
homooligomerization" evidence=ISO] [GO:0035556 "intracellular
signal transduction" evidence=ISA] [GO:0040008 "regulation of
growth" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=ISO]
[GO:0043547 "positive regulation of GTPase activity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0050765 "negative
regulation of phagocytosis" evidence=ISO] [GO:0051726 "regulation
of cell cycle" evidence=ISO] [GO:0051898 "negative regulation of
protein kinase B signaling cascade" evidence=ISO] [GO:0061099
"negative regulation of protein tyrosine kinase activity"
evidence=ISO] [GO:0090003 "regulation of establishment of protein
localization to plasma membrane" evidence=ISO] [GO:2001244
"positive regulation of intrinsic apoptotic signaling pathway"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:101849 GO:GO:0005634 GO:GO:0048471
GO:GO:0006915 GO:GO:0005080 GO:GO:0008104 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148 GO:GO:0043547
GO:GO:0035556 GO:GO:0043025 GO:GO:0030425 GO:GO:0043204
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004872
GO:GO:0032880 GO:GO:0048511 GO:GO:0007049 GO:GO:0043065
GO:GO:0051726 GO:GO:0001891 GO:GO:0042169 GO:GO:0030335
GO:GO:0050765 GO:GO:0001934 GO:GO:0030496 GO:GO:0032436
GO:GO:0008200 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 EMBL:CH466575
GO:GO:0051302 GO:GO:2000543 GO:GO:0030292 KO:K14753 OMA:IRVWQVM
CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 ChiTaRS:GNB2L1 GO:GO:0015935 EMBL:D29802
EMBL:X75313 EMBL:AK002493 EMBL:AK012242 EMBL:AK017772 EMBL:AK051226
EMBL:AK159797 EMBL:AK160528 EMBL:AK160739 EMBL:AK161234
EMBL:AK166417 EMBL:AK166786 EMBL:AK166800 EMBL:AK166889
EMBL:AK166945 EMBL:AK168086 EMBL:AK168096 EMBL:AK168196
EMBL:AK168349 EMBL:AL645849 EMBL:BC046760 EMBL:AF295529
IPI:IPI00317740 PIR:S38398 RefSeq:NP_032169.1 UniGene:Mm.5305
ProteinModelPortal:P68040 SMR:P68040 IntAct:P68040 STRING:P68040
REPRODUCTION-2DPAGE:P68040 SWISS-2DPAGE:P68040 PaxDb:P68040
PRIDE:P68040 Ensembl:ENSMUST00000020640 GeneID:14694 KEGG:mmu:14694
UCSC:uc007ipa.1 InParanoid:Q9CSQ0 NextBio:286639 Bgee:P68040
Genevestigator:P68040 GermOnline:ENSMUSG00000020372 Uniprot:P68040
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>RGD|69229 [details] [associations]
symbol:Gnb2l1 "guanine nucleotide binding protein (G protein),
beta polypeptide 2 like 1" species:10116 "Rattus norvegicus"
[GO:0001891 "phagocytic cup" evidence=ISO;ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISO;ISS] [GO:0005080
"protein kinase C binding" evidence=IC;ISO;IDA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006919 "activation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=ISO] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007205 "protein kinase C-activating
G-protein coupled receptor signaling pathway" evidence=TAS]
[GO:0007369 "gastrulation" evidence=IEA] [GO:0008200 "ion channel
inhibitor activity" evidence=IEA;ISO] [GO:0008656 "cysteine-type
endopeptidase activator activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0015935 "small ribosomal subunit"
evidence=IDA] [GO:0017148 "negative regulation of translation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISS] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=ISO;ISS] [GO:0030308 "negative
regulation of cell growth" evidence=ISO;ISS] [GO:0030335 "positive
regulation of cell migration" evidence=ISO;ISS] [GO:0030425
"dendrite" evidence=IEA;ISO] [GO:0030496 "midbody" evidence=ISO;ISS]
[GO:0030971 "receptor tyrosine kinase binding" evidence=ISO;ISS]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0032464 "positive
regulation of protein homooligomerization" evidence=ISO;ISS]
[GO:0032880 "regulation of protein localization" evidence=ISS]
[GO:0042169 "SH2 domain binding" evidence=ISO;ISS] [GO:0043025
"neuronal cell body" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0043204
"perikaryon" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=ISO;ISS] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO;ISS] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=ISO;ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISO;ISS] [GO:0051898 "negative regulation of protein kinase
B signaling cascade" evidence=IEA;ISO] [GO:0061099 "negative
regulation of protein tyrosine kinase activity" evidence=ISO]
[GO:0090003 "regulation of establishment of protein localization to
plasma membrane" evidence=IMP] [GO:2000114 "regulation of
establishment of cell polarity" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:69229 GO:GO:0005634 GO:GO:0048471 GO:GO:0006915
GO:GO:0005080 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 GO:GO:0017148
GO:GO:0043547 GO:GO:0007205 GO:GO:0043025 GO:GO:0030425
GO:GO:0043204 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 GO:GO:0007049 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0042169 GO:GO:0030335 GO:GO:0050765
GO:GO:0001934 GO:GO:0030496 GO:GO:0032436 GO:GO:0008200
GO:GO:0090003 GO:GO:0030971 GO:GO:0030178 GO:GO:2001244
GO:GO:0007369 GO:GO:0032464 GO:GO:2000114 GO:GO:0051302
GO:GO:2000543 GO:GO:0030292 HOGENOM:HOG000091643 KO:K14753 CTD:10399
GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277 OrthoDB:EOG4933J5
GO:GO:0015935 EMBL:U03390 EMBL:BC063809 IPI:IPI00231134 PIR:A36986
RefSeq:NP_570090.2 RefSeq:XP_003751228.1 UniGene:Rn.55487
ProteinModelPortal:P63245 SMR:P63245 IntAct:P63245 MINT:MINT-4095812
STRING:P63245 PhosphoSite:P63245 PRIDE:P63245
Ensembl:ENSRNOT00000003334 GeneID:100911540 GeneID:83427
KEGG:rno:100911540 KEGG:rno:83427 UCSC:RGD:69229 InParanoid:P63245
NextBio:615845 Genevestigator:P63245 GermOnline:ENSRNOG00000002390
Uniprot:P63245
Length = 317
Score = 206 (77.6 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 181
Score = 142 (55.0 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
Score = 121 (47.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 11 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 68
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 69 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 128
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 129 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 177
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 212 (79.7 bits), Expect = 7.6e-15, P = 7.6e-15
Identities = 58/200 (29%), Positives = 84/200 (42%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F+ DG + T DK IK+WN YR L + H H V A + D I S +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHH 132
DK++ +W+ T Q V + + V FN + + + S D+TV +WD+ K H+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 133 PIQC----CLDSKDS--QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
+ C+ S I SSDG + L++ I TL G S S
Sbjct: 225 QVHSGGVNCVSFHPSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF-SKGGE 283
Query: 187 KHIMSACGNNVKLWTAEEDY 206
V LW DY
Sbjct: 284 LFSSGGADTQVLLWRTNFDY 303
Score = 193 (73.0 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 70/286 (24%), Positives = 120/286 (41%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ AI +V F+ G T D + LWN Y GH V + + +AS
Sbjct: 18 KAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFSPLGNLLAS 77
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSR-- 129
+ D++V LW ++ H + V V F+ D + + S+D ++ +W++ + R
Sbjct: 78 ASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFL 137
Query: 130 ----SH-HPIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSH 183
H H ++C S D ++ S+ K K W + ++ SVG A N + +
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA--NFVDFN 195
Query: 184 PTRKHIMSACGNN-VKLWTAE-----EDYGQEPIVDAC--FTRDCQCILTCSTDECLRLF 235
P I SA ++ VK+W + Y C F I+T S+D L++
Sbjct: 196 PNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYIITASSDGTLKIL 255
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 280
D G L+ +GH F + SK ++F G +D ++ W+
Sbjct: 256 DLLEGRLIYTLQGHTGPVFTVSF---SKGGELFSSGGADTQVLLWR 298
Score = 158 (60.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 68/302 (22%), Positives = 116/302 (38%)
Query: 46 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 105
+L + + GH + + Q+A+ + D ++LW R+ H VT V+F
Sbjct: 9 VLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQF 68
Query: 106 NEDSSVVISGSQDNTVMMW--DVKSRSH----H--PIQCCLDSKDSQIFCGSSDGKIYK- 156
+ +++ S S+D TV +W D + +S H P++ S D Q +S+ K K
Sbjct: 69 SPLGNLLASASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 157 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEEDYGQEPIVDA 214
W + + +L V P + I+S C + +K+W D+
Sbjct: 129 WNMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVS-CSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 215 C-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDSKDSQ 266
F + CI + +D ++++D +LL+ Y+ H G + C +
Sbjct: 186 VGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG---VNCVSFHPSGNY 242
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 326
I SSDG + L++ I TL G S S V LW
Sbjct: 243 IITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF-SKGGELFSSGGADTQVLLWRTNF 301
Query: 327 DY 328
DY
Sbjct: 302 DY 303
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 32/120 (26%), Positives = 57/120 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV G V FN +G+ + GSD +K+W+ N LL+ Y H+ VN +
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ I + +SD ++ + ++ G+ + + H V V F++ + SG D V++W
Sbjct: 238 PSGNYIITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFSSGGADTQVLLW 297
>UNIPROTKB|G8JL27 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9031 "Gallus gallus" [GO:0001891 "phagocytic
cup" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008200 "ion channel inhibitor activity" evidence=IEA]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0030292 "protein tyrosine
kinase inhibitor activity" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0030335 "positive
regulation of cell migration" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0030971
"receptor tyrosine kinase binding" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0032464 "positive regulation
of protein homooligomerization" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0050765 "negative regulation of
phagocytosis" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0051898 "negative regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:2001244 "positive regulation
of intrinsic apoptotic signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 EMBL:AADN02030122
Ensembl:ENSGALT00000000171 Uniprot:G8JL27
Length = 320
Score = 206 (77.6 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 77 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 136
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 137 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 195
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 196 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 252
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 253 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 297
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 44/151 (29%), Positives = 72/151 (47%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 35 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 94
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 95 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 154
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 155 SCVRFSPNSSNPIIVSCGW-DKLVKVWNLAN 184
Score = 142 (55.0 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 51/211 (24%), Positives = 93/211 (44%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 63 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 120
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ ++++
Sbjct: 121 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 180
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 181 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 234
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 235 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 265
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 154 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 212
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 213 GGKDGQAMLWDLNEGK 228
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 45/169 (26%), Positives = 74/169 (43%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTC 102
LK + G ++ AT I S + DK++I+W++T G P R R H+ V+
Sbjct: 14 LKGHNGWVTQI--ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSD 71
Query: 103 VKFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGK 153
V + D +SGS D T+ +WD+ + + H + S + QI GS D
Sbjct: 72 VVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKT 131
Query: 154 IYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW 200
I W + + + S + V S + I+ +CG + VK+W
Sbjct: 132 IKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVW 180
>RGD|620575 [details] [associations]
symbol:Apaf1 "apoptotic peptidase activating factor 1"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP] [GO:0001843 "neural tube closure" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006309 "apoptotic DNA fragmentation" evidence=ISO] [GO:0006917
"induction of apoptosis" evidence=IDA] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006952 "defense response" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0007420 "brain development" evidence=ISO;IEP] [GO:0007568
"aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008635 "activation of cysteine-type
endopeptidase activity involved in apoptotic process by cytochrome
c" evidence=ISO] [GO:0010659 "cardiac muscle cell apoptotic
process" evidence=IMP] [GO:0010952 "positive regulation of
peptidase activity" evidence=ISO] [GO:0016505 "apoptotic protease
activator activity" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEP] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0031072 "heat shock protein binding"
evidence=IPI] [GO:0034349 "glial cell apoptotic process"
evidence=IEP] [GO:0042802 "identical protein binding"
evidence=ISO;IDA] [GO:0043293 "apoptosome" evidence=ISO;IDA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IDA] [GO:0051402 "neuron apoptotic
process" evidence=ISO] [GO:0071560 "cellular response to
transforming growth factor beta stimulus" evidence=IDA] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 RGD:620575 GO:GO:0005524 GO:GO:0007420 GO:GO:0030154
GO:GO:0006952 GO:GO:0006917 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0071560 GO:GO:0007568
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051260
GO:GO:0001666 GO:GO:0007584 GO:GO:0043531 GO:GO:0042802
Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986 GO:GO:0043293
CTD:317 HOVERGEN:HBG018730 KO:K02084 InterPro:IPR017251
PIRSF:PIRSF037646 EMBL:AF320222 IPI:IPI00324110 RefSeq:NP_076469.1
UniGene:Rn.64522 ProteinModelPortal:Q9EPV5 SMR:Q9EPV5
MINT:MINT-3370020 STRING:Q9EPV5 PRIDE:Q9EPV5 GeneID:78963
KEGG:rno:78963 UCSC:RGD:620575 InParanoid:Q9EPV5 NextBio:614396
Genevestigator:Q9EPV5 GermOnline:ENSRNOG00000008022 GO:GO:0010659
GO:GO:0034349 Uniprot:Q9EPV5
Length = 1249
Score = 173 (66.0 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 37/122 (30%), Positives = 63/122 (51%)
Query: 9 IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 68
I + + F+ D SY TC DKK+K+W+ L+ TY H+ +VN S+
Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSN 712
Query: 69 QI--ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+ A+G++D + LW++ + H + VT +F+ D ++ S S D T+ +WDV
Sbjct: 713 HLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDV 772
Query: 127 KS 128
+S
Sbjct: 773 RS 774
Score = 168 (64.2 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 41/155 (26%), Positives = 76/155 (49%)
Query: 21 FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 80
F+ DG +CG+DK ++++ L H EV + D S IA+ + DK V
Sbjct: 623 FSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVK 682
Query: 81 LWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSRS-------H 131
+W+ TG+ V + EH+ +V C F S+ ++ +GS D+ + +WD+ + H
Sbjct: 683 IWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGH 742
Query: 132 -HPIQCCLDSKDSQIFCG-SSDGKIYKWQLVDSSQ 164
+ + C S D ++ S+DG + W + +++
Sbjct: 743 TNSVTHCRFSPDDELLASCSADGTLKLWDVRSANE 777
Score = 150 (57.9 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 53/202 (26%), Positives = 88/202 (43%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
A+R ++F DG ++ D I++WN ++ H V D DS ++ S +
Sbjct: 1005 AVRHIQFTADGKTLISSSEDSVIQVWN-WQTEEYVFLQAHQETVKDFRLLRDS-RLLSWS 1062
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW--DVKSRSH- 131
D +V +W V TG+ R + H V + D++ S S D T +W ++ S H
Sbjct: 1063 FDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHE 1122
Query: 132 ---HP--IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQI---STLIHSVGKAV----VN 178
H ++C S D + G +G+I W + D + + + G A V
Sbjct: 1123 LKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVT 1182
Query: 179 SLCSHPTRKHIMSACGNNVKLW 200
+C P RK ++SA G +K W
Sbjct: 1183 DVCFSPDRKMLVSA-GGYLKWW 1203
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/120 (34%), Positives = 60/120 (50%)
Query: 209 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDSKDSQI 267
+ + ACF++D Q I +C D+ L++F TGE L + K H+ + CC S DS I
Sbjct: 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED---EVLCCAFSSDDSYI 672
Query: 268 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 322
S D K+ W DS L+H+ + C H T K H++ A G+N +KLW
Sbjct: 673 ATCSVDKKVKIW---DSGT-GKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW 728
Score = 129 (50.5 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 42/171 (24%), Positives = 76/171 (44%)
Query: 44 RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCV 103
+NL H V A + D +IAS +DK++ +++ TG+ + + H +V C
Sbjct: 604 KNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCC 663
Query: 104 KFNEDSSVVISGSQDNTVMMWD------VKSRSHHP--IQCC-LDSKDSQIFC--GSSDG 152
F+ D S + + S D V +WD V + H + CC +K + + GS+D
Sbjct: 664 AFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDS 723
Query: 153 KIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACG--NNVKLW 200
+ W L +T+ H+ +V + C ++++C +KLW
Sbjct: 724 FLKLWDLNQKECRNTMFGHT--NSVTH--CRFSPDDELLASCSADGTLKLW 770
Score = 94 (38.1 bits), Expect = 9.7e-15, Sum P(2) = 9.7e-15
Identities = 54/234 (23%), Positives = 87/234 (37%)
Query: 106 NEDSSVVISGSQDNTVMMWDV--KSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSS 163
+E+ ++ I +N V + K H IQ D K + S D I W
Sbjct: 980 DEEGAIKIIELPNNRVFSSGIGHKKAVRH-IQFTADGKT--LISSSEDSVIQVWNWQTEE 1036
Query: 164 QISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTA-----EEDYG--QEPIVDACF 216
+ H + V + +R S G VK+W E D+ Q ++
Sbjct: 1037 YVFLQAHQ--ETVKDFRLLRDSRLLSWSFDGT-VKVWNVITGRIERDFTCHQGTVLSCAI 1093
Query: 217 TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGK 275
+ D + S D+ +++ L E KGH S + C S D + G +G+
Sbjct: 1094 SSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSC---VRCSAFSLDGILLATGDDNGE 1150
Query: 276 IYKWQLVDSSQI---STLIHSVGKAV----VNSLCSHPTRKHIMSACGNNVKLW 322
I W + D + + + G A V +C P RK ++SA G +K W
Sbjct: 1151 IRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSA-GGYLKWW 1203
Score = 90 (36.7 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 25/112 (22%), Positives = 45/112 (40%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
++ ++ DG + +K + L LL + + GH + + S
Sbjct: 801 VKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALS 860
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
V LW + + V R H S V V F+ D S ++ S D T+ +W+ +
Sbjct: 861 QYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETR 912
>UNIPROTKB|O42249 [details] [associations]
symbol:gnb2l1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:8128 "Oreochromis niloticus" [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISS] [GO:0032880 "regulation of protein localization"
evidence=ISS] [GO:0051302 "regulation of cell division"
evidence=ISS] [GO:2000114 "regulation of establishment of cell
polarity" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0032880 GO:GO:0030178 GO:GO:2000114
GO:GO:0051302 GO:GO:2000543 HOVERGEN:HBG000277 EMBL:AF025331
UniGene:Oni.25 ProteinModelPortal:O42249 SMR:O42249 PRIDE:O42249
Uniprot:O42249
Length = 317
Score = 205 (77.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 55/193 (28%), Positives = 95/193 (49%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ L + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 84 VTTGQPVRRWRE--HASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G ++ H V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G V+N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL--DSGD-VINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE 203
+A G ++K+W E
Sbjct: 250 AATGPSIKIWDLE 262
Score = 165 (63.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 36/112 (32%), Positives = 59/112 (52%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + ++ GH+H V+D + D SGA D ++ LW+
Sbjct: 32 LSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + IQ
Sbjct: 92 LTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQ 143
Score = 133 (51.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 54/236 (22%), Positives = 99/236 (41%)
Query: 106 NEDSSVVI-SGSQDNT---VMMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
+ D S+++ ++D T + +K SH + S G+ DG + W L
Sbjct: 35 SRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDVVISSDGQFALSGAWDGTLRLWDLTT 94
Query: 162 SSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE-------EDYGQEPIVD 213
+ H+ K V++ S R+ + + +KLW +D G V
Sbjct: 95 GLTTRRFVGHT--KDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQDEGHTEWVS 152
Query: 214 AC-FTRDCQ--CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
F+ + I++C D+ +++++ A +L + GH +G + S D +
Sbjct: 153 CVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCAS 209
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G DG+ W L + + TL G V+N+LC P R + +A G ++K+W E
Sbjct: 210 GGKDGQAMLWDLNEGKHLYTL--DSGD-VINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 43/165 (26%), Positives = 75/165 (45%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKMVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR--- 129
G D +LW++ G+ + + + + F+ + + + + + + +WD++ +
Sbjct: 210 GGKDGQAMLWDLNEGKHLYTL-DSGDVINALCFSPNRYWLCAATGPS-IKIWDLEGKIIV 267
Query: 130 ------------SHHPIQCC--LDSKDSQ-IFCGSSDGKIYKWQL 159
P QC S D Q +F G +D I WQ+
Sbjct: 268 DELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQV 312
Score = 115 (45.5 bits), Expect = 0.00043, P = 0.00043
Identities = 44/170 (25%), Positives = 73/170 (42%)
Query: 50 TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTCV 103
T GH+ V AT I S + DKS+I+W++T G P R + H+ V+ V
Sbjct: 10 TLKGHSGWVTQIATTPKYPDMILSASRDKSIIMWKLTRDETNYGIPQRSLKGHSHFVSDV 69
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKS---------RSHHPIQCCLDSKDSQIFCGSSDGKI 154
+ D +SG+ D T+ +WD+ + + + + + QI GS D I
Sbjct: 70 VISSDGQFALSGAWDGTLRLWDLTTGLTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 155 YKWQLVDSSQISTLIHSVGKAV-VNSLCSHPTRKH-IMSACG--NNVKLW 200
W + + + I G V+ + P + I+ +CG VK+W
Sbjct: 130 KLWNTLGVCKYT--IQDEGHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 177
Score = 41 (19.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 38/181 (20%), Positives = 75/181 (41%)
Query: 121 VMMWDVKSRSHHP-IQCCLDSKDSQ----IFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 175
V + ++ H + C S +S + CG D + W L + + I G
Sbjct: 137 VCKYTIQDEGHTEWVSCVRFSPNSSNPIIVSCGW-DKMVKVWNLANCKLKTNHIGHTG-- 193
Query: 176 VVNSLCSHPTRKHIMSACGNN--VKLWTAEED---YGQEP--IVDA-CFTRDCQCILTCS 227
+N++ P + ++ G + LW E Y + +++A CF+ + + L +
Sbjct: 194 YLNTVTVSPDGS-LCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALCFSPN-RYWLCAA 251
Query: 228 TDECLRLFDKATGELLEEYKGHK-SGDFRIEC--CLD---SKDSQ-IFCGSSDGKIYKWQ 280
T ++++D +++E + S + + E C S D Q +F G +D I WQ
Sbjct: 252 TGPSIKIWDLEGKIIVDELRQEVISTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQ 311
Query: 281 L 281
+
Sbjct: 312 V 312
>UNIPROTKB|I3LI24 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9823 "Sus scrofa" [GO:2001244 "positive
regulation of intrinsic apoptotic signaling pathway" evidence=IEA]
[GO:0051898 "negative regulation of protein kinase B signaling
cascade" evidence=IEA] [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0050765 "negative regulation of phagocytosis"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043547 "positive regulation of GTPase activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0042169 "SH2 domain binding" evidence=IEA]
[GO:0032464 "positive regulation of protein homooligomerization"
evidence=IEA] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0030971 "receptor tyrosine kinase binding" evidence=IEA]
[GO:0030496 "midbody" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0030292 "protein tyrosine kinase inhibitor
activity" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008656 "cysteine-type endopeptidase activator
activity involved in apoptotic process" evidence=IEA] [GO:0008200
"ion channel inhibitor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0001891 "phagocytic cup"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0048471 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0043547 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043065 GO:GO:0051726
GO:GO:0001891 GO:GO:0030335 GO:GO:0050765 GO:GO:0001934
GO:GO:0030496 GO:GO:0032436 GO:GO:0008200 GO:GO:2001244
GO:GO:0032464 GO:GO:0030292 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 Ensembl:ENSSSCT00000022602
Uniprot:I3LI24
Length = 317
Score = 205 (77.2 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 61/225 (27%), Positives = 106/225 (47%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 133
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G ++N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDIINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE-----EDYGQEPIVDACFTRDCQCI-LTCSTD 229
+A G ++K+W E ++ QE I + QC L S D
Sbjct: 250 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSAD 294
Score = 169 (64.5 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 45/151 (29%), Positives = 73/151 (48%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+C DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSCRRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD--------VKSRSHHP-I 134
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ V+ SH +
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 151
Query: 135 QCCLDSKDSQ----IFCGSSDGKIYKWQLVD 161
C S +S + CG D + W L +
Sbjct: 152 SCVRFSPNSSNPIIVSCGW-DKLVNVWNLAN 181
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 51/211 (24%), Positives = 92/211 (43%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSSDN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T +++ E + F+ + I++C D+ + ++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVNVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G ++N+LC P R + +A G ++K+W E
Sbjct: 232 GGDIINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 27/76 (35%), Positives = 41/76 (53%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK + +WN N LKT + GH +N T + D S AS
Sbjct: 151 VSCVRFSPNSSNPIIVSCGWDKLVNVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 209
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 210 GGKDGQAMLWDLNEGK 225
>ASPGD|ASPL0000017294 [details] [associations]
symbol:AN3926 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0051568 "histone H3-K4 methylation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001302 EMBL:AACD01000064 KO:K14963 OrthoDB:EOG49CTJ0
RefSeq:XP_661530.1 ProteinModelPortal:Q5B6A4
EnsemblFungi:CADANIAT00004769 GeneID:2873346 KEGG:ani:AN3926.2
HOGENOM:HOG000215221 OMA:VHEDNPP Uniprot:Q5B6A4
Length = 522
Score = 205 (77.2 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 54/196 (27%), Positives = 97/196 (49%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AVRF+ D S + G+D +K+W L+ T+ GH ++ + + D + IASG+
Sbjct: 179 VSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASGSD 238
Query: 76 DKSVILWEVTTGQP-VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR----- 129
DK++ LW V TG+ + H + V + F+ ++++SGS D V +WDV+S
Sbjct: 239 DKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSARVMKS 298
Query: 130 --SHHPIQCCLDSK-DSQIFCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+H +D D + ++DG + W + TL+H V+S+ P
Sbjct: 299 LPAHSDPVSGIDVVWDGTLIASCATDGLVRIWDTSTGQCLRTLVHE-DNPPVSSVKFSPN 357
Query: 186 RKHIMS-ACGNNVKLW 200
K++++ + V+LW
Sbjct: 358 GKYVLAWTLDDCVRLW 373
Score = 146 (56.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 33/130 (25%), Positives = 63/130 (48%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
GH V+ + D+S IASG +D +V +W +TG+ + + H + ++ + ++ D + +
Sbjct: 174 GHLRGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATI 233
Query: 113 ISGSQDNTVMMWDVKSRSHHPIQ----------CCLDSKDSQIFCGSSDGKIYKWQLVDS 162
SGS D T+ +W+V + HP K + + GS D ++ W + +
Sbjct: 234 ASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLVSGSYDEAVFLWDVRSA 293
Query: 163 SQISTL-IHS 171
+ +L HS
Sbjct: 294 RVMKSLPAHS 303
Score = 141 (54.7 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 59/280 (21%), Positives = 115/280 (41%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAA 64
+ T + I + ++ DG+ + DK I+LWN T + GH + V +
Sbjct: 211 IYTFEGHLAGISTISWSPDGATIASGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFS 270
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ + SG+ D++V LW+V + + ++ H+ V+ + D +++ S + D V +W
Sbjct: 271 PKGNMLVSGSYDEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDGLVRIW 330
Query: 125 DVKSRSHHPIQCCLDSKDSQIFCGSSDGK-IYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
D + D+ S +GK + W L D ++ + G+ + + H
Sbjct: 331 DTSTGQCLRTLVHEDNPPVSSVKFSPNGKYVLAWTLDDCVRLWDYVE--GRCL-KTYQGH 387
Query: 184 PTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL 243
+K+ +S A YGQ I T ++ S D + +D T ++L
Sbjct: 388 SNKKYSLSG---------AFGVYGQS-IPGR--TPGYAFAVSGSEDGAILCWDVVTKKVL 435
Query: 244 EEYKGHKSGDFRIECCLDSKDS-QIFCGSSDGKIYKWQLV 282
+ + H ++ C + + CG DG + W+ V
Sbjct: 436 QRIEAHDGVVLGVDTCSTGEGRFMVSCGL-DGTVRVWEEV 474
Score = 44 (20.5 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 212 VDACFTRDCQCILTCSTDECLRLFDKATGE 241
VD C T + + +++C D +R++++ E
Sbjct: 448 VDTCSTGEGRFMVSCGLDGTVRVWEEVGPE 477
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 144 (55.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 51/199 (25%), Positives = 88/199 (44%)
Query: 140 SKDSQIFCGSSDGKI-YKWQ---LVDSSQIS--TLIHSVG-KAVVNSLCSHPTRKHIMSA 192
S D I S +G+I YKW+ + D + S T ++ VG + ++N+ H + +
Sbjct: 315 SPDCHITHWSLNGEILYKWEDVNIYDMALTSDGTKLYIVGFEQLINAEDKHIAIYSVETR 374
Query: 193 -CGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS 251
C + L Q + C ++D + LT L+D ++ +Y GHK
Sbjct: 375 ECIKKISL--------QSKVTSICLSKDSKYALTNLEPHTTFLWDLEENRIVRQYMGHKL 426
Query: 252 GDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKH 310
G+F I C KD + GS D KI W ++TL V VN + +P +
Sbjct: 427 GNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHV--KCVNYVAYNPVDPY 484
Query: 311 IMSACG--NNVKLWTAEED 327
++ G N V++W+ +++
Sbjct: 485 QFASAGDDNTVRIWSNKDN 503
Score = 118 (46.6 bits), Expect = 0.00044, P = 0.00044
Identities = 51/216 (23%), Positives = 96/216 (44%)
Query: 10 DCKQG-AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV---NDATAA- 64
D K G ++ + DG +T D I W+ +L K + +++ +D T
Sbjct: 292 DYKHGFSVSCCCWLPDGLSFITGSPDCHITHWSLNGEILYKWEDVNIYDMALTSDGTKLY 351
Query: 65 -CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
Q+ + A DK + ++ V T + +++ SKVT + ++DS ++ + +T +
Sbjct: 352 IVGFEQLIN-AEDKHIAIYSVETRECIKKISLQ-SKVTSICLSKDSKYALTNLEPHTTFL 409
Query: 124 WDVKS----RSH--HP-----IQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHS 171
WD++ R + H I C KD + GS D KI W ++TL
Sbjct: 410 WDLEENRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGH 469
Query: 172 VGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAEED 205
V K V N + +P + ++ G N V++W+ +++
Sbjct: 470 V-KCV-NYVAYNPVDPYQFASAGDDNTVRIWSNKDN 503
Score = 112 (44.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 33/114 (28%), Positives = 55/114 (48%)
Query: 54 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI 113
H+ EV + + + +AS + DK+ I+++V + V R H V ++++ D ++
Sbjct: 212 HSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLL 271
Query: 114 SGSQDNTVMMWDV----KSRSH-H--PIQCCLDSKDSQIFC-GSSDGKIYKWQL 159
S S D +V++WD K R + H + CC D F GS D I W L
Sbjct: 272 SCSCDKSVILWDAFTGEKLRDYKHGFSVSCCCWLPDGLSFITGSPDCHITHWSL 325
Score = 106 (42.4 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 28/108 (25%), Positives = 50/108 (46%)
Query: 19 VRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 78
+ ++ +G Y + DK +++ + GH V + D + S + DKS
Sbjct: 219 ISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKS 278
Query: 79 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
VILW+ TG+ +R ++ H V+C + D I+GS D + W +
Sbjct: 279 VILWDAFTGEKLRDYK-HGFSVSCCCWLPDGLSFITGSPDCHITHWSL 325
Score = 51 (23.0 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 8/34 (23%), Positives = 21/34 (61%)
Query: 93 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+ +H+ +V + ++ + + S S+D T +++DV
Sbjct: 209 FHDHSDEVWQISYSHNGRYLASASKDKTAIIFDV 242
>SGD|S000004951 [details] [associations]
symbol:LST8 "Protein required for the transport of Gap1p to
the cell surface" species:4932 "Saccharomyces cerevisiae"
[GO:0030950 "establishment or maintenance of actin cytoskeleton
polarity" evidence=IMP] [GO:0030295 "protein kinase activator
activity" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0031234 "extrinsic to
internal side of plasma membrane" evidence=IDA] [GO:0001558
"regulation of cell growth" evidence=IPI] [GO:0005774 "vacuolar
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IMP] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0000139 "Golgi membrane" evidence=IDA] [GO:0031505 "fungal-type
cell wall organization" evidence=IMP] [GO:0031929 "TOR signaling
cascade" evidence=IC;IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0031930
"mitochondria-nucleus signaling pathway" evidence=IMP] [GO:0031932
"TORC2 complex" evidence=IPI] [GO:0031931 "TORC1 complex"
evidence=IPI] [GO:0006810 "transport" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004951 GO:GO:0005774 GO:GO:0000139 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0001558
GO:GO:0031929 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:BK006947 GO:GO:0030295 GO:GO:0010008
GO:GO:0031930 GO:GO:0031505 KO:K07034 GO:GO:0031931 GO:GO:0030950
RefSeq:NP_014399.3 GeneID:855736 KEGG:sce:YNR002C GO:GO:0031932
GO:GO:0031234 EMBL:X77114 RefSeq:NP_014392.3 GeneID:855726
KEGG:sce:YNL006W KO:K08266 GeneTree:ENSGT00390000014795
HOGENOM:HOG000208395 OMA:NNKGNCY EMBL:Z71282 PIR:S45461
ProteinModelPortal:P41318 SMR:P41318 DIP:DIP-5318N IntAct:P41318
MINT:MINT-562844 STRING:P41318 PaxDb:P41318 PeptideAtlas:P41318
EnsemblFungi:YNL006W CYGD:YNL006w OrthoDB:EOG4GF6PT NextBio:980099
Genevestigator:P41318 GermOnline:YNL006W Uniprot:P41318
Length = 303
Score = 134 (52.2 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 37/141 (26%), Positives = 66/141 (46%)
Query: 29 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV-TTG 87
++ G D I+ W + +T +VN D +A+ A ++V L+++ TT
Sbjct: 6 VSAGYDHTIRFWEALTGVCSRTIQHSDSQVNRLEITNDKKLLAT-AGHQNVRLYDIRTTN 64
Query: 88 -QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS------HH-PI-QCCL 138
PV + H VT V F +D+ +++ S+D T+ +WDV+S S H+ P+ + +
Sbjct: 65 PNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGTIKVWDVRSPSIPRNYKHNAPVNEVVI 124
Query: 139 DSKDSQIFCGSSDGKIYKWQL 159
++ DG I W L
Sbjct: 125 HPNQGELISCDRDGNIRIWDL 145
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIASGA 74
I + + D + TC +D ++W+ + L+T GH V D + DS+ + + +
Sbjct: 210 ITRILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTAS 269
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 107
SD V LW+++T + VR++ H CV N+
Sbjct: 270 SDHYVRLWDLSTREIVRQYGGHHKGAVCVALND 302
Score = 113 (44.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 31/127 (24%), Positives = 61/127 (48%)
Query: 140 SKDSQIFCGSSDGKIYKWQL---VDSSQIS--TLIHSVGKAVVNSLCSHPTRKHIMSACG 194
S S + ++ G Y W++ D+S + T + + L S KH+ +
Sbjct: 169 SDGSMLAAANTKGNCYVWEMPNHTDASHLKPVTKFRAHSTYITRILLSSDV-KHLATCSA 227
Query: 195 NNV-KLWTAEEDYGQEPIVDA-------C-FTRDCQCILTCSTDECLRLFDKATGELLEE 245
++ ++W+ ++D+ E +D C F+ D ++T S+D +RL+D +T E++ +
Sbjct: 228 DHTARVWSIDDDFKLETTLDGHQRWVWDCAFSADSAYLVTASSDHYVRLWDLSTREIVRQ 287
Query: 246 YKGHKSG 252
Y GH G
Sbjct: 288 YGGHHKG 294
Score = 52 (23.4 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 16/64 (25%), Positives = 27/64 (42%)
Query: 219 DCQCILTCSTDECLRLFDKATGELLEE-YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIY 277
D + + TCS D R++ LE GH+ + +C + + + SSD +
Sbjct: 218 DVKHLATCSADHTARVWSIDDDFKLETTLDGHQRWVW--DCAFSADSAYLVTASSDHYVR 275
Query: 278 KWQL 281
W L
Sbjct: 276 LWDL 279
>FB|FBgn0031229 [details] [associations]
symbol:CG3436 species:7227 "Drosophila melanogaster"
[GO:0005682 "U5 snRNP" evidence=ISS] [GO:0000398 "mRNA splicing,
via spliceosome" evidence=IC;ISS] [GO:0030532 "small nuclear
ribonucleoprotein complex" evidence=ISS] [GO:0007067 "mitosis"
evidence=IMP] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007067 EMBL:AE014134 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005682 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 HSSP:P16649 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 UniGene:Dm.1591 GeneID:33180
KEGG:dme:Dmel_CG3436 FlyBase:FBgn0031229 GenomeRNAi:33180
NextBio:782301 EMBL:AY070530 RefSeq:NP_608501.1 SMR:Q9VPL0
STRING:Q9VPL0 EnsemblMetazoa:FBtr0078119 UCSC:CG3436-RA
InParanoid:Q9VPL0 Uniprot:Q9VPL0
Length = 347
Score = 202 (76.2 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 52/207 (25%), Positives = 98/207 (47%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAA 64
+ ++ +G I F+ +G L+ G D++I +W Y + + GH+ V +A
Sbjct: 48 IMQLEGHEGEIFTAEFHPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFT 107
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGSQDNTVMM 123
D S I + ++DK++ W++ TGQ RR++ H + V V+ + ++ SGS D T+ +
Sbjct: 108 PDGSHIFTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKI 167
Query: 124 WDVKSR--SH---HPIQC---CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 175
WD + + +H P Q C Q+ G D ++ W D + + L H G +
Sbjct: 168 WDARKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIW---DIRKQAVLHHLRGHS 224
Query: 176 -VVNSLCSHPTRKHIMS-ACGNNVKLW 200
+ + P I++ A N +++W
Sbjct: 225 DTITGMSLSPEGDFILTNAMDNTLRVW 251
Score = 140 (54.3 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 31/119 (26%), Positives = 58/119 (48%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWN--PYR--NLLLKTYGGHAHEVNDATAAC----DS 67
I + + +G + LT D +++W+ PY +K + GH H C S
Sbjct: 227 ITGMSLSPEGDFILTNAMDNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGS 286
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+I SG++D+ V +W+V T + + + H V V F+ +++SGS D T+ + ++
Sbjct: 287 DKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLYLGEI 345
Score = 132 (51.5 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 44/151 (29%), Positives = 68/151 (45%)
Query: 183 HPTRKHIMSA-CGNNVKLWTAEEDY-------GQE-PIVDACFTRDCQCILTCSTDECLR 233
HP + ++S+ + +W ED G +++A FT D I TCSTD+ L
Sbjct: 64 HPEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLA 123
Query: 234 LFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIH 292
+D ATG+ +KGH G+F + Q+ C SD + K W TL
Sbjct: 124 FWDIATGQRQRRFKGH--GNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL-E 180
Query: 293 SVGKAVVNSLCSHPTRKHIMSA-CGNNVKLW 322
S + V ++C T + ++S N VK+W
Sbjct: 181 SPFQ--VTAVCFGDTGEQVISGGIDNEVKIW 209
Score = 128 (50.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 16 IRAVRFNVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVN-DATAAC--DSS-QI 70
+ +V+ + G L GSD + IK+W+ K + H E TA C D+ Q+
Sbjct: 143 VNSVQGSRRGQQLLCSGSDDRTIKIWDAR-----KKHAAHTLESPFQVTAVCFGDTGEQV 197
Query: 71 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
SG D V +W++ + R H+ +T + + + +++ + DNT+ +WDV R
Sbjct: 198 ISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAMDNTLRVWDV--RP 255
Query: 131 HHPIQCCL 138
+ P + C+
Sbjct: 256 YAPGERCV 263
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 38/157 (24%), Positives = 70/157 (44%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV F G ++ G D ++K+W+ + +L GH+ + + + + I + A
Sbjct: 185 VTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLHHLRGHSDTITGMSLSPEGDFILTNAM 244
Query: 76 DKSVILWEVTTGQPVRRW------REHASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D ++ +W+V P R +H + ++ ++ S + SGS D V +WDV
Sbjct: 245 DNTLRVWDVRPYAPGERCVKVFQGHQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVN 304
Query: 128 SR-------SHHPIQCCLD--SKDSQIFCGSSDGKIY 155
+R H+ +D K+ I GSSD +Y
Sbjct: 305 TRRILYKLPGHNGSVNAVDFSPKEPLILSGSSDKTLY 341
Score = 46 (21.3 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 19/73 (26%), Positives = 32/73 (43%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSA 192
++C +I GS+D +Y W V++ +I L G VN++ P I+S
Sbjct: 278 LRCAWSPGSDKITSGSADRHVYIWD-VNTRRI--LYKLPGHNGSVNAVDFSPKEPLILSG 334
Query: 193 CGNNVKLWTAEED 205
+ L+ E D
Sbjct: 335 SSDKT-LYLGEID 346
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 206 (77.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 58/243 (23%), Positives = 100/243 (41%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +RA+ D + + D+ IK+W+ L T GH V + + S
Sbjct: 202 GWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLAVSPRHPYLFSC 261
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-H 132
A DK V W++ T + +R + H S V + + V+++G +D +WD+++RS+ H
Sbjct: 262 AEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIH 321
Query: 133 PIQ---------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
+ C ++ D Q+ GS D + W L + L H K V +L +H
Sbjct: 322 VLSGHTGTVSELVCQEA-DPQVITGSLDSTVRMWDLAAGKTMGVLTHH--KKGVRALATH 378
Query: 184 PTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDK 237
PT S ++K W E G I++ D + + + + +D
Sbjct: 379 PTEFTFASGSAGSIKQWKCPEGAFMQNFEGHNSIINTLSVNDQNVFFSGADNGSMSFWDW 438
Query: 238 ATG 240
TG
Sbjct: 439 KTG 441
Score = 127 (49.8 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 54/257 (21%), Positives = 100/257 (38%)
Query: 40 WN-PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHAS 98
W+ P++ L++ GH V D+ ASGA D+++ +W++ +G+ H S
Sbjct: 187 WHRPWK--LMRVISGHLGWVRALAVEPDNKWFASGAGDRTIKIWDLASGRLRLTLTGHIS 244
Query: 99 KVTCVKFNEDSSVVISGSQDNTVMMWDVKS----RSHHP-----IQCCLDSKDSQIFCGS 149
V + + + S ++D V WD+++ R +H L + G
Sbjct: 245 TVRGLAVSPRHPYLFSCAEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGG 304
Query: 150 SDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW--TAEEDYG 207
DG W + S I L G V +C + I + + V++W A + G
Sbjct: 305 RDGVARVWDMRTRSNIHVLSGHTG-TVSELVCQEADPQVITGSLDSTVRMWDLAAGKTMG 363
Query: 208 ----QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSK 263
+ V A T + + ++ + G ++ ++GH S I L
Sbjct: 364 VLTHHKKGVRALATHPTEFTFASGSAGSIKQWKCPEGAFMQNFEGHNS----IINTLSVN 419
Query: 264 DSQIF-CGSSDGKIYKW 279
D +F G+ +G + W
Sbjct: 420 DQNVFFSGADNGSMSFW 436
Score = 122 (48.0 bits), Expect = 0.00016, P = 0.00016
Identities = 45/194 (23%), Positives = 69/194 (35%)
Query: 142 DSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKL 199
D++ F G+ D I W L TL + + V L P ++ S + VK
Sbjct: 212 DNKWFASGAGDRTIKIWDLASGRLRLTLTGHI--STVRGLAVSPRHPYLFSCAEDKMVKC 269
Query: 200 WTAEED------YGQ-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSG 252
W E + +G + ++T D R++D T + GH
Sbjct: 270 WDLETNKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGVARVWDMRTRSNIHVLSGHTGT 329
Query: 253 DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 312
+ C D Q+ GS D + W L + L H K V +L +HPT
Sbjct: 330 VSELVC--QEADPQVITGSLDSTVRMWDLAAGKTMGVLTHH--KKGVRALATHPTEFTFA 385
Query: 313 SACGNNVKLWTAEE 326
S ++K W E
Sbjct: 386 SGSAGSIKQWKCPE 399
>DICTYBASE|DDB_G0271788 [details] [associations]
symbol:wdr57 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0005681 "spliceosomal complex" evidence=IEA;ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0271788
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR GO:GO:0005681 EMBL:AAFI02000006
GO:GO:0000398 KO:K12857 OMA:HAGSVNE HSSP:P61964 RefSeq:XP_645454.1
ProteinModelPortal:Q55AR8 STRING:Q55AR8 EnsemblProtists:DDB0233518
GeneID:8618082 KEGG:ddi:DDB_G0271788 Uniprot:Q55AR8
Length = 355
Score = 202 (76.2 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 54/210 (25%), Positives = 99/210 (47%)
Query: 1 MEYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVN 59
+E+ +Q I K G I + +FN G+ + GSDK+I LWN Y + GH +
Sbjct: 51 LEHPIMQLIGHK-GEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTIL 109
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQD 118
+ + DS++I + +DKS+ +W+ G+ ++R REH+ V +C +V SGS D
Sbjct: 110 ELHWSTDSNEIYTACTDKSIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDD 169
Query: 119 NTVMMWDVKSR--SH-----HPI-QCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 170
+ ++D +S+ +H +P+ C Q+ G D I W + + +
Sbjct: 170 RSARIFDTRSKGSTHLFQHKYPVTSVCFSDASDQLITGGIDNVIRVWDIRNQEDPLYTLA 229
Query: 171 SVGKAVVNSLCSHPTRKHIMSACGNNVKLW 200
S + ++ S + ++ N+ K+W
Sbjct: 230 SHQDTITSTSVSKDGAYLLSNSMDNSCKIW 259
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 36/128 (28%), Positives = 63/128 (49%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYR--NLLLKTYGGHAH--EVN-- 59
T+ Q I + + DG+Y L+ D K+W+ PY N +KT+ G + E N
Sbjct: 227 TLASHQDTITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIKTFNGAQNNFEKNLI 286
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
++ + D +I G+SD+ V +W+ T Q H+ V V F+ + ++ S S D
Sbjct: 287 KSSWSIDGRRIGCGSSDRQVYIWDTNTKQLQYCLPGHSGTVNEVTFHPNEPIIASCSSDK 346
Query: 120 TVMMWDVK 127
T+ + ++K
Sbjct: 347 TIYLGEIK 354
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 204 (76.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 56/199 (28%), Positives = 82/199 (41%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F+ DG + T DK IK+W+ YR L + H H V A + D I S +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHH 132
DK++ +W+ T Q V + + V FN + + S D TV +WDV K H+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 133 PIQC----CLD--SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
+ C+ D+ + SSDG + L++ I TL G S S
Sbjct: 225 QVHSGGVNCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF-SKGGE 283
Query: 187 KHIMSACGNNVKLWTAEED 205
V LW D
Sbjct: 284 LFASGGADTQVLLWRTNFD 302
Score = 187 (70.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 67/286 (23%), Positives = 120/286 (41%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ AI ++ + +G T D + LWN + Y GH V + + +AS
Sbjct: 18 KAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLAS 77
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSR-- 129
+ D++V LW ++ H + V V F+ D + + S+D ++ +W + + R
Sbjct: 78 ASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFL 137
Query: 130 ----SH-HPIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSH 183
H H ++C S D ++ S+ K K W + ++ SVG A N + +
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA--NFVDFN 195
Query: 184 PTRKHIMSACGNN-VKLWTAE-----EDYGQEPIVDAC--FTRDCQCILTCSTDECLRLF 235
P+ I SA + VK+W + Y C F ++T S+D L++
Sbjct: 196 PSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASSDGTLKIL 255
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 280
D G L+ +GH F + SK ++F G +D ++ W+
Sbjct: 256 DLLEGRLIYTLQGHTGPVFTVSF---SKGGELFASGGADTQVLLWR 298
Score = 158 (60.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 66/301 (21%), Positives = 117/301 (38%)
Query: 46 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 105
+L + + GH + + + Q+A+ + D ++LW R+ H VT V+F
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 106 NEDSSVVISGSQDNTVMMW--DVKSR-----SHH-PIQCCLDSKDSQIFCGSSDGKIYK- 156
+ +++ S S+D TV +W D + + +H P++ S D Q +S+ K K
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 157 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEEDYGQEPIVDA 214
W + + +L V P + I+S C + +K+W D+
Sbjct: 129 WSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVS-CSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 215 C-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDSKDSQ 266
F CI + +D+ ++++D +LL+ Y+ H G + C D+
Sbjct: 186 VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG---VNCISFHPSDNY 242
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 326
+ SSDG + L++ I TL G S S V LW
Sbjct: 243 LVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF-SKGGELFASGGADTQVLLWRTNF 301
Query: 327 D 327
D
Sbjct: 302 D 302
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV G V FN G+ + GSD+ +K+W+ N LL+ Y H+ VN +
Sbjct: 178 CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFH 237
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ + + +SD ++ + ++ G+ + + H V V F++ + SG D V++W
Sbjct: 238 PSDNYLVTASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>ZFIN|ZDB-GENE-990415-89 [details] [associations]
symbol:gnb2l1 "guanine nucleotide binding protein (G
protein), beta polypeptide 2-like 1" species:7955 "Danio rerio"
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IGI;IMP] [GO:0051302 "regulation of cell
division" evidence=IMP] [GO:2000114 "regulation of establishment of
cell polarity" evidence=IMP] [GO:0032880 "regulation of protein
localization" evidence=IMP] [GO:0030178 "negative regulation of Wnt
receptor signaling pathway" evidence=IMP] [GO:2000543 "positive
regulation of gastrulation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-990415-89 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032880 GO:GO:0001525 GO:GO:0030178 GO:GO:0060027
GO:GO:2000114 GO:GO:0051302 GO:GO:2000543 HOGENOM:HOG000091643
KO:K14753 CTD:10399 GeneTree:ENSGT00700000104461 HOVERGEN:HBG000277
OrthoDB:EOG4933J5 EMBL:AF025330 EMBL:AY423038 EMBL:BC049459
IPI:IPI00507097 RefSeq:NP_571519.1 UniGene:Dr.75572
ProteinModelPortal:O42248 SMR:O42248 STRING:O42248 PRIDE:O42248
Ensembl:ENSDART00000061001 GeneID:30722 KEGG:dre:30722
InParanoid:O42248 NextBio:20807071 ArrayExpress:O42248 Bgee:O42248
Uniprot:O42248
Length = 317
Score = 199 (75.1 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 53/193 (27%), Positives = 93/193 (48%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 74 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWN 133
Query: 84 VTTGQPVRRWRE--HASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G ++ H V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 134 -TLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G +N+LC P R +
Sbjct: 193 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD---GGDTINALCFSPNRYWLC 249
Query: 191 SACGNNVKLWTAE 203
+A G ++K+W E
Sbjct: 250 AATGPSIKIWDLE 262
Score = 163 (62.4 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 38/124 (30%), Positives = 62/124 (50%)
Query: 29 LTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
L+ DK I +W R+ + + GH+H V+D + D SG+ D ++ LW+
Sbjct: 32 LSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 91
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCLDSKDS 143
+TTG RR+ H V V F+ D+ ++SGS+D T+ +W+ + IQ DS
Sbjct: 92 LTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLGVCKYTIQD--DSHTE 149
Query: 144 QIFC 147
+ C
Sbjct: 150 WVSC 153
Score = 140 (54.3 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 52/211 (24%), Positives = 92/211 (43%)
Query: 129 RSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
R H H + + S D Q GS DG + W L + + H+ K V++ S
Sbjct: 60 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSADN 117
Query: 186 RKHIMSACGNNVKLW--------TAEEDYGQEPIVDACFTRDCQ--CILTCSTDECLRLF 235
R+ + + +KLW T ++D E + F+ + I++C D+ ++++
Sbjct: 118 RQIVSGSRDKTIKLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 177
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSV 294
+ A +L + GH +G + S D + G DG+ W L + + TL
Sbjct: 178 NLANCKLKTNHIGH-TG--YLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--- 231
Query: 295 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G +N+LC P R + +A G ++K+W E
Sbjct: 232 GGDTINALCFSPNRYWLCAATGPSIKIWDLE 262
Score = 126 (49.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 47/178 (26%), Positives = 79/178 (44%)
Query: 5 CVQTI--DCKQGAIRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVN 59
C TI D + VRF+ + S ++CG DK +K+WN N LKT + GH +N
Sbjct: 138 CKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVWN-LANCKLKTNHIGHTGYLN 196
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
T + D S ASG D +LW++ G+ + + + + F+ + + + + +
Sbjct: 197 TVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL-DGGDTINALCFSPNRYWLCAATGPS 255
Query: 120 TVMMWDVKSR---------------SHHPIQCC--LDSKDSQ-IFCGSSDGKIYKWQL 159
+ +WD++ + P QC S D Q +F G +D I WQ+
Sbjct: 256 -IKIWDLEGKIIVDELRQDIITTNSKAEPPQCTSLAWSADGQTLFAGYTDNLIRVWQV 312
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 45/168 (26%), Positives = 72/168 (42%)
Query: 50 TYGGHAHEVND-ATAACDSSQIASGASDKSVILWEVTT-----GQPVRRWREHASKVTCV 103
T GH+ V AT I S + DK++I+W++T G P R R H+ V+ V
Sbjct: 10 TLKGHSGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDV 69
Query: 104 KFNEDSSVVISGSQDNTVMMWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGKI 154
+ D +SGS D T+ +WD+ + + H + + + QI GS D I
Sbjct: 70 VISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSADNRQIVSGSRDKTI 129
Query: 155 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLW 200
W + + + S + V S + I+ +CG VK+W
Sbjct: 130 KLWNTLGVCKYTIQDDSHTEWVSCVRFSPNSSNPIIVSCGWDKMVKVW 177
>CGD|CAL0005939 [details] [associations]
symbol:TUP1 species:5476 "Candida albicans" [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=IGI;ISS;IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0016337 "cell-cell adhesion" evidence=IMP]
[GO:0045827 "negative regulation of isoprenoid metabolic process"
evidence=IMP] [GO:0009372 "quorum sensing" evidence=IMP]
[GO:0044409 "entry into host" evidence=IMP] [GO:0051834 "evasion or
tolerance of defenses of other organism involved in symbiotic
interaction" evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035690 "cellular
response to drug" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:2001020 "regulation of response to DNA damage
stimulus" evidence=IEA] [GO:0000433 "negative regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0043156 "chromatin remodeling in
response to cation stress" evidence=IEA] [GO:0061418 "regulation of
transcription from RNA polymerase II promoter in response to
hypoxia" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001198 "negative
regulation of mating-type specific transcription from RNA
polymerase II promoter" evidence=IEA] [GO:1900429 "negative
regulation of filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0044182 "filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:0097308
"cellular response to farnesol" evidence=IMP] [GO:0036171
"filamentous growth of a population of unicellular organisms in
response to chemical stimulus" evidence=IMP] [GO:0044114
"development of symbiont in host" evidence=IMP] [GO:0009267
"cellular response to starvation" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0036180 "filamentous
growth of a population of unicellular organisms in response to
biotic stimulus" evidence=IMP] [GO:0036166 "phenotypic switching"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036033 "mediator complex binding" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0001191
"RNA polymerase II transcription factor binding transcription
factor activity involved in negative regulation of transcription"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 205 (77.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 75/269 (27%), Positives = 127/269 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
IR+V F+ DG T DK I++W+ ++K GH ++ D ++ SG+
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D+SV +W++ T Q VT V + D ++ +GS D TV +WD S + ++
Sbjct: 318 DRSVRIWDLRTSQ-CSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWD--STTGFLVE 374
Query: 136 CCLDSKDSQIFCGSSDGKIYKWQLVDSS-QISTLIHSVGKAVVNSLCSHPTRKHIMSACG 194
LDS + G D +Y ++ QI++ S+ + V L + S C
Sbjct: 375 R-LDSGNEN-GNGHEDS-VYSVAFSNNGEQIAS--GSLDRTV--KLWHLEGKSDKKSTC- 426
Query: 195 NNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
V + +D+ ++ C T D + IL+ S D + +D+A+G L +GH++
Sbjct: 427 -EVT-YIGHKDF----VLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVI 480
Query: 255 RIECCLDSKDSQ-IFC-GSSDGK--IYKW 279
+ L+SK ++ IF GS D K I+KW
Sbjct: 481 SVAVSLNSKGTEGIFATGSGDCKARIWKW 509
>UNIPROTKB|P0CY34 [details] [associations]
symbol:TUP1 "Transcriptional repressor TUP1" species:237561
"Candida albicans SC5314" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009372 "quorum sensing" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016337 "cell-cell adhesion"
evidence=IMP] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0035690 "cellular response to drug" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
growth of a population of unicellular organisms in response to
starvation" evidence=IMP] [GO:0036171 "filamentous growth of a
population of unicellular organisms in response to chemical
stimulus" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0044114 "development of symbiont in host"
evidence=IMP] [GO:0044182 "filamentous growth of a population of
unicellular organisms" evidence=IMP] [GO:0044409 "entry into host"
evidence=IMP] [GO:0045827 "negative regulation of isoprenoid
metabolic process" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IGI;IMP] [GO:0051834
"evasion or tolerance of defenses of other organism involved in
symbiotic interaction" evidence=IMP] [GO:0071216 "cellular response
to biotic stimulus" evidence=IMP] [GO:0071280 "cellular response to
copper ion" evidence=IMP] [GO:0097308 "cellular response to
farnesol" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005939 InterPro:IPR001632 GO:GO:0071216
GO:GO:0036180 GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122 GO:GO:0071280
GO:GO:0035690 GO:GO:0009267 GO:GO:0016337 GO:GO:0009372
EMBL:AACQ01000036 EMBL:AACQ01000035 GO:GO:0036170 GO:GO:0044409
PRINTS:PR00319 GO:GO:0036171 GO:GO:1900429 GO:GO:0044114
GO:GO:0036166 GO:GO:0051834 GO:GO:0097308 KO:K06666
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558 RefSeq:XP_718964.1
RefSeq:XP_719068.1 COMPLUYEAST-2DPAGE:P56093 GeneID:3639369
GeneID:3639474 KEGG:cal:CaO19.13528 KEGG:cal:CaO19.6109
GO:GO:0045827 Uniprot:P0CY34
Length = 512
Score = 205 (77.2 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 75/269 (27%), Positives = 127/269 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
IR+V F+ DG T DK I++W+ ++K GH ++ D ++ SG+
Sbjct: 258 IRSVCFSPDGKLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSG 317
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D+SV +W++ T Q VT V + D ++ +GS D TV +WD S + ++
Sbjct: 318 DRSVRIWDLRTSQ-CSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWD--STTGFLVE 374
Query: 136 CCLDSKDSQIFCGSSDGKIYKWQLVDSS-QISTLIHSVGKAVVNSLCSHPTRKHIMSACG 194
LDS + G D +Y ++ QI++ S+ + V L + S C
Sbjct: 375 R-LDSGNEN-GNGHEDS-VYSVAFSNNGEQIAS--GSLDRTV--KLWHLEGKSDKKSTC- 426
Query: 195 NNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
V + +D+ ++ C T D + IL+ S D + +D+A+G L +GH++
Sbjct: 427 -EVT-YIGHKDF----VLSVCCTPDNEYILSGSKDRGVIFWDQASGNPLLMLQGHRNSVI 480
Query: 255 RIECCLDSKDSQ-IFC-GSSDGK--IYKW 279
+ L+SK ++ IF GS D K I+KW
Sbjct: 481 SVAVSLNSKGTEGIFATGSGDCKARIWKW 509
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 201 (75.8 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +GS + G D+ I LWN Y + T GH+ V + D S +
Sbjct: 66 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 185
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 245
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 246 EGS--YLLSNAMDNTVRVW 262
Score = 166 (63.5 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 127 KS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQL 159
+ R H L S+ S + + D + W +
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 30/121 (24%), Positives = 64/121 (52%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + +GSY L+ D +++W+ P+ + +K + G+ H C D
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+IA+G++D+ V +W+ T+ + + + HA + V F+ D ++IS S D + M ++
Sbjct: 297 GSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
Query: 127 K 127
+
Sbjct: 357 Q 357
Score = 143 (55.4 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV--RPFAPKERCV 274
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 255
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D +V +W+V P R + H + ++ ++ D S + +GS D V +WD
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 315
Query: 128 SR 129
SR
Sbjct: 316 SR 317
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ I T ++ V ++ + T I+S N++K+W ++
Sbjct: 184 KAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 169
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 327
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 170 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Score = 64 (27.6 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 193
++C S+I GS+D +Y W + L G +N + HP I+SA
Sbjct: 289 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS--INEVAFHPDEPIIISAS 346
Query: 194 GNNVKLWTAE 203
+ +L+ E
Sbjct: 347 SDK-RLYMGE 355
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 201 (75.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +GS + G D+ I LWN Y + T GH+ V + D S +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 187 AVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 247 EGS--YLLSNAMDNTVRVW 263
Score = 167 (63.8 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 42/162 (25%), Positives = 74/162 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ V+ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 127 KS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQL 159
+ R H L S+ S + + D + W +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 29/121 (23%), Positives = 64/121 (52%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + +GSY L+ D +++W+ P+ + +K + G+ H C D
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+IA+G++D+ V +W+ T+ + + + HA + V F+ D +++S S D + M ++
Sbjct: 298 GSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Query: 127 K 127
+
Sbjct: 358 Q 358
Score = 142 (55.0 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV--RPFAPKERCV 275
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D +V +W+V P R + H + ++ ++ D S + +GS D V +WD
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 316
Query: 128 SR 129
SR
Sbjct: 317 SR 318
Score = 131 (51.2 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 42/165 (25%), Positives = 73/165 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ + T ++ V ++ + T I+S N++K+W ++
Sbjct: 185 KAAVQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 113 (44.8 bits), Expect = 0.00090, P = 0.00089
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 327
GS DG + W + + + T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAVQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 66 (28.3 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 193
++C S+I GS+D +Y W + L G +N + HP I+SA
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGS--INEVAFHPDEPIILSAS 347
Query: 194 GNNVKLWTAE 203
+ +L+ E
Sbjct: 348 SDK-RLYMGE 356
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 201 (75.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +GS + G D+ I LWN Y + T GH+ V + D S +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 247 EGS--YLLSNAMDNTVRVW 263
Score = 166 (63.5 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 127 KS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQL 159
+ R H L S+ S + + D + W +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 143 (55.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV--RPFAPKERCV 275
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 29/121 (23%), Positives = 64/121 (52%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + +GSY L+ D +++W+ P+ + +K + G+ H C D
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+IA+G++D+ V +W+ T+ + + + HA + V F+ D +++S S D + M ++
Sbjct: 298 GSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Query: 127 K 127
+
Sbjct: 358 Q 358
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D +V +W+V P R + H + ++ ++ D S + +GS D V +WD
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 316
Query: 128 SR 129
SR
Sbjct: 317 SR 318
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ I T ++ V ++ + T I+S N++K+W ++
Sbjct: 185 KAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 327
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 65 (27.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 193
++C S+I GS+D +Y W + L G +N + HP I+SA
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS--INEVAFHPDEPIILSAS 347
Query: 194 GNNVKLWTAE 203
+ +L+ E
Sbjct: 348 SDK-RLYMGE 356
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 201 (75.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +GS + G D+ I LWN Y + T GH+ V + D S +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 247 EGS--YLLSNAMDNTVRVW 263
Score = 166 (63.5 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 127 KS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQL 159
+ R H L S+ S + + D + W +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 143 (55.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV--RPFAPKERCV 275
Score = 142 (55.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 29/121 (23%), Positives = 64/121 (52%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + +GSY L+ D +++W+ P+ + +K + G+ H C D
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 297
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+IA+G++D+ V +W+ T+ + + + HA + V F+ D +++S S D + M ++
Sbjct: 298 GSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Query: 127 K 127
+
Sbjct: 358 Q 358
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D +V +W+V P R + H + ++ ++ D S + +GS D V +WD
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 316
Query: 128 SR 129
SR
Sbjct: 317 SR 318
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ I T ++ V ++ + T I+S N++K+W ++
Sbjct: 185 KAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 327
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 65 (27.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 193
++C S+I GS+D +Y W + L G +N + HP I+SA
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS--INEVAFHPDEPIILSAS 347
Query: 194 GNNVKLWTAE 203
+ +L+ E
Sbjct: 348 SDK-RLYMGE 356
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 201 (75.8 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +GS + G D+ I LWN Y + T GH+ V + D S +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 247 EGS--YLLSNAMDNTVRVW 263
Score = 166 (63.5 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 127 KS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQL 159
+ R H L S+ S + + D + W +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 143 (55.4 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV--RPFAPKERCV 275
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 28/121 (23%), Positives = 64/121 (52%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + +GSY L+ D +++W+ P+ + ++ + G+ H C D
Sbjct: 238 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPD 297
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+IA+G++D+ V +W+ T+ + + + HA + V F+ D +++S S D + M ++
Sbjct: 298 GSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
Query: 127 K 127
+
Sbjct: 358 Q 358
Score = 135 (52.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 76 DKSVILWEVTTGQPVRRW------REHASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D +V +W+V P R H + ++ ++ D S + +GS D V +WD
Sbjct: 257 DNTVRVWDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 316
Query: 128 SR 129
SR
Sbjct: 317 SR 318
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ I T ++ V ++ + T I+S N++K+W ++
Sbjct: 185 KAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 327
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 65 (27.9 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 193
++C S+I GS+D +Y W + L G +N + HP I+SA
Sbjct: 290 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS--INEVAFHPDEPIILSAS 347
Query: 194 GNNVKLWTAE 203
+ +L+ E
Sbjct: 348 SDK-RLYMGE 356
>ASPGD|ASPL0000014385 [details] [associations]
symbol:cpcB species:162425 "Emericella nidulans"
[GO:0034198 "cellular response to amino acid starvation"
evidence=IMP] [GO:0001965 "G-protein alpha-subunit binding"
evidence=IGI;ISS] [GO:0070798 "positive regulation of
cleistothecium development" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0035690 "cellular response to
drug" evidence=IEP] [GO:0097308 "cellular response to farnesol"
evidence=IEP] [GO:0043022 "ribosome binding" evidence=IEA]
[GO:0005080 "protein kinase C binding" evidence=IEA] [GO:0070791
"cleistothecium development" evidence=IMP] [GO:0032995 "regulation
of fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001302
EMBL:AACD01000067 HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
RefSeq:XP_661767.1 ProteinModelPortal:G5EB28 SMR:G5EB28
EnsemblFungi:CADANIAT00004509 GeneID:2873584 KEGG:ani:AN4163.2
Uniprot:G5EB28
Length = 316
Score = 178 (67.7 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 57/218 (26%), Positives = 102/218 (46%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYG-------GHAHEVN 59
T++ G + ++ +++ L GS DK + +WN R+ + YG GH+H V+
Sbjct: 10 TLEGHNGWVTSLATSLENPNMLLSGSRDKTLIIWNLTRDE--QAYGYPKRSLEGHSHIVS 67
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
D + D + S + DKS+ LWE+++GQ R + H + V V F+ D+ ++SGS+D
Sbjct: 68 DCVISSDGAYALSASWDKSLRLWELSSGQTTRTFVGHTNDVLSVSFSADNRQIVSGSRDR 127
Query: 120 TVMMWD--------VKSRSHHP-IQCCLDSKDSQ--IFCGSSDGKIYK-WQLVDSSQIST 167
T+ +W+ + + H + C S + Q + + K+ K W+L S ++ T
Sbjct: 128 TIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSAGWDKLVKVWELA-SCRLQT 186
Query: 168 LIHSVGKAVVNSLCSHPTRKHIMSACGNNVK-LWTAEE 204
H +N++ P S + V LW E
Sbjct: 187 -DHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNE 223
Score = 118 (46.6 bits), Expect = 0.00020, P = 0.00020
Identities = 39/163 (23%), Positives = 66/163 (40%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLK-TYGGHAHEVNDATAACDSSQ--IAS 72
+ +V F+ D ++ D+ IKLWN + T GH V+ + + I S
Sbjct: 108 VLSVSFSADNRQIVSGSRDRTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVS 167
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH- 131
DK V +WE+ + + H + V + D S+ SG +D M+WD+ H
Sbjct: 168 AGWDKLVKVWELASCRLQTDHIGHTGYINTVTISPDGSLCASGGKDGVTMLWDLNESKHL 227
Query: 132 ---HP---IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 168
H I + S + C ++ I + L S++ L
Sbjct: 228 YSLHAGDEIHALVFSPNRYWLCAATSSSITIFDLEKKSKVDEL 270
Score = 59 (25.8 bits), Expect = 6.5e-14, Sum P(2) = 6.5e-14
Identities = 22/63 (34%), Positives = 29/63 (46%)
Query: 224 LTCSTDECLRLFD---KA-TGELLEEY--KGHKSGDFRIECCLDSKDSQ-IFCGSSDGKI 276
L +T + +FD K+ EL EY KG KS + S D Q +F G +D KI
Sbjct: 248 LCAATSSSITIFDLEKKSKVDELKPEYIEKGKKSREPECVSLAWSADGQTLFAGYTDNKI 307
Query: 277 YKW 279
W
Sbjct: 308 RAW 310
>UNIPROTKB|B4DQJ1 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000091644 OMA:HAGSVNE
EMBL:AL451070 EMBL:AC114495 HOVERGEN:HBG105197 UniGene:Hs.33962
HGNC:HGNC:30857 ChiTaRS:SNRNP40 EMBL:AK298823 IPI:IPI00006723
SMR:B4DQJ1 STRING:B4DQJ1 Ensembl:ENST00000446633 UCSC:uc010oge.2
Uniprot:B4DQJ1
Length = 409
Score = 201 (75.8 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 54/199 (27%), Positives = 92/199 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +GS + G D+ I LWN Y + T GH+ V + D S +
Sbjct: 66 EGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 125
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 126 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 185
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 186 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 245
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 246 EGS--YLLSNAMDNTVRVW 262
Score = 166 (63.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 222
Query: 127 KS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQL 159
+ R H L S+ S + + D + W +
Sbjct: 223 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 264
Score = 143 (55.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 166 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 224
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 225 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV--RPFAPKERCV 274
Score = 135 (52.6 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 196 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 255
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D +V +W+V P R + H + ++ ++ D S + +GS D V +WD
Sbjct: 256 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTT 315
Query: 128 SR 129
SR
Sbjct: 316 SR 317
Score = 132 (51.5 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 64 GHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 123
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ I T ++ V ++ + T I+S N++K+W ++
Sbjct: 184 KAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
Identities = 26/109 (23%), Positives = 57/109 (52%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + +GSY L+ D +++W+ P+ + +K + G+ H C D
Sbjct: 237 SVTGLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 296
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 115
S+IA+G++D+ V +W+ T+ + + + HA + V F+ D ++ +G
Sbjct: 297 GSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPIIETG 345
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 112 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 169
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 327
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 170 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 225
Score = 53 (23.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
++C S+I GS+D +Y W + L G +N + HP
Sbjct: 289 LRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGS--INEVAFHP 337
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 201 (75.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 53/211 (25%), Positives = 88/211 (41%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+T ++ I G +R V + T D+ IK+W+ +L T GH V
Sbjct: 153 WTLMRVISGHLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLA 212
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ + S DK V W++ T + +R + H S V +K + V+++ +D
Sbjct: 213 VSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVAR 272
Query: 123 MWDVKSRSH-HPIQ--------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 173
+WD+++R + H + + D Q+ GS D I W L ++TL H
Sbjct: 273 VWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHH-- 330
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 204
K V +L HP S +N+K W E
Sbjct: 331 KKTVRALSLHPDEFTFASGSSDNIKHWKFPE 361
Score = 149 (57.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 57/201 (28%), Positives = 80/201 (39%)
Query: 137 CLDSKD-SQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG 194
C+D + +Q FC G+ D I W L TL + A V L P ++ S CG
Sbjct: 168 CVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHI--ATVRGLAVSPRHPYLFS-CG 224
Query: 195 NN--VKLWTAEED------YGQEPIVDACFTRDCQCIL-TCSTDECLRLFDKATGELLEE 245
+ VK W E + +G V A +L T D R++D T + +
Sbjct: 225 EDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNVHV 284
Query: 246 YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 305
GHKS + + D Q+ GS D I W L ++TL H K V +L H
Sbjct: 285 LSGHKSTVASL--AVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHH--KKTVRALSLH 340
Query: 306 PTRKHIMSACGNNVKLWTAEE 326
P S +N+K W E
Sbjct: 341 PDEFTFASGSSDNIKHWKFPE 361
>ZFIN|ZDB-GENE-051120-180 [details] [associations]
symbol:taf5 "TAF5 RNA polymerase II, TATA box
binding protein (TBP)-associated factor" species:7955 "Danio rerio"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 ZFIN:ZDB-GENE-051120-180 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 HOVERGEN:HBG050226 OMA:ERQNNQI
OrthoDB:EOG469QW7 HOGENOM:HOG000212424 EMBL:CR812943
IPI:IPI00656497 UniGene:Dr.78627 ProteinModelPortal:B8JIQ0
Ensembl:ENSDART00000015007 ArrayExpress:B8JIQ0 Bgee:B8JIQ0
Uniprot:B8JIQ0
Length = 756
Score = 204 (76.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 50/182 (27%), Positives = 93/182 (51%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ RF+ + +Y T SD+ ++LW+ ++ + GH ++ + + +ASG++
Sbjct: 586 VTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGST 645
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D V+LW++ G + + H + +KF+ D ++ SGS DNTV +WDV
Sbjct: 646 DGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVMR------- 698
Query: 136 CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL--IHSVGKAVVNSLCSHPTRKHIMSAC 193
+D ++ F ++ G I+ L D+SQ L HS AV++ H TR++++ A
Sbjct: 699 -AIDDVETDDFTAAT-GHIH---LPDNSQELLLGTYHSKSTAVIHL---HFTRRNLLLAA 750
Query: 194 GN 195
G+
Sbjct: 751 GS 752
Score = 201 (75.8 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 58/197 (29%), Positives = 90/197 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + V F+ D +Y L+ D I+LW+ L Y GH + V D + SG
Sbjct: 500 GPVYGVSFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFVSG 559
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + VTC +F+ +S+ V +GS D TV +WDV + +
Sbjct: 560 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYVATGSSDRTVRLWDVLNGNCVR 619
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
H PI S + + GS+DG++ W + I+ L G + +L
Sbjct: 620 IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLWDIGHGLMIAELKGHTG--TIYALKFSR 677
Query: 185 TRKHIMS-ACGNNVKLW 200
+ I S + N V+LW
Sbjct: 678 DGEIIASGSIDNTVRLW 694
Score = 167 (63.8 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 43/167 (25%), Positives = 79/167 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +V
Sbjct: 531 FTCLVGYKGHNYPVWDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTR 590
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ +A+G+SD++V LW+V G VR + H + + F+ + + SGS D V+
Sbjct: 591 FHPNSNYVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVL 650
Query: 123 MWDV-------KSRSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H I S+D +I GS D + W ++
Sbjct: 651 LWDIGHGLMIAELKGHTGTIYALKFSRDGEIIASGSIDNTVRLWDVM 697
Score = 125 (49.1 bits), Expect = 0.00013, P = 0.00013
Identities = 53/233 (22%), Positives = 100/233 (42%)
Query: 100 VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
+T V F +DSS++ G D+TV +W V + ++ + D + SD + +
Sbjct: 429 LTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVK---SAADLNLIDKESDDVLERIMD 485
Query: 160 VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEE-----DY-GQE-PI 211
+S S ++H V S P R +++S+ + ++LW+ + Y G P+
Sbjct: 486 EKTSSESKILHGHSGPVYGVSFS-PDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPV 544
Query: 212 VDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCG 270
D F+ ++ D RL+ + L + GH + + C +S + G
Sbjct: 545 WDTQFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLAD---VTCTRFHPNSNYVATG 601
Query: 271 SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGNNVKLW 322
SSD + W +++ + + I + K ++SL P K + S + V LW
Sbjct: 602 SSDRTVRLWDVLNGNCVR--IFTGHKGPIHSLAFSPNGKFLASGSTDGRVLLW 652
>TAIR|locus:2092707 [details] [associations]
symbol:RACK1C_AT "AT3G18130" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0048364 "root
development" evidence=IGI] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0009845 "seed germination" evidence=IGI]
[GO:0071215 "cellular response to abscisic acid stimulus"
evidence=IEP] [GO:0005829 "cytosol" evidence=RCA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
process" evidence=RCA] [GO:0009220 "pyrimidine ribonucleotide
biosynthetic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048364 GO:GO:0009845
GO:GO:0004871 GO:GO:0071215 GO:GO:0048367 EMBL:AB020749 HSSP:P16649
HOGENOM:HOG000091643 KO:K14753 ProtClustDB:CLSN2682135
EMBL:AY050338 EMBL:AY101529 IPI:IPI00545680 RefSeq:NP_188441.1
UniGene:At.22741 ProteinModelPortal:Q9LV28 SMR:Q9LV28 IntAct:Q9LV28
STRING:Q9LV28 PaxDb:Q9LV28 PRIDE:Q9LV28 EnsemblPlants:AT3G18130.1
GeneID:821338 KEGG:ath:AT3G18130 GeneFarm:2980 TAIR:At3g18130
InParanoid:Q9LV28 OMA:NCKLRNS PhylomeDB:Q9LV28
Genevestigator:Q9LV28 Uniprot:Q9LV28
Length = 326
Score = 196 (74.1 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 53/202 (26%), Positives = 99/202 (49%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V + DG + L+ D +++LW+ + + GH +V + D+ QI S +
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASR 125
Query: 76 DKSVILWEVTTGQ---PVRRWREHASKVTCVKFNEDSSV--VISGSQDNTVMMWDV---K 127
D+++ LW T G+ + H V+CV+F+ ++ V ++S S D TV +W++ K
Sbjct: 126 DRTIKLWN-TLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCK 184
Query: 128 SRSH---HP--IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
R+ H + S D + G DG I W L + ++ +L G ++++SLC
Sbjct: 185 LRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL--EAG-SIIHSLC 241
Query: 182 SHPTRKHIMSACGNNVKLWTAE 203
P R + +A N++++W E
Sbjct: 242 FSPNRYWLCAATENSIRIWDLE 263
Score = 160 (61.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/127 (29%), Positives = 62/127 (48%)
Query: 16 IRAVRFNVDGS-YCLTCGSDKKIKLWNPYRNLLLKTYG-------GHAHEVNDATAACDS 67
+ A+ +D S +T DK I LW ++ K+YG GH+H V D + D
Sbjct: 18 VTAIATPIDNSDIIVTASRDKSIILWKLTKDD--KSYGVAQRRLTGHSHFVEDVVLSSDG 75
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
SG+ D + LW++ TG+ RR+ H V V F+ D+ ++S S+D T+ +W+
Sbjct: 76 QFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTL 135
Query: 128 SRSHHPI 134
+ I
Sbjct: 136 GECKYTI 142
Score = 129 (50.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 54/239 (22%), Positives = 103/239 (43%)
Query: 103 VKFNEDSSVVI--SGSQDNTVMMWDVKSRSH-HPIQCCLDSKDSQI-FCGSSDGKIYKWQ 158
V + D S+++ D + + + H H ++ + S D Q GS DG++ W
Sbjct: 32 VTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWD 91
Query: 159 LVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNNVKLW--------TAEEDYGQE 209
L + H+ K V++ S R+ + ++ +KLW T E G +
Sbjct: 92 LATGETTRRFVGHT--KDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHK 149
Query: 210 PIVDAC-FTRDC--QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 266
V F+ + I++ S D+ +++++ +L GH SG + + S
Sbjct: 150 EWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGH-SG-YLNTVAVSPDGSL 207
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
G DG I W L + ++ +L G ++++SLC P R + +A N++++W E
Sbjct: 208 CASGGKDGVILLWDLAEGKKLYSL--EAG-SIIHSLCFSPNRYWLCAATENSIRIWDLE 263
Score = 116 (45.9 bits), Expect = 0.00035, P = 0.00035
Identities = 26/97 (26%), Positives = 52/97 (53%)
Query: 34 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 93
DK +K+WN L + GH+ +N + D S ASG D ++LW++ G+ +
Sbjct: 172 DKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSL 231
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
E S + + F+ + + + ++ N++ +WD++S+S
Sbjct: 232 -EAGSIIHSLCFSPNRYWLCAATE-NSIRIWDLESKS 266
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 202 (76.2 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 55/208 (26%), Positives = 95/208 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
G + + RF D S L+C D I+ W+ + N +L Y GHA+ V D + S A
Sbjct: 340 GPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVL--YQGHAYPVWDLDISPHSLFFA 397
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------ 125
S + D + LW P+R + H + V CVKF+ +S+ + +GS D TV +W
Sbjct: 398 SASYDHTARLWSFDRTYPLRIYAGHLAGVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNS 457
Query: 126 VKSRSHH--PIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCS 182
V+ + H P++C S + Q + + ++ K W L + L H + + S
Sbjct: 458 VRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLYKDL-HGHTDDITSVTFS 516
Query: 183 HPTRKHIMSACGNNVKLWTAEEDYGQEP 210
+ ++ N+V++W + + P
Sbjct: 517 LDSSVIASASMDNSVRIWDIKSKHNSTP 544
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 69/286 (24%), Positives = 118/286 (41%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYG---GHAHEVNDATAACDSSQIASGASDKSVI 80
D T ++ IKLW+ K + H H +ND T D A+++ V+
Sbjct: 279 DNKLLATGLNNSSIKLWSLTSKFKSKPHQIDVSHIHLIND-TLEVDEEDRT--ATERKVL 335
Query: 81 LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-H 132
L G H V +F DSS ++S S+D ++ WD++S + H +
Sbjct: 336 L-----G--------HCGPVYSTRFLPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAY 382
Query: 133 PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS 191
P+ S S F +S D W + + I++ A V+ + HP ++ +
Sbjct: 383 PVWDLDISPHSLFFASASYDHTARLWSFDRTYPLR--IYAGHLAGVDCVKFHPNSNYLAT 440
Query: 192 -ACGNNVKLWTAEEDYGQEPIVDAC-------FTRDCQCILTCSTDECLRLFDKATGELL 243
+ V+LW+A++ C F+ + Q +++ D+ L+L+D A+G L
Sbjct: 441 GSTDKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQYLVSAGEDQLLKLWDLASGTLY 500
Query: 244 EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQIST 289
++ GH + LDS S I S D + W + S ST
Sbjct: 501 KDLHGHTDDITSVTFSLDS--SVIASASMDNSVRIWD-IKSKHNST 543
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 202 (76.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 58/209 (27%), Positives = 92/209 (44%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
G + + RF D S L+C D I+ W+ + N +L Y GHA+ V D + S A
Sbjct: 361 GPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDLDISPYSLYFA 418
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
SG+ D++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W + +
Sbjct: 419 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNS 478
Query: 131 ------HH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H P+ S + + + D ++ W L + L + SL
Sbjct: 479 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSLTF 536
Query: 183 HPTRKHIMSAC-GNNVKLWTAEEDYGQEP 210
P I SA N+V++W Y P
Sbjct: 537 SPDSSLIASASMDNSVRVWDIRNTYCSTP 565
Score = 154 (59.3 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 68/275 (24%), Positives = 119/275 (43%)
Query: 26 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
S L G D IKLW+ R+ LK+ H +V+ ACD + D +
Sbjct: 298 SKLLAAGFDNSCIKLWS-LRSKKLKSEP-HQVDVSRIHLACDILEEEDDEDDNA------ 349
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQC 136
G ++ R H V +F DSS ++S S+D ++ WD+ S + H +P+
Sbjct: 350 --GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 407
Query: 137 CLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACG 194
S S F GS D W + + I++ A V+ + HP ++ + +
Sbjct: 408 LDISPYSLYFASGSHDRTARLWSFDRTYPLR--IYAGHLADVDCVKFHPNSNYLATGSTD 465
Query: 195 NNVKLWTAEEDYG-------QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 247
V+LW+A++ + P++ F+ + + + + D+ L+L+D A+G L +E +
Sbjct: 466 KTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 525
Query: 248 GHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 281
GH I S DS + +S D + W +
Sbjct: 526 GHTDN---ITSLTFSPDSSLIASASMDNSVRVWDI 557
Score = 131 (51.2 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 33/119 (27%), Positives = 62/119 (52%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G + ++ F+ +G Y + G D+++KLW+ L K GH + T + DSS IAS
Sbjct: 486 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIAS 545
Query: 73 GASDKSVILWEV-----------TTGQPVRRWREHASKVTCVKFNEDSSVVISG-SQDN 119
+ D SV +W++ ++G+ V + S V V+F + ++++G +Q+N
Sbjct: 546 ASMDNSVRVWDIRNTYCSTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQEN 604
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 200 (75.5 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F+ DG + +T DK IK+W+ YR L + H H V A + D I S +
Sbjct: 105 VRSVDFSADGQFLVTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR---SHH 132
DK++ +W+ T+ Q V + + V F+ + + + S D+ V +WD++ H+
Sbjct: 165 DKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHY 224
Query: 133 PIQ-C---CLDSKDS--QIFCGSSDGKIYKWQLVDSSQISTL 168
+ C CL S + SSDG + LV+ I TL
Sbjct: 225 QVHSCGVNCLSFHPSGNSLVTASSDGTVKILDLVEGRLIYTL 266
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 64/268 (23%), Positives = 112/268 (41%)
Query: 42 PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVT 101
P +L + + GH + A + + QIA+ + D ++LW + R+ H VT
Sbjct: 5 PEDPILERYFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVT 64
Query: 102 CVKFNEDSSVVISGSQDNTVMMW--DVKSRSH----H--PIQCCLDSKDSQIFCGSSDGK 153
++F+ +++ S S+D TV +W D K +S H P++ S D Q +S+ K
Sbjct: 65 SLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASEDK 124
Query: 154 IYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEEDYGQEP 210
K W + + +L V P + I+S C + +K+W
Sbjct: 125 SIKVWSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVS-CSEDKTIKIWDTTSKQCVNN 181
Query: 211 IVDAC-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDS 262
D+ F+ + CI + +D +R++D LL+ Y+ H G + C
Sbjct: 182 FSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCG---VNCLSFHP 238
Query: 263 KDSQIFCGSSDGKIYKWQLVDSSQISTL 290
+ + SSDG + LV+ I TL
Sbjct: 239 SGNSLVTASSDGTVKILDLVEGRLIYTL 266
Score = 154 (59.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 47/197 (23%), Positives = 85/197 (43%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ +++F+ G+ + DK ++LW R + H V + D + + +
Sbjct: 63 VTSLQFSPQGNLLASASRDKTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE 122
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DKS+ +W + + + H V C KF+ D +++S S+D T+ +WD S+ Q
Sbjct: 123 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTSK-----Q 177
Query: 136 CCLDSKDSQIF-----------CGSSDGKIYKWQLVDSSQISTLIH-SVGKAVVNSLCSH 183
C + DS F C +S G + ++ D L H V VN L H
Sbjct: 178 CVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFH 237
Query: 184 PTRKHIMSACGNN-VKL 199
P+ +++A + VK+
Sbjct: 238 PSGNSLVTASSDGTVKI 254
Score = 139 (54.0 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV G V F+ +G+ + GSD +++W+ N LL+ Y H+ VN +
Sbjct: 178 CVNNFSDSVGFANFVDFSPNGTCIASAGSDHAVRIWDIRMNRLLQHYQVHSCGVNCLSFH 237
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ + + +SD +V + ++ G+ + + H V V F++D + SG D V++W
Sbjct: 238 PSGNSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLVW 297
Query: 125 DVKSRSHH 132
H
Sbjct: 298 RTSFNQVH 305
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 199 (75.1 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 56/199 (28%), Positives = 81/199 (40%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F+ DG + T DK IK+W+ YR L + H H V A + D I S +
Sbjct: 63 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 122
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHH 132
DK++ +W+ T Q V + + V FN + + S D TV +WDV K H+
Sbjct: 123 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 182
Query: 133 PIQC----CLDSKDS--QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
+ C+ S + SSDG + L++ I TL G S S
Sbjct: 183 QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF-SKGGE 241
Query: 187 KHIMSACGNNVKLWTAEED 205
V LW D
Sbjct: 242 LFASGGADTQVLLWRTNFD 260
Score = 172 (65.6 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 62/260 (23%), Positives = 109/260 (41%)
Query: 39 LWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHAS 98
LWN + Y GH V + + +AS + D++V LW ++ H +
Sbjct: 2 LWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTA 61
Query: 99 KVTCVKFNEDSSVVISGSQDNTVMMWDV-KSR------SH-HPIQCCLDSKDSQIFCGSS 150
V V F+ D + + S+D ++ +W + + R H H ++C S D ++ S
Sbjct: 62 PVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 121
Query: 151 DGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAE----- 203
+ K K W + ++ SVG A N + +P+ I SA + VK+W
Sbjct: 122 EDKTIKIWDTTNKQCVNNFSDSVGFA--NFVDFNPSGTCIASAGSDQTVKVWDVRVNKLL 179
Query: 204 EDYGQEPIVDAC--FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLD 261
+ Y C F ++T S+D L++ D G L+ +GH F +
Sbjct: 180 QHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF--- 236
Query: 262 SKDSQIFC-GSSDGKIYKWQ 280
SK ++F G +D ++ W+
Sbjct: 237 SKGGELFASGGADTQVLLWR 256
Score = 159 (61.0 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 45/192 (23%), Positives = 85/192 (44%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ +V+F+ G+ + D+ ++LW P + + H V + D +A+ +
Sbjct: 21 VTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE 80
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DKS+ +W + + + H V C KF+ D +++S S+D T+ +WD ++ Q
Sbjct: 81 DKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-----Q 135
Query: 136 CCLDSKDSQIF-----------C---GSSDGKIYKWQL-VDSSQISTLIHSVGKAVVNSL 180
C + DS F C SD + W + V+ +HS G VN +
Sbjct: 136 CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG---VNCI 192
Query: 181 CSHPTRKHIMSA 192
HP+ ++++A
Sbjct: 193 SFHPSGNYLITA 204
Score = 136 (52.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV G V FN G+ + GSD+ +K+W+ N LL+ Y H+ VN +
Sbjct: 136 CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFH 195
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ + + +SD ++ + ++ G+ + + H V V F++ + SG D V++W
Sbjct: 196 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 255
Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 59/267 (22%), Positives = 100/267 (37%)
Query: 80 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW--DVKSR-----SHH 132
+LW R+ H VT V+F+ +++ S S+D TV +W D + + +H
Sbjct: 1 MLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHT 60
Query: 133 -PIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
P++ S D Q +S+ K K W + + +L V P + I+
Sbjct: 61 APVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIV 118
Query: 191 SACGNN--VKLWTAEEDYGQEPIVDAC-------FTRDCQCILTCSTDECLRLFDKATGE 241
S C + +K+W D+ F CI + +D+ ++++D +
Sbjct: 119 S-CSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNK 177
Query: 242 LLEEYKGHKSGDFRIECC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN 300
LL+ Y+ H G + C + + SSDG + L++ I TL G
Sbjct: 178 LLQHYQVHSGG---VNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTV 234
Query: 301 SLCSHPTRKHIMSACGNNVKLWTAEED 327
S S V LW D
Sbjct: 235 SF-SKGGELFASGGADTQVLLWRTNFD 260
>POMBASE|SPCC5E4.03c [details] [associations]
symbol:taf5 "SAGA complex subunit/TATA-binding protein
associated factor/transcription factor TFIID complex subunit Taf5"
species:4896 "Schizosaccharomyces pombe" [GO:0000124 "SAGA complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005669 "transcription
factor TFIID complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IC] [GO:0016573 "histone
acetylation" evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 PomBase:SPCC5E4.03c
GO:GO:0005829 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016573 GO:GO:0006338 GO:GO:0000124
InterPro:IPR013720 Pfam:PF08513 GO:GO:0006367 GO:GO:0005669
KO:K03130 OMA:ERQNNQI HOGENOM:HOG000212424 EMBL:AB001372 PIR:T41454
RefSeq:NP_587902.1 ProteinModelPortal:O13282 IntAct:O13282
STRING:O13282 PRIDE:O13282 EnsemblFungi:SPCC5E4.03c.1
GeneID:2539353 KEGG:spo:SPCC5E4.03c OrthoDB:EOG4S1XG9
NextBio:20800518 Uniprot:O13282
Length = 643
Score = 202 (76.2 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 39/124 (31%), Positives = 68/124 (54%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ + +Y LT SDK +LW+ +R ++ + GH V A D +AS S
Sbjct: 466 VDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADS 525
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSRSHHPI 134
+ + LW++ TG+ ++ R H + + F+ +S+V++SG D TV WDV K+ ++P+
Sbjct: 526 EGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNNPV 585
Query: 135 QCCL 138
L
Sbjct: 586 SSSL 589
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 47/165 (28%), Positives = 72/165 (43%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D Y L+C D +LW+ L Y GH V D A+
Sbjct: 380 GPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATA 439
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-- 131
+ D++ LW P+R + H S V CV F+ +S+ V++GS D T +WDV R H
Sbjct: 440 SHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVH-RGHSV 498
Query: 132 -----H--PIQCCLDSKDSQIFCGS-SDGKIYKWQLVDSSQISTL 168
H P+ + D + S+G I+ W + +I T+
Sbjct: 499 RVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTM 543
>UNIPROTKB|I3LTI2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007219 "Notch signaling pathway" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0001826 "inner cell mass
cell differentiation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 GO:GO:0005730
Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GeneTree:ENSGT00690000102167 InterPro:IPR011047 SUPFAM:SSF50998
PRINTS:PR00319 GO:GO:0001826 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 CTD:54475 EMBL:FP565655
RefSeq:XP_003358201.1 Ensembl:ENSSSCT00000026878 GeneID:100626208
KEGG:ssc:100626208 Uniprot:I3LTI2
Length = 485
Score = 160 (61.4 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 37/103 (35%), Positives = 59/103 (57%)
Query: 29 LTCGSDK-KIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L GSD + LW+P + L GH +N + DS IAS + DKS+ LW+ T
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRT 403
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 129
G+ + R H + V + ++ DS +++SGS D+T+ +WDVK++
Sbjct: 404 GKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQ 446
Score = 150 (57.9 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 44/178 (24%), Positives = 76/178 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C +++ A+ +V F+ G Y + D ++ W+ T GH H V + +
Sbjct: 106 CTSSLEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWS 165
Query: 65 CDSSQIASGASDKSVILWEVTTGQPV-RRWREHASKVTCVKF-----NEDSSVVISGSQD 118
D ++ASG + ++LW+ +TG+ V R H+ +T + + N + V S S+D
Sbjct: 166 PDGKKLASGCKNGQILLWDPSTGKQVGRALAGHSKWITALSWEPLHANPECRYVASSSKD 225
Query: 119 NTVMMWDVKS-------RSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLVDSSQISTL 168
+V +WD + H CL D ++ S D I W+ D TL
Sbjct: 226 GSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDRTIKVWRAHDGVLCRTL 283
Score = 140 (54.3 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 33/112 (29%), Positives = 51/112 (45%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
Q I V F+ D + DK IKLW+ L + GH V + DS + S
Sbjct: 372 QALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVS 431
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
G+SD ++ +W+V + HA +V V ++ D V SG +D + +W
Sbjct: 432 GSSDSTLKVWDVKAQKLAADLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
Score = 95 (38.5 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 199 LWTAEEDY-------GQEPIVD-ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHK 250
LW+ ED G + +++ F+ D + I + S D+ ++L+D TG+ L +GH
Sbjct: 355 LWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASFDKSIKLWDGRTGKYLASLRGHV 414
Query: 251 SGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
+ ++I DS+ + GSSD + W +
Sbjct: 415 AAVYQIAWSADSR--LLVSGSSDSTLKVWDV 443
Score = 54 (24.1 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNNVKLW 322
++ GS D ++ W + + L G +A++N + P + I SA ++KLW
Sbjct: 343 RLVSGSDDFTLFLWSPAEDKK--PLARMTGHQALINQVLFSPDSRIIASASFDKSIKLW 399
>CGD|CAL0000124 [details] [associations]
symbol:ASC1 species:5476 "Candida albicans" [GO:0005092
"GDP-dissociation inhibitor activity" evidence=IGI;ISA] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IGI;ISA]
[GO:0007155 "cell adhesion" evidence=IMP] [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0022627 "cytosolic small ribosomal
subunit" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036170
"filamentous growth of a population of unicellular organisms in
response to starvation" evidence=IMP] [GO:0010255 "glucose mediated
signaling pathway" evidence=IEA] [GO:0032995 "regulation of
fungal-type cell wall biogenesis" evidence=IEA] [GO:0031139
"positive regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0032956 "regulation of actin cytoskeleton
organization" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0043022 "ribosome binding"
evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 194 (73.4 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 59/201 (29%), Positives = 96/201 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
++ V + DG+Y L+ D+ ++LW+ + + GH +V + A + QI S +
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFN--EDSSVVISGSQDNTVMMWDVKSRS--- 130
DK+V +W T G+ + H V+ V+ + + SS VIS S D TV WD+ S
Sbjct: 129 DKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 131 ---HHP--IQCCLDSKDSQIFCGSS--DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
H I C S D + C S+ DG I W L + + TL KA V++L
Sbjct: 188 DFIGHTGYISCITLSPDGSL-CASAGKDGVIILWDLNKNKTLYTL---EAKAEVHALAFS 243
Query: 184 PTRKHIMSACGNNVKLWTAEE 204
P R + +A + +K++ +E
Sbjct: 244 PNRYWLAAATTSGIKIFKLQE 264
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 54/244 (22%), Positives = 103/244 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K++ GH+H V D T + D + S + D+++ LW++ TG+ +R+ H V V ++
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 109 SSVVISGSQDNTVMMWDVKSR------SHHP----IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++S S+D TV +W+ H+ ++ + S + S D + W
Sbjct: 120 LRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWD 179
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK-LWTAEED---YGQEPIVDA 214
L D S + I G ++ + P SA + V LW ++ Y E +
Sbjct: 180 LADYSVNADFIGHTG--YISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEV 237
Query: 215 ---CFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS 271
F+ + + L +T +++F LL+E K +F + ++ S
Sbjct: 238 HALAFSPN-RYWLAAATTSGIKIFKLQERSLLDELKP----EFAVGATAKDPEAISLAWS 292
Query: 272 SDGK 275
+DG+
Sbjct: 293 ADGQ 296
>UNIPROTKB|P83774 [details] [associations]
symbol:ASC1 "Guanine nucleotide-binding protein subunit
beta-like protein" species:237561 "Candida albicans SC5314"
[GO:0001403 "invasive growth in response to glucose limitation"
evidence=IMP] [GO:0005092 "GDP-dissociation inhibitor activity"
evidence=ISA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:0036180 "filamentous growth of a population of unicellular
organisms in response to biotic stimulus" evidence=IMP] [GO:0036244
"cellular response to neutral pH" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0000124 GO:GO:0005737 GO:GO:0071216 GO:GO:0036244
GO:GO:0036180 GO:GO:0036178 GO:GO:0009405 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007155 GO:GO:0007186
GO:GO:0009267 EMBL:AP006852 GO:GO:0001403 GO:GO:0036170
EMBL:AACQ01000156 RefSeq:XP_712478.1 RefSeq:XP_888749.1
ProteinModelPortal:P83774 STRING:Q59S46 COMPLUYEAST-2DPAGE:P83774
GeneID:3645907 GeneID:3704151 KEGG:cal:CaO19.6906
KEGG:cal:CaO19_6906 GO:GO:0005092 Uniprot:P83774
Length = 317
Score = 194 (73.4 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 59/201 (29%), Positives = 96/201 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
++ V + DG+Y L+ D+ ++LW+ + + GH +V + A + QI S +
Sbjct: 69 VQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKNLRQIVSASR 128
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFN--EDSSVVISGSQDNTVMMWDVKSRS--- 130
DK+V +W T G+ + H V+ V+ + + SS VIS S D TV WD+ S
Sbjct: 129 DKTVKVWN-TIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWDLADYSVNA 187
Query: 131 ---HHP--IQCCLDSKDSQIFCGSS--DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
H I C S D + C S+ DG I W L + + TL KA V++L
Sbjct: 188 DFIGHTGYISCITLSPDGSL-CASAGKDGVIILWDLNKNKTLYTL---EAKAEVHALAFS 243
Query: 184 PTRKHIMSACGNNVKLWTAEE 204
P R + +A + +K++ +E
Sbjct: 244 PNRYWLAAATTSGIKIFKLQE 264
Score = 144 (55.7 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 54/244 (22%), Positives = 103/244 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K++ GH+H V D T + D + S + D+++ LW++ TG+ +R+ H V V ++
Sbjct: 60 KSFKGHSHIVQDVTISADGAYALSASWDRTLRLWDLETGETTQRFVGHKGDVLSVSIAKN 119
Query: 109 SSVVISGSQDNTVMMWDVKSR------SHHP----IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++S S+D TV +W+ H+ ++ + S + S D + W
Sbjct: 120 LRQIVSASRDKTVKVWNTIGECMATLTGHNDWVSAVRISPSDQSSTVISASWDKTVKSWD 179
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK-LWTAEED---YGQEPIVDA 214
L D S + I G ++ + P SA + V LW ++ Y E +
Sbjct: 180 LADYSVNADFIGHTG--YISCITLSPDGSLCASAGKDGVIILWDLNKNKTLYTLEAKAEV 237
Query: 215 ---CFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS 271
F+ + + L +T +++F LL+E K +F + ++ S
Sbjct: 238 HALAFSPN-RYWLAAATTSGIKIFKLQERSLLDELKP----EFAVGATAKDPEAISLAWS 292
Query: 272 SDGK 275
+DG+
Sbjct: 293 ADGQ 296
>RGD|1309198 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 GeneTree:ENSGT00690000101787
OrthoDB:EOG4JM7Q0 IPI:IPI00366805 ProteinModelPortal:D4A944
PRIDE:D4A944 Ensembl:ENSRNOT00000016325 ArrayExpress:D4A944
Uniprot:D4A944
Length = 359
Score = 196 (74.1 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 53/199 (26%), Positives = 92/199 (46%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +GS + G D+ I LW+ Y + T GH+ V + D S +
Sbjct: 67 EGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 126
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 127 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 186
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 187 AIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 246
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 247 EGS--YLLSNAMDNTVRVW 263
Score = 166 (63.5 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 41/162 (25%), Positives = 74/162 (45%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 105 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 164
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ ++ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 165 PQLVCTGSDDGTVKLWDIRKKAAIQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 223
Query: 127 KS-------RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQL 159
+ R H L S+ S + + D + W +
Sbjct: 224 RQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV 265
Score = 143 (55.4 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 35/112 (31%), Positives = 58/112 (51%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 167 LVCTGSDDGTVKLWDIRKKAAIQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 225
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 226 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRVWDV--RPFAPKERCV 275
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 43/165 (26%), Positives = 73/165 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + S +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 65 GHEGEVYCCKFHPNGSTLASAGFDRLILLWSVYGDCDNYATLKGHSGAVMELHYNTDGSM 124
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 125 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 184
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ I T ++ V ++ + T I+S N++K+W ++
Sbjct: 185 KAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 197 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 256
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMW 124
D +V +W+V P R + H + ++ ++ D S + +GS D+ + W
Sbjct: 257 DNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAAGSADSFLYPW 313
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 30/119 (25%), Positives = 58/119 (48%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
+++ + D + + STD+ + ++D TGE ++ KGH S F C + Q+ C
Sbjct: 113 VMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTS--FVNSCYPARRGPQLVCT 170
Query: 270 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 327
GS DG + W + + I T ++ V ++ + T I+S N++K+W ++
Sbjct: 171 GSDDGTVKLWDIRKKAAIQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 226
Score = 46 (21.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 134 IQCCLDSKDSQIFCGSSDGKIYKW 157
++C S+I GS+D +Y W
Sbjct: 290 LRCSWSPDGSKIAAGSADSFLYPW 313
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 199 (75.1 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 56/199 (28%), Positives = 81/199 (40%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F+ DG + T DK IK+W+ YR L + H H V A + D I S +
Sbjct: 105 VRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHH 132
DK++ +W+ T Q V + + V FN + + S D TV +WDV K H+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHY 224
Query: 133 PIQC----CLDSKDS--QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
+ C+ S + SSDG + L++ I TL G S S
Sbjct: 225 QVHSGGVNCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF-SKGGE 283
Query: 187 KHIMSACGNNVKLWTAEED 205
V LW D
Sbjct: 284 LFASGGADTQVLLWRTNFD 302
Score = 188 (71.2 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 67/286 (23%), Positives = 120/286 (41%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ AI ++ + +G T D + LWN + Y GH V + + +AS
Sbjct: 18 KAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLAS 77
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSR-- 129
+ D++V LW ++ H + V V F+ D + + S+D ++ +W + + R
Sbjct: 78 ASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFL 137
Query: 130 ----SH-HPIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSH 183
H H ++C S D ++ S+ K K W + ++ SVG A N + +
Sbjct: 138 YSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFA--NFVDFN 195
Query: 184 PTRKHIMSACGNN-VKLWTAE-----EDYGQEPIVDAC--FTRDCQCILTCSTDECLRLF 235
P+ I SA + VK+W + Y C F ++T S+D L++
Sbjct: 196 PSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKIL 255
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 280
D G L+ +GH F + SK ++F G +D ++ W+
Sbjct: 256 DLLEGRLIYTLQGHTGPVFTVSF---SKGGELFASGGADTQVLLWR 298
Score = 152 (58.6 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 65/301 (21%), Positives = 116/301 (38%)
Query: 46 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 105
+L + + GH + + + Q+A+ + D ++LW R+ H VT V+F
Sbjct: 9 VLERYFKGHKAAITSLDLSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQF 68
Query: 106 NEDSSVVISGSQDNTVMMW--DVKSR-----SHH-PIQCCLDSKDSQIFCGSSDGKIYK- 156
+ +++ S S+D TV +W D + + +H P++ S D Q +S+ K K
Sbjct: 69 SPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKV 128
Query: 157 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEEDYGQEPIVDA 214
W + + +L V P + I+S C + +K+W D+
Sbjct: 129 WSMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVS-CSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 215 C-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDSKDSQ 266
F CI + +D+ ++++D +LL+ Y+ H G + C +
Sbjct: 186 VGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGG---VNCISFHPSGNY 242
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 326
+ SSDG + L++ I TL G S S V LW
Sbjct: 243 LITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSF-SKGGELFASGGADTQVLLWRTNF 301
Query: 327 D 327
D
Sbjct: 302 D 302
Score = 136 (52.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV G V FN G+ + GSD+ +K+W+ N LL+ Y H+ VN +
Sbjct: 178 CVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFH 237
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ + + +SD ++ + ++ G+ + + H V V F++ + SG D V++W
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFASGGADTQVLLW 297
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 201 (75.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 52/177 (29%), Positives = 92/177 (51%)
Query: 20 RFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSV 79
+F+ G Y +C D+ ++W+ R L+ GH +V+ + + IA+G+SDK+V
Sbjct: 467 QFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTV 526
Query: 80 ILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPIQ--- 135
LW+V TG+ VR + H S V + + D + SG +D T+MMWD+ + R P+
Sbjct: 527 RLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN 586
Query: 136 CCLDS-----KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV-VNSLCSHPTR 186
C+ S + S + GS+D + W + S++++ G + + SL + PT+
Sbjct: 587 SCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTK 643
Score = 189 (71.6 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 57/198 (28%), Positives = 92/198 (46%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + + F+ G + L+ +D I+LW+ N L Y GH + V DA + AS
Sbjct: 419 GPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASC 478
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+ D++ +W + QP+R H S V CV+++ + + + +GS D TV +WDV++
Sbjct: 479 SHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVR 538
Query: 131 ----HHPIQCCLD-SKDSQIFC-GSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSH 183
H + L S D + G DG I W L + I+ L+ H+ + V SL
Sbjct: 539 IFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN---SCVWSLSYS 595
Query: 184 PTRKHIMSACGN-NVKLW 200
+ S + VKLW
Sbjct: 596 GEGSLLASGSADCTVKLW 613
Score = 156 (60.0 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 32/113 (28%), Positives = 62/113 (54%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V+++ + +Y T SDK ++LW+ ++ + GH V + D +ASG
Sbjct: 505 VDCVQWHPNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDE 564
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
D ++++W+++T + + H S V + ++ + S++ SGS D TV +WDV S
Sbjct: 565 DGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTS 617
>UNIPROTKB|J9P544 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:J9P544 Ensembl:ENSCAFT00000045166 Uniprot:J9P544
Length = 510
Score = 199 (75.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 274
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 275 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 333 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 389
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 390 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 438
Score = 171 (65.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 290 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 345
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 346 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 403
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 404 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 438
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C++++++ +ISG +DN++ +WD S H CL + I
Sbjct: 206 ENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVT 263
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 264 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 318
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 319 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 374
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 375 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 429
Query: 316 GNNVKLW 322
+K+W
Sbjct: 430 DGKIKVW 436
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 331 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 386
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 387 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 440
Score = 143 (55.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 58/249 (23%), Positives = 103/249 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 255
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +W
Sbjct: 256 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVW 313
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 373
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 374 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 428
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 429 YDGKIKVWD 437
>UNIPROTKB|B4DH70 [details] [associations]
symbol:FBXW11 "cDNA FLJ54601, highly similar to F-box/WD
repeat protein 11" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AC011410 HOGENOM:HOG000006638
HOVERGEN:HBG002521 OrthoDB:EOG4F1X2M UniGene:Hs.484138
HGNC:HGNC:13607 EMBL:AC011387 EMBL:AC113342 EMBL:AK294956
IPI:IPI01013614 SMR:B4DH70 STRING:B4DH70 Ensembl:ENST00000425623
UCSC:uc011dey.1 Uniprot:B4DH70
Length = 510
Score = 199 (75.1 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 217 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 274
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 275 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 332
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 333 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 389
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 390 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 438
Score = 171 (65.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 290 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 345
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 346 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 403
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 404 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 438
Score = 155 (59.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C++++++ +ISG +DN++ +WD S H CL + I
Sbjct: 206 ENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVT 263
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 264 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 318
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 319 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 374
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 375 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 429
Query: 316 GNNVKLW 322
+K+W
Sbjct: 430 DGKIKVW 436
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 331 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 386
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 387 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 440
Score = 143 (55.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 58/249 (23%), Positives = 103/249 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 198 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 255
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +W
Sbjct: 256 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVW 313
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 314 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 373
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 374 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 428
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 429 YDGKIKVWD 437
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 200 (75.5 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 58/209 (27%), Positives = 92/209 (44%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
G + + RF D S L+C D I+ W+ + N +L Y GHA+ V D + S A
Sbjct: 343 GPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDLDISPYSLYFA 400
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
SG+ D++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W + +
Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNS 460
Query: 131 ------HH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H P+ S + + + D ++ W L + L + SL
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSLTF 518
Query: 183 HPTRKHIMSAC-GNNVKLWTAEEDYGQEP 210
P I SA N+V++W Y P
Sbjct: 519 SPDSGLIASASMDNSVRVWDIRNTYCSAP 547
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 68/275 (24%), Positives = 119/275 (43%)
Query: 26 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
S L G D IKLW+ R+ LK+ H +V+ ACD + D +
Sbjct: 280 SKLLAAGFDNSCIKLWS-LRSKKLKSEP-HQVDVSRIHLACDILEEEDDEDDNA------ 331
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQC 136
G ++ R H V +F DSS ++S S+D ++ WD+ S + H +P+
Sbjct: 332 --GTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 389
Query: 137 CLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACG 194
S S F GS D W + + I++ A V+ + HP ++ + +
Sbjct: 390 LDISPYSLYFASGSHDRTARLWSFDRTYPLR--IYAGHLADVDCVKFHPNSNYLATGSTD 447
Query: 195 NNVKLWTAEEDYG-------QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 247
V+LW+A++ + P++ F+ + + + + D+ L+L+D A+G L +E +
Sbjct: 448 KTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR 507
Query: 248 GHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 281
GH I S DS + +S D + W +
Sbjct: 508 GHTDN---ITSLTFSPDSGLIASASMDNSVRVWDI 539
Score = 125 (49.1 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G + ++ F+ +G Y + G D+++KLW+ L K GH + T + DS IAS
Sbjct: 468 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIAS 527
Query: 73 GASDKSVILWEV 84
+ D SV +W++
Sbjct: 528 ASMDNSVRVWDI 539
>UNIPROTKB|E2RTE4 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AAEX03003014
ProteinModelPortal:E2RTE4 Ensembl:ENSCAFT00000026749 Uniprot:E2RTE4
Length = 529
Score = 199 (75.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 236 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 293
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 294 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 351
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 352 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 408
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 409 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 457
Score = 171 (65.3 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 309 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 364
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 365 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 422
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 423 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 457
Score = 155 (59.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C++++++ +ISG +DN++ +WD S H CL + I
Sbjct: 225 ENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVT 282
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 283 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 337
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 338 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 393
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 394 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 448
Query: 316 GNNVKLW 322
+K+W
Sbjct: 449 DGKIKVW 455
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 350 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 405
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 406 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 459
Score = 143 (55.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 58/249 (23%), Positives = 103/249 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 217 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 274
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +W
Sbjct: 275 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVW 332
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 333 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 392
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 393 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 447
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 448 YDGKIKVWD 456
>UNIPROTKB|F1MLG0 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045862 "positive
regulation of proteolysis" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0031648 "protein destabilization" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:DAAA02049882
EMBL:DAAA02049883 IPI:IPI00699126 Ensembl:ENSBTAT00000061118
Uniprot:F1MLG0
Length = 530
Score = 199 (75.1 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 237 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 294
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 295 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 352
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 353 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 409
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 410 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 458
Score = 171 (65.3 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 310 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 365
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 366 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 423
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 424 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 458
Score = 155 (59.6 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C++++++ +ISG +DN++ +WD S H CL + I
Sbjct: 226 ENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVT 283
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 284 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 338
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 339 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 394
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 395 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 449
Query: 316 GNNVKLW 322
+K+W
Sbjct: 450 DGKIKVW 456
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 351 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 406
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 407 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 460
Score = 143 (55.4 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 58/249 (23%), Positives = 103/249 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 218 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 275
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +W
Sbjct: 276 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVW 333
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 334 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 393
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 394 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 448
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 449 YDGKIKVWD 457
>TAIR|locus:2089303 [details] [associations]
symbol:AT3G16650 "AT3G16650" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AB022217 GO:GO:0080008 HOGENOM:HOG000207595
ProtClustDB:CLSN2685622 EMBL:X82826 EMBL:AY054181 EMBL:BT020378
IPI:IPI00521576 RefSeq:NP_566557.1 UniGene:At.104
ProteinModelPortal:Q39190 SMR:Q39190 IntAct:Q39190 STRING:Q39190
EnsemblPlants:AT3G16650.1 GeneID:820917 KEGG:ath:AT3G16650
GeneFarm:2851 TAIR:At3g16650 InParanoid:Q39190 OMA:HKKTVRA
PhylomeDB:Q39190 Genevestigator:Q39190 GermOnline:AT3G16650
Uniprot:Q39190
Length = 479
Score = 198 (74.8 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 47/193 (24%), Positives = 86/193 (44%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R+V F+ + T +D+ IK+W+ +L T GH +V + + + S
Sbjct: 171 GWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSA 230
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-- 131
DK V W++ + +R + H V C+ + VV++G +D+ +WD++++
Sbjct: 231 GDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIRTKMQIF 290
Query: 132 ---HP---IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
H D Q+ GS D I W L ++T+ + K V ++ HP
Sbjct: 291 VLPHDSDVFSVLARPTDPQVITGSHDSTIKFWDLRYGKSMATITNH--KKTVRAMALHPK 348
Query: 186 RKHIMSACGNNVK 198
+SA +N+K
Sbjct: 349 ENDFVSASADNIK 361
Score = 38 (18.4 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLF 235
I AC+ + ++TC D+ ++++
Sbjct: 431 IYAACYDQTGSRLVTCEGDKTIKMW 455
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 198 (74.8 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 48/162 (29%), Positives = 76/162 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F+ DG + + DK IK+WN YR L + H H V A + D I S +
Sbjct: 105 VRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSRSHH 132
DK++ +W+ T Q V + + V FN + + + S D+TV +WD+ K H+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHY 224
Query: 133 PIQC----CLDSKDS--QIFCGSSDGKIYKWQLVDSSQISTL 168
+ C+ S + SSDG + L++ I TL
Sbjct: 225 QVHSGGVNCVSFHPSGNYLITASSDGTLKILDLLEGRLIYTL 266
Score = 159 (61.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 59/269 (21%), Positives = 112/269 (41%)
Query: 41 NPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKV 100
+P +L + + GH + + + Q+A+G+ D ++LW + R+ H +
Sbjct: 4 SPEDPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVI 63
Query: 101 TCVKFNEDSSVVISGSQDNTVMMW--DVKSRSH----H--PIQCCLDSKDSQIFCGSSDG 152
T V+F+ +++ S S+D T+ +W D + +S H P++ S D Q +S+
Sbjct: 64 TSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASED 123
Query: 153 KIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEEDYGQE 209
K K W + + +L V P + I+S C + +K+W
Sbjct: 124 KSIKVWNMYRQRFLYSLYRHTHW--VRCAKFSPDGRLIVS-CSEDKTIKIWDTTNKQCVN 180
Query: 210 PIVD-------ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LD 261
D F + CI + +D ++++D +LL+ Y+ H G + C
Sbjct: 181 NFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGG---VNCVSFH 237
Query: 262 SKDSQIFCGSSDGKIYKWQLVDSSQISTL 290
+ + SSDG + L++ I TL
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTL 266
Score = 154 (59.3 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 46/189 (24%), Positives = 83/189 (43%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
I +V+F+ G+ + D+ I+LW P + + H V + D +AS +
Sbjct: 63 ITSVQFSPLGNLLASASRDRTIRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLASASE 122
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DKS+ +W + + + H V C KF+ D +++S S+D T+ +WD ++ Q
Sbjct: 123 DKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-----Q 177
Query: 136 CCLDSKDSQIF-----------CGSSDGKIYKWQLVDSSQISTLIH-SVGKAVVNSLCSH 183
C + D F C +S G + ++ D L H V VN + H
Sbjct: 178 CVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 184 PTRKHIMSA 192
P+ ++++A
Sbjct: 238 PSGNYLITA 246
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 31/120 (25%), Positives = 57/120 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV G V FN +G+ + GSD +K+W+ N LL+ Y H+ VN +
Sbjct: 178 CVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFH 237
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ + + +SD ++ + ++ G+ + + H V V F++ + SG D V++W
Sbjct: 238 PSGNYLITASSDGTLKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFTSGGADAQVLLW 297
>UNIPROTKB|F1PBF1 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 KO:K03362 GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AAEX03003014 RefSeq:XP_866627.1
ProteinModelPortal:F1PBF1 Ensembl:ENSCAFT00000026752 GeneID:479291
KEGG:cfa:479291 Uniprot:F1PBF1
Length = 542
Score = 199 (75.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 306
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 307 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 365 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 421
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 422 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 470
Score = 171 (65.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 322 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 377
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 378 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 435
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 436 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 470
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C++++++ +ISG +DN++ +WD S H CL + I
Sbjct: 238 ENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVT 295
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 296 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 350
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 351 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 406
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 407 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 461
Query: 316 GNNVKLW 322
+K+W
Sbjct: 462 DGKIKVW 468
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 363 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 418
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 472
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 58/249 (23%), Positives = 103/249 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 287
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +W
Sbjct: 288 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVW 345
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 405
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 406 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 460
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 461 YDGKIKVWD 469
>UNIPROTKB|Q9UKB1 [details] [associations]
symbol:FBXW11 "F-box/WD repeat-containing protein 11"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] [GO:0042347 "negative
regulation of NF-kappaB import into nucleus" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;NAS] [GO:0016567
"protein ubiquitination" evidence=IDA;NAS] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IDA] [GO:0006470 "protein
dephosphorylation" evidence=ISS] [GO:0042753 "positive regulation
of circadian rhythm" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0031648 "protein destabilization"
evidence=IMP] [GO:0045862 "positive regulation of proteolysis"
evidence=IMP] [GO:0005813 "centrosome" evidence=IDA] [GO:0005829
"cytosol" evidence=ISS;TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 Reactome:REACT_6900
GO:GO:0045892 GO:GO:0045893
Pathway_Interaction_DB:wnt_canonical_pathway
Pathway_Interaction_DB:ps1pathway GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0000209
Pathway_Interaction_DB:hdac_classi_pathway
Pathway_Interaction_DB:nfkappabatypicalpathway
Pathway_Interaction_DB:nfkappabcanonicalpathway GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 GO:GO:0042753 HOGENOM:HOG000006638
HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M EMBL:AF176022
EMBL:AB033279 EMBL:AB033280 EMBL:AB033281 EMBL:AB014596
EMBL:AK314999 EMBL:BC026213 IPI:IPI00301283 IPI:IPI00306671
IPI:IPI00328796 RefSeq:NP_036432.2 RefSeq:NP_387448.2
RefSeq:NP_387449.2 UniGene:Hs.484138 ProteinModelPortal:Q9UKB1
SMR:Q9UKB1 DIP:DIP-27593N IntAct:Q9UKB1 MINT:MINT-120522
STRING:Q9UKB1 PhosphoSite:Q9UKB1 DMDM:13124267 PRIDE:Q9UKB1
DNASU:23291 Ensembl:ENST00000265094 Ensembl:ENST00000296933
Ensembl:ENST00000393802 GeneID:23291 KEGG:hsa:23291 UCSC:uc003mbl.1
UCSC:uc003mbm.1 UCSC:uc003mbn.1 CTD:23291 GeneCards:GC05M171288
HGNC:HGNC:13607 MIM:605651 neXtProt:NX_Q9UKB1 PharmGKB:PA28050
InParanoid:Q9UKB1 OMA:FDQWSEA PhylomeDB:Q9UKB1
Pathway_Interaction_DB:nfkappabalternativepathway GenomeRNAi:23291
NextBio:45108 ArrayExpress:Q9UKB1 Bgee:Q9UKB1 CleanEx:HS_FBXW11
Genevestigator:Q9UKB1 GermOnline:ENSG00000072803 Uniprot:Q9UKB1
Length = 542
Score = 199 (75.1 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 65/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 249 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 306
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 307 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 365 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 421
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 422 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 470
Score = 171 (65.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 322 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 377
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 378 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 435
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 436 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 470
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C++++++ +ISG +DN++ +WD S H CL + I
Sbjct: 238 ENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVT 295
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 296 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 350
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 351 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 406
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 407 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 461
Query: 316 GNNVKLW 322
+K+W
Sbjct: 462 DGKIKVW 468
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 363 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 418
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 472
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 58/249 (23%), Positives = 103/249 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 230 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 287
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +W
Sbjct: 288 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVW 345
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 346 DMASATDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 405
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 406 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 460
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 461 YDGKIKVWD 469
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 193 (73.0 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 69/284 (24%), Positives = 113/284 (39%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
AI +V F+++ + D +K+W+ + GH V + +ASG+
Sbjct: 22 AITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPSGHLVASGS 81
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------S 128
DK+V LW + ++ H + V V F+ D +++ S D T+ +W V S
Sbjct: 82 RDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVWTVHRQKFLFS 141
Query: 129 RSHHP--IQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
S H ++C S D ++ +SD K K W I + G A N + HP+
Sbjct: 142 LSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFA--NHVEFHPS 199
Query: 186 RKHIMSA-CGNNVKLWTAE-----EDYGQEP--IVDACFTRDCQCILTCSTDECLRLFDK 237
I +A VK+W + Y + F ++T S D L++ D
Sbjct: 200 GTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSFHPSGNYLITASNDSTLKILDL 259
Query: 238 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 280
G LL GH+ C S+ F G SD ++ W+
Sbjct: 260 LEGRLLYTLHGHQGP---ATCVAFSRTGDFFASGGSDEQVMVWK 300
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/121 (25%), Positives = 56/121 (46%)
Query: 5 CVQTIDCKQGAI-RAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
C+ + C+ G V F+ G+ G+DK +K+W+ N LL+ Y H VN +
Sbjct: 180 CIHSF-CEHGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLSF 238
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ + + ++D ++ + ++ G+ + H TCV F+ SG D VM+
Sbjct: 239 HPSGNYLITASNDSTLKILDLLEGRLLYTLHGHQGPATCVAFSRTGDFFASGGSDEQVMV 298
Query: 124 W 124
W
Sbjct: 299 W 299
Score = 145 (56.1 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 64/271 (23%), Positives = 107/271 (39%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH + + + Q+ASG+ D + +W + H V CV+F+
Sbjct: 12 LERHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 107 EDSSVVISGSQDNTVMMW--DVKSRSH----HP--IQCCLDSKDSQIFCGSSDGKIYK-W 157
+V SGS+D TV +W VK S H ++ S D Q +SD K K W
Sbjct: 72 PSGHLVASGSRDKTVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 158 QLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDAC- 215
+ + +L + V P + I SA + VKLW + +E I C
Sbjct: 132 TVHRQKFLFSLSQHINW--VRCARFSPDGRLIASASDDKTVKLW---DKTSRECIHSFCE 186
Query: 216 ---FTRDCQ------CILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 266
F + CI TD+ ++++D LL+ Y+ H + + +
Sbjct: 187 HGGFANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHTAAVNSLS--FHPSGNY 244
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 297
+ S+D + L++ + TL G A
Sbjct: 245 LITASNDSTLKILDLLEGRLLYTLHGHQGPA 275
Score = 140 (54.3 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 54/247 (21%), Positives = 107/247 (43%)
Query: 91 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR-------SHHPIQCCLDSKDS 143
R +R H +T V F+ + + SGS D+ + +W +K + H C+ S
Sbjct: 14 RHFRGHRDAITSVDFSLNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFSPS 73
Query: 144 Q--IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
+ GS D + W V S + + + A V S+ + +++A + +K+W
Sbjct: 74 GHLVASGSRDKTVCLW--VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIKVW 131
Query: 201 TAEED---YGQEPIVD--AC--FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 253
T + ++ C F+ D + I + S D+ ++L+DK + E + + H G
Sbjct: 132 TVHRQKFLFSLSQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEH--GG 189
Query: 254 FRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI--HSVGKAVVNSLCSHPTRKHI 311
F + I +D + W + +++ L+ + V A VNSL HP+ ++
Sbjct: 190 FANHVEFHPSGTCIAAAGTDKTVKVWDV----RMNRLLQHYQVHTAAVNSLSFHPSGNYL 245
Query: 312 MSACGNN 318
++A ++
Sbjct: 246 ITASNDS 252
>UNIPROTKB|F1MVN1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:DAAA02058986 EMBL:DAAA02058987
EMBL:DAAA02058988 EMBL:DAAA02058989 EMBL:DAAA02058990
EMBL:DAAA02058991 IPI:IPI00717164 UniGene:Bt.25271
Ensembl:ENSBTAT00000009830 Uniprot:F1MVN1
Length = 569
Score = 199 (75.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 66/234 (28%), Positives = 114/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ +T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 276 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 333
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 334 VNTGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 391
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 392 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 448
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W LV
Sbjct: 449 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLV 498
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 349 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 404
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 405 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 462
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W LV
Sbjct: 463 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 498
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 263 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 320
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 321 ITGSSDSTVRVWDVNTGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 375
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 376 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 433
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 434 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 486
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 487 AYDGKIKVW 495
Score = 137 (53.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 57/249 (22%), Positives = 102/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 257 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 314
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 315 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 372
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 373 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 432
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 433 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 487
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 488 YDGKIKVWD 496
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 197 (74.4 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 51/201 (25%), Positives = 89/201 (44%)
Query: 14 GAIRAVRFN-VDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
G +R V + VD + +T +D +K+W+ L T GH V D + + S
Sbjct: 140 GWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVAVSDRHPYLFS 199
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR--- 129
+ DK+V W++ Q +R + H S V V + ++ + +D+ + +WD+++R
Sbjct: 200 VSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPV 259
Query: 130 ----SHH-PI-QCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
H PI Q D Q+ S+D + W +V + L H K V + H
Sbjct: 260 ITLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHH--KRSVRATALH 317
Query: 184 PTRKHIMSACGNNVKLWTAEE 204
P + SAC ++++ W E
Sbjct: 318 PKEFSVASACTDDIRSWGLAE 338
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 47/203 (23%), Positives = 80/203 (39%)
Query: 134 IQC-CLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS 191
++C +D D++ F GS+D + W L +TL V V + ++ S
Sbjct: 142 VRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHV--MTVRDVAVSDRHPYLFS 199
Query: 192 ACGNN-VKLWTAEED------YGQ-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELL 243
+ VK W E++ YG + I T D ++L+D T +
Sbjct: 200 VSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSVIKLWDMRTRIPV 259
Query: 244 EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 303
GHK +++C D Q+ S+D + W +V + L H K V +
Sbjct: 260 ITLVGHKGPINQVQCT--PVDPQVVSSSTDATVRLWDVVAGKTMKVLTHH--KRSVRATA 315
Query: 304 SHPTRKHIMSACGNNVKLWTAEE 326
HP + SAC ++++ W E
Sbjct: 316 LHPKEFSVASACTDDIRSWGLAE 338
>UNIPROTKB|F1S8U2 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 OMA:NAYLKPM
GeneTree:ENSGT00690000101849 EMBL:CU469143 EMBL:CT737224
EMBL:CT737143 Ensembl:ENSSSCT00000011555 Uniprot:F1S8U2
Length = 506
Score = 198 (74.8 bits), Expect = 3.9e-13, P = 3.9e-13
Identities = 65/234 (27%), Positives = 114/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ +T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 270
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 271 VNTGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 329 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 385
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L+
Sbjct: 386 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLI 435
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 286 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 341
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 342 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 399
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W L+
Sbjct: 400 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLI 435
Score = 154 (59.3 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 200 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 257
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 258 ITGSSDSTVRVWDVNTGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 312
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 313 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 370
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 371 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 423
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 424 AYDGKIKVW 432
Score = 137 (53.3 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 57/249 (22%), Positives = 102/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 251
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 252 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 309
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 369
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 370 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 424
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 425 YDGKIKVWD 433
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 201 (75.8 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 56/208 (26%), Positives = 96/208 (46%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
TC +T+ G + + F+ D Y L+ DK ++LW+ + L +Y GH H V D +
Sbjct: 517 TC-KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSF 575
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ A+ + D++ LW P+R + H + V CV F+ + V +GS D T M
Sbjct: 576 SPLGHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRM 635
Query: 124 WDVKSRSH------H--PIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
WDV + H P+ D + + GS DG I W + ++ + GK
Sbjct: 636 WDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQM-RGHGK 694
Query: 175 AVVNSLCSHPTRKHIMSACG--NNVKLW 200
+ SL S+ +++ + G + V++W
Sbjct: 695 NAIYSL-SYSKEGNVLISGGADHTVRVW 721
Score = 167 (63.8 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 31/119 (26%), Positives = 64/119 (53%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ +G Y T SDK ++W+ ++ + GH V D +++G+
Sbjct: 612 VDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSE 671
Query: 76 DKSVILWEVTTGQPVRRWREHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP 133
D + +W++ TG+ +++ R H + + ++++ +V+ISG D+TV +WD+K + P
Sbjct: 672 DGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKKATTEP 730
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 199 (75.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 57/209 (27%), Positives = 92/209 (44%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
G + + RF D S L+C D I+ W+ + N +L Y GHA+ V D + S A
Sbjct: 343 GPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDVDISPYSLYFA 400
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
SG+ D++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W + +
Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNS 460
Query: 131 ------HH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H P+ S + + + D ++ W L + L + SL
Sbjct: 461 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDN--ITSLTF 518
Query: 183 HPTRKHIMSAC-GNNVKLWTAEEDYGQEP 210
P I SA N+V++W + P
Sbjct: 519 SPDSSLIASASMDNSVRVWDIRNTHCSAP 547
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 69/275 (25%), Positives = 119/275 (43%)
Query: 26 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
S L G D IKLW+ R+ LK H +V+ ACD I D+ +
Sbjct: 280 SKLLAAGFDNSCIKLWS-LRSKKLKPEP-HRVDVSRIHLACD---ILEEEDDE-----DD 329
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQC 136
G ++ R H V +F DSS ++S S+D ++ WD+ S + H +P+
Sbjct: 330 DVGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 389
Query: 137 CLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACG 194
S S F GS D W + + I++ A V+ + HP ++ + +
Sbjct: 390 VDISPYSLYFASGSHDRTARLWSFDRTYPLR--IYAGHLADVDCVKFHPNSNYLATGSTD 447
Query: 195 NNVKLWTAEEDYG-------QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 247
V+LW+A++ + P++ F+ + + + + D+ L+L+D A+G L +E +
Sbjct: 448 KTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Query: 248 GHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 281
GH I S DS + +S D + W +
Sbjct: 508 GHTDN---ITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 130 (50.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G + ++ F+ +G Y + G D+++KLW+ L K GH + T + DSS IAS
Sbjct: 468 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSLIAS 527
Query: 73 GASDKSVILWEV 84
+ D SV +W++
Sbjct: 528 ASMDNSVRVWDI 539
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 199 (75.1 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 53/208 (25%), Positives = 94/208 (45%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y + I G + V ++ + T +D+ IK+W+ L T GH + + D
Sbjct: 276 YKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIK 335
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ + + S D V W++ + +R + H S V C+ + +++SG +D V
Sbjct: 336 ISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVR 395
Query: 123 MWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 173
+WD++++S H + C S + Q+ GS D I W L + +L H
Sbjct: 396 VWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHH-- 453
Query: 174 KAVVNSLCSHPTRKHIMSACG-NNVKLW 200
K + SL HP ++ +CG +NVK+W
Sbjct: 454 KKSIRSLSIHPF-EYSFCSCGTDNVKVW 480
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 56/248 (22%), Positives = 92/248 (37%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
+IR ++ + Y +CG D ++K W+ N +++ Y GH V + + SG
Sbjct: 330 SIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGG 389
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------S 128
D V +W++ T V H V + V+SGSQD + +WD+ S
Sbjct: 390 RDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRIS 449
Query: 129 RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH-P- 184
+HH I+ FC + W D+ + I + SL P
Sbjct: 450 LTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADA-EFDRNITGFNSIINCSLIKQDPY 508
Query: 185 -TRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL 243
I+ NN +L + G + D + + C FDK+ L+
Sbjct: 509 FNDSSILILGSNNGQLHFYDWSSGYK--YDTLSNKVVPGTVECENSTLSMAFDKSESRLI 566
Query: 244 EEYKGHKS 251
+ G KS
Sbjct: 567 TTH-GDKS 573
Score = 123 (48.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 57/222 (25%), Positives = 89/222 (40%)
Query: 134 IQCC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 192
+ C +D + GS+D I W L TL + + + ++ S
Sbjct: 289 VNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINS--IRDIKISKKNPYLFS- 345
Query: 193 CG--NNVKLWTAE-----EDYGQEPIVDACFTR--DCQCILTCSTDECLRLFDKATGELL 243
CG N VK W E DY C + +++ D +R++D T +
Sbjct: 346 CGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSV 405
Query: 244 EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 303
GH +G + C S + Q+ GS D I W L + +L H K + SL
Sbjct: 406 FVLSGH-TGTV-MSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHH--KKSIRSLS 461
Query: 304 SHPTRKHIMSACG-NNVKLWT---AEEDYGQAGLSSLYLNMS 341
HP ++ +CG +NVK+W AE D G +S+ +N S
Sbjct: 462 IHPF-EYSFCSCGTDNVKVWCGADAEFDRNITGFNSI-INCS 501
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 91 RRWREHA-SKVTCVKFN 106
R RE+ K+TC+K N
Sbjct: 108 RNIRENVLKKLTCIKMN 124
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 199 (75.1 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 53/208 (25%), Positives = 94/208 (45%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y + I G + V ++ + T +D+ IK+W+ L T GH + + D
Sbjct: 276 YKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDIK 335
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ + + S D V W++ + +R + H S V C+ + +++SG +D V
Sbjct: 336 ISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVR 395
Query: 123 MWDVKSRSH------HP---IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 173
+WD++++S H + C S + Q+ GS D I W L + +L H
Sbjct: 396 VWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHH-- 453
Query: 174 KAVVNSLCSHPTRKHIMSACG-NNVKLW 200
K + SL HP ++ +CG +NVK+W
Sbjct: 454 KKSIRSLSIHPF-EYSFCSCGTDNVKVW 480
Score = 146 (56.5 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 56/248 (22%), Positives = 92/248 (37%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
+IR ++ + Y +CG D ++K W+ N +++ Y GH V + + SG
Sbjct: 330 SIRDIKISKKNPYLFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGG 389
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------S 128
D V +W++ T V H V + V+SGSQD + +WD+ S
Sbjct: 390 RDAVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRIS 449
Query: 129 RSHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH-P- 184
+HH I+ FC + W D+ + I + SL P
Sbjct: 450 LTHHKKSIRSLSIHPFEYSFCSCGTDNVKVWCGADA-EFDRNITGFNSIINCSLIKQDPY 508
Query: 185 -TRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELL 243
I+ NN +L + G + D + + C FDK+ L+
Sbjct: 509 FNDSSILILGSNNGQLHFYDWSSGYK--YDTLSNKVVPGTVECENSTLSMAFDKSESRLI 566
Query: 244 EEYKGHKS 251
+ G KS
Sbjct: 567 TTH-GDKS 573
Score = 123 (48.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 57/222 (25%), Positives = 89/222 (40%)
Query: 134 IQCC-LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 192
+ C +D + GS+D I W L TL + + + ++ S
Sbjct: 289 VNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINS--IRDIKISKKNPYLFS- 345
Query: 193 CG--NNVKLWTAE-----EDYGQEPIVDACFTR--DCQCILTCSTDECLRLFDKATGELL 243
CG N VK W E DY C + +++ D +R++D T +
Sbjct: 346 CGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRDAVVRVWDIRTKSSV 405
Query: 244 EEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 303
GH +G + C S + Q+ GS D I W L + +L H K + SL
Sbjct: 406 FVLSGH-TGTV-MSICSQSVEPQVVSGSQDKMIRLWDLNNGKCRISLTHH--KKSIRSLS 461
Query: 304 SHPTRKHIMSACG-NNVKLWT---AEEDYGQAGLSSLYLNMS 341
HP ++ +CG +NVK+W AE D G +S+ +N S
Sbjct: 462 IHPF-EYSFCSCGTDNVKVWCGADAEFDRNITGFNSI-INCS 501
Score = 38 (18.4 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 91 RRWREHA-SKVTCVKFN 106
R RE+ K+TC+K N
Sbjct: 108 RNIRENVLKKLTCIKMN 124
>UNIPROTKB|E2RDC4 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0043122 "regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0033598 "mammary
gland epithelial cell proliferation" evidence=IEA] [GO:0031648
"protein destabilization" evidence=IEA] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945 KO:K03362
OMA:NAYLKPM GeneTree:ENSGT00690000101849 EMBL:AAEX03015480
EMBL:AAEX03015479 RefSeq:XP_543980.3 ProteinModelPortal:E2RDC4
Ensembl:ENSCAFT00000015696 GeneID:486851 KEGG:cfa:486851
NextBio:20860562 Uniprot:E2RDC4
Length = 605
Score = 199 (75.1 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 66/234 (28%), Positives = 114/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ +T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 370 VNTGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 484
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W LV
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 385 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 440
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 498
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W LV
Sbjct: 499 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 154 (59.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 299 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 356
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 357 ITGSSDSTVRVWDVNTGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 411
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 469
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 470 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 522
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 523 AYDGKIKVW 531
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 57/249 (22%), Positives = 102/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 350
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 351 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 408
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 468
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 469 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 523
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 524 YDGKIKVWD 532
>UNIPROTKB|Q68DS0 [details] [associations]
symbol:DKFZp781N011 "Putative uncharacterized protein
DKFZp781N011" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AL627424 EMBL:AL133387 EMBL:AL445463
RefSeq:NP_003930.1 RefSeq:NP_378663.1 UniGene:Hs.643802
UniGene:Hs.713753 GeneID:8945 KEGG:hsa:8945 CTD:8945 HGNC:HGNC:1144
HOVERGEN:HBG002521 KO:K03362 ChiTaRS:BTRC GenomeRNAi:8945
EMBL:CR749295 IPI:IPI01012795 RefSeq:NP_001243785.1 SMR:Q68DS0
STRING:Q68DS0 Ensembl:ENST00000393441 Uniprot:Q68DS0
Length = 564
Score = 198 (74.8 bits), Expect = 4.9e-13, P = 4.9e-13
Identities = 66/234 (28%), Positives = 113/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 271 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 328
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 329 VNTGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 386
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 387 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 443
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W LV
Sbjct: 444 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLV 493
Score = 186 (70.5 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 344 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 399
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 400 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 457
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W LV
Sbjct: 458 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 493
Score = 154 (59.3 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 258 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 315
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 316 ITGSSDSTVRVWDVNTGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 370
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 371 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 428
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 429 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 481
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 482 AYDGKIKVW 490
Score = 137 (53.3 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 57/249 (22%), Positives = 102/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 252 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQ 309
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 310 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 367
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 368 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 427
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 428 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 482
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 483 YDGKIKVWD 491
>ASPGD|ASPL0000031743 [details] [associations]
symbol:AN8505 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001305 ProteinModelPortal:C8VEM4
EnsemblFungi:CADANIAT00002997 HOGENOM:HOG000234485 OMA:WDAQTGS
Uniprot:C8VEM4
Length = 954
Score = 201 (75.8 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 45/120 (37%), Positives = 67/120 (55%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
QT++ G + +V F+ DG L GS DK ++LW+P L +T GH++ V +
Sbjct: 731 QTLEGHSGWVLSVAFSPDGRL-LASGSFDKTVRLWDPATGSLQQTLRGHSNWVRSVAFSP 789
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +ASG+ DK+V LW+ TG + R H+ V V F+ D ++ SGS D TV +WD
Sbjct: 790 DGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSPDGRLLASGSFDKTVRLWD 849
Score = 177 (67.4 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 56/185 (30%), Positives = 88/185 (47%)
Query: 29 LTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 87
L GSD + ++LW+P L +T GH+ V + D +ASG+ DK+V LW+ TG
Sbjct: 710 LASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKTVRLWDPATG 769
Query: 88 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHP-IQCCLD 139
+ R H++ V V F+ D ++ SGS D TV +WD + R H ++
Sbjct: 770 SLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAF 829
Query: 140 SKDSQIFC-GSSDGKIYKWQLVDSSQISTLI--HSVGKAVVNSLCSHPTRK----HIMSA 192
S D ++ GS D + W + TLI +V + + S+ + +I S
Sbjct: 830 SPDGRLLASGSFDKTVRLWDPATGTLQQTLIIKGTVTELQFSQDGSYISTNLGSLNIQSR 889
Query: 193 CGNNV 197
CGNN+
Sbjct: 890 CGNNL 894
Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 36/107 (33%), Positives = 58/107 (54%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
QT+ +R+V F+ DG L GS DK ++LW+P L +T GH+ V +
Sbjct: 773 QTLRGHSNWVRSVAFSPDGRL-LASGSFDKTVRLWDPATGSLQQTLRGHSDTVRSVAFSP 831
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
D +ASG+ DK+V LW+ TG +++ VT ++F++D S +
Sbjct: 832 DGRLLASGSFDKTVRLWDPATGT-LQQTLIIKGTVTELQFSQDGSYI 877
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 195 (73.7 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 42/120 (35%), Positives = 65/120 (54%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F DG +T DK +K+W+ +R L + H + V A + D I S +
Sbjct: 106 VRSVHFCSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASD 165
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK+V LW+ T+ + V + EH VT V F+ + + + S DNTV +WDV R+H +Q
Sbjct: 166 DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDV--RTHRLLQ 223
Score = 178 (67.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 72/300 (24%), Positives = 128/300 (42%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH + + ++ Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAITSVDFSLNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 107 EDSSVVISGSQDNTVMMW--DVKS-----RSHHP-IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++ SGS+D TV +W +VK R+H ++ D Q +SD K K
Sbjct: 71 PSGHLLASGSRDKTVRIWIPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK-- 128
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSH--PTRKHIMSACGNN-VKLW--TAEE---DYGQEP 210
V S+ + S+ + + C+ P + I+SA + VKLW T+ E Y +
Sbjct: 129 -VWSTHRQKFLFSLSQHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 211 --IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ F CI S D ++++D T LL+ Y+ H + + + +
Sbjct: 188 GFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALS--FHPSGNYLL 245
Query: 269 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 327
SSD + L++ + TL G A ++ T ++ S + V +W + D
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPAT--TVAFSRTGEYFASGGSDEQVMVWKSNFD 303
Score = 141 (54.7 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 35/152 (23%), Positives = 71/152 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R RF+ DG ++ DK +KLW+ + +Y H V + IA+ +
Sbjct: 148 VRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASM 207
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
D +V +W+V T + ++ ++ H++ V + F+ + +++ S D+T+ + D+
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLMEGRLLYTL 267
Query: 129 RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQ 158
H P S+ + F G SD ++ W+
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 120 (47.3 bits), Expect = 0.00018, P = 0.00018
Identities = 31/122 (25%), Positives = 57/122 (46%)
Query: 5 CVQTIDCKQGA-IRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
CV + C+ G + V F+ G+ C+ S D +K+W+ + LL+ Y H+ VN +
Sbjct: 179 CVHSY-CEHGGFVTYVDFHPSGT-CIAAASMDNTVKVWDVRTHRLLQHYQLHSAAVNALS 236
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ + + +SD ++ + ++ G+ + H T V F+ SG D VM
Sbjct: 237 FHPSGNYLLTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVM 296
Query: 123 MW 124
+W
Sbjct: 297 VW 298
>ZFIN|ZDB-GENE-040426-978 [details] [associations]
symbol:snrnp40 "small nuclear ribonucleoprotein 40
(U5)" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040426-978 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003676 GO:GO:0030529
HSSP:P16649 HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 CTD:9410 HOVERGEN:HBG105197
OrthoDB:EOG4JM7Q0 EMBL:CU207343 EMBL:BC051783 IPI:IPI00506401
RefSeq:NP_956616.1 UniGene:Dr.133508 STRING:Q7ZTY9
Ensembl:ENSDART00000038230 GeneID:393292 KEGG:dre:393292
InParanoid:Q7ZTY9 NextBio:20814348 Uniprot:Q7ZTY9
Length = 347
Score = 193 (73.0 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 52/198 (26%), Positives = 91/198 (45%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ +G+ + G D+ I +WN Y + T GH+ V + D S +
Sbjct: 56 EGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLF 115
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSR- 129
S ++DK+V +W+ TG+ V+R + H S V +C + +GS D TV +WD++ +
Sbjct: 116 SASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRKKA 175
Query: 130 SHHPIQ-------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
S H Q + QI G D I W L + I ++ G +V S
Sbjct: 176 SVHTFQNTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSM-QGHGDSVTGLSLS 234
Query: 183 HPTRKHIMSACGNNVKLW 200
+ ++ N+V++W
Sbjct: 235 ADGSYLLSNSMDNSVRVW 252
Score = 165 (63.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 36/121 (29%), Positives = 62/121 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 94 TLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRG 153
Query: 68 SQIA-SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q+A +G+ D +V LW++ V + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 154 PQLACTGSDDGTVKLWDIRKKASVHTF-QNTYQVLSVTFNDTSDQIISGGIDNDIKVWDL 212
Query: 127 K 127
+
Sbjct: 213 R 213
Score = 157 (60.3 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 33/121 (27%), Positives = 65/121 (53%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + DGSY L+ D +++W+ P+ + +K + G+ H C D
Sbjct: 227 SVTGLSLSADGSYLLSNSMDNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSAD 286
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+IA+G++D+ V +W+ TT + V + HA V V F+ + +V+SGS D + + ++
Sbjct: 287 GSKIAAGSADRFVYIWDTTTRRIVYKLPGHAGSVNEVAFHPEEPIVLSGSSDKRLYIGEI 346
Query: 127 K 127
+
Sbjct: 347 Q 347
Score = 138 (53.6 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 48/203 (23%), Positives = 89/203 (43%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + + +AS D+ +++W V + + H+ V + +N D S+
Sbjct: 54 GHEGEVYCCKFHPNGATLASSGYDRLILMWNVYGDCENYATLKGHSGAVMELHYNTDGSL 113
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 114 LFSASTDKTVCVWDSETGERVKRLKGHTSFVNSCFPARRGPQLACTGSDDGTVKLWDIRK 173
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED---YGQE----PIVD 213
+ + T ++ V S+ + T I+S N++K+W ++ Y + +
Sbjct: 174 KASVHTFQNTYQ---VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTG 230
Query: 214 ACFTRDCQCILTCSTDECLRLFD 236
+ D +L+ S D +R++D
Sbjct: 231 LSLSADGSYLLSNSMDNSVRVWD 253
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + + T+ + ++V T S QI SG D + +W++
Sbjct: 156 LACTGSDDGTVKLWDIRKKASVHTFQ-NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQ 214
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL 138
+ + + H VT + + D S ++S S DN+V +WD+ R P + C+
Sbjct: 215 NKLIYSMQGHGDSVTGLSLSADGSYLLSNSMDNSVRVWDI--RPFAPKERCV 264
Score = 128 (50.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 32/122 (26%), Positives = 58/122 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ +V FN ++ G D IK+W+ +N L+ + GH V + + D S + S +
Sbjct: 186 VLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHGDSVTGLSLSADGSYLLSNSM 245
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D SV +W++ P R + H + ++ ++ D S + +GS D V +WD
Sbjct: 246 DNSVRVWDIRPFAPKERCVKIFQGNVHNFEKNLLRCSWSADGSKIAAGSADRFVYIWDTT 305
Query: 128 SR 129
+R
Sbjct: 306 TR 307
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 53/243 (21%), Positives = 97/243 (39%)
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
+ AA S Q+++ +S L P+ H +V C KF+ + + + S D
Sbjct: 24 ELVAAAQSQQLSAMGPPRSSSLQA-----PIMLLSGHEGEVYCCKFHPNGATLASSGYDR 78
Query: 120 TVMMWDV----------KSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 169
++MW+V K S ++ ++ S +F S+D + W ++ L
Sbjct: 79 LILMWNVYGDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVKRLK 138
Query: 170 -HSVGKAVVNSLCSHPTRKHIMSAC-GNN---VKLWTAEEDYGQEP------IVDACFTR 218
H+ + VNS C P R+ AC G++ VKLW + ++ F
Sbjct: 139 GHT---SFVNS-C-FPARRGPQLACTGSDDGTVKLWDIRKKASVHTFQNTYQVLSVTFND 193
Query: 219 DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK 278
I++ D ++++D +L+ +GH GD L + S + S D +
Sbjct: 194 TSDQIISGGIDNDIKVWDLRQNKLIYSMQGH--GDSVTGLSLSADGSYLLSNSMDNSVRV 251
Query: 279 WQL 281
W +
Sbjct: 252 WDI 254
>UNIPROTKB|F1P5E8 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GeneTree:ENSGT00690000101849 EMBL:AADN02035964
EMBL:AADN02035965 EMBL:AADN02035966 IPI:IPI00735168
Ensembl:ENSGALT00000003489 ArrayExpress:F1P5E8 Uniprot:F1P5E8
Length = 515
Score = 197 (74.4 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 65/233 (27%), Positives = 115/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 222 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 279
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + + I+ VG +A
Sbjct: 280 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 337
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 338 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 394
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 395 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 443
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 43/155 (27%), Positives = 74/155 (47%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ P L + GH VN D I
Sbjct: 295 AVLHLRFS--NGLMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 350
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 351 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 408
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 409 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 443
Score = 155 (59.6 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 61/247 (24%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C++++++ +ISG +DN++ +WD S H CL + I
Sbjct: 211 ENSKGVYCLQYDDEK--IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDERVIVT 268
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 269 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASP 323
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 324 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 379
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 380 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 434
Query: 316 GNNVKLW 322
+K+W
Sbjct: 435 DGKIKVW 441
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 336 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 391
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 392 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 445
Score = 142 (55.0 bits), Expect = 9.5e-07, P = 9.5e-07
Identities = 58/249 (23%), Positives = 103/249 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 203 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 260
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +W
Sbjct: 261 YDERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVW 318
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 319 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 378
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 379 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 433
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 434 YDGKIKVWD 442
>ZFIN|ZDB-GENE-040426-2903 [details] [associations]
symbol:fbxw11b "F-box and WD-40 domain protein
11b" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-040426-2903 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
GeneTree:ENSGT00690000101849 OMA:FDQWSEA EMBL:BX465186
EMBL:BC056809 IPI:IPI00494842 RefSeq:NP_998669.2 UniGene:Dr.75211
SMR:Q6PGW4 STRING:Q6PGW4 Ensembl:ENSDART00000019252 GeneID:406825
KEGG:dre:406825 CTD:406825 InParanoid:Q6PGW4 NextBio:20818332
Uniprot:Q6PGW4
Length = 527
Score = 197 (74.4 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 66/233 (28%), Positives = 113/233 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ T + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 234 DDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 291
Query: 126 VKSRS------HHPIQCCLDSK---DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V S HH + L + + C S D I W + + IS VG +A
Sbjct: 292 VNSGEVLNTLIHHN-EAVLHLRFCNGLMVTC-SKDRSIAVWDMASPTDISLRRVLVGHRA 349
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 350 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 406
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 407 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 455
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 348 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 403
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 457
Score = 134 (52.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 57/249 (22%), Positives = 102/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 215 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKQTLECLKILTGHTGSV--LCLQ 272
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V +G+ + H V ++F + ++++ S+D ++ +W
Sbjct: 273 YDERVIVTGSSDSTVRVWDVNSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVW 330
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 331 DMASPTDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRG 390
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 391 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 445
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 446 YDGKIKVWD 454
>UNIPROTKB|F1NYG1 [details] [associations]
symbol:BTRC "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0006470
"protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726
GO:GO:0006511 GO:GO:0019005 GO:GO:0045862 GO:GO:0000209
GO:GO:0071407 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0042753 OMA:NAYLKPM GeneTree:ENSGT00690000101849
EMBL:AADN02046404 IPI:IPI00684527 Ensembl:ENSGALT00000033197
Uniprot:F1NYG1
Length = 605
Score = 198 (74.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 66/234 (28%), Positives = 113/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 370 VNAGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 484
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W LV
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 385 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 440
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 498
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W LV
Sbjct: 499 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 153 (58.9 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 299 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 356
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 411
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 469
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 470 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 522
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 523 AYDGKIKVW 531
Score = 153 (58.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+WN ++T GH + A + S
Sbjct: 426 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 481
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/249 (22%), Positives = 101/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQ 350
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V G+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 408
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 468
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 469 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 523
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 524 YDGKIKVWD 532
Score = 42 (19.8 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 23/86 (26%), Positives = 36/86 (41%)
Query: 31 CGSDKKIKLWNPYRNLLLKTYGGHAHE-VNDATAACDSSQIASGASDKSVILWEVTTGQP 89
C +D+ + P +N L +TY A +N T S+ + + L T+
Sbjct: 60 CNNDEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLGSTAMKTENCVAKTKLANGTSSMI 119
Query: 90 VRRWRE-HAS----KVTCVKFNEDSS 110
V + R+ AS K CVK+ E S
Sbjct: 120 VPKQRKLSASYEKEKELCVKYFEQWS 145
>UNIPROTKB|Q9Y297 [details] [associations]
symbol:BTRC "F-box/WD repeat-containing protein 1A"
species:9606 "Homo sapiens" [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0006470 "protein dephosphorylation" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0033598
"mammary gland epithelial cell proliferation" evidence=IEA]
[GO:0042753 "positive regulation of circadian rhythm" evidence=IEA]
[GO:0043122 "regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA] [GO:0045309 "protein phosphorylated amino acid
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0051726 "regulation
of cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0031648 "protein destabilization" evidence=IMP] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0045862 "positive
regulation of proteolysis" evidence=IMP] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=TAS] [GO:0051437 "positive regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0051439 "regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=TAS] [GO:0045879 "negative regulation of
smoothened signaling pathway" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
SMART:SM01028 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0045892 Reactome:REACT_115566 GO:GO:0019048 GO:GO:0007165
GO:GO:0045893 GO:GO:0016032 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016874 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0016567
GO:GO:0051726 GO:GO:0043433 GO:GO:0019005 GO:GO:0045862
GO:GO:0000209 GO:GO:0031145 GO:GO:0051437 GO:GO:0071407
Reactome:REACT_24941 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0045879 GO:GO:0042753 PDB:1P22
PDBsum:1P22 EMBL:AL627424 EMBL:AF101784 EMBL:Y14153 EMBL:AF129530
EMBL:GU727631 EMBL:AK313353 EMBL:AL133387 EMBL:AL445463
EMBL:BC027994 IPI:IPI00307418 IPI:IPI00413142 RefSeq:NP_003930.1
RefSeq:NP_378663.1 UniGene:Hs.643802 UniGene:Hs.713753 PDB:2P64
PDBsum:2P64 ProteinModelPortal:Q9Y297 SMR:Q9Y297 DIP:DIP-31607N
IntAct:Q9Y297 MINT:MINT-108636 STRING:Q9Y297 PhosphoSite:Q9Y297
DMDM:13124271 PRIDE:Q9Y297 DNASU:8945 Ensembl:ENST00000370187
Ensembl:ENST00000408038 GeneID:8945 KEGG:hsa:8945 UCSC:uc001kta.3
UCSC:uc001ktb.3 CTD:8945 GeneCards:GC10P103103 HGNC:HGNC:1144
HPA:CAB032986 MIM:603482 neXtProt:NX_Q9Y297 PharmGKB:PA25465
HOGENOM:HOG000006638 HOVERGEN:HBG002521 InParanoid:Q9Y297 KO:K03362
OMA:NAYLKPM OrthoDB:EOG4F1X2M PhylomeDB:Q9Y297 ChiTaRS:BTRC
EvolutionaryTrace:Q9Y297 GenomeRNAi:8945 NextBio:33645
ArrayExpress:Q9Y297 Bgee:Q9Y297 CleanEx:HS_BTRC
Genevestigator:Q9Y297 Uniprot:Q9Y297
Length = 605
Score = 198 (74.8 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 66/234 (28%), Positives = 113/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 370 VNTGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 484
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W LV
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 45/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 385 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 440
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 498
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W LV
Sbjct: 499 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLV 534
Score = 154 (59.3 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 299 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 356
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 357 ITGSSDSTVRVWDVNTGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 411
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 469
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 470 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 522
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 523 AYDGKIKVW 531
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 57/249 (22%), Positives = 102/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSV--LCLQ 350
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V TG+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 351 YDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 408
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 468
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 469 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 523
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 524 YDGKIKVWD 532
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 195 (73.7 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 60/226 (26%), Positives = 102/226 (45%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y CV+T+ + VRF G ++ DK IK+W +KT GH V T
Sbjct: 180 YDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKIT 239
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ D S IAS ++D+++ W + G+ + +REH+ V C+ F+ + + I GS +T
Sbjct: 240 VSEDGSCIASCSNDQTIKTWNIVKGECLATYREHSHVVECLAFSTANIIDIPGSLLSTP- 298
Query: 123 MWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLC 181
+ KS+ L + + GS D I W+L ++T I H V ++
Sbjct: 299 --EGKSKVKQGPGGNLVGQCGYLATGSRDKTIKIWELATGRCLATYIGHDNW---VRAVR 353
Query: 182 SHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTC 226
HP K ++S + +++W + + I +A T C+ C
Sbjct: 354 FHPCGKFLLSVGDDKTIRVWDIAQGRCIKTINEA-HTHFISCLDFC 398
Score = 188 (71.2 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 76/324 (23%), Positives = 134/324 (41%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ I +V+F+ S ++ D IK+W+ +T GH + V D + +AS
Sbjct: 106 RNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLAS 165
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------V 126
++D ++ LW+ T V+ H V+CV+F +IS S+D T+ +W+ +
Sbjct: 166 CSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCI 225
Query: 127 KSRSHHP--IQCCLDSKDSQIFCG-SSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
K+ H ++ S+D S+D I W +V ++T HS VV L
Sbjct: 226 KTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNIVKGECLATYREHS---HVVECLAF 282
Query: 183 HPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL 242
+ +I+ G+ + + Q P C + T S D+ +++++ ATG
Sbjct: 283 --STANIIDIPGSLLSTPEGKSKVKQGP--GGNLVGQCGYLATGSRDKTIKIWELATGRC 338
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L Y GH D + + D K + W + I T I+ ++
Sbjct: 339 LATYIGH---DNWVRAVRFHPCGKFLLSVGDDKTIRVWDIAQGRCIKT-INEAHTHFISC 394
Query: 302 L--CSHPTRKHIMSACGNNV-KLW 322
L C H HI + ++V K+W
Sbjct: 395 LDFCLH--NPHIATGGVDDVIKVW 416
Score = 166 (63.5 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ A++ + F+ G+ +C +D IKLW+ +KT GH H V+
Sbjct: 142 RTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPS 201
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD- 125
Q+ S + DK++ +WE TG ++ H V + +ED S + S S D T+ W+
Sbjct: 202 GDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWNI 261
Query: 126 VKS------RSH-HPIQC 136
VK R H H ++C
Sbjct: 262 VKGECLATYREHSHVVEC 279
Score = 129 (50.5 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 65/286 (22%), Positives = 117/286 (40%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
GH + +N S + S + D ++ +W+ +G+ R + H + V + F++ +++
Sbjct: 104 GHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLL 163
Query: 113 ISGSQDNTVMMWD------VKS-RSH-HPIQCC-LDSKDSQIFCGSSDGKIYKWQLVDSS 163
S S D T+ +WD VK+ H H + C Q+ S D I W+
Sbjct: 164 ASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGY 223
Query: 164 QISTLI-HS--VGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEEDYGQEPIVDACFTR 218
I TL+ H V K V+ S +++C N+ +K W + E + A + R
Sbjct: 224 CIKTLVGHEDWVRKITVSEDGS------CIASCSNDQTIKTWNIVKG---ECL--ATY-R 271
Query: 219 DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK 278
+ ++ C + D G LL +G L + + GS D I
Sbjct: 272 EHSHVVECLAFSTANIID-IPGSLLSTPEGKSKVKQGPGGNLVGQCGYLATGSRDKTIKI 330
Query: 279 WQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W+L ++T I H V ++ HP K ++S + +++W
Sbjct: 331 WELATGRCLATYIGHDNW---VRAVRFHPCGKFLLSVGDDKTIRVW 373
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 194 (73.4 bits), Expect = 5.8e-13, P = 5.8e-13
Identities = 53/199 (26%), Positives = 91/199 (45%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIA 71
+G + +F+ G+ + G D+ I LWN Y + T GH+ V + D S +
Sbjct: 93 EGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSMLF 152
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
S ++DK+V +W+ TG+ V+R + H S V +C +V +GS D TV +WD++ ++
Sbjct: 153 SASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRKKA 212
Query: 131 --------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+ + + QI G D I W L + T+ SL S
Sbjct: 213 AVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSS 272
Query: 183 HPTRKHIMS-ACGNNVKLW 200
+ +++S A N V++W
Sbjct: 273 EGS--YLLSNAMDNTVRIW 289
Score = 166 (63.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 35/121 (28%), Positives = 62/121 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ GA+ + +N DGS + +DK + +W+ +K GH VN A
Sbjct: 131 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 190
Query: 68 SQ-IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
Q + +G+ D +V LW++ V+ + ++ +V V FN+ S +ISG DN + +WD+
Sbjct: 191 PQLVCTGSDDGTVKLWDIRKKAAVQTF-QNTYQVLAVTFNDTSDQIISGGIDNDIKVWDL 249
Query: 127 K 127
+
Sbjct: 250 R 250
Score = 145 (56.1 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 56/194 (28%), Positives = 91/194 (46%)
Query: 29 LTC-GSDK-KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
L C GSD +KLW+ + ++T+ + ++V T S QI SG D + +W++
Sbjct: 193 LVCTGSDDGTVKLWDIRKKAAVQTFQ-NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQ 251
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQCCL-------- 138
+ R HA VT + + + S ++S + DNTV +WDV R P + C+
Sbjct: 252 NKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDNTVRIWDV--RPFAPKERCVKIFQGNVH 309
Query: 139 DSKDSQIFCG-SSDG-KIY-----KWQLV-DSSQISTLIHSVGKA-VVNSLCSHPTRKHI 189
+ + + + C S DG KI ++ V D++ L G A VN L HP I
Sbjct: 310 NFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPII 369
Query: 190 MSACGNNVKLWTAE 203
+SA + +L+ E
Sbjct: 370 LSASSDK-RLYMGE 382
Score = 136 (52.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 28/121 (23%), Positives = 63/121 (52%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATAAC----D 66
++ + + +GSY L+ D +++W+ P+ + +K + G+ H C D
Sbjct: 264 SVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPD 323
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S+IA G++D+ V +W+ T+ + + + HA V + F+ + +++S S D + M ++
Sbjct: 324 GSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
Query: 127 K 127
+
Sbjct: 384 Q 384
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 36/122 (29%), Positives = 57/122 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ AV FN ++ G D IK+W+ +N L T GHA V + + + S + S A
Sbjct: 223 VLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAM 282
Query: 76 DKSVILWEVTTGQPVRRWRE------HASKVTCVK--FNEDSSVVISGSQDNTVMMWDVK 127
D +V +W+V P R + H + ++ ++ D S + GS D V +WD
Sbjct: 283 DNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTT 342
Query: 128 SR 129
SR
Sbjct: 343 SR 344
Score = 123 (48.4 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 41/165 (24%), Positives = 72/165 (43%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH EV + +AS D+ ++LW V + H+ V + +N D S+
Sbjct: 91 GHEGEVYCCKFHPWGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHYNTDGSM 150
Query: 112 VISGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDS-QIFC-GSSDGKIYKWQLVD 161
+ S S D TV +WD VK H + C ++ Q+ C GS DG + W +
Sbjct: 151 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 210
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLWTAEED 205
+ + T ++ V ++ + T I+S N++K+W ++
Sbjct: 211 KAAVQTFQNTYQ---VLAVTFNDTSDQIISGGIDNDIKVWDLRQN 252
>RGD|1359721 [details] [associations]
symbol:Btrc "beta-transducin repeat containing E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=IEA;ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0006470
"protein dephosphorylation" evidence=IEA;ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA;ISO]
[GO:0008013 "beta-catenin binding" evidence=IEA;ISO] [GO:0016567
"protein ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin
ligase complex" evidence=IEA;ISO] [GO:0030163 "protein catabolic
process" evidence=ISO] [GO:0031648 "protein destabilization"
evidence=IEA;ISO] [GO:0033598 "mammary gland epithelial cell
proliferation" evidence=IEA;ISO] [GO:0042753 "positive regulation
of circadian rhythm" evidence=IEA;ISO] [GO:0043122 "regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=IEA;ISO] [GO:0045309
"protein phosphorylated amino acid binding" evidence=IEA;ISO]
[GO:0045862 "positive regulation of proteolysis" evidence=IEA;ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA;ISO] [GO:0060444 "branching
involved in mammary gland duct morphogenesis" evidence=IEA;ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 CTD:8945 HOGENOM:HOG000006638 HOVERGEN:HBG002521
KO:K03362 OrthoDB:EOG4F1X2M EMBL:BC085125 IPI:IPI00951294
RefSeq:NP_001007149.2 UniGene:Rn.21800 SMR:Q5U4E5 STRING:Q5U4E5
Ensembl:ENSRNOT00000064259 GeneID:361765 KEGG:rno:361765
UCSC:RGD:1359721 InParanoid:Q5U4E5 NextBio:677539
Genevestigator:Q5U4E5 Uniprot:Q5U4E5
Length = 506
Score = 196 (74.1 bits), Expect = 6.8e-13, P = 6.8e-13
Identities = 65/234 (27%), Positives = 114/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ +T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 213 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 270
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 271 VNAGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 328
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 329 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 385
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L+
Sbjct: 386 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLM 435
Score = 183 (69.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 286 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 341
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 342 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 399
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W L+
Sbjct: 400 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLM 435
Score = 153 (58.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+WN ++T GH + A + S
Sbjct: 327 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 382
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+
Sbjct: 383 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 434
Score = 153 (58.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 200 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 257
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 258 ITGSSDSTVRVWDVNAGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 312
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 313 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 370
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 371 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 423
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 424 AYDGKIKVW 432
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/249 (22%), Positives = 101/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 194 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 251
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V G+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 252 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 309
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 310 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 369
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 370 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 424
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 425 YDGKIKVWD 433
>RGD|1309121 [details] [associations]
symbol:Fbxw11 "F-box and WD repeat domain containing 11"
species:10116 "Rattus norvegicus" [GO:0000209 "protein
polyubiquitination" evidence=ISO] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006470
"protein dephosphorylation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0019005 "SCF ubiquitin ligase
complex" evidence=ISO] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0031648 "protein destabilization" evidence=ISO] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=ISO] [GO:0042753 "positive regulation of circadian rhythm"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045862 "positive regulation
of proteolysis" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 RGD:1309121 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 IPI:IPI00368750 Ensembl:ENSRNOT00000005874
UCSC:RGD:1309121 ArrayExpress:F1M7I4 Uniprot:F1M7I4
Length = 493
Score = 195 (73.7 bits), Expect = 8.3e-13, P = 8.3e-13
Identities = 64/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ ++ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 200 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 257
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 258 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 315
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 316 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 372
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 373 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 421
Score = 171 (65.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 273 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 328
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 329 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 386
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 387 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 421
Score = 160 (61.4 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 62/247 (25%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C+++++D +ISG +DN++ +WD S H CL + I
Sbjct: 189 ENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVT 246
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 247 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 301
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 302 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 357
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 358 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 412
Query: 316 GNNVKLW 322
+K+W
Sbjct: 413 DGKIKVW 419
Score = 150 (57.9 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 314 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 369
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 370 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 423
Score = 143 (55.4 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 59/240 (24%), Positives = 99/240 (41%)
Query: 22 NVDGSYCLTCGSDK--------KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
N G YCL DK IK+W+ LK GH V D I +G
Sbjct: 190 NSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERVIVTG 247
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +WD+ S +
Sbjct: 248 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 305
Query: 131 -------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
H +D D I S D I W + TL H G A +
Sbjct: 306 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---- 361
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ R + + N ++LW E G E +V C D + I++ + D ++++D
Sbjct: 362 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGAYDGKIKVWD 420
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 192 (72.6 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 43/120 (35%), Positives = 64/120 (53%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F DG +T DK IK+W+ +R L + H + V A + D I S +
Sbjct: 137 VRSVHFCSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 196
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK+V LW+ T+ + V + EH VT V F+ + V + DNTV +WDV R+H +Q
Sbjct: 197 DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDV--RTHRLLQ 254
Score = 173 (66.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 73/306 (23%), Positives = 130/306 (42%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH V + + Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 42 LERHFKGHRDAVTCVDFSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 101
Query: 107 EDSSVVISGSQDNTVMMW--DVKS-----RSHHP-IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++ SGS+D TV +W ++K R+H ++ D Q F +SD K K
Sbjct: 102 PSGHLLASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK-- 159
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSH--PTRKHIMSACGNN-VKLW--TAEE---DYGQEP 210
V S+ + S+ + + C+ P + I+SA + VKLW T+ E Y +
Sbjct: 160 -VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 218
Query: 211 --IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ F C+ D ++++D T LL+ Y+ H + + + +
Sbjct: 219 GFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALS--FHPSGNYLV 276
Query: 269 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 327
SSD + L++ + TL G A ++ T ++ S + V +W + D
Sbjct: 277 TASSDSTLKILDLMEGRLLYTLHGHQGPAT--TVAFSRTGEYFASGGSDEQVMVWKSNFD 334
Query: 328 ---YGQ 330
YG+
Sbjct: 335 VIDYGE 340
Score = 137 (53.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 33/152 (21%), Positives = 70/152 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R +F+ DG ++ DK +KLW+ + +Y H V + +A+
Sbjct: 179 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGM 238
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
D +V +W+V T + ++ ++ H++ V + F+ + +++ S D+T+ + D+
Sbjct: 239 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 298
Query: 129 RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQ 158
H P S+ + F G SD ++ W+
Sbjct: 299 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 330
Score = 125 (49.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 5 CVQTIDCKQGA-IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
CV + C+ G + V F+ G+ G D +K+W+ + LL+ Y H+ VN +
Sbjct: 210 CVHSY-CEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 268
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ + + +SD ++ + ++ G+ + H T V F+ SG D VM+
Sbjct: 269 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 328
Query: 124 W 124
W
Sbjct: 329 W 329
>WB|WBGene00010556 [details] [associations]
symbol:rack-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0040017
"positive regulation of locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006997 "nucleus organization" evidence=IMP] [GO:0007411 "axon
guidance" evidence=IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0005813 "centrosome" evidence=IDA] [GO:0000281 "cytokinesis
after mitosis" evidence=IMP] [GO:0040038 "polar body extrusion
after meiotic divisions" evidence=IMP] [GO:0051304 "chromosome
separation" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005635 "nuclear
envelope" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IGI;IMP] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030424 "axon" evidence=IDA] [GO:0044297 "cell body"
evidence=IDA] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0005737 GO:GO:0018991
GO:GO:0040010 GO:GO:0005635 GO:GO:0005813 GO:GO:0000776
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426 GO:GO:0030334
GO:GO:0008045 GO:GO:0040035 GO:GO:0000281 GO:GO:0033365
GO:GO:0040038 GO:GO:0044297 GO:GO:0006997 GO:GO:0048675 EMBL:Z69664
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 PIR:T23309 RefSeq:NP_501859.1
ProteinModelPortal:Q21215 SMR:Q21215 DIP:DIP-26516N IntAct:Q21215
MINT:MINT-1071040 STRING:Q21215 World-2DPAGE:0020:Q21215
PaxDb:Q21215 PRIDE:Q21215 EnsemblMetazoa:K04D7.1.1
EnsemblMetazoa:K04D7.1.2 EnsemblMetazoa:K04D7.1.3
EnsemblMetazoa:K04D7.1.4 GeneID:177895 KEGG:cel:CELE_K04D7.1
UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1 InParanoid:Q21215
NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 190 (71.9 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 61/243 (25%), Positives = 111/243 (45%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ DK ++LW+ + + + + H +V + D+ QI SG+ DKS+ LW
Sbjct: 80 DGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWN 139
Query: 84 VTTGQPVRRWRE--HASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T Q + H V+ V+F+ + V++S D V +W++ + +++H
Sbjct: 140 -TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT 198
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G V+N++ P R +
Sbjct: 199 GYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL---PGNDVINAMSFSPNRYWLC 255
Query: 191 SACGNNVKLWTAEEDYGQE---P-IVDACFTRDC--QCILTCSTDECLRLFDKATGELLE 244
+A G+++K+W E+ E P I + +R QCI + + LF T ++
Sbjct: 256 AAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIR 315
Query: 245 EYK 247
Y+
Sbjct: 316 VYQ 318
Score = 140 (54.3 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 107
+++ GH H V+D + D SG+ DK++ LW++ G R++ H V V F+
Sbjct: 62 VRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSA 121
Query: 108 DSSVVISGSQDNTVMMWDVKSRSHHPI 134
D+ ++SGS+D ++ +W+ ++ + I
Sbjct: 122 DNRQIVSGSRDKSIKLWNTLAQCKYTI 148
Score = 113 (44.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 131 HHPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
+H + + S D Q GS D + W L I S K V++ S R+ +
Sbjct: 69 NHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFI-SHTKDVLSVAFSADNRQIV 127
Query: 190 MSACGNNVKLWTAEEDYGQEPIVDACFT------------RDCQCILTCSTDECLRLFDK 237
+ ++KLW + I D C T RD I++ D+ +++++
Sbjct: 128 SGSRDKSIKLWNTLAQC-KYTITDDCHTDWVSTVRFSPSNRD-PVIVSAGWDKVVKVWNL 185
Query: 238 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGK 296
L + GH +G + S D + G DG+ W L + + TL G
Sbjct: 186 GNCRLKTNHIGH-TG--YVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL---PGN 239
Query: 297 AVVNSLCSHPTRKHIMSACGNNVKLWTAEE 326
V+N++ P R + +A G+++K+W E+
Sbjct: 240 DVINAMSFSPNRYWLCAAVGSSIKIWDLED 269
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 41/163 (25%), Positives = 60/163 (36%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLK-TYGGHAHEVNDATAACDSSQ--IAS 72
+ +V F+ D ++ DK IKLWN T H V+ + + I S
Sbjct: 114 VLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVS 173
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 132
DK V +W + + H V V + D S+ SG +D M+WD+ H
Sbjct: 174 AGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 233
Query: 133 ---P----IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 168
P I S + C + I W L D +I L
Sbjct: 234 YTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEEL 276
Score = 63 (27.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 108 DSSVVISGSQDNTVMMWDVKS 128
D + V+S S+D T+++WDV S
Sbjct: 29 DKTTVLSSSRDKTILVWDVDS 49
>UNIPROTKB|Q21215 [details] [associations]
symbol:rack-1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 GO:GO:0005737
GO:GO:0018991 GO:GO:0040010 GO:GO:0005635 GO:GO:0005813
GO:GO:0000776 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040017 GO:GO:0030426
GO:GO:0030334 GO:GO:0008045 GO:GO:0040035 GO:GO:0000281
GO:GO:0033365 GO:GO:0040038 GO:GO:0044297 GO:GO:0006997
GO:GO:0048675 EMBL:Z69664 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM GeneTree:ENSGT00700000104461 PIR:T23309
RefSeq:NP_501859.1 ProteinModelPortal:Q21215 SMR:Q21215
DIP:DIP-26516N IntAct:Q21215 MINT:MINT-1071040 STRING:Q21215
World-2DPAGE:0020:Q21215 PaxDb:Q21215 PRIDE:Q21215
EnsemblMetazoa:K04D7.1.1 EnsemblMetazoa:K04D7.1.2
EnsemblMetazoa:K04D7.1.3 EnsemblMetazoa:K04D7.1.4 GeneID:177895
KEGG:cel:CELE_K04D7.1 UCSC:K04D7.1.1 CTD:177895 WormBase:K04D7.1
InParanoid:Q21215 NextBio:898836 GO:GO:0051304 Uniprot:Q21215
Length = 325
Score = 190 (71.9 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 61/243 (25%), Positives = 111/243 (45%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ DK ++LW+ + + + + H +V + D+ QI SG+ DKS+ LW
Sbjct: 80 DGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWN 139
Query: 84 VTTGQPVRRWRE--HASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T Q + H V+ V+F+ + V++S D V +W++ + +++H
Sbjct: 140 -TLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHT 198
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
+ S D + G DG+ W L + + TL G V+N++ P R +
Sbjct: 199 GYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL---PGNDVINAMSFSPNRYWLC 255
Query: 191 SACGNNVKLWTAEEDYGQE---P-IVDACFTRDC--QCILTCSTDECLRLFDKATGELLE 244
+A G+++K+W E+ E P I + +R QCI + + LF T ++
Sbjct: 256 AAVGSSIKIWDLEDKKEIEELKPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIR 315
Query: 245 EYK 247
Y+
Sbjct: 316 VYQ 318
Score = 140 (54.3 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 25/87 (28%), Positives = 49/87 (56%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 107
+++ GH H V+D + D SG+ DK++ LW++ G R++ H V V F+
Sbjct: 62 VRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSA 121
Query: 108 DSSVVISGSQDNTVMMWDVKSRSHHPI 134
D+ ++SGS+D ++ +W+ ++ + I
Sbjct: 122 DNRQIVSGSRDKSIKLWNTLAQCKYTI 148
Score = 113 (44.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 49/210 (23%), Positives = 86/210 (40%)
Query: 131 HHPIQCCLDSKDSQI-FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
+H + + S D Q GS D + W L I S K V++ S R+ +
Sbjct: 69 NHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFI-SHTKDVLSVAFSADNRQIV 127
Query: 190 MSACGNNVKLWTAEEDYGQEPIVDACFT------------RDCQCILTCSTDECLRLFDK 237
+ ++KLW + I D C T RD I++ D+ +++++
Sbjct: 128 SGSRDKSIKLWNTLAQC-KYTITDDCHTDWVSTVRFSPSNRD-PVIVSAGWDKVVKVWNL 185
Query: 238 ATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGK 296
L + GH +G + S D + G DG+ W L + + TL G
Sbjct: 186 GNCRLKTNHIGH-TG--YVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL---PGN 239
Query: 297 AVVNSLCSHPTRKHIMSACGNNVKLWTAEE 326
V+N++ P R + +A G+++K+W E+
Sbjct: 240 DVINAMSFSPNRYWLCAAVGSSIKIWDLED 269
Score = 112 (44.5 bits), Expect = 0.00098, P = 0.00098
Identities = 41/163 (25%), Positives = 60/163 (36%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLK-TYGGHAHEVNDATAACDSSQ--IAS 72
+ +V F+ D ++ DK IKLWN T H V+ + + I S
Sbjct: 114 VLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRFSPSNRDPVIVS 173
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 132
DK V +W + + H V V + D S+ SG +D M+WD+ H
Sbjct: 174 AGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 233
Query: 133 ---P----IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 168
P I S + C + I W L D +I L
Sbjct: 234 YTLPGNDVINAMSFSPNRYWLCAAVGSSIKIWDLEDKKEIEEL 276
Score = 63 (27.2 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 108 DSSVVISGSQDNTVMMWDVKS 128
D + V+S S+D T+++WDV S
Sbjct: 29 DKTTVLSSSRDKTILVWDVDS 49
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 197 (74.4 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 61/207 (29%), Positives = 92/207 (44%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F + + L+C D I+LW+ + TY GH + V D A S
Sbjct: 451 GPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSC 510
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD-VKSRSHH 132
+ DK+ LW + Q +R + H S V CV+F+ +S+ V +GS D TV +WD + +S
Sbjct: 511 SYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVR 570
Query: 133 PIQCCLDSKDSQIF--CG------SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ S S F CG S D I W L + S ++TL+ +
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDG 630
Query: 185 TRKHIMSACG--NNVKLWT---AEEDY 206
T +++A G NN+ LW EDY
Sbjct: 631 T---VLAAAGLDNNLTLWDFHKVTEDY 654
Score = 191 (72.3 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 41/130 (31%), Positives = 70/130 (53%)
Query: 1 MEYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVND 60
+ ++CV T + VRF G Y ++C DK +LW N L+ + GH +V+
Sbjct: 480 LTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDC 539
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT 120
+S+ +A+G+SD++V LW+ TGQ VR H V+ + F+ + SGS D+
Sbjct: 540 VQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHN 599
Query: 121 VMMWDVKSRS 130
+++WD+ + S
Sbjct: 600 IIIWDLSNGS 609
Score = 137 (53.3 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 66/291 (22%), Positives = 112/291 (38%)
Query: 54 HAHE-VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
++H+ V A + DS+ +A G D SV +W +T + +R ++ S K + D +V
Sbjct: 375 NSHQGVTCAEISDDSTMLACGFGDSSVRIWSLTPAK-LRTLKDADSLRELDKESADINVR 433
Query: 113 ISGSQDNTVMMWDVKSRSHH--PIQCCLDSKDSQIFCG-SSDGKIYKWQLVDSSQISTLI 169
+ + V +S H P+ C + + + S D I W L+ S + T
Sbjct: 434 MLDDRSGEV----TRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYR 489
Query: 170 HSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDC-------QC 222
V H + + +LW + + V DC
Sbjct: 490 GHVYPVWDVRFAPHGYY-FVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNY 548
Query: 223 ILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
+ T S+D +RL+D TG+ + GHK + + + GS D I W L
Sbjct: 549 VATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSL--AFSACGRYLASGSVDHNIIIWDLS 606
Query: 283 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWT---AEEDY 328
+ S ++TL+ + T +++A G NN+ LW EDY
Sbjct: 607 NGSLVTTLLRHTSTVTTITFSRDGT---VLAAAGLDNNLTLWDFHKVTEDY 654
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 196 (74.1 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 55/222 (24%), Positives = 94/222 (42%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATA 63
++T+ G + F D S L+C D ++ W+ + N +L Y GHA+ V D
Sbjct: 347 IKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRYWDLKSFTNTVL--YRGHAYPVWDVDV 404
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ S ++ + D++ LW P+R + H S V CVKF+ +S+ + +GS D TV +
Sbjct: 405 SPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRL 464
Query: 124 WDVKSRS-------HH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGK 174
W + + H P+ S + + + D ++ W L L
Sbjct: 465 WSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTD- 523
Query: 175 AVVNSLCSHPTRKHIMSAC-GNNVKLWTAEEDYGQEPIVDAC 215
++SL + SA N V++W +G P D C
Sbjct: 524 -TISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAP-TDGC 563
Score = 182 (69.1 bits), Expect = 3.8e-11, P = 3.8e-11
Identities = 37/136 (27%), Positives = 71/136 (52%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V+F+ + +Y T +DK ++LW+ + ++ + GH V + + +AS
Sbjct: 441 VDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASAGE 500
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPI 134
D+ + LW++ +G + R H ++ + F++DSS+V S S DNTV +WD+++ P
Sbjct: 501 DQRLKLWDLASGGLFKDLRGHTDTISSLSFSQDSSLVASASMDNTVRVWDIRNAHGSAPT 560
Query: 135 QCCLDSKDSQIFCGSS 150
C Q + GS+
Sbjct: 561 DGCSSELIGQ-YTGST 575
Score = 165 (63.1 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 70/296 (23%), Positives = 127/296 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATA 63
C + + + D S L G D +KLW+ R LK G H +V+
Sbjct: 272 CFYAFQHTEQLLNTAEVSAD-SRLLAAGFDNSAVKLWS-LRARKLKA-GPHKADVSKIRL 328
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
ACD + A D E +G ++ R H+ V F D+S ++S S+D+TV
Sbjct: 329 ACDV--LEEEADD------EDASGSEIKTLRGHSGPVYRTAFLTDASGLLSCSEDSTVRY 380
Query: 124 WDVKS-------RSH-HPIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGK 174
WD+KS R H +P+ S S F +S + + W + + +++
Sbjct: 381 WDLKSFTNTVLYRGHAYPVWDVDVSPCSLYFSTASHDRTARLWSFARTYPLR--LYAGHL 438
Query: 175 AVVNSLCSHPTRKHIMS-ACGNNVKLWTAEEDYG-------QEPIVDACFTRDCQCILTC 226
+ V+ + HP +I + + V+LW+ + + P++ F+ + + + +
Sbjct: 439 SDVDCVKFHPNSNYIATGSTDKTVRLWSTRQGASVRLFTGHRGPVLTLAFSPNGKYLASA 498
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 281
D+ L+L+D A+G L ++ +GH I S+DS + +S D + W +
Sbjct: 499 GEDQRLKLWDLASGGLFKDLRGHTD---TISSLSFSQDSSLVASASMDNTVRVWDI 551
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 193 (73.0 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 74/297 (24%), Positives = 123/297 (41%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
AI ++ F+ G + D + +WN + GH V + + +AS +
Sbjct: 20 AITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFSPSAHLLASSS 79
Query: 75 SDKSVILWEVTT-GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS----- 128
DK+V LW + G+ V +R H V V F+ D +++ S D ++ +W V
Sbjct: 80 RDKTVRLWVPSVKGESVL-FRAHTGSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIIC 138
Query: 129 --RSHHP-IQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHP 184
R H+ ++C S D Q+ SD + K W I T G + + + HP
Sbjct: 139 TLREHNNWVRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYS--SYVDFHP 196
Query: 185 TRKHIMSACGNN-VKLW-----TAEEDYG-QEPIVDAC-FTRDCQCILTCSTDECLRLFD 236
+ I +A +N V++W T + Y V+A F +LT S+D L++ D
Sbjct: 197 SSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSDSTLKILD 256
Query: 237 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGS-SDGKIYKWQL-VDSSQISTLI 291
G LL GH+ C S+ F + SD ++ W+ DS S ++
Sbjct: 257 LLEGRLLYTLHGHQGS---ASCVSFSRSGDQFASAGSDQQVMVWRTNFDSVDYSRVL 310
Score = 184 (69.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 50/201 (24%), Positives = 91/201 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G++R+V F+ DG LT D+ IKLW+ +R ++ T H + V A + D + S
Sbjct: 103 GSVRSVCFSADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSV 162
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+ D++V LW+ ++ Q + + E + V F+ S+ + + S DNTV +WD+++ +
Sbjct: 163 SDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQ 222
Query: 131 HHPIQCC------LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
H+ + + + SSD + L++ + TL G A S S
Sbjct: 223 HYQVHSAAVNALSFHPSGNHLLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSF-SRS 281
Query: 185 TRKHIMSACGNNVKLWTAEED 205
+ + V +W D
Sbjct: 282 GDQFASAGSDQQVMVWRTNFD 302
Score = 178 (67.7 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 75/301 (24%), Positives = 119/301 (39%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH + + QIASG+ D SV++W + R+ H VTCV+F+
Sbjct: 10 LERNFKGHRDAITSLDFSPSGKQIASGSVDASVMVWNMKPQSRAYRFTGHKDAVTCVQFS 69
Query: 107 EDSSVVISGSQDNTVMMW--DVKS-----RSHH-PIQCCLDSKDSQ-IFCGSSDGKIYKW 157
+ ++ S S+D TV +W VK R+H ++ S D Q + S D I W
Sbjct: 70 PSAHLLASSSRDKTVRLWVPSVKGESVLFRAHTGSVRSVCFSADGQSLLTASDDQSIKLW 129
Query: 158 QLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDAC- 215
+ I TL V P + ++S + VKLW A ++ I C
Sbjct: 130 SVHRQKIICTLREH--NNWVRCARFSPDGQLMVSVSDDRTVKLWDASS---RQLIHTFCE 184
Query: 216 ---------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ 266
F CI T S+D +R++D T LL+ Y+ H + + +
Sbjct: 185 PGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHSAAVNALS--FHPSGNH 242
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 326
+ SSD + L++ + TL G A S S + + V +W
Sbjct: 243 LLTASSDSTLKILDLLEGRLLYTLHGHQGSASCVSF-SRSGDQFASAGSDQQVMVWRTNF 301
Query: 327 D 327
D
Sbjct: 302 D 302
>UNIPROTKB|F1M373 [details] [associations]
symbol:Fbxw11 "Protein Fbxw11" species:10116 "Rattus
norvegicus" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1309121 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813 GO:GO:0045892
GO:GO:0045893 GO:GO:0006470 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842
GO:GO:0045862 GO:GO:0000209 GO:GO:0031648 GO:GO:0042347
GO:GO:0031146 GO:GO:0042753 IPI:IPI00870648
Ensembl:ENSRNOT00000006078 ArrayExpress:F1M373 Uniprot:F1M373
Length = 527
Score = 195 (73.7 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 64/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ ++ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 234 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 291
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 292 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 349
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 350 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 406
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 407 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 455
Score = 171 (65.3 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 307 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 362
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 363 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 420
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 421 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 455
Score = 160 (61.4 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 62/247 (25%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C+++++D +ISG +DN++ +WD S H CL + I
Sbjct: 223 ENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVT 280
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 281 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 335
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 336 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 391
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 392 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 446
Query: 316 GNNVKLW 322
+K+W
Sbjct: 447 DGKIKVW 453
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 348 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 403
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 457
Score = 143 (55.4 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 59/240 (24%), Positives = 99/240 (41%)
Query: 22 NVDGSYCLTCGSDK--------KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
N G YCL DK IK+W+ LK GH V D I +G
Sbjct: 224 NSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERVIVTG 281
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +WD+ S +
Sbjct: 282 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 339
Query: 131 -------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
H +D D I S D I W + TL H G A +
Sbjct: 340 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---- 395
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ R + + N ++LW E G E +V C D + I++ + D ++++D
Sbjct: 396 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGAYDGKIKVWD 454
>ZFIN|ZDB-GENE-030131-6305 [details] [associations]
symbol:fbxw11a "F-box and WD-40 domain protein
11a" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
ZFIN:ZDB-GENE-030131-6305 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OrthoDB:EOG4F1X2M
HSSP:Q9Y297 GeneTree:ENSGT00690000101849 EMBL:CABZ01001943
EMBL:CABZ01001944 EMBL:CABZ01001945 EMBL:CABZ01001946 EMBL:BC045356
IPI:IPI00502564 RefSeq:NP_958467.1 UniGene:Dr.78612 SMR:Q7ZVZ1
STRING:Q7ZVZ1 Ensembl:ENSDART00000036901 GeneID:334373
KEGG:dre:334373 CTD:334373 OMA:MESQINT NextBio:20810369
Uniprot:Q7ZVZ1
Length = 527
Score = 195 (73.7 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 65/233 (27%), Positives = 114/233 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ + + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 234 DDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 291
Query: 126 VKSRS------HHPIQCCLDSK---DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V S HH + L + + C S D I W + ++ IS VG +A
Sbjct: 292 VSSGEVLNTLIHHN-EAVLHLRFCNGLMVTC-SKDRSIAVWDMASATDISLRRVLVGHRA 349
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 350 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 406
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 407 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 455
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 348 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 403
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 404 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 457
Score = 137 (53.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 58/240 (24%), Positives = 99/240 (41%)
Query: 22 NVDGSYCLTCGSDK--------KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
N G YCL DK IK+W+ LK GH V D I +G
Sbjct: 224 NSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHTGSV--LCLQYDERVIVTG 281
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+SD +V +W+V++G+ + H V ++F + ++++ S+D ++ +WD+ S +
Sbjct: 282 SSDSTVRVWDVSSGEVLNTLIHHNEAVLHLRFC--NGLMVTCSKDRSIAVWDMASATDIS 339
Query: 131 -------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
H +D D I S D I W + TL H G A +
Sbjct: 340 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---- 395
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ R + + N ++LW E G E +V C D + I++ + D ++++D
Sbjct: 396 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGAYDGKIKVWD 454
>MGI|MGI:1338871 [details] [associations]
symbol:Btrc "beta-transducin repeat containing protein"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006470 "protein dephosphorylation"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008013 "beta-catenin binding"
evidence=IDA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0031648
"protein destabilization" evidence=ISO] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IMP]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IDA] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IMP] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IMP] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IDA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
UniPathway:UPA00143 MGI:MGI:1338871 GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH466534 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511
GO:GO:0019005 GO:GO:0004842 GO:GO:0045862 GO:GO:0008013
GO:GO:0000209 GO:GO:0071407 GO:GO:0045309 Reactome:REACT_109335
Reactome:REACT_24972 GO:GO:0061136 GO:GO:0031648 GO:GO:0043122
GO:GO:0060444 GO:GO:0033598 GO:GO:0042753 CTD:8945
HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362 OMA:NAYLKPM
OrthoDB:EOG4F1X2M EMBL:AF099932 EMBL:AF110396 EMBL:AF112979
EMBL:AF081887 EMBL:AF391190 EMBL:AF391178 EMBL:AF391179
EMBL:AF391180 EMBL:AF391181 EMBL:AF391182 EMBL:AF391183
EMBL:AF391184 EMBL:AF391185 EMBL:AF391186 EMBL:AF391187
EMBL:AF391188 EMBL:AF391189 EMBL:AK145624 EMBL:AK156660
EMBL:AK220183 EMBL:BC003989 IPI:IPI00402788 IPI:IPI00877195
RefSeq:NP_001032847.2 RefSeq:NP_033901.1 UniGene:Mm.119717
UniGene:Mm.446448 HSSP:Q9Y297 ProteinModelPortal:Q3ULA2 SMR:Q3ULA2
IntAct:Q3ULA2 STRING:Q3ULA2 PhosphoSite:Q3ULA2
Ensembl:ENSMUST00000065601 Ensembl:ENSMUST00000111936 GeneID:12234
KEGG:mmu:12234 UCSC:uc008hqy.2 UCSC:uc008hqz.2
GeneTree:ENSGT00690000101849 InParanoid:Q571K6 NextBio:280656
Bgee:Q3ULA2 Genevestigator:Q3ULA2 Uniprot:Q3ULA2
Length = 605
Score = 196 (74.1 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 65/234 (27%), Positives = 114/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ +T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 370 VNAGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 484
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L+
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLM 534
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 385 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 440
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 498
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W L+
Sbjct: 499 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLM 534
Score = 153 (58.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+WN ++T GH + A + S
Sbjct: 426 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 481
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 153 (58.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 299 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 356
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 411
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 469
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 470 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 522
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 523 AYDGKIKVW 531
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/249 (22%), Positives = 101/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 350
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V G+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 408
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 468
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 469 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 523
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 524 YDGKIKVWD 532
>UNIPROTKB|F1LMH8 [details] [associations]
symbol:Btrc "Protein Btrc" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0019005 "SCF
ubiquitin ligase complex" evidence=IEA] [GO:0031648 "protein
destabilization" evidence=IEA] [GO:0033598 "mammary gland
epithelial cell proliferation" evidence=IEA] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IEA] [GO:0043122
"regulation of I-kappaB kinase/NF-kappaB cascade" evidence=IEA]
[GO:0045309 "protein phosphorylated amino acid binding"
evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051726 "regulation of
cell cycle" evidence=IEA] [GO:0060444 "branching involved in
mammary gland duct morphogenesis" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0071407 "cellular response to organic cyclic compound"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
RGD:1359721 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0051726 GO:GO:0006511 GO:GO:0019005
GO:GO:0045862 GO:GO:0000209 GO:GO:0071407 GO:GO:0061136
GO:GO:0031648 GO:GO:0043122 GO:GO:0060444 GO:GO:0033598
GO:GO:0042753 GeneTree:ENSGT00690000101849 IPI:IPI00372531
PRIDE:F1LMH8 Ensembl:ENSRNOT00000022426 ArrayExpress:F1LMH8
Uniprot:F1LMH8
Length = 605
Score = 196 (74.1 bits), Expect = 9.6e-13, P = 9.6e-13
Identities = 65/234 (27%), Positives = 114/234 (48%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ +T + R H V C++++E V+I+GS D+TV +WD
Sbjct: 312 DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDE--RVIITGSSDSTVRVWD 369
Query: 126 VKSRS------HHPIQCCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + + C S D I W + + I+ VG +A
Sbjct: 370 VNAGEMLNTLIHH-CEAVLHLRFNNGMMVTC-SKDRSIAVWDMASPTDITLRRVLVGHRA 427
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 428 AVNVVDFDD--KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 484
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLV 282
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L+
Sbjct: 485 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDLM 534
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 44/156 (28%), Positives = 75/156 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 385 AVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN--VVDFDDKYIV 440
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 441 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 498
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ + +I G+ DGKI W L+
Sbjct: 499 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLM 534
Score = 153 (58.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 32/114 (28%), Positives = 57/114 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+WN ++T GH + A + S
Sbjct: 426 RAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 481
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+
Sbjct: 482 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDL 533
Score = 153 (58.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 62/249 (24%), Positives = 107/249 (42%)
Query: 94 REHASK-VTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQI 145
R SK V C+++ D ++SG +DNT+ +WD + H CL + I
Sbjct: 299 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVI 356
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--T 201
GSSD + W + ++TLIH +AV++ ++ +M C + + +W
Sbjct: 357 ITGSSDSTVRVWDVNAGEMLNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMA 411
Query: 202 AEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDF 254
+ D G V+ D + I++ S D +++++ +T E + GHK G
Sbjct: 412 SPTDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGI- 469
Query: 255 RIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS- 313
CL +D + GSSD I W + + + L + +V C K I+S
Sbjct: 470 ---ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSG 522
Query: 314 ACGNNVKLW 322
A +K+W
Sbjct: 523 AYDGKIKVW 531
Score = 132 (51.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 56/249 (22%), Positives = 101/249 (40%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ + GH V
Sbjct: 293 LQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSV--LCLQ 350
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D I +G+SD +V +W+V G+ + H V ++FN + ++++ S+D ++ +W
Sbjct: 351 YDERVIITGSSDSTVRVWDVNAGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 408
Query: 125 DVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
D+ S + H +D D I S D I W + TL H G
Sbjct: 409 DMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 468
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCS 227
A + + R + + N ++LW E G E +V C D + I++ +
Sbjct: 469 IACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGA 523
Query: 228 TDECLRLFD 236
D ++++D
Sbjct: 524 YDGKIKVWD 532
>MGI|MGI:2144023 [details] [associations]
symbol:Fbxw11 "F-box and WD-40 domain protein 11"
species:10090 "Mus musculus" [GO:0000209 "protein
polyubiquitination" evidence=ISO;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006470
"protein dephosphorylation" evidence=IDA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;IDA]
[GO:0031146 "SCF-dependent proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;IMP] [GO:0031648 "protein
destabilization" evidence=ISO] [GO:0042347 "negative regulation of
NF-kappaB import into nucleus" evidence=IMP] [GO:0042753 "positive
regulation of circadian rhythm" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
MGI:MGI:2144023 GO:GO:0005829 GO:GO:0005634 GO:GO:0005813
GO:GO:0045892 GO:GO:0045893 GO:GO:0006470 GO:GO:0016055
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0048511 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0019005
GO:GO:0004842 GO:GO:0045862 GO:GO:0000209 GO:GO:0031648
GO:GO:0042347 GO:GO:0031146 EMBL:AL669951 GO:GO:0042753
EMBL:AL669844 HOGENOM:HOG000006638 HOVERGEN:HBG002521 KO:K03362
OrthoDB:EOG4F1X2M GeneTree:ENSGT00690000101849 CTD:23291
OMA:FDQWSEA EMBL:AY038079 EMBL:AK041532 EMBL:AK149139 EMBL:AK152181
EMBL:AK160086 EMBL:AK166226 EMBL:AK168667 EMBL:BC034261
IPI:IPI00473301 IPI:IPI00474016 IPI:IPI00515142 IPI:IPI00969335
RefSeq:NP_001258276.1 RefSeq:NP_001258277.1 RefSeq:NP_001258278.1
RefSeq:NP_598776.1 UniGene:Mm.28017 UniGene:Mm.474118
ProteinModelPortal:Q5SRY7 SMR:Q5SRY7 DIP:DIP-59921N STRING:Q5SRY7
PhosphoSite:Q5SRY7 PRIDE:Q5SRY7 Ensembl:ENSMUST00000076383
Ensembl:ENSMUST00000093205 Ensembl:ENSMUST00000109366 GeneID:103583
KEGG:mmu:103583 UCSC:uc007ijx.1 UCSC:uc007ijy.1 UCSC:uc007ijz.1
UCSC:uc007ika.1 InParanoid:Q923H0 ChiTaRS:FBXW11 NextBio:356027
Bgee:Q5SRY7 Genevestigator:Q5SRY7 Uniprot:Q5SRY7
Length = 542
Score = 195 (73.7 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 64/233 (27%), Positives = 116/233 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D S+ +W+ ++ + ++ H V C++++E V+++GS D+TV +WD
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVRVWD 306
Query: 126 VKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V + HH + L + S + C S D I W + ++ I+ VG +A
Sbjct: 307 VNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASATDITLRRVLVGHRA 364
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCST 228
VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S+
Sbjct: 365 AVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGSS 421
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 422 DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 470
Score = 171 (65.3 bits), Expect = 5.7e-10, P = 5.7e-10
Identities = 42/155 (27%), Positives = 75/155 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK-TYGGHAHEVNDATAACDSSQIA 71
A+ +RF+ +TC D+ I +W+ ++ L+ GH VN D I
Sbjct: 322 AVLHLRFS--NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVN--VVDFDDKYIV 377
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DNT+ +WD++
Sbjct: 378 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGAC 435
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQL 159
H + C+ + +I G+ DGKI W L
Sbjct: 436 LRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDL 470
Score = 160 (61.4 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 62/247 (25%), Positives = 108/247 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSKDSQIFC 147
E++ V C+++++D +ISG +DN++ +WD S H CL + I
Sbjct: 238 ENSKGVYCLQYDDDK--IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYDERVIVT 295
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ S+ +M C + + +W +
Sbjct: 296 GSSDSTVRVWDVNTGEVLNTLIHH-NEAVLHLRFSNG----LMVTCSKDRSIAVWDMASA 350
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
D G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 351 TDITLRRVLVGHRAAVNVVDFDD-KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 406
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-AC 315
CL +D + GSSD I W + + + L + +V C K I+S A
Sbjct: 407 -ACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVR--CIRFDNKRIVSGAY 461
Query: 316 GNNVKLW 322
+K+W
Sbjct: 462 DGKIKVW 468
Score = 150 (57.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 363 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 418
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 419 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 472
Score = 143 (55.4 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 59/240 (24%), Positives = 99/240 (41%)
Query: 22 NVDGSYCLTCGSDK--------KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
N G YCL DK IK+W+ LK GH V D I +G
Sbjct: 239 NSKGVYCLQYDDDKIISGLRDNSIKIWDKSSLECLKVLTGHTGSV--LCLQYDERVIVTG 296
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +WD+ S +
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAVWDMASATDIT 354
Query: 131 -------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
H +D D I S D I W + TL H G A +
Sbjct: 355 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---- 410
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ R + + N ++LW E G E +V C D + I++ + D ++++D
Sbjct: 411 YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSGAYDGKIKVWD 469
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 194 (73.4 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 46/162 (28%), Positives = 76/162 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F+ DG +T DK IK+W+ +R L + H H V A + D I S +
Sbjct: 105 VRSVDFSADGQLLVTASEDKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSE 164
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---HH 132
DK++ +W+ T Q V + + V FN + + + S D+ V +WD++ H+
Sbjct: 165 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHY 224
Query: 133 PIQ-C---CLDSKD--SQIFCGSSDGKIYKWQLVDSSQISTL 168
+ C CL + + SSDG + L++ I TL
Sbjct: 225 QVHSCGVNCLSFHPLGNSLVTASSDGTVKMLDLIEGRLIYTL 266
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 61/264 (23%), Positives = 113/264 (42%)
Query: 46 LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF 105
+L +++ GH + A + + QIA+ + D ++LW + R+ H VT ++F
Sbjct: 9 ILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQF 68
Query: 106 NEDSSVVISGSQDNTVMMW--DVKSRSH----H--PIQCCLDSKDSQIFCGSSDGKIYK- 156
+ +++ S S+D TV +W D K +S H P++ S D Q+ +S+ K K
Sbjct: 69 SPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASEDKSIKV 128
Query: 157 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEEDYGQEPIVDA 214
W + + +L V P + I+S C + +K+W D+
Sbjct: 129 WSMFRQRFLYSLYRHTHW--VRCAKFSPDGRLIVS-CSEDKTIKIWDTTNKQCVNNFSDS 185
Query: 215 C-------FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC-LDSKDSQ 266
F + CI + +D ++++D +LL+ Y+ H G + C +
Sbjct: 186 VGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCG---VNCLSFHPLGNS 242
Query: 267 IFCGSSDGKIYKWQLVDSSQISTL 290
+ SSDG + L++ I TL
Sbjct: 243 LVTASSDGTVKMLDLIEGRLIYTL 266
Score = 148 (57.2 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 45/197 (22%), Positives = 84/197 (42%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ +++F+ G+ + D+ ++LW R + H V + D + + +
Sbjct: 63 VTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE 122
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DKS+ +W + + + H V C KF+ D +++S S+D T+ +WD ++ Q
Sbjct: 123 DKSIKVWSMFRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNK-----Q 177
Query: 136 CCLDSKDSQIF-----------CGSSDGKIYKWQLVDSSQISTLIH-SVGKAVVNSLCSH 183
C + DS F C +S G + ++ D L H V VN L H
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFH 237
Query: 184 PTRKHIMSACGNN-VKL 199
P +++A + VK+
Sbjct: 238 PLGNSLVTASSDGTVKM 254
Score = 143 (55.4 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV G V FN +G+ + GSD +K+W+ N LL+ Y H+ VN +
Sbjct: 178 CVNNFSDSVGFANFVDFNPNGTCIASAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSFH 237
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ + + +SD +V + ++ G+ + + H V V F++D ++ SG D V++W
Sbjct: 238 PLGNSLVTASSDGTVKMLDLIEGRLIYTLQGHTGPVFTVSFSKDGELLTSGGADAQVLIW 297
>UNIPROTKB|F1NAZ4 [details] [associations]
symbol:MLST8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030838 "positive regulation of actin filament
polymerization" evidence=IEA] [GO:0032008 "positive regulation of
TOR signaling cascade" evidence=IEA] [GO:0032314 "regulation of Rac
GTPase activity" evidence=IEA] [GO:0050731 "positive regulation of
peptidyl-tyrosine phosphorylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0050731 GO:GO:0030838
GO:GO:0032314 GO:GO:0032008 GeneTree:ENSGT00390000014795
OMA:NNKGNCY EMBL:AADN02023651 IPI:IPI00592090
Ensembl:ENSGALT00000009446 Uniprot:F1NAZ4
Length = 327
Score = 146 (56.5 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 45/193 (23%), Positives = 83/193 (43%)
Query: 30 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 89
T G D ++ W + + +T +VN D S IA+ A + + ++++ + P
Sbjct: 18 TAGYDHTVRFWQAHSGICTRTVQHQDSQVNALEITPDRSMIAA-AGYQHIRMYDLNSNNP 76
Query: 90 --VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---------HHPIQC-C 137
V + + +T V F+ED + +G +D +WD++SR+ + PI C C
Sbjct: 77 NPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVC 136
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNN 196
L +++ G G I+ W L + LI + VNS+ P ++ + N
Sbjct: 137 LHPNQAELIVGDQSGAIHIWDL-KTDHNEQLIPEP-EVSVNSVHIDPDASYMAAVNSSGN 194
Query: 197 VKLWTAEEDYGQE 209
+W G+E
Sbjct: 195 CYVWNLTGGIGEE 207
Score = 90 (36.7 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 33/162 (20%), Positives = 68/162 (41%)
Query: 62 TAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
T D +A+ D +V W+ +G R + S+V ++ D S++ + + +
Sbjct: 8 TVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNALEITPDRSMIAAAGYQH-I 66
Query: 122 MMWDVKSRSHHPI------QCCLDS----KDSQ-IFCGSSDGKIYKWQLVDSSQISTLIH 170
M+D+ S + +P+ + S +D + ++ G D W L + I
Sbjct: 67 RMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIF 126
Query: 171 SVGKAVVNSLCSHPTRKH-IMSACGNNVKLWTAEEDYGQEPI 211
V A +N +C HP + I+ + +W + D+ ++ I
Sbjct: 127 QVN-APINCVCLHPNQAELIVGDQSGAIHIWDLKTDHNEQLI 167
Score = 87 (35.7 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 213 DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
D F+ D Q I+T S+D RL+ TGE+ EY GH+ + CL DS
Sbjct: 276 DCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQ----KAVVCLAFNDS 324
Score = 73 (30.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/112 (19%), Positives = 48/112 (42%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWN-PYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
I +V F+ DG + T G D ++W+ RNL + +N + +++ G
Sbjct: 89 ITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGD 148
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
++ +W++ T + E V V + D+S + + + +W++
Sbjct: 149 QSGAIHIWDLKTDHNEQLIPEPEVSVNSVHIDPDASYMAAVNSSGNCYVWNL 200
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 195 (73.7 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 56/199 (28%), Positives = 90/199 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
G + + RF D S L+C D I+ W+ + N +L Y GHA+ V D + S A
Sbjct: 343 GPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDVDISPFSLYFA 400
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
SG+ D++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W + +
Sbjct: 401 SGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNS 460
Query: 131 ------HH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H P+ S + + + D ++ W L + L + SL
Sbjct: 461 VRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDS--ITSLAF 518
Query: 183 HPTRKHIMSAC-GNNVKLW 200
P I SA N+V++W
Sbjct: 519 SPDSGLIASASMDNSVRVW 537
Score = 179 (68.1 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 31/113 (27%), Positives = 63/113 (55%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V+F+ + +Y T +DK ++LW+ + ++ + GH V + + + +AS
Sbjct: 429 VDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGE 488
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
D+ + LW++ +G + R H +T + F+ DS ++ S S DN+V +WD++S
Sbjct: 489 DQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541
Score = 159 (61.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 68/275 (24%), Positives = 119/275 (43%)
Query: 26 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
S L G D IKLW+ R+ LK+ H + + ACD+ + D
Sbjct: 280 SKLLAAGFDNSCIKLWS-LRSKKLKSEPHHV-DTSRIRLACDTLEEEENEEDN------- 330
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQC 136
TG ++ R H V +F DSS ++S S+D ++ WD+ S + H +P+
Sbjct: 331 -TGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 389
Query: 137 CLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACG 194
S S F GS D W + + I++ A V+ + HP ++ + +
Sbjct: 390 VDISPFSLYFASGSHDRTARLWSFDRTYPLR--IYAGHLADVDCVKFHPNSNYLATGSTD 447
Query: 195 NNVKLWTAEEDYG-------QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 247
V+LW+A++ + P++ F+ + + + + D+ L+L+D A+G L +E +
Sbjct: 448 KTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR 507
Query: 248 GHKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 281
GH I S DS + +S D + W +
Sbjct: 508 GHTDS---ITSLAFSPDSGLIASASMDNSVRVWDI 539
Score = 123 (48.4 bits), Expect = 0.00015, P = 0.00015
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G + ++ F+ +G Y + G D+++KLW+ L K GH + + DS IAS
Sbjct: 468 RGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIAS 527
Query: 73 GASDKSVILWEV-----------TTGQPVRRWREHASKVTCVKFNEDSSVVISG-SQDN 119
+ D SV +W++ ++G+ V + S V V+F + ++++G +Q+N
Sbjct: 528 ASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQEN 586
>ZFIN|ZDB-GENE-000616-4 [details] [associations]
symbol:apaf1 "apoptotic protease activating factor 1"
species:7955 "Danio rerio" [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0006952 "defense response" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00114 SMART:SM00320 ZFIN:ZDB-GENE-000616-4 GO:GO:0006952
GO:GO:0042981 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043531
GO:GO:0005622 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
InterPro:IPR017251 PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017
EMBL:CT868708 EMBL:CT025647 IPI:IPI00996819
Ensembl:ENSDART00000127261 Uniprot:E7F2V1
Length = 1264
Score = 199 (75.1 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 78/329 (23%), Positives = 139/329 (42%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWN-PYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
++ ++ DGS + C + + +++ +LLL+ + A +SS +A
Sbjct: 804 VKCSTWSADGSQII-CAARNTVFVFDVETSDLLLELKTSRLSTIQFCHACPNSSLLAVAL 862
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPI 134
S +V LW + + H S V CV+F+ D S+++S S D T+ +W+ R H
Sbjct: 863 SHYTVELWNFESSKKKAECSGHLSWVHCVQFSPDGSLLLSSSDDQTIRLWET-DRVHTSS 921
Query: 135 QCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS-------LCSHPTRK 187
L +D+ + SD I S+++ L S G V+ S CS +R
Sbjct: 922 AVAL-KRDTDVLFSHSDATIIAPD--SSNRLQVLSGSTGAVVLESEELSSRIRCSCISRN 978
Query: 188 HIMSACGNN------VKLWTAEEDY---GQEPIVDAC-FTRDCQCILTCSTDECLRLFDK 237
A G+ +++ +++ G V C FT DC+ ++T S D +R+ K
Sbjct: 979 AAFVALGSEDGTVQVIEVPSSKASVKLSGHTKTVHHCQFTDDCEILITSSEDSTIRVVWK 1038
Query: 238 -ATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 296
TGE + +GH + S ++F S DG + W L + L+ G
Sbjct: 1039 WRTGECMV-LQGHMEPVRKFHLLSSSSSPRLFSWSFDGTVKVWDLTRGQMLQDLVCHEG- 1096
Query: 297 AVVNSLCSHPTRKHIMSACGNNVK-LWTA 324
AV++ S R ++ K +W++
Sbjct: 1097 AVLSCDVSSDGRLFATTSANRTAKKVWSS 1125
Score = 157 (60.3 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 80/349 (22%), Positives = 151/349 (43%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V+F+ DGS L+ D+ I+LW R + + + + + D++ IA +S
Sbjct: 888 VHCVQFSPDGSLLLSSSDDQTIRLWETDR-VHTSSAVALKRDTDVLFSHSDATIIAPDSS 946
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR------ 129
++ +L +TG V E +S++ C + +++ V GS+D TV + +V S
Sbjct: 947 NRLQVL-SGSTGAVVLESEELSSRIRCSCISRNAAFVALGSEDGTVQVIEVPSSKASVKL 1005
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGK----IYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
S H + C + D +I SS+ ++KW+ + + + V K + S S
Sbjct: 1006 SGHTKTVHHCQFTDDCEILITSSEDSTIRVVWKWRTGECMVLQGHMEPVRKFHLLSSSSS 1065
Query: 184 PTRKHIMSACGNNVKLWTAE-----EDYG-QEPIVDAC-FTRDCQCILTCSTDECLR-LF 235
P R S G VK+W +D E V +C + D + T S + + ++
Sbjct: 1066 P-RLFSWSFDGT-VKVWDLTRGQMLQDLVCHEGAVLSCDVSSDGRLFATTSANRTAKKVW 1123
Query: 236 DKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 295
A+ +++ +GHK D C + ++ G +G+I W ++D + +
Sbjct: 1124 SSASWKMIFLLEGHK--DCVRSCRFSWDNKRLATGDDNGEIRLWSMLDGALLKICSRDTK 1181
Query: 296 KAV-------VNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQAGLSSLY 337
++ V L P + ++S G +K W+ E G+A L + Y
Sbjct: 1182 DSMDSYHGGWVTDLHFSPDNRVLVST-GGYIKWWSVES--GEA-LQTFY 1226
Score = 140 (54.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 43/166 (25%), Positives = 75/166 (45%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
QGA+ F+ DGS +CG+ K ++++ L H +V + D IA+
Sbjct: 618 QGAVYYACFSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPDDRHIAT 677
Query: 73 GASDKSVILWEVTTGQPVRRWR-EHASKVTCVKF-NEDSSVVISG-SQDN--TVMMWDVK 127
ASDK V LW V G +R + EH ++ +F N V+++ S D +W+
Sbjct: 678 CASDKKVKLWNVERGVLIREFEVEHEEQINHCQFTNTGRRVLLATCSNDKFTNTKLWNPN 737
Query: 128 SRS-------H-HPIQ-CCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 164
++ H P+ CC D + SSDG + +++ +++
Sbjct: 738 KKTSQNTMFGHMEPVNHCCFSPNDLYLATSSSDGSLKLFEVSSANE 783
Score = 92 (37.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 54 HAHE--VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV 111
H H+ V A + D S+IAS + K++ +++ T+G+ + + H V C F+ D
Sbjct: 615 HPHQGAVYYACFSKDGSKIASCGASKALRVFKSTSGEKLLELQAHEEDVLCCAFSPDDRH 674
Query: 112 VISGSQDNTVMMWDVK 127
+ + + D V +W+V+
Sbjct: 675 IATCASDKKVKLWNVE 690
Score = 92 (37.4 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 45/222 (20%), Positives = 93/222 (41%)
Query: 134 IQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA 192
+ CC S D + I +SD K+ W + I + + + ++ R+ +++
Sbjct: 663 VLCCAFSPDDRHIATCASDKKVKLWNVERGVLIREFEVEHEEQINHCQFTNTGRRVLLAT 722
Query: 193 CGN----NVKLWTAEEDYGQ-------EPIVDACFTRDCQCILTCSTDECLRLFDKATGE 241
C N N KLW + Q EP+ CF+ + + T S+D L+LF+ ++
Sbjct: 723 CSNDKFTNTKLWNPNKKTSQNTMFGHMEPVNHCCFSPNDLYLATSSSDGSLKLFEVSSAN 782
Query: 242 L-----LEEYKGHKSGDFR--IECCLDSKD-SQIFCGSSDGKIYKWQLVDSSQISTLIHS 293
++ + + + ++C S D SQI C + + ++ + V++S + + +
Sbjct: 783 EWKSIDVDSFFPESDEEIKAMVKCSTWSADGSQIICAARN-TVFVFD-VETSDLLLELKT 840
Query: 294 VGKAVVNSLCSHPTRKHIMSACGN-NVKLWTAEEDYGQAGLS 334
+ + + P + A + V+LW E +A S
Sbjct: 841 SRLSTIQFCHACPNSSLLAVALSHYTVELWNFESSKKKAECS 882
Score = 58 (25.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 38/170 (22%), Positives = 68/170 (40%)
Query: 140 SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK- 198
S ++F S DG + W L + L+ G AV++ S R ++ K
Sbjct: 1063 SSSPRLFSWSFDGTVKVWDLTRGQMLQDLVCHEG-AVLSCDVSSDGRLFATTSANRTAKK 1121
Query: 199 LWTAEEDY------GQEPIVDAC-FTRDCQCILTCSTDECLRLFDKATGELLE--EYKGH 249
+W++ G + V +C F+ D + + T + +RL+ G LL+
Sbjct: 1122 VWSSASWKMIFLLEGHKDCVRSCRFSWDNKRLATGDDNGEIRLWSMLDGALLKICSRDTK 1181
Query: 250 KSGD-FRIECCLD---SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG 295
S D + D S D+++ S G KW V+S + +++G
Sbjct: 1182 DSMDSYHGGWVTDLHFSPDNRVLV--STGGYIKWWSVESGEALQTFYTMG 1229
>ZFIN|ZDB-GENE-030131-6176 [details] [associations]
symbol:mlst8 "MTOR associated protein, LST8
homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-6176 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 KO:K08266 CTD:64223
GeneTree:ENSGT00390000014795 HOGENOM:HOG000208395
HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3 EMBL:BC044176 EMBL:BC068352
IPI:IPI00508476 RefSeq:NP_956171.1 UniGene:Dr.7298
ProteinModelPortal:Q803V5 STRING:Q803V5 Ensembl:ENSDART00000012743
Ensembl:ENSDART00000148326 GeneID:792689 KEGG:dre:792689
InParanoid:Q803V5 OMA:NNKGNCY NextBio:20931153 ArrayExpress:Q803V5
Bgee:Q803V5 Uniprot:Q803V5
Length = 326
Score = 145 (56.1 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 45/193 (23%), Positives = 82/193 (42%)
Query: 30 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 89
T G D ++ W + + +T +VN D S IA+ A + + ++++ + P
Sbjct: 17 TAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAA-AGYQHIRMYDLNSNNP 75
Query: 90 --VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---------HHPIQC-C 137
V + + +T V F+ED + +G +D +WD++SR+ + PI C C
Sbjct: 76 NPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVC 135
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNN 196
L +++ G G I+ W L + LI +V NS+ P ++ + N
Sbjct: 136 LHPNQAELIVGDQSGVIHIWDL-KTDHNEQLIPEPDVSV-NSVHIDPDASYMAAVNSSGN 193
Query: 197 VKLWTAEEDYGQE 209
+W G E
Sbjct: 194 CYVWNLAGGMGDE 206
Score = 98 (39.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 35/166 (21%), Positives = 71/166 (42%)
Query: 58 VNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQ 117
VN T D +A+ D +V W+ +G R + S+V ++ D S++ +
Sbjct: 3 VNQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGY 62
Query: 118 DNTVMMWDVKSRSHHPI------QCCLDS----KDSQ-IFCGSSDGKIYKWQLVDSSQIS 166
+ + M+D+ S + +P+ + S +D + ++ G D W L +
Sbjct: 63 QH-IRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQC 121
Query: 167 TLIHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAEEDYGQEPI 211
I V A +N +C HP + ++ + V +W + D+ ++ I
Sbjct: 122 QRIFQVN-APINCVCLHPNQAELIVGDQSGVIHIWDLKTDHNEQLI 166
Score = 87 (35.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 213 DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
D F+ D Q I+T S+D RL+ TGE+ EY GH+ + CL DS
Sbjct: 275 DCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQ----KAVVCLAFNDS 323
Score = 69 (29.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 22/112 (19%), Positives = 47/112 (41%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWN-PYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
I +V F+ DG + T G D ++W+ RNL + +N + +++ G
Sbjct: 88 ITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGD 147
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+ +W++ T + E V V + D+S + + + +W++
Sbjct: 148 QSGVIHIWDLKTDHNEQLIPEPDVSVNSVHIDPDASYMAAVNSSGNCYVWNL 199
>ASPGD|ASPL0000002074 [details] [associations]
symbol:rcoA species:162425 "Emericella nidulans"
[GO:0070791 "cleistothecium development" evidence=IMP] [GO:0043941
"positive regulation of sexual sporulation resulting in formation
of a cellular spore" evidence=IMP] [GO:0045461 "sterigmatocystin
biosynthetic process" evidence=IMP] [GO:0016584 "nucleosome
positioning" evidence=IMP] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0080025 "phosphatidylinositol-3,5-bisphosphate
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
binding transcription factor activity involved in negative
regulation of transcription" evidence=IEA] [GO:0010914 "positive
regulation of sterigmatocystin biosynthetic process" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IEA] [GO:0007070
"negative regulation of transcription from RNA polymerase II
promoter during mitosis" evidence=IEA] [GO:0061392 "regulation of
transcription from RNA polymerase II promoter in response to
osmotic stress" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] [GO:0000433 "negative regulation of transcription
from RNA polymerase II promoter by glucose" evidence=IEA]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IEA] [GO:0035955 "negative regulation of dipeptide
transport by negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043156 "chromatin
remodeling in response to cation stress" evidence=IEA] [GO:0061418
"regulation of transcription from RNA polymerase II promoter in
response to hypoxia" evidence=IEA] [GO:0001198 "negative regulation
of mating-type specific transcription from RNA polymerase II
promoter" evidence=IEA] [GO:2000531 "regulation of fatty acid
biosynthetic process by regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000200558
InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
ProteinModelPortal:C8V0I4 EnsemblFungi:CADANIAT00007274 OMA:SQYIVNP
Uniprot:C8V0I4
Length = 574
Score = 194 (73.4 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 63/247 (25%), Positives = 117/247 (47%)
Query: 7 QTIDCKQGA--IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+++D K G IR+V F+ DG Y T DK+I++W+ + + GH ++ A
Sbjct: 309 ESVD-KSGDLYIRSVCFSPDGKYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFA 367
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ IASG+ DK+V LW++ G+ V VT V + D V +GS D TV +W
Sbjct: 368 GNGRYIASGSGDKTVRLWDIAEGKLVYTLSIEDG-VTTVAMSPDGLYVAAGSLDKTVRVW 426
Query: 125 DVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
D + + + ++ L++ D G D +Y + + + S+ K + + P
Sbjct: 427 D--TTTGYLVER-LENPD-----GHKDS-VYSVAFAPNGK-ELVSGSLDKTIKLWELNLP 476
Query: 185 TRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLE 244
+++ ++ G K E + ++ ++ C T D +++ S D ++ +D TG
Sbjct: 477 RQQY--NSAGKGGKCHRTFEGH-KDFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQM 533
Query: 245 EYKGHKS 251
+GHK+
Sbjct: 534 MLQGHKN 540
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 71/323 (21%), Positives = 125/323 (38%)
Query: 19 VRFNVDGSYCLTCGSDKKIKLWNPY--RNL-LLKTYG----GHAHEVNDATAACDSSQIA 71
VRF+ DG Y T G ++ ++++ +N+ +L+ G + + + D +A
Sbjct: 275 VRFSRDGKYLAT-GCNRSAQIFDVTLGQNVAVLQDESVDKSGDLY-IRSVCFSPDGKYLA 332
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
+GA DK + +W++ T + H + + F + + SGS D TV +WD+
Sbjct: 333 TGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFAGNGRYIASGSGDKTVRLWDIAEGKL 392
Query: 131 ------HHPIQCCLDSKDS-QIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVNSLCS 182
+ S D + GS D + W + L + G K V S+
Sbjct: 393 VYTLSIEDGVTTVAMSPDGLYVAAGSLDKTVRVWDTTTGYLVERLENPDGHKDSVYSVAF 452
Query: 183 HPTRKHIMS-ACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 241
P K ++S + +KLW E + ++ A +C R F+
Sbjct: 453 APNGKELVSGSLDKTIKLW--ELNLPRQQYNSAG-----------KGGKCHRTFE----- 494
Query: 242 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ-LVDSSQISTLIHSVGKAVVN 300
GHK DF + CL + GS D + W + ++Q+ H K V
Sbjct: 495 ------GHK--DFVLSVCLTPDGHWVMSGSKDRGVQFWDPITGNAQMMLQGH---KNSVI 543
Query: 301 SLCSHPTRKHIMSACGN-NVKLW 322
S+ PT + G+ ++W
Sbjct: 544 SVAPSPTGNLFATGSGDMRARIW 566
>DICTYBASE|DDB_G0286457 [details] [associations]
symbol:strap "putative serine-threonine kinase
receptor-associated protein" species:44689 "Dictyostelium
discoideum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0286457
GenomeReviews:CM000153_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AAFI02000085 GO:GO:0030512
InterPro:IPR013979 Pfam:PF08662 KO:K13137 OMA:LWQTTVG
RefSeq:XP_637742.1 ProteinModelPortal:Q54LT8
EnsemblProtists:DDB0233062 GeneID:8625608 KEGG:ddi:DDB_G0286457
InParanoid:Q54LT8 ProtClustDB:CLSZ2430103 Uniprot:Q54LT8
Length = 293
Score = 186 (70.5 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 69/279 (24%), Positives = 119/279 (42%)
Query: 22 NVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 81
N DGS+ ++ D L N + T+ GH V + +SQ + ++D +V L
Sbjct: 23 NSDGSFIVSACLDGSPMLRNGENGDWIGTFEGHKGAVWSSRFNSTASQALTASADYTVKL 82
Query: 82 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHP-------- 133
W+ G + EH S V F+ ++S V++G + + ++D++ R + P
Sbjct: 83 WDTLNGSEILSI-EHQSIVKTADFSNNNSRVVTGGSEKILRIFDLE-RPNDPLLQISGHT 140
Query: 134 --IQCCLDS--KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
I+ S D + G D I W L +Q+S K+ + S+ R+ +
Sbjct: 141 NTIKTATWSVHNDDIVLSGGLDEVIRIWDLRSGTQVSLC----AKSSITSMEFSKDRRFL 196
Query: 190 MSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCI-------LTCSTDECLRLFDKATGEL 242
++ GN V W A+ Y + + F +C + + +D + ++D +TG
Sbjct: 197 VTTAGNEVTFWDAQSFYPLK-VYSLPFDVNCASLHPDNSKFIAGGSDFWVHVYDFSTGNE 255
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 280
+E KGH + CC S D F GS DG I W+
Sbjct: 256 IEVNKGHHGP---VNCCRFSPDGASFASGSLDGTIRLWK 291
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 31/114 (27%), Positives = 58/114 (50%)
Query: 11 CKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQI 70
C + +I ++ F+ D + +T ++ + W+ LK Y +VN A+ D+S+
Sbjct: 179 CAKSSITSMEFSKDRRFLVTTAGNE-VTFWDAQSFYPLKVYS-LPFDVNCASLHPDNSKF 236
Query: 71 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+G SD V +++ +TG + + H V C +F+ D + SGS D T+ +W
Sbjct: 237 IAGGSDFWVHVYDFSTGNEIEVNKGHHGPVNCCRFSPDGASFASGSLDGTIRLW 290
Score = 129 (50.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 33/143 (23%), Positives = 70/143 (48%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
+ T + +GA+ + RFN S LT +D +KLW+ + + H V A +
Sbjct: 49 IGTFEGHKGAVWSSRFNSTASQALTASADYTVKLWDTLNGSEILSIE-HQSIVKTADFSN 107
Query: 66 DSSQIASGASDKSVILWEVTT-GQPVRRWREHASKVTCVKFN-EDSSVVISGSQDNTVMM 123
++S++ +G S+K + ++++ P+ + H + + ++ + +V+SG D + +
Sbjct: 108 NNSRVVTGGSEKILRIFDLERPNDPLLQISGHTNTIKTATWSVHNDDIVLSGGLDEVIRI 167
Query: 124 WDVKSRSHHPIQCCLDSKDSQIF 146
WD++S + + C S S F
Sbjct: 168 WDLRSGTQVSL-CAKSSITSMEF 189
>SGD|S000001308 [details] [associations]
symbol:MET30 "F-box protein containing five copies of the
WD40 motif" species:4932 "Saccharomyces cerevisiae" [GO:0008652
"cellular amino acid biosynthetic process" evidence=IEA]
[GO:0019344 "cysteine biosynthetic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IGI;IPI] [GO:0000209 "protein polyubiquitination"
evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0009086
"methionine biosynthetic process" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0043224 "nuclear SCF ubiquitin ligase
complex" evidence=IDA] [GO:0046685 "response to arsenic-containing
substance" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IDA] [GO:0000114 "regulation of transcription involved in
G1 phase of mitotic cell cycle" evidence=IMP] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IMP] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IMP] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 UniPathway:UPA00143 SGD:S000001308 GO:GO:0005737
GO:GO:0046686 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0046685 GO:GO:0000082 EMBL:BK006942
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
SUPFAM:SSF81383 EMBL:Z46861 GO:GO:0000114 GO:GO:0009086
GO:GO:0000209 GO:GO:0019344 GO:GO:0043130 GO:GO:0031146
GO:GO:0000087 GO:GO:0043224 GO:GO:0030174
GeneTree:ENSGT00690000101849 EMBL:L26505 PIR:S49932
RefSeq:NP_012218.1 ProteinModelPortal:P39014 SMR:P39014
DIP:DIP-1439N IntAct:P39014 MINT:MINT-385167 STRING:P39014
PaxDb:P39014 PeptideAtlas:P39014 EnsemblFungi:YIL046W GeneID:854765
KEGG:sce:YIL046W CYGD:YIL046w HOGENOM:HOG000166480 KO:K10259
OMA:ILCYLDT OrthoDB:EOG496313 NextBio:977517 Genevestigator:P39014
GermOnline:YIL046W Uniprot:P39014
Length = 640
Score = 174 (66.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 70/246 (28%), Positives = 115/246 (46%)
Query: 29 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ--IASGASDKSVILWEVT 85
L GS DK I++WN + TY GH+ D+ + DS Q I SG++DK+V +W V
Sbjct: 355 LITGSLDKTIRVWNYITGECISTYRGHS----DSVLSVDSYQKVIVSGSADKTVKVWHVE 410
Query: 86 TGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCC 137
+ + R H V CVK + S S S D T+ MWD+++ R H +Q
Sbjct: 411 S-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI 469
Query: 138 --LDSKDSQIFC--GSSDGKIYKWQ--LVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS 191
L KD + +SDG + + D + S + + V++ +PT H++S
Sbjct: 470 IPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPT--HLLS 527
Query: 192 ACG--NNVKLW---TAEEDYGQEPIVDACF--TRDCQCILTCSTDECLRLFDKATGELLE 244
CG N +KLW T + Q V+ + D I++ S D ++++D +G+ +
Sbjct: 528 -CGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAADNFRIISGSHDGSIKVWDLQSGKCMH 586
Query: 245 EYKGHK 250
+ G +
Sbjct: 587 TFNGRR 592
Score = 158 (60.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 44/155 (28%), Positives = 74/155 (47%)
Query: 29 LTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 87
L GS D I +W+ + L++ GH+ V T D ++ +G+ DK++ +W TG
Sbjct: 315 LFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVK--TLYFDDRKLITGSLDKTIRVWNYITG 372
Query: 88 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ-------CC-LD 139
+ + +R H+ V V + V++SGS D TV +W V+SR+ + ++ C L
Sbjct: 373 ECISTYRGHSDSVLSV--DSYQKVIVSGSADKTVKVWHVESRTCYTLRGHTEWVNCVKLH 430
Query: 140 SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGK 174
K F S D I W + +S + VG+
Sbjct: 431 PKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQ 465
Score = 132 (51.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 66/255 (25%), Positives = 111/255 (43%)
Query: 90 VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQC-CLDSKD 142
++ ++ H V ++FN ++ +GS D+T+ +WD ++ S H L D
Sbjct: 295 IQEFKGHMDGVLTLQFNY--RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDD 352
Query: 143 SQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
++ GS D I W + IST HS V+S +K I+S + VK+W
Sbjct: 353 RKLITGSLDKTIRVWNYITGECISTYRGHSDSVLSVDSY-----QKVIVSGSADKTVKVW 407
Query: 201 TAEED--Y---GQEPIVDAC--FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 253
E Y G V+ + C +CS D +R++D T L+ ++GH G
Sbjct: 408 HVESRTCYTLRGHTEWVNCVKLHPKSFSCF-SCSDDTTIRMWDIRTNSCLKVFRGHV-GQ 465
Query: 254 FRIECCLDSKDSQIFC--GSSDGKIYKWQ--LVDSSQISTLIHSVGKAVVNSLCSHPTRK 309
+ L KD + +SDG + + D + S + + V++ +PT
Sbjct: 466 VQKIIPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETVLDENIPYPT-- 523
Query: 310 HIMSACG--NNVKLW 322
H++S CG N +KLW
Sbjct: 524 HLLS-CGLDNTIKLW 537
Score = 82 (33.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 208 QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQI 267
QE ++D +L+C D ++L+D TG+ + GH G + I + + +I
Sbjct: 511 QETVLDENIPYPTH-LLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIA----ADNFRI 565
Query: 268 FCGSSDGKIYKWQL 281
GS DG I W L
Sbjct: 566 ISGSHDGSIKVWDL 579
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 188 (71.2 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 40/120 (33%), Positives = 64/120 (53%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F DG +T DK +K+W+ +R L + H + V A + D I S +
Sbjct: 106 VRSVHFCSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASD 165
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK+V LW+ T+ + V + EH VT V F+ + + + DNTV +WD +R+H +Q
Sbjct: 166 DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD--TRTHRLVQ 223
Score = 170 (64.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 72/305 (23%), Positives = 130/305 (42%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH V + ++ +ASG+ D ++++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 107 EDSSVVISGSQDNTVMMW--DVKS-----RSHHP-IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++ SGS+D TV +W +VK R+H ++ D Q+ +SD K K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK-- 128
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSH--PTRKHIMSACGNN-VKLW--TAEE---DYGQEP 210
V S+ + S+ + + C+ P + I+SA + VKLW T+ E Y +
Sbjct: 129 -VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 211 --IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ F CI D ++++D T L++ Y+ H + + + +
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALS--FHPSGNYLI 245
Query: 269 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAE-- 325
SSD + L++ + TL G A ++ T ++ S + V +W +
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPAT--TVAFSRTGEYFASGGSDEQVMVWKSNFD 303
Query: 326 -EDYG 329
DYG
Sbjct: 304 TVDYG 308
Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/152 (23%), Positives = 69/152 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R +F+ DG ++ DK +KLW+ + +Y H V + IA+
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
D +V +W+ T + V+ ++ H++ V + F+ + +I+ S D+T+ + D+
Sbjct: 208 DNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 129 RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQ 158
H P S+ + F G SD ++ W+
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 122 (48.0 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 5 CVQTIDCKQGA-IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
CV + C+ G + V F+ G+ G D +K+W+ + L++ Y H+ VN +
Sbjct: 179 CVHSY-CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHSAAVNALSF 237
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ + + +SD ++ + ++ G+ + H T V F+ SG D VM+
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 124 W 124
W
Sbjct: 298 W 298
>TAIR|locus:2148965 [details] [associations]
symbol:TOZ "AT5G16750" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA;IMP]
[GO:0009880 "embryonic pattern specification" evidence=RCA;IMP]
[GO:0051301 "cell division" evidence=RCA;IMP] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006406 "mRNA export from nucleus"
evidence=RCA] [GO:0006606 "protein import into nucleus"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010162 "seed dormancy
process" evidence=RCA] [GO:0010182 "sugar mediated signaling
pathway" evidence=RCA] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=RCA] [GO:0010431 "seed
maturation" evidence=RCA] [GO:0010564 "regulation of cell cycle
process" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0048366
"leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR013934 InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GO:GO:0005730 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0009880 GO:GO:0006364
HSSP:P16649 GO:GO:0032040 EMBL:AL391147 HOGENOM:HOG000188765
KO:K14555 OMA:ADSKLIR IPI:IPI00523827 PIR:T51507 RefSeq:NP_568338.2
UniGene:At.24110 ProteinModelPortal:Q9LFE2 SMR:Q9LFE2 STRING:Q9LFE2
PRIDE:Q9LFE2 EnsemblPlants:AT5G16750.1 GeneID:831538
KEGG:ath:AT5G16750 TAIR:At5g16750 InParanoid:Q9LFE2
PhylomeDB:Q9LFE2 ProtClustDB:CLSN2680022 Genevestigator:Q9LFE2
Uniprot:Q9LFE2
Length = 876
Score = 154 (59.3 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 31/125 (24%), Positives = 65/125 (52%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
TI+ + + A+ + D + G ++I++W+ ++++ GH V
Sbjct: 55 TIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASG 114
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWD 125
+A+ +D+ V++W+V G +R H V+ + F+ DS+ ++ISGS D TV +WD
Sbjct: 115 GLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Query: 126 VKSRS 130
+ +++
Sbjct: 175 LNAKN 179
Score = 142 (55.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/119 (26%), Positives = 55/119 (46%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
V T+ + I +V F+ +T DK +K+W LKT+ GH V A+
Sbjct: 534 VVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFIT 593
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
D +Q S +D + LW V T + + + +H KV + + + ++ +G D + +W
Sbjct: 594 DGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Score = 133 (51.9 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 30/132 (22%), Positives = 61/132 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C+++ +G + + + G T G+D+K+ +W+ + GH V+
Sbjct: 94 CIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFH 153
Query: 65 CDSSQ--IASGASDKSVILWEVTTGQPVRR----WREHASKVTCVKFNEDSSVVISGSQD 118
DS++ + SG+ D +V +W++ ++ +H S VT + +ED + S +D
Sbjct: 154 PDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRD 213
Query: 119 NTVMMWDVKSRS 130
V +WD+ S
Sbjct: 214 KVVNLWDLHDYS 225
Score = 104 (41.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 29/147 (19%), Positives = 59/147 (40%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DGS+ + C I + + + + T G + + + D + S + + +W+
Sbjct: 30 DGSF-IACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWD 88
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQC 136
+ T + +R W+ H V + + ++ + D V++WDV R H +
Sbjct: 89 LETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVS 148
Query: 137 CL----DSKDSQIFCGSSDGKIYKWQL 159
+ DS + + GS D + W L
Sbjct: 149 SILFHPDSNKNILISGSDDATVRVWDL 175
Score = 90 (36.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 36/146 (24%), Positives = 59/146 (40%)
Query: 142 DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
DS + GS D W+L D + TL K + S+ + +M+A G+ VK+W
Sbjct: 511 DSLVCTGSEDRTASIWRLPDLVHVVTL--KGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Query: 201 TAEEDY------GQ-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 253
+ G ++ A F D ++C D L+L++ T E + Y H+
Sbjct: 569 AISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKV 628
Query: 254 FRIECCLDSKDSQIFCGSSDGKIYKW 279
+ + + K I G D I W
Sbjct: 629 WAL--AVGKKTEMIATGGGDAVINLW 652
Score = 89 (36.4 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 20/69 (28%), Positives = 36/69 (52%)
Query: 221 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 280
QC++T S D+ ++++ + G L+ ++GH S R D + CG+ DG + W
Sbjct: 554 QCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQF-VSCGA-DGLLKLWN 611
Query: 281 LVDSSQIST 289
+ S I+T
Sbjct: 612 VNTSECIAT 620
Score = 82 (33.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 53/219 (24%), Positives = 94/219 (42%)
Query: 10 DCKQGAIRAVRFNVD-GSYCLTCGSDKKIKLWNPYRNL------LLKTYGGHAHEVNDAT 62
+ K+G A D G C+T +D++ ++ N+ L K G+ E+ D
Sbjct: 308 ESKRGFTAAAMLPSDHGLLCVT--ADQQFFFYSVVENVEETELVLSKRLVGYNEEIADMK 365
Query: 63 AACDSSQIASGASD-KSVILWEVTTGQPVRRWREHASKV----TCVKFNEDSSVVISGSQ 117
D Q + A++ + V +++V T H V TCV + + ++++GS+
Sbjct: 366 FLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVS-SSGNVLIVTGSK 424
Query: 118 DNTVMMWDVKSRS-------HH-PIQCCLDSKDSQIF--CGSSDGKIYKWQLVDSSQIST 167
D TV +W+ S+S H+ I +K S F GS D + W L S+ S
Sbjct: 425 DKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSLDGISEDSE 484
Query: 168 L-IHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED 205
I+ ++VV +H + ++ N+ + T ED
Sbjct: 485 EPINLKTRSVV---AAHDKDINSVAVARNDSLVCTGSED 520
Score = 77 (32.2 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 28/122 (22%), Positives = 48/122 (39%)
Query: 206 YGQEPIVDACFTRDCQCILTCSTD-ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKD 264
Y +E I D F D + L +T+ E +R++D AT GHK ++ C+ S
Sbjct: 357 YNEE-IADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSG 415
Query: 265 SQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 323
+ I GS D + W S I G + + + + +K+W+
Sbjct: 416 NVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWS 475
Query: 324 AE 325
+
Sbjct: 476 LD 477
Score = 75 (31.5 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 44/207 (21%), Positives = 72/207 (34%)
Query: 136 CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGN 195
C S + I GS D + W S I G + + + +
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDR 469
Query: 196 NVKLWTAE---EDYGQEPI------VDACFTRDCQCILTCSTDE--CLRLFDKATG---- 240
+K+W+ + ED +EPI V A +D + D C D+
Sbjct: 470 TLKVWSLDGISED-SEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRL 528
Query: 241 -ELLE--EYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 297
+L+ KGHK F +E + D + S D + W + D S + T
Sbjct: 529 PDLVHVVTLKGHKRRIFSVE--FSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSV 586
Query: 298 VVNSLCSHPTRKHIMSACGNN--VKLW 322
+ S + T+ +CG + +KLW
Sbjct: 587 LRASFITDGTQ---FVSCGADGLLKLW 610
Score = 52 (23.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 264 DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
DS + GS D W+L D + TL K + S+ + +M+A G+ VK+W
Sbjct: 511 DSLVCTGSEDRTASIWRLPDLVHVVTL--KGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Query: 323 TAEE 326
+
Sbjct: 569 AISD 572
>UNIPROTKB|F1S845 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:ERQNNQI ProteinModelPortal:F1S845 Ensembl:ENSSSCT00000011591
Uniprot:F1S845
Length = 542
Score = 193 (73.0 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 61/225 (27%), Positives = 99/225 (44%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D +Y L+ D ++LW+ L Y GH + V D + SG
Sbjct: 304 GPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG 363
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV + +
Sbjct: 364 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 423
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS-H 183
H PI S + + G++DG++ W + + L K +++CS
Sbjct: 424 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-----KGHTDTVCSLR 478
Query: 184 PTRKHIMSACG---NNVKLWTA-------EEDYGQEPIVDACFTR 218
+R + A G N V+LW A E D QE ++ T+
Sbjct: 479 FSRDGEILASGSMDNTVRLWDAVKAFEDLETDNSQELLLGTYMTK 523
Score = 175 (66.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +VN
Sbjct: 335 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR 394
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ +A+G++D++V LW+V G VR + H + + F+ + + +G+ D V+
Sbjct: 395 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 454
Query: 123 MWDV-------KSRSHHPIQCCLD-SKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H C L S+D +I GS D + W V
Sbjct: 455 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAV 501
Score = 116 (45.9 bits), Expect = 0.00079, P = 0.00079
Identities = 55/237 (23%), Positives = 95/237 (40%)
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
A D S I + D + + T ++ H+ V F+ D + ++S S+D TV +
Sbjct: 270 AADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRL 329
Query: 124 WDVKS-------RSH-HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 175
W +++ + H +P+ S F ++ + D Q I + A
Sbjct: 330 WSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQ-PLRIFAGHLA 388
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLWTAEEDY------GQE-PIVDACFTRDCQCILTCS 227
VN HP ++ + + V+LW G + PI F+ + + + T +
Sbjct: 389 DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGA 448
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLD-SKDSQIFC-GSSDGKIYKWQLV 282
TD + L+D G ++ E KGH C L S+D +I GS D + W V
Sbjct: 449 TDGRVLLWDIGHGLMVGELKGHTD----TVCSLRFSRDGEILASGSMDNTVRLWDAV 501
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 192 (72.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 52/200 (26%), Positives = 86/200 (43%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
++R+V F+ DG +T DK +K+W R L + H + V A + D IAS
Sbjct: 104 SVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIASCG 163
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---H 131
D++V LW+ ++ Q + + ++ T V FN + + S DNT+ +WD+++ H
Sbjct: 164 DDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQH 223
Query: 132 HPIQC----CLDSKDS--QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
+ + C S + GSSD I L++ I TL H V+ S
Sbjct: 224 YKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLEGRLIYTL-HGHKGPVLTVTFSRDG 282
Query: 186 RKHIMSACGNNVKLWTAEED 205
+ V +W D
Sbjct: 283 DLFASGGADSQVLMWKTNFD 302
Score = 191 (72.3 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 73/302 (24%), Positives = 128/302 (42%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH ++ A ++ Q+A+G+ DKS+++W + R+ H +T V F
Sbjct: 10 LERHFKGHKDVISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFA 69
Query: 107 EDSSVVISGSQDNTVMMW--DVKSRSH----HP--IQCCLDSKDSQIFCGSSDGKIYKWQ 158
S+V S S+D TV +W +K S H ++ S+D Q +SD K K
Sbjct: 70 PSGSLVASSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVW 129
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSH--PTRKHIMSACGNN--VKLWTAEE--------DY 206
V+ + ++S+ + C+ P + ++++CG++ V+LW DY
Sbjct: 130 GVERKKF---LYSLNRHTNWVRCARFSPDGR-LIASCGDDRTVRLWDTSSHQCINIFTDY 185
Query: 207 GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC-CLDSKDS 265
G F CI + D ++++D T +L++ YK H +G + C +
Sbjct: 186 GGSATF-VDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAG---VNCFSFHPSGN 241
Query: 266 QIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
+ GSSD I L++ I TL H V+ S + V +W
Sbjct: 242 YLISGSSDSTIKILDLLEGRLIYTL-HGHKGPVLTVTFSRDGDLFASGGADSQVLMWKTN 300
Query: 326 ED 327
D
Sbjct: 301 FD 302
Score = 183 (69.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 66/301 (21%), Positives = 114/301 (37%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
I FN + T DK + +WN + GH + A S +AS +
Sbjct: 21 ISCADFNPNNKQLATGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSR 80
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SR 129
D++V LW + ++ H + V V F+ D +++ S D +V +W V+ S
Sbjct: 81 DQTVRLWTPSIKGESTVFKAHTASVRSVHFSRDGQRLVTASDDKSVKVWGVERKKFLYSL 140
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
+ H ++C S D ++ D + + W I+ G A S T
Sbjct: 141 NRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTC 200
Query: 187 KHIMSACGNNVKLWTAE-----EDYGQEPIVDACFT--RDCQCILTCSTDECLRLFDKAT 239
S N +K+W + Y CF+ +++ S+D +++ D
Sbjct: 201 I-ASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLISGSSDSTIKILDLLE 259
Query: 240 GELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQL-VDSSQISTLIHSVGKA 297
G L+ GHK + S+D +F G +D ++ W+ DS L+ K
Sbjct: 260 GRLIYTLHGHKGPVLTVTF---SRDGDLFASGGADSQVLMWKTNFDSLNYRELLSKHSKR 316
Query: 298 V 298
V
Sbjct: 317 V 317
Score = 147 (56.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C+ G+ V FN G+ + G+D IK+W+ N L++ Y H VN +
Sbjct: 176 HQCINIFTDYGGSATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHNAGVNCFS 235
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ + SG+SD ++ + ++ G+ + H V V F+ D + SG D+ V+
Sbjct: 236 FHPSGNYLISGSSDSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFASGGADSQVL 295
Query: 123 MW 124
MW
Sbjct: 296 MW 297
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 193 (73.0 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 55/209 (26%), Positives = 91/209 (43%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
G + + RF D S L+C D I+ W+ + N +L Y GHA+ V D + S A
Sbjct: 339 GPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVL--YQGHAYPVWDLDISPHSLYFA 396
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
S + D++ LW P+R + H + V CVKF+ +S+ + +GS D TV +W + +
Sbjct: 397 SASHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNS 456
Query: 131 ------HH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H P+ S + + + D ++ W L + L + SL
Sbjct: 457 VRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSLTF 514
Query: 183 HPTRKHIMSAC-GNNVKLWTAEEDYGQEP 210
P + SA N+V++W + P
Sbjct: 515 SPDSSLVASASMDNSVRVWDIRSSHCSTP 543
Score = 152 (58.6 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 69/282 (24%), Positives = 121/282 (42%)
Query: 26 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
S L G D IKLW+ R+ LK+ H +V+ ACD + D
Sbjct: 276 SKLLAAGFDNSCIKLWS-LRSKKLKSEP-HQVDVSRIHLACDFLEEEDDEDDN------- 326
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQC 136
G ++ R H V +F DSS ++S S+D ++ WD+ S + H +P+
Sbjct: 327 -LGTEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWD 385
Query: 137 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGN 195
S S F +S + + D + I++ A V+ + HP ++ + +
Sbjct: 386 LDISPHSLYFASASHDRTARLWSFDRTY-PLRIYAGHLADVDCVKFHPNSNYLATGSTDK 444
Query: 196 NVKLWTAEEDYG-------QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 248
V+LW+ ++ + P++ F+ + + + + D+ L+L+D A+G L +E +G
Sbjct: 445 TVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 504
Query: 249 HKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQLVDSSQIST 289
H I S DS + +S D + W + SS ST
Sbjct: 505 HTDN---ITSLTFSPDSSLVASASMDNSVRVWD-IRSSHCST 542
Score = 128 (50.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G + ++ F+ +G Y + G D+++KLW+ L K GH + T + DSS +AS
Sbjct: 464 RGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLVAS 523
Query: 73 GASDKSVILWEV 84
+ D SV +W++
Sbjct: 524 ASMDNSVRVWDI 535
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 190 (71.9 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 41/120 (34%), Positives = 64/120 (53%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F DG +T DK +K+W+ +R L + H + V A + D I S +
Sbjct: 106 VRSVHFCSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 165
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK+V LW+ T+ + V + EH VT V F+ + + + DNTV +WDV R+H +Q
Sbjct: 166 DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV--RTHRLLQ 223
Score = 181 (68.8 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 75/306 (24%), Positives = 131/306 (42%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH V + ++ Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 107 EDSSVVISGSQDNTVMMW--DVKS-----RSHHP-IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++ SGS+D TV +W +VK R+H ++ D Q F +SD K K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK-- 128
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSH--PTRKHIMSACGNN-VKLW--TAEE---DYGQEP 210
V S+ + S+ + + C+ P + I+SA + VKLW T+ E Y +
Sbjct: 129 -VWSTHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHG 187
Query: 211 --IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ F CI D ++++D T LL+ Y+ H + + + +
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALS--FHPSGNYLV 245
Query: 269 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAE-- 325
SSD + L++ + TL G A ++ T ++ S + V +W +
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPAT--TVAFSRTGEYFASGGSDEQVMVWKSNFD 303
Query: 326 -EDYGQ 330
DYG+
Sbjct: 304 IVDYGE 309
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 34/152 (22%), Positives = 70/152 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R +F+ DG ++ DK +KLW+ + +Y H V + IA+
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
D +V +W+V T + ++ ++ H++ V + F+ + +++ S D+T+ + D+
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLMEGRLLYTL 267
Query: 129 RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQ 158
H P S+ + F G SD ++ W+
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 5 CVQTIDCKQGA-IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
CV + C+ G + V F+ G+ G D +K+W+ + LL+ Y H+ VN +
Sbjct: 179 CVHSY-CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNALSF 237
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ + + +SD ++ + ++ G+ + H T V F+ SG D VM+
Sbjct: 238 HPSGNYLVTASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 124 W 124
W
Sbjct: 298 W 298
>ASPGD|ASPL0000058626 [details] [associations]
symbol:AN1208 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 EMBL:AACD01000017
GO:GO:0007049 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_658812.1
ProteinModelPortal:Q5BE22 STRING:Q5BE22
EnsemblFungi:CADANIAT00001416 GeneID:2876986 KEGG:ani:AN1208.2
OMA:KSEEHAR OrthoDB:EOG4QZBVP Uniprot:Q5BE22
Length = 452
Score = 191 (72.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 49/198 (24%), Positives = 84/198 (42%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R++ + + + D+ IK+WN L T GH V + + S
Sbjct: 144 GWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHISTVRGLAVSPRHPYLFSC 203
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-H 132
DK V W++ T + +R + H S V + + ++++G +D +WD+++RS+ H
Sbjct: 204 GEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIH 263
Query: 133 ----------PIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
+QC D Q+ GS D + W L + L H K + SL +
Sbjct: 264 VLSGHTGTVADVQC--QEADPQVITGSLDATVRLWDLAAGKTMGVLTHH--KKGIRSLAT 319
Query: 183 HPTRKHIMSACGNNVKLW 200
HP SA ++K W
Sbjct: 320 HPREFTFASASTGSIKQW 337
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 52/256 (20%), Positives = 100/256 (39%)
Query: 40 WN-PYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHAS 98
W+ P++ L++ GH V ++ ASGA D+++ +W + TG H S
Sbjct: 129 WHAPWK--LMRVISGHLGWVRSLAVEPNNEWFASGAGDRTIKIWNLATGALRLTLTGHIS 186
Query: 99 KVTCVKFNEDSSVVISGSQDNTVMMWDVKS----RSHHP-----IQCCLDSKDSQIFCGS 149
V + + + S +D V WD+++ R +H L + + G
Sbjct: 187 TVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYTLALHPRLDLLVTGG 246
Query: 150 SDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW--TAEEDYG 207
DG W + S I L G V + C + I + V+LW A + G
Sbjct: 247 RDGVARVWDMRTRSNIHVLSGHTG-TVADVQCQEADPQVITGSLDATVRLWDLAAGKTMG 305
Query: 208 ----QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSK 263
+ + + T + ++ ++ + GE ++ ++GH + I ++
Sbjct: 306 VLTHHKKGIRSLATHPREFTFASASTGSIKQWKCPGGEFMQNFEGHNA---IINTLSVNE 362
Query: 264 DSQIFCGSSDGKIYKW 279
D+ +F G +G + W
Sbjct: 363 DNVLFSGGDNGSMSFW 378
Score = 123 (48.4 bits), Expect = 0.00010, P = 0.00010
Identities = 44/184 (23%), Positives = 68/184 (36%)
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEED 205
G+ D I W L + TL + + V L P ++ S CG + VK W E +
Sbjct: 161 GAGDRTIKIWNLATGALRLTLTGHI--STVRGLAVSPRHPYLFS-CGEDKMVKCWDLETN 217
Query: 206 ------YGQ-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
+G + ++T D R++D T + GH ++C
Sbjct: 218 KVIRHYHGHLSGVYTLALHPRLDLLVTGGRDGVARVWDMRTRSNIHVLSGHTGTVADVQC 277
Query: 259 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN 318
D Q+ GS D + W L + L H K + SL +HP SA +
Sbjct: 278 --QEADPQVITGSLDATVRLWDLAAGKTMGVLTHH--KKGIRSLATHPREFTFASASTGS 333
Query: 319 VKLW 322
+K W
Sbjct: 334 IKQW 337
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 187 (70.9 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 59/257 (22%), Positives = 110/257 (42%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
++ V + DG + L+ D ++LW+ + + + + GH +V + D+ QI SG+
Sbjct: 73 VQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSR 132
Query: 76 DKSVILWEVTTGQ---PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSH 131
D ++ +W T G+ + H V+C++F+ ++ ++SGS DN V +WD+KS + +
Sbjct: 133 DATIKVWN-TLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCN 191
Query: 132 HP-------IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
H + S D + G D W+L + L + +N+L
Sbjct: 192 HTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKL---EARNTINALAFS 248
Query: 184 PTRKHIMSACGNNVKLWTAEEDYGQEPIV----DACFTRDCQCILTCSTDECLRLFDKAT 239
P + + +A + + +W IV + F + CL L A
Sbjct: 249 PNKYWLSAATDDKIIIWDLLTKQVLAEIVPEVKEQAFDSKKKKESKPKAPACLSLAWSAD 308
Query: 240 GELLEEYKGHKSGDFRI 256
G +L Y G+ G R+
Sbjct: 309 GSVL--YAGYNDGLIRV 323
Score = 153 (58.9 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 54/210 (25%), Positives = 90/210 (42%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
GH+H V D + D SG+ D ++ LW++T G R ++ H V V F+ D+ +
Sbjct: 68 GHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQI 127
Query: 113 ISGSQDNTVMMWDVKSR---------SHHP-IQCCLDSKDSQ-IFCGSSDGKIYKWQLVD 161
ISGS+D T+ +W+ +H + C S ++ I GS D K+ W +
Sbjct: 128 ISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKS 187
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK-LWTAEED---YGQEP--IVDAC 215
TL G VN++ P S + LW Y E ++A
Sbjct: 188 FKCNHTLTDHTG--YVNTVTISPDGSLCASGGKDTFACLWELSSGKPLYKLEARNTINAL 245
Query: 216 FTRDCQCILTCSTDECLRLFDKATGELLEE 245
+ L+ +TD+ + ++D T ++L E
Sbjct: 246 AFSPNKYWLSAATDDKIIIWDLLTKQVLAE 275
Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 29/120 (24%), Positives = 60/120 (50%)
Query: 10 DCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ 69
+ Q + +RF+ + ++ D K+K+W+ T H VN T + D S
Sbjct: 153 EAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSL 212
Query: 70 IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 129
ASG D LWE+++G+P+ + E + + + F+ + +S + D+ +++WD+ ++
Sbjct: 213 CASGGKDTFACLWELSSGKPLYKL-EARNTINALAFSPNK-YWLSAATDDKIIIWDLLTK 270
Score = 123 (48.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/165 (24%), Positives = 70/165 (42%)
Query: 53 GHAHEVNDATAACDSSQ-IASGASDKSVILWEVTT------GQPVRRWREHASKVTCVKF 105
GH V + ++ I S + DK+V++W++T G+ R + H+ V V
Sbjct: 19 GHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVI 78
Query: 106 NEDSSVVISGSQDNTVMMWDV---------KSRSHHPIQCCLDSKDSQIFCGSSDGKIYK 156
+ D +SGS DNT+ +WD+ K + + S + QI GS D I
Sbjct: 79 SHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKV 138
Query: 157 WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
W + + + + V+ + P I+S +N VK+W
Sbjct: 139 WNTLGECKFTLEGPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIW 183
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 57/209 (27%), Positives = 90/209 (43%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
G + + RF D S L+C D I+ W+ + N +L Y GHA+ V D + S A
Sbjct: 343 GPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVL--YQGHAYPVWDLDISPCSLYFA 400
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
S + D++ LW P+R + H V CVKF+ +S+ + +GS D TV +W + +
Sbjct: 401 SASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNS 460
Query: 131 ------HH-PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H P+ S + + + D ++ W L + L + SL
Sbjct: 461 VRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDN--ITSLTF 518
Query: 183 HPTRKHIMSAC-GNNVKLWTAEEDYGQEP 210
P I SA N+V++W Y P
Sbjct: 519 SPDSSLIASASMDNSVRVWDIRNTYCNAP 547
Score = 142 (55.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 63/274 (22%), Positives = 117/274 (42%)
Query: 26 SYCLTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
S L G D +KLW+ R+ LK+ H +V+ ACD D +
Sbjct: 280 SKLLAAGFDNSCVKLWS-LRSKKLKSEP-HLVDVSRIRLACDILDEEEEEDDSA------ 331
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQC 136
G ++ R H V +F DSS ++S S+D ++ WD++S + H +P+
Sbjct: 332 --GTEMKILRGHCGPVYSTRFLSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVWD 389
Query: 137 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGN 195
S S F +S + + D + I++ V+ + HP ++ + +
Sbjct: 390 LDISPCSLYFASASHDRTARLWSFDRTY-PLRIYAGHLLDVDCVKFHPNSNYLATGSTDK 448
Query: 196 NVKLWTAEEDYG-------QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG 248
V+LW+ ++ + P++ F+ + + + + D+ L+L+D A+G L +E +G
Sbjct: 449 TVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRG 508
Query: 249 HKSGDFRIECCLDSKDSQIFCGSS-DGKIYKWQL 281
H I S DS + +S D + W +
Sbjct: 509 HTDN---ITSLTFSPDSSLIASASMDNSVRVWDI 539
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G + A+ F+ +G Y + G D+++KLW+ L K GH + T + DSS IAS
Sbjct: 468 RGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIAS 527
Query: 73 GASDKSVILWEV 84
+ D SV +W++
Sbjct: 528 ASMDNSVRVWDI 539
>WB|WBGene00018625 [details] [associations]
symbol:prp-17 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0016246
"RNA interference" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0008406 GO:GO:0002119 GO:GO:0016246 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0042127 GO:GO:0040039 GO:GO:0007281
GO:GO:0040020 KO:K12816 HSSP:P16649 GO:GO:0040022 GO:GO:0001703
HOGENOM:HOG000214672 OMA:KRQKRGK GeneTree:ENSGT00530000063583
EMBL:FO081424 PIR:T37202 RefSeq:NP_492851.1
ProteinModelPortal:O44729 SMR:O44729 STRING:O44729 PaxDb:O44729
EnsemblMetazoa:F49D11.1 GeneID:172999 KEGG:cel:CELE_F49D11.1
UCSC:F49D11.1 CTD:172999 WormBase:F49D11.1 InParanoid:O44729
NextBio:877857 Uniprot:O44729
Length = 567
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 61/244 (25%), Positives = 112/244 (45%)
Query: 29 LTCGSDKKIKLWNPY-RNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 87
L+C D KIKLW Y R +++TY GH V + + ++ S + D+ V LW+ TG
Sbjct: 292 LSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSASFDRYVKLWDTETG 351
Query: 88 QPVRRWREHASKVT-CVKFNEDSS---VVISGSQDNTVMMWDVKS--------RSHHPIQ 135
Q +R+ H V C+K++ D + + G Q+ ++ WD +S R +
Sbjct: 352 QVKQRF--HTGHVPYCLKYHPDDDKNHMFLVGMQNKKIIQWDSRSGEIVQEYDRHLQAVN 409
Query: 136 CCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS 191
++ F +SD K I++W++ VD+ LI +VG + ++ P K ++
Sbjct: 410 SITFFDKNRRFASTSDDKSVRIWEWEIPVDTK----LIQNVGLHAIPTMTKSPNDKWVVG 465
Query: 192 AC-GNNVKLWTAEED---YGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGEL-LEEY 246
C N + L+ +D + ++ C + S D+ + A G+L + ++
Sbjct: 466 QCMDNRIVLFQLVDDKLRFSKKKAFRGHNAAGYACNIDFSPDQSFLISGDADGKLFIWDW 525
Query: 247 KGHK 250
+ HK
Sbjct: 526 RTHK 529
>UNIPROTKB|E1C4U3 [details] [associations]
symbol:E1C4U3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0005669
"transcription factor TFIID complex" evidence=IEA] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:ERQNNQI EMBL:AADN02030830
EMBL:AADN02030831 IPI:IPI00579493 ProteinModelPortal:E1C4U3
Ensembl:ENSGALT00000013413 Uniprot:E1C4U3
Length = 780
Score = 194 (73.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 53/199 (26%), Positives = 87/199 (43%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D +Y L+C D ++LW+ L Y GH + V D + SG
Sbjct: 524 GPVYGTSFSPDRNYLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG 583
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + VTC +F+ +S+ + +GS D TV +WDV + +
Sbjct: 584 GHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTVRLWDVLNGNCVR 643
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSH 183
H PI S + + G++DG++ W + + L H+ + S
Sbjct: 644 IFTGHKGPIHSLAFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHT--DTIYALRFSR 701
Query: 184 PTRKHIMSACGNNVKLWTA 202
+ N V+LW A
Sbjct: 702 DGEILASGSMDNTVRLWDA 720
Score = 161 (61.7 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 42/167 (25%), Positives = 78/167 (46%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +V
Sbjct: 555 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTR 614
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ IA+G++D++V LW+V G VR + H + + F+ + + +G+ D V+
Sbjct: 615 FHPNSNYIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDGRVL 674
Query: 123 MWDV-------KSRSH-HPIQCCLDSKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H I S+D +I GS D + W V
Sbjct: 675 LWDIGHGLMVGELKGHTDTIYALRFSRDGEILASGSMDNTVRLWDAV 721
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 189 (71.6 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 62/281 (22%), Positives = 115/281 (40%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
++ +C + ++ + + W S ST+ + G S P
Sbjct: 264 ATK-----ECKAELREHEHVV-----ECISW--APESSYSTISEATGSETKKS--GKPGP 309
Query: 187 KHIMSACGNNVKLWTAEEDY------GQEPIV-DACFTRDCQCILTCSTDECLRLFDKAT 239
+ + +K+W G + V F + IL+C+ D+ LR++D
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDFKN 369
Query: 240 GELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 280
++ H+ F + GS D + W+
Sbjct: 370 KRCMKTLNAHEH--FVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 148 (57.2 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSTISEATGSETKKSGKPGPFLLSGSRDKTIKMWDISTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDFKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 49/201 (24%), Positives = 84/201 (41%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV-VISGSQDNTV 121
D + IAS ++D++V +W V T + REH V C+ + +SS IS + +
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISEATGSET 301
Query: 122 MMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSL 180
KS P + GS D I W + + TL+ H V +
Sbjct: 302 K----KSGKPGPF----------LLSGSRDKTIKMWDISTGMCLMTLVGHDNW---VRGV 344
Query: 181 CSHPTRKHIMSACGNN-VKLW 200
H K I+S + +++W
Sbjct: 345 LFHSGGKFILSCADDKTLRVW 365
Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDF 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHTGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>RGD|1311332 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0004402
"histone acetyltransferase activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005669 "transcription factor TFIID complex"
evidence=IEA;ISO] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0015629 "actin cytoskeleton"
evidence=IEA;ISO] [GO:0016573 "histone acetylation" evidence=ISO]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA;ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0046983 "protein dimerization
activity" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 RGD:1311332 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212 GO:GO:0006367
GO:GO:0004402 GO:GO:0005669 EMBL:CH473986 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
OrthoDB:EOG469QW7 IPI:IPI00361559 RefSeq:NP_001099835.1
UniGene:Rn.144813 Ensembl:ENSRNOT00000027482 GeneID:294018
KEGG:rno:294018 UCSC:RGD:1311332 NextBio:637428 Uniprot:D3ZH66
Length = 798
Score = 192 (72.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 56/202 (27%), Positives = 91/202 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D +Y L+ D ++LW+ L Y GH + V D + SG
Sbjct: 542 GPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG 601
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV + +
Sbjct: 602 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 661
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS-H 183
H PI S + + G++DG++ W + + L K +++CS
Sbjct: 662 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-----KGHTDTVCSLR 716
Query: 184 PTRKHIMSACG---NNVKLWTA 202
+R + A G N V+LW A
Sbjct: 717 FSRDGEILASGSMDNTVRLWDA 738
Score = 174 (66.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +VN
Sbjct: 573 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR 632
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ +A+G++D++V LW+V G VR + H + + F+ + + +G+ D V+
Sbjct: 633 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 692
Query: 123 MWDV-------KSRSHHPIQCCLD-SKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H C L S+D +I GS D + W +
Sbjct: 693 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAI 739
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 71/280 (25%), Positives = 120/280 (42%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
DSS IA G +D +V +W VT + +R ++ AS ++ + +++S V+ D +
Sbjct: 479 DSSLIAGGFADSTVRVWSVTP-KKLRSVKQ-ASDLSLI--DKESDDVLERIMDEKTAS-E 533
Query: 126 VKSRSHH--PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGK--AVVNSL 180
+K H P+ S D SS DG + W L + L+ G V ++
Sbjct: 534 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL---QTFTCLVGYKGHNYPVWDTQ 590
Query: 181 CSHPTRKHIMSACGNNV-KLWTAEEDYGQEPI-VDACFTRDCQC---------ILTCSTD 229
S P + +S + V +LW A + Y +P+ + A D C + T S D
Sbjct: 591 FS-PYGYYFVSGGHDRVARLW-ATDHY--QPLRIFAGHLADVNCTRFHPNSNYVATGSAD 646
Query: 230 ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIS 288
+RL+D G + + GHK I S + + G++DG++ W + +
Sbjct: 647 RTVRLWDVLNGNCVRIFTGHKGP---IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVG 703
Query: 289 TLIHSVGKAVVNSLCS-HPTRKHIMSACG---NNVKLWTA 324
L K +++CS +R + A G N V+LW A
Sbjct: 704 EL-----KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 738
>UNIPROTKB|E1BEN8 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IEA] [GO:0005669 "transcription factor TFIID
complex" evidence=IEA] [GO:0004402 "histone acetyltransferase
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 GO:GO:0044212 GO:GO:0006367 GO:GO:0004402
GO:GO:0005669 GO:GO:0033276 GeneTree:ENSGT00700000104377 KO:K03130
CTD:6877 OMA:ERQNNQI EMBL:DAAA02059036 IPI:IPI00698152
RefSeq:NP_001178407.1 UniGene:Bt.59287 ProteinModelPortal:E1BEN8
Ensembl:ENSBTAT00000012808 GeneID:516001 KEGG:bta:516001
NextBio:20872090 Uniprot:E1BEN8
Length = 800
Score = 192 (72.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 56/202 (27%), Positives = 91/202 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D +Y L+ D ++LW+ L Y GH + V D + SG
Sbjct: 544 GPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG 603
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV + +
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS-H 183
H PI S + + G++DG++ W + + L K +++CS
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-----KGHTDTVCSLR 718
Query: 184 PTRKHIMSACG---NNVKLWTA 202
+R + A G N V+LW A
Sbjct: 719 FSRDGEILASGSMDNTVRLWDA 740
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 34/114 (29%), Positives = 64/114 (56%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ RF+ + +Y T +D+ ++LW+ ++ + GH ++ T + + +A+GA+
Sbjct: 630 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGAT 689
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD-VKS 128
D V+LW++ G V + H V ++F+ D ++ SGS DNTV +WD VK+
Sbjct: 690 DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 743
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +VN
Sbjct: 575 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR 634
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ +A+G++D++V LW+V G VR + H + + F+ + + +G+ D V+
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 123 MWDV-------KSRSHHPIQCCLD-SKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H C L S+D +I GS D + W V
Sbjct: 695 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAV 741
>UNIPROTKB|Q15542 [details] [associations]
symbol:TAF5 "Transcription initiation factor TFIID subunit
5" species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0005669
"transcription factor TFIID complex" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004402 "histone acetyltransferase activity"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA;IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=IDA] [GO:0016568 "chromatin modification"
evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0015629 "actin
cytoskeleton" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0016573 "histone
acetylation" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_116125 GO:GO:0019048 GO:GO:0016032
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 EMBL:CH471066 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003700
GO:GO:0046983 GO:GO:0044212 GO:GO:0006368 EMBL:AL591408
GO:GO:0006367 Reactome:REACT_1788 GO:GO:0005669 GO:GO:0033276
HOVERGEN:HBG050226 KO:K03130 CTD:6877 OMA:ERQNNQI EMBL:X95525
EMBL:U75309 EMBL:U80191 EMBL:AK223615 EMBL:AK291229 EMBL:BC052268
EMBL:BC136340 EMBL:BC136348 IPI:IPI00298925 IPI:IPI00298926
RefSeq:NP_008882.2 UniGene:Hs.96103 PDB:2NXP PDBsum:2NXP
ProteinModelPortal:Q15542 SMR:Q15542 DIP:DIP-28150N IntAct:Q15542
STRING:Q15542 PhosphoSite:Q15542 DMDM:78103206 PaxDb:Q15542
PRIDE:Q15542 Ensembl:ENST00000351396 Ensembl:ENST00000369839
GeneID:6877 KEGG:hsa:6877 UCSC:uc001kwv.3 UCSC:uc010qqq.2
GeneCards:GC10P105117 HGNC:HGNC:11539 HPA:HPA006195 HPA:HPA006474
MIM:601787 neXtProt:NX_Q15542 PharmGKB:PA36314 InParanoid:Q15542
OrthoDB:EOG469QW7 PhylomeDB:Q15542 EvolutionaryTrace:Q15542
GenomeRNAi:6877 NextBio:26855 Bgee:Q15542 CleanEx:HS_TAF5
Genevestigator:Q15542 GermOnline:ENSG00000148835 Uniprot:Q15542
Length = 800
Score = 192 (72.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 56/202 (27%), Positives = 91/202 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D +Y L+ D ++LW+ L Y GH + V D + SG
Sbjct: 544 GPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG 603
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV + +
Sbjct: 604 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 663
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS-H 183
H PI S + + G++DG++ W + + L K +++CS
Sbjct: 664 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-----KGHTDTVCSLR 718
Query: 184 PTRKHIMSACG---NNVKLWTA 202
+R + A G N V+LW A
Sbjct: 719 FSRDGEILASGSMDNTVRLWDA 740
Score = 174 (66.3 bits), Expect = 4.8e-10, P = 4.8e-10
Identities = 42/167 (25%), Positives = 80/167 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +VN
Sbjct: 575 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR 634
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ +A+G++D++V LW+V G VR + H + + F+ + + +G+ D V+
Sbjct: 635 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 694
Query: 123 MWDV-------KSRSHHPIQCCLD-SKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H C L S+D +I GS D + W +
Sbjct: 695 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAI 741
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 71/280 (25%), Positives = 120/280 (42%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
DSS IA G +D +V +W VT + +R ++ AS ++ + +++S V+ D +
Sbjct: 481 DSSLIAGGFADSTVRVWSVTP-KKLRSVKQ-ASDLSLI--DKESDDVLERIMDEKTAS-E 535
Query: 126 VKSRSHH--PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGK--AVVNSL 180
+K H P+ S D SS DG + W L + L+ G V ++
Sbjct: 536 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL---QTFTCLVGYKGHNYPVWDTQ 592
Query: 181 CSHPTRKHIMSACGNNV-KLWTAEEDYGQEPI-VDACFTRDCQC---------ILTCSTD 229
S P + +S + V +LW A + Y +P+ + A D C + T S D
Sbjct: 593 FS-PYGYYFVSGGHDRVARLW-ATDHY--QPLRIFAGHLADVNCTRFHPNSNYVATGSAD 648
Query: 230 ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIS 288
+RL+D G + + GHK I S + + G++DG++ W + +
Sbjct: 649 RTVRLWDVLNGNCVRIFTGHKGP---IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVG 705
Query: 289 TLIHSVGKAVVNSLCS-HPTRKHIMSACG---NNVKLWTA 324
L K +++CS +R + A G N V+LW A
Sbjct: 706 EL-----KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 740
>UNIPROTKB|E2RE41 [details] [associations]
symbol:TAF5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0033276 "transcription factor TFTC
complex" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=IEA] [GO:0005669 "transcription
factor TFIID complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015629
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003700 GO:GO:0044212
GO:GO:0006367 GO:GO:0004402 GO:GO:0005669 GO:GO:0033276
GeneTree:ENSGT00700000104377 KO:K03130 CTD:6877 OMA:ERQNNQI
EMBL:AAEX03015497 RefSeq:XP_003433663.1 Ensembl:ENSCAFT00000016513
GeneID:100688981 KEGG:cfa:100688981 Uniprot:E2RE41
Length = 801
Score = 192 (72.6 bits), Expect = 4.3e-12, P = 4.3e-12
Identities = 56/202 (27%), Positives = 91/202 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D +Y L+ D ++LW+ L Y GH + V D + SG
Sbjct: 545 GPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG 604
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + V C +F+ +S+ V +GS D TV +WDV + +
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS-H 183
H PI S + + G++DG++ W + + L K +++CS
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-----KGHTDTVCSLR 719
Query: 184 PTRKHIMSACG---NNVKLWTA 202
+R + A G N V+LW A
Sbjct: 720 FSRDGEILASGSMDNTVRLWDA 741
Score = 185 (70.2 bits), Expect = 2.7e-11, P = 2.7e-11
Identities = 34/114 (29%), Positives = 64/114 (56%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ RF+ + +Y T +D+ ++LW+ ++ + GH ++ T + + +A+GA+
Sbjct: 631 VNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGAT 690
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD-VKS 128
D V+LW++ G V + H V ++F+ D ++ SGS DNTV +WD VK+
Sbjct: 691 DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +VN
Sbjct: 576 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR 635
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ +A+G++D++V LW+V G VR + H + + F+ + + +G+ D V+
Sbjct: 636 FHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 123 MWDV-------KSRSHHPIQCCLD-SKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H C L S+D +I GS D + W V
Sbjct: 696 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAV 742
>UNIPROTKB|G4MUR7 [details] [associations]
symbol:MGG_08829 "Transcriptional repressor rco-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CM001232
KO:K06666 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
RefSeq:XP_003713847.1 ProteinModelPortal:G4MUR7 SMR:G4MUR7
EnsemblFungi:MGG_08829T0 GeneID:2679815 KEGG:mgr:MGG_08829
Uniprot:G4MUR7
Length = 607
Score = 190 (71.9 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 67/267 (25%), Positives = 116/267 (43%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
IR+V F+ DG Y T DK+I++W+ + + GH ++ A D IASG+
Sbjct: 349 IRSVCFSPDGKYLATGAEDKQIRVWDITTRTIRIQFAGHEQDIYSLDFARDGRTIASGSG 408
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D++V LW++ G + + VT V + D+ V +GS D +V +WD+ P++
Sbjct: 409 DRTVRLWDIENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKSVRVWDLTQGC--PVE 465
Query: 136 CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP--TRKHIMSAC 193
L+ D G D +Y + + + S+ K + + P ++ S
Sbjct: 466 R-LEGPD-----GHKDS-VYSVAFSPNGR-DLVTGSLDKTIKLWELATPRGNMQNQGSKG 517
Query: 194 GNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGD 253
G VK + D+ ++ T D Q +++ S D ++ +D TG +GHK+
Sbjct: 518 GRCVKTFEGHRDF----VLSVALTPDNQWVMSGSKDRGVQFWDPRTGSTQLMLQGHKNSV 573
Query: 254 FRIECCLDSKDSQIFC-GSSDGKIYKW 279
+ S F GS D + W
Sbjct: 574 ISVA---PSPTGGFFATGSGDMRARIW 597
>UNIPROTKB|Q5I0B4 [details] [associations]
symbol:mlst8 "Target of rapamycin complex subunit lst8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005737
"cytoplasm" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 KO:K08266
CTD:64223 HOGENOM:HOG000208395 HOVERGEN:HBG054763 OrthoDB:EOG4TXBS3
EMBL:CR760803 EMBL:BC088512 RefSeq:NP_001011443.1 UniGene:Str.15148
ProteinModelPortal:Q5I0B4 STRING:Q5I0B4 GeneID:496930
KEGG:xtr:496930 Xenbase:XB-GENE-981763 InParanoid:Q5I0B4
Bgee:Q5I0B4 Uniprot:Q5I0B4
Length = 326
Score = 140 (54.3 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 30 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 89
T G D ++ W + + +T +VN D S IA+ A + + ++++ + P
Sbjct: 17 TAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAA-AGYQHIRMYDLNSNNP 75
Query: 90 --VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---------HHPIQCC- 137
V + + +T V F+ED + +G +D +WD++SR+ + PI C
Sbjct: 76 NPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVF 135
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNN 196
L +++ G G I+ W L + Q LI ++ NS+ P ++ + N
Sbjct: 136 LHPNQAELIVGDQSGAIHIWDL-KTDQNEQLIPETDVSI-NSVHIDPDASYMAAVNSSGN 193
Query: 197 VKLWTAEEDYGQE 209
+W G++
Sbjct: 194 CFVWNLTGGLGED 206
Score = 87 (35.7 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 213 DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
D F+ D Q I+T S+D RL+ TGE+ EY GH+ + CL DS
Sbjct: 275 DCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQ----KAVVCLAFNDS 323
Score = 80 (33.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 33/165 (20%), Positives = 67/165 (40%)
Query: 59 NDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 118
N T D +A+ D +V W+ +G R + S+V ++ D S++ +
Sbjct: 4 NQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQ 63
Query: 119 NTVMMWDVKSRSHHPI------QCCLDS----KDSQ-IFCGSSDGKIYKWQLVDSSQIST 167
+ + M+D+ S + +P+ + S +D + ++ G D W L +
Sbjct: 64 H-IRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQ 122
Query: 168 LIHSVGKAVVNSLCSHPTRKH-IMSACGNNVKLWTAEEDYGQEPI 211
I V A +N + HP + I+ + +W + D ++ I
Sbjct: 123 RIFQVN-APINCVFLHPNQAELIVGDQSGAIHIWDLKTDQNEQLI 166
Score = 76 (31.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 22/112 (19%), Positives = 49/112 (43%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWN-PYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
I +V F+ DG + T G D ++W+ RNL + +N + +++ G
Sbjct: 88 ITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVFLHPNQAELIVGD 147
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
++ +W++ T Q + E + V + D+S + + + +W++
Sbjct: 148 QSGAIHIWDLKTDQNEQLIPETDVSINSVHIDPDASYMAAVNSSGNCFVWNL 199
>UNIPROTKB|Q6PA72 [details] [associations]
symbol:mlst8 "Target of rapamycin complex subunit lst8"
species:8355 "Xenopus laevis" [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 KO:K08266 CTD:64223 HOVERGEN:HBG054763
EMBL:BC060429 RefSeq:NP_001083382.1 UniGene:Xl.19213
ProteinModelPortal:Q6PA72 IntAct:Q6PA72 GeneID:398895
KEGG:xla:398895 Xenbase:XB-GENE-981769 Uniprot:Q6PA72
Length = 326
Score = 140 (54.3 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 43/193 (22%), Positives = 83/193 (43%)
Query: 30 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 89
T G D ++ W + + +T +VN D S IA+ A + + ++++ + P
Sbjct: 17 TAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAA-AGYQHIRMYDLNSNNP 75
Query: 90 --VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS---------HHPIQCC- 137
V + + +T V F+ED + +G +D +WD++SR+ + PI C
Sbjct: 76 NPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVF 135
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNN 196
L +++ G G I+ W L + Q LI ++ NS+ P ++ + N
Sbjct: 136 LHPNQAELIVGDQSGAIHIWDL-KTDQNEQLIPETDVSI-NSVHIDPDASYMAAVNSSGN 193
Query: 197 VKLWTAEEDYGQE 209
+W G++
Sbjct: 194 CFVWNLTGGLGED 206
Score = 87 (35.7 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 213 DACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDS 265
D F+ D Q I+T S+D RL+ TGE+ EY GH+ + CL DS
Sbjct: 275 DCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQ----KAVVCLAFNDS 323
Score = 76 (31.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 22/112 (19%), Positives = 49/112 (43%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWN-PYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
I +V F+ DG + T G D ++W+ RNL + +N + +++ G
Sbjct: 88 ITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVFLHPNQAELIVGD 147
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
++ +W++ T Q + E + V + D+S + + + +W++
Sbjct: 148 QSGAIHIWDLKTDQNEQLIPETDVSINSVHIDPDASYMAAVNSSGNCFVWNL 199
Score = 74 (31.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 32/162 (19%), Positives = 66/162 (40%)
Query: 62 TAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
T D +A+ D +V W+ +G R + S+V ++ D S++ + + +
Sbjct: 7 TVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQH-I 65
Query: 122 MMWDVKSRSHHPI------QCCLDS----KDSQ-IFCGSSDGKIYKWQLVDSSQISTLIH 170
M+D+ S + +P+ + S +D + ++ G D W L + I
Sbjct: 66 RMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIF 125
Query: 171 SVGKAVVNSLCSHPTRKH-IMSACGNNVKLWTAEEDYGQEPI 211
V A +N + HP + I+ + +W + D ++ I
Sbjct: 126 QVN-APINCVFLHPNQAELIVGDQSGAIHIWDLKTDQNEQLI 166
>WB|WBGene00006481 [details] [associations]
symbol:plrg-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0018996 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0000003 HSSP:P16649 EMBL:Z73970
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:Z74030
GeneID:179500 KEGG:cel:CELE_D1054.15 CTD:179500 PIR:T19550
RefSeq:NP_001256259.1 ProteinModelPortal:G5EEL2 SMR:G5EEL2
EnsemblMetazoa:D1054.15a WormBase:D1054.15a NextBio:905670
Uniprot:G5EEL2
Length = 494
Score = 188 (71.2 bits), Expect = 5.4e-12, P = 5.4e-12
Identities = 50/196 (25%), Positives = 85/196 (43%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +RAV + + G+D+ IK+W+ L + GH V + + SG
Sbjct: 185 GWVRAVDVEPGNQWFASGGADRIIKIWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSG 244
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H 131
DK V W++ + +R + H S V + + V+++ ++D+T +WD+++++ H
Sbjct: 245 GEDKQVKCWDLEYNKVIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVH 304
Query: 132 ----HP---IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
H S D Q+ S D + W L + TL H K V +L HP
Sbjct: 305 CFAGHTNTVADVVCQSVDPQVITASHDATVRLWDLAAGRSMCTLTHH--KKSVRALTIHP 362
Query: 185 TRKHIMSACGNNVKLW 200
SA +N+K W
Sbjct: 363 RLNMFASASPDNIKQW 378
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 45/183 (24%), Positives = 69/183 (37%)
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED- 205
G +D I W L +L + V ++ P + S + VK W E +
Sbjct: 202 GGADRIIKIWDLASGQLKLSLTGHISS--VRAVKVSPRHPFLFSGGEDKQVKCWDLEYNK 259
Query: 206 -----YGQEPIVDACFTR-DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECC 259
+G V A ++TC+ D R++D T + + GH + + C
Sbjct: 260 VIRHYHGHLSAVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVC- 318
Query: 260 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV 319
S D Q+ S D + W L + TL H K V +L HP SA +N+
Sbjct: 319 -QSVDPQVITASHDATVRLWDLAAGRSMCTLTHH--KKSVRALTIHPRLNMFASASPDNI 375
Query: 320 KLW 322
K W
Sbjct: 376 KQW 378
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 189 (71.6 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 73/307 (23%), Positives = 126/307 (41%)
Query: 29 LTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 87
L GSD +K+W + ++ T GH V + + I SG++D++V +W G
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 88 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDS 140
+ + H S V C+ S++++GS+D T+ +WDV+S HH C+
Sbjct: 329 SLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Query: 141 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGNNVKL 199
+ + G D + W I TL + V SL R + S + ++++
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR--VYSLLFESERSIVCSGSLDTSIRV 444
Query: 200 WTAEEDYGQEPIV----DACFTRDCQC----ILTCSTDECLRLFDKATGELLEEYKGHKS 251
W GQE + T Q +++C+ D +R++D G + GH+S
Sbjct: 445 WDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRS 504
Query: 252 GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI--HSVGKA-VVNSLCSHPTR 308
++ + + S DG + W + + I L+ S G + LCS T
Sbjct: 505 AITSLQWF---GRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTST- 560
Query: 309 KHIMSAC 315
M AC
Sbjct: 561 ---MLAC 564
Score = 165 (63.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 60/258 (23%), Positives = 111/258 (43%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + + + G Y ++ +D+ +K+W+ LL T GH V A S + +G
Sbjct: 297 GGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTG 354
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------VK 127
+ D ++ +W+V +G+ + H + V CV+F D + V+SG D TV +W+ ++
Sbjct: 355 SRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 128 SRSHHP--IQCCLDSKDSQIFC-GSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNSLCS 182
+ + H + L + I C GS D I W + + L+ G + S
Sbjct: 413 TLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ--GHTSLTS--G 468
Query: 183 HPTRKHIMSACG--NNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRL 234
R +I+ +C ++V++W E G + + + T S D ++L
Sbjct: 469 MQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKL 528
Query: 235 FDKATGELLEEYKGHKSG 252
+D G L+ + SG
Sbjct: 529 WDIERGALIRDLVTLDSG 546
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/232 (23%), Positives = 93/232 (40%)
Query: 13 QGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
QG VR + GS +T D +++W+ L T GH V D + +
Sbjct: 335 QGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR--CVQFDGTTVV 392
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
SG D +V +W TG+ +R H ++V + F + S+V SGS D ++ +WD
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEG 452
Query: 129 -------RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
+ H + + + + + ++D + W + + + + L S ++ + SL
Sbjct: 453 QECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHML--SGHRSAITSLQ 510
Query: 182 SHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILT-CSTDECL 232
S+ VKLW E +V + CI CST L
Sbjct: 511 WFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTSTML 562
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 65/287 (22%), Positives = 117/287 (40%)
Query: 64 ACDSSQIASGASDKSVILWEVTT--GQPVRRWRE-HASKVTCVKFNEDSSVVISGSQDNT 120
A D S+ +DK W G V R E H +TC++ ++D V+++GS DNT
Sbjct: 224 AADKSRYLR--ADKIEKNWNANPIMGSAVLRGHEDHV--ITCMQIHDD--VLVTGSDDNT 277
Query: 121 VMMWDV-KSRSHHPIQC----CLDSKDSQ----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
+ +W + K + + S+ SQ I GS+D + W VD S L+H+
Sbjct: 278 LKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS----LLHT 333
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED------YGQEPIVDACFTRDCQCIL 224
+ C +++ + +++W E +G V C D ++
Sbjct: 334 LQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAV-RCVQFDGTTVV 392
Query: 225 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLV- 282
+ D +++++ TG + GH + R+ L + I C GS D I W
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNN---RVYSLLFESERSIVCSGSLDTSIRVWDFTR 449
Query: 283 -DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAEE 326
+ + L+ G + S R +I+ +C ++V++W E
Sbjct: 450 PEGQECVALLQ--GHTSLTS--GMQLRGNILVSCNADSHVRVWDIHE 492
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 189 (71.6 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 73/307 (23%), Positives = 126/307 (41%)
Query: 29 LTCGSDKK-IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 87
L GSD +K+W + ++ T GH V + + I SG++D++V +W G
Sbjct: 269 LVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDG 328
Query: 88 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDS 140
+ + H S V C+ S++++GS+D T+ +WDV+S HH C+
Sbjct: 329 SLLHTLQGHTSTVRCMAMA--GSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF 386
Query: 141 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMS-ACGNNVKL 199
+ + G D + W I TL + V SL R + S + ++++
Sbjct: 387 DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNNR--VYSLLFESERSIVCSGSLDTSIRV 444
Query: 200 WTAEEDYGQEPIV----DACFTRDCQC----ILTCSTDECLRLFDKATGELLEEYKGHKS 251
W GQE + T Q +++C+ D +R++D G + GH+S
Sbjct: 445 WDFTRPEGQECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRS 504
Query: 252 GDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI--HSVGKA-VVNSLCSHPTR 308
++ + + S DG + W + + I L+ S G + LCS T
Sbjct: 505 AITSLQWF---GRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTST- 560
Query: 309 KHIMSAC 315
M AC
Sbjct: 561 ---MLAC 564
Score = 165 (63.1 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 60/258 (23%), Positives = 111/258 (43%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + + + G Y ++ +D+ +K+W+ LL T GH V A S + +G
Sbjct: 297 GGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVRCMAMA--GSILVTG 354
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------VK 127
+ D ++ +W+V +G+ + H + V CV+F D + V+SG D TV +W+ ++
Sbjct: 355 SRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIR 412
Query: 128 SRSHHP--IQCCLDSKDSQIFC-GSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNSLCS 182
+ + H + L + I C GS D I W + + L+ G + S
Sbjct: 413 TLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ--GHTSLTS--G 468
Query: 183 HPTRKHIMSACG--NNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRL 234
R +I+ +C ++V++W E G + + + T S D ++L
Sbjct: 469 MQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDGTVKL 528
Query: 235 FDKATGELLEEYKGHKSG 252
+D G L+ + SG
Sbjct: 529 WDIERGALIRDLVTLDSG 546
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/232 (23%), Positives = 93/232 (40%)
Query: 13 QGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
QG VR + GS +T D +++W+ L T GH V D + +
Sbjct: 335 QGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVR--CVQFDGTTVV 392
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
SG D +V +W TG+ +R H ++V + F + S+V SGS D ++ +WD
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEG 452
Query: 129 -------RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
+ H + + + + + ++D + W + + + + L S ++ + SL
Sbjct: 453 QECVALLQGHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHML--SGHRSAITSLQ 510
Query: 182 SHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILT-CSTDECL 232
S+ VKLW E +V + CI CST L
Sbjct: 511 WFGRNMVATSSDDGTVKLWDIERGALIRDLVTLDSGGNGGCIWRLCSTSTML 562
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 65/287 (22%), Positives = 117/287 (40%)
Query: 64 ACDSSQIASGASDKSVILWEVTT--GQPVRRWRE-HASKVTCVKFNEDSSVVISGSQDNT 120
A D S+ +DK W G V R E H +TC++ ++D V+++GS DNT
Sbjct: 224 AADKSRYLR--ADKIEKNWNANPIMGSAVLRGHEDHV--ITCMQIHDD--VLVTGSDDNT 277
Query: 121 VMMWDV-KSRSHHPIQC----CLDSKDSQ----IFCGSSDGKIYKWQLVDSSQISTLIHS 171
+ +W + K + + S+ SQ I GS+D + W VD S L+H+
Sbjct: 278 LKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGS----LLHT 333
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED------YGQEPIVDACFTRDCQCIL 224
+ C +++ + +++W E +G V C D ++
Sbjct: 334 LQGHTSTVRCMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAV-RCVQFDGTTVV 392
Query: 225 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLV- 282
+ D +++++ TG + GH + R+ L + I C GS D I W
Sbjct: 393 SGGYDFTVKIWNAHTGRCIRTLTGHNN---RVYSLLFESERSIVCSGSLDTSIRVWDFTR 449
Query: 283 -DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAEE 326
+ + L+ G + S R +I+ +C ++V++W E
Sbjct: 450 PEGQECVALLQ--GHTSLTS--GMQLRGNILVSCNADSHVRVWDIHE 492
>TAIR|locus:2043929 [details] [associations]
symbol:AT2G43770 "AT2G43770" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE EMBL:AC002333 UniGene:At.66405 EMBL:AY093182
EMBL:BT008828 IPI:IPI00529336 PIR:C84870 RefSeq:NP_181905.1
ProteinModelPortal:O22826 SMR:O22826 IntAct:O22826 STRING:O22826
PaxDb:O22826 PRIDE:O22826 EnsemblPlants:AT2G43770.1 GeneID:818980
KEGG:ath:AT2G43770 TAIR:At2g43770 InParanoid:O22826
PhylomeDB:O22826 ProtClustDB:CLSN2683090 ArrayExpress:O22826
Genevestigator:O22826 Uniprot:O22826
Length = 343
Score = 184 (69.8 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 51/168 (30%), Positives = 82/168 (48%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPY---RN-LLLKTYGGHAHEVNDATAACDSSQI 70
A+ ++FN G+ + D++I LW + +N ++LK GH + + D D SQI
Sbjct: 55 AVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLK---GHKNAILDLHWTSDGSQI 111
Query: 71 ASGASDKSVILWEVTTGQPVRRWREHASKV-TCVKFNEDSSVVISGSQDNTVMMWDVKSR 129
S + DK+V W+V TG+ +++ EH+S V +C ++ISGS D T +WD++ R
Sbjct: 112 VSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQR 171
Query: 130 S-------HHPIQCCL--DSKDSQIFCGSSDGKIYKWQLVDSSQISTL 168
+ I D+ D +IF G D + W L TL
Sbjct: 172 GAIQTFPDKYQITAVSFSDAAD-KIFTGGVDNDVKVWDLRKGEATMTL 218
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 36/128 (28%), Positives = 65/128 (50%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWN--PY--RNLLLKTYGGHAHEVNDATA 63
T++ Q I + + DGSY LT G D K+ +W+ PY +N +K + GH H
Sbjct: 217 TLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLL 276
Query: 64 AC----DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDSSVVISGSQD 118
C D +++ +G+SD+ V +W+ T+ + + + H V CV F+ ++ S S D
Sbjct: 277 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECV-FHPTEPIIGSCSSD 335
Query: 119 NTVMMWDV 126
+ + ++
Sbjct: 336 KNIYLGEI 343
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 56/216 (25%), Positives = 84/216 (38%)
Query: 89 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW----DVKS----RSHHPIQCCLD- 139
P+ H S V +KFN +++ SGS D + +W D K+ + H LD
Sbjct: 45 PIMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHK--NAILDL 102
Query: 140 ---SKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKH---IMSA 192
S SQI S D + W + QI + HS + VNS C PTR+ I+S
Sbjct: 103 HWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHS---SFVNSCC--PTRRGPPLIISG 157
Query: 193 CGNNV-KLWTAEEDYGQEPIVD------ACFTRDCQCILTCSTDECLRLFDKATGELLEE 245
+ KLW + + D F+ I T D ++++D GE
Sbjct: 158 SDDGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 246 YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
+GH+ D L S + D K+ W +
Sbjct: 218 LEGHQ--DTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 27/116 (23%), Positives = 55/116 (47%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 71
+ AI + + DGS ++ DK ++ W+ +K H+ VN I
Sbjct: 96 KNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLII 155
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
SG+ D + LW++ ++ + + ++T V F++ + + +G DN V +WD++
Sbjct: 156 SGSDDGTAKLWDMRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLR 210
Score = 113 (44.8 bits), Expect = 0.00083, P = 0.00083
Identities = 33/132 (25%), Positives = 56/132 (42%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
+QT K I AV F+ T G D +K+W+ + T GH + + +
Sbjct: 174 IQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSP 232
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRW------REHASKVTCVK--FNEDSSVVISGSQ 117
D S + + D + +W++ P R +H + +K ++ D + V +GS
Sbjct: 233 DGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSS 292
Query: 118 DNTVMMWDVKSR 129
D V +WD SR
Sbjct: 293 DRMVHIWDTTSR 304
>DICTYBASE|DDB_G0287337 [details] [associations]
symbol:taf5 "TFIID subunit" species:44689
"Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0000124 "SAGA complex" evidence=ISS] [GO:0006413
"translational initiation" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0287337 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016568 GenomeReviews:CM000154_GR GO:GO:0006366
EMBL:AAFI02000100 GO:GO:0000124 GO:GO:0003743 GO:GO:0005669
KO:K03130 OMA:PNINYLA RefSeq:XP_637246.1 ProteinModelPortal:Q54KH7
STRING:Q54KH7 EnsemblProtists:DDB0231003 GeneID:8626077
KEGG:ddi:DDB_G0287337 InParanoid:Q54KH7 ProtClustDB:CLSZ2497147
Uniprot:Q54KH7
Length = 948
Score = 196 (74.1 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 62/229 (27%), Positives = 104/229 (45%)
Query: 19 VRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 78
V F+ G Y T D+ +LW L+ + GH + N + + +A+G++DKS
Sbjct: 727 VSFSPFGFYFATASHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKS 786
Query: 79 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD------VKSRSHH 132
LWE+ TG+ VR + H + + V F+ D ++ + +D +V++WD VK H
Sbjct: 787 ARLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGH 846
Query: 133 PIQCC--LD-SKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKH 188
+C LD S D I GSSD + W + ++ + + +++N RK
Sbjct: 847 T-KCVYSLDFSCDGSILASGSSDCTVRLWDV--KKAFNSSLSTQPSSLIND--ESRKRKT 901
Query: 189 IMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDK 237
+ S ++ L T Q P+ + CF+R +L L FDK
Sbjct: 902 LKSKLFSDELLETYPTK--QTPVYNVCFSRR-NLLLASGAFNTLTAFDK 947
Score = 148 (57.2 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 44/203 (21%), Positives = 82/203 (40%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D Y L+C D +LW+ L Y GH V D + + A+
Sbjct: 680 GPVYGCSFSPDSQYLLSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATA 739
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS----- 128
+ D++ LW P+R + H S V+F+ + + + +GS D + +W++++
Sbjct: 740 SHDRTARLWTTNHISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVR 799
Query: 129 --RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSH 183
H PI S D ++ D + W L ++ + H+ ++ C
Sbjct: 800 IFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDG 859
Query: 184 PTRKHIMSACGNNVKLWTAEEDY 206
S C V+LW ++ +
Sbjct: 860 SILASGSSDC--TVRLWDVKKAF 880
Score = 130 (50.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 59/256 (23%), Positives = 113/256 (44%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
G+ +E N +T A ++ + SG+S S L + + + H+ V F+ DS +
Sbjct: 637 GNNNENNKSTTA--NNNLNSGSSSSSNKLQKQQKESEFKTFLGHSGPVYGCSFSPDSQYL 694
Query: 113 ISGSQDNTVMMWDVKSRSH------H--PIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQ 164
+S S+D T +W +++ S+ H P+ S F +S + + L ++
Sbjct: 695 LSCSEDTTARLWSMETMSNLVCYKGHNFPVWDVSFSPFGFYFATASHDRTAR--LWTTNH 752
Query: 165 ISTLIHSVGK-AVVNSLCSHPTRKHIMSACGN-NVKLWTAEED------YGQE-PIVDAC 215
IS L G + N++ HP ++ + + + +LW + G PI
Sbjct: 753 ISPLRIFTGHLSDCNTVRFHPNINYLATGSNDKSARLWEIQTGKCVRIFMGHRAPIYTVA 812
Query: 216 FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGK 275
F+ D + + T D + L+D +TG+ +++ GH + ++ D S + GSSD
Sbjct: 813 FSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFSCDG--SILASGSSDCT 870
Query: 276 IYKWQLVDS--SQIST 289
+ W + + S +ST
Sbjct: 871 VRLWDVKKAFNSSLST 886
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV+ + I V F+ DG T G D + LW+ +K GH V +
Sbjct: 797 CVRIFMGHRAPIYTVAFSPDGRLLATAGEDTSVILWDLSTGKKVKKMDGHTKCVYSLDFS 856
Query: 65 CDSSQIASGASDKSVILWEV 84
CD S +ASG+SD +V LW+V
Sbjct: 857 CDGSILASGSSDCTVRLWDV 876
Score = 38 (18.4 bits), Expect = 6.0e-12, Sum P(2) = 6.0e-12
Identities = 11/38 (28%), Positives = 16/38 (42%)
Query: 5 CVQTI-DCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWN 41
C TI + QG + + D SD +K+WN
Sbjct: 550 CFYTIFNTYQG-LNTTDISKDAQLVAGGFSDSSVKIWN 586
>UNIPROTKB|E1BWK2 [details] [associations]
symbol:FBXW11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006470 "protein dephosphorylation" evidence=IEA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0031648 "protein destabilization"
evidence=IEA] [GO:0042347 "negative regulation of NF-kappaB import
into nucleus" evidence=IEA] [GO:0042753 "positive regulation of
circadian rhythm" evidence=IEA] [GO:0045862 "positive regulation of
proteolysis" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005829 GO:GO:0005634
GO:GO:0005813 GO:GO:0045892 GO:GO:0045893 GO:GO:0006470
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0004842 GO:GO:0045862
GO:GO:0000209 GO:GO:0031648 GO:GO:0042347 GO:GO:0031146
GO:GO:0042753 GeneTree:ENSGT00690000101849 OMA:FDQWSEA
EMBL:AADN02035964 EMBL:AADN02035965 EMBL:AADN02035966
IPI:IPI00818493 Ensembl:ENSGALT00000041199 ArrayExpress:E1BWK2
Uniprot:E1BWK2
Length = 523
Score = 188 (71.2 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 65/234 (27%), Positives = 115/234 (49%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM-MW 124
D +I SG D S+ +W+ T+ + ++ H V C++++E V+++GS D+TV +W
Sbjct: 229 DDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYDE--RVIVTGSSDSTVSRVW 286
Query: 125 DVKSRS------HHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-K 174
DV + HH + L + S + C S D I W + + I+ VG +
Sbjct: 287 DVNTGEVLNTLIHHN-EAVLHLRFSNGLMVTC-SKDRSIAVWDMASPTDITLRRVLVGHR 344
Query: 175 AVVNSLCSHPTRKHIMSACGNN-VKLW-TAEEDY-----GQEPIVDACFTRDCQCILTCS 227
A VN + K+I+SA G+ +K+W T+ ++ G + + AC + +++ S
Sbjct: 345 AAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI-ACLQYRDRLVVSGS 401
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
+D +RL+D G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 402 SDNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAYDGKIKVWDL 451
Score = 150 (57.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 31/116 (26%), Positives = 59/116 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 344 RAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--ACLQYRDRLVVS 399
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+SD ++ LW++ G +R H V C++F D+ ++SG+ D + +WD+++
Sbjct: 400 GSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLQA 453
Score = 134 (52.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 58/250 (23%), Positives = 103/250 (41%)
Query: 6 VQTIDCKQGAIRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
+Q I C+ + V D ++ D IK+W+ LK GH V
Sbjct: 210 LQRIQCRSENSKGVYCLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSV--LCLQ 267
Query: 65 CDSSQIASGASDKSVI-LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
D I +G+SD +V +W+V TG+ + H V ++F+ + ++++ S+D ++ +
Sbjct: 268 YDERVIVTGSSDSTVSRVWDVNTGEVLNTLIHHNEAVLHLRFS--NGLMVTCSKDRSIAV 325
Query: 124 WDVKSRS----------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSV 172
WD+ S + H +D D I S D I W + TL H
Sbjct: 326 WDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKR 385
Query: 173 GKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTC 226
G A + + R + + N ++LW E G E +V C D + I++
Sbjct: 386 GIACLQ----YRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV-RCIRFDNKRIVSG 440
Query: 227 STDECLRLFD 236
+ D ++++D
Sbjct: 441 AYDGKIKVWD 450
>CGD|CAL0005013 [details] [associations]
symbol:SWD3 species:5476 "Candida albicans" [GO:0048188
"Set1C/COMPASS complex" evidence=IEA] [GO:0042800 "histone
methyltransferase activity (H3-K4 specific)" evidence=IEA]
[GO:0051568 "histone H3-K4 methylation" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005013 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
RefSeq:XP_712497.1 ProteinModelPortal:Q59S83 STRING:Q59S83
GeneID:3645890 KEGG:cal:CaO19.3457 Uniprot:Q59S83
Length = 383
Score = 185 (70.2 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y TI+ A++F+ +G S+ KI ++N L+ T GH ++D
Sbjct: 16 YKIRYTINEPSITFTAIKFSPNGQNFACSSSNGKIYIYNTTTGKLITTLSGHTKGISDIV 75
Query: 63 -AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
+ +S+ +AS + D ++ LW +T + ++ R+H +T +KF + +++ISGS D T+
Sbjct: 76 YSPINSNILASCSDDLTIRLWNITQQRCIKLLRKHTYHITTLKFTQKGNILISGSSDETI 135
Query: 122 MMWDVKSR---------SHH-PIQC-CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 170
+WD+ S +H P+ L DS I S DG + + L S + TL +
Sbjct: 136 TIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDGLMRLFDLQTSQCLKTLTN 195
Query: 171 S 171
S
Sbjct: 196 S 196
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 185 (70.2 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 39/120 (32%), Positives = 64/120 (53%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F DG +T DK +K+W+ +R L + H + V A + D I S +
Sbjct: 106 VRSVHFCSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASD 165
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK+V LW+ T+ + + + EH VT V F+ + + + DNTV +WD +R+H +Q
Sbjct: 166 DKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWD--ARTHRLLQ 223
Score = 169 (64.5 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 73/305 (23%), Positives = 129/305 (42%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH V + ++ +ASG+ D ++++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTCVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 107 EDSSVVISGSQDNTVMMW--DVKS-----RSHHP-IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++ SGS+D TV +W +VK R+H ++ D Q +SD K K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK-- 128
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSH--PTRKHIMSACGNN-VKLW--TAEE---DYGQEP 210
V S+ + S+ + + C+ P + I+SA + VKLW T+ E Y +
Sbjct: 129 -VWSTHRQRFLFSLTQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHG 187
Query: 211 --IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ F CI D ++++D T LL+ Y+ H + + + +
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALS--FHPSGNYLI 245
Query: 269 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAE-- 325
SSD + L++ + TL G A ++ T ++ S + V +W +
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPAT--TVAFSRTGEYFASGGSDEQVMVWKSNFD 303
Query: 326 -EDYG 329
DYG
Sbjct: 304 IVDYG 308
Score = 136 (52.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 34/152 (22%), Positives = 69/152 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R +F+ DG ++ DK +KLW+ + +Y H V + IA+
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
D +V +W+ T + ++ ++ H++ V + F+ + +I+ S D+T+ + D+
Sbjct: 208 DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 129 RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQ 158
H P S+ + F G SD ++ W+
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWK 299
Score = 124 (48.7 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 29/121 (23%), Positives = 55/121 (45%)
Query: 5 CVQTIDCKQGA-IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
C+ + C+ G + V F+ G+ G D +K+W+ + LL+ Y H+ VN +
Sbjct: 179 CIHSY-CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHSAAVNALSF 237
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ + + +SD ++ + ++ G+ + H T V F+ SG D VM+
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 124 W 124
W
Sbjct: 298 W 298
>DICTYBASE|DDB_G0279507 [details] [associations]
symbol:plrg1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0279507 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005681 EMBL:AAFI02000031 GO:GO:0000398
KO:K12862 OMA:ITAEADK RefSeq:XP_641668.1 ProteinModelPortal:Q54WP9
STRING:Q54WP9 EnsemblProtists:DDB0233530 GeneID:8622076
KEGG:ddi:DDB_G0279507 InParanoid:Q54WP9 Uniprot:Q54WP9
Length = 516
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 50/204 (24%), Positives = 86/204 (42%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
++ I G +RA+ + + T +D IK+W+ L T GH + +
Sbjct: 200 MRVISGHTGWVRAIAVDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHVSAIRGLEVSS 259
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
+ S D V+ W++ + + VR + H V V + V+ SG +DN V +WD
Sbjct: 260 RHPYLFSVGEDNKVLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWD 319
Query: 126 VKSRS-------HHPIQCCLDSK--DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 176
+++R+ H L S+ D Q+ GS D + W L + +TL + K
Sbjct: 320 MRTRANIFEMKGHKGTILSLKSQNADPQVISGSMDTTVKLWDLATGTSAATLTNH--KKG 377
Query: 177 VNSLCSHPTRKHIMSACGNNVKLW 200
V S+ H + +N+K W
Sbjct: 378 VRSMVIHEKEYSFATGAADNIKQW 401
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 44/193 (22%), Positives = 74/193 (38%)
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN- 196
+D + GS+D I W L TL V + + L ++ S +N
Sbjct: 215 VDKSNEWFATGSTDNTIKVWDLASGELKVTLTGHV--SAIRGLEVSSRHPYLFSVGEDNK 272
Query: 197 VKLWTAEED------YG-QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
V W E + YG ++ + + + D C+R++D T + E KGH
Sbjct: 273 VLCWDLESNKQVRNYYGHRQGVYSVALHPTLDVLFSGGRDNCVRVWDMRTRANIFEMKGH 332
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 309
K ++ + D Q+ GS D + W L + +TL + K V S+ H
Sbjct: 333 KGTILSLKS--QNADPQVISGSMDTTVKLWDLATGTSAATLTNH--KKGVRSMVIHEKEY 388
Query: 310 HIMSACGNNVKLW 322
+ +N+K W
Sbjct: 389 SFATGAADNIKQW 401
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV------- 58
V+T + A++++ G +C D +K+W+ ++ + H+ E+
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 59 -NDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 116
AT+ +S+ +AS + D +V LW+V G + +H V V F+ D + SGS
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGS 474
Query: 117 QDNTVMMWDVKSRSH-HP-------IQCCLDSKDSQIFCGSSDGKI 154
D V +W+ +S S H + C +++ ++ +SDG +
Sbjct: 475 FDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 127 (49.8 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 30/129 (23%), Positives = 67/129 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ +G I A+++N G+Y L+ G DK +W+ + + + H+ D ++
Sbjct: 274 TLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NN 332
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ AS ++D + + + +PV+ ++ H ++V +K++ ++ S S D T+ +W +K
Sbjct: 333 TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 392
Query: 128 SRSH-HPIQ 135
+ H +Q
Sbjct: 393 QDACVHDLQ 401
Score = 107 (42.7 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 36/150 (24%), Positives = 69/150 (46%)
Query: 137 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS-VGKAVVNSLCSHPTRKHIMSACG- 194
C D +I+ D ++ Q S +I T+ S G A S+P ++++
Sbjct: 380 CSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSPTGPAT-----SNPNSNIMLASASF 433
Query: 195 -NNVKLWTAEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 246
+ V+LW E QEP+ F+ D + + + S D+C+ +++ +G L+ Y
Sbjct: 434 DSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSY 493
Query: 247 KGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
+G G F E C +++ ++ +SDG +
Sbjct: 494 RG-TGGIF--EVCWNARGDKVGASASDGSV 520
Score = 80 (33.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ ++ +N DG+ T D ++W NL T G H + + I S
Sbjct: 241 VTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNYILSAGV 299
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 118
DK+ I+W+ TG+ +++ H++ V + ++++ S S D
Sbjct: 300 DKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTD 341
Score = 64 (27.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
R H S+V +N S ++ SGS D+T +W++ S+
Sbjct: 179 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 216
Score = 59 (25.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILW---EVTTG---QPVRRW--RE--H---ASK 99
GH EV S +ASG+ D + +W E + G Q V R RE H ++K
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 100 -VTCVKFNEDSSVVISGSQDNTVMMW 124
VT + +N D +++ +GS D +W
Sbjct: 240 DVTSLDWNSDGTLLATGSYDGFARIW 265
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 141 (54.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/166 (23%), Positives = 76/166 (45%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV------- 58
V+T + A++++ G +C D +K+W+ ++ + H+ E+
Sbjct: 355 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSP 414
Query: 59 -NDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 116
AT+ +S+ +AS + D +V LW+V G + +H V V F+ D + SGS
Sbjct: 415 TGPATSNPNSNIMLASASFDSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGS 474
Query: 117 QDNTVMMWDVKSRSH-HP-------IQCCLDSKDSQIFCGSSDGKI 154
D V +W+ +S S H + C +++ ++ +SDG +
Sbjct: 475 FDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 520
Score = 127 (49.8 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 30/129 (23%), Positives = 67/129 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ +G I A+++N G+Y L+ G DK +W+ + + + H+ D ++
Sbjct: 274 TLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NN 332
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ AS ++D + + + +PV+ ++ H ++V +K++ ++ S S D T+ +W +K
Sbjct: 333 TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 392
Query: 128 SRSH-HPIQ 135
+ H +Q
Sbjct: 393 QDACVHDLQ 401
Score = 107 (42.7 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 36/150 (24%), Positives = 69/150 (46%)
Query: 137 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS-VGKAVVNSLCSHPTRKHIMSACG- 194
C D +I+ D ++ Q S +I T+ S G A S+P ++++
Sbjct: 380 CSDDMTLKIWSMKQDACVHDLQ-AHSKEIYTIKWSPTGPAT-----SNPNSNIMLASASF 433
Query: 195 -NNVKLWTAEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 246
+ V+LW E QEP+ F+ D + + + S D+C+ +++ +G L+ Y
Sbjct: 434 DSTVRLWDVERGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSY 493
Query: 247 KGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
+G G F E C +++ ++ +SDG +
Sbjct: 494 RG-TGGIF--EVCWNARGDKVGASASDGSV 520
Score = 80 (33.2 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ ++ +N DG+ T D ++W NL T G H + + I S
Sbjct: 241 VTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNYILSAGV 299
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 118
DK+ I+W+ TG+ +++ H++ V + ++++ S S D
Sbjct: 300 DKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTD 341
Score = 64 (27.6 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
R H S+V +N S ++ SGS D+T +W++ S+
Sbjct: 179 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 216
Score = 59 (25.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILW---EVTTG---QPVRRW--RE--H---ASK 99
GH EV S +ASG+ D + +W E + G Q V R RE H ++K
Sbjct: 180 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 239
Query: 100 -VTCVKFNEDSSVVISGSQDNTVMMW 124
VT + +N D +++ +GS D +W
Sbjct: 240 DVTSLDWNSDGTLLATGSYDGFARIW 265
>WB|WBGene00003009 [details] [associations]
symbol:lin-23 species:6239 "Caenorhabditis elegans"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0040015 "negative regulation of multicellular organism growth"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0048812 "neuron projection
morphogenesis" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 InterPro:IPR021977 Pfam:PF00400 Pfam:PF12125
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 SMART:SM01028 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0040010 GO:GO:0008285 GO:GO:0051301 GO:GO:0002119
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0010171 GO:GO:0040011 GO:GO:0048812 SUPFAM:SSF81383
GO:GO:0007049 GO:GO:0040035 GO:GO:0040015 EMBL:FO080748
HOGENOM:HOG000006638 KO:K03362 GeneTree:ENSGT00690000101849
EMBL:AF275253 PIR:T16607 RefSeq:NP_495285.1 UniGene:Cel.17632
ProteinModelPortal:Q09990 SMR:Q09990 STRING:Q09990 PaxDb:Q09990
EnsemblMetazoa:K10B2.1 GeneID:174058 KEGG:cel:CELE_K10B2.1
UCSC:K10B2.1 CTD:174058 WormBase:K10B2.1 InParanoid:Q09990
OMA:IKVWSMD NextBio:882327 Uniprot:Q09990
Length = 665
Score = 188 (71.2 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 66/233 (28%), Positives = 111/233 (47%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ R H V C+++ D+ V+ISGS D TV +WD
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWD 288
Query: 126 V------KSRSHHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V K+ HH + L + + + C S D I W +V I+ VG +A
Sbjct: 289 VETGECIKTLIHH-CEAVLHLRFANGIMVTC-SKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLWTAEE-DY-----GQEPIVDACFTRDCQCILTCST 228
VN + R +I+SA G+ +K+W+ + ++ G + AC + +++ S+
Sbjct: 347 AVN-VVDFDDR-YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI-ACLQYRGRLVVSGSS 403
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D +G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 404 DNTIRLWDIHSGVCLRVLEGHEE----LVRCIRFDEKRIVSGAYDGKIKVWDL 452
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/163 (26%), Positives = 77/163 (47%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 345 RAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQYRGRLVVS 400
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 132
G+SD ++ LW++ +G +R H V C++F+E ++SG+ D + +WD
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWD------- 451
Query: 133 PIQCCLDSK--DSQI-FCG--SSDGKIYKWQLVDSSQISTLIH 170
+Q LD + S+I C G++++ Q D QI + H
Sbjct: 452 -LQAALDPRALSSEICLCSLVQHTGRVFRLQF-DDFQIVSSSH 492
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 57/240 (23%), Positives = 98/240 (40%)
Query: 22 NVDGSYCLTCGSDK--------KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
N G YCL DK IK+W+ + GH V D+ I SG
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISG 278
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR---- 129
+SD +V +W+V TG+ ++ H V ++F + ++++ S+D ++ +WD+ S
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDIT 336
Query: 130 ------SHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
H +D D I S D I W + + TL H G A +
Sbjct: 337 IRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ---- 392
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ R + + N ++LW G E +V C D + I++ + D ++++D
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELV-RCIRFDEKRIVSGAYDGKIKVWD 451
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 71/293 (24%), Positives = 114/293 (38%)
Query: 34 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 93
D IK+W+ + GH V D+ I SG+SD +V +W+V TG+ ++
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTL 298
Query: 94 REHASKVTCVKFNEDSSVVISGSQD----NTVMMWDVKSR----SHHPIQCCLDSKDSQI 145
H V ++F V S + + V D+ R H +D D I
Sbjct: 299 IHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYI 358
Query: 146 FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 204
S D I W + + TL H G A + + R + + N ++LW
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ----YRGRLVVSGSSDNTIRLWDIHS 414
Query: 205 DY------GQEPIVDACFTRDCQCILTCSTDECLRLFD-------KA-TGEL-LEEYKGH 249
G E +V C D + I++ + D ++++D +A + E+ L H
Sbjct: 415 GVCLRVLEGHEELV-RCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQH 473
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSL 302
FR++ D D QI S D I W +D+ S L S +A + L
Sbjct: 474 TGRVFRLQ--FD--DFQIVSSSHDDTILIWDFLDAPP-SGLPSSTNRATLPEL 521
>UNIPROTKB|Q09990 [details] [associations]
symbol:lin-23 "F-box/WD repeat-containing protein lin-23"
species:6239 "Caenorhabditis elegans" [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 SMART:SM01028
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0008285
GO:GO:0051301 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0010171 GO:GO:0040011
GO:GO:0048812 SUPFAM:SSF81383 GO:GO:0007049 GO:GO:0040035
GO:GO:0040015 EMBL:FO080748 HOGENOM:HOG000006638 KO:K03362
GeneTree:ENSGT00690000101849 EMBL:AF275253 PIR:T16607
RefSeq:NP_495285.1 UniGene:Cel.17632 ProteinModelPortal:Q09990
SMR:Q09990 STRING:Q09990 PaxDb:Q09990 EnsemblMetazoa:K10B2.1
GeneID:174058 KEGG:cel:CELE_K10B2.1 UCSC:K10B2.1 CTD:174058
WormBase:K10B2.1 InParanoid:Q09990 OMA:IKVWSMD NextBio:882327
Uniprot:Q09990
Length = 665
Score = 188 (71.2 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 66/233 (28%), Positives = 111/233 (47%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D +I SG D ++ +W+ R H V C+++ D+ V+ISGS D TV +WD
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY--DNRVIISGSSDATVRVWD 288
Query: 126 V------KSRSHHPIQCCLDSKDSQ---IFCGSSDGKIYKWQLVDSSQISTLIHSVG-KA 175
V K+ HH + L + + + C S D I W +V I+ VG +A
Sbjct: 289 VETGECIKTLIHH-CEAVLHLRFANGIMVTC-SKDRSIAVWDMVSPRDITIRRVLVGHRA 346
Query: 176 VVNSLCSHPTRKHIMSACGNN-VKLWTAEE-DY-----GQEPIVDACFTRDCQCILTCST 228
VN + R +I+SA G+ +K+W+ + ++ G + AC + +++ S+
Sbjct: 347 AVN-VVDFDDR-YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI-ACLQYRGRLVVSGSS 403
Query: 229 DECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
D +RL+D +G L +GH+ + C+ + +I G+ DGKI W L
Sbjct: 404 DNTIRLWDIHSGVCLRVLEGHEE----LVRCIRFDEKRIVSGAYDGKIKVWDL 452
Score = 151 (58.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/163 (26%), Positives = 77/163 (47%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+ A+ V F D Y ++ D+ IK+W+ ++T GH + A + S
Sbjct: 345 RAAVNVVDF--DDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQYRGRLVVS 400
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH 132
G+SD ++ LW++ +G +R H V C++F+E ++SG+ D + +WD
Sbjct: 401 GSSDNTIRLWDIHSGVCLRVLEGHEELVRCIRFDEKR--IVSGAYDGKIKVWD------- 451
Query: 133 PIQCCLDSK--DSQI-FCG--SSDGKIYKWQLVDSSQISTLIH 170
+Q LD + S+I C G++++ Q D QI + H
Sbjct: 452 -LQAALDPRALSSEICLCSLVQHTGRVFRLQF-DDFQIVSSSH 492
Score = 135 (52.6 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 57/240 (23%), Positives = 98/240 (40%)
Query: 22 NVDGSYCLTCGSDK--------KIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
N G YCL DK IK+W+ + GH V D+ I SG
Sbjct: 221 NSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISG 278
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR---- 129
+SD +V +W+V TG+ ++ H V ++F + ++++ S+D ++ +WD+ S
Sbjct: 279 SSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDIT 336
Query: 130 ------SHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
H +D D I S D I W + + TL H G A +
Sbjct: 337 IRRVLVGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ---- 392
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ R + + N ++LW G E +V C D + I++ + D ++++D
Sbjct: 393 YRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELV-RCIRFDEKRIVSGAYDGKIKVWD 451
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 71/293 (24%), Positives = 114/293 (38%)
Query: 34 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 93
D IK+W+ + GH V D+ I SG+SD +V +W+V TG+ ++
Sbjct: 241 DNTIKIWDRKDYSCSRILSGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTL 298
Query: 94 REHASKVTCVKFNEDSSVVISGSQD----NTVMMWDVKSR----SHHPIQCCLDSKDSQI 145
H V ++F V S + + V D+ R H +D D I
Sbjct: 299 IHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRYI 358
Query: 146 FCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEE 204
S D I W + + TL H G A + + R + + N ++LW
Sbjct: 359 VSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQ----YRGRLVVSGSSDNTIRLWDIHS 414
Query: 205 DY------GQEPIVDACFTRDCQCILTCSTDECLRLFD-------KA-TGEL-LEEYKGH 249
G E +V C D + I++ + D ++++D +A + E+ L H
Sbjct: 415 GVCLRVLEGHEELV-RCIRFDEKRIVSGAYDGKIKVWDLQAALDPRALSSEICLCSLVQH 473
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSL 302
FR++ D D QI S D I W +D+ S L S +A + L
Sbjct: 474 TGRVFRLQ--FD--DFQIVSSSHDDTILIWDFLDAPP-SGLPSSTNRATLPEL 521
>MGI|MGI:2442144 [details] [associations]
symbol:Taf5 "TAF5 RNA polymerase II, TATA box binding
protein (TBP)-associated factor" species:10090 "Mus musculus"
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005669
"transcription factor TFIID complex" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=ISO] [GO:0016573 "histone acetylation"
evidence=ISO] [GO:0033276 "transcription factor TFTC complex"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:2442144
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0003677 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0005669 HOVERGEN:HBG050226
KO:K03130 CTD:6877 OrthoDB:EOG469QW7 EMBL:AK031985 EMBL:AK088953
IPI:IPI00223695 RefSeq:NP_796316.2 UniGene:Mm.301522
ProteinModelPortal:Q8C092 SMR:Q8C092 STRING:Q8C092
PhosphoSite:Q8C092 PaxDb:Q8C092 PRIDE:Q8C092 DNASU:226182
GeneID:226182 KEGG:mmu:226182 UCSC:uc008hun.1 HOGENOM:HOG000212424
InParanoid:Q8C092 NextBio:378056 Genevestigator:Q8C092
GermOnline:ENSMUSG00000025049 Uniprot:Q8C092
Length = 801
Score = 189 (71.6 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 55/202 (27%), Positives = 91/202 (45%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G + F+ D +Y L+ D ++LW+ L Y GH + V D + SG
Sbjct: 545 GPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG 604
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D+ LW QP+R + H + V C +++ +S+ V +GS D TV +WDV + +
Sbjct: 605 GHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVR 664
Query: 131 ----HH-PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS-H 183
H PI S + + G++DG++ W + + L K +++CS
Sbjct: 665 IFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGEL-----KGHTDTVCSLR 719
Query: 184 PTRKHIMSACG---NNVKLWTA 202
+R + A G N V+LW A
Sbjct: 720 FSRDGEILASGSMDNTVRLWDA 741
Score = 182 (69.1 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 33/114 (28%), Positives = 64/114 (56%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ R++ + +Y T +D+ ++LW+ ++ + GH ++ T + + +A+GA+
Sbjct: 631 VNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGAT 690
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD-VKS 128
D V+LW++ G V + H V ++F+ D ++ SGS DNTV +WD VK+
Sbjct: 691 DGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKA 744
Score = 175 (66.7 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+TC+ + +F+ G Y ++ G D+ +LW L+ + GH +VN
Sbjct: 576 FTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTR 635
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+S+ +A+G++D++V LW+V G VR + H + + F+ + + +G+ D V+
Sbjct: 636 YHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVL 695
Query: 123 MWDV-------KSRSHHPIQCCLD-SKDSQIFC-GSSDGKIYKWQLV 160
+WD+ + + H C L S+D +I GS D + W V
Sbjct: 696 LWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAV 742
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 71/280 (25%), Positives = 120/280 (42%)
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
DSS IA G +D +V +W VT + +R ++ AS ++ + +++S V+ D +
Sbjct: 482 DSSLIAGGFADSTVRVWSVTP-KKLRSVKQ-ASDLSLI--DKESDDVLERIMDEKTAS-E 536
Query: 126 VKSRSHH--PIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGK--AVVNSL 180
+K H P+ S D SS DG + W L + L+ G V ++
Sbjct: 537 LKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSL---QTFTCLVGYKGHNYPVWDTQ 593
Query: 181 CSHPTRKHIMSACGNNV-KLWTAEEDYGQEPI-VDACFTRDCQC---------ILTCSTD 229
S P + +S + V +LW A + Y +P+ + A D C + T S D
Sbjct: 594 FS-PYGYYFVSGGHDRVARLW-ATDHY--QPLRIFAGHLADVNCTRYHPNSNYVATGSAD 649
Query: 230 ECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSSQIS 288
+RL+D G + + GHK I S + + G++DG++ W + +
Sbjct: 650 RTVRLWDVLNGNCVRIFTGHKGP---IHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVG 706
Query: 289 TLIHSVGKAVVNSLCS-HPTRKHIMSACG---NNVKLWTA 324
L K +++CS +R + A G N V+LW A
Sbjct: 707 EL-----KGHTDTVCSLRFSRDGEILASGSMDNTVRLWDA 741
>UNIPROTKB|F1N9W1 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0034644 "cellular response to
UV" evidence=IEA] [GO:0045741 "positive regulation of epidermal
growth factor-activated receptor activity" evidence=IEA]
[GO:0050821 "protein stabilization" evidence=IEA] [GO:0070374
"positive regulation of ERK1 and ERK2 cascade" evidence=IEA]
[GO:2000060 "positive regulation of protein ubiquitination involved
in ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:AADN02016174 IPI:IPI00582326
Ensembl:ENSGALT00000016428 Uniprot:F1N9W1
Length = 587
Score = 187 (70.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 59/282 (20%), Positives = 124/282 (43%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 271 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 328
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCC 137
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H C
Sbjct: 329 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 386
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMS-ACGN 195
+ ++ G+ D + W + T +H++ + N + S H++S +
Sbjct: 387 VQYDGRRVVSGAYDFMVKVWD----PETETCLHTL-QGHTNRVYSLQFDGIHVVSGSLDT 441
Query: 196 NVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
++++W E G + + +D +++ + D ++++D TG+ L+ +G
Sbjct: 442 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGP 500
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
+ C +K+ + S DG + W L I L+
Sbjct: 501 NKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 541
Score = 171 (65.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 61/287 (21%), Positives = 122/287 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K GH V C ++I SG+ D ++ +W TG+ +R H V + ++
Sbjct: 254 KVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 312
Query: 109 SSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
++ISGS D T+ +W+ ++ H C+ + ++ GS D + W +
Sbjct: 313 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 370
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED---YGQEPIVDACFTR 218
+ L+ V A V + + R+ + A VK+W E + + + + ++
Sbjct: 371 GQCLHVLMGHV--AAVRCV-QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 427
Query: 219 --DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
D +++ S D +R++D TG + GH+S + ++ KD+ + G++D +
Sbjct: 428 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNADSTV 483
Query: 277 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W + + TL K C + ++++ + VKLW
Sbjct: 484 KIWDIKTGQCLQTL-QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 529
Score = 161 (61.7 bits), Expect = 8.6e-09, P = 8.6e-09
Identities = 68/291 (23%), Positives = 125/291 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ G + + + D + ++ +D+ +K+WN + T GH V
Sbjct: 293 CLRTLVGHTGGVWSSQMR-D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH 348
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ SG+ D ++ +W++ TGQ + H + V CV++ D V+SG+ D V +W
Sbjct: 349 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 406
Query: 125 DVKSRSH-HPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
D ++ + H +Q L + GS D I W + + I TL G
Sbjct: 407 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGH--- 460
Query: 178 NSLCSHPTRKHIMSACGN---NVKLW---TAE-----EDYGQEPIVDACFTRDCQCILTC 226
SL S K + GN VK+W T + + + C + ++T
Sbjct: 461 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 520
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFR-IECCLDSKDSQIFC--GSSDG 274
S D ++L+D TGE + +SG + + + ++++ C GS +G
Sbjct: 521 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 571
>RGD|2321145 [details] [associations]
symbol:Fbxw7 "F-box and WD repeat domain containing 7, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
evidence=ISO] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO]
[GO:0030324 "lung development" evidence=ISO] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0034644 "cellular response to
UV" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=ISO] [GO:2000060
"positive regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 RGD:2321145
GO:GO:0005783 GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974
GO:GO:0016567 GO:GO:0019005 GO:GO:0034644 GO:GO:0032876
GO:GO:2000060 GO:GO:0031146 GO:GO:0007062
GeneTree:ENSGT00690000101849 OrthoDB:EOG4MKNFW IPI:IPI00212282
ProteinModelPortal:D3ZQU4 Ensembl:ENSRNOT00000015279
UCSC:RGD:2321145 ArrayExpress:D3ZQU4 Uniprot:D3ZQU4
Length = 588
Score = 187 (70.9 bits), Expect = 9.8e-12, P = 9.8e-12
Identities = 59/282 (20%), Positives = 124/282 (43%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 370
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCC 137
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H C
Sbjct: 371 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 428
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMS-ACGN 195
+ ++ G+ D + W + T +H++ + N + S H++S +
Sbjct: 429 VQYDGRRVVSGAYDFMVKVWD----PETETCLHTL-QGHTNRVYSLQFDGIHVVSGSLDT 483
Query: 196 NVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
++++W E G + + +D +++ + D ++++D TG+ L+ +G
Sbjct: 484 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGP 542
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
+ C +K+ + S DG + W L I L+
Sbjct: 543 SKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 583
Score = 171 (65.3 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 61/287 (21%), Positives = 122/287 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K GH V C ++I SG+ D ++ +W TG+ +R H V + ++
Sbjct: 296 KVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 354
Query: 109 SSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
++ISGS D T+ +W+ ++ H C+ + ++ GS D + W +
Sbjct: 355 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 412
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED---YGQEPIVDACFTR 218
+ L+ V A V + + R+ + A VK+W E + + + + ++
Sbjct: 413 GQCLHVLMGHV--AAVRCV-QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 219 --DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
D +++ S D +R++D TG + GH+S + ++ KD+ + G++D +
Sbjct: 470 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNADSTV 525
Query: 277 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W + + TL K C + ++++ + VKLW
Sbjct: 526 KIWDIKTGQCLQTL-QGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 64/266 (24%), Positives = 113/266 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ G + + + D + ++ +D+ +K+WN + T GH V
Sbjct: 335 CLRTLVGHTGGVWSSQMR-D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH 390
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ SG+ D ++ +W++ TGQ + H + V CV++ D V+SG+ D V +W
Sbjct: 391 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 448
Query: 125 DVKSRSH-HPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
D ++ + H +Q L + GS D I W + + I TL G
Sbjct: 449 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGH--- 502
Query: 178 NSLCSHPTRKHIMSACGN---NVKLW---TAE-----EDYGQEPIVDACFTRDCQCILTC 226
SL S K + GN VK+W T + + + C + ++T
Sbjct: 503 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITS 562
Query: 227 STDECLRLFDKATGELLEEYKGHKSG 252
S D ++L+D TGE + +SG
Sbjct: 563 SDDGTVKLWDLKTGEFIRNLVTLESG 588
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 183 (69.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 40/120 (33%), Positives = 63/120 (52%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F DG +T DK +K+W +R L + H + V A + D I S +
Sbjct: 68 VRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 127
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK+V LW+ ++ + V + EH VT V F+ + + + DNTV +WDV R+H +Q
Sbjct: 128 DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV--RTHRLLQ 185
Score = 161 (61.7 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 65/266 (24%), Positives = 104/266 (39%)
Query: 34 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 93
D + +W+ + GH V + +ASG+ DK+V +W +
Sbjct: 2 DSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVF 61
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK------SRSHHP--IQCCLDSKDSQI 145
R H + V V F D ++ S D TV +W S S H ++C S D ++
Sbjct: 62 RAHTATVRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL 121
Query: 146 FCGSSDGKIYKWQLVDSSQISTLIHSVGK--AVVNSLCSHPTRKHIMSA-CGNNVKLWTA 202
+SD K K L D S +HS + V + HP+ I +A N VK+W
Sbjct: 122 IVSASDDKTVK--LWDKSS-RECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV 178
Query: 203 E-----EDYG--QEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 255
+ Y + F ++T S+D L++ D G LL GH+
Sbjct: 179 RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATT 238
Query: 256 IECCLDSKDSQIFC-GSSDGKIYKWQ 280
+ S+ + F G SD ++ W+
Sbjct: 239 VAF---SRTGEYFASGGSDEQVMVWK 261
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/164 (22%), Positives = 76/164 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R +F+ DG ++ DK +KLW+ + +Y H V + IA+
Sbjct: 110 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 169
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
D +V +W+V T + ++ ++ H++ V + F+ + +I+ S D+T+ + D+
Sbjct: 170 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 229
Query: 129 RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQ----LVDSSQIS 166
H P S+ + F G SD ++ W+ +VD +++
Sbjct: 230 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVT 273
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 5 CVQTIDCKQGA-IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
CV + C+ G + V F+ G+ G D +K+W+ + LL+ Y H+ VN +
Sbjct: 141 CVHSY-CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF 199
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ + + +SD ++ + ++ G+ + H T V F+ SG D VM+
Sbjct: 200 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 259
Query: 124 W 124
W
Sbjct: 260 W 260
>SGD|S000004722 [details] [associations]
symbol:ASC1 "G-protein beta subunit and guanine nucleotide
dissociation inhibitor" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004871 "signal
transducer activity" evidence=IMP;IPI] [GO:0001403 "invasive growth
in response to glucose limitation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0017148
"negative regulation of translation" evidence=IMP] [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=IMP;IPI]
[GO:0001965 "G-protein alpha-subunit binding" evidence=IPI]
[GO:0005092 "GDP-dissociation inhibitor activity" evidence=IDA]
[GO:0010255 "glucose mediated signaling pathway" evidence=IMP;IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000004722 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007186 EMBL:BK006946 GO:GO:0004871
GO:GO:0001403 EMBL:Z49702 GO:GO:0022627 GO:GO:0010255
HOGENOM:HOG000091643 KO:K14753 OMA:IRVWQVM
GeneTree:ENSGT00700000104461 GO:GO:0005092 OrthoDB:EOG437VPP
PIR:S54578 RefSeq:NP_013834.1 PDB:1TRJ PDB:3FRX PDB:3IZB PDB:3O2Z
PDB:3O30 PDB:3RFG PDB:3RFH PDB:3U5C PDB:3U5G PDBsum:1TRJ
PDBsum:3FRX PDBsum:3IZB PDBsum:3O2Z PDBsum:3O30 PDBsum:3RFG
PDBsum:3RFH PDBsum:3U5C PDBsum:3U5G ProteinModelPortal:P38011
SMR:P38011 DIP:DIP-6465N IntAct:P38011 MINT:MINT-652105
STRING:P38011 UCD-2DPAGE:P38011 PaxDb:P38011 PeptideAtlas:P38011
EnsemblFungi:YMR116C GeneID:855143 KEGG:sce:YMR116C
EvolutionaryTrace:P38011 NextBio:978537 Genevestigator:P38011
GermOnline:YMR116C Uniprot:P38011
Length = 319
Score = 166 (63.5 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 29/82 (35%), Positives = 52/82 (63%)
Query: 48 LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE 107
++++ GH+H V D T D + S + DK++ LW+V TG+ +R+ H S V V ++
Sbjct: 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 108 DSSVVISGSQDNTVMMWDVKSR 129
+S++ISGS+D T+ +W +K +
Sbjct: 118 KASMIISGSRDKTIKVWTIKGQ 139
Score = 152 (58.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 51/198 (25%), Positives = 85/198 (42%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG+Y L+ DK ++LW+ + + GH +V +S I SG+ DK++ +W
Sbjct: 76 DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWT 135
Query: 84 VTTGQPVRRWREH---ASKVTCV---KFNEDSSVVISGSQDNTVMMWDVKSRS------- 130
+ GQ + H S+V V K ++DS +IS D V W++
Sbjct: 136 IK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIG 194
Query: 131 HHP-IQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKH 188
H+ I S D + + DG+I W L + TL + V SL P R
Sbjct: 195 HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS---AQDEVFSLAFSPNRYW 251
Query: 189 IMSACGNNVKLWTAEEDY 206
+ +A +K+++ + Y
Sbjct: 252 LAAATATGIKVFSLDPQY 269
Score = 133 (51.9 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 53/171 (30%), Positives = 79/171 (46%)
Query: 165 ISTLIHSVGKAVVNSLCSHPTRKHIMS--ACGNNVKLWTAEEDY-GQEPIVDAC-FTRDC 220
+++L S G+ N L S K ++S G++ K + G IV C T D
Sbjct: 20 VTSLATSAGQP--NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG 77
Query: 221 QCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQ 280
L+ S D+ LRL+D ATGE + + GHKS ++ +D K S I GS D I W
Sbjct: 78 AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVD--IDKKASMIISGSRDKTIKVWT 135
Query: 281 LVDSSQISTLIHS--VGKA-VVNSLCSHPTRKHIMSACGNN--VKLWTAEE 326
+ + L H+ V + VV + + I+SA GN+ VK W +
Sbjct: 136 IKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISA-GNDKMVKAWNLNQ 185
Score = 53 (23.7 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 36/161 (22%), Positives = 68/161 (42%)
Query: 139 DSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSACGNN- 196
D I +D + W L + QI +G + +N+L + P I SA +
Sbjct: 163 DDDSVTIISAGNDKMVKAWNL-NQFQIEA--DFIGHNSNINTLTASPDGTLIASAGKDGE 219
Query: 197 VKLWT--AEED-Y---GQEPIVDACFTRDCQCILTCSTDECLRLFDK----ATGELLEEY 246
+ LW A++ Y Q+ + F+ + + L +T +++F +L E+
Sbjct: 220 IMLWNLAAKKAMYTLSAQDEVFSLAFSPN-RYWLAAATATGIKVFSLDPQYLVDDLRPEF 278
Query: 247 KGH-KSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVDSS 285
G+ K+ + S D Q +F G +D I WQ++ ++
Sbjct: 279 AGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTAN 319
>UNIPROTKB|F1MNN4 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000060 "positive regulation of protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849
OMA:EECLHTL EMBL:DAAA02044177 IPI:IPI00716528 UniGene:Bt.24006
ProteinModelPortal:F1MNN4 Ensembl:ENSBTAT00000010457 Uniprot:F1MNN4
Length = 627
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/282 (20%), Positives = 124/282 (43%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 311 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 368
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCC 137
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H C
Sbjct: 369 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 426
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMS-ACGN 195
+ ++ G+ D + W + T +H++ + N + S H++S +
Sbjct: 427 VQYDGRRVVSGAYDFMVKVWD----PETETCLHTL-QGHTNRVYSLQFDGIHVVSGSLDT 481
Query: 196 NVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
++++W E G + + +D +++ + D ++++D TG+ L+ +G
Sbjct: 482 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGP 540
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
+ C +K+ + S DG + W L I L+
Sbjct: 541 NKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 581
Score = 171 (65.3 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 61/287 (21%), Positives = 122/287 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K GH V C ++I SG+ D ++ +W TG+ +R H V + ++
Sbjct: 294 KVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 352
Query: 109 SSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
++ISGS D T+ +W+ ++ H C+ + ++ GS D + W +
Sbjct: 353 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 410
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED---YGQEPIVDACFTR 218
+ L+ V A V + + R+ + A VK+W E + + + + ++
Sbjct: 411 GQCLHVLMGHV--AAVRCV-QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 467
Query: 219 --DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
D +++ S D +R++D TG + GH+S + ++ KD+ + G++D +
Sbjct: 468 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNADSTV 523
Query: 277 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W + + TL K C + ++++ + VKLW
Sbjct: 524 KIWDIKTGQCLQTL-QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 569
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 68/291 (23%), Positives = 125/291 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ G + + + D + ++ +D+ +K+WN + T GH V
Sbjct: 333 CLRTLVGHTGGVWSSQMR-D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH 388
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ SG+ D ++ +W++ TGQ + H + V CV++ D V+SG+ D V +W
Sbjct: 389 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 446
Query: 125 DVKSRSH-HPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
D ++ + H +Q L + GS D I W + + I TL G
Sbjct: 447 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGH--- 500
Query: 178 NSLCSHPTRKHIMSACGN---NVKLW---TAE-----EDYGQEPIVDACFTRDCQCILTC 226
SL S K + GN VK+W T + + + C + ++T
Sbjct: 501 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 560
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFR-IECCLDSKDSQIFC--GSSDG 274
S D ++L+D TGE + +SG + + + ++++ C GS +G
Sbjct: 561 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 611
>MGI|MGI:1354695 [details] [associations]
symbol:Fbxw7 "F-box and WD-40 domain protein 7"
species:10090 "Mus musculus" [GO:0001570 "vasculogenesis"
evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO;ISA] [GO:0019005
"SCF ubiquitin ligase complex" evidence=ISO] [GO:0030324 "lung
development" evidence=IMP] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0050821 "protein stabilization" evidence=ISO]
[GO:0070374 "positive regulation of ERK1 and ERK2 cascade"
evidence=ISO] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=ISO] Reactome:REACT_93132 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 MGI:MGI:1354695 GO:GO:0005783
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030324
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0016567 GO:GO:0001570
GO:GO:0019005 GO:GO:0031146 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 HOVERGEN:HBG051596 OMA:EECLHTL EMBL:AF391202
EMBL:AF391193 EMBL:AF391194 EMBL:AF391195 EMBL:AF391196
EMBL:AF391197 EMBL:AF391198 EMBL:AF391199 EMBL:AF391200
EMBL:AF391201 EMBL:AF391192 EMBL:AF427101 EMBL:BC131648
EMBL:AK032174 IPI:IPI00162935 RefSeq:NP_536353.2 UniGene:Mm.196475
ProteinModelPortal:Q8VBV4 SMR:Q8VBV4 STRING:Q8VBV4 PRIDE:Q8VBV4
Ensembl:ENSMUST00000029727 GeneID:50754 KEGG:mmu:50754
UCSC:uc008pql.2 HOGENOM:HOG000236264 NextBio:307631 Bgee:Q8VBV4
Genevestigator:Q8VBV4 GermOnline:ENSMUSG00000028086 Uniprot:Q8VBV4
Length = 629
Score = 187 (70.9 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 59/282 (20%), Positives = 124/282 (43%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 313 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 370
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCC 137
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H C
Sbjct: 371 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 428
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMS-ACGN 195
+ ++ G+ D + W + T +H++ + N + S H++S +
Sbjct: 429 VQYDGRRVVSGAYDFMVKVWD----PETETCLHTL-QGHTNRVYSLQFDGIHVVSGSLDT 483
Query: 196 NVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
++++W E G + + +D +++ + D ++++D TG+ L+ +G
Sbjct: 484 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGP 542
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
+ C +K+ + S DG + W L I L+
Sbjct: 543 SKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 583
Score = 171 (65.3 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 61/287 (21%), Positives = 122/287 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K GH V C ++I SG+ D ++ +W TG+ +R H V + ++
Sbjct: 296 KVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 354
Query: 109 SSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
++ISGS D T+ +W+ ++ H C+ + ++ GS D + W +
Sbjct: 355 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 412
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED---YGQEPIVDACFTR 218
+ L+ V A V + + R+ + A VK+W E + + + + ++
Sbjct: 413 GQCLHVLMGHV--AAVRCV-QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 469
Query: 219 --DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
D +++ S D +R++D TG + GH+S + ++ KD+ + G++D +
Sbjct: 470 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNADSTV 525
Query: 277 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W + + TL K C + ++++ + VKLW
Sbjct: 526 KIWDIKTGQCLQTL-QGPSKHQSAVTCLQFNKNFVITSSDDGTVKLW 571
Score = 161 (61.7 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 68/291 (23%), Positives = 125/291 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ G + + + D + ++ +D+ +K+WN + T GH V
Sbjct: 335 CLRTLVGHTGGVWSSQMR-D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH 390
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ SG+ D ++ +W++ TGQ + H + V CV++ D V+SG+ D V +W
Sbjct: 391 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 448
Query: 125 DVKSRSH-HPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
D ++ + H +Q L + GS D I W + + I TL G
Sbjct: 449 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGH--- 502
Query: 178 NSLCSHPTRKHIMSACGN---NVKLW---TAE-----EDYGQEPIVDACFTRDCQCILTC 226
SL S K + GN VK+W T + + + C + ++T
Sbjct: 503 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKNFVITS 562
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFR-IECCLDSKDSQIFC--GSSDG 274
S D ++L+D TGE + +SG + + + ++++ C GS +G
Sbjct: 563 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 613
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 181 (68.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 45/158 (28%), Positives = 75/158 (47%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIAS 72
G I +F+ DGS+ + G D++I LWN + GH + + DSS + S
Sbjct: 37 GEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSHLVS 96
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS-SVVISGSQDNTVMMWDVKSRSH 131
+DK+V +W++ TG +R ++ H V V N ++ S S D TVM+ D++S+
Sbjct: 97 AGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEA 156
Query: 132 HPIQCCL---------DSKDSQIFCGSSDGKIYKWQLV 160
C D+ D+ + CG D +I W ++
Sbjct: 157 AKKFICKYQQTAVTFNDAADN-VICGGIDNQIKVWDML 193
Score = 144 (55.7 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 31/115 (26%), Positives = 61/115 (53%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQ-IA 71
+GAI V+FN D S+ ++ G+DK +++W+ ++ + H VN Q I
Sbjct: 79 KGAIMEVKFNADSSHLVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMIC 138
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
S + D +V++ ++ + + +++ + T V FN+ + VI G DN + +WD+
Sbjct: 139 SASDDGTVMVHDMRSKEAAKKFICKYQQ-TAVTFNDAADNVICGGIDNQIKVWDM 192
Score = 124 (48.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 40/159 (25%), Positives = 66/159 (41%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTG-QPVRRWREHASKVTCVKFNEDSSV 111
GH E+ + + D S +AS D+ + LW V + + H + VKFN DSS
Sbjct: 34 GHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKFNADSSH 93
Query: 112 VISGSQDNTVMMWDVKS-------RSHHPIQCCLD--SKDSQIFCGSSD-GKIYKWQLVD 161
++S D TV +WD+++ +SH I +D + Q+ C +SD G + +
Sbjct: 94 LVSAGTDKTVRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRS 153
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 200
I + V + I N +K+W
Sbjct: 154 KEAAKKFICKYQQTAVTF--NDAADNVICGGIDNQIKVW 190
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 32/122 (26%), Positives = 61/122 (50%)
Query: 18 AVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASD 76
AV FN D + + CG D +IK+W+ RN + GH + + + + + + S + D
Sbjct: 168 AVTFN-DAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLSNSMD 226
Query: 77 KSVILWEVTTGQP----VRRWR--EHASKVTCVK--FNEDSSVVISGSQDNTVMMWDVKS 128
S++ W++ P V R++ H + +K ++ + + +GS D V +W+ KS
Sbjct: 227 CSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGWSPRDNYITAGSADRFVYVWNAKS 286
Query: 129 RS 130
R+
Sbjct: 287 RA 288
>RGD|1307063 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 IPI:IPI01016587
Ensembl:ENSRNOT00000064081 UCSC:RGD:1307063 ArrayExpress:F1LTB9
Uniprot:F1LTB9
Length = 444
Score = 184 (69.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y + L+T+ GH+ V D +Q S
Sbjct: 156 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 215
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 216 AYDRYLKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 273
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 274 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 329
Score = 133 (51.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 42/212 (19%), Positives = 89/212 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDAT 62
C++T A+R + FN G+ L+ D+ +KLW+ + + + V
Sbjct: 189 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 248
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++
Sbjct: 249 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 308
Query: 123 MWD---------VKSRSHHPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+W+ + S H + S + + + C S D +I + + +++
Sbjct: 309 VWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFK 368
Query: 173 GKAVVNSLCS---HPTRKHIMSACGNN-VKLW 200
G V C P +++S GN + +W
Sbjct: 369 GHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 400
>UNIPROTKB|F1LMQ0 [details] [associations]
symbol:Cdc40 "Protein Cdc40" species:10116 "Rattus
norvegicus" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307063 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0071013 IPI:IPI00870547
Ensembl:ENSRNOT00000000709 ArrayExpress:F1LMQ0 Uniprot:F1LMQ0
Length = 447
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y + L+T+ GH+ V D +Q S
Sbjct: 159 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 218
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 219 AYDRYLKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 276
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 277 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 332
Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 42/212 (19%), Positives = 89/212 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDAT 62
C++T A+R + FN G+ L+ D+ +KLW+ + + + V
Sbjct: 192 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 251
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++
Sbjct: 252 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 311
Query: 123 MWD---------VKSRSHHPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+W+ + S H + S + + + C S D +I + + +++
Sbjct: 312 VWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFK 371
Query: 173 GKAVVNSLCS---HPTRKHIMSACGNN-VKLW 200
G V C P +++S GN + +W
Sbjct: 372 GHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 403
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 142 (55.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 40/166 (24%), Positives = 76/166 (45%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV------- 58
V+T + A++++ G +C D +K+W+ ++ + H+ E+
Sbjct: 356 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 415
Query: 59 -NDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 116
AT+ +SS +AS + D +V LW+V G + +H V V F+ D + SGS
Sbjct: 416 TGPATSNPNSSIMLASASFDSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGS 475
Query: 117 QDNTVMMWDVKSRSH-HP-------IQCCLDSKDSQIFCGSSDGKI 154
D V +W+ +S S H + C +++ ++ +SDG +
Sbjct: 476 FDKCVHIWNTQSGSLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 521
Score = 127 (49.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 30/129 (23%), Positives = 67/129 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ +G I A+++N G+Y L+ G DK +W+ + + + H+ D ++
Sbjct: 275 TLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NN 333
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ AS ++D + + + +PV+ ++ H ++V +K++ ++ S S D T+ +W +K
Sbjct: 334 TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 393
Query: 128 SRSH-HPIQ 135
+ H +Q
Sbjct: 394 QDTCVHDLQ 402
Score = 105 (42.0 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 36/150 (24%), Positives = 69/150 (46%)
Query: 137 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS-VGKAVVNSLCSHPTRKHIMSACG- 194
C D +I+ D ++ Q S +I T+ S G A S+P ++++
Sbjct: 381 CSDDMTLKIWSMKQDTCVHDLQ-AHSKEIYTIKWSPTGPAT-----SNPNSSIMLASASF 434
Query: 195 -NNVKLWTAEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 246
+ V+LW E QEP+ F+ D + + + S D+C+ +++ +G L+ Y
Sbjct: 435 DSTVRLWDVERGVCLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGSLVHSY 494
Query: 247 KGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
+G G F E C +++ ++ +SDG +
Sbjct: 495 RG-TGGIF--EVCWNARGDKVGASASDGSV 521
Score = 80 (33.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ ++ +N DG+ T D ++W NL T G H + + I S
Sbjct: 242 VTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNYILSAGV 300
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 118
DK+ I+W+ TG+ +++ H++ V + ++++ S S D
Sbjct: 301 DKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTD 342
Score = 64 (27.6 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
R H S+V +N S ++ SGS D+T +W++ S+
Sbjct: 180 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 217
Score = 59 (25.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 27/86 (31%), Positives = 41/86 (47%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILW---EVTTG---QPVRRW--RE--H---ASK 99
GH EV S +ASG+ D + +W E + G Q V R RE H ++K
Sbjct: 181 GHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNK 240
Query: 100 -VTCVKFNEDSSVVISGSQDNTVMMW 124
VT + +N D +++ +GS D +W
Sbjct: 241 DVTSLDWNSDGTLLATGSYDGFARIW 266
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/120 (33%), Positives = 63/120 (52%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R+V F DG +T DK +K+W +R L + H + V A + D I S +
Sbjct: 106 VRSVHFCSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASD 165
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
DK+V LW+ ++ + V + EH VT V F+ + + + DNTV +WDV R+H +Q
Sbjct: 166 DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV--RTHRLLQ 223
Score = 169 (64.5 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 71/300 (23%), Positives = 128/300 (42%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH V + ++ Q+ASG+ D +++W + R+ H VTCV F+
Sbjct: 11 LERHFKGHRDAVTCVDFSINTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 107 EDSSVVISGSQDNTVMMW--DVKS-----RSHHP-IQCCLDSKDSQIFCGSSDGKIYKWQ 158
++ SGS+D TV +W +VK R+H ++ D Q F +SD K K
Sbjct: 71 PSGHLLASGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK-- 128
Query: 159 LVDSSQISTLIHSVGKAVVNSLCSH--PTRKHIMSACGNN-VKLW--TAEE---DYGQEP 210
V ++ + S+ + + C+ P + I+SA + VKLW ++ E Y +
Sbjct: 129 -VWATHRQKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHG 187
Query: 211 --IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ F CI D ++++D T LL+ Y+ H + + + +
Sbjct: 188 GFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLS--FHPSGNYLI 245
Query: 269 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 327
SSD + L++ + TL G A ++ T ++ S + V +W + D
Sbjct: 246 TASSDSTLKILDLMEGRLLYTLHGHQGPAT--TVAFSRTGEYFASGGSDEQVMVWKSNFD 303
Score = 138 (53.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 37/164 (22%), Positives = 76/164 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R +F+ DG ++ DK +KLW+ + +Y H V + IA+
Sbjct: 148 VRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM 207
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------- 128
D +V +W+V T + ++ ++ H++ V + F+ + +I+ S D+T+ + D+
Sbjct: 208 DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLMEGRLLYTL 267
Query: 129 RSHH-PIQCCLDSKDSQIFC-GSSDGKIYKWQ----LVDSSQIS 166
H P S+ + F G SD ++ W+ +VD +++
Sbjct: 268 HGHQGPATTVAFSRTGEYFASGGSDEQVMVWKSNFDIVDHGEVT 311
Score = 125 (49.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 30/121 (24%), Positives = 55/121 (45%)
Query: 5 CVQTIDCKQGA-IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
CV + C+ G + V F+ G+ G D +K+W+ + LL+ Y H+ VN +
Sbjct: 179 CVHSY-CEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHSAAVNGLSF 237
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
+ + + +SD ++ + ++ G+ + H T V F+ SG D VM+
Sbjct: 238 HPSGNYLITASSDSTLKILDLMEGRLLYTLHGHQGPATTVAFSRTGEYFASGGSDEQVMV 297
Query: 124 W 124
W
Sbjct: 298 W 298
>UNIPROTKB|Q969H0 [details] [associations]
symbol:FBXW7 "F-box/WD repeat-containing protein 7"
species:9606 "Homo sapiens" [GO:0019048 "virus-host interaction"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0030324 "lung development" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0034644 "cellular response to UV" evidence=IDA] [GO:0007219
"Notch signaling pathway" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0045741 "positive
regulation of epidermal growth factor-activated receptor activity"
evidence=IDA] [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0050821 "protein stabilization"
evidence=IDA] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=IMP] [GO:2000346 "negative regulation of
hepatocyte proliferation" evidence=ISS] [GO:0055088 "lipid
homeostasis" evidence=ISS] [GO:0032880 "regulation of protein
localization" evidence=ISS] [GO:0010883 "regulation of lipid
storage" evidence=ISS] [GO:0010868 "negative regulation of
triglyceride biosynthetic process" evidence=ISS] [GO:0001944
"vasculature development" evidence=TAS] [GO:0045746 "negative
regulation of Notch signaling pathway" evidence=ISS] [GO:2000639
"negative regulation of SREBP signaling pathway" evidence=ISS]
Reactome:REACT_17015 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
GO:GO:0005783 GO:GO:0005794 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0019048 GO:GO:0043234 GO:GO:0050821
GO:GO:0005654 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219
GO:GO:0045741 GO:GO:0003700 GO:GO:0032880 SUPFAM:SSF81383
GO:GO:0006974 GO:GO:0016567 GO:GO:0055088 GO:GO:0019005
GO:GO:0034644 GO:GO:0001944 GO:GO:0032876 GO:GO:0010883
GO:GO:2000060 GO:GO:0045746 GO:GO:0031146 GO:GO:0007062 KO:K10260
EMBL:AY033553 EMBL:AF383178 EMBL:AY008274 EMBL:AF411971
EMBL:AF411972 EMBL:AY049984 EMBL:AK001933 EMBL:CR749305
EMBL:BC037320 EMBL:BC117244 EMBL:BC117246 EMBL:BC143944
IPI:IPI00056349 IPI:IPI00059165 IPI:IPI00075075 IPI:IPI00402151
RefSeq:NP_001013433.1 RefSeq:NP_060785.2 RefSeq:NP_361014.1
UniGene:Hs.561245 UniGene:Hs.717081 PDB:2OVP PDB:2OVQ PDB:2OVR
PDBsum:2OVP PDBsum:2OVQ PDBsum:2OVR ProteinModelPortal:Q969H0
SMR:Q969H0 DIP:DIP-27613N IntAct:Q969H0 MINT:MINT-276696
STRING:Q969H0 PhosphoSite:Q969H0 DMDM:44887885 PaxDb:Q969H0
PRIDE:Q969H0 DNASU:55294 Ensembl:ENST00000263981
Ensembl:ENST00000281708 Ensembl:ENST00000296555 GeneID:55294
KEGG:hsa:55294 UCSC:uc003imq.3 UCSC:uc003imr.3 UCSC:uc003ims.3
CTD:55294 GeneCards:GC04M153242 HGNC:HGNC:16712 HPA:CAB013793
HPA:CAB029987 MIM:606278 neXtProt:NX_Q969H0 PharmGKB:PA28054
HOVERGEN:HBG051596 InParanoid:Q969H0 OMA:EECLHTL OrthoDB:EOG4MKNFW
PhylomeDB:Q969H0 EvolutionaryTrace:Q969H0 GenomeRNAi:55294
NextBio:59488 ArrayExpress:Q969H0 Bgee:Q969H0 CleanEx:HS_FBXW7
Genevestigator:Q969H0 GermOnline:ENSG00000109670 GO:GO:2000346
GO:GO:2000639 GO:GO:0010868 Uniprot:Q969H0
Length = 707
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 59/282 (20%), Positives = 124/282 (43%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 391 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 448
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCC 137
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H C
Sbjct: 449 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 506
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMS-ACGN 195
+ ++ G+ D + W + T +H++ + N + S H++S +
Sbjct: 507 VQYDGRRVVSGAYDFMVKVWD----PETETCLHTL-QGHTNRVYSLQFDGIHVVSGSLDT 561
Query: 196 NVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
++++W E G + + +D +++ + D ++++D TG+ L+ +G
Sbjct: 562 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGP 620
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
+ C +K+ + S DG + W L I L+
Sbjct: 621 NKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 661
Score = 171 (65.3 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 61/287 (21%), Positives = 122/287 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K GH V C ++I SG+ D ++ +W TG+ +R H V + ++
Sbjct: 374 KVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 432
Query: 109 SSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
++ISGS D T+ +W+ ++ H C+ + ++ GS D + W +
Sbjct: 433 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 490
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED---YGQEPIVDACFTR 218
+ L+ V A V + + R+ + A VK+W E + + + + ++
Sbjct: 491 GQCLHVLMGHV--AAVRCV-QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 547
Query: 219 --DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
D +++ S D +R++D TG + GH+S + ++ KD+ + G++D +
Sbjct: 548 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNADSTV 603
Query: 277 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W + + TL K C + ++++ + VKLW
Sbjct: 604 KIWDIKTGQCLQTL-QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 649
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 68/291 (23%), Positives = 125/291 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ G + + + D + ++ +D+ +K+WN + T GH V
Sbjct: 413 CLRTLVGHTGGVWSSQMR-D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH 468
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ SG+ D ++ +W++ TGQ + H + V CV++ D V+SG+ D V +W
Sbjct: 469 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 526
Query: 125 DVKSRSH-HPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
D ++ + H +Q L + GS D I W + + I TL G
Sbjct: 527 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGH--- 580
Query: 178 NSLCSHPTRKHIMSACGN---NVKLW---TAE-----EDYGQEPIVDACFTRDCQCILTC 226
SL S K + GN VK+W T + + + C + ++T
Sbjct: 581 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 640
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFR-IECCLDSKDSQIFC--GSSDG 274
S D ++L+D TGE + +SG + + + ++++ C GS +G
Sbjct: 641 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 691
>RGD|1310631 [details] [associations]
symbol:Atg16l1 "autophagy related 16-like 1 (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0000421 "autophagic vacuole
membrane" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310631 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
IPI:IPI00766621 ProteinModelPortal:D3ZLV2
Ensembl:ENSRNOT00000056840 UCSC:RGD:1310631 ArrayExpress:D3ZLV2
Uniprot:D3ZLV2
Length = 605
Score = 186 (70.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 69/331 (20%), Positives = 139/331 (41%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLL-LK-TYGGHAHEVNDA 61
T D G + AV+F+ T G D+++KLW + + K + G +
Sbjct: 294 TASYVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEAFGDKCEFKGSLSGSNAGITSI 353
Query: 62 TAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
+ + + ++D + +W V + H+ KV KF D++ ++SGS D T+
Sbjct: 354 EFDSAGAYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTL 413
Query: 122 MMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
+WD++S+ C ++ Q C + + L I T+ G + + +C
Sbjct: 414 KLWDLRSK------VC---EEMQSLCVLMT---FAFLL----GIKTVF--AGSSCNDIVC 455
Query: 182 SHPTRKHIMSA-CGNNVKLWT--AEEDYGQEPIVDACFTRDCQC----ILTCSTDECLRL 234
T + +MS ++ W +E + ++ D +L+CS D+ L++
Sbjct: 456 ---TEQCVMSGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKI 512
Query: 235 FDKATGELLEEYK--GHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIH 292
D T + + + G K G S + GS+DG +Y W ++ + ++ ++
Sbjct: 513 IDLRTNAIKQSFSAPGFKCGSDWTRVVFSPDGSYVAAGSADGSLYVWSVL-TGKVEKVLS 571
Query: 293 SVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW 322
+ +N++ P+ H++S G+ LW
Sbjct: 572 KQHSSSINAVAWAPSGLHVVSVDKGSRAVLW 602
>UNIPROTKB|E2QUZ3 [details] [associations]
symbol:FBXW7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000060 "positive regulation of protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IEA] [GO:0050821 "protein stabilization"
evidence=IEA] [GO:0045741 "positive regulation of epidermal growth
factor-activated receptor activity" evidence=IEA] [GO:0034644
"cellular response to UV" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0031146
"SCF-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0007219
"Notch signaling pathway" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005783
GO:GO:0005794 GO:GO:0050821 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0070374 GO:GO:0007219 GO:GO:0045741
GO:GO:0003700 SUPFAM:SSF81383 GO:GO:0006974 GO:GO:0016567
GO:GO:0019005 GO:GO:0034644 GO:GO:0032876 GO:GO:2000060
GO:GO:0031146 GO:GO:0007062 GeneTree:ENSGT00690000101849 KO:K10260
CTD:55294 OMA:EECLHTL EMBL:AAEX03010045 RefSeq:XP_867701.2
Ensembl:ENSCAFT00000012962 GeneID:475465 KEGG:cfa:475465
NextBio:20851305 Uniprot:E2QUZ3
Length = 712
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 59/282 (20%), Positives = 124/282 (43%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 396 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 453
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCC 137
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H C
Sbjct: 454 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 511
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMS-ACGN 195
+ ++ G+ D + W + T +H++ + N + S H++S +
Sbjct: 512 VQYDGRRVVSGAYDFMVKVWD----PETETCLHTL-QGHTNRVYSLQFDGIHVVSGSLDT 566
Query: 196 NVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
++++W E G + + +D +++ + D ++++D TG+ L+ +G
Sbjct: 567 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGP 625
Query: 250 KSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
+ C +K+ + S DG + W L I L+
Sbjct: 626 NKHQSAVTCLQFNKNF-VITSSDDGTVKLWDLKTGEFIRNLV 666
Score = 171 (65.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 61/287 (21%), Positives = 122/287 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K GH V C ++I SG+ D ++ +W TG+ +R H V + ++
Sbjct: 379 KVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 437
Query: 109 SSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
++ISGS D T+ +W+ ++ H C+ + ++ GS D + W +
Sbjct: 438 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 495
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED---YGQEPIVDACFTR 218
+ L+ V A V + + R+ + A VK+W E + + + + ++
Sbjct: 496 GQCLHVLMGHV--AAVRCV-QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 552
Query: 219 --DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
D +++ S D +R++D TG + GH+S + ++ KD+ + G++D +
Sbjct: 553 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNADSTV 608
Query: 277 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W + + TL K C + ++++ + VKLW
Sbjct: 609 KIWDIKTGQCLQTL-QGPNKHQSAVTCLQFNKNFVITSSDDGTVKLW 654
Score = 161 (61.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 68/291 (23%), Positives = 125/291 (42%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ G + + + D + ++ +D+ +K+WN + T GH V
Sbjct: 418 CLRTLVGHTGGVWSSQMR-D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH 473
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ SG+ D ++ +W++ TGQ + H + V CV++ D V+SG+ D V +W
Sbjct: 474 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 531
Query: 125 DVKSRSH-HPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
D ++ + H +Q L + GS D I W + + I TL G
Sbjct: 532 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGH--- 585
Query: 178 NSLCSHPTRKHIMSACGN---NVKLW---TAE-----EDYGQEPIVDACFTRDCQCILTC 226
SL S K + GN VK+W T + + + C + ++T
Sbjct: 586 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITS 645
Query: 227 STDECLRLFDKATGELLEEYKGHKSGDFR-IECCLDSKDSQIFC--GSSDG 274
S D ++L+D TGE + +SG + + + ++++ C GS +G
Sbjct: 646 SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 696
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 147 (56.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 53/216 (24%), Positives = 97/216 (44%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCL-TCGSDKKIKLW--NPYRNLLLKTYGGHAHEVND 60
T + T+ + F+ S CL TC DK I+++ N + L GH + V+
Sbjct: 3 TLIHTLTDHSDDVNCCAFS---SSCLATCSLDKTIRIYSLNDFTELPYSPLKGHTYAVHC 59
Query: 61 ATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHA-SKVTCVKFNEDSSVVISGSQDN 119
+ +AS ++D + I+W+ + G+ + + S V +F+ +S+ ++SG+ D
Sbjct: 60 CCFSPSGHTLASCSTDGATIIWDTSDGRMLAVLEQPTGSPVRVCRFSPESTYLVSGAADG 119
Query: 120 TVMMWDVKS----RSHH----PIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIH 170
+V++W+V S RS + + C S F GSS G + W + H
Sbjct: 120 SVVLWNVHSMKFYRSGNVKDGSLVACAFSPGGNFFVTGSSCGDLTVWDDKMRCLCNEKAH 179
Query: 171 SVGKAVVNSLCSHPTR--KHI-----MSACGNNVKL 199
+G + + SHP +H M++CG + K+
Sbjct: 180 DLGVTCCD-ISSHPVSDGEHASGCFQMASCGQDNKI 214
Score = 134 (52.2 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 30 TCGSDKKIKLWNP-YRNLL---LK---TYGGHAHEVNDATAACDSSQIASGASDKSVILW 82
+CG D KIK+W + + L L+ T GH+ V + D + SG+ DK VI++
Sbjct: 207 SCGQDNKIKVWFILFADFLGGELRYKCTLSGHSAPVLTCAFSYDGQMLVSGSVDKCVIIY 266
Query: 83 EVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 129
E TG + +H VT F S + +GS D TV +W + ++
Sbjct: 267 ETNTGNILHTLSQHTRYVTTCAFAPCSLFLATGSMDKTVHIWKLDNK 313
Score = 81 (33.6 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 19/77 (24%), Positives = 37/77 (48%)
Query: 210 PIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC 269
P++ F+ D Q +++ S D+C+ +++ TG +L H + C +
Sbjct: 241 PVLTCAFSYDGQMLVSGSVDKCVIIYETNTGNILHTLSQHTR--YVTTCAFAPCSLFLAT 298
Query: 270 GSSDGKIYKWQLVDSSQ 286
GS D ++ W+L D+ Q
Sbjct: 299 GSMDKTVHIWKL-DNKQ 314
>CGD|CAL0005182 [details] [associations]
symbol:orf19.5413 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0000974 "Prp19 complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005182 GO:GO:0005737 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
GO:GO:0007049 EMBL:AACQ01000051 EMBL:AACQ01000050 KO:K12862
RefSeq:XP_717691.1 RefSeq:XP_717785.1 ProteinModelPortal:Q5A7Q3
STRING:Q5A7Q3 GeneID:3640515 GeneID:3640625 KEGG:cal:CaO19.12868
KEGG:cal:CaO19.5413 Uniprot:Q5A7Q3
Length = 389
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 58/216 (26%), Positives = 95/216 (43%)
Query: 2 EYTCVQTI-DCKQGAIRAVRFN-VDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVN 59
E+ ++T+ QG IRA+ + + + +T +D IK+W+ N L GH +
Sbjct: 73 EWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIR 132
Query: 60 DATAACDSSQIASGASDKSVILWEVT-----TGQPVRRWREHASKVTCVKFNEDSSVVIS 114
+ + SG DKS+ W++ G +R + H V + + + V+ S
Sbjct: 133 SLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFS 192
Query: 115 GSQDNTVMMWDVKSR-------SH-HPIQCC-LDSKDSQIFCGSSDGKIYKWQLVDSSQI 165
G +D V +WD++SR H + I D D Q+ S DG I W L S+
Sbjct: 193 GGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDL-RKSKT 251
Query: 166 STLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
LI + K++ S+ SHP +S N +K W
Sbjct: 252 ELLITNHSKSI-RSMKSHPKEATFVSGDSNGEIKQW 286
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 37/158 (23%), Positives = 72/158 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQI 70
IR++ + Y + G DK ++ W+ R+ +++Y GH V + +
Sbjct: 131 IRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVL 190
Query: 71 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSR 129
SG D V +W++ + H + +T ++ + + VI+ S D T+ +WD+ KS+
Sbjct: 191 FSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSK 250
Query: 130 S------HHPIQCCLDS--KDSQIFCGSSDGKIYKWQL 159
+ H + S K++ G S+G+I +W L
Sbjct: 251 TELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLL 288
>UNIPROTKB|Q5A7Q3 [details] [associations]
symbol:PRP46 "Pre-mRNA-splicing factor PRP46"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005182 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0005681 GO:GO:0007049 EMBL:AACQ01000051
EMBL:AACQ01000050 KO:K12862 RefSeq:XP_717691.1 RefSeq:XP_717785.1
ProteinModelPortal:Q5A7Q3 STRING:Q5A7Q3 GeneID:3640515
GeneID:3640625 KEGG:cal:CaO19.12868 KEGG:cal:CaO19.5413
Uniprot:Q5A7Q3
Length = 389
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 58/216 (26%), Positives = 95/216 (43%)
Query: 2 EYTCVQTI-DCKQGAIRAVRFN-VDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVN 59
E+ ++T+ QG IRA+ + + + +T +D IK+W+ N L GH +
Sbjct: 73 EWKLLRTLAGAHQGWIRAIALDEITNKWYVTGSADSTIKIWDFENNSLKAVLTGHVLGIR 132
Query: 60 DATAACDSSQIASGASDKSVILWEVT-----TGQPVRRWREHASKVTCVKFNEDSSVVIS 114
+ + SG DKS+ W++ G +R + H V + + + V+ S
Sbjct: 133 SLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVLFS 192
Query: 115 GSQDNTVMMWDVKSR-------SH-HPIQCC-LDSKDSQIFCGSSDGKIYKWQLVDSSQI 165
G +D V +WD++SR H + I D D Q+ S DG I W L S+
Sbjct: 193 GGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDL-RKSKT 251
Query: 166 STLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
LI + K++ S+ SHP +S N +K W
Sbjct: 252 ELLITNHSKSI-RSMKSHPKEATFVSGDSNGEIKQW 286
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 37/158 (23%), Positives = 72/158 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRN-----LLLKTYGGHAHEVNDATAACDSSQI 70
IR++ + Y + G DK ++ W+ R+ +++Y GH V + +
Sbjct: 131 IRSLCISKRHPYLFSGGEDKSLRCWDLERSNSDAGCQIRSYHGHLGGVYSIGLHPELDVL 190
Query: 71 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV-KSR 129
SG D V +W++ + H + +T ++ + + VI+ S D T+ +WD+ KS+
Sbjct: 191 FSGGKDCVVRVWDIRSRVEAMTLLGHTNDITSIETDYNDPQVITSSMDGTIRLWDLRKSK 250
Query: 130 S------HHPIQCCLDS--KDSQIFCGSSDGKIYKWQL 159
+ H + S K++ G S+G+I +W L
Sbjct: 251 TELLITNHSKSIRSMKSHPKEATFVSGDSNGEIKQWLL 288
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 65/285 (22%), Positives = 113/285 (39%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G I +RF DG+ T +D + LWN + + H+ VN + + +AS
Sbjct: 19 GGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWSPKGNLVASA 78
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
D++V +WE + H+ V V F+ ++++ S D + +W V R
Sbjct: 79 GHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAKIWRVARRQFVS 138
Query: 131 -----HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQ-ISTLIHSVGKAVVNSLCSHP 184
++ ++ S + ++ +SD K + VDS + + T +A L HP
Sbjct: 139 SFAQQNNWVRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEE--RAAPRQLAWHP 196
Query: 185 TRKHIMSACG-NNVKLWTAEED-----Y--GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ A G N +K++ Y P+ D F +L+ S D +R+ D
Sbjct: 197 WGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFHPSGHFLLSGSDDRTIRILD 256
Query: 237 KATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQ 280
G + GH + S+D F G SD ++ WQ
Sbjct: 257 LLEGRPIYTLTGHTDA---VNAVAFSRDGDKFATGGSDRQLLVWQ 298
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/146 (22%), Positives = 65/146 (44%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV+T ++ A R + ++ G+ +IK+++ + LL+ Y H+ VND
Sbjct: 178 CVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAFH 237
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ SG+ D+++ + ++ G+P+ H V V F+ D +G D +++W
Sbjct: 238 PSGHFLLSGSDDRTIRILDLLEGRPIYTLTGHTDAVNAVAFSRDGDKFATGGSDRQLLVW 297
Query: 125 DVKSRSHHPIQCCLDSKDSQIFCGSS 150
++ Q S + C SS
Sbjct: 298 QSNLHTYDASQFEAKSALASSSCESS 323
Score = 116 (45.9 bits), Expect = 0.00048, P = 0.00048
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 47 LLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFN 106
L + + GH+ + D +QIA+ ++D +VILW + R+ H++ V V ++
Sbjct: 10 LERHFTGHSGGITQLRFGPDGAQIATSSTDSTVILWNLNQAARCIRFASHSAPVNGVAWS 69
Query: 107 EDSSVVISGSQDNTVMMWDVKSR 129
++V S D TV +W+ K R
Sbjct: 70 PKGNLVASAGHDRTVKIWEPKLR 92
>UNIPROTKB|O60508 [details] [associations]
symbol:CDC40 "Pre-mRNA-processing factor 17" species:9606
"Homo sapiens" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0006369
"termination of RNA polymerase II transcription" evidence=TAS]
[GO:0006406 "mRNA export from nucleus" evidence=TAS] [GO:0008380
"RNA splicing" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0031124 "mRNA 3'-end processing" evidence=TAS]
Reactome:REACT_71 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF038392 GO:GO:0005654 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Reactome:REACT_1675 GO:GO:0006406 GO:GO:0000398 GO:GO:0071013
KO:K12816 Reactome:REACT_1788 GO:GO:0006369 GO:GO:0031124
Reactome:REACT_78 EMBL:AL671518 EMBL:AK314601 EMBL:BC117145
EMBL:BC126114 EMBL:AF061241 EMBL:AF015044 IPI:IPI00026307
RefSeq:NP_056975.1 UniGene:Hs.428147 ProteinModelPortal:O60508
SMR:O60508 IntAct:O60508 STRING:O60508 PhosphoSite:O60508
PaxDb:O60508 PRIDE:O60508 DNASU:51362 Ensembl:ENST00000307731
Ensembl:ENST00000368932 GeneID:51362 KEGG:hsa:51362 UCSC:uc003pua.3
CTD:51362 GeneCards:GC06P110501 HGNC:HGNC:17350 MIM:605585
neXtProt:NX_O60508 PharmGKB:PA134891332 HOGENOM:HOG000214672
HOVERGEN:HBG053695 InParanoid:O60508 OMA:KRQKRGK OrthoDB:EOG4HQDHZ
PhylomeDB:O60508 GenomeRNAi:51362 NextBio:54822 PMAP-CutDB:O60508
ArrayExpress:O60508 Bgee:O60508 CleanEx:HS_CDC40
Genevestigator:O60508 GermOnline:ENSG00000168438 Uniprot:O60508
Length = 579
Score = 185 (70.2 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 54/176 (30%), Positives = 87/176 (49%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPY-RNLLLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y L+T+ GH+ V D +Q S
Sbjct: 291 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSA 350
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 351 AYDRYLKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 408
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 409 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 464
Score = 135 (52.6 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 43/215 (20%), Positives = 90/215 (41%)
Query: 2 EYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVN 59
E C++T A+R + FN G+ L+ D+ +KLW+ + + + V
Sbjct: 321 ERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVK 380
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D
Sbjct: 381 FNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDK 440
Query: 120 TVMMWD---------VKSRSHHPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLI 169
++ +W+ + S H + S + + + C S D +I + + +++
Sbjct: 441 SLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKK 500
Query: 170 HSVGKAVVNSLCS---HPTRKHIMSACGNN-VKLW 200
G V C P +++S GN + +W
Sbjct: 501 IFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
>UNIPROTKB|G4MQX3 [details] [associations]
symbol:MGG_04719 "Guanine nucleotide-binding protein
subunit beta-like protein" species:242507 "Magnaporthe oryzae
70-15" [GO:0005575 "cellular_component" evidence=ND] [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 GO:GO:0043581 KO:K14753
RefSeq:XP_003710816.1 ProteinModelPortal:G4MQX3 SMR:G4MQX3
EnsemblFungi:MGG_04719T0 GeneID:2677887 KEGG:mgr:MGG_04719
Uniprot:G4MQX3
Length = 316
Score = 179 (68.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 52/194 (26%), Positives = 90/194 (46%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG+Y L+ DK ++LW + + GH ++V + + D+ QI SG+ D+S+ LW
Sbjct: 74 DGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSIKLWN 133
Query: 84 VTTGQPVRRWRE--HASKVTCVKF--NEDSSVVISGSQDNTVMMWDVKS----RSH--HP 133
T G E H+ V+CV+F N + V++S D V +W++ S H H
Sbjct: 134 -TLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHT 192
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIM 190
I S D + G DG W L +S + +L +++L P R +
Sbjct: 193 GYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLN---ANDEIHALVFSPNRYWLC 249
Query: 191 SACGNNVKLWTAEE 204
+A +++ ++ E+
Sbjct: 250 AATASSIIIFDLEK 263
Score = 168 (64.2 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 54/217 (24%), Positives = 100/217 (46%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYG-----GHAHEVNDA 61
T++ G + ++ +++ L S DK + +WN R+ Y GH+H V+D
Sbjct: 10 TLEGHNGWVTSLATSMENPNMLLSSSRDKTLIIWNLTRDETSYGYPKRSLKGHSHIVSDC 69
Query: 62 TAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
+ D + S + DK++ LWE+ TG RR+ H + V V F+ D+ ++SGS+D ++
Sbjct: 70 VISSDGAYALSASWDKTLRLWELATGTTTRRFVGHTNDVLSVSFSADNRQIVSGSRDRSI 129
Query: 122 MMWD--------VKSRSHHP-IQCCLDSKDSQ--IFCGSSDGKIYK-WQLVDSSQISTLI 169
+W+ + + H + C S + Q + S K+ K W+L S ++ T
Sbjct: 130 KLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVSSGWDKLVKVWEL-SSCKLQT-D 187
Query: 170 HSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWTAEE 204
H +N++ P + ++ G + LW E
Sbjct: 188 HIGHTGYINTVTISPDGS-LCASGGKDGTTMLWDLNE 223
Score = 125 (49.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 32/119 (26%), Positives = 54/119 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLK-TYGGHAHEVNDATAACDSSQ--IAS 72
+ +V F+ D ++ D+ IKLWN + T GH+ V+ + + I S
Sbjct: 108 VLSVSFSADNRQIVSGSRDRSIKLWNTLGDCKYTITEKGHSEWVSCVRFSPNPQNPVIVS 167
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
DK V +WE+++ + H + V + D S+ SG +D T M+WD+ H
Sbjct: 168 SGWDKLVKVWELSSCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKH 226
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 149 (57.5 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 37/117 (31%), Positives = 62/117 (52%)
Query: 21 FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAAC-----DSSQIAS 72
F+ D +Y ++ D I++WN L K A + + DA C DS +A+
Sbjct: 222 FSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQDNLMMMDAAVRCISFSRDSEMLAT 281
Query: 73 GASDKSVILWEVTTGQPVRRW-REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
G+ D + +W+V TG +RR+ R H V V+F++D+S ++SG D+ V + +KS
Sbjct: 282 GSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKS 338
Score = 143 (55.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 34/129 (26%), Positives = 64/129 (49%)
Query: 1 MEYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG-GHAHEVN 59
++Y + A+R + F+ D T D KIK+W L+ + H V
Sbjct: 252 LKYQAQDNLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVC 311
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
+ D+S I SG +D V + + +G+ ++ R H+S +T V+++++ + +IS S D
Sbjct: 312 AVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDG 371
Query: 120 TVMMWDVKS 128
++ +W KS
Sbjct: 372 SIRVWHGKS 380
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 47/214 (21%), Positives = 92/214 (42%)
Query: 5 CVQTID-CKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
C++ D + AVRF+ D S+ L+ G+D +++ LK GH+ + D
Sbjct: 298 CLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRY 357
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKF----NEDSSVVISGSQDN 119
+ + + I S ++D S+ +W +G+ + +R + + D +I ++ N
Sbjct: 358 SDEGNHIISCSTDGSIRVWHGKSGECLSTFRVGSEDYPILNVIPIPKSDPPQMIVCNRSN 417
Query: 120 TVMMWDV-----------KSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 168
T+ + ++ K I C L K + + DG +Y + ++ + +TL
Sbjct: 418 TLYVVNISGQVVRTMTSGKREKGDFINCILSPKGEWAYAIAEDGVMYCFMVLSGTLETTL 477
Query: 169 IHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWT 201
V + + L HP + I S + + KLWT
Sbjct: 478 --PVTERLPIGLAHHPHQNLIASYAEDGLLKLWT 509
Score = 79 (32.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 45/184 (24%), Positives = 78/184 (42%)
Query: 148 GSSDGKIYKWQLVDSSQISTLIHS-VGKAVVNSLCSHPTRK-HIMSA-CGNNVKLWTAEE 204
G GK K SS I+ + +S G +++ R H S C + ++ E
Sbjct: 335 GMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGECLSTFRV--GSE 392
Query: 205 DYGQEPIVDACFT--RDCQCILTCSTDECLRLFDKATGELLEEYKGHK--SGDFRIECCL 260
DY PI++ D ++ C+ L + + +G+++ K GDF I C L
Sbjct: 393 DY---PILNVIPIPKSDPPQMIVCNRSNTLYVVN-ISGQVVRTMTSGKREKGDF-INCIL 447
Query: 261 DSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV- 319
K + + DG +Y + ++ + +TL V + + L HP + I S + +
Sbjct: 448 SPKGEWAYAIAEDGVMYCFMVLSGTLETTL--PVTERLPIGLAHHPHQNLIASYAEDGLL 505
Query: 320 KLWT 323
KLWT
Sbjct: 506 KLWT 509
>UNIPROTKB|I3L3N5 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005874 InterPro:IPR017252
PANTHER:PTHR22847:SF51 HGNC:HGNC:8574 ChiTaRS:PAFAH1B1
EMBL:AC015799 EMBL:AC005696 Ensembl:ENST00000574468 Bgee:I3L3N5
Uniprot:I3L3N5
Length = 208
Score = 162 (62.1 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 33 SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRR 92
+D IKLW+ ++T GH H V+ + I S + DK++ +WEV TG V+
Sbjct: 2 ADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKT 61
Query: 93 WREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCCLDSKDSQ 144
+ H V V+ N+D +++ S S D TV +W V + R H H ++C + +S
Sbjct: 62 FTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS 121
Query: 145 IFCGSSDGKIYKWQLVDSSQI-STLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTA 202
SS + ++ + + L HS GK +++ C+ + +K A
Sbjct: 122 Y---SSISEATGSEVGHDNWVRGVLFHSGGKFILS--CADDKTLRVWDYKNKRCMKTLNA 176
Query: 203 EEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
E + + F + ++T S D+ +++++
Sbjct: 177 HEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 206
Score = 144 (55.7 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 14 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 73
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS + +
Sbjct: 74 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 133
Query: 123 MWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLC 181
D + ++ L + +D K + W + + TL + + V SL
Sbjct: 134 GHD------NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLD 185
Query: 182 SHPTRKHIMS-ACGNNVKLW 200
H T ++++ + VK+W
Sbjct: 186 FHKTAPYVVTGSVDQTVKVW 205
Score = 108 (43.1 bits), Expect = 0.00094, P = 0.00094
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGA 74
+R V F+ G + L+C DK +++W+ Y+N +KT H H V + + +G+
Sbjct: 139 VRGVLFHSGGKFILSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 197
Query: 75 SDKSVILWE 83
D++V +WE
Sbjct: 198 VDQTVKVWE 206
>ZFIN|ZDB-GENE-090313-79 [details] [associations]
symbol:fbxw7 "F-box and WD repeat domain containing
7" species:7955 "Danio rerio" [GO:0045746 "negative regulation of
Notch signaling pathway" evidence=IMP] [GO:0001525 "angiogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256 SMART:SM00320
ZFIN:ZDB-GENE-090313-79 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0001525 SUPFAM:SSF81383 GO:GO:0045746
GeneTree:ENSGT00690000101849 EMBL:AL953881 IPI:IPI00499035
Ensembl:ENSDART00000086512 Bgee:F1RCB5 Uniprot:F1RCB5
Length = 760
Score = 186 (70.5 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 61/283 (21%), Positives = 124/283 (43%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G+ ++ D +K+W+ L+T GH V ++ + I SG++D+++ +W
Sbjct: 444 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV--WSSQMRDNIIISGSTDRTLKVWNA 501
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCC 137
TG+ + H S V C+ +E V+SGS+D T+ +WD+++ H C
Sbjct: 502 ETGECIHTLYGHTSTVRCMHLHEKR--VVSGSRDATLRVWDIETGQCLHVLMGHVAAVRC 559
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK-HIMS-ACGN 195
+ ++ G+ D + W + T +H++ + N + S H++S +
Sbjct: 560 VQYDGRRVVSGAYDFMVKVWD----PETETCLHTL-QGHTNRVYSLQFDGIHVVSGSLDT 614
Query: 196 NVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKG- 248
++++W E G + + +D +++ + D ++++D TG+ L+ +G
Sbjct: 615 SIRVWDVETGNCIHTLTGHQSLTSGMELKD-NILVSGNADSTVKIWDIKTGQCLQTLQGP 673
Query: 249 HKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
HK CL + + S DG + W L I L+
Sbjct: 674 HKHQS--AVTCLQFNKNFVITSSDDGTVKLWDLRTGEFIRNLV 714
Score = 172 (65.6 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 63/289 (21%), Positives = 124/289 (42%)
Query: 49 KTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNED 108
K GH V C ++I SG+ D ++ +W TG+ +R H V + ++
Sbjct: 427 KVLKGHDDHVITCLQFC-GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDN 485
Query: 109 SSVVISGSQDNTVMMWDVKSRS-------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVD 161
++ISGS D T+ +W+ ++ H C+ + ++ GS D + W +
Sbjct: 486 --IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIET 543
Query: 162 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEED---YGQEPIVDACFTR 218
+ L+ V A V + + R+ + A VK+W E + + + + ++
Sbjct: 544 GQCLHVLMGHV--AAVRCV-QYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 600
Query: 219 --DCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
D +++ S D +R++D TG + GH+S + ++ KD+ + G++D +
Sbjct: 601 QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNADSTV 656
Query: 277 YKWQLVDSSQISTLI--HSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
W + + TL H AV C + ++++ + VKLW
Sbjct: 657 KIWDIKTGQCLQTLQGPHKHQSAVT---CLQFNKNFVITSSDDGTVKLW 702
Score = 164 (62.8 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 69/292 (23%), Positives = 126/292 (43%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C++T+ G + + + D + ++ +D+ +K+WN + T GH V
Sbjct: 466 CLRTLVGHTGGVWSSQMR-D-NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR--CMH 521
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ SG+ D ++ +W++ TGQ + H + V CV++ D V+SG+ D V +W
Sbjct: 522 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVW 579
Query: 125 DVKSRSH-HPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVV 177
D ++ + H +Q L + GS D I W + + I TL G
Sbjct: 580 DPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTL---TGH--- 633
Query: 178 NSLCSHPTRKHIMSACGN---NVKLW---------TAEEDYGQEPIVDACFTRDCQCILT 225
SL S K + GN VK+W T + + + V C + ++T
Sbjct: 634 QSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPHKHQSAV-TCLQFNKNFVIT 692
Query: 226 CSTDECLRLFDKATGELLEEYKGHKSGDFR-IECCLDSKDSQIFC--GSSDG 274
S D ++L+D TGE + +SG + + + ++++ C GS +G
Sbjct: 693 SSDDGTVKLWDLRTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 744
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 185 (70.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 48/185 (25%), Positives = 86/185 (46%)
Query: 27 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
+ L+C D +LW+ + Y GH + D + A+ + D++ LW+V
Sbjct: 417 FILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFGYYFATASHDQTARLWDVEH 476
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHH-PIQC-C 137
P+R + H + V CV F+ +++ + +GS D+T MWDV++ +HH P+ C
Sbjct: 477 AAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALC 536
Query: 138 LDSKDSQIFCGSSDGKIYKWQLVDSSQ-ISTLIHSVGKAVVNSLC-SHPTRKHIMSACGN 195
+ + + G I W L S+Q +S + HS ++V SL S+ + +
Sbjct: 537 MSADGLSLASADESGIIKVWDLRSSNQHVSFVKHS---SIVYSLSFSYDNKILVSGGADT 593
Query: 196 NVKLW 200
+V W
Sbjct: 594 DVNFW 598
Score = 161 (61.7 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 41/157 (26%), Positives = 78/157 (49%)
Query: 19 VRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 78
V+F+ G Y T D+ +LW+ L+ + GH ++V+ + +++ +A+G+SD +
Sbjct: 451 VQFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHT 510
Query: 79 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHH------ 132
+W+V TG VR + H S V+ + + D + S + + +WD++S + H
Sbjct: 511 TRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKH 570
Query: 133 -PIQCCLD-SKDSQIFC-GSSDGKIYKWQLVDSSQIS 166
I L S D++I G +D + W L + +S
Sbjct: 571 SSIVYSLSFSYDNKILVSGGADTDVNFWDLTYRNNLS 607
Score = 129 (50.5 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 28/120 (23%), Positives = 59/120 (49%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
Q + V F+ + +Y T SD ++W+ ++ + H V+ + D +AS
Sbjct: 487 QNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLAS 546
Query: 73 GASDKSVI-LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
A + +I +W++ + + +H+S V + F+ D+ +++SG D V WD+ R++
Sbjct: 547 -ADESGIIKVWDLRSSNQHVSFVKHSSIVYSLSFSYDNKILVSGGADTDVNFWDLTYRNN 605
>UNIPROTKB|F1MBS9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:DAAA02025907 IPI:IPI00707746
UniGene:Bt.35848 Ensembl:ENSBTAT00000000526 Uniprot:F1MBS9
Length = 579
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y + L+T+ GH+ V D +Q S
Sbjct: 291 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 350
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 351 AYDRYLKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 408
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 409 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 464
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/212 (19%), Positives = 89/212 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDAT 62
C++T A+R + FN G+ L+ D+ +KLW+ + + + V
Sbjct: 324 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 443
Query: 123 MWD---------VKSRSHHPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+W+ + S H + S + + + C S D +I + + +++
Sbjct: 444 VWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFK 503
Query: 173 GKAVVNSLCS---HPTRKHIMSACGNN-VKLW 200
G V C P +++S GN + +W
Sbjct: 504 GHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
>UNIPROTKB|F1RSY9 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 KO:K12816 CTD:51362 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:CU915312 RefSeq:XP_003121400.3
UniGene:Ssc.95331 Ensembl:ENSSSCT00000004866 GeneID:100511111
KEGG:ssc:100511111 Uniprot:F1RSY9
Length = 579
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y + L+T+ GH+ V D +Q S
Sbjct: 291 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 350
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 351 AYDRYLKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 408
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 409 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 464
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/212 (19%), Positives = 89/212 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDAT 62
C++T A+R + FN G+ L+ D+ +KLW+ + + + V
Sbjct: 324 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 443
Query: 123 MWD---------VKSRSHHPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+W+ + S H + S + + + C S D +I + + +++
Sbjct: 444 VWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFK 503
Query: 173 GKAVVNSLCS---HPTRKHIMSACGNN-VKLW 200
G V C P +++S GN + +W
Sbjct: 504 GHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
>MGI|MGI:1918963 [details] [associations]
symbol:Cdc40 "cell division cycle 40" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1918963 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006397 GO:GO:0071013
KO:K12816 CTD:51362 HOGENOM:HOG000214672 HOVERGEN:HBG053695
OMA:KRQKRGK OrthoDB:EOG4HQDHZ EMBL:AK004569 EMBL:BC147503
EMBL:BC158078 IPI:IPI00120145 RefSeq:NP_082155.1 UniGene:Mm.46063
ProteinModelPortal:Q9DC48 SMR:Q9DC48 STRING:Q9DC48
PhosphoSite:Q9DC48 PaxDb:Q9DC48 PRIDE:Q9DC48
Ensembl:ENSMUST00000044166 GeneID:71713 KEGG:mmu:71713
UCSC:uc007exe.2 GeneTree:ENSGT00530000063583 InParanoid:B2RY33
ChiTaRS:CDC40 NextBio:334307 Bgee:Q9DC48 CleanEx:MM_CDC40
Genevestigator:Q9DC48 GermOnline:ENSMUSG00000038446 Uniprot:Q9DC48
Length = 579
Score = 184 (69.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y + L+T+ GH+ V D +Q S
Sbjct: 291 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 350
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 351 AYDRYLKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 408
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 409 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 464
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/212 (19%), Positives = 89/212 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDAT 62
C++T A+R + FN G+ L+ D+ +KLW+ + + + V
Sbjct: 324 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 383
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++
Sbjct: 384 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 443
Query: 123 MWD---------VKSRSHHPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+W+ + S H + S + + + C S D +I + + +++
Sbjct: 444 VWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFK 503
Query: 173 GKAVVNSLCS---HPTRKHIMSACGNN-VKLW 200
G V C P +++S GN + +W
Sbjct: 504 GHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 535
>UNIPROTKB|O14727 [details] [associations]
symbol:APAF1 "Apoptotic protease-activating factor 1"
species:9606 "Homo sapiens" [GO:0006952 "defense response"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0006309
"apoptotic DNA fragmentation" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000166 "nucleotide binding" evidence=TAS]
[GO:0008656 "cysteine-type endopeptidase activator activity
involved in apoptotic process" evidence=NAS] [GO:0008635
"activation of cysteine-type endopeptidase activity involved in
apoptotic process by cytochrome c" evidence=IDA;TAS] [GO:0042981
"regulation of apoptotic process" evidence=TAS] [GO:0043293
"apoptosome" evidence=IDA;TAS] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IDA] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006915
"apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] Reactome:REACT_578 InterPro:IPR017986
InterPro:IPR000767 InterPro:IPR001315 InterPro:IPR001680
InterPro:IPR002182 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619
Pfam:PF00931 PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209
PROSITE:PS50294 SMART:SM00320 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 Pathway_Interaction_DB:p75ntrpathway GO:GO:0007399
GO:GO:0006952 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0000166 DrugBank:DB00171 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900 GO:GO:0051402
Pathway_Interaction_DB:caspase_pathway EMBL:CH471054 GO:GO:0043531
GO:GO:0001843 GO:GO:0097193 GO:GO:0006309 GO:GO:0008656
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
OrthoDB:EOG43TZTP GO:GO:0043293 EMBL:AF013263 EMBL:AJ243003
EMBL:AJ243004 EMBL:AJ243005 EMBL:AJ243006 EMBL:AJ243007
EMBL:AJ243008 EMBL:AJ243009 EMBL:AJ243010 EMBL:AJ243011
EMBL:AJ243048 EMBL:AJ243107 EMBL:AF134397 EMBL:AF149794
EMBL:AB007873 EMBL:AB103079 EMBL:BC136531 EMBL:BC136532
EMBL:AJ133643 EMBL:AJ133644 EMBL:AJ133645 EMBL:AF248734
IPI:IPI00023630 IPI:IPI00217460 IPI:IPI00217461 IPI:IPI00217462
IPI:IPI00217463 IPI:IPI00375875 PIR:T03818 RefSeq:NP_001151.1
RefSeq:NP_037361.1 RefSeq:NP_863651.1 RefSeq:NP_863658.1
RefSeq:NP_863659.1 UniGene:Hs.552567 PDB:1C15 PDB:1CWW PDB:1CY5
PDB:1Z6T PDB:2P1H PDB:2YGS PDB:3IZA PDB:3YGS PDBsum:1C15
PDBsum:1CWW PDBsum:1CY5 PDBsum:1Z6T PDBsum:2P1H PDBsum:2YGS
PDBsum:3IZA PDBsum:3YGS ProteinModelPortal:O14727 SMR:O14727
DIP:DIP-27624N IntAct:O14727 MINT:MINT-96751 STRING:O14727
PhosphoSite:O14727 PaxDb:O14727 PRIDE:O14727
Ensembl:ENST00000333991 Ensembl:ENST00000357310
Ensembl:ENST00000359972 Ensembl:ENST00000547045
Ensembl:ENST00000550527 Ensembl:ENST00000551964
Ensembl:ENST00000552268 GeneID:317 KEGG:hsa:317 UCSC:uc001tfy.3
UCSC:uc001tfz.3 UCSC:uc001tga.3 UCSC:uc001tgb.3 UCSC:uc001tgc.3
CTD:317 GeneCards:GC12P099039 HGNC:HGNC:576 HPA:HPA031373
MIM:602233 neXtProt:NX_O14727 PharmGKB:PA24868 HOVERGEN:HBG018730
InParanoid:O14727 KO:K02084 OMA:KVCKNSA PhylomeDB:O14727
Pathway_Interaction_DB:hivnefpathway BindingDB:O14727
ChEMBL:CHEMBL1795093 EvolutionaryTrace:O14727 GenomeRNAi:317
NextBio:1287 PMAP-CutDB:O14727 ArrayExpress:O14727 Bgee:O14727
Genevestigator:O14727 GermOnline:ENSG00000120868 InterPro:IPR017251
PIRSF:PIRSF037646 Uniprot:O14727
Length = 1248
Score = 161 (61.7 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 35/122 (28%), Positives = 59/122 (48%)
Query: 9 IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDA--TAACD 66
I + + F+ D + TC DKK+K+WN L+ TY H+ +VN T +
Sbjct: 653 IKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSH 712
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+A+G+SD + LW++ + H + V +F+ D ++ S S D T+ +WD
Sbjct: 713 HLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDA 772
Query: 127 KS 128
S
Sbjct: 773 TS 774
Score = 155 (59.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 40/155 (25%), Positives = 71/155 (45%)
Query: 21 FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 80
F+ DG +CG+DK ++++ L H EV + D IA+ + DK V
Sbjct: 623 FSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVK 682
Query: 81 LWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSRS-------H 131
+W TG+ V + EH+ +V C F S ++ +GS D + +WD+ + H
Sbjct: 683 IWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGH 742
Query: 132 -HPIQCCLDSKDSQIFCG-SSDGKIYKWQLVDSSQ 164
+ + C S D ++ S+DG + W +++
Sbjct: 743 TNSVNHCRFSPDDKLLASCSADGTLKLWDATSANE 777
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/120 (30%), Positives = 57/120 (47%)
Query: 209 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ + ACF+ D Q I +C D+ L++F TGE L E K H+ + CC S D +
Sbjct: 616 DAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHED---EVLCCAFSTDDRFI 672
Query: 269 CGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 322
S D K+ W +S L+H+ + C H T H++ A G++ +KLW
Sbjct: 673 ATCSVDKKVKIW----NSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLW 728
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 48/197 (24%), Positives = 85/197 (43%)
Query: 19 VRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 78
++F D ++ D +I++WN + + GH V D +S++ S + D +
Sbjct: 1009 IQFTADEKTLISSSDDAEIQVWNWQLDKCI-FLRGHQETVKDFRLL-KNSRLLSWSFDGT 1066
Query: 79 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW--DV-----KSRSH 131
V +W + TG + + H V + D++ S S D T +W D+ + R H
Sbjct: 1067 VKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGH 1126
Query: 132 HP-IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSS--QISTLIHSVGKAV----VNSLCSH 183
+ ++C S DS + G +G+I W + + + + G A V LC
Sbjct: 1127 NGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFS 1186
Query: 184 PTRKHIMSACGNNVKLW 200
P K ++SA G +K W
Sbjct: 1187 PDGKMLISA-GGYIKWW 1202
Score = 128 (50.1 bits), Expect = 0.00011, P = 0.00011
Identities = 64/325 (19%), Positives = 142/325 (43%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLL-KTYGGHAHEVNDATAACDSSQIASGA 74
++ ++ DG+ + +K I L++ + + LL + + GH + + +
Sbjct: 801 VKCCSWSADGARIMVAAKNK-IFLFDIHTSGLLGEIHTGHHSTIQYCDFSPQNHLAVVAL 859
Query: 75 SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS---RSH 131
S V LW + V R H S V V F+ D S ++ S D T+ +W+ K S
Sbjct: 860 SQYCVELWNTDSRSKVADCRGHLSWVHGVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSA 919
Query: 132 HPIQCCLDS--KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
++ +D +++++ + D I + QL++ + I + +A V+ C P ++I
Sbjct: 920 VMLKQEVDVVFQENEVMVLAVD-HIRRLQLINGR--TGQIDYLTEAQVSCCCLSPHLQYI 976
Query: 190 MSACGN---------NVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATG 240
N N +++ + + ++ + FT D + +++ S D +++++
Sbjct: 977 AFGDENGAIEILELVNNRIFQSRFQH-KKTVWHIQFTADEKTLISSSDDAEIQVWNWQLD 1035
Query: 241 ELLEEYKGHKSG--DFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAV 298
+ + +GH+ DFR+ K+S++ S DG + W ++ ++ + G V
Sbjct: 1036 KCIF-LRGHQETVKDFRL-----LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQG-TV 1088
Query: 299 VNSLCSHPTRKHIMSACGNNVKLWT 323
++ SH K ++ K+W+
Sbjct: 1089 LSCDISHDATKFSSTSADKTAKIWS 1113
Score = 121 (47.7 bits), Expect = 6.4e-07, Sum P(2) = 6.4e-07
Identities = 41/162 (25%), Positives = 70/162 (43%)
Query: 54 HAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVI 113
H V A + D +IAS +DK++ +++ TG+ + + H +V C F+ D +
Sbjct: 614 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 673
Query: 114 SGSQDNTVMMWD------VKSRSHHP--IQCCLDSKDSQ---IFCGSSDGKIYKWQLVDS 162
+ S D V +W+ V + H + CC + S + GSSD + W L
Sbjct: 674 TCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQK 733
Query: 163 SQISTLIHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWTA 202
+T+ VN P K ++++C +KLW A
Sbjct: 734 ECRNTMFGHTNS--VNHCRFSPDDK-LLASCSADGTLKLWDA 772
Score = 75 (31.5 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 35/140 (25%), Positives = 58/140 (41%)
Query: 197 VKLWTA-----EEDY--GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGH 249
VK+W E+D+ Q ++ + D + S D+ +++ L E +GH
Sbjct: 1067 VKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGH 1126
Query: 250 KSGDFRIECCLDSKDSQIFC-GSSDGKIYKWQLVDSS--QISTLIHSVGKAV----VNSL 302
+G R C S DS + G +G+I W + + + + G A V L
Sbjct: 1127 -NGCVR--CSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDL 1183
Query: 303 CSHPTRKHIMSACGNNVKLW 322
C P K ++SA G +K W
Sbjct: 1184 CFSPDGKMLISA-GGYIKWW 1202
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 41/138 (29%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S A DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 147 (56.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 70/322 (21%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S ++D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 116 (45.9 bits), Expect = 0.00052, P = 0.00052
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSAARDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 181 (68.8 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLIASSSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 146 (56.5 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 48/202 (23%), Positives = 86/202 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNT 120
D + IAS ++D++V +W V T + REH V C+ + +S+ ++ + T
Sbjct: 242 PNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTILEATGSET 301
Query: 121 VMMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNS 179
KS P + GS D I W + + TL+ H V
Sbjct: 302 K-----KSGKPGPF----------LLSGSRDKTIKMWDVSIGMCLMTLVGHDNW---VRG 343
Query: 180 LCSHPTRKHIMSACGNN-VKLW 200
+ HP K+I+S + +++W
Sbjct: 344 VLVHPGGKYIVSCADDKTLRIW 365
Score = 142 (55.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 68/319 (21%), Positives = 130/319 (40%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVIVSASEDATIKVWDHETGDFERTLKGHTDSVQDISFDHTGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSR 129
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V K+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTF 230
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 187
+ H ++ ++D + SS+ + + +V + + + + VV + P
Sbjct: 231 TGHREWVRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELRE-HEHVVECISWAPESA 289
Query: 188 H--IMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEE 245
H I+ A G+ K +P F +L+ S D+ ++++D + G L
Sbjct: 290 HPTILEATGSETKK-------SGKP---GPF------LLSGSRDKTIKMWDVSIGMCLMT 333
Query: 246 YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCS 304
GH D + L + +D K + W + TL S + V SL
Sbjct: 334 LVGH---DNWVRGVLVHPGGKYIVSCADDKTLRIWDYKNKRCTKTL--SAHEHFVTSLDF 388
Query: 305 HPTRKHIMS-ACGNNVKLW 322
H T ++++ + VK+W
Sbjct: 389 HKTAPYVVTGSVDQTVKVW 407
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 50/103 (48%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSIGMCLMTLVGHDNWVRGVLVHPGGKYIVSCADDKTLRIWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ + H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>POMBASE|SPBC713.04c [details] [associations]
symbol:SPBC713.04c "U3 snoRNP-associated protein Utp1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IDA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0030515 "snoRNA binding" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC713.04c GO:GO:0005829
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 GO:GO:0030515 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR011047
SUPFAM:SSF50998 GO:GO:0006364 GO:GO:0005732 HOGENOM:HOG000160363
KO:K14558 OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148
PANTHER:PTHR19858 Pfam:PF04003 RefSeq:NP_595343.1
ProteinModelPortal:Q9C1X1 STRING:Q9C1X1 EnsemblFungi:SPBC713.04c.1
GeneID:2541182 KEGG:spo:SPBC713.04c OrthoDB:EOG4350F7
NextBio:20802294 Uniprot:Q9C1X1
Length = 854
Score = 186 (70.5 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 65/271 (23%), Positives = 122/271 (45%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C+ T A+ + F+ G+ + D ++ W+ R +T+ + A
Sbjct: 373 CIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAV 432
Query: 65 CDSSQIA-SGASDK-SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
S +I +G+ D + +W V TGQ + H V+ + FN S++ SGS D TV
Sbjct: 433 DPSGEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSGSLLASGSWDKTVR 492
Query: 123 MWDVKSRSH--HPIQCCLD------SKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVG 173
+WD+ SRS P+ D D + C +S DG++ W + + Q S LI G
Sbjct: 493 IWDIFSRSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTFWNVQEGKQTS-LID--G 549
Query: 174 KAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLR 233
+ ++ R+ ++ + TAE + C++ D C+L+ T + +
Sbjct: 550 RKDLSG-----GRRF------DDAR--TAENSSLNKTFTSICYSADGSCVLSAGTSKYVC 596
Query: 234 LFDKATGELLEEYKGHKSGDFR-IECCLDSK 263
L+D TG L+++++ K+ + ++ L+S+
Sbjct: 597 LYDIITGVLIKKFQLSKNESLQGVQEMLNSR 627
Score = 139 (54.0 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 50/213 (23%), Positives = 97/213 (45%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDK--KIKLWN-PYRNLLLKTYGGHAHEVN 59
+T + + Q I + N G + + GS K ++ +W + +LK H ++
Sbjct: 286 FTMLYQLSITQSNIDTLTVNSTGDW-IAIGSSKLGQLLVWEWQSESYVLKQQS-HYDALS 343
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
+ D +I +GA D + +W++ +G + + +H S V+ + F++ +V+ S S D
Sbjct: 344 TLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDG 403
Query: 120 TVMMWD-VKSRSHH----P--IQ--CCLDSKDSQIFC-GSSDG-KIYKWQLVDSSQISTL 168
+V WD ++ R+ P +Q C +I C GS D +I+ W + + TL
Sbjct: 404 SVRAWDLIRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETL 463
Query: 169 IHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
G V+SL + + + S + V++W
Sbjct: 464 AGHEGP--VSSLSFNSSGSLLASGSWDKTVRIW 494
>POMBASE|SPAC18B11.10 [details] [associations]
symbol:tup11 "transcriptional corepressor Tup11"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003714 "transcription corepressor activity" evidence=IGI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=TAS] [GO:0033554 "cellular response
to stress" evidence=IEP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045014 "negative regulation of transcription by glucose"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC18B11.10 GO:GO:0005829 GO:GO:0003714
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0033554 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0000122 GO:GO:0000790 GO:GO:0006342
GO:GO:0042393 GO:GO:0045014 EMBL:AB027768 PIR:S58306
RefSeq:NP_592873.1 ProteinModelPortal:Q09715 STRING:Q09715
EnsemblFungi:SPAC18B11.10.1 GeneID:2542299 KEGG:spo:SPAC18B11.10
HOGENOM:HOG000200558 KO:K06666 OMA:KPRENEN OrthoDB:EOG4KM2C2
NextBio:20803361 InterPro:IPR013890 Pfam:PF08581 ProDom:PD010558
Uniprot:Q09715
Length = 614
Score = 165 (63.1 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 42/152 (27%), Positives = 70/152 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R + F+ DG Y +T D++IKLW+ + + GH ++ + + I SG+
Sbjct: 363 VRTIAFSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSG 422
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS------R 129
D++ LW+V TGQ + + E + VT + + + + GS D + +W V
Sbjct: 423 DRTARLWDVETGQCILKL-EIENGVTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLE 481
Query: 130 SH-HPIQCCLDSKDSQIFC-GSSDGKIYKWQL 159
H + S DS I GS D I W+L
Sbjct: 482 GHKESVYSIAFSPDSSILLSGSLDKTIKVWEL 513
Score = 133 (51.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/139 (28%), Positives = 63/139 (45%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWN--PYRNLLLK----------TY 51
T V+ ++ + ++ ++ F+ D S L+ DK IK+W R++ L TY
Sbjct: 475 TLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATY 534
Query: 52 GGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV 111
GH V + DS SG+ D+S+ W++ TGQ + H + V V F+ D
Sbjct: 535 TGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISVCFSPDGRQ 594
Query: 112 VISGSQDNTVMMWDVKSRS 130
SGS D +W + S
Sbjct: 595 FASGSGDLRARIWSIDPAS 613
Score = 121 (47.7 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 34/118 (28%), Positives = 62/118 (52%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRN-LLLKTYGGHAHEV-NDATAACDSSQ---I 70
I ++ F+ +G + ++ D+ +LW+ +LK E+ N TA S I
Sbjct: 405 IYSLDFSHNGRFIVSGSGDRTARLWDVETGQCILKL------EIENGVTAIAISPNDQFI 458
Query: 71 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
A G+ D+ + +W V+ G V R H V + F+ DSS+++SGS D T+ +W++++
Sbjct: 459 AVGSLDQIIRVWSVS-GTLVERLEGHKESVYSIAFSPDSSILLSGSLDKTIKVWELQA 515
Score = 62 (26.9 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCG 270
++ + D + L+ S D ++ +D TG+ +GHK+ I C Q G
Sbjct: 541 VLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSV--ISVCFSPDGRQFASG 598
Query: 271 SSDGKIYKWQLVDSS 285
S D + W + +S
Sbjct: 599 SGDLRARIWSIDPAS 613
>FB|FBgn0021874 [details] [associations]
symbol:Nle "Notchless" species:7227 "Drosophila melanogaster"
[GO:0007219 "Notch signaling pathway" evidence=ISS;TAS] [GO:0005112
"Notch binding" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 GO:GO:0005634 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007219
GO:GO:0005112 GeneTree:ENSGT00690000102167 InterPro:IPR011047
SUPFAM:SSF50998 HSSP:P16649 PRINTS:PR00319 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 FlyBase:FBgn0021874 EMBL:AY089286
RefSeq:NP_477294.2 UniGene:Dm.13475 SMR:Q9VPR4 IntAct:Q9VPR4
MINT:MINT-291987 STRING:Q9VPR4 EnsemblMetazoa:FBtr0078075
GeneID:33234 KEGG:dme:Dmel_CG2863 UCSC:CG2863-RA CTD:33234
InParanoid:Q9VPR4 GenomeRNAi:33234 NextBio:782583 Uniprot:Q9VPR4
Length = 488
Score = 182 (69.1 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 35/101 (34%), Positives = 59/101 (58%)
Query: 29 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 88
++C D + LW +N ++ GH + VND + D IAS + DKSV LW + GQ
Sbjct: 349 VSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQ 408
Query: 89 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 129
+ +R H V V ++ DS +++SGS+D+T+ +W V+++
Sbjct: 409 YMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTK 449
Score = 158 (60.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/120 (27%), Positives = 56/120 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV+ + Q + V+++ D + DK ++LW + T+ GH V +
Sbjct: 367 CVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWS 426
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
DS I SG+ D ++ +W V T + + HA +V V + D S V SG +D + +W
Sbjct: 427 ADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSRVASGGKDKVIKLW 486
Score = 134 (52.2 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 61/268 (22%), Positives = 112/268 (41%)
Query: 30 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 89
+ D ++W+ L GH + V A + I + + D++V +W G
Sbjct: 226 SASGDGDCRIWDVKLGQCLMNIAGHTNAVT-AVRWGGAGLIYTSSKDRTVKMWRAADGIL 284
Query: 90 VRRWREHASKVTCVKFNEDSSV-------VISGSQDN-TVMMWDVKSRSHHPIQC-CLDS 140
R + HA V + + D + V S+ + ++ +++ + Q C D
Sbjct: 285 CRTFSGHAHWVNNIALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDE 344
Query: 141 KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNNVK 198
+S + C S D +Y W+ ++Q + G + VVN + P K I SA +V+
Sbjct: 345 VESLVSC-SDDNTLYLWR---NNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVR 400
Query: 199 LWTAEE-DY-----GQ-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS 251
LW A + Y G + + ++ D + I++ S D L+++ T +L +E GH
Sbjct: 401 LWRASDGQYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHAD 460
Query: 252 GDFRIECCLDSKDSQIFCGSSDGKIYKW 279
F ++ D S++ G D I W
Sbjct: 461 EVFGVDWAPDG--SRVASGGKDKVIKLW 486
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 33/129 (25%), Positives = 60/129 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C ++ A+ ++ F+ DG++ + D ++LW+ T GH V + A
Sbjct: 111 CTSSMPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWA 170
Query: 65 CDSSQIASGASDKSVILWEVTTGQ----PVRRWREHASKVTCVKFNEDSSV--VISGSQD 118
D ++ASG S+I+W+ TGQ P+ ++H + + ++ D + S S D
Sbjct: 171 PDGKRLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGD 230
Query: 119 NTVMMWDVK 127
+WDVK
Sbjct: 231 GDCRIWDVK 239
Score = 125 (49.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 49/231 (21%), Positives = 98/231 (42%)
Query: 69 QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW---- 124
++AS + D +W+V GQ + H + VT V++ + ++ + S+D TV MW
Sbjct: 223 KLASASGDGDCRIWDVKLGQCLMNIAGHTNAVTAVRWG-GAGLIYTSSKDRTVKMWRAAD 281
Query: 125 DVKSRS---H-HPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVN-- 178
+ R+ H H + S D + G + + S +S + ++ +
Sbjct: 282 GILCRTFSGHAHWVNNIALSTDYVL----RTGPFHPVKDRSKSHLSLSTEELQESALKRY 337
Query: 179 -SLCSHPTRKHIMSACGNNVKLWT------AEEDYGQEPIV-DACFTRDCQCILTCSTDE 230
++C + + N + LW E G + +V D ++ D + I + S D+
Sbjct: 338 QAVCPDEVESLVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDK 397
Query: 231 CLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQL 281
+RL+ + G+ + ++GH + + DS+ I GS D + W +
Sbjct: 398 SVRLWRASDGQYMATFRGHVQAVYTVAWSADSR--LIVSGSKDSTLKVWSV 446
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 49/212 (23%), Positives = 92/212 (43%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C+ I A+ AVR+ G T D+ +K+W +L +T+ GHAH VN+ +
Sbjct: 243 CLMNIAGHTNAVTAVRWGGAG-LIYTSSKDRTVKMWRAADGILCRTFSGHAHWVNNIALS 301
Query: 65 CDSSQIASG----ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT 120
D + +G D+S ++T + +E A K ++ ++S S DNT
Sbjct: 302 TDYV-LRTGPFHPVKDRSKSHLSLSTEE----LQESALKRYQAVCPDEVESLVSCSDDNT 356
Query: 121 VMMWD------VKSRSHHP--IQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHS 171
+ +W V+ + H + S D ++ +S D + W+ D ++T
Sbjct: 357 LYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGH 416
Query: 172 VGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 203
V +AV S +R + + + +K+W+ +
Sbjct: 417 V-QAVYTVAWSADSRLIVSGSKDSTLKVWSVQ 447
>UNIPROTKB|E2RSW2 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071013 OMA:KRQKRGK
GeneTree:ENSGT00530000063583 EMBL:AAEX03008598
Ensembl:ENSCAFT00000006230 NextBio:20850941 Uniprot:E2RSW2
Length = 663
Score = 184 (69.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 54/176 (30%), Positives = 88/176 (50%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y + L+T+ GH+ V D +Q S
Sbjct: 375 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 434
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 435 AYDRYLKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 492
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 493 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 548
Score = 133 (51.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 42/212 (19%), Positives = 89/212 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDAT 62
C++T A+R + FN G+ L+ D+ +KLW+ + + + V
Sbjct: 408 CLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNP 467
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++
Sbjct: 468 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 527
Query: 123 MWD---------VKSRSHHPIQCCLDSKDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSV 172
+W+ + S H + S + + + C S D +I + + +++
Sbjct: 528 VWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFK 587
Query: 173 GKAVVNSLCS---HPTRKHIMSACGNN-VKLW 200
G V C P +++S GN + +W
Sbjct: 588 GHMVAGYACQVDFSPDMSYVISGDGNGKLNIW 619
>FB|FBgn0023423 [details] [associations]
symbol:slmb "supernumerary limbs" species:7227 "Drosophila
melanogaster" [GO:0045879 "negative regulation of smoothened
signaling pathway" evidence=IMP] [GO:0030111 "regulation of Wnt
receptor signaling pathway" evidence=IMP;TAS] [GO:0008588 "release
of cytoplasmic sequestered NF-kappaB" evidence=IMP;TAS] [GO:0008589
"regulation of smoothened signaling pathway" evidence=TAS]
[GO:0000151 "ubiquitin ligase complex" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0030512
"negative regulation of transforming growth factor beta receptor
signaling pathway" evidence=NAS] [GO:0030178 "negative regulation
of Wnt receptor signaling pathway" evidence=IMP;NAS] [GO:0019005
"SCF ubiquitin ligase complex" evidence=NAS;TAS] [GO:0006508
"proteolysis" evidence=IMP] [GO:0045475 "locomotor rhythm"
evidence=IMP] [GO:0007623 "circadian rhythm" evidence=IMP;IPI]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0030708 "germarium-derived female
germ-line cyst encapsulation" evidence=IMP] [GO:0046843 "dorsal
appendage formation" evidence=IMP] [GO:0030720 "oocyte localization
involved in germarium-derived egg chamber formation" evidence=IMP]
[GO:0007088 "regulation of mitosis" evidence=IMP] [GO:0030727
"germarium-derived female germ-line cyst formation" evidence=IMP]
[GO:0045849 "negative regulation of nurse cell apoptotic process"
evidence=IMP] [GO:0030707 "ovarian follicle cell development"
evidence=IMP] [GO:0007293 "germarium-derived egg chamber formation"
evidence=IMP] [GO:0030713 "ovarian follicle cell stalk formation"
evidence=IMP] [GO:0007304 "chorion-containing eggshell formation"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046599 "regulation of centriole replication" evidence=IDA]
[GO:0060253 "negative regulation of glial cell proliferation"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 InterPro:IPR021977
Pfam:PF00400 Pfam:PF12125 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00256 SMART:SM00320 SMART:SM01028 GO:GO:0007088
GO:GO:0008355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030162 GO:GO:0006508 SUPFAM:SSF81383 GO:GO:0007298
GO:GO:0045475 GO:GO:0019005 GO:GO:0004842 GO:GO:0030178
GO:GO:0046843 GO:GO:0030720 GO:GO:0030713 GO:GO:0030512
GO:GO:0030727 GO:GO:0030708 GO:GO:0008588 GO:GO:0045879
GO:GO:0046599 HSSP:Q9Y297 GO:GO:0060253 EMBL:AF032878
ProteinModelPortal:O44382 SMR:O44382 IntAct:O44382 STRING:O44382
PaxDb:O44382 PRIDE:O44382 FlyBase:FBgn0023423 HOGENOM:HOG000102803
InParanoid:O44382 OrthoDB:EOG4S7H55 ArrayExpress:O44382 Bgee:O44382
GO:GO:0045849 Uniprot:O44382
Length = 510
Score = 182 (69.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 44/156 (28%), Positives = 74/156 (47%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWN---PYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
A+ +RFN +TC D+ I +W+ P L + GH VN D I
Sbjct: 292 AVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAAVN--VVDFDEKYIV 347
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
S + D+++ +W +T + VR H + C+++ + +V+SGS DN++ +WD++
Sbjct: 348 SASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRD--RLVVSGSSDNSIRLWDIECGAC 405
Query: 129 ----RSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLV 160
H + C+ +I G+ DGKI W LV
Sbjct: 406 LRVLEGHEELVRCIRFDTKRIVSGAYDGKIKVWDLV 441
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 66/265 (24%), Positives = 116/265 (43%)
Query: 95 EHASKVTCVKFNEDSSVVISGSQDNTVMMWD------VKS-RSHHPIQCCLDSKDSQIFC 147
E++ V C+++ D ++SG +DNT+ +WD VK+ H CL D I
Sbjct: 208 ENSKGVYCLQY--DDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQYDDKVIIS 265
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLW--TAE 203
GSSD + W + ++TLIH +AV++ ++ +M C + + +W T+
Sbjct: 266 GSSDSTVRVWDVNTGEMVNTLIHHC-EAVLHLRFNNG----MMVTCSKDRSIAVWDMTSP 320
Query: 204 EDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRI 256
+ G V+ D + I++ S D ++++ +T E + GHK G
Sbjct: 321 SEITLRRVLVGHRAAVNVV-DFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGI--- 376
Query: 257 ECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACG 316
CL +D + GSSD I W + + + L G + T++ + A
Sbjct: 377 -ACLQYRDRLVVSGSSDNSIRLWDIECGACLRVL---EGHEELVRCIRFDTKRIVSGAYD 432
Query: 317 NNVKLW--TAEEDYGQAGLSSLYLN 339
+K+W A D +A ++L LN
Sbjct: 433 GKIKVWDLVAALD-PRAASNTLCLN 456
Score = 152 (58.6 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 62/240 (25%), Positives = 101/240 (42%)
Query: 22 NVDGSYCL-------TCG-SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
N G YCL G D IK+W+ +KT GH V D I SG
Sbjct: 209 NSKGVYCLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVIISG 266
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--- 130
+SD +V +W+V TG+ V H V ++FN + ++++ S+D ++ +WD+ S S
Sbjct: 267 SSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMTSPSEIT 324
Query: 131 -------HHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCS 182
H +D + I S D I W + TL H G A +
Sbjct: 325 LRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ---- 380
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ R + + N+++LW E G E +V C D + I++ + D ++++D
Sbjct: 381 YRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEELV-RCIRFDTKRIVSGAYDGKIKVWD 439
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 178 (67.7 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 79 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 138
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 139 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 198
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 199 ATKECKAELREHEHVVEC 216
Score = 150 (57.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 46 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 105
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 106 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 160
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 161 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 209
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 210 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 265
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 266 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 320
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 321 LDFHKTAPYVVTGSVDQTVKVW 342
Score = 139 (54.0 bits), Expect = 9.8e-07, P = 9.8e-07
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 117 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 176
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 177 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 234
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 235 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 290
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 291 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 131 (51.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 243 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 302
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 303 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 345
Score = 115 (45.5 bits), Expect = 0.00050, P = 0.00050
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 42 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 101
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 102 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 159
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 160 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 216
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 183 (69.5 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 54/202 (26%), Positives = 92/202 (45%)
Query: 12 KQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
+Q IR + F+ +C DK IK+W+ R GH +V + S I
Sbjct: 208 EQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIV 267
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--- 128
SG D ++ +W+ + Q + H S V+ V++N++ + ++S S D + ++D+++
Sbjct: 268 SGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWNQNGNWIVSASSDQLLKVFDIRTMKE 327
Query: 129 ----RSH--HPIQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
+ H L +F G DGKI W +V + + IHS A V SL
Sbjct: 328 MQTFKGHGKEVTALALHPYHEDLFVSGDKDGKILYW-IVGNPEPQAEIHSAHDADVWSLS 386
Query: 182 SHPTRKHIMSACGNN--VKLWT 201
HP HI+++ N+ K W+
Sbjct: 387 WHPIG-HILASGSNDHTTKFWS 407
Score = 171 (65.3 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 70/289 (24%), Positives = 127/289 (43%)
Query: 56 HEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 115
+ +N + + ++ +G+S LW T + H S V + ++ + ++SG
Sbjct: 126 YPINCVSWTPEGRRLVTGSSSGEFTLWNGLTFNFETILQAHDSAVRSIIWSHNEDWMVSG 185
Query: 116 SQDNTVMMW-----DVKS-RSHHPIQCC-LDSKDSQIFCGS-SDGKIYK-WQLVDSSQIS 166
+ W +VK ++H + L + + S +D KI K W ++ +
Sbjct: 186 DDSGNIKYWQPNMNNVKIFKAHEQSKIRGLSFSPTDLKLASCADDKIIKIWDFARCTEDN 245
Query: 167 TLI-HSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEED------YGQEPIVDAC-FT 217
L+ H V + HP + I+S NN+K+W A+ +G + V +
Sbjct: 246 QLVGHGWD---VKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKSTVSKVEWN 302
Query: 218 RDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSDGKI 276
++ I++ S+D+ L++FD T + ++ +KGH G L +F G DGKI
Sbjct: 303 QNGNWIVSASSDQLLKVFDIRTMKEMQTFKGH--GKEVTALALHPYHEDLFVSGDKDGKI 360
Query: 277 YKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN--VKLWT 323
W +V + + IHS A V SL HP HI+++ N+ K W+
Sbjct: 361 LYW-IVGNPEPQAEIHSAHDADVWSLSWHPIG-HILASGSNDHTTKFWS 407
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 28/121 (23%), Positives = 58/121 (47%)
Query: 9 IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAH-EVNDATAACDS 67
+ A+R++ ++ + + ++ IK W P N + K + H ++ + +
Sbjct: 163 LQAHDSAVRSIIWSHNEDWMVSGDDSGNIKYWQPNMNNV-KIFKAHEQSKIRGLSFSPTD 221
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
++AS A DK + +W+ + H V CV ++ S+++SG +DN + +WD K
Sbjct: 222 LKLASCADDKIIKIWDFARCTEDNQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAK 281
Query: 128 S 128
S
Sbjct: 282 S 282
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 181 (68.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 61/268 (22%), Positives = 120/268 (44%)
Query: 25 GSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
G Y L GS D +++WN LL T GH + + I S + DK++ +W+
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSSSYDKTIRIWD 296
Query: 84 VTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM----MWDVKSRSHHPIQCCLD 139
G+ + + HA++V + + + V+ SG+ D+T D + ++ + CL
Sbjct: 297 AKDGKCLHILKGHAARVNHLSLSTEH-VLRSGAYDHTDFKPKSFSDERRKAKERYEACLK 355
Query: 140 SKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVK 198
++ S D ++ W S++ T +H K VVN P + I +A ++V+
Sbjct: 356 QSGERLVSASDDLQLILWDPQKSTKPITKMHGHQK-VVNHASFSPDGRCIATASFDSSVR 414
Query: 199 LWTAEEDY------GQEPIVDAC-FTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKS 251
LW + G V C ++ D + +++ S D L+++D + ++ + GH+
Sbjct: 415 LWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPGHED 474
Query: 252 GDFRIECCLDSKDSQIFCGSSDGKIYKW 279
F ++ D + ++ G +D + W
Sbjct: 475 QVFAVDWSPDGQ--RVASGGADKAVRIW 500
Score = 164 (62.8 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 85/339 (25%), Positives = 137/339 (40%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
C +++ G I + +F+ S L GS D +LW+ + T GH + V+
Sbjct: 126 CTASMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAW 185
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVR-RWREHASKVT--C---VKFNEDSS--VVISG 115
A D+S IA+G+ D ++ W+ G P+ R H + C + DS ++ SG
Sbjct: 186 APDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYLLASG 245
Query: 116 SQDNTVMMWDVKSR------SHH--PIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQIST 167
S+DNTV +W+VK R S H PI C + I+ S D I W D +
Sbjct: 246 SKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGGQNWIYSSSYDKTIRIWDAKDGKCLHI 305
Query: 168 LIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT---AEEDYGQEPIVDACFTRDCQCIL 224
L + VN L S T + S ++ ++E + +AC + + ++
Sbjct: 306 LKGHAAR--VNHL-SLSTEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLV 362
Query: 225 TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQ-IFCGSSDGKIYKWQLVD 283
+ S D L L+D K H + S D + I S D + W
Sbjct: 363 SASDDLQLILWDPQKSTK-PITKMHGHQKV-VNHASFSPDGRCIATASFDSSVRLWDGKT 420
Query: 284 SSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLW 322
++TL V AV S +R + S+ +K+W
Sbjct: 421 GKFLATLRGHVA-AVYQCAWSTDSRLLVSSSQDTTLKVW 458
Score = 123 (48.4 bits), Expect = 0.00012, P = 0.00012
Identities = 29/112 (25%), Positives = 47/112 (41%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
Q + F+ DG T D ++LW+ L T GH V + DS + S
Sbjct: 389 QKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVS 448
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ D ++ +W+V + + H +V V ++ D V SG D V +W
Sbjct: 449 SSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 105 (42.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 26/78 (33%), Positives = 42/78 (53%)
Query: 206 YGQEPIVD-ACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKD 264
+G + +V+ A F+ D +CI T S D +RL+D TG+ L +GH + ++ C S D
Sbjct: 386 HGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRGHVAAVYQ---CAWSTD 442
Query: 265 SQIFCGSSDGKIYK-WQL 281
S++ SS K W +
Sbjct: 443 SRLLVSSSQDTTLKVWDV 460
Score = 100 (40.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 32/132 (24%), Positives = 54/132 (40%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLL-KTYGGHAHEV---- 58
T + T+ + V + D S T D I+ W+P + + H +
Sbjct: 168 TPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALC 227
Query: 59 -NDATAACDSSQ--IASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 115
A DS +ASG+ D +V +W V + H + +TCV++ + + S
Sbjct: 228 WQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIYSS 286
Query: 116 SQDNTVMMWDVK 127
S D T+ +WD K
Sbjct: 287 SYDKTIRIWDAK 298
>POMBASE|SPAC4D7.05 [details] [associations]
symbol:sum1 "translation initiation factor eIF3i"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006413 "translational
initiation" evidence=IMP] [GO:0016282 "eukaryotic 43S preinitiation
complex" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0065007 "biological regulation" evidence=NAS]
[GO:0071470 "cellular response to osmotic stress" evidence=IMP]
[GO:0071540 "eukaryotic translation initiation factor 3 complex,
eIF3e" evidence=IDA] [GO:0071541 "eukaryotic translation initiation
factor 3 complex, eIF3m" evidence=IDA] [GO:0003743 "translation
initiation factor activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC4D7.05 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0071470 GO:GO:0003743 GO:GO:0034399 GO:GO:0065007
GO:GO:0002183 GO:GO:0016282 GO:GO:0071540 GO:GO:0071541
HOGENOM:HOG000231322 KO:K03246 HAMAP:MF_03008 OMA:ATVAGWS
OrthoDB:EOG44QX8Q EMBL:Y09529 EMBL:D89187 PIR:T38796 PIR:T42745
PIR:T46558 RefSeq:NP_594958.1 ProteinModelPortal:P79083
STRING:P79083 PRIDE:P79083 EnsemblFungi:SPAC4D7.05.1 GeneID:2543537
KEGG:spo:SPAC4D7.05 NextBio:20804546 Uniprot:P79083
Length = 328
Score = 158 (60.7 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 31/100 (31%), Positives = 56/100 (56%)
Query: 19 VRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKS 78
+++N DG +C DK I +W + L TY GH + S+ + SGA+D +
Sbjct: 16 IKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLMVSGAADNT 75
Query: 79 VILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 118
+ LW+V TG+ + +W E + V V+FNED + +++ +++
Sbjct: 76 MRLWDVKTGKQLYKW-EFPTAVKRVEFNEDDTRILAVTEE 114
Score = 109 (43.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 21/76 (27%), Positives = 38/76 (50%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
GH + D + S A DK + +W G+ + + H + N+ S+++
Sbjct: 8 GHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSSTLM 67
Query: 113 ISGSQDNTVMMWDVKS 128
+SG+ DNT+ +WDVK+
Sbjct: 68 VSGAADNTMRLWDVKT 83
Score = 58 (25.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 145 IFCGSSDGKIYKWQLVDSSQI-STLIHSVGKAVVNSLCSHPTRKHIMSAC 193
+F G DG + ++ + + S +H+ G + + L +P R + +++C
Sbjct: 162 LFTGHEDGSVSRYDAITGEFVESKQVHNSGSTITD-LQFYPDRTYFITSC 210
Score = 58 (25.5 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 11/50 (22%), Positives = 26/50 (52%)
Query: 267 IFCGSSDGKIYKWQLVDSSQI-STLIHSVGKAVVNSLCSHPTRKHIMSAC 315
+F G DG + ++ + + S +H+ G + + L +P R + +++C
Sbjct: 162 LFTGHEDGSVSRYDAITGEFVESKQVHNSGSTITD-LQFYPDRTYFITSC 210
Score = 46 (21.3 bits), Expect = 6.2e-10, Sum P(2) = 6.2e-10
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 223 ILTCSTDECLRLFDKATGELLEEYKGHKSG 252
+ T D + +D TGE +E + H SG
Sbjct: 162 LFTGHEDGSVSRYDAITGEFVESKQVHNSG 191
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 180 (68.4 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 55/250 (22%), Positives = 100/250 (40%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R + + T D+ IK+W+ L + GH V + + S
Sbjct: 173 GWVRCIAVEPGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSC 232
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH-H 132
D+ V W++ + +R + H S V + + V+ + +D+T +WD++++++ H
Sbjct: 233 GEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANVH 292
Query: 133 PI--------QCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHP 184
+ + + QI GS D + W L + TL + K V S+ HP
Sbjct: 293 TLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNH--KKSVRSIVLHP 350
Query: 185 TRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLF-DK 237
+ SA +N+K W E G IV+ C + + +L D F D
Sbjct: 351 SLYMFASASPDNIKQWRCPEGKFVQNISGHTSIVN-CMAANSEGVLVSGGDNGTMFFWDW 409
Query: 238 ATGELLEEYK 247
TG + ++
Sbjct: 410 RTGYNFQRFQ 419
Score = 160 (61.4 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 51/246 (20%), Positives = 99/246 (40%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R V + Y +CG D+++K W+ N +++ Y GH V +A+
Sbjct: 217 VRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLSAVYSLALHPTIDVLATSGR 276
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KS---R 129
D + +W++ T V H + V V + +I+GS D+TV +WD+ KS
Sbjct: 277 DSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTL 336
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 187
++H ++ + +F +S I +W+ + + + S ++VN C +
Sbjct: 337 TNHKKSVRSIVLHPSLYMFASASPDNIKQWRCPEGKFVQNI--SGHTSIVN--CMAANSE 392
Query: 188 HIMSACGNNVKL--WTAEEDYG----QEPIVDACFTRDCQCILTCSTDECLRLFDKATGE 241
++ + G+N + W Y Q P+ + C RL +
Sbjct: 393 GVLVSGGDNGTMFFWDWRTGYNFQRFQAPVQPGSMDSEAGIFAMCFDQSGSRLITAEADK 452
Query: 242 LLEEYK 247
++ YK
Sbjct: 453 TIKVYK 458
>WB|WBGene00003047 [details] [associations]
symbol:lis-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040025
"vulval development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0035046 "pronuclear migration" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007100 "mitotic
centrosome separation" evidence=IMP] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] [GO:0051026 "chiasma
assembly" evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0051932 "synaptic transmission, GABAergic"
evidence=IGI;IMP] [GO:0048489 "synaptic vesicle transport"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005938
"cell cortex" evidence=IDA] [GO:0005818 "aster" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005874 "microtubule"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0009792 GO:GO:0000132 GO:GO:0035046 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0000776 GO:GO:0051301
GO:GO:0007052 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0048477
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0048489
GO:GO:0005874 GO:GO:0040025 GO:GO:0043652 GO:GO:0005818
GO:GO:0007018 GO:GO:0000777 GO:GO:0051026 GO:GO:0051932 EMBL:Z81113
GO:GO:0007100 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
KO:K01062 OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AF164430 PIR:T24399
RefSeq:NP_499755.1 UniGene:Cel.19492 ProteinModelPortal:Q9NDC9
SMR:Q9NDC9 IntAct:Q9NDC9 STRING:Q9NDC9 PaxDb:Q9NDC9
EnsemblMetazoa:T03F6.5 GeneID:176758 KEGG:cel:CELE_T03F6.5
UCSC:T03F6.5 CTD:36791 WormBase:T03F6.5 InParanoid:Q9NDC9
NextBio:893884 Uniprot:Q9NDC9
Length = 404
Score = 159 (61.0 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 39/139 (28%), Positives = 66/139 (47%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAAC 65
+T+ A+ + + G ++C SD IKLW+ + LK+ GH H V+ T
Sbjct: 142 RTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLP 201
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
+ S + D ++ W+++TG V +R H V ++ + D ++ S S D TV +W
Sbjct: 202 TGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWS 261
Query: 126 --VKS-----RSH-HPIQC 136
KS R H H ++C
Sbjct: 262 FATKSAKLVLRDHEHAVEC 280
Score = 152 (58.6 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 40/144 (27%), Positives = 64/144 (44%)
Query: 30 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV-TTGQ 88
+C D IK+W+ L +T GH VND Q+ S +SD S+ LW+ T
Sbjct: 123 SCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQTYD 182
Query: 89 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHP-IQCCLDS 140
++ + H V+ V F V+S S+D+T+ WD+ + R H+ ++ S
Sbjct: 183 CLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIRIS 242
Query: 141 KDSQIFCGSS-DGKIYKWQLVDSS 163
D +F +S D + W S
Sbjct: 243 NDGTLFASASLDQTVTVWSFATKS 266
Score = 125 (49.1 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 32/141 (22%), Positives = 63/141 (44%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
Y C++++ + + +V F G + L+ D IK W+ + T+ GH V
Sbjct: 181 YDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMIR 240
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS------------ 110
+ D + AS + D++V +W T R+H V CV++ D++
Sbjct: 241 ISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGN 300
Query: 111 ---VVISGSQDNTVMMWDVKS 128
++ SGS+D ++ W++ +
Sbjct: 301 STHILFSGSRDRSIKAWNINT 321
Score = 60 (26.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 145 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 200
+F GS D I W + + TL+ + V L HP K+++S + +++W
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLL--AHENWVRGLAFHPKGKYLISVADDKTLRVW 359
Score = 60 (26.2 bits), Expect = 4.7e-11, Sum P(2) = 4.7e-11
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 267 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLW 322
+F GS D I W + + TL+ + V L HP K+++S + +++W
Sbjct: 305 LFSGSRDRSIKAWNINTGDVLFTLL--AHENWVRGLAFHPKGKYLISVADDKTLRVW 359
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 184 (69.8 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 60/289 (20%), Positives = 126/289 (43%)
Query: 18 AVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDK 77
AV F+ G + + SD +++W+ + ++TY GH ++ + D + SG D
Sbjct: 105 AVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDN 164
Query: 78 SVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS----RSHHP 133
V +W++T G+ + ++ H + + F+ ++ +GS D TV WD+++ + P
Sbjct: 165 VVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRP 224
Query: 134 ----IQCCLDSKDSQ-IFCGSSDG-KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 187
++ D Q +FCG DG K+Y W+ V I +G + + C + +
Sbjct: 225 EATGVRAIAFHPDGQTLFCGLDDGLKVYSWEPV----ICRDGVDMGWSTLGDFCINEGKF 280
Query: 188 HIMSACGNNVKLWTAE----EDYGQ-EPIVDACFTRDCQCILTCSTDECLRLFDKATGEL 242
S N+V +W ++ E YG + C + + D+ R+ G +
Sbjct: 281 IGCSYYRNSVGIWVSDISELEPYGAVSEDKNECMVKRFSVL----NDQSERMGSGPRGSV 336
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI 291
+Y+ + + + DS + + G + ++S +++T++
Sbjct: 337 SPDYETREIKNIYV----DSTGGNLNVAQNPGSLKATLPLESGKVATMV 381
Score = 154 (59.3 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/198 (22%), Positives = 89/198 (44%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ +V FN + L S IKLW+ + +++ + GH + +ASG+S
Sbjct: 61 VDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-RSHHPI 134
D ++ +W+ ++ ++ H ++ ++F+ D V+SG DN V +WD+ + + H
Sbjct: 121 DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 180
Query: 135 QC------CLDSKDSQIFC--GSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPT 185
+C LD + GS+D + W L I T + G V ++ HP
Sbjct: 181 KCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGTTRPEATG---VRAIAFHPD 237
Query: 186 RKHIMSACGNNVKLWTAE 203
+ + + +K+++ E
Sbjct: 238 GQTLFCGLDDGLKVYSWE 255
Score = 152 (58.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 78/313 (24%), Positives = 132/313 (42%)
Query: 44 RNLLLKTYGGHAHEVNDATAACDSSQIA-SGASDKSVILWEV-TTGQPVRRWREHASKVT 101
R L+ + H+ VN + +S++ +G D V LW + T P+ H S V
Sbjct: 4 RGYKLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCG-HTSPVD 62
Query: 102 CVKFNEDSSVVISGSQDNTVMMWD------VKSRSHHPIQC-CLDSKDSQIFC--GSSDG 152
V FN + +V++G+ + +WD V++ + H C ++ F GSSD
Sbjct: 63 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 122
Query: 153 KIYKWQLVDSSQISTLI-HSVGKAVVNSLCSHPTRKHIMSA-CGNNVKLW--TA-----E 203
+ W I T H+ G ++++ P + ++S N VK+W TA E
Sbjct: 123 NLRVWDTRKKGCIQTYKGHTRG---ISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHE 179
Query: 204 EDYGQEPIVDACFTRDCQCIL-TCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDS 262
+ PI F + +L T S D ++ +D T EL+ + +G +
Sbjct: 180 FKCHEGPIRSLDF-HPLEFLLATGSADRTVKFWDLETFELIGTTRPEATG---VRAIAFH 235
Query: 263 KDSQ-IFCGSSDG-KIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVK 320
D Q +FCG DG K+Y W+ V I +G + + C + + S N+V
Sbjct: 236 PDGQTLFCGLDDGLKVYSWEPV----ICRDGVDMGWSTLGDFCINEGKFIGCSYYRNSVG 291
Query: 321 LWTAE----EDYG 329
+W ++ E YG
Sbjct: 292 IWVSDISELEPYG 304
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 45/187 (24%), Positives = 75/187 (40%)
Query: 29 LTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQ 88
LT G D K+ LW+ + + GH V+ + + +GAS + LW++ +
Sbjct: 32 LTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESK 91
Query: 89 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-------H-HPIQCCLDS 140
VR + H S + V+F+ + SGS D + +WD + + H I S
Sbjct: 92 MVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFS 151
Query: 141 KDSQ-IFCGSSDGKIYKWQLVDSSQISTLIHSVG--KAVVNSLCSHPTRKHIMSACGNN- 196
D + + G D + W L L+H + + SL HP + + +
Sbjct: 152 PDGRWVVSGGLDNVVKVWDLTAGK----LLHEFKCHEGPIRSLDFHPLEFLLATGSADRT 207
Query: 197 VKLWTAE 203
VK W E
Sbjct: 208 VKFWDLE 214
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 29/122 (23%), Positives = 55/122 (45%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
C+QT I + F+ DG + ++ G D +K+W+ LL + H +
Sbjct: 134 CIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFH 193
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNT-VMM 123
+A+G++D++V W++ T + + R A+ V + F+ D + G D V
Sbjct: 194 PLEFLLATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCGLDDGLKVYS 253
Query: 124 WD 125
W+
Sbjct: 254 WE 255
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 178 (67.7 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
Score = 115 (45.5 bits), Expect = 0.00068, P = 0.00068
Identities = 49/180 (27%), Positives = 78/180 (43%)
Query: 96 HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQ-CCLDSKDSQIF 146
H S VT V F+ SV++S S+D T+ +WD ++ + H +Q D +
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 147 CGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEED 205
S+D I W I T+ H V +S+ P HI+SA + +K+W +
Sbjct: 167 SCSADMTIKLWDFQGFECIRTM-HGHDHNV-SSVAIMPNGDHIVSASRDKTIKMWEVQTG 224
Query: 206 Y------GQEPIVDACF-TRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIEC 258
Y G V +D I +CS D+ +R++ AT E E + H + +EC
Sbjct: 225 YCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREH---EHVVEC 281
>UNIPROTKB|Q5ZL33 [details] [associations]
symbol:STRAP "Serine-threonine kinase receptor-associated
protein" species:9031 "Gallus gallus" [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030512 "negative regulation of transforming
growth factor beta receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005739 GO:GO:0005886 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030054
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0005102 GO:GO:0005681 GO:GO:0000122 GO:GO:0030512 HSSP:P63005
GeneTree:ENSGT00630000089849 CTD:11171 HOGENOM:HOG000174258
HOVERGEN:HBG055228 KO:K13137 OrthoDB:EOG4CRM0M EMBL:AJ719901
IPI:IPI00577361 RefSeq:NP_001006247.2 UniGene:Gga.44357
ProteinModelPortal:Q5ZL33 STRING:Q5ZL33 PRIDE:Q5ZL33
Ensembl:ENSGALT00000021374 GeneID:418175 KEGG:gga:418175
InParanoid:Q5ZL33 NextBio:20821378 Uniprot:Q5ZL33
Length = 350
Score = 176 (67.0 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 65/247 (26%), Positives = 111/247 (44%)
Query: 50 TYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDS 109
T+ GH V AT D+++ A+ A+D + +W+ +G + H V V F +DS
Sbjct: 54 TFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELITLA-HKHIVKSVDFTQDS 112
Query: 110 SVVISGSQDNTVMMWDVKSRSHHP---------IQCCLDSKDSQIFCGSSDGKIYKWQLV 160
+ +++G QD + ++D+ P I+ L S D + + D + W
Sbjct: 113 NYLLTGGQDKLLRIYDLSKPEAEPDVVSGHTSGIKKALWSSDDKQILSADDKTVRLWDRS 172
Query: 161 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE--EDYG--QEP--IVDA 214
+++ L +V +V +S+ P + ++ G + +AE E + P I A
Sbjct: 173 TMTEVKAL--NVAMSV-SSMEYVPEGQILVITYGKTIAFHSAETLEQIKSFEAPATINSA 229
Query: 215 CFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC-GSSD 273
+ +C++ D L +D TGE LE YKGH G I C S D +++ GS D
Sbjct: 230 SLHPEKECLVAGGEDFKLYKYDYNTGEELESYKGH-FGP--IHCVRFSPDGELYASGSED 286
Query: 274 GKIYKWQ 280
G + WQ
Sbjct: 287 GTLRLWQ 293
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 58/245 (23%), Positives = 100/245 (40%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+GA+ N D + T +D K+W+ L T H H V DS+ + +
Sbjct: 59 KGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELITLA-HKHIVKSVDFTQDSNYLLT 117
Query: 73 GASDKSVILWEVTTGQPVRRWRE-HASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
G DK + +++++ + H S + ++ D ++S + D TV +WD + +
Sbjct: 118 GGQDKLLRIYDLSKPEAEPDVVSGHTSGIKKALWSSDDKQILS-ADDKTVRLWDRSTMTE 176
Query: 132 HPIQCCLDSKDSQIFCGSSDGKI----Y-KWQLVDSSQISTLIHSV-GKAVVNSLCSHPT 185
S S + +G+I Y K S++ I S A +NS HP
Sbjct: 177 VKALNVAMSVSSMEYV--PEGQILVITYGKTIAFHSAETLEQIKSFEAPATINSASLHP- 233
Query: 186 RKHIMSACGNNVKLWTAEEDYGQE---------PIVDACFTRDCQCILTCSTDECLRLFD 236
K + A G + KL+ + + G+E PI F+ D + + S D LRL+
Sbjct: 234 EKECLVAGGEDFKLYKYDYNTGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
Query: 237 KATGE 241
G+
Sbjct: 294 TTVGK 298
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 176 (67.0 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 48/200 (24%), Positives = 95/200 (47%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG---GHAHEVNDATAACDSSQI 70
G + AVRF+ + + D+ I LWN Y + YG GH + D + DS I
Sbjct: 67 GEVFAVRFDPTAQHIASGSMDRSILLWNTYGQC--ENYGILSGHKGAILDLQWSRDSKTI 124
Query: 71 ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNE-DSSVVISGSQDNTVMMWDVKSR 129
S ++D ++ W++ +GQ +RR+ H + V+ ++ +++S S D T+ +WD + +
Sbjct: 125 FSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQK 184
Query: 130 -------SHHPIQCCLDSK-DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLC 181
+ PI S+ +++F G D I+ W + + + ++ + + SL
Sbjct: 185 EAIDYLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAIVYSMAGHMD--TITSLE 242
Query: 182 SHPTRKHIMS-ACGNNVKLW 200
P + ++S + + V+ W
Sbjct: 243 VSPDSQTLLSNSFDSTVRTW 262
Score = 114 (45.2 bits), Expect = 0.00070, P = 0.00070
Identities = 34/157 (21%), Positives = 68/157 (43%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+GAI ++++ D + +D + W+ ++ Y GH +N + ++
Sbjct: 109 KGAILDLQWSRDSKTIFSASADMTLASWDIESGQRIRRYIGHEEVINSVEISKRGQEMLV 168
Query: 73 GASDKSVI-LWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS- 130
ASD + +W+ + + + E +T V +E + V SG DN + +WD++ ++
Sbjct: 169 SASDDGTMGIWDPRQKEAID-YLETELPITAVAQSEAGNEVFSGGIDNAIHVWDIRKKAI 227
Query: 131 ------HHPIQCCLD-SKDSQIFCGSS-DGKIYKWQL 159
H L+ S DSQ +S D + W +
Sbjct: 228 VYSMAGHMDTITSLEVSPDSQTLLSNSFDSTVRTWDI 264
>TAIR|locus:2157762 [details] [associations]
symbol:AT5G50230 "AT5G50230" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0007275 "multicellular
organismal development" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:BT011244 EMBL:BT020329 IPI:IPI00518229
RefSeq:NP_199834.2 UniGene:At.29744 ProteinModelPortal:Q6NNP0
SMR:Q6NNP0 PRIDE:Q6NNP0 EnsemblPlants:AT5G50230.1 GeneID:835088
KEGG:ath:AT5G50230 TAIR:At5g50230 InParanoid:Q6NNP0
PhylomeDB:Q6NNP0 ProtClustDB:CLSN2681670 Genevestigator:Q6NNP0
Uniprot:Q6NNP0
Length = 509
Score = 179 (68.1 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 48/204 (23%), Positives = 89/204 (43%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
TC I +G ++ F + T G D+ +K+W+ L+K+ G + D
Sbjct: 216 TCANRIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAV 275
Query: 64 ACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV-VISGSQDNTVM 122
D+ + + S ++ +W+V++G+ H KV V ++ SS V+S + D T+
Sbjct: 276 THDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIK 335
Query: 123 MWDV-KSRSHHPI----QC---CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVG 173
+WD+ K + + C CL +F G DG + W + +S + HS
Sbjct: 336 LWDLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHS-- 393
Query: 174 KAVVNSLCSHPTRKHIMSACGNNV 197
+ V S+ I+++ +NV
Sbjct: 394 -SAVTSVSLSRNGNRILTSGRDNV 416
Score = 129 (50.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 49/180 (27%), Positives = 77/180 (42%)
Query: 92 RWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS-----HHPIQCCLD---SKDS 143
R H + F +S + +G QD V MWD S + + + LD + D+
Sbjct: 220 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDN 279
Query: 144 Q-IFCGSSDGKIYKWQLVDSSQIS-TLIHSVGKAVVNSLCSHPTRKHIMSAC-GNNVKLW 200
+ + +S ++ W V S ++ TL K + +R H++SA +KLW
Sbjct: 280 KSVIAATSSNNLFVWD-VSSGRVRHTLTGHTDKVCAVDVSKFSSR-HVVSAAYDRTIKLW 337
Query: 201 TAEEDYGQEPIVDACFTRDCQCI------LTCST---DECLRLFDKATGELLEEYKGHKS 251
+ Y ++ FT +C I LT + D LRL+D TG+LL E GH S
Sbjct: 338 DLHKGYCTNTVL---FTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSS 394
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 34/155 (21%), Positives = 71/155 (45%)
Query: 27 YCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT 86
+ ++ D+ IKLW+ ++ T N + D + SG D ++ LW++ T
Sbjct: 324 HVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQT 382
Query: 87 GQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS--------RSHHPI---- 134
G+ + H+S VT V + + + +++ +DN ++D ++ S + +
Sbjct: 383 GKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNW 442
Query: 135 -QCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTL 168
+ C+ D + GS+DG ++ W L + +S L
Sbjct: 443 SRSCISPDDDYVAAGSADGSVHVWSLSKGNIVSIL 477
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 179 (68.1 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 57/244 (23%), Positives = 102/244 (41%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R V + Y +CG DK++K W+ N +++ Y GH V + + +
Sbjct: 248 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 307
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSR--- 129
D + +W+V T V H + V V+ +I+GS D T+ +WD+ K+R
Sbjct: 308 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 367
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 187
++H ++ + F S I +W+ D S I L S A++N+L +
Sbjct: 368 TNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNL--SGHNAIINTLTVNSDGV 425
Query: 188 HIMSACGNNVKLWTAEEDYGQEPIVDACF--TRDCQC-ILTCSTDEC-LRLFDKATGELL 243
+ A + LW Y + + A + D + I C+ D+ RL + +
Sbjct: 426 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI 485
Query: 244 EEYK 247
+ YK
Sbjct: 486 KVYK 489
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 59/245 (24%), Positives = 103/245 (42%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R + + +T +D+ IK+W+ L + GH V + S + S
Sbjct: 204 GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSC 263
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H 131
DK V W++ + +R + H S V + + V+++ S+D+T +WDV++++ H
Sbjct: 264 GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVH 323
Query: 132 ----HP-----IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H ++C + + QI GS D I W LV TL + K V ++
Sbjct: 324 TLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRAVVL 379
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDE-CLRLF 235
HP S +N+K W + G I++ T + +L D + L+
Sbjct: 380 HPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINT-LTVNSDGVLVSGADNGTMHLW 438
Query: 236 DKATG 240
D TG
Sbjct: 439 DWRTG 443
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/201 (26%), Positives = 81/201 (40%)
Query: 134 IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSS-QISTLIH-SVGKAVVNSLCSHPTRKHIM 190
++C +Q F GS+D I W L ++S H S + V+ S TR +
Sbjct: 206 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-----TRSPYL 260
Query: 191 SACGNN--VKLWTAEEDY---GQEPIVDACFTRDCQ----CILTCSTDECLRLFDKATGE 241
+CG + VK W E + + A + D ++TCS D R++D T
Sbjct: 261 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 320
Query: 242 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 301
+ GH + + C + + QI GS D I W LV TL + K V +
Sbjct: 321 SVHTLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRA 376
Query: 302 LCSHPTRKHIMSACGNNVKLW 322
+ HP S +N+K W
Sbjct: 377 VVLHPRHYTFASGSPDNIKQW 397
>TAIR|locus:2027749 [details] [associations]
symbol:SMU1 "AT1G73720" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GO:GO:0005634 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 GO:GO:0080008
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K13111
OMA:NGHWDTV EMBL:AF462796 EMBL:AY102129 IPI:IPI00544131
RefSeq:NP_177513.2 UniGene:At.27865 ProteinModelPortal:Q8W117
SMR:Q8W117 IntAct:Q8W117 PaxDb:Q8W117 PRIDE:Q8W117
EnsemblPlants:AT1G73720.1 GeneID:843707 KEGG:ath:AT1G73720
TAIR:At1g73720 InParanoid:Q8W117 PhylomeDB:Q8W117
ProtClustDB:CLSN2690492 Genevestigator:Q8W117 Uniprot:Q8W117
Length = 511
Score = 146 (56.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 35/129 (27%), Positives = 65/129 (50%)
Query: 1 MEYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGS-DKKIKLWNPYRNLLLKTYGGHAHEVN 59
++Y ++ + + F+ D S L GS D KIK+W + ++ + H+ V
Sbjct: 251 LQYQADESFMMHDDPVLCIDFSRD-SEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVT 309
Query: 60 DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDN 119
+ + D SQ+ S + D++ + + +G+ ++ +R H S V F D S +I+ S D
Sbjct: 310 SLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDC 369
Query: 120 TVMMWDVKS 128
TV +WD K+
Sbjct: 370 TVKVWDSKT 378
Score = 145 (56.1 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 12 KQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHE---VNDATAAC--- 65
K+ RF+ DG + + D I++W+ L K A E ++D C
Sbjct: 212 KKSHAECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDF 271
Query: 66 --DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMM 123
DS +ASG+ D + +W + TG +RR+ H+ VT + F+ D S ++S S D T +
Sbjct: 272 SRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI 331
Query: 124 WDVKS 128
+KS
Sbjct: 332 HGLKS 336
Score = 116 (45.9 bits), Expect = 0.00073, P = 0.00073
Identities = 43/166 (25%), Positives = 69/166 (41%)
Query: 129 RSHHPIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNS----LCSH 183
+SH +C S D Q SS DG I W + L + ++ + LC
Sbjct: 213 KSH--AECARFSPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCID 270
Query: 184 PTRKHIMSACGNN---VKLWTAEE-------DYGQEPIVDACFTRDCQCILTCSTDECLR 233
+R M A G+ +K+W D + + F+RD +L+ S D+ R
Sbjct: 271 FSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTAR 330
Query: 234 LFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKW 279
+ +G+LL+E++GH S + S S+I SSD + W
Sbjct: 331 IHGLKSGKLLKEFRGHTS--YVNHAIFTSDGSRIITASSDCTVKVW 374
Score = 77 (32.2 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 24/111 (21%), Positives = 53/111 (47%)
Query: 216 FTRDCQCILTCSTDECLRLFDKATGELLEEYK-GHKSG-DFRIECCLDSKDSQIFCGSSD 273
F ++ + I+ C+ + + G++++ + G++ G DF + C+ +K I+C D
Sbjct: 404 FPKNTEHIVVCNKTSSIYIMT-LQGQVVKSFSSGNREGGDF-VAACVSTKGDWIYCIGED 461
Query: 274 GKIYKWQLVDSS-QISTLIHSVGKAVVNSLCSHPTRKHIMSACGN-NVKLW 322
K+Y + + ++H K V+ + HP R + + + +KLW
Sbjct: 462 KKLYCFNYQSGGLEHFMMVHE--KDVIG-ITHHPHRNLLATYSEDCTMKLW 509
>SGD|S000000668 [details] [associations]
symbol:RSA4 "WD-repeat protein involved in ribosome
biogenesis" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0005840 "ribosome" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0042254 "ribosome biogenesis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000000668 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:X59720 EMBL:BK006937
GeneTree:ENSGT00690000102167 GO:GO:0000027 KO:K14855 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 OrthoDB:EOG4PP1R9 EMBL:AY692666
PIR:S19487 RefSeq:NP_009997.2 ProteinModelPortal:P25382 SMR:P25382
DIP:DIP-5365N IntAct:P25382 MINT:MINT-531710 STRING:P25382
PaxDb:P25382 PeptideAtlas:P25382 EnsemblFungi:YCR072C GeneID:850435
KEGG:sce:YCR072C CYGD:YCR072c NextBio:966027 Genevestigator:P25382
GermOnline:YCR072C Uniprot:P25382
Length = 515
Score = 179 (68.1 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 56/262 (21%), Positives = 120/262 (45%)
Query: 34 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTT-GQPVRR 92
D IK+W+ + T GH + V+ + SG+ D++V +W++ + G+ +
Sbjct: 257 DGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSGSHDRTVRVWDINSQGRCINI 315
Query: 93 WREHASKVTCVKFNEDSSVVI-----SGSQDNTVMMWDVKSRSHHPIQCCLDSKDSQIFC 147
+ HA V + + D ++ I +G + +T K+ ++ C + ++
Sbjct: 316 LKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMV 375
Query: 148 GSSDG-KIYKWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 204
+SD ++ W + S++ + G + +VN + P ++I+SA N++KLW +
Sbjct: 376 TASDDYTMFLWNPLKSTK--PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD 433
Query: 205 DY------GQ-EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIE 257
G + ++ DC+ +++CS D L+++D T +L + GHK + ++
Sbjct: 434 GKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVD 493
Query: 258 CCLDSKDSQIFCGSSDGKIYKW 279
+D K ++ G D + W
Sbjct: 494 WSVDGK--RVCSGGKDKMVRLW 513
Score = 146 (56.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 31/102 (30%), Positives = 54/102 (52%)
Query: 29 LTCGSDKKIKLWNPYRNLL-LKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG 87
+T D + LWNP ++ + GH VN + D I S + D S+ LW+ G
Sbjct: 375 VTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDG 434
Query: 88 QPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSR 129
+ + +R H + V V ++ D +++S S+D T+ +WDV++R
Sbjct: 435 KFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTR 476
Score = 138 (53.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 27/77 (35%), Positives = 43/77 (55%)
Query: 53 GHAHEVN-DATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSV 111
GH + A A SS++ +GA D + +W+ T P+ + H + V CV ++ D V
Sbjct: 141 GHGSTILCSAFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEV 200
Query: 112 VISGSQDNTVMMWDVKS 128
+ +GS DNT+ +WD KS
Sbjct: 201 IATGSMDNTIRLWDPKS 217
Score = 135 (52.6 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 31/112 (27%), Positives = 51/112 (45%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
Q + V F+ DG Y ++ D IKLW+ + T+ GH V + D + S
Sbjct: 402 QKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVS 461
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
+ D ++ +W+V T + H +V V ++ D V SG +D V +W
Sbjct: 462 CSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 116 (45.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 32/134 (23%), Positives = 58/134 (43%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLL-KTYGGHAHEVNDAT 62
T + T+ + V ++ DG T D I+LW+P L GH+ + +
Sbjct: 177 TPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLS 236
Query: 63 -------AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 115
++AS + D ++ +W+ + H + V+CVK+ ++ SG
Sbjct: 237 WEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-GQGLLYSG 295
Query: 116 SQDNTVMMWDVKSR 129
S D TV +WD+ S+
Sbjct: 296 SHDRTVRVWDINSQ 309
Score = 107 (42.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 37/162 (22%), Positives = 68/162 (41%)
Query: 26 SYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVT 85
S +T D ++W+ + T GH + V + + D IA+G+ D ++ LW+
Sbjct: 157 SRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPK 216
Query: 86 TGQPVR-RWREHASKVTCVKFNEDSSV-------VISGSQDNTVMMWDVKSR------SH 131
+GQ + R H+ +T + + V + S S+D T+ +WD SR S
Sbjct: 217 SGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSG 276
Query: 132 HP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS 171
H + C ++ GS D + W + + ++ S
Sbjct: 277 HTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKS 318
Score = 68 (29.0 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 28/111 (25%), Positives = 53/111 (47%)
Query: 224 LTCSTDECLRL--FDKATGE---LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDG-KIY 277
L+ STD LR+ FD TG+ EE + ++ C + ++ +SD ++
Sbjct: 326 LSLSTDYALRIGAFDH-TGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMF 384
Query: 278 KWQLVDSSQISTLIHSVG-KAVVNSLCSHPTRKHIMSAC-GNNVKLWTAEE 326
W + S++ + G + +VN + P ++I+SA N++KLW +
Sbjct: 385 LWNPLKSTK--PIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD 433
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 179 (68.1 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 57/244 (23%), Positives = 102/244 (41%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R V + Y +CG DK++K W+ N +++ Y GH V + + +
Sbjct: 250 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 309
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSR--- 129
D + +W+V T V H + V V+ +I+GS D T+ +WD+ K+R
Sbjct: 310 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 369
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 187
++H ++ + F S I +W+ D S I L S A++N+L +
Sbjct: 370 TNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNL--SGHNAIINTLTVNSDGV 427
Query: 188 HIMSACGNNVKLWTAEEDYGQEPIVDACF--TRDCQC-ILTCSTDEC-LRLFDKATGELL 243
+ A + LW Y + + A + D + I C+ D+ RL + +
Sbjct: 428 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI 487
Query: 244 EEYK 247
+ YK
Sbjct: 488 KVYK 491
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 59/245 (24%), Positives = 103/245 (42%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R + + +T +D+ IK+W+ L + GH V + S + S
Sbjct: 206 GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSC 265
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H 131
DK V W++ + +R + H S V + + V+++ S+D+T +WDV++++ H
Sbjct: 266 GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVH 325
Query: 132 ----HP-----IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H ++C + + QI GS D I W LV TL + K V ++
Sbjct: 326 TLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRAVVL 381
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDE-CLRLF 235
HP S +N+K W + G I++ T + +L D + L+
Sbjct: 382 HPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINT-LTVNSDGVLVSGADNGTMHLW 440
Query: 236 DKATG 240
D TG
Sbjct: 441 DWRTG 445
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/201 (26%), Positives = 81/201 (40%)
Query: 134 IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSS-QISTLIH-SVGKAVVNSLCSHPTRKHIM 190
++C +Q F GS+D I W L ++S H S + V+ S TR +
Sbjct: 208 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-----TRSPYL 262
Query: 191 SACGNN--VKLWTAEEDY---GQEPIVDACFTRDCQ----CILTCSTDECLRLFDKATGE 241
+CG + VK W E + + A + D ++TCS D R++D T
Sbjct: 263 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 322
Query: 242 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 301
+ GH + + C + + QI GS D I W LV TL + K V +
Sbjct: 323 SVHTLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRA 378
Query: 302 LCSHPTRKHIMSACGNNVKLW 322
+ HP S +N+K W
Sbjct: 379 VVLHPRHYTFASGSPDNIKQW 399
>UNIPROTKB|F1MUW4 [details] [associations]
symbol:APAF1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051402 "neuron apoptotic process" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0016505 "apoptotic
protease activator activity" evidence=IEA] [GO:0008635 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process by cytochrome c" evidence=IEA] [GO:0006309 "apoptotic DNA
fragmentation" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0043531 "ADP binding" evidence=IEA] [GO:0006952 "defense
response" evidence=IEA] InterPro:IPR017986 InterPro:IPR000767
InterPro:IPR001315 InterPro:IPR001680 InterPro:IPR002182
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00619 Pfam:PF00931
PRINTS:PR00364 PROSITE:PS50082 PROSITE:PS50209 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005794 GO:GO:0006952
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030900
GO:GO:0051402 GO:GO:0043531 GO:GO:0001843 GO:GO:0006309
GO:GO:0008635 Gene3D:1.10.533.10 InterPro:IPR011029 SUPFAM:SSF47986
GO:GO:0043293 GO:GO:0016505 OMA:KVCKNSA InterPro:IPR017251
PIRSF:PIRSF037646 GeneTree:ENSGT00700000104017 EMBL:DAAA02013647
EMBL:DAAA02013645 EMBL:DAAA02013646 IPI:IPI00689090
Ensembl:ENSBTAT00000028867 Uniprot:F1MUW4
Length = 1251
Score = 184 (69.8 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 61/276 (22%), Positives = 116/276 (42%)
Query: 9 IDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSS 68
I + + F+ D + TC DKK+K+WN L++ Y H+ +VN +S+
Sbjct: 655 IKAHEDEVLCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSN 714
Query: 69 QI--ASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
+ A+G++D + LW++ + H + V+ +F+ D V+ S S D T+ +WDV
Sbjct: 715 HLLLATGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDV 774
Query: 127 KSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
KS + ++ K Q F S + + + ++ S + + +
Sbjct: 775 KSANERK---SINVK--QFFLNSEEPQ-------EDLEVIVKCCSWSADGAKIMVAAKNK 822
Query: 187 KHIMSACGNNVKLWTAEEDYGQEPIVDAC-FTRDCQCILTCSTDECLRLFDKATGELLEE 245
+ + + AE G V C F+ + + C+ L+ +G + +
Sbjct: 823 VFLFDIHSSGL---LAEMHMGHHSAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVAD 879
Query: 246 YKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQ 280
+GH S + C + S D F SSD + + W+
Sbjct: 880 CRGHLSW---VHCVMFSPDGSSFLTSSDDQTIRLWE 912
Score = 169 (64.5 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 49/194 (25%), Positives = 90/194 (46%)
Query: 21 FNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVI 80
F+ DG +CG+DK ++++ L H EV + D IA+ + DK V
Sbjct: 625 FSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSADDKFIATCSVDKKVK 684
Query: 81 LWEVTTGQPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDVKSRS-------H 131
+W TG+ VR + EH+ +V C F +S+ ++ +GS D + +WD+ H
Sbjct: 685 IWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGSNDYFLKLWDLNQEECRNTMFGH 744
Query: 132 -HPIQCCLDSKDSQIFCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
+ + C S D Q+ S+DG + W + +++ ++ +V + +NS + I
Sbjct: 745 TNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKSI--NVKQFFLNSEEPQEDLEVI 802
Query: 190 MSACGNNVKLWTAE 203
+ C W+A+
Sbjct: 803 VKCCS-----WSAD 811
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/125 (30%), Positives = 58/125 (46%)
Query: 209 EPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIF 268
+ + ACF+ D Q I +C D+ L++F TGE L E K H+ + CC S D +
Sbjct: 618 DAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHED---EVLCCAFSADDKFI 674
Query: 269 CGSS-DGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK--HIMSACGNN---VKLW 322
S D K+ W + + I+ VN C H T H++ A G+N +KLW
Sbjct: 675 ATCSVDKKVKIWNSMTGELVR--IYDEHSEQVN--CCHFTNNSNHLLLATGSNDYFLKLW 730
Query: 323 TAEED 327
++
Sbjct: 731 DLNQE 735
Score = 129 (50.5 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 69/332 (20%), Positives = 149/332 (44%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRN-LLLKTYGGHAHEVNDATAACDSS---QIA 71
++ ++ DG+ + +K + L++ + + LL + + GH H A CD S +A
Sbjct: 803 VKCCSWSADGAKIMVAAKNK-VFLFDIHSSGLLAEMHMGH-HS---AVQYCDFSPHNHLA 857
Query: 72 SGA-SDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-- 128
A S V LW + +G V R H S V CV F+ D S ++ S D T+ +W+ K
Sbjct: 858 VVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVC 917
Query: 129 -RSHHPIQCCLDS--KDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPT 185
S ++ +D +++++ + D I + QL++ + + I + +A V+ C P
Sbjct: 918 KNSATVLKQEIDVVFQENEVTVLAVDN-IRRLQLINGN--TGQIDYLTEAQVSCCCLSPH 974
Query: 186 RKHIMSACGN---------NVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+++ + N +++ + + + + FT D + +++ S D +++++
Sbjct: 975 LQYLAFGGEDGAIQILELLNNRIFQSRNGH-KTTVRHIQFTADGKTLISSSDDSAVQIWN 1033
Query: 237 KATGE--LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSS-QISTLIHS 293
+ + L+ ++ DFR+ K+S++ S DG + W ++ + + H
Sbjct: 1034 WQSEDPFFLQAHQ-ETVKDFRL-----LKNSRLLSWSFDGTVKVWNIITRRIEKDFVCHQ 1087
Query: 294 VGKAVVNSLCSHPTRKHIMSACGNNVKLWTAE 325
V++ S K ++ K+W+ E
Sbjct: 1088 --DTVLSCDISSDATKFSSTSADKTAKIWSFE 1117
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 167 (63.8 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
IR+V F+ DG+Y T DK +K+W+ + + T+ GH ++ + D I SG+
Sbjct: 330 IRSVCFSPDGNYLATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIVSGSG 389
Query: 76 DKSVILWEVTTGQPVRRW--REHASK--VTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
DK +W++ G+ E K VT V + D +V +GS DN V +WD ++
Sbjct: 390 DKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYF 449
Query: 132 -HPIQCCLDSKDSQIFCGSSDGK 153
+ LDS S F S DGK
Sbjct: 450 LERYEGHLDSVYSVAF--SPDGK 470
Score = 164 (62.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 39/125 (31%), Positives = 61/125 (48%)
Query: 12 KQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIA 71
K G + +V + DG D ++LW+ L+ Y GH V + D +A
Sbjct: 415 KNG-VTSVAMSPDGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLA 473
Query: 72 SGASDKSVILWEVTTGQPVRRWRE----HASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
SG+ DKS+ LW+++ + R R H V V F+ D S +ISGS+D +V WD +
Sbjct: 474 SGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPR 533
Query: 128 SRSHH 132
+ + H
Sbjct: 534 NGTTH 538
Score = 152 (58.6 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 44/156 (28%), Positives = 73/156 (46%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG----GHAHEVNDATAACDSSQIA 71
I ++ ++ DG + ++ DKK K+W+ + T G G + V + D +A
Sbjct: 372 IYSLDYSSDGRFIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVA 431
Query: 72 SGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK-SRS 130
+G+ D V LW+ TG + R+ H V V F+ D + SGS D ++ +WD+ SRS
Sbjct: 432 AGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRS 491
Query: 131 HHPIQCCLDS-KDSQIFCG-SSDGKIYKWQLVDSSQ 164
+ + KD + S DG W L+ S+
Sbjct: 492 RSRCRATFNGHKDFVLSVAFSPDGS---W-LISGSK 523
Score = 55 (24.4 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 14/71 (19%), Positives = 30/71 (42%)
Query: 211 IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFC- 269
++ F+ D +++ S D ++ +D G +GHK+ + + +F
Sbjct: 506 VLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFAT 565
Query: 270 GSSDGKIYKWQ 280
GS D + W+
Sbjct: 566 GSGDFRSRLWK 576
>UNIPROTKB|B4DF38 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016787 GO:GO:0005874 HOGENOM:HOG000184015 InterPro:IPR017252
PANTHER:PTHR22847:SF51 UniGene:Hs.77318 HGNC:HGNC:8574
ChiTaRS:PAFAH1B1 EMBL:AC015799 EMBL:AC005696 EMBL:AK293918
IPI:IPI00909586 SMR:B4DF38 STRING:B4DF38 Ensembl:ENST00000451360
UCSC:uc010vqz.2 HOVERGEN:HBG103859 Uniprot:B4DF38
Length = 205
Score = 157 (60.3 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 51/210 (24%), Positives = 95/210 (45%)
Query: 37 IKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREH 96
IKLW+ ++T GH H V+ + I S + DK++ +WEV TG V+ + H
Sbjct: 3 IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGH 62
Query: 97 ASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSH-HPIQCCLDSKDSQIFCG 148
V V+ N+D +++ S S D TV +W V + R H H ++C + +S
Sbjct: 63 REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--- 119
Query: 149 SSDGKIYKWQLVDSSQI-STLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEEDY 206
SS + ++ + + L HS GK +++ C+ + +K A E +
Sbjct: 120 SSISEATGSEVGHDNWVRGVLFHSGGKFILS--CADDKTLRVWDYKNKRCMKTLNAHEHF 177
Query: 207 GQEPIVDACFTRDCQCILTCSTDECLRLFD 236
+ F + ++T S D+ +++++
Sbjct: 178 ----VTSLDFHKTAPYVVTGSVDQTVKVWE 203
Score = 144 (55.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 45/200 (22%), Positives = 86/200 (43%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 11 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 70
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS + +
Sbjct: 71 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSEV 130
Query: 123 MWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLC 181
D + ++ L + +D K + W + + TL + + V SL
Sbjct: 131 GHD------NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTSLD 182
Query: 182 SHPTRKHIMS-ACGNNVKLW 200
H T ++++ + VK+W
Sbjct: 183 FHKTAPYVVTGSVDQTVKVW 202
Score = 108 (43.1 bits), Expect = 0.00089, P = 0.00089
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASGA 74
+R V F+ G + L+C DK +++W+ Y+N +KT H H V + + +G+
Sbjct: 136 VRGVLFHSGGKFILSCADDKTLRVWD-YKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGS 194
Query: 75 SDKSVILWE 83
D++V +WE
Sbjct: 195 VDQTVKVWE 203
>RGD|1310215 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II, p300/CBP-associated
factor (PCAF)-associated factor" species:10116 "Rattus norvegicus"
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] [GO:0004402 "histone
acetyltransferase activity" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310215 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:BC098861 IPI:IPI00359892 UniGene:Rn.23853
ProteinModelPortal:Q4G004 UCSC:RGD:1310215 InParanoid:Q4G004
ArrayExpress:Q4G004 Genevestigator:Q4G004 Uniprot:Q4G004
Length = 143
Score = 157 (60.3 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 27/95 (28%), Positives = 53/95 (55%)
Query: 34 DKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRW 93
DK ++LW+ + ++ + GH V + + + +AS D+ + LW++ +G +
Sbjct: 1 DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKEL 60
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS 128
R H +T + F+ DS ++ S S DN+V +WD++S
Sbjct: 61 RGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 95
Score = 123 (48.4 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 31/119 (26%), Positives = 60/119 (50%)
Query: 13 QGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIAS 72
+G + ++ F+ +G Y + G D+++KLW+ L K GH + + DS IAS
Sbjct: 22 RGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIAS 81
Query: 73 GASDKSVILWEV-----------TTGQPVRRWREHASKVTCVKFNEDSSVVISG-SQDN 119
+ D SV +W++ ++G+ V + S V V+F + ++++G +Q+N
Sbjct: 82 ASMDNSVRVWDIRSTCCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQEN 140
>POMBASE|SPBC1289.11 [details] [associations]
symbol:spf38 "splicing factor Spf38" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1289.11
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0045292 PIR:T39362 RefSeq:NP_596835.1
ProteinModelPortal:O94620 IntAct:O94620 STRING:O94620
EnsemblFungi:SPBC1289.11.1 GeneID:2539984 KEGG:spo:SPBC1289.11
HOGENOM:HOG000091644 KO:K12857 OMA:HAGSVNE OrthoDB:EOG43BQZ4
NextBio:20801127 Uniprot:O94620
Length = 340
Score = 175 (66.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 51/198 (25%), Positives = 95/198 (47%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYG---GHAHEVNDATAACDSSQIAS 72
+ RF+ GSY + G D++I LWN + ++ K YG G + D + DS +
Sbjct: 53 VLVARFDPSGSYFASGGMDRQILLWNVFGDV--KNYGVLNGCKGAITDLQWSRDSRVVYC 110
Query: 73 GASDKSVILWEVTTGQPVRRWREHASKVTCVK-FNEDSSVVISGSQDNTVMMWDVKSRS- 130
+SD ++ W+ +GQ +R+ + HA V + S ++ S S D T+ +WD +S+
Sbjct: 111 SSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDC 170
Query: 131 ------HHPIQC-CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSH 183
+P+ + + +Q+F G DG I W L ++ S ++ K ++ SL
Sbjct: 171 IKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDL-RNNHCSHVLKG-HKDIITSLAIS 228
Query: 184 PTRKHIMS-ACGNNVKLW 200
++S + N V+++
Sbjct: 229 KDGSSLLSNSMDNTVRIF 246
Score = 117 (46.2 bits), Expect = 0.00029, P = 0.00029
Identities = 51/203 (25%), Positives = 82/203 (40%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASK--VTCVKFNEDSS 110
GH EV A S ASG D+ ++LW V G + K +T ++++ DS
Sbjct: 48 GHTAEVLVARFDPSGSYFASGGMDRQILLWNVF-GDVKNYGVLNGCKGAITDLQWSRDSR 106
Query: 111 VVISGSQDNTVMMWDV-------KSRSHHPIQCCLD--SKDSQIFCGSSDGKIYK-WQLV 160
VV S D +M WD K + H + LD S++ SD K W
Sbjct: 107 VVYCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSR 166
Query: 161 DSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDA 214
I T+ V ++ T+ I G +K+W ++ G + I+ +
Sbjct: 167 SKDCIKTIEEKYPLTAV-AIAQQGTQVFIGGIDGA-IKIWDLRNNHCSHVLKGHKDIITS 224
Query: 215 -CFTRDCQCILTCSTDECLRLFD 236
++D +L+ S D +R+FD
Sbjct: 225 LAISKDGSSLLSNSMDNTVRIFD 247
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 177 (67.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 40/138 (28%), Positives = 68/138 (49%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ ++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVEDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 150 (57.9 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 71/322 (22%), Positives = 128/322 (39%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVEDISFDHSGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ 135
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V++
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGY----- 225
Query: 136 CCLDSKDSQIFCGSSDGKIYKW-QLVDSSQISTLIHSVGK-------AVVNSLCSHPTRK 187
C+ + F G + W ++V +Q TLI S V C R+
Sbjct: 226 -CVKT-----FTGHRE-----WVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274
Query: 188 HI-MSACGNNVKLWTAEEDYGQEPIVDACFTRDC----QCILTCSTDECLRLFDKATGEL 242
H + C + W E Y T+ +L+ S D+ ++++D +TG
Sbjct: 275 HEHVVECIS----WAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330
Query: 243 LEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNS 301
L GH D + L + +D K + W + + TL + + V S
Sbjct: 331 LMTLVGH---DNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTL--NAHEHFVTS 385
Query: 302 LCSHPTRKHIMS-ACGNNVKLW 322
L H T ++++ + VK+W
Sbjct: 386 LDFHKTAPYVVTGSVDQTVKVW 407
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 55/238 (23%), Positives = 101/238 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK IK+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + IAS ++D++V +W V T + REH V C+ + +SS S + T
Sbjct: 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY--SSISEATGS 299
Query: 123 MWDVKSRSHHPIQCCLD-SKDSQIFCGSSDGKIYKWQLV--DSSQISTLIHSVGKAVVNS 179
+ K +S P L S+D I + LV D+ L HS GK +++
Sbjct: 300 --ETK-KSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS- 355
Query: 180 LCSHPTRKHIMSACGNN-VKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFD 236
C+ + +K A E + + F + ++T S D+ +++++
Sbjct: 356 -CADDKTLRVWDYKNKRCMKTLNAHEHF----VTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V I S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ + V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410
>DICTYBASE|DDB_G0289115 [details] [associations]
symbol:mhkB "myosin heavy chain kinase B"
species:44689 "Dictyostelium discoideum" [GO:0018107
"peptidyl-threonine phosphorylation" evidence=IDA] [GO:0031037
"myosin II filament disassembly" evidence=IMP] [GO:0005826
"actomyosin contractile ring" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0046777
"protein autophosphorylation" evidence=IDA] [GO:0045159 "myosin II
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA;IC]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA;IDA] [GO:0016905 "myosin heavy chain kinase activity"
evidence=IEA;IDA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR004166 InterPro:IPR011009 InterPro:IPR015943
Pfam:PF00400 Pfam:PF02816 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS51158 SMART:SM00320 SMART:SM00811 dictyBase:DDB_G0289115
GO:GO:0005524 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 SUPFAM:SSF56112 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0046777
GenomeReviews:CM000154_GR GO:GO:0000910 KO:K00924 GO:GO:0005826
GO:GO:0018107 EMBL:AAFI02000130 BRENDA:2.7.11.7 GO:GO:0031037
GO:GO:0016905 EMBL:U90946 RefSeq:XP_636368.1
ProteinModelPortal:P90648 EnsemblProtists:DDB0191333 GeneID:8626969
KEGG:ddi:DDB_G0289115 OMA:NDERNTP ProtClustDB:CLSZ2846619
Uniprot:P90648
Length = 732
Score = 181 (68.8 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 62/250 (24%), Positives = 115/250 (46%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CVQT+ +G + ++ +N Y + SD IK+W+ + + T GH V+ T
Sbjct: 494 CVQTLKGHEGPVESICYN--DQYLFSGSSDHSIKVWDLKKLRCIFTLEGHDKPVH--TVL 549
Query: 65 CDSSQIASGASDKSVILWEVTTGQPVRRWREHAS--KVTCVKFNEDSSVVISGSQDNTVM 122
+ + SG+SDK++ +W++ T + HA K C+ + SGS D T+
Sbjct: 550 LNDKYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS----GQYLFSGSNDKTIK 605
Query: 123 MWDVKS-RSHHPIQ------CCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKA 175
+WD+K+ R ++ ++ + + ++ GS D I W L S + S + +
Sbjct: 606 VWDLKTFRCNYTLKGHTKWVTTICILGTNLYSGSYDKTIRVWNL-KSLECSATLRGHDRW 664
Query: 176 VVNS-LCSHPTRKHIMSACGNN-VKLWTAEEDY------GQEPIVDACFT--RDCQCILT 225
V + +C K + +A +N +K+W E G V C D +C+++
Sbjct: 665 VEHMVICD----KLLFTASDDNTIKIWDLETLRCNTTLEGHNATVQ-CLAVWEDKKCVIS 719
Query: 226 CSTDECLRLF 235
CS D+ +R++
Sbjct: 720 CSHDQSIRVW 729
Score = 124 (48.7 bits), Expect = 0.00016, P = 0.00016
Identities = 62/266 (23%), Positives = 113/266 (42%)
Query: 33 SDKKIKLWNPYR--NL-LLKTYGGHAHEVNDATAACDSSQ-IASGASDKSVILWEVTTGQ 88
SD I++++ Y+ N+ ++T GH V + C + Q + SG+SD S+ +W++ +
Sbjct: 478 SDNSIRVYD-YKSQNMECVQTLKGHEGPVE---SICYNDQYLFSGSSDHSIKVWDLKKLR 533
Query: 89 PVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKS-------RSHHPIQCCLDSK 141
+ H V V N+ + SGS D T+ +WD+K+ SH L
Sbjct: 534 CIFTLEGHDKPVHTVLLND--KYLFSGSSDKTIKVWDLKTLECKYTLESHARAVKTLCIS 591
Query: 142 DSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNVKLWT 201
+F GS+D I W L + + + + K V ++C T + + +++W
Sbjct: 592 GQYLFSGSNDKTIKVWDL-KTFRCNYTLKGHTKWVT-TICILGTNLY-SGSYDKTIRVWN 648
Query: 202 AEEDY------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 255
+ G + V+ D + + T S D ++++D T +GH +
Sbjct: 649 LKSLECSATLRGHDRWVEHMVICD-KLLFTASDDNTIKIWDLETLRCNTTLEGHNA---T 704
Query: 256 IECCL--DSKDSQIFCGSSDGKIYKW 279
++C + K I C S D I W
Sbjct: 705 VQCLAVWEDKKCVISC-SHDQSIRVW 729
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/166 (24%), Positives = 74/166 (44%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV------- 58
V+T + A++++ G +C D +K+W+ ++ + H E+
Sbjct: 348 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHNLQAHRKEIYTIKWSP 407
Query: 59 -NDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 116
T+ +SS +AS + D +V LW++ G R+H V V F+ D + SGS
Sbjct: 408 TGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPDGKYLASGS 467
Query: 117 QDNTVMMWDVKSRSH-HPIQ-------CCLDSKDSQIFCGSSDGKI 154
D V +W+ +S S H Q C +++ ++ +SDG +
Sbjct: 468 FDKCVHIWNTQSGSLVHSYQGTGGIFEVCWNAQGDKVGASASDGSV 513
Score = 126 (49.4 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 28/120 (23%), Positives = 63/120 (52%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ +G I A+++N G+Y L+ G DK +W+ + + + H+ D ++
Sbjct: 267 TLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NN 325
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ AS ++D + + + +PV+ ++ H ++V +K++ ++ S S D T+ +W +K
Sbjct: 326 TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 385
Score = 99 (39.9 bits), Expect = 6.8e-11, Sum P(2) = 6.8e-11
Identities = 26/117 (22%), Positives = 58/117 (49%)
Query: 169 IHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAEEDY-------GQEPIVDACFTRD 219
I+++ + S+P ++++ + V+LW E+ QEP+ F+ D
Sbjct: 400 IYTIKWSPTGPTTSNPNSSIMLASASFDSTVRLWDMEQGVCTHTLRKHQEPVYSVAFSPD 459
Query: 220 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
+ + + S D+C+ +++ +G L+ Y+G G F E C +++ ++ +SDG +
Sbjct: 460 GKYLASGSFDKCVHIWNTQSGSLVHSYQG-TGGIF--EVCWNAQGDKVGASASDGSV 513
Score = 59 (25.8 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
R H S+V +N S ++ SGS D+T +W++
Sbjct: 172 RGHESEVFICAWNPVSDLLASGSGDSTARIWNL 204
>UNIPROTKB|F1NQ45 [details] [associations]
symbol:CDC40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:KRQKRGK GeneTree:ENSGT00530000063583 EMBL:AC145954
IPI:IPI00602126 Ensembl:ENSGALT00000024299 Uniprot:F1NQ45
Length = 580
Score = 179 (68.1 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 53/176 (30%), Positives = 87/176 (49%)
Query: 16 IRAVR-FNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATAACDSSQIASG 73
+ AVR F + G L+C D KIKLW Y + L+T+ GH V D ++ S
Sbjct: 292 VSAVRLFPLSGHMLLSCSMDCKIKLWEVYGDRRCLRTFIGHGKAVRDICFNNAGTRFLSA 351
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVT-CVKFNEDS---SVVISGSQDNTVMMWDVKSR 129
A D+ + LW+ TGQ + R+ KV CVKFN D ++ ++G D ++ WD++S
Sbjct: 352 AYDRYIKLWDTETGQCISRFTNR--KVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 409
Query: 130 S------HH--PIQCCLDSKDSQIFCGSSDGK---IYKWQL-VDSSQIST-LIHSV 172
H + + +++ F +SD K +++W + VD I+ +HS+
Sbjct: 410 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSM 465
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 28/123 (22%), Positives = 58/123 (47%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHA--HEVNDAT 62
C++T A+R + FN G+ L+ D+ IKLW+ + + + V
Sbjct: 325 CLRTFIGHGKAVRDICFNNAGTRFLSAAYDRYIKLWDTETGQCISRFTNRKVPYCVKFNP 384
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
+ +G SDK ++ W++ +G+ V+ + H V + F +++ +S S D ++
Sbjct: 385 DEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLR 444
Query: 123 MWD 125
+W+
Sbjct: 445 VWE 447
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 135 (52.6 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 37/166 (22%), Positives = 75/166 (45%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV------- 58
V+T + A++++ G +C D +K+W+ ++ + H+ E+
Sbjct: 351 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSP 410
Query: 59 -NDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 116
T+ +S+ +AS + D +V LW+V G + +H V V F+ D + SGS
Sbjct: 411 TGPGTSNPNSNIMLASASFDSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGS 470
Query: 117 QDNTVMMWDVKS----RSHHP----IQCCLDSKDSQIFCGSSDGKI 154
D V +W+ +S S+ + C +++ ++ +SDG +
Sbjct: 471 FDKCVHIWNTQSGTLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 516
Score = 127 (49.8 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 30/129 (23%), Positives = 67/129 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ +G I A+++N G+Y L+ G DK +W+ + + + H+ D ++
Sbjct: 270 TLGQHKGPIFALKWNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NN 328
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ AS ++D + + + +PV+ ++ H ++V +K++ ++ S S D T+ +W +K
Sbjct: 329 TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 388
Query: 128 SRSH-HPIQ 135
+ H +Q
Sbjct: 389 QDTCVHDLQ 397
Score = 97 (39.2 bits), Expect = 8.5e-11, Sum P(2) = 8.5e-11
Identities = 34/150 (22%), Positives = 68/150 (45%)
Query: 137 CLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHS-VGKAVVNSLCSHPTRKHIMSACG- 194
C D +I+ D ++ Q S +I T+ S G S+P ++++
Sbjct: 376 CSDDMTLKIWSMKQDTCVHDLQ-AHSKEIYTIKWSPTGPGT-----SNPNSNIMLASASF 429
Query: 195 -NNVKLWTAEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEY 246
+ V+LW + QEP+ F+ D + + + S D+C+ +++ +G L+ Y
Sbjct: 430 DSTVRLWDVDRGVCIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQSGTLVHSY 489
Query: 247 KGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
+G G F E C +++ ++ +SDG +
Sbjct: 490 RG-TGGIF--EVCWNARGDKVGASASDGSV 516
Score = 80 (33.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 24/103 (23%), Positives = 47/103 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ ++ +N DG+ T D ++W NL T G H + + I S
Sbjct: 237 VTSLDWNSDGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALKWNKKGNYILSAGV 295
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 118
DK+ I+W+ TG+ +++ H++ V + ++++ S S D
Sbjct: 296 DKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTD 337
Score = 64 (27.6 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSH 131
R H S+V +N S ++ SGS D+T +W++ S+
Sbjct: 175 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLNENSN 212
>CGD|CAL0004039 [details] [associations]
symbol:orf19.3301 species:5476 "Candida albicans" [GO:0043224
"nuclear SCF ubiquitin ligase complex" evidence=IEA] [GO:0030174
"regulation of DNA-dependent DNA replication initiation"
evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=IEA] [GO:0031146 "SCF-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0000114 "regulation of
transcription involved in G1 phase of mitotic cell cycle"
evidence=IEA] [GO:0046686 "response to cadmium ion" evidence=IEA]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=IEA]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
[GO:0030674 "protein binding, bridging" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR001810
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 CGD:CAL0004039
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
SUPFAM:SSF81383 EMBL:AACQ01000045 EMBL:AACQ01000042 KO:K10259
RefSeq:XP_718124.1 RefSeq:XP_718393.1 ProteinModelPortal:Q5A933
STRING:Q5A933 GeneID:3639919 GeneID:3640178 KEGG:cal:CaO19.10811
KEGG:cal:CaO19.3301 Uniprot:Q5A933
Length = 735
Score = 180 (68.4 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 75/302 (24%), Positives = 125/302 (41%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAA 64
CV+T+ +RA+ F D ++ G D IK+WN + + TY GH DA +
Sbjct: 415 CVKTLTGHTKGVRALVF--DNQKLISGGLDSTIKVWNYHTGQCIATYRGH----EDAVVS 468
Query: 65 CD--SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVM 122
D + I SG++D +V +W V + + R H V VK + S+ + S S D T+
Sbjct: 469 VDFTNKSIVSGSADHTVRVWHVDS-RTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIR 527
Query: 123 MWDVKSRSHHPIQCCLDSKD--SQIFCGSSDGKIYKWQLVDS---SQISTLIHSVGKAVV 177
MWD+ S + +++ Q+ C YK +L++ S +S
Sbjct: 528 MWDMNSNECIKVFGGMENNGHIGQVQCIIPF--TYKEELIEDESESDSENNQNSTTTTTT 585
Query: 178 NSLCSHPTRKHIMSACG-NNVKLWTAEEDYGQEPIVDA-------CFTRDCQC--ILTCS 227
S + T + + G NN+ L + + T + LT +
Sbjct: 586 TSAAATATATAMGATLGTNNISLPNDTATINRSTFTPSNNNTATTATTPNSYPTHFLTSA 645
Query: 228 TDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQI 287
D ++L+D ATG+ + GH G + I D+ +I G+ D I W L + +
Sbjct: 646 LDNTIKLWDVATGKCIRTQFGHIEGVWSIAA--DT--FRIISGAHDRLIKVWDLQNGKCL 701
Query: 288 ST 289
T
Sbjct: 702 HT 703
Score = 168 (64.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 46/162 (28%), Positives = 72/162 (44%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC 65
++T + ++FN Y +T D IK+W +KT GH V
Sbjct: 376 IKTFTGHSDGVTCLQFN--RKYLMTGSYDTTIKIWKIDSGECVKTLTGHTKGVR--ALVF 431
Query: 66 DSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWD 125
D+ ++ SG D ++ +W TGQ + +R H V V F S ++SGS D+TV +W
Sbjct: 432 DNQKLISGGLDSTIKVWNYHTGQCIATYRGHEDAVVSVDFTNKS--IVSGSADHTVRVWH 489
Query: 126 VKSRSHHPIQCCLD--------SKDSQIFCGSSDGKIYKWQL 159
V SR+ + ++ D S + IF S D I W +
Sbjct: 490 VDSRTCYTLRGHTDWVNHVKIHSASNTIFSASDDTTIRMWDM 531
Score = 44 (20.5 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 304 SHPTRKHIMSACGNNVKLW 322
S+PT + SA N +KLW
Sbjct: 636 SYPTH-FLTSALDNTIKLW 653
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 134 (52.2 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 37/166 (22%), Positives = 74/166 (44%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV------- 58
V+T + A++++ G +C D +K+W+ + + + H E+
Sbjct: 405 VKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSP 464
Query: 59 -NDATAACDSS-QIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGS 116
AT+ +S+ +AS + D +V LW++ G +H V V F+ D + SGS
Sbjct: 465 TGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPDGKYLASGS 524
Query: 117 QDNTVMMWDVKS----RSHHP----IQCCLDSKDSQIFCGSSDGKI 154
D V +W+ +S S+ + C +++ ++ +SDG +
Sbjct: 525 FDKCVHIWNTQSGNLVHSYRGTGGIFEVCWNARGDKVGASASDGSV 570
Score = 126 (49.4 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 30/129 (23%), Positives = 66/129 (51%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ +G I A+++N G+Y L+ G DK +W+ + + + H+ D ++
Sbjct: 324 TLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQ-NN 382
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ AS ++D + + + +PV+ ++ H ++V +K++ ++ S S D T+ +W +K
Sbjct: 383 TTFASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMK 442
Query: 128 SR-SHHPIQ 135
H +Q
Sbjct: 443 QEVCIHDLQ 451
Score = 99 (39.9 bits), Expect = 9.2e-11, Sum P(2) = 9.2e-11
Identities = 26/117 (22%), Positives = 57/117 (48%)
Query: 169 IHSVGKAVVNSLCSHPTRKHIMSACG--NNVKLWTAEEDY-------GQEPIVDACFTRD 219
I+++ + S+P ++++ + V+LW E QEP+ F+ D
Sbjct: 457 IYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPVYSVAFSPD 516
Query: 220 CQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
+ + + S D+C+ +++ +G L+ Y+G G F E C +++ ++ +SDG +
Sbjct: 517 GKYLASGSFDKCVHIWNTQSGNLVHSYRG-TGGIF--EVCWNARGDKVGASASDGSV 570
Score = 77 (32.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 23/103 (22%), Positives = 47/103 (45%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ ++ +N +G+ T D ++W NL T G H + + I S
Sbjct: 291 VTSLDWNTNGTLLATGSYDGFARIWTEDGNLA-STLGQHKGPIFALKWNRKGNYILSAGV 349
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQD 118
DK+ I+W+ TG+ +++ H++ V + ++++ S S D
Sbjct: 350 DKTTIIWDAHTGEAKQQFPFHSAPALDVDW-QNNTTFASCSTD 391
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 177 (67.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 57/244 (23%), Positives = 101/244 (41%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R V + Y +CG DK++K W+ N +++ Y GH V + + +
Sbjct: 251 VRGVIVSARSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 310
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSR--- 129
D + +W+V T V H + V VK V++GS D T+ +WD+ K+R
Sbjct: 311 DSTARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQVVTGSHDTTIRLWDLVAGKTRVTL 370
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 187
++H ++ + F S I +W+ D + I L S A++N+L +
Sbjct: 371 TNHKKSVRAVILHPRHYTFASGSPDNIKQWKFPDGNFIQNL--SGHNAIINTLTVNSDGV 428
Query: 188 HIMSACGNNVKLWTAEEDYGQEPIVDACF--TRDCQC-ILTCSTDEC-LRLFDKATGELL 243
+ A + LW Y + + A + D + I C D+ RL + +
Sbjct: 429 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACVFDQSESRLLTAEADKTI 488
Query: 244 EEYK 247
+ YK
Sbjct: 489 KVYK 492
Score = 174 (66.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 58/245 (23%), Positives = 103/245 (42%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R + + +T +D+ IK+W+ L + GH V + S + S
Sbjct: 207 GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSARSPYLFSC 266
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H 131
DK V W++ + +R + H S V + + V+++ S+D+T +WDV++++ H
Sbjct: 267 GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVH 326
Query: 132 ----HP-----IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H ++C + + Q+ GS D I W LV TL + K V ++
Sbjct: 327 TLSGHTNAVATVKC--QAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRAVIL 382
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDE-CLRLF 235
HP S +N+K W + G I++ T + +L D + L+
Sbjct: 383 HPRHYTFASGSPDNIKQWKFPDGNFIQNLSGHNAIINT-LTVNSDGVLVSGADNGTMHLW 441
Query: 236 DKATG 240
D TG
Sbjct: 442 DWRTG 446
Score = 126 (49.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 51/201 (25%), Positives = 81/201 (40%)
Query: 134 IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSS-QISTLIH-SVGKAVVNSLCSHPTRKHIM 190
++C +Q F GS+D I W L ++S H S + V+ S R +
Sbjct: 209 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-----ARSPYL 263
Query: 191 SACGNN--VKLWTAEEDY---GQEPIVDACFTRDCQ----CILTCSTDECLRLFDKATGE 241
+CG + VK W E + + A + D ++TCS D R++D T
Sbjct: 264 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 323
Query: 242 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 301
+ GH + ++C + + Q+ GS D I W LV TL + K V +
Sbjct: 324 SVHTLSGHTNAVATVKC--QAAEPQVVTGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRA 379
Query: 302 LCSHPTRKHIMSACGNNVKLW 322
+ HP S +N+K W
Sbjct: 380 VILHPRHYTFASGSPDNIKQW 400
>UNIPROTKB|E1BYR9 [details] [associations]
symbol:ATG16L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000421 "autophagic vacuole membrane"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00700000104505 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000421 InterPro:IPR013923 Pfam:PF08614
OMA:LETECQE EMBL:AADN02024429 EMBL:AADN02024430 IPI:IPI00589713
Ensembl:ENSGALT00000002475 Uniprot:E1BYR9
Length = 608
Score = 178 (67.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 74/316 (23%), Positives = 135/316 (42%)
Query: 32 GSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTG--QP 89
G+ K++++ P + + + H EVN + S +A+G D+ V LWEV +P
Sbjct: 303 GASKEVRV--PTTAICV--FDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEP 358
Query: 90 VRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK-SRSHHPIQC----CLDSK--- 141
+ +T ++F+ S +++ S D +W V +R H + L +K
Sbjct: 359 KGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLL 418
Query: 142 -DSQIFCGSSDGKIYKWQLVDS-SQISTLIHSVGKAVVNSLCSHPTRKHIMSA-CGNNVK 198
+++I GS D + W L I T+ G + + +C T + +MS ++
Sbjct: 419 DNARIVSGSHDRTLKLWDLRSKVCNIKTVF--AGSSCNDIVC---TEQCVMSGHFDKKIR 473
Query: 199 LWTAE-EDYGQE-PIVDACFTRDCQC----ILTCSTDECLRLFDKATGELLEEY--KGHK 250
W E +E ++ D +LTCS D+ L++ D G + + + +G K
Sbjct: 474 FWDIRTESIVKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVGAVKQTFSAQGFK 533
Query: 251 SGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI--HSVGKAVVNSLCSHPTR 308
G + + GS+DG +Y W ++ TL HS + +N++ P
Sbjct: 534 CGSDWTRVVFSPDGNYVAAGSADGALYVWNVLTGKLERTLAKHHS---SPINAVAWSPAG 590
Query: 309 KHIMSAC-GNNVKLWT 323
H++S GN LW+
Sbjct: 591 AHVVSVDKGNKAVLWS 606
Score = 139 (54.0 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 46/191 (24%), Positives = 78/191 (40%)
Query: 4 TCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATA 63
T + D G + AV+F+ T G D+++KLW + +
Sbjct: 313 TAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGSLSGSNAGITSI 372
Query: 64 ACDS--SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
DS S + + ++D + +W V + H+ KV KF D++ ++SGS D T+
Sbjct: 373 EFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDRTL 432
Query: 122 MMWDVKSRSHHPIQCCLDSKDSQIFC-------GSSDGKIYKWQLVDSSQISTLIHSVGK 174
+WD++S+ + S + I C G D KI W + S + L +G+
Sbjct: 433 KLWDLRSKVCNIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESIVKEL-ELLGR 491
Query: 175 AVVNSLCSHPT 185
L S T
Sbjct: 492 ITALDLNSERT 502
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 40/138 (28%), Positives = 69/138 (50%)
Query: 7 QTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACD 66
+T+ +++ + F+ G +C +D IKLW+ ++T GH H V+ +
Sbjct: 144 RTLKGHTDSVQDISFDQTGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPN 203
Query: 67 SSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV 126
I S + DK++ +WEV TG V+ + H V V+ N+D +++ S S D TV +W V
Sbjct: 204 GDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVRPNQDGTLLASCSNDQTVRVWVV 263
Query: 127 KS-------RSH-HPIQC 136
+ R H H ++C
Sbjct: 264 ATKECKAELREHEHVVEC 281
Score = 133 (51.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 45/201 (22%), Positives = 86/201 (42%)
Query: 3 YTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDAT 62
+ C++T+ + +V +G + ++ DK +K+W +KT+ GH V
Sbjct: 182 FECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTFTGHREWVRMVR 241
Query: 63 AACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSS-VVISGSQDNTV 121
D + +AS ++D++V +W V T + REH V C+ + +S+ IS + +
Sbjct: 242 PNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESAHPTISEATGSE- 300
Query: 122 MMWDVKSRSHHPIQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLI-HSVGKAVVNSL 180
+ KS P + GS D I W + + TL+ H V +
Sbjct: 301 ---NKKSGKPGPF----------LLSGSRDKTIKMWDISTGMCLMTLVGHDNW---VRGV 344
Query: 181 CSHPTRKHIMSACGNN-VKLW 200
HP + ++S + +++W
Sbjct: 345 LFHPGGRFVVSCADDKTLRIW 365
Score = 133 (51.9 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 69/320 (21%), Positives = 130/320 (40%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+ V F+ S ++ D IK+W+ +T GH V D + +AS ++
Sbjct: 111 VTRVIFHPVFSLMVSASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSA 170
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV------KSR 129
D ++ LW+ + +R H V+ V + ++S S+D T+ MW+V K+
Sbjct: 171 DMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTMKMWEVATGYCVKTF 230
Query: 130 SHHP--IQCCLDSKDSQIFCG-SSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTR 186
+ H ++ ++D + S+D + W +V + + + + VV + P
Sbjct: 231 TGHREWVRMVRPNQDGTLLASCSNDQTVRVW-VVATKECKAELRE-HEHVVECISWAPES 288
Query: 187 KH--IMSACGNNVKLWTAEEDYGQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLE 244
H I A G+ E +P F +L+ S D+ ++++D +TG L
Sbjct: 289 AHPTISEATGS-------ENKKSGKP---GPF------LLSGSRDKTIKMWDISTGMCLM 332
Query: 245 EYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLC 303
GH D + L + +D K + W + + TL S + V SL
Sbjct: 333 TLVGH---DNWVRGVLFHPGGRFVVSCADDKTLRIWDYKNKRCMKTL--SAHEHFVTSLD 387
Query: 304 SHPTRKHIMS-ACGNNVKLW 322
H ++++ + VK+W
Sbjct: 388 FHKASPYVVTGSVDQTVKVW 407
Score = 129 (50.5 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 29/103 (28%), Positives = 51/103 (49%)
Query: 25 GSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEV 84
G + L+ DK IK+W+ + L T GH + V + S A DK++ +W+
Sbjct: 308 GPFLLSGSRDKTIKMWDISTGMCLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWDY 367
Query: 85 TTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ ++ H VT + F++ S V++GS D TV +W+ +
Sbjct: 368 KNKRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWECR 410
Score = 114 (45.2 bits), Expect = 0.00087, P = 0.00087
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 5 CVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNL-LLKTYGGHAHEVNDATA 63
C+ T+ +R V F+ G + ++C DK +++W+ Y+N +KT H H V
Sbjct: 330 CLMTLVGHDNWVRGVLFHPGGRFVVSCADDKTLRIWD-YKNKRCMKTLSAHEHFVTSLDF 388
Query: 64 ACDSSQIASGASDKSVILWE 83
S + +G+ D++V +WE
Sbjct: 389 HKASPYVVTGSVDQTVKVWE 408
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 174 (66.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 56/221 (25%), Positives = 102/221 (46%)
Query: 2 EYTCVQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDA 61
EY C T+ + ++ V + + + T SD IK+W+ L T GH ++
Sbjct: 46 EY-C--TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQV 102
Query: 62 TAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTV 121
A S +AS + DK++ +W+ VR + H + V+ + FN ++++SGS D TV
Sbjct: 103 KWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETV 162
Query: 122 MMWDVKSRS-------H-HPIQCCLDSKDSQIFCGSS-DGKIYKWQLVDSSQISTLIHSV 172
+W+++ + H PI S D + +S DG W ++ + TL+ +
Sbjct: 163 RIWNLQDGTCLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPI 222
Query: 173 GKAVVNSLCSHPTRKHIM-SACGNNVKLWTAEEDYGQEPIV 212
+ N L RK+++ S + ++LW DY + +V
Sbjct: 223 NVPLSN-LQFTENRKYLLVSNLNSQIRLW----DYRRNRVV 258
>GENEDB_PFALCIPARUM|PF08_0019 [details] [associations]
symbol:PF08_0019 "receptor for activated C
kinase homolog, PfRACK" species:5833 "Plasmodium falciparum"
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=ISS]
[GO:0005834 "heterotrimeric G-protein complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/201 (22%), Positives = 91/201 (45%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
AI V + DG + L+ D ++LW+ ++++ GH +V + + D+ QI S +
Sbjct: 74 AINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSAS 133
Query: 75 SDKSVILWEVTTG-QPVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMWDVKS--- 128
DK++ LW + ++H +TCV+F+ + ++++S D V +W++K+
Sbjct: 134 RDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 129 ----RSHHPIQCCLDSKDSQIFC--GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H + + C G DG W + + + +L G + +NSLC
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL--ETG-STINSLCF 250
Query: 183 HPTRKHIMSACGNNVKLWTAE 203
P + +A +++W E
Sbjct: 251 SPCDYWLCAATDRFIRIWNLE 271
Score = 168 (64.2 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 60/256 (23%), Positives = 109/256 (42%)
Query: 29 LTCGSDKKIKLWNPYRN-------LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 81
++ DKK+ +WN + K+ GH+ +ND + + D SG+ D SV L
Sbjct: 39 VSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL 98
Query: 82 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ------ 135
W+++ G+ +R + H S V V F+ D+ ++S S+D T+ +W+ ++ + I
Sbjct: 99 WDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTD 158
Query: 136 --CCL---DSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
C+ S + I K+ K W L + L G V+N++ P
Sbjct: 159 WITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTG--VLNTVTISPDGSLC 216
Query: 190 MSACGNNV-KLWTAEED---YGQEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELL 243
S + V KLW +E Y E +++ C L +TD +R+++ + ++
Sbjct: 217 ASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLII 276
Query: 244 EEYKGHKSGDFRIECC 259
E K + C
Sbjct: 277 SEIYPVKQSKIGVPWC 292
Score = 95 (38.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 52 GGHAHEVNDATAACDSS--QIASGASDKSVILWEVTT-------GQPVRRWREHASKVTC 102
GGH+ V + D I S + DK +I+W + T G + H+ +
Sbjct: 18 GGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 103 VKFNEDSSVVISGSQDNTVMMWDV 126
V + D +SGS D++V +WD+
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDL 101
Score = 92 (37.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 38/148 (25%), Positives = 63/148 (42%)
Query: 145 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 203
+ CG D + W L + L G V+N++ P S + V KLW +
Sbjct: 175 VSCGW-DKLVKVWNLKNCDLNKNLEGHTG--VLNTVTISPDGSLCASGGKDGVAKLWDVK 231
Query: 204 ED---YGQEP---IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIE 257
E Y E I CF+ C L +TD +R+++ + ++ E K +
Sbjct: 232 EGKHLYSLETGSTINSLCFS-PCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVP 290
Query: 258 CCLD---SKDSQI-FCGSSDGKIYKWQL 281
C S + Q+ +CGS+DG IY +++
Sbjct: 291 WCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 89 (36.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 42/190 (22%), Positives = 74/190 (38%)
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEEDY 206
GS D + W L I + I V S+ P + I+SA + +KLW
Sbjct: 90 GSWDHSVRLWDLSLGETIRSFIGHTSD--VFSVSFSPDNRQIVSASRDKTIKLWNTLAQC 147
Query: 207 GQEPIVDACFTRDCQC-----------ILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 255
+ I D T C I++C D+ +++++ +L + +GH +G
Sbjct: 148 -KYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGH-TGVLN 205
Query: 256 IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 315
+ S G DG W + + + +L G + +NSLC P + +A
Sbjct: 206 T-VTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL--ETG-STINSLCFSPCDYWLCAAT 261
Query: 316 GNNVKLWTAE 325
+++W E
Sbjct: 262 DRFIRIWNLE 271
>UNIPROTKB|Q8IBA0 [details] [associations]
symbol:PfRACK "Receptor for activated C kinase homolog,
PfRACK" species:36329 "Plasmodium falciparum 3D7" [GO:0007186
"G-protein coupled receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007186
GO:GO:0016301 HSSP:P16649 HOGENOM:HOG000091643 KO:K14753
OMA:IRVWQVM EMBL:AL844507 GenomeReviews:AL844507_GR
RefSeq:XP_001349258.1 ProteinModelPortal:Q8IBA0 SMR:Q8IBA0
PRIDE:Q8IBA0 EnsemblProtists:PF08_0019:mRNA GeneID:2655468
KEGG:pfa:PF08_0019 EuPathDB:PlasmoDB:PF3D7_0826700
ProtClustDB:CLSZ2430992 Uniprot:Q8IBA0
Length = 323
Score = 172 (65.6 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 46/201 (22%), Positives = 91/201 (45%)
Query: 15 AIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGA 74
AI V + DG + L+ D ++LW+ ++++ GH +V + + D+ QI S +
Sbjct: 74 AINDVSISSDGLFALSGSWDHSVRLWDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSAS 133
Query: 75 SDKSVILWEVTTG-QPVRRWREHASKVTCVKFNE--DSSVVISGSQDNTVMMWDVKS--- 128
DK++ LW + ++H +TCV+F+ + ++++S D V +W++K+
Sbjct: 134 RDKTIKLWNTLAQCKYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDL 193
Query: 129 ----RSHHPIQCCLDSKDSQIFC--GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H + + C G DG W + + + +L G + +NSLC
Sbjct: 194 NKNLEGHTGVLNTVTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL--ETG-STINSLCF 250
Query: 183 HPTRKHIMSACGNNVKLWTAE 203
P + +A +++W E
Sbjct: 251 SPCDYWLCAATDRFIRIWNLE 271
Score = 168 (64.2 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 60/256 (23%), Positives = 109/256 (42%)
Query: 29 LTCGSDKKIKLWNPYRN-------LLLKTYGGHAHEVNDATAACDSSQIASGASDKSVIL 81
++ DKK+ +WN + K+ GH+ +ND + + D SG+ D SV L
Sbjct: 39 VSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAINDVSISSDGLFALSGSWDHSVRL 98
Query: 82 WEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRSHHPIQ------ 135
W+++ G+ +R + H S V V F+ D+ ++S S+D T+ +W+ ++ + I
Sbjct: 99 WDLSLGETIRSFIGHTSDVFSVSFSPDNRQIVSASRDKTIKLWNTLAQCKYTITDQQHTD 158
Query: 136 --CCL---DSKDSQIFCGSSDGKIYK-WQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHI 189
C+ S + I K+ K W L + L G V+N++ P
Sbjct: 159 WITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGHTG--VLNTVTISPDGSLC 216
Query: 190 MSACGNNV-KLWTAEED---YGQEP--IVDACFTRDCQCILTCSTDECLRLFDKATGELL 243
S + V KLW +E Y E +++ C L +TD +R+++ + ++
Sbjct: 217 ASGGKDGVAKLWDVKEGKHLYSLETGSTINSLCFSPCDYWLCAATDRFIRIWNLESKLII 276
Query: 244 EEYKGHKSGDFRIECC 259
E K + C
Sbjct: 277 SEIYPVKQSKIGVPWC 292
Score = 95 (38.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 23/84 (27%), Positives = 38/84 (45%)
Query: 52 GGHAHEVNDATAACDSS--QIASGASDKSVILWEVTT-------GQPVRRWREHASKVTC 102
GGH+ V + D I S + DK +I+W + T G + H+ +
Sbjct: 18 GGHSDWVTSVSTPTDPKLKTIVSASRDKKLIVWNINTDDDSGEIGTAKKSLTGHSQAIND 77
Query: 103 VKFNEDSSVVISGSQDNTVMMWDV 126
V + D +SGS D++V +WD+
Sbjct: 78 VSISSDGLFALSGSWDHSVRLWDL 101
Score = 92 (37.4 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 38/148 (25%), Positives = 63/148 (42%)
Query: 145 IFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNNV-KLWTAE 203
+ CG D + W L + L G V+N++ P S + V KLW +
Sbjct: 175 VSCGW-DKLVKVWNLKNCDLNKNLEGHTG--VLNTVTISPDGSLCASGGKDGVAKLWDVK 231
Query: 204 ED---YGQEP---IVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYKGHKSGDFRIE 257
E Y E I CF+ C L +TD +R+++ + ++ E K +
Sbjct: 232 EGKHLYSLETGSTINSLCFS-PCDYWLCAATDRFIRIWNLESKLIISEIYPVKQSKIGVP 290
Query: 258 CCLD---SKDSQI-FCGSSDGKIYKWQL 281
C S + Q+ +CGS+DG IY +++
Sbjct: 291 WCTSLTWSANGQLLYCGSTDGNIYVYEV 318
Score = 89 (36.4 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 42/190 (22%), Positives = 74/190 (38%)
Query: 148 GSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSACGNN-VKLWTAEEDY 206
GS D + W L I + I V S+ P + I+SA + +KLW
Sbjct: 90 GSWDHSVRLWDLSLGETIRSFIGHTSD--VFSVSFSPDNRQIVSASRDKTIKLWNTLAQC 147
Query: 207 GQEPIVDACFTRDCQC-----------ILTCSTDECLRLFDKATGELLEEYKGHKSGDFR 255
+ I D T C I++C D+ +++++ +L + +GH +G
Sbjct: 148 -KYTITDQQHTDWITCVRFSPSPNQAIIVSCGWDKLVKVWNLKNCDLNKNLEGH-TGVLN 205
Query: 256 IECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRKHIMSAC 315
+ S G DG W + + + +L G + +NSLC P + +A
Sbjct: 206 T-VTISPDGSLCASGGKDGVAKLWDVKEGKHLYSL--ETG-STINSLCFSPCDYWLCAAT 261
Query: 316 GNNVKLWTAE 325
+++W E
Sbjct: 262 DRFIRIWNLE 271
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 124 (48.7 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 28/129 (21%), Positives = 69/129 (53%)
Query: 8 TIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDS 67
T+ +G I A+++N G++ L+ G DK +W+ + + + H+ D ++
Sbjct: 257 TLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNN 316
Query: 68 SQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVK 127
+ AS ++D + + ++ +P++ ++ H ++V +K++ +++ S S D T+ +W +K
Sbjct: 317 T-FASCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMK 375
Query: 128 SRSH-HPIQ 135
+ H +Q
Sbjct: 376 QDTCVHDLQ 384
Score = 120 (47.3 bits), Expect = 0.00026, P = 0.00026
Identities = 37/167 (22%), Positives = 73/167 (43%)
Query: 6 VQTIDCKQGAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEV------- 58
++T + A++++ G+ +C D +KLW+ ++ + H+ E+
Sbjct: 338 IKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTCVHDLQAHSKEIYTIKWSP 397
Query: 59 -NDATAACDSS-QIASGAS-DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISG 115
T +++ +A AS D +V LW+ G + +H V V F+ D + SG
Sbjct: 398 TGPGTNNPNANLMLARSASFDSTVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASG 457
Query: 116 SQDNTVMMWDVKS----RSHHP----IQCCLDSKDSQIFCGSSDGKI 154
S D V +W+ +S S+ + C +S ++ +SDG +
Sbjct: 458 SFDKCVHIWNTQSGALVNSYRGTGGIFEVCWNSTGDKVGASASDGSV 504
Score = 98 (39.6 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 25/89 (28%), Positives = 45/89 (50%)
Query: 195 NNVKLWTAEEDY-------GQEPIVDACFTRDCQCILTCSTDECLRLFDKATGELLEEYK 247
+ V+LW AE QEP+ F+ D + + + S D+C+ +++ +G L+ Y+
Sbjct: 419 STVRLWDAERGACIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWNTQSGALVNSYR 478
Query: 248 GHKSGDFRIECCLDSKDSQIFCGSSDGKI 276
G G F E C +S ++ +SDG +
Sbjct: 479 G-TGGIF--EVCWNSTGDKVGASASDGSV 504
Score = 92 (37.4 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 26/108 (24%), Positives = 54/108 (50%)
Query: 30 TCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQP 89
+C +D I + + +KT+ GH +EVN + +AS + D ++ LW +
Sbjct: 320 SCSTDMCIHVCKLGQERPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKLWSMKQDTC 379
Query: 90 VRRWREHASKVTCVKF--------NEDSSVVI--SGSQDNTVMMWDVK 127
V + H+ ++ +K+ N ++++++ S S D+TV +WD +
Sbjct: 380 VHDLQAHSKEIYTIKWSPTGPGTNNPNANLMLARSASFDSTVRLWDAE 427
Score = 62 (26.9 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 94 REHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS 130
R H S+V +N S ++ SGS D+T +W++ S
Sbjct: 162 RGHESEVFICAWNPVSDLLASGSGDSTARIWNLSESS 198
Score = 60 (26.2 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 25/94 (26%), Positives = 45/94 (47%)
Query: 33 SDKKIKLWNPYRNLLLKTYGGHAHEVNDATAAC-DSSQIASGASDKSVILWEVTTG-QPV 90
S+ I WNP +LL G D+TA + S+ ++G S + V+ + G Q V
Sbjct: 166 SEVFICAWNPVSDLLASGSG-------DSTARIWNLSESSTGGSTQLVLRHCIREGGQDV 218
Query: 91 RRWREHASKVTCVKFNEDSSVVISGSQDNTVMMW 124
++ VT + +N + +++ +GS D +W
Sbjct: 219 PSNKD----VTSLDWNSEGTLLATGSYDGFARIW 248
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 176 (67.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 56/244 (22%), Positives = 102/244 (41%)
Query: 16 IRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGAS 75
+R V + Y +CG DK++K W+ N +++ Y GH V + + +
Sbjct: 249 VRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSR 308
Query: 76 DKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDV---KSR--- 129
D + +W+V T V H + V V+ +I+GS D T+ +WD+ K+R
Sbjct: 309 DSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLVAGKTRVTL 368
Query: 130 SHHP--IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCSHPTRK 187
++H ++ + F S I +W+ D S I L S A++N+L +
Sbjct: 369 TNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNL--SGHNAIINTLTVNSDGV 426
Query: 188 HIMSACGNNVKLWTAEEDYGQEPIVDACF--TRDCQC-ILTCSTDEC-LRLFDKATGELL 243
+ A + LW Y + + A + D + I C+ D+ RL + +
Sbjct: 427 LVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTAEADKTI 486
Query: 244 EEYK 247
+ Y+
Sbjct: 487 KVYR 490
Score = 175 (66.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 59/245 (24%), Positives = 103/245 (42%)
Query: 14 GAIRAVRFNVDGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASG 73
G +R + + +T +D+ IK+W+ L + GH V + S + S
Sbjct: 205 GWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSC 264
Query: 74 ASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVVISGSQDNTVMMWDVKSRS--H 131
DK V W++ + +R + H S V + + V+++ S+D+T +WDV++++ H
Sbjct: 265 GEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVH 324
Query: 132 ----HP-----IQCCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNSLCS 182
H ++C + + QI GS D I W LV TL + K V ++
Sbjct: 325 TLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRAVVL 380
Query: 183 HPTRKHIMSACGNNVKLWTAEEDY------GQEPIVDACFTRDCQCILTCSTDE-CLRLF 235
HP S +N+K W + G I++ T + +L D + L+
Sbjct: 381 HPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINT-LTVNSDGVLVSGADNGTMHLW 439
Query: 236 DKATG 240
D TG
Sbjct: 440 DWRTG 444
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/201 (26%), Positives = 81/201 (40%)
Query: 134 IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSS-QISTLIH-SVGKAVVNSLCSHPTRKHIM 190
++C +Q F GS+D I W L ++S H S + V+ S TR +
Sbjct: 207 VRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVIVS-----TRSPYL 261
Query: 191 SACGNN--VKLWTAEEDY---GQEPIVDACFTRDCQ----CILTCSTDECLRLFDKATGE 241
+CG + VK W E + + A + D ++TCS D R++D T
Sbjct: 262 FSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRTKA 321
Query: 242 LLEEYKGHKSGDFRIECCLDSKDSQIFCGSSDGKIYKWQLVDSSQISTLIHSVGKAVVNS 301
+ GH + + C + + QI GS D I W LV TL + K V +
Sbjct: 322 SVHTLSGHTNAVATVRC--QAAEPQIITGSHDTTIRLWDLVAGKTRVTLTNH--KKSVRA 377
Query: 302 LCSHPTRKHIMSACGNNVKLW 322
+ HP S +N+K W
Sbjct: 378 VVLHPRHYTFASGSPDNIKQW 398
>UNIPROTKB|D6RFX4 [details] [associations]
symbol:GNB2L1 "Guanine nucleotide-binding protein subunit
beta-2-like 1" species:9606 "Homo sapiens" [GO:0008200 "ion channel
inhibitor activity" evidence=IEA] [GO:0015935 "small ribosomal
subunit" evidence=IEA] [GO:0017148 "negative regulation of
translation" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0090003
"regulation of establishment of protein localization to plasma
membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0017148 GO:GO:0043025 GO:GO:0030425
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008200
HOGENOM:HOG000091643 ChiTaRS:GNB2L1 HGNC:HGNC:4399 GO:GO:0015935
EMBL:AC008443 IPI:IPI00966041 ProteinModelPortal:D6RFX4 SMR:D6RFX4
Ensembl:ENST00000507000 UCSC:uc010jls.3 ArrayExpress:D6RFX4
Bgee:D6RFX4 Uniprot:D6RFX4
Length = 194
Score = 154 (59.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 53 GHAHEVNDATAACDSSQIASGASDKSVILWEVTTGQPVRRWREHASKVTCVKFNEDSSVV 112
GH+H V+D + D SG+ D ++ LW++TTG RR+ H V V F+ D+ +
Sbjct: 20 GHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQI 79
Query: 113 ISGSQDNTVMMWD--------VKSRSHHP-IQCCLDSKDSQ----IFCGSSDGKIYKWQL 159
+SGS+D T+ +W+ V+ SH + C S +S + CG D + W L
Sbjct: 80 VSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW-DKLVKVWNL 138
Query: 160 VD 161
+
Sbjct: 139 AN 140
Score = 153 (58.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 42/158 (26%), Positives = 76/158 (48%)
Query: 24 DGSYCLTCGSDKKIKLWNPYRNLLLKTYGGHAHEVNDATAACDSSQIASGASDKSVILWE 83
DG + L+ D ++LW+ + + GH +V + D+ QI SG+ DK++ LW
Sbjct: 33 DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWN 92
Query: 84 VTTG--QPVRRWREHASKVTCVKFNEDSS--VVISGSQDNTVMMWDV---KSRSHHP--- 133
T G + + H+ V+CV+F+ +SS +++S D V +W++ K +++H
Sbjct: 93 -TLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 151
Query: 134 --IQCCLDSKDSQIFC-GSSDGKIYKWQLVDSSQISTL 168
+ S D + G DG+ W L + + TL
Sbjct: 152 GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 189
Score = 121 (47.7 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 16 IRAVRFNVDGS--YCLTCGSDKKIKLWNPYRNLLLKT-YGGHAHEVNDATAACDSSQIAS 72
+ VRF+ + S ++CG DK +K+WN N LKT + GH +N T + D S AS
Sbjct: 110 VSCVRFSPNSSNPIIVSCGWDKLVKVWN-LANCKLKTNHIGHTGYLNTVTVSPDGSLCAS 168
Query: 73 GASDKSVILWEVTTGQ 88
G D +LW++ G+
Sbjct: 169 GGKDGQAMLWDLNEGK 184
WARNING: HSPs involving 889 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.131 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 341 341 0.00095 116 3 11 22 0.39 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1139
No. of states in DFA: 617 (66 KB)
Total size of DFA: 271 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.96u 0.10s 29.06t Elapsed: 00:00:05
Total cpu time: 29.13u 0.10s 29.23t Elapsed: 00:00:07
Start: Thu Aug 15 16:08:28 2013 End: Thu Aug 15 16:08:35 2013
WARNINGS ISSUED: 2