AmiGO: BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>psy17867
MNVFLLQGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRER
QCSRQEVVAHYSNRALDDDMR
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with LIX1L LIX1L LIX1L LIX1L protein	protein from Bos taurus	2.3e-32
BLAST match view associations BLAST with LIX1L LIX1L LIX1L LIX1-like protein	protein from Homo sapiens	2.3e-32
BLAST match view associations BLAST with Lix1l Lix1l Lix1l Lix1-like	protein from Mus musculus	2.3e-32
BLAST match view associations BLAST with Lix1l Lix1l Lix1l Lix1 homolog (mouse)-like	gene from Rattus norvegicus	2.3e-32
BLAST match view associations BLAST with lft lft lft lowfat	protein from Drosophila melanogaster	2.4e-28
BLAST match view associations BLAST with Lix1 Lix1 Lix1 limb expression 1 homolog (chicken)	protein from Mus musculus	2.6e-24
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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy17867
        (81 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|A2VE91 - symbol:LIX1L "Uncharacterized protein"...   354  2.3e-32   1
UNIPROTKB|Q8IVB5 - symbol:LIX1L "LIX1-like protein" speci...   354  2.3e-32   1
MGI|MGI:3036267 - symbol:Lix1l "Lix1-like" species:10090 ...   354  2.3e-32   1
RGD|1593161 - symbol:Lix1l "Lix1 homolog (mouse)-like" sp...   354  2.3e-32   1
FB|FBgn0032230 - symbol:lft "lowfat" species:7227 "Drosop...   316  2.4e-28   1
MGI|MGI:1913893 - symbol:Lix1 "limb expression 1 homolog ...   278  2.6e-24   1


>UNIPROTKB|A2VE91 [details] [associations]
            symbol:LIX1L "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] CTD:128077 eggNOG:NOG77587 HOGENOM:HOG000237359
            HOVERGEN:HBG079509 KO:K16673 OMA:QMALDWI OrthoDB:EOG4WWRK6
            GeneTree:ENSGT00390000005869 EMBL:DAAA02007322 EMBL:DAAA02007323
            EMBL:DAAA02007324 EMBL:BC133629 IPI:IPI00696388
            RefSeq:NP_001075944.1 UniGene:Bt.23622 Ensembl:ENSBTAT00000011015
            GeneID:788858 KEGG:bta:788858 InParanoid:A2VE91 NextBio:20929356
            Uniprot:A2VE91
        Length = 337

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   260 LAHYSHRALDDDIR 273


>UNIPROTKB|Q8IVB5 [details] [associations]
            symbol:LIX1L "LIX1-like protein" species:9606 "Homo
            sapiens" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] EMBL:BC035727 EMBL:CR627381 IPI:IPI00216973
            RefSeq:NP_714924.1 RefSeq:XP_003960228.1 UniGene:Hs.740619
            ProteinModelPortal:Q8IVB5 IntAct:Q8IVB5 PhosphoSite:Q8IVB5
            DMDM:74728055 PaxDb:Q8IVB5 PRIDE:Q8IVB5 Ensembl:ENST00000369308
            GeneID:101060547 GeneID:128077 KEGG:hsa:101060547 KEGG:hsa:128077
            UCSC:uc001enr.3 CTD:128077 GeneCards:GC01P145477 H-InvDB:HIX0023573
            HGNC:HGNC:28715 HPA:HPA046996 neXtProt:NX_Q8IVB5
            PharmGKB:PA134915428 eggNOG:NOG77587 HOGENOM:HOG000237359
            HOVERGEN:HBG079509 InParanoid:Q8IVB5 KO:K16673 OMA:QMALDWI
            OrthoDB:EOG4WWRK6 PhylomeDB:Q8IVB5 GenomeRNAi:128077 NextBio:82220
            ArrayExpress:Q8IVB5 Bgee:Q8IVB5 CleanEx:HS_LIX1L
            Genevestigator:Q8IVB5 GermOnline:ENSG00000152022 Uniprot:Q8IVB5
        Length = 337

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   260 LAHYSHRALDDDIR 273


>MGI|MGI:3036267 [details] [associations]
            symbol:Lix1l "Lix1-like" species:10090 "Mus musculus"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] MGI:MGI:3036267 CTD:128077 eggNOG:NOG77587
            HOGENOM:HOG000237359 HOVERGEN:HBG079509 KO:K16673 OrthoDB:EOG4WWRK6
            EMBL:AK051276 IPI:IPI00380103 RefSeq:NP_001156642.1
            UniGene:Mm.482147 PRIDE:Q8BQ89 GeneID:280411 KEGG:mmu:280411
            UCSC:uc008qnh.1 InParanoid:Q8BQ89 ChiTaRS:LIX1L NextBio:394054
            Genevestigator:Q8BQ89 GermOnline:ENSMUSG00000049288 Uniprot:Q8BQ89
        Length = 337

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   200 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 259

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   260 LAHYSHRALDDDIR 273


>RGD|1593161 [details] [associations]
            symbol:Lix1l "Lix1 homolog (mouse)-like" species:10116 "Rattus
            norvegicus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] RGD:1593161 CTD:128077
            eggNOG:NOG77587 HOGENOM:HOG000237359 HOVERGEN:HBG079509 KO:K16673
            OrthoDB:EOG4WWRK6 EMBL:BC087077 IPI:IPI00393705
            RefSeq:NP_001019474.1 UniGene:Rn.3632 GeneID:499677 KEGG:rno:499677
            UCSC:RGD:1593161 NextBio:703663 ArrayExpress:Q5PQQ7
            Genevestigator:Q5PQQ7 GermOnline:ENSRNOG00000021213 Uniprot:Q5PQQ7
        Length = 338

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/74 (89%), Positives = 72/74 (97%)

Query:     8 GEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 67
             G  EEADNPNTGIGAFRFMLE+NKG++MLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV
Sbjct:   201 GNREEADNPNTGIGAFRFMLESNKGKSMLEFQELMTVFQLLHWNGSLKAMRERQCSRQEV 260

Query:    68 VAHYSNRALDDDMR 81
             +AHYS+RALDDD+R
Sbjct:   261 LAHYSHRALDDDIR 274


>FB|FBgn0032230 [details] [associations]
            symbol:lft "lowfat" species:7227 "Drosophila melanogaster"
            [GO:0035003 "subapical complex" evidence=IDA] [GO:0007476 "imaginal
            disc-derived wing morphogenesis" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] GO:GO:0005737 EMBL:AE014134 GO:GO:0007476
            GO:GO:0035003 eggNOG:NOG77587 KO:K16673 OMA:QMALDWI
            GeneTree:ENSGT00390000005869 EMBL:BT024350 RefSeq:NP_001188775.1
            RefSeq:NP_609390.1 UniGene:Dm.23864 IntAct:Q9VKY1 MINT:MINT-279280
            EnsemblMetazoa:FBtr0080002 EnsemblMetazoa:FBtr0302490 GeneID:34405
            KEGG:dme:Dmel_CG13139 UCSC:CG13139-RA CTD:34405 FlyBase:FBgn0032230
            InParanoid:Q9VKY1 OrthoDB:EOG42RBQ4 GenomeRNAi:34405 NextBio:788344
            Uniprot:Q9VKY1
        Length = 268

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 60/75 (80%), Positives = 66/75 (88%)

Query:     7 QGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQE 66
             +G  +  +   +GIGAFRFMLE NKGRTMLEFQELMTVFQLLHWNGSLKAMRER CSRQE
Sbjct:   126 KGTSQINEGTESGIGAFRFMLEANKGRTMLEFQELMTVFQLLHWNGSLKAMRERHCSRQE 185

Query:    67 VVAHYSNRALDDDMR 81
             VVAHYSNR+LDD+MR
Sbjct:   186 VVAHYSNRSLDDEMR 200


>MGI|MGI:1913893 [details] [associations]
            symbol:Lix1 "limb expression 1 homolog (chicken)"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] MGI:MGI:1913893
            eggNOG:NOG77587 HOGENOM:HOG000237359 HOVERGEN:HBG079509
            EMBL:AF351204 EMBL:AK017685 EMBL:BC063057 EMBL:BC049574
            IPI:IPI00876561 RefSeq:NP_079957.2 UniGene:Mm.268018 STRING:Q6P566
            PhosphoSite:Q6P566 PRIDE:Q6P566 Ensembl:ENSMUST00000115576
            GeneID:66643 KEGG:mmu:66643 UCSC:uc008apg.1 CTD:167410
            GeneTree:ENSGT00390000005869 InParanoid:Q6P566 OMA:LTQICSD
            OrthoDB:EOG444KM6 ChiTaRS:LIX1 NextBio:322257 Bgee:Q6P566
            CleanEx:MM_LIX1 Genevestigator:Q6P566 GermOnline:ENSMUSG00000047786
            Uniprot:Q6P566
        Length = 282

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 48/75 (64%), Positives = 66/75 (88%)

Query:     7 QGEPEEADNPNTGIGAFRFMLETNKGRTMLEFQELMTVFQLLHWNGSLKAMRERQCSRQE 66
             +G  ++AD+P+T +GA+ +MLE+N G+TMLEFQELMT+FQLLHWNGSLKA+RE +CSRQE
Sbjct:   129 RGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQE 188

Query:    67 VVAHYSNRALDDDMR 81
             V+++YS  +LD+ MR
Sbjct:   189 VISYYSQYSLDEKMR 203


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.134   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       81        81   0.00091  102 3  11 22  0.38    29
                                                     29  0.42    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  546 (58 KB)
  Total size of DFA:  104 KB (2071 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.63u 0.11s 8.74t   Elapsed:  00:00:02
  Total cpu time:  8.63u 0.11s 8.74t   Elapsed:  00:00:02
  Start:  Thu Aug 15 16:29:46 2013   End:  Thu Aug 15 16:29:48 2013
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the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
