Query psy17864
Match_columns 151
No_of_seqs 34 out of 36
Neff 2.3
Searched_HMMs 46136
Date Sat Aug 17 00:58:33 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17864.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/17864hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14954 LIX1: Limb expression 100.0 9E-89 1.9E-93 566.6 12.0 144 1-144 93-252 (252)
2 PF10127 Nuc-transf: Predicted 58.2 28 0.0006 27.9 5.3 73 56-128 107-205 (247)
3 PF12645 HTH_16: Helix-turn-he 42.4 36 0.00078 23.2 3.1 17 80-96 42-58 (65)
4 PF04046 PSP: PSP; InterPro: 38.8 16 0.00035 24.6 0.9 12 103-114 2-13 (48)
5 COG1705 FlgJ Muramidase (flage 37.9 20 0.00043 30.2 1.6 34 15-55 44-84 (201)
6 smart00581 PSP proline-rich do 36.1 18 0.0004 24.9 0.9 13 102-114 5-17 (54)
7 PRK14702 insertion element IS2 32.4 48 0.001 27.2 3.0 22 8-29 122-144 (262)
8 PF14410 GH-E: HNH/ENDO VII su 32.3 38 0.00083 23.6 2.0 25 54-79 27-51 (70)
9 PF00627 UBA: UBA/TS-N domain; 31.9 1E+02 0.0022 18.2 3.6 33 60-96 5-37 (37)
10 smart00047 LYZ2 Lysozyme subfa 30.0 37 0.0008 26.0 1.8 36 13-55 7-49 (147)
11 PF13060 DUF3921: Protein of u 28.3 1.1E+02 0.0023 21.6 3.7 29 92-120 16-44 (58)
12 PF11202 PRTase_1: Phosphoribo 28.3 40 0.00087 29.5 1.9 45 75-119 117-172 (257)
13 PF08006 DUF1700: Protein of u 26.0 1.1E+02 0.0023 23.5 3.7 49 70-120 21-69 (181)
14 PF10835 DUF2573: Protein of u 25.4 19 0.00041 26.9 -0.5 21 42-62 33-56 (82)
15 PRK03717 ribonuclease P protei 24.9 76 0.0016 24.0 2.7 26 12-37 28-53 (120)
16 PF10771 DUF2582: Protein of u 23.4 43 0.00092 23.3 1.0 12 89-100 39-50 (65)
17 PRK11519 tyrosine kinase; Prov 23.3 2.6E+02 0.0055 26.4 6.3 57 73-132 248-305 (719)
18 COG0049 RpsG Ribosomal protein 22.9 2.7E+02 0.0059 22.6 5.6 63 77-142 84-146 (148)
19 PF15500 Toxin_39: Putative RN 22.8 1.8E+02 0.0039 22.4 4.3 52 42-127 37-89 (96)
20 PF13788 DUF4180: Domain of un 21.0 37 0.0008 26.0 0.3 46 8-53 41-100 (113)
No 1
>PF14954 LIX1: Limb expression 1
Probab=100.00 E-value=9e-89 Score=566.63 Aligned_cols=144 Identities=68% Similarity=1.000 Sum_probs=142.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHhcccCccccc--Ccch---hhhhhccccchhHH-----------hhhchHHHH
Q psy17864 1 MNSVFNEHPSRRISDDFIEKAVAEARASFKVSFKFQV--NSGL---NLDVTSTIGKKLAT-----------YWNGSLKAM 64 (151)
Q Consensus 1 mNSvfNEhPsRrIt~eFi~ksv~eA~~s~~g~~~d~~--~t~i---~~mLesn~GktmLE-----------HWNGSLKAm 64 (151)
||||||||||||||+|||+|+|+||++||+|+++|++ |||| +||||+|+|||||| |||||||||
T Consensus 93 mNSvfNEhPsRrIt~eFi~ksv~eA~~s~~~~~~~~~~p~t~igaf~~mLesn~GrtMLEFQElMTVFQLLHWNGSLKAm 172 (252)
T PF14954_consen 93 MNSVFNEHPSRRITDEFIEKSVQEAVASFSGKLEDADDPSTSIGAFRFMLESNKGRTMLEFQELMTVFQLLHWNGSLKAM 172 (252)
T ss_pred HHHHHhcCCcccccHHHHHHHHHHHHHhcCCCcccccCCcchHHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcchHHHH
Confidence 8999999999999999999999999999999999998 8999 99999999999999 999999999
Q ss_pred HhhhhhHHHHHHHhhcccccHHHHHHhHHhHHHhhhcCCCchHHHHHHHHHHHHHHHhccccccCchhhHHHHHHHHhhh
Q psy17864 65 RERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHTQI 144 (151)
Q Consensus 65 REr~CSRQEViahYS~r~LD~~mRsqMALDWi~rE~~~pG~i~~EL~~a~rELe~aR~aGrELRF~KEKkdIL~LA~~q~ 144 (151)
|||+|||||||||||||+||||||||||||||+|||++||+|++||++|++||++||++||||||||||||||+||++|+
T Consensus 173 Rer~CSRQeViahYs~r~LD~~mRsqMALDWi~rE~~~pG~i~~EL~~A~~ELe~aR~aGrELRF~KEKkdIL~LA~sq~ 252 (252)
T PF14954_consen 173 RERQCSRQEVIAHYSQRSLDDDMRSQMALDWIAREQESPGIISQELQVAERELEEARLAGRELRFYKEKKDILSLALSQL 252 (252)
T ss_pred HHccccHHHHHHHHHhcchhHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHhccccccchhHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999996
No 2
>PF10127 Nuc-transf: Predicted nucleotidyltransferase; InterPro: IPR018775 Proteins in this entry are predicted to catalyse the transfer of nucleotide residues from nucleoside diphosphates or triphosphates into dimer or polymer forms.
Probab=58.17 E-value=28 Score=27.91 Aligned_cols=73 Identities=25% Similarity=0.337 Sum_probs=50.8
Q ss_pred hhhchHHHHHhhhhhHHHHHHHhhccc-------ccH----------HHHHHhHHhHHHhhhcCCCch---------HHH
Q psy17864 56 YWNGSLKAMRERQCSRQEVVAHYSNRA-------LDD----------DMRSQMALDWIAREQENPGAL---------GRE 109 (151)
Q Consensus 56 HWNGSLKAmREr~CSRQEViahYS~r~-------LD~----------~mRsqMALDWi~rE~~~pG~i---------~~E 109 (151)
.|=+.++.+-...++.+-++.||...+ +.+ -+|.-+|..||.+..+.|-+. ..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~y~g~ak~q~~k~~~~~~~~~K~~~y~lR~lla~~~i~~~~~~pPm~f~~l~~~~~~~~ 186 (247)
T PF10127_consen 107 DFLGELLQLAREYFSSKALAHHYLGYAKSQLRKYLKGEEVKLKKYFYALRLLLAARWILETGEIPPMEFEELLEELNDDD 186 (247)
T ss_pred cHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhcccCcccHHHHHHHHHHHHHHHHHHhcCCCCCccHHHHHHhccchh
Confidence 455677777777777777888886322 222 368899999999999877765 334
Q ss_pred HHHHHHHHHHHHhcccccc
Q psy17864 110 LDQAERELETARLAGRELR 128 (151)
Q Consensus 110 L~~a~rELe~aR~aGrELR 128 (151)
+...-.+|-..+..|.|.-
T Consensus 187 ~~~~i~~Ll~~K~~~~e~~ 205 (247)
T PF10127_consen 187 LREEIDELLEIKKGGDEKE 205 (247)
T ss_pred HHHHHHHHHHHHcCCCchh
Confidence 4455557888888887753
No 3
>PF12645 HTH_16: Helix-turn-helix domain; InterPro: IPR024760 This domain appears to be a helix-turn-helix domain, suggesting a transcriptional regulatory protein. Some proteins with this domain are annotated as conjugative transposon proteins.
Probab=42.39 E-value=36 Score=23.22 Aligned_cols=17 Identities=18% Similarity=0.509 Sum_probs=11.3
Q ss_pred cccccHHHHHHhHHhHH
Q psy17864 80 NRALDDDMRSQMALDWI 96 (151)
Q Consensus 80 ~r~LD~~mRsqMALDWi 96 (151)
+..+|+|||..+...-|
T Consensus 42 ~~~vDedl~q~l~~kLi 58 (65)
T PF12645_consen 42 YGYVDEDLKQRLEIKLI 58 (65)
T ss_pred CceeCHHHHHHHHHHHH
Confidence 34578888887765444
No 4
>PF04046 PSP: PSP; InterPro: IPR006568 PSP is a proline-rich domain of unknown function found in spliceosome associated proteins.
Probab=38.78 E-value=16 Score=24.58 Aligned_cols=12 Identities=50% Similarity=0.736 Sum_probs=10.7
Q ss_pred CCchHHHHHHHH
Q psy17864 103 PGALGRELDQAE 114 (151)
Q Consensus 103 pG~i~~EL~~a~ 114 (151)
||.||.||..|.
T Consensus 2 PG~lS~~LR~AL 13 (48)
T PF04046_consen 2 PGKLSDELREAL 13 (48)
T ss_pred CcccCHHHHHHc
Confidence 999999998874
No 5
>COG1705 FlgJ Muramidase (flagellum-specific) [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=37.89 E-value=20 Score=30.15 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHhcccCcccccCcch-------hhhhhccccchhHH
Q psy17864 15 DDFIEKAVAEARASFKVSFKFQVNSGL-------NLDVTSTIGKKLAT 55 (151)
Q Consensus 15 ~eFi~ksv~eA~~s~~g~~~d~~~t~i-------~~mLesn~GktmLE 55 (151)
..||.+....|...- ...|| .-.|||+-|+++|-
T Consensus 44 ~~Fi~~i~~~A~~~~-------~~~gi~~Si~iAQAiLESgwGks~l~ 84 (201)
T COG1705 44 QAFIDKIAPAAQPLA-------QEYGILPSITIAQAILESGWGKSELA 84 (201)
T ss_pred HHHHHHHHHHHHHHH-------HHhCCCHHHHHHHHHHHcCCcchhhc
Confidence 459988877766522 13444 66799999999998
No 6
>smart00581 PSP proline-rich domain in spliceosome associated proteins.
Probab=36.14 E-value=18 Score=24.91 Aligned_cols=13 Identities=38% Similarity=0.664 Sum_probs=11.4
Q ss_pred CCCchHHHHHHHH
Q psy17864 102 NPGALGRELDQAE 114 (151)
Q Consensus 102 ~pG~i~~EL~~a~ 114 (151)
.||.||+||+.|.
T Consensus 5 kPG~lS~~LR~AL 17 (54)
T smart00581 5 KPGRISDELREAL 17 (54)
T ss_pred cCCcCCHHHHHHc
Confidence 4999999999885
No 7
>PRK14702 insertion element IS2 transposase InsD; Provisional
Probab=32.43 E-value=48 Score=27.23 Aligned_cols=22 Identities=5% Similarity=0.042 Sum_probs=16.1
Q ss_pred CCCCC-CCHHHHHHHHHHHHHhc
Q psy17864 8 HPSRR-ISDDFIEKAVAEARASF 29 (151)
Q Consensus 8 hPsRr-It~eFi~ksv~eA~~s~ 29 (151)
+.+.. .+.+.+.+++..|+...
T Consensus 122 ~is~~~~~~~~v~~~l~~A~~~~ 144 (262)
T PRK14702 122 AVTTGGFNSETVQDVMLGAVERR 144 (262)
T ss_pred EeccCcCCHHHHHHHHHHHHHHH
Confidence 34443 67889999999888764
No 8
>PF14410 GH-E: HNH/ENDO VII superfamily nuclease with conserved GHE residues
Probab=32.30 E-value=38 Score=23.57 Aligned_cols=25 Identities=28% Similarity=0.493 Sum_probs=20.9
Q ss_pred HHhhhchHHHHHhhhhhHHHHHHHhh
Q psy17864 54 ATYWNGSLKAMRERQCSRQEVVAHYS 79 (151)
Q Consensus 54 LEHWNGSLKAmREr~CSRQEViahYS 79 (151)
-||||-..+|+ +..-+++||+++|.
T Consensus 27 ~e~~~~~~~~~-~~~~t~ke~~d~~n 51 (70)
T PF14410_consen 27 VEYWRLVGRAE-EGGITRKEFLDWYN 51 (70)
T ss_pred HHHHHHHHHHH-hcCCCHHHHHHHHh
Confidence 45899877765 58899999999998
No 9
>PF00627 UBA: UBA/TS-N domain; InterPro: IPR000449 UBA domains are a commonly occurring sequence motif of approximately 45 amino acid residues that are found in diverse proteins involved in the ubiquitin/proteasome pathway, DNA excision-repair, and cell signalling via protein kinases []. The human homologue of yeast Rad23A is one example of a nucleotide excision-repair protein that contains both an internal and a C-terminal UBA domain. The solution structure of human Rad23A UBA(2) showed that the domain forms a compact three-helix bundle []. Comparison of the structures of UBA(1) and UBA(2) reveals that both form very similar folds and have a conserved large hydrophobic surface patch which may be a common protein-interacting surface present in diverse UBA domains. Evidence that ubiquitin binds to UBA domains leads to the prediction that the hydrophobic surface patch of UBA domains interacts with the hydrophobic surface on the five-stranded beta-sheet of ubiquitin []. This domain is similar in sequence to the N-terminal domain of translation elongation factor EF1B (or EF-Ts) from bacteria, mitochondria and chloroplasts. More information about EF1B (EF-Ts) proteins can be found at Protein of the Month: Elongation Factors [].; GO: 0005515 protein binding; PDB: 2DAI_A 2OO9_C 2JUJ_A 1WHC_A 1YLA_A 2O25_B 3K9O_A 3K9P_A 3F92_A 3E46_A ....
Probab=31.89 E-value=1e+02 Score=18.22 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=22.6
Q ss_pred hHHHHHhhhhhHHHHHHHhhcccccHHHHHHhHHhHH
Q psy17864 60 SLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWI 96 (151)
Q Consensus 60 SLKAmREr~CSRQEViahYS~r~LD~~mRsqMALDWi 96 (151)
.++.|++..+++..++.......=|- ..|++|+
T Consensus 5 ~v~~L~~mGf~~~~~~~AL~~~~~nv----e~A~~~L 37 (37)
T PF00627_consen 5 KVQQLMEMGFSREQAREALRACNGNV----ERAVDWL 37 (37)
T ss_dssp HHHHHHHHTS-HHHHHHHHHHTTTSH----HHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHcCCCH----HHHHHhC
Confidence 46778888999999887765544343 3577775
No 10
>smart00047 LYZ2 Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
Probab=30.04 E-value=37 Score=26.05 Aligned_cols=36 Identities=19% Similarity=0.330 Sum_probs=28.1
Q ss_pred CCHHHHHHHHHHHHHhcccCcccccCcch-------hhhhhccccchhHH
Q psy17864 13 ISDDFIEKAVAEARASFKVSFKFQVNSGL-------NLDVTSTIGKKLAT 55 (151)
Q Consensus 13 It~eFi~ksv~eA~~s~~g~~~d~~~t~i-------~~mLesn~GktmLE 55 (151)
=+.+||.+.+..|....+ ..|| .-.|||.-|++.|-
T Consensus 7 s~~~fi~~~~~~A~~~~~-------~~gi~~Sv~iAQAiLESgwG~S~La 49 (147)
T smart00047 7 STLEFVGKIFNEAQKAYQ-------INGVYPSILIAQAALESGWGTSKLA 49 (147)
T ss_pred CHHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHHHHcCCCCCCcc
Confidence 356899999999888543 3334 77899999999985
No 11
>PF13060 DUF3921: Protein of unknown function (DUF3921)
Probab=28.30 E-value=1.1e+02 Score=21.57 Aligned_cols=29 Identities=24% Similarity=0.414 Sum_probs=25.1
Q ss_pred HHhHHHhhhcCCCchHHHHHHHHHHHHHH
Q psy17864 92 ALDWIAREQENPGALGRELDQAERELETA 120 (151)
Q Consensus 92 ALDWi~rE~~~pG~i~~EL~~a~rELe~a 120 (151)
..|=+.+|-...|++..|++.|+.|--.|
T Consensus 16 tydelgkei~~~g~~~d~i~kaqeeylsa 44 (58)
T PF13060_consen 16 TYDELGKEIDLQGVIADEIQKAQEEYLSA 44 (58)
T ss_pred hHHHHhHHhhhcchHHHHHHHHHHHHHHH
Confidence 45778999999999999999999887655
No 12
>PF11202 PRTase_1: Phosphoribosyl transferase (PRTase); InterPro: IPR011215 This is a family of uncharacterised bacterial proteins.
Probab=28.28 E-value=40 Score=29.49 Aligned_cols=45 Identities=29% Similarity=0.407 Sum_probs=33.9
Q ss_pred HHHhhcccccHHHHHHhHHhHHHhhhcC-----------CCchHHHHHHHHHHHHH
Q psy17864 75 VAHYSNRALDDDMRSQMALDWIAREQEN-----------PGALGRELDQAERELET 119 (151)
Q Consensus 75 iahYS~r~LD~~mRsqMALDWi~rE~~~-----------pG~i~~EL~~a~rELe~ 119 (151)
+.|||=-.+-|.==..-||+||...+.. -|.|.+||..|-++...
T Consensus 117 ~~HYsISIIRdRGID~~AL~~I~~~H~~~~ivFVDGWTGKGaI~~eL~~al~~~~~ 172 (257)
T PF11202_consen 117 LPHYSISIIRDRGIDENALRYILARHPPESIVFVDGWTGKGAITRELKKALAAFNA 172 (257)
T ss_pred CCceeEEEecCCCCCHHHHHHHHHhCCCcceEEEecCccccHHHHHHHHHHHHHHh
Confidence 5799865555444456799999887754 48999999999877654
No 13
>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT).
Probab=26.03 E-value=1.1e+02 Score=23.48 Aligned_cols=49 Identities=20% Similarity=0.281 Sum_probs=34.1
Q ss_pred hHHHHHHHhhcccccHHHHHHhHHhHHHhhhcCCCchHHHHHHHHHHHHHH
Q psy17864 70 SRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETA 120 (151)
Q Consensus 70 SRQEViahYS~r~LD~~mRsqMALDWi~rE~~~pG~i~~EL~~a~rELe~a 120 (151)
.|+|+++||...- ||.+..-..=+=|-.|-.+|--+.+|+.... .++..
T Consensus 21 e~~e~l~~Y~e~f-~d~~~~G~sEeeii~~LG~P~~iA~~i~~~~-~i~~~ 69 (181)
T PF08006_consen 21 EREEILEYYEEYF-DDAGEEGKSEEEIIAELGSPKEIAREILAEY-SIKEE 69 (181)
T ss_pred HHHHHHHHHHHHH-HHhhhCCCCHHHHHHHcCCHHHHHHHHHHhh-hhhhh
Confidence 5899999998764 5555444444566777778999999987543 44544
No 14
>PF10835 DUF2573: Protein of unknown function (DUF2573); InterPro: IPR020393 This entry contains proteins with no known function.
Probab=25.42 E-value=19 Score=26.95 Aligned_cols=21 Identities=29% Similarity=0.569 Sum_probs=17.5
Q ss_pred hhhhhccccchhHH---hhhchHH
Q psy17864 42 NLDVTSTIGKKLAT---YWNGSLK 62 (151)
Q Consensus 42 ~~mLesn~GktmLE---HWNGSLK 62 (151)
.+.|=+++.|||=- ||||+--
T Consensus 33 ~W~lYshiaKsMPpL~kHWN~~~P 56 (82)
T PF10835_consen 33 QWALYSHIAKSMPPLAKHWNGTYP 56 (82)
T ss_pred HHHHHHHHHHhCcHHHHhhcccCc
Confidence 78888999999965 9999843
No 15
>PRK03717 ribonuclease P protein component 2; Provisional
Probab=24.94 E-value=76 Score=23.97 Aligned_cols=26 Identities=27% Similarity=0.119 Sum_probs=22.4
Q ss_pred CCCHHHHHHHHHHHHHhcccCccccc
Q psy17864 12 RISDDFIEKAVAEARASFKVSFKFQV 37 (151)
Q Consensus 12 rIt~eFi~ksv~eA~~s~~g~~~d~~ 37 (151)
.+|++.|.++|.+|+.+.-|+..-+.
T Consensus 28 ~~~~~~l~~~Ir~av~~~fGd~G~~~ 53 (120)
T PRK03717 28 PFTKDEIKKAIWEASLSTLGELGTAR 53 (120)
T ss_pred CCCHHHHHHHHHHHHHHHcChhhhcc
Confidence 48999999999999999988776654
No 16
>PF10771 DUF2582: Protein of unknown function (DUF2582); InterPro: IPR019707 This entry represents conserved proteins found in bacteria and archaea. The function is not known. ; PDB: 2L02_B 2L01_A.
Probab=23.39 E-value=43 Score=23.35 Aligned_cols=12 Identities=42% Similarity=0.938 Sum_probs=10.4
Q ss_pred HHhHHhHHHhhh
Q psy17864 89 SQMALDWIAREQ 100 (151)
Q Consensus 89 sqMALDWi~rE~ 100 (151)
-.+|+-|++||-
T Consensus 39 ~~~AiGWLarE~ 50 (65)
T PF10771_consen 39 VYLAIGWLAREN 50 (65)
T ss_dssp HHHHHHHHHCTT
T ss_pred HHHHHHHHhccC
Confidence 479999999985
No 17
>PRK11519 tyrosine kinase; Provisional
Probab=23.33 E-value=2.6e+02 Score=26.38 Aligned_cols=57 Identities=19% Similarity=0.370 Sum_probs=42.5
Q ss_pred HHHHHhhcccccHHHH-HHhHHhHHHhhhcCCCchHHHHHHHHHHHHHHHhccccccCchh
Q psy17864 73 EVVAHYSNRALDDDMR-SQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKE 132 (151)
Q Consensus 73 EViahYS~r~LD~~mR-sqMALDWi~rE~~~pG~i~~EL~~a~rELe~aR~aGrELRF~KE 132 (151)
.+..-|-+..++...+ .+-+++||...- ..+.++|..||++|+.-|..-.-+-...|
T Consensus 248 ~l~~~Yi~~~~~~k~~~a~~a~~fL~~ql---~~l~~~L~~aE~~l~~fr~~~~~vd~~~e 305 (719)
T PRK11519 248 SITRNYLEQNIERKSEEASKSLAFLAQQL---PEVRSRLDVAENKLNAFRQDKDSVDLPLE 305 (719)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCCchHH
Confidence 4566777777776554 457999998865 46889999999999999887655544443
No 18
>COG0049 RpsG Ribosomal protein S7 [Translation, ribosomal structure and biogenesis]
Probab=22.92 E-value=2.7e+02 Score=22.57 Aligned_cols=63 Identities=19% Similarity=0.193 Sum_probs=48.1
Q ss_pred HhhcccccHHHHHHhHHhHHHhhhcCCCchHHHHHHHHHHHHHHHhccccccCchhhHHHHHHHHh
Q psy17864 77 HYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETARLAGRELRFPKEKKDILMLAHT 142 (151)
Q Consensus 77 hYS~r~LD~~mRsqMALDWi~rE~~~pG~i~~EL~~a~rELe~aR~aGrELRF~KEKkdIL~LA~~ 142 (151)
|.-.--+.+.-|...||-||...-...+--+-+..+|..=++.|...| -=+|-|.|+=-+|.+
T Consensus 84 yqvpVeV~p~RR~~lAlrwi~~~Ar~r~~ktm~erLA~Eli~Aan~~g---~AikKked~hRmAeA 146 (148)
T COG0049 84 YQVPVEVRPRRRVALALRWIVEGARKRNEKTMAERLANELIDAANNTG---AAIKKKEDTHRMAEA 146 (148)
T ss_pred eEecCccCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCc---chhhhHHHHHHHHHh
Confidence 444455778899999999998877777878888899997778888888 446777777666643
No 19
>PF15500 Toxin_39: Putative RNase-like toxin
Probab=22.79 E-value=1.8e+02 Score=22.35 Aligned_cols=52 Identities=25% Similarity=0.351 Sum_probs=33.1
Q ss_pred hhhhhccccc-hhHHhhhchHHHHHhhhhhHHHHHHHhhcccccHHHHHHhHHhHHHhhhcCCCchHHHHHHHHHHHHHH
Q psy17864 42 NLDVTSTIGK-KLATYWNGSLKAMRERQCSRQEVVAHYSNRALDDDMRSQMALDWIAREQENPGALGRELDQAERELETA 120 (151)
Q Consensus 42 ~~mLesn~Gk-tmLEHWNGSLKAmREr~CSRQEViahYS~r~LD~~mRsqMALDWi~rE~~~pG~i~~EL~~a~rELe~a 120 (151)
+.|-.-.+|. --|..||.+|.+||...- +.|-| |-+.-.+-||.|
T Consensus 37 ~veYkkel~a~p~lk~wne~vq~~Rk~dp--------------------~~aAd--------------eaakLi~alE~a 82 (96)
T PF15500_consen 37 RVEYKKELAADPALKAWNETVQAKRKLDP--------------------KFAAD--------------EAAKLIQALETA 82 (96)
T ss_pred hHHHHHHhccCHHHHHHHHHHHHHHhhch--------------------hhhHH--------------HHHHHHHHHHHH
Confidence 5555444432 235599999999997532 22333 555566778999
Q ss_pred Hhccccc
Q psy17864 121 RLAGREL 127 (151)
Q Consensus 121 R~aGrEL 127 (151)
|..|-.+
T Consensus 83 r~ngg~a 89 (96)
T PF15500_consen 83 RNNGGTA 89 (96)
T ss_pred HhcCCCC
Confidence 9988654
No 20
>PF13788 DUF4180: Domain of unknown function (DUF4180)
Probab=20.95 E-value=37 Score=26.04 Aligned_cols=46 Identities=22% Similarity=0.346 Sum_probs=29.4
Q ss_pred CCCCCCCHHHHHHH---HHHHHHhc---------ccCcccc-cCcch-hhhhhccccchh
Q psy17864 8 HPSRRISDDFIEKA---VAEARASF---------KVSFKFQ-VNSGL-NLDVTSTIGKKL 53 (151)
Q Consensus 8 hPsRrIt~eFi~ks---v~eA~~s~---------~g~~~d~-~~t~i-~~mLesn~Gktm 53 (151)
.|..+||++|..=. ..|-...| -|++... .|.++ -|+.|||+|++.
T Consensus 41 l~~~~l~~dFF~L~TglAGeiLQKf~NY~iklAivGD~s~~~~S~~l~dfi~EsN~G~~~ 100 (113)
T PF13788_consen 41 LPKEALSEDFFDLRTGLAGEILQKFVNYRIKLAIVGDFSAYATSKSLRDFIYESNRGNHF 100 (113)
T ss_pred EEhHHCCHHHHHhhcchHHHHHHHHHhhceeEEEEEcccccccchhHHHHHHHhcCCCeE
Confidence 35667888887532 22222222 3455555 58888 899999999874
Done!