BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17868
(208 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328713887|ref|XP_001951826.2| PREDICTED: tRNA-dihydrouridine synthase 4-like [Acyrthosiphon
pisum]
Length = 350
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 56/77 (72%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFLHHLVFMCDKLLSSQEKDQLNS 60
M+ARG+L NPGLF+G TP+S +++W+++KH +F+ F HHLVFMC++LL + N
Sbjct: 227 MSARGILHNPGLFAGYQTTPLSAVQDWLNIKHTNFLWFHHHLVFMCERLLPKTARKTFNQ 286
Query: 61 LYSGVEILDFIENKFHV 77
L + +++ F+E++ H+
Sbjct: 287 LRTASDVVSFLEDQLHI 303
>gi|383848070|ref|XP_003699675.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Megachile rotundata]
Length = 349
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 13/120 (10%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV---SMKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARG+L NP LFSG + TP+ CI++W+ S+ F+ F HHLVFM +KLL + +
Sbjct: 224 MAARGILTNPALFSGHSVTPLDCIQDWLDITSVIPTQFLCFHHHLVFMLEKLLPKKSRIF 283
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKGSKYEEESEGKFFQEEMSSVKKQVAKD 117
N+L + +L+F+EN + ++ N SK E + F M K +AKD
Sbjct: 284 FNNLQNKTAVLEFLENTYGIKP---------NNNSKLFEPIKCNFKVPNMKC-NKFIAKD 333
>gi|260818049|ref|XP_002603897.1| hypothetical protein BRAFLDRAFT_129997 [Branchiostoma floridae]
gi|229289221|gb|EEN59908.1| hypothetical protein BRAFLDRAFT_129997 [Branchiostoma floridae]
Length = 347
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARG+L+NPG+++G ++TP+ C+++WV + HF F HHL++M +++ EK
Sbjct: 237 MAARGILQNPGMYAGYDQTPLQCVQDWVDISLKLGTHFTCFHHHLMYMFERVTPKSEKRV 296
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++E + V
Sbjct: 297 FNALTSTAAVLDYLEEHYGV 316
>gi|126340537|ref|XP_001363271.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Monodelphis
domestica]
Length = 317
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + H FM F HHL++M +++ S QEK
Sbjct: 238 MVARGLLANPAMFAGYKETPLKCIWDWVDIALEHGTPFMCFHHHLMYMMERITSKQEKKM 297
Query: 58 LNSLYSGVEILDFIENKF 75
NSL S +LD++ + +
Sbjct: 298 FNSLSSTTAVLDYLTDHY 315
>gi|327273572|ref|XP_003221554.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Anolis
carolinensis]
Length = 325
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ C+++WV + H FM F HHL++M +++ S QEK
Sbjct: 245 MVARGLLANPAMFAGYEETPLECVQDWVHIALEHGTPFMCFHHHLMYMLERITSKQEKKI 304
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
N L S +LD++ + + VQ
Sbjct: 305 FNVLSSTSAVLDYLRDNYGVQ 325
>gi|51513200|gb|AAH80375.1| MGC79829 protein [Xenopus (Silurana) tropicalis]
Length = 308
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +F+G TP++CI++W+ + H F HHL++M +++ S QEK
Sbjct: 228 MAARGLLANPAMFAGYEETPLACIQDWIDITLEHGTPFTCLHHHLIYMMERITSKQEKRV 287
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
N L S +LD++ + + +Q
Sbjct: 288 FNVLSSTSAVLDYLRDHYGIQ 308
>gi|307208699|gb|EFN85989.1| tRNA-dihydrouridine synthase 4-like [Harpegnathos saltator]
Length = 351
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV---SMKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LFSG + TP+ CI++W+ S F F HHLVFM +K+L +++
Sbjct: 224 MSARGILTNPALFSGHSTTPLICIQDWLDIASTIPTEFQCFHHHLVFMLEKVLPKKDRVL 283
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N+L + + +LDF+EN ++++
Sbjct: 284 FNNLQNKLSVLDFLENYYNIRP 305
>gi|89266831|emb|CAJ83965.1| dihydrouridine synthase 4-like (S. cerevisiae) [Xenopus (Silurana)
tropicalis]
Length = 324
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +F+G TP++CI++W+ + H F HHL++M +++ S QEK
Sbjct: 244 MAARGLLANPAMFAGYEETPLACIQDWIDITLEHGTPFTCLHHHLIYMMERITSKQEKRV 303
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
N L S +LD++ + + +Q
Sbjct: 304 FNVLSSTSAVLDYLRDHYGIQ 324
>gi|349501068|ref|NP_001007929.2| tRNA-dihydrouridine synthase 4-like [Xenopus (Silurana) tropicalis]
Length = 315
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +F+G TP++CI++W+ + H F HHL++M +++ S QEK
Sbjct: 235 MAARGLLANPAMFAGYEETPLACIQDWIDITLEHGTPFTCLHHHLIYMMERITSKQEKRV 294
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
N L S +LD++ + + +Q
Sbjct: 295 FNVLSSTSAVLDYLRDHYGIQ 315
>gi|395539169|ref|XP_003771545.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Sarcophilus harrisii]
Length = 317
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + H FM F HHL++M +++ S QEK
Sbjct: 238 MVARGLLANPAMFAGYKETPLKCIWDWVDIALEHGTPFMCFHHHLMYMMERITSKQEKKV 297
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 298 FNALSSTTAVLDYLTDHY 315
>gi|148228148|ref|NP_001089272.1| dihydrouridine synthase 4-like [Xenopus laevis]
gi|58702004|gb|AAH90192.1| MGC85035 protein [Xenopus laevis]
Length = 308
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +F+G TP++CI++WV + H F HHL++M +++ S QEK
Sbjct: 228 MAARGLLANPAMFAGYEETPLACIQDWVDIALEHGTPFTCLHHHLMYMMERITSKQEKRI 287
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
N L S +LD++ + + +Q
Sbjct: 288 FNILSSTSAVLDYLRDHYEIQ 308
>gi|350423981|ref|XP_003493652.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Bombus impatiens]
Length = 349
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV---SMKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LFSG + TP++C+++W+ S F+ F HHLVFM +K+L + +
Sbjct: 224 MSARGILTNPALFSGHSITPLNCVQDWLDITSTIPTQFICFHHHLVFMLEKMLPKKSRLF 283
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKGS 92
N+L + V +L+F+E+ + ++ NL K +
Sbjct: 284 FNNLQNKVAVLEFLEDTYGIKPNIIPELFNLTKCT 318
>gi|449684650|ref|XP_002157580.2| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Hydra magnipapillata]
Length = 311
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 56/81 (69%), Gaps = 4/81 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQ-EKD 56
MAA+G+L NP +++G TP+ C+++WV++ F+TF HHL+FM DK LS++ EK
Sbjct: 219 MAAQGMLNNPAMYAGYEVTPLQCVKDWVNIALSLGTPFVTFHHHLIFMLDKWLSNKGEKM 278
Query: 57 QLNSLYSGVEILDFIENKFHV 77
N+L S +LDF+E+++ +
Sbjct: 279 LFNNLSSVAAVLDFLEDRYDI 299
>gi|322795085|gb|EFZ17930.1| hypothetical protein SINV_15746 [Solenopsis invicta]
Length = 357
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LFSG + TP++CI++W+++ F F HHL+FM +K+L +++
Sbjct: 231 MSARGILTNPALFSGYSVTPLTCIQDWLNITSTIPTEFQCFHHHLIFMLEKILPKKDRTL 290
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
NSL S +L+F+++ + V+
Sbjct: 291 FNSLQSKSSVLEFLKDYYDVRP 312
>gi|449278836|gb|EMC86575.1| tRNA-dihydrouridine synthase 4-like protein [Columba livia]
Length = 315
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI++WV + H F F HHL++M +++ S QEK
Sbjct: 236 MVARGLLANPAMFAGYEETPLECIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKKV 295
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + V
Sbjct: 296 FNALSSTSAVLDYLSDHYGV 315
>gi|229366234|gb|ACQ58097.1| tRNA-dihydrouridine synthase 4-like PP35 [Anoplopoma fimbria]
Length = 318
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM---KHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +FSG TP+ CI +WV + + F F HHL++M +++ S E+
Sbjct: 233 MAARGLLTNPAMFSGYEDTPLECIWDWVDIAIEQGTQFTCFHHHLIYMLERVSSQPERKV 292
Query: 58 LNSLYSGVEILDFIENKF 75
NSL S ++D+++N +
Sbjct: 293 FNSLTSTSAVIDYLQNTY 310
>gi|345327855|ref|XP_003431210.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase 4-like
[Ornithorhynchus anatinus]
Length = 411
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + H F F HHL++M +++ S QEK
Sbjct: 332 MVARGLLANPAMFAGYEETPLKCIRDWVDVSLEHGSPFTCFHHHLMYMMERITSKQEKRV 391
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 392 FNALSSTSAVLDYLADHY 409
>gi|326911232|ref|XP_003201965.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Meleagris
gallopavo]
Length = 262
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI++WV + H F F HHL++M +++ S QEK
Sbjct: 181 MVARGLLANPAMFAGYEETPLKCIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKKV 240
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N L S +LD++ + + V S
Sbjct: 241 FNVLSSTSAVLDYLGHHYGVCS 262
>gi|118082094|ref|XP_001231915.1| PREDICTED: tRNA-dihydrouridine synthase 4-like isoform 1 [Gallus
gallus]
Length = 317
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI++WV + H F F HHL++M +++ S QEK
Sbjct: 236 MVARGLLANPAMFAGYEETPLKCIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKKV 295
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N L S +LD++ + + V S
Sbjct: 296 FNILSSTSAVLDYLGHHYGVCS 317
>gi|242011621|ref|XP_002426546.1| tRNA-dihydrouridine synthase, putative [Pediculus humanus corporis]
gi|212510683|gb|EEB13808.1| tRNA-dihydrouridine synthase, putative [Pediculus humanus corporis]
Length = 332
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%), Gaps = 3/64 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL+NP LF G N TP+ C+++WV + N HF TF HHLVFM +K+L + + +
Sbjct: 222 MSARGLLQNPSLFQGYNETPLECVKKWVDISLNSNIHFTTFHHHLVFMLEKILPKKIRRK 281
Query: 58 LNSL 61
N L
Sbjct: 282 FNCL 285
>gi|348508270|ref|XP_003441677.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Oreochromis
niloticus]
Length = 315
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM---KHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +F+G TP+ CI +WV + + F F HHL++M +++ S E+
Sbjct: 230 MAARGLLANPAMFAGYEDTPLQCIWDWVDIAVEQGTPFTCFHHHLIYMLERVSSQPERKV 289
Query: 58 LNSLYSGVEILDFIENKF 75
NSL S ++D+++N +
Sbjct: 290 FNSLSSTSAVIDYLQNTY 307
>gi|432890721|ref|XP_004075495.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Oryzias latipes]
Length = 320
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM---KHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +F+G TP+ CI +WV + + F F HHL++M +++ S E+
Sbjct: 230 MAARGLLANPAMFAGYEDTPLQCIWDWVDIAVEQGTPFSCFHHHLIYMLERVSSQPERKV 289
Query: 58 LNSLYSGVEILDFIENKF 75
NSL S ++D+++N +
Sbjct: 290 FNSLSSTSAVIDYLQNTY 307
>gi|225715276|gb|ACO13484.1| tRNA-dihydrouridine synthase 4-like PP35 [Esox lucius]
Length = 320
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP +F+G N TP+ C+ +WV + + F F HL++M +++ S E+
Sbjct: 232 MAARGLLANPAMFAGYNETPLECVWDWVDLATDQGTPFTCFHQHLIYMLERVCSQPERKV 291
Query: 58 LNSLYSGVEILDFIENKF 75
NSL+S ++D++ + +
Sbjct: 292 FNSLHSTAAVIDYLHSTY 309
>gi|156536943|ref|XP_001608232.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Nasonia
vitripennis]
Length = 346
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV---SMKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M A G+L NP +FSG TP+ CI++W+ S FM HHLVFM +K+L+ +EK
Sbjct: 224 MVAGGILTNPAIFSGYKNTPVECIQDWLDITSTMSTQFMCMHHHLVFMLEKVLTKKEKLV 283
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N L + ++ DF++ +F +Q
Sbjct: 284 FNVLNNKSDVYDFLKERFDIQP 305
>gi|73981937|ref|XP_540383.2| PREDICTED: tRNA-dihydrouridine synthase 4-like [Canis lupus
familiaris]
Length = 317
Score = 72.4 bits (176), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G N TP+ CI +W+ + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYNETPLQCIWDWIDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>gi|224093091|ref|XP_002192992.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Taeniopygia guttata]
Length = 316
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP CI++WV + H F F HHL++M +++ S QEK
Sbjct: 236 MVARGLLANPAMFAGYEETPFQCIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKRV 295
Query: 58 LNSLYSGVEILDFIENKF 75
N L S +LD++ + +
Sbjct: 296 FNVLSSTSAVLDYLNDHY 313
>gi|351708848|gb|EHB11767.1| tRNA-dihydrouridine synthase 4-like protein [Heterocephalus glaber]
Length = 317
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G +TP+ C+++WV + F++F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEQTPLQCVQDWVDIALELGTPFISFHQHLMYMMEKITSRQEKRL 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>gi|72008833|ref|XP_786210.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Strongylocentrotus purpuratus]
Length = 351
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L+NP +++G + TP CI++WV + + F HHL+ M D+ L EK
Sbjct: 229 MSARGILRNPAMYAGYDDTPFQCIQDWVDIGLSLGTNLTYFHHHLMQMLDQYLPGSEKVN 288
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVNLNK 90
NSL S +LD++E F + +F NK
Sbjct: 289 FNSLTSTTAVLDYLETNFGIGWNPNKNFYTRNK 321
>gi|50417946|gb|AAH78413.1| Zgc:92033 [Danio rerio]
Length = 285
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP +FSG TP+ C+ +WV + H F F HHL+ M +++ S E+
Sbjct: 205 MSARGLLSNPAMFSGFEETPLQCVWDWVDIAAEHGTPFTCFHHHLIHMLERITSQPERRV 264
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S ++DF+ N +
Sbjct: 265 FNNLSSTSAVIDFLHNTY 282
>gi|347300161|ref|NP_001003490.2| tRNA-dihydrouridine synthase 4-like [Danio rerio]
Length = 307
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP +FSG TP+ C+ +WV + H F F HHL+ M +++ S E+
Sbjct: 227 MSARGLLSNPAMFSGFEETPLQCVWDWVDIAAEHGTPFTCFHHHLIHMLERITSQPERRV 286
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S ++DF+ N +
Sbjct: 287 FNNLSSTSAVIDFLHNTY 304
>gi|224129636|ref|XP_002190761.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like,
partial [Taeniopygia guttata]
Length = 151
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP CI++WV + H F F HHL++M +++ S QEK
Sbjct: 71 MVARGLLANPAMFAGYEETPFQCIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKRV 130
Query: 58 LNSLYSGVEILDFIENKF 75
N L S +LD++ + +
Sbjct: 131 FNVLSSTSAVLDYLNDHY 148
>gi|346473567|gb|AEO36628.1| hypothetical protein [Amblyomma maculatum]
Length = 358
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARG+L NP +FSG+ TP C+++W+ + F HHL+FM D++LS EK
Sbjct: 261 MAARGMLDNPAMFSGSKHTPSVCVQDWLQLSSQLGCPLTQFHHHLMFMLDQVLSRSEKRI 320
Query: 58 LNSLYSGVEILDFIENKFHV 77
NSL S I+D++ + +
Sbjct: 321 FNSLTSYSAIVDYLRATYSI 340
>gi|348568111|ref|XP_003469842.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Cavia porcellus]
Length = 317
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPFMCFHQHLMYMMEKITSKQEKRI 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>gi|351712773|gb|EHB15692.1| tRNA-dihydrouridine synthase 4-like protein [Heterocephalus glaber]
Length = 317
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G +TP+ CI +WV + F++F HL++M +K+ S QEK
Sbjct: 238 MVARGLLTNPAMFAGYEQTPLQCIRDWVDIALELGTPFISFHQHLMYMMEKITSRQEKRI 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N L S +LD++ + + +
Sbjct: 298 FNVLSSTSAVLDYLTDHYGI 317
>gi|21312100|ref|NP_082278.1| tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like [Mus musculus]
gi|12845370|dbj|BAB26724.1| unnamed protein product [Mus musculus]
Length = 324
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLTNPAMFAGYEETPLKCIWDWVDISLELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 298 FNALSSTSAVLDYLTDHY 315
>gi|110808216|sp|Q32M08.1|DUS4L_MOUSE RecName: Full=tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like;
AltName: Full=tRNA-dihydrouridine synthase 4-like
gi|80478497|gb|AAI09352.1| Dihydrouridine synthase 4-like (S. cerevisiae) [Mus musculus]
Length = 324
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDISLELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 298 FNALSSTSAVLDYLTDHY 315
>gi|291391307|ref|XP_002712160.1| PREDICTED: dihydrouridine synthase 4-like [Oryctolagus cuniculus]
Length = 317
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYSI 317
>gi|354498109|ref|XP_003511158.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Cricetulus griseus]
Length = 317
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +L+++ + + V
Sbjct: 298 FNALSSTSAVLEYLTDNYGV 317
>gi|350588960|ref|XP_003357562.2| PREDICTED: tRNA-dihydrouridine synthase 4-like, partial [Sus
scrofa]
Length = 298
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 215 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKKV 274
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 275 FNALSSTSAVLDYLTDHYGI 294
>gi|321469164|gb|EFX80145.1| hypothetical protein DAPPUDRAFT_304174 [Daphnia pulex]
Length = 303
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L+NP +F+G + TP+ CI++W+ + F F HHL++MC+K +S ++
Sbjct: 222 MSARGILENPAMFAGFSETPIECIKDWMKLSLETGISFTHFHHHLIYMCEKNMSRVDRRY 281
Query: 58 LNSLYSGVEILDFIEN 73
N+L S ++D++EN
Sbjct: 282 FNALSSTTAVIDYMEN 297
>gi|344257920|gb|EGW14024.1| tRNA-dihydrouridine synthase 4-like [Cricetulus griseus]
Length = 299
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 220 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPFMCFHQHLMYMMEKITSRQEKRV 279
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +L+++ + + V
Sbjct: 280 FNALSSTSAVLEYLTDNYGV 299
>gi|440901315|gb|ELR52288.1| tRNA-dihydrouridine synthase 4-like protein, partial [Bos grunniens
mutus]
Length = 323
Score = 70.9 bits (172), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 243 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRI 302
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 303 FNALSSTSAVLDYLTDHYGI 322
>gi|344270847|ref|XP_003407253.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Loxodonta africana]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSKQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>gi|395738851|ref|XP_003777160.1| PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine(20a/20b)
synthase [NAD(P)+]-like [Pongo abelii]
Length = 325
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 246 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 305
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 306 FNALSSTSAIIDYLTDHYGI 325
>gi|209447024|ref|NP_001129275.1| tRNA-dihydrouridine synthase 4-like [Rattus norvegicus]
gi|149051085|gb|EDM03258.1| dihydrouridine synthase 4-like (S. cerevisiae) (predicted) [Rattus
norvegicus]
Length = 321
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ C+ +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCVWDWVDIALELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 298 FNALSSTSAVLDYLTDHY 315
>gi|426357501|ref|XP_004046076.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 1 [Gorilla gorilla gorilla]
gi|426357503|ref|XP_004046077.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 2 [Gorilla gorilla gorilla]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 298 FNALSSTSAIIDYLTDHYGI 317
>gi|402864531|ref|XP_003896514.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Papio anubis]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 298 FNALSSTSAIIDYLTDHYGI 317
>gi|31742496|ref|NP_853559.1| tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like [Homo sapiens]
gi|394025765|ref|NP_001257348.1| tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like [Homo sapiens]
gi|114615410|ref|XP_001164272.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 5 [Pan troglodytes]
gi|332868275|ref|XP_519306.3| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 6 [Pan troglodytes]
gi|397479923|ref|XP_003811250.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 1 [Pan paniscus]
gi|397479925|ref|XP_003811251.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 2 [Pan paniscus]
gi|110808215|sp|O95620.2|DUS4L_HUMAN RecName: Full=tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like;
AltName: Full=pp35; AltName: Full=tRNA-dihydrouridine
synthase 4-like
gi|51095148|gb|EAL24391.1| protein similar to E.coli yhdg and R. capsulatus nifR3 [Homo
sapiens]
gi|119603807|gb|EAW83401.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_c [Homo
sapiens]
gi|119603808|gb|EAW83402.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_c [Homo
sapiens]
gi|119603810|gb|EAW83404.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_c [Homo
sapiens]
gi|410221688|gb|JAA08063.1| dihydrouridine synthase 4-like [Pan troglodytes]
gi|410257808|gb|JAA16871.1| dihydrouridine synthase 4-like [Pan troglodytes]
gi|410297188|gb|JAA27194.1| dihydrouridine synthase 4-like [Pan troglodytes]
gi|410339643|gb|JAA38768.1| dihydrouridine synthase 4-like [Pan troglodytes]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 298 FNALSSTSAIIDYLTDHYGI 317
>gi|380024345|ref|XP_003695961.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Apis florea]
Length = 349
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV---SMKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LFSG + TP++C+++W+ S F F HHLVFM +K+L + +
Sbjct: 224 MSARGILTNPALFSGYSVTPLNCVQDWLDITSTIPTPFTCFHHHLVFMLEKILPKKSRMF 283
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N+L++ +L+F+++ + ++
Sbjct: 284 FNNLHNKTSVLEFLKDTYGLKP 305
>gi|410952046|ref|XP_003982699.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Felis catus]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>gi|328779117|ref|XP_623545.2| PREDICTED: tRNA-dihydrouridine synthase 4-like [Apis mellifera]
Length = 349
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV---SMKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LFSG + TP++C+++W+ S F F HHLVFM +K+L + +
Sbjct: 224 MSARGILTNPALFSGYSVTPLNCVQDWLDITSTIPTPFTCFHHHLVFMLEKILPKKNRMF 283
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N+L++ +L+F+++ + ++
Sbjct: 284 FNNLHNKTSVLEFLKDTYGLKP 305
>gi|4097493|gb|AAD00100.1| PP35 [Homo sapiens]
Length = 307
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 228 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 287
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 288 FNALSSTSAIIDYLTDHYGI 307
>gi|119603805|gb|EAW83399.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_a [Homo
sapiens]
Length = 237
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 158 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 217
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 218 FNALSSTSAIIDYLTDHYGI 237
>gi|388453742|ref|NP_001253555.1| dihydrouridine synthase 4-like [Macaca mulatta]
gi|355560906|gb|EHH17592.1| hypothetical protein EGK_14030 [Macaca mulatta]
gi|355747923|gb|EHH52420.1| hypothetical protein EGM_12857 [Macaca fascicularis]
gi|383410657|gb|AFH28542.1| tRNA-dihydrouridine synthase 4-like [Macaca mulatta]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 298 FNALSSTSAIIDYLTDHYGI 317
>gi|403257051|ref|XP_003921151.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Saimiri boliviensis boliviensis]
Length = 307
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 228 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 287
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 288 FNALSSTSAIIDYLTDHYGI 307
>gi|332237993|ref|XP_003268188.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 1 [Nomascus leucogenys]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 298 FNALSSTSAIIDYLTDHYGI 317
>gi|296209951|ref|XP_002751783.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Callithrix jacchus]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLTNPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 298 FNALSSTSAIIDYLTDHYGI 317
>gi|301755675|ref|XP_002913683.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Ailuropoda
melanoleuca]
gi|281349138|gb|EFB24722.1| hypothetical protein PANDA_001508 [Ailuropoda melanoleuca]
Length = 317
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>gi|410059513|ref|XP_003951152.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Pan troglodytes]
gi|410059515|ref|XP_003951153.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Pan troglodytes]
gi|410059517|ref|XP_003951154.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Pan troglodytes]
gi|426357505|ref|XP_004046078.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 3 [Gorilla gorilla gorilla]
gi|426357507|ref|XP_004046079.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 4 [Gorilla gorilla gorilla]
gi|426357509|ref|XP_004046080.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
isoform 5 [Gorilla gorilla gorilla]
gi|84627517|gb|AAI11775.1| DUS4L protein [Homo sapiens]
gi|119603806|gb|EAW83400.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_b [Homo
sapiens]
gi|119603809|gb|EAW83403.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_b [Homo
sapiens]
gi|194386236|dbj|BAG59682.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 117 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 176
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 177 FNALSSTSAIIDYLTDHYGI 196
>gi|380799123|gb|AFE71437.1| tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like, partial
[Macaca mulatta]
Length = 299
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 220 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 279
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 280 FNALSSTSAIIDYLTDHYGI 299
>gi|431839387|gb|ELK01313.1| tRNA-dihydrouridine synthase 4-like protein [Pteropus alecto]
Length = 276
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 197 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 256
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 257 FNALSSTSAVLDYLTDHYGI 276
>gi|441639909|ref|XP_004090236.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Nomascus leucogenys]
gi|441639912|ref|XP_004090237.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Nomascus leucogenys]
Length = 196
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 117 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 176
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 177 FNALSSTSAIIDYLTDHYGI 196
>gi|148704962|gb|EDL36909.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_b [Mus
musculus]
Length = 324
Score = 70.5 bits (171), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLTNPAMFAGYEETPLKCIWDWVDISLELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 298 FNALSSTSAVLDYLMDHY 315
>gi|395818443|ref|XP_003782638.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Otolemur garnettii]
Length = 317
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGFEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>gi|148704961|gb|EDL36908.1| dihydrouridine synthase 4-like (S. cerevisiae), isoform CRA_a [Mus
musculus]
Length = 327
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 241 MVARGLLTNPAMFAGYEETPLKCIWDWVDISLELGTPFMCFHQHLMYMMEKITSRQEKRV 300
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 301 FNALSSTSAVLDYLMDHY 318
>gi|156400870|ref|XP_001639015.1| predicted protein [Nematostella vectensis]
gi|156226140|gb|EDO46952.1| predicted protein [Nematostella vectensis]
Length = 317
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARG+L NP +++G + TP+ CI++W+ + F F HHL++M +K+ + EK
Sbjct: 237 MAARGILSNPAMYAGYSVTPVECIKDWIDISLSLGTSFTIFHHHLLYMMEKITTKAEKRV 296
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
NSL S +LD++ + ++
Sbjct: 297 FNSLKSTSGVLDYLRENYGIR 317
>gi|187607636|ref|NP_001120313.1| uncharacterized protein LOC100145375 [Xenopus (Silurana)
tropicalis]
gi|156914833|gb|AAI52625.1| Zgc:92033 protein [Danio rerio]
gi|170285083|gb|AAI60936.1| LOC100145375 protein [Xenopus (Silurana) tropicalis]
Length = 306
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP +FSG TP+ C+ +WV + H F F HHL+ M +++ S E+
Sbjct: 226 MSARGLLSNPAMFSGFEETPLQCVWDWVDIAAEHGTPFTCFHHHLIHMLERITSQPERRV 285
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S ++DF+ + +
Sbjct: 286 FNNLSSTSAVIDFLHSTY 303
>gi|443707642|gb|ELU03155.1| hypothetical protein CAPTEDRAFT_112268 [Capitella teleta]
Length = 307
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP +++G + TP+ C+++WV + F F HHL++M + L EK
Sbjct: 227 MSARGILANPAMYAGFDETPLQCLQDWVDISLETGVSFNLFHHHLIYMLENLTCRAEKRL 286
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
NSL S +LDF+ K+ ++
Sbjct: 287 FNSLSSTAAVLDFLREKYDLR 307
>gi|194376574|dbj|BAG57433.1| unnamed protein product [Homo sapiens]
Length = 109
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 30 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 89
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 90 FNALSSTSAIIDYLTDHYGI 109
>gi|149704573|ref|XP_001491222.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Equus caballus]
gi|335772672|gb|AEH58139.1| tRNA-dihydrouridine synthase 4-like-like protein [Equus caballus]
Length = 317
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ C+ +WV + ++ F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCVSDWVDIALELGTPYICFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLRDHYGI 317
>gi|225717662|gb|ACO14677.1| tRNA-dihydrouridine synthase 4-like [Caligus clemensi]
Length = 308
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 3/82 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM---KHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL+NP +++G TP C+E+W+ + F TF HHL +M ++ LS E+
Sbjct: 225 MAARGLLENPAMYAGYGITPKECVEDWLRISLETGTPFQTFHHHLSYMLERSLSRNERKV 284
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N++ S ILD++++ + S
Sbjct: 285 FNAIGSTPGILDYLQDNLCITS 306
>gi|340371111|ref|XP_003384089.1| PREDICTED: tRNA-dihydrouridine synthase 4-like [Amphimedon
queenslandica]
Length = 312
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 53/81 (65%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MAARG+L+NP +F G + TP+ C+E+WV + +TF HH ++M +++ + E+
Sbjct: 230 MAARGMLQNPAMFGGYDETPIECLEDWVDISLRSGLTFTSFHHHCMYMLERVQAKTERRV 289
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
N+L S +L+F+++ +++Q
Sbjct: 290 FNTLNSTPAVLEFLKHHYNIQ 310
>gi|225712694|gb|ACO12193.1| tRNA-dihydrouridine synthase 4-like [Lepeophtheirus salmonis]
Length = 301
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL+NP +++G + TP CI +W+ + F TF HHL +M ++ LS E+
Sbjct: 220 MAARGLLENPAMYAGFDITPAKCILDWLKISLEVGTPFQTFHHHLSYMLERSLSRNERKI 279
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + +
Sbjct: 280 FNALGSTASVLDYLNDNLRI 299
>gi|194759368|ref|XP_001961921.1| GF14697 [Drosophila ananassae]
gi|190615618|gb|EDV31142.1| GF14697 [Drosophila ananassae]
Length = 395
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 1 MAARGLLKNPGLFSGA----NRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ A TP +C+++W+ + F F HHL FM +
Sbjct: 237 MAARGLLANPALFNSAYPEATTTPSACVQQWLDIAEAAGENLLFQCFHHHLTFMWSADMK 296
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQ-----------SPC----------RSHFVNLNK 90
+ Q NSL + E+LDF+++ + ++ +PC H N
Sbjct: 297 RSLRVQFNSLATKSEVLDFLDDHYSIRPSGISPTPAIYTPCSYTHFTPPKHARHIAAEND 356
Query: 91 GSKYEEESEGKFFQE 105
++ +S+GKFF E
Sbjct: 357 EQEWSSKSDGKFFTE 371
>gi|405961217|gb|EKC27051.1| tRNA-dihydrouridine synthase 4-like protein [Crassostrea gigas]
Length = 317
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMT---FLHHLVFMCDKLLSSQEKDQ 57
MAARG+L+NP ++SG TP+ C+++W+ + MT F HL++M +++ E+
Sbjct: 232 MAARGILQNPAMYSGFENTPLQCVQDWIDISMASGMTYPIFHQHLIYMMERIFCRAERRV 291
Query: 58 LNSLYSGVEILDFIENKFHV 77
N L S +LD++E + +
Sbjct: 292 FNVLASTSAVLDYLETHYGI 311
>gi|198429785|ref|XP_002120440.1| PREDICTED: similar to MGC79829 protein [Ciona intestinalis]
Length = 305
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M A+GLL NP LF G TP+SC+++W+ + ++ F F +HL++M D + S EK
Sbjct: 225 MVAQGLLNNPALFQGYKTTPLSCVKDWLDISLSYGTPFTPFHNHLIYMLDNVTSRAEKRI 284
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N+L S +L+F+ NK+ V S
Sbjct: 285 FNNLQSTPAVLEFL-NKYFVDS 305
>gi|241171154|ref|XP_002410603.1| tRNA-dihydrouridine synthase, putative [Ixodes scapularis]
gi|215494872|gb|EEC04513.1| tRNA-dihydrouridine synthase, putative [Ixodes scapularis]
Length = 214
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL+NP +F G TP SC+ +W+ + F HHL+FM + +L EK
Sbjct: 117 MAARGLLENPAMFQGTEHTPASCVRDWLWLSTQLGCPLAQFHHHLMFMLEHVLPRSEKRV 176
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S ++D++ + +
Sbjct: 177 FNALTSSSAVVDYLRDSY 194
>gi|357613396|gb|EHJ68482.1| tRNA-dihydrouridine synthase [Danaus plexippus]
Length = 366
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 5/66 (7%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLSSQEK 55
M A G+L NP LF+GAN+TP+ C++ W+++K + F + HHLVFM K+L+ ++K
Sbjct: 205 MVADGILNNPALFTGANKTPLYCVKHWMNLKDSSDDKITFQCYHHHLVFMLGKILTKKQK 264
Query: 56 DQLNSL 61
+ N+L
Sbjct: 265 QEFNNL 270
>gi|291239208|ref|XP_002739522.1| PREDICTED: dihydrouridine synthase 4-like [Saccoglossus
kowalevskii]
Length = 367
Score = 66.2 bits (160), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARG+L NP +++G TP+ CI++WV + F F HHL+ M + + S +K
Sbjct: 243 MAARGMLHNPAMYAGYEFTPLECIQDWVDISLQLGTQFQCFHHHLIQMMEHVTSKADKRI 302
Query: 58 LNSLYSGVEILDFIENKFHVQ-SPCRSHFVNLNK 90
N+L + +LD+++ + V +P R H LNK
Sbjct: 303 FNTLSNVPAVLDYLQEHYQVSYNPARFHH-QLNK 335
>gi|195398221|ref|XP_002057721.1| GJ17945 [Drosophila virilis]
gi|194141375|gb|EDW57794.1| GJ17945 [Drosophila virilis]
Length = 399
Score = 65.9 bits (159), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 71/153 (46%), Gaps = 34/153 (22%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMK-----HNHFMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ A TP +C+++W+ + H F F HHL FMC +
Sbjct: 240 MAARGLLANPALFNSDYPQATTTPKACVQQWLDIAQSAGDHLQFQCFHHHLSFMCSSEMK 299
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQS-------PCR------SHFVNLNKG------- 91
+ Q NSL S ++L F+ + ++ P SHF
Sbjct: 300 RALRVQFNSLSSKSQVLQFLSEHYDLRPNANSSAQPATYTNCTYSHFTPPKHARHLAAEA 359
Query: 92 --SKYEEESEGKFFQEEMSSVKKQVAKDLMEDI 122
S + ES+GK+F E + +Q +++ +ED+
Sbjct: 360 EESCWNSESDGKYFTEFKT---QQQSREKLEDL 389
>gi|328773713|gb|EGF83750.1| hypothetical protein BATDEDRAFT_21188 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK----HNHFMTFLHHLVFMCDKLLSSQEKD 56
MAARGLL+NP LFSG + TP C+E+++ + HF+T HHL++M D + EK
Sbjct: 244 MAARGLLENPALFSGYDTTPFECVEKFLKLSIGYGSTHFITH-HHLMYMLDASMERAEKR 302
Query: 57 QLNSLYSGVEILDFIENKFHV 77
N L + I+D++ + + +
Sbjct: 303 HFNCLSTTPAIIDYLSDHYGI 323
>gi|410910122|ref|XP_003968539.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Takifugu rubripes]
Length = 305
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM---KHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + + F F HL++M +++ S E+
Sbjct: 220 MVARGLLANPAMFAGFEDTPLKCIWDWVDISIEQGTPFTCFHRHLIYMMERVSSQPERKI 279
Query: 58 LNSLYSGVEILDFIENKF 75
NSL S ++D+++ +
Sbjct: 280 FNSLSSTSAVIDYLQKTY 297
>gi|391325013|ref|XP_003737035.1| PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like
[Metaseiulus occidentalis]
Length = 303
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M A+GLL NP LF+G TP SC+++++ + + F F HH+ +M LL ++ Q
Sbjct: 224 MVAQGLLNNPALFAGHTHTPESCVQKYLDIATAYGTQFAHFQHHVTYMVKDLLPRADRHQ 283
Query: 58 LNSLYSGVEILDFIENK 74
+N L S ILDF+E +
Sbjct: 284 MNLLCSYAAILDFLEER 300
>gi|195997917|ref|XP_002108827.1| hypothetical protein TRIADDRAFT_52208 [Trichoplax adhaerens]
gi|190589603|gb|EDV29625.1| hypothetical protein TRIADDRAFT_52208 [Trichoplax adhaerens]
Length = 309
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 50/76 (65%), Gaps = 3/76 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L+NP L++G ++TP+ C+E++V + HF F HL+FM +K+ +++
Sbjct: 227 MSARGILRNPALYAGYSKTPICCVEDFVRITSELETHFTPFHRHLIFMLEKITCKSDREF 286
Query: 58 LNSLYSGVEILDFIEN 73
SL S E+L+++ +
Sbjct: 287 FCSLRSKDEVLNYLHD 302
>gi|330799310|ref|XP_003287689.1| hypothetical protein DICPUDRAFT_151810 [Dictyostelium purpureum]
gi|325082309|gb|EGC35795.1| hypothetical protein DICPUDRAFT_151810 [Dictyostelium purpureum]
Length = 324
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN----HFMTFLHHLVFMCDKLLSSQEKD 56
MAARGLL NP LF G ++TP+ CIE+++++ H + F HL++M + + EK
Sbjct: 244 MAARGLLSNPALFMGYDKTPIECIEDFINIYSEYGGLHPIIFHRHLIYMLYEYQNKNEKS 303
Query: 57 QLNSLYSGVEILDFIENKF 75
+ N + + ILD+I +KF
Sbjct: 304 EFNKIKTVSGILDYINDKF 322
>gi|384483549|gb|EIE75729.1| hypothetical protein RO3G_00433 [Rhizopus delemar RA 99-880]
Length = 288
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK----HNHFMTFLHHLVFMCDKLLSSQEKD 56
M+ARGLL+NP LF+G TP CIEE+V + N F+ F HHL++M + ++ + E+
Sbjct: 203 MSARGLLQNPALFAGYESTPWECIEEYVRLALEYGTNSFI-FHHHLMYMFEDIMCNAERK 261
Query: 57 QLNSLYSGVEILDFIENKF 75
N+L S ILD +E +
Sbjct: 262 TFNTLSSIPAILDHLEENW 280
>gi|125986951|ref|XP_001357238.1| GA10353 [Drosophila pseudoobscura pseudoobscura]
gi|54645569|gb|EAL34307.1| GA10353 [Drosophila pseudoobscura pseudoobscura]
Length = 398
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 30/135 (22%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ A TP++C+E+W+ + F F HHL FM +
Sbjct: 240 MAARGLLANPALFNSDYPTATTTPLACVEQWLDIASAAGDNLLFQCFHHHLTFMWSSEMK 299
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQ-------------------SPCR--SHFVNLNK 90
+ Q NSL + +++DF+ ++V+ +P R H +
Sbjct: 300 RSLRIQFNSLGTKQQVVDFLREHYNVRTSGVDPEPAPYTDCTYTHFTPPRHARHIAAEAE 359
Query: 91 GSKYEEESEGKFFQE 105
+ +S+GKFF E
Sbjct: 360 EKAWSSKSDGKFFTE 374
>gi|195031103|ref|XP_001988289.1| GH11083 [Drosophila grimshawi]
gi|193904289|gb|EDW03156.1| GH11083 [Drosophila grimshawi]
Length = 398
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMKHN-----HFMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ A TP SC+++W+ + + HF F HHL FM +
Sbjct: 240 MAARGLLANPALFNSDYPLAETTPKSCVQQWLDIAQSAGERLHFQCFHHHLTFMWSSEMK 299
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQ 78
+ Q NSL S ++L+F+ + V+
Sbjct: 300 RALRVQFNSLGSKSQVLEFLAEHYDVR 326
>gi|213403071|ref|XP_002172308.1| tRNA-dihydrouridine synthase [Schizosaccharomyces japonicus yFS275]
gi|212000355|gb|EEB06015.1| tRNA-dihydrouridine synthase [Schizosaccharomyces japonicus yFS275]
Length = 347
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGL++NP LF+G TP C+E++V+ + F F HHL+ M K+ + +E+ Q
Sbjct: 230 MSARGLMENPALFAGYTSTPWGCVEKFVAYATGYSLNFQLFEHHLMTMMGKMTTKRERMQ 289
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHF 85
+ S S ++D+++ F ++ P + F
Sbjct: 290 VPS-ESYASVIDWLDETFVLRRPGETEF 316
>gi|157111456|ref|XP_001651572.1| tRNA-dihydrouridine synthase [Aedes aegypti]
gi|108878341|gb|EAT42566.1| AAEL005898-PA [Aedes aegypti]
Length = 391
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLSSQEK 55
M+ARG+L NP +++G RTP+ CI+ W+++ + HHL FM + LL+ +++
Sbjct: 235 MSARGILSNPAMYAGFERTPLECIQRWLNITAQADTDITYQAMHHHLTFMAESLLTKEQR 294
Query: 56 DQLNSLYSGV-EILDFIENKFHVQS-PC 81
N+L + DF F ++S PC
Sbjct: 295 IVFNNLTKDKGRVYDFFREHFQLESQPC 322
>gi|195156341|ref|XP_002019059.1| GL26162 [Drosophila persimilis]
gi|194115212|gb|EDW37255.1| GL26162 [Drosophila persimilis]
Length = 398
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 30/135 (22%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ A TP +C+E+W+ + F F HHL FM +
Sbjct: 240 MAARGLLANPALFNSDYPTATTTPSACVEQWLDIASAAGDNLLFQCFHHHLTFMWSSEMK 299
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQ-------------------SPCR--SHFVNLNK 90
+ Q NSL + +++DF+ ++V+ +P R H +
Sbjct: 300 RSLRVQFNSLGTKQQVVDFLREHYNVRTSGVDPEPAPYTDCTYTHFTPPRHARHIAAEAE 359
Query: 91 GSKYEEESEGKFFQE 105
+ +S+GKFF E
Sbjct: 360 EKAWSSKSDGKFFTE 374
>gi|195434933|ref|XP_002065456.1| GK14658 [Drosophila willistoni]
gi|194161541|gb|EDW76442.1| GK14658 [Drosophila willistoni]
Length = 404
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMK-----HNHFMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ A TP+SC+++W+ + + HF F HHL FM +
Sbjct: 244 MAARGLLANPALFNSNYPEAKVTPLSCVQQWLDIACAAGDNLHFQCFHHHLTFMWSSQMK 303
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQS 79
+ + Q N L + +++ F++ + ++
Sbjct: 304 RKLRVQFNGLDTKPQVMAFLDENYQIRP 331
>gi|195484353|ref|XP_002090658.1| GE13230 [Drosophila yakuba]
gi|194176759|gb|EDW90370.1| GE13230 [Drosophila yakuba]
Length = 395
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 9/87 (10%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ A TP+SC+++W+ + F F HHL FM +
Sbjct: 238 MAARGLLANPALFNSIYPDAKTTPLSCVQQWLDIASAAGNNLLFQCFHHHLTFMWSAQIK 297
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQ 78
+ Q NSL S +++DF++ ++++
Sbjct: 298 RDLRVQFNSLGSKEQVVDFLKEHYNLE 324
>gi|254572950|ref|XP_002493584.1| Dihydrouridine synthase [Komagataella pastoris GS115]
gi|238033383|emb|CAY71405.1| Dihydrouridine synthase [Komagataella pastoris GS115]
gi|328354588|emb|CCA40985.1| potential tRNA dihydrouridine synthase similar to S. cerevisiae
DUS4 (YLR405W) [Komagataella pastoris CBS 7435]
Length = 352
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
M+ RGLL+NP LFSG N+T C+E + S+ ++ + F HHL M ++ + +E Q
Sbjct: 248 MSVRGLLENPSLFSGYNKTTWGCVERFFSLSMHYGLPFRIIQHHLSCMTSQIFTKKEHLQ 307
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
LN + +E+LDF + F ++
Sbjct: 308 LNQCNNMIELLDFFDRDFELK 328
>gi|170057436|ref|XP_001864482.1| tRNA-dihydrouridine synthase [Culex quinquefasciatus]
gi|167876880|gb|EDS40263.1| tRNA-dihydrouridine synthase [Culex quinquefasciatus]
Length = 378
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLSSQEK 55
M+ARG+L NPGL++G +TP CI+ W+ + + HHL FM + +LS ++
Sbjct: 213 MSARGILSNPGLYAGHRQTPRECIQRWLDITAQADTDITYQAMHHHLSFMAESMLSKTQR 272
Query: 56 DQLNSLYSGVE-ILDFIENKFHVQS-PC 81
N L ++DF+ F ++ PC
Sbjct: 273 VTFNGLSKDKRLVVDFLREHFQLEPRPC 300
>gi|270009693|gb|EFA06141.1| hypothetical protein TcasGA2_TC008984 [Tribolium castaneum]
Length = 418
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 21/98 (21%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---------------------FMTFL 39
M A GLL NP LF+ ++ T CI+ W+++ +N F F
Sbjct: 251 MVANGLLTNPTLFTESSVTTTDCIQRWLNICYNTTLDYRDINRLHTIPEKPKNLTFQCFH 310
Query: 40 HHLVFMCDKLLSSQEKDQLNSLYSGVEILDFIENKFHV 77
HHLVFM +K+L+ EK N+L + ++L +I+NKF++
Sbjct: 311 HHLVFMLEKILTRSEKRIFNNLQTFEDVLSYIKNKFNL 348
>gi|189239358|ref|XP_974445.2| PREDICTED: similar to tRNA-dihydrouridine synthase [Tribolium
castaneum]
Length = 401
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 21/98 (21%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---------------------FMTFL 39
M A GLL NP LF+ ++ T CI+ W+++ +N F F
Sbjct: 234 MVANGLLTNPTLFTESSVTTTDCIQRWLNICYNTTLDYRDINRLHTIPEKPKNLTFQCFH 293
Query: 40 HHLVFMCDKLLSSQEKDQLNSLYSGVEILDFIENKFHV 77
HHLVFM +K+L+ EK N+L + ++L +I+NKF++
Sbjct: 294 HHLVFMLEKILTRSEKRIFNNLQTFEDVLSYIKNKFNL 331
>gi|405117593|gb|AFR92368.1| tRNA-dihydrouridine synthase [Cryptococcus neoformans var. grubii
H99]
Length = 408
Score = 60.5 bits (145), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP LF+G ++TP CI +++++ ++ F F HL +M + LS EK
Sbjct: 308 MAARGLLANPALFAGYDKTPEDCISQFINLGLDYGFNFSLFHRHLAYMLESHLSRVEKVW 367
Query: 58 LNSLYSGVEILDFIENK 74
NSL S V +++++ +
Sbjct: 368 FNSLTSQVSAIEWLDGR 384
>gi|66802582|ref|XP_635163.1| tRNA-dihydrouridine synthase 4-like protein [Dictyostelium
discoideum AX4]
gi|60463479|gb|EAL61664.1| tRNA-dihydrouridine synthase 4-like protein [Dictyostelium
discoideum AX4]
Length = 344
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN----HFMTFLHHLVFMCDKLLSSQEKD 56
M+ARGLL NP LF G ++TP+ CI++++++ H + F HL++M + + EK
Sbjct: 264 MSARGLLTNPALFQGYDKTPIECIKDFINIYSEYGGLHPVIFHRHLMYMLYEYHNKNEKS 323
Query: 57 QLNSLYSGVEILDFIENKF 75
+ N L + I+D+I +KF
Sbjct: 324 EFNKLSTISGIMDYINDKF 342
>gi|321251331|ref|XP_003192028.1| hypothetical protein CGB_B2580W [Cryptococcus gattii WM276]
gi|317458496|gb|ADV20241.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 408
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP LF+G +RTP C+ +++++ ++ F F HL +M + LS EK
Sbjct: 308 MAARGLLANPALFAGYDRTPEECVSQFINLGLDYGFNFSLFHRHLAYMLEPHLSRVEKVW 367
Query: 58 LNSLYSGVEILDFIENK 74
NSL S +++++ +
Sbjct: 368 FNSLTSQASAIEWLDER 384
>gi|19921524|ref|NP_609939.1| CG10495 [Drosophila melanogaster]
gi|7298533|gb|AAF53752.1| CG10495 [Drosophila melanogaster]
gi|17862030|gb|AAL39492.1| LD05576p [Drosophila melanogaster]
gi|220942934|gb|ACL84010.1| CG10495-PA [synthetic construct]
gi|220953160|gb|ACL89123.1| CG10495-PA [synthetic construct]
Length = 396
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ TP+SC+++W+ + F F HHL FM +
Sbjct: 238 MAARGLLANPALFNSNYPDGKTTPLSCVQQWLDIASAAGDNLLFQCFHHHLTFMYSAQMK 297
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQ 78
+ Q NSL S +++DF++ ++++
Sbjct: 298 RDLRVQFNSLGSKEQVVDFLKEHYNLE 324
>gi|401881354|gb|EJT45654.1| hypothetical protein A1Q1_05803 [Trichosporon asahii var. asahii
CBS 2479]
gi|406701724|gb|EKD04837.1| hypothetical protein A1Q2_00858 [Trichosporon asahii var. asahii
CBS 8904]
Length = 393
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MAARGLL NP LF+G RTP + +V++ ++ + + H+ +M ++ S EK
Sbjct: 298 MAARGLLANPALFAGYERTPSHAVANFVNLATDYGLIYSLYHRHVAYMLEERFSKPEKVW 357
Query: 58 LNSLYSGVEILDFIENK 74
NSL S V+++++++N+
Sbjct: 358 FNSLGSTVQVVEYLQNR 374
>gi|195580071|ref|XP_002079879.1| GD24181 [Drosophila simulans]
gi|194191888|gb|EDX05464.1| GD24181 [Drosophila simulans]
Length = 396
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 30/135 (22%)
Query: 1 MAARGLLKNPGLFSGA----NRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ + TP+SC+++W+ + F F HHL FM +
Sbjct: 238 MAARGLLANPALFNRSYPEGKTTPLSCVQQWLDIASAARDNLLFQCFHHHLTFMYSAHMK 297
Query: 52 SQEKDQLNSLYSGVEILDFIENKF--------------------HVQSPCRS-HFVNLNK 90
+ Q NSL S +++DF++ + H P + H +
Sbjct: 298 RDLRVQFNSLGSKEQVVDFLKKHYNLEYSEDDTPSADYTDCTYTHFTPPKHARHIAAESD 357
Query: 91 GSKYEEESEGKFFQE 105
+ +S+GKFF E
Sbjct: 358 EQAWSSKSDGKFFTE 372
>gi|393219503|gb|EJD04990.1| FMN-linked oxidoreductase [Fomitiporia mediterranea MF3/22]
Length = 337
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP LFSG + TP I +V + ++ F F HL F+ + LS E+
Sbjct: 253 MSARGLLANPALFSGYDVTPPETIRNFVRISTDYGLLFPLFHRHLSFILESQLSRHERAD 312
Query: 58 LNSLYSGVEILDFIENK 74
NSL S I+D++E +
Sbjct: 313 FNSLASYAGIIDYLEAR 329
>gi|194879780|ref|XP_001974300.1| GG21157 [Drosophila erecta]
gi|190657487|gb|EDV54700.1| GG21157 [Drosophila erecta]
Length = 396
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 30/135 (22%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ TP+SC+++W+ + F F HHL FM +
Sbjct: 238 MAARGLLANPALFNSNYPEGKTTPLSCVQQWLDIASAAGDNLLFQCFHHHLTFMWSAHMK 297
Query: 52 SQEKDQLNSLYSGVEILDFIE--------------------NKFHVQSPCRS-HFVNLNK 90
+ Q NSL S +++DF++ H P + H +
Sbjct: 298 RDLRVQFNSLSSKEQVVDFLKEHHNLEYAEDESTAADYTDCTYTHFTPPKHARHLAAESD 357
Query: 91 GSKYEEESEGKFFQE 105
+ +S+GKFF E
Sbjct: 358 EQAWSSKSDGKFFTE 372
>gi|392577566|gb|EIW70695.1| hypothetical protein TREMEDRAFT_68173 [Tremella mesenterica DSM
1558]
Length = 370
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP LF+G +TP+ +E++V++ ++ F F HL +M + + E+
Sbjct: 272 MGARGLLANPALFAGYTKTPIHAVEQFVNLSVDYGLIFPLFQKHLAYMLESRFARPERVW 331
Query: 58 LNSLYSGVEILDFIENK 74
NSL S V +++++ ++
Sbjct: 332 FNSLTSSVGVIEYLSSR 348
>gi|324517466|gb|ADY46829.1| tRNA-dihydrouridine synthase-like protein [Ascaris suum]
Length = 348
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM---KHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAA GLL NP +F+G + TP+ C+ +W+ + + + F F L+FM L+S ++
Sbjct: 267 MAANGLLDNPAMFAGHDSTPVQCVLDWLRITAEQGSAFDLFHQQLIFMLRSTLTSPQRTL 326
Query: 58 LNSLYSGVEILDFI 71
N L S ++DF+
Sbjct: 327 FNELTSRAAVVDFL 340
>gi|324510450|gb|ADY44369.1| tRNA-dihydrouridine synthase-like protein [Ascaris suum]
Length = 560
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM---KHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAA GLL NP +F+G + TP+ C+ +W+ + + + F F L+FM L+S ++
Sbjct: 479 MAANGLLDNPAMFAGHDSTPVQCVLDWLRITAEQGSAFDLFHQQLIFMLRSTLTSPQRTL 538
Query: 58 LNSLYSGVEILDFI 71
N L S ++DF+
Sbjct: 539 FNELTSRAAVVDFL 552
>gi|195116601|ref|XP_002002842.1| GI17600 [Drosophila mojavensis]
gi|193913417|gb|EDW12284.1| GI17600 [Drosophila mojavensis]
Length = 397
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 29/134 (21%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWV----SMKHN-HFMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ TP C+++W+ S HN +F F HHL FM + +
Sbjct: 240 MAARGLLANPALFNSDYQLETATPKVCVQQWLDIAESAGHNLNFQCFHHHLSFMWNSTMK 299
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQSPCRS-----------HFVNLNKG--------- 91
+ Q NSL S ++L F+ + ++ S HF
Sbjct: 300 RALRVQFNSLGSKDQVLQFLAEHYDIRPSSNSSTYQYTNCTYTHFTPPKHARHLAVEAED 359
Query: 92 SKYEEESEGKFFQE 105
S ++ ++GK+F +
Sbjct: 360 SGWDASTDGKYFTD 373
>gi|328868434|gb|EGG16812.1| tRNA-dihydrouridine synthase 4-like protein [Dictyostelium
fasciculatum]
Length = 346
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN----HFMTFLHHLVFMCDKLLSSQEKD 56
M+ARG+L NP L+ G + TP+ CI+E++ + + F HL++M + S EK
Sbjct: 266 MSARGILCNPALYMGYDTTPIECIKEFIDINSQIGGLNTDIFHRHLMYMLYSVNSKAEKK 325
Query: 57 QLNSLYSGVEILDFIENKFHV 77
+ N L + I+DFI++K+++
Sbjct: 326 EFNLLSTTPSIIDFIKDKYYL 346
>gi|134106399|ref|XP_778210.1| hypothetical protein CNBA2100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260913|gb|EAL23563.1| hypothetical protein CNBA2100 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 407
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP LF+G ++TP C+ +++++ ++ F F HL +M + LS EK
Sbjct: 308 MAARGLLANPALFAGYDKTPEDCVSQFINLGLDYGFNFSLFHRHLAYMLESHLSRVEKVW 367
Query: 58 LNSLYSGVEILDFIENK 74
NSL S ++++ +
Sbjct: 368 FNSLTSQASAIEWLNER 384
>gi|58258399|ref|XP_566612.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222749|gb|AAW40793.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 407
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NP LF+G ++TP C+ +++++ ++ F F HL +M + LS EK
Sbjct: 308 MAARGLLANPALFAGYDKTPEDCVSQFINLGLDYGFNFSLFHRHLAYMLESHLSRVEKVW 367
Query: 58 LNSLYSGVEILDFIENK 74
NSL S ++++ +
Sbjct: 368 FNSLTSQASAIEWLNER 384
>gi|320583735|gb|EFW97948.1| dihydrouridine synthase [Ogataea parapolymorpha DL-1]
Length = 338
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 3/88 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MAARG+L NP +F+G + P IE++ ++ + + F HHL M +S Q +++
Sbjct: 233 MAARGILNNPAMFAGYEKAPWGAIEKFWNLSTAYGLPFRLLQHHLGCMLVGQISKQLQNE 292
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHF 85
LNS S +E++D+ + F ++ P + F
Sbjct: 293 LNSKSSLLELMDWFDANFELKRPTDTGF 320
>gi|19075762|ref|NP_588262.1| tRNA dihydrouridine synthase Dus4 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74626875|sp|O74553.1|DUS4_SCHPO RecName: Full=tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+];
AltName: Full=tRNA-dihydrouridine synthase 4
gi|3560252|emb|CAA20719.1| tRNA dihydrouridine synthase Dus4 (predicted) [Schizosaccharomyces
pombe]
Length = 326
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE--WVSMKHN-HFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL+NP LF+G TP C+E W S ++ +F F HHL M ++ + +E+
Sbjct: 230 MSARGLLENPALFAGYEETPWGCVERFLWYSTSYSLNFHLFYHHLTTMMGQMTTKRERMT 289
Query: 58 LNSLYSGVEILDFIENKFHVQSP 80
+ S ++D+++ F V+ P
Sbjct: 290 IPK-DSFASVMDWLDEHFVVRRP 311
>gi|268576246|ref|XP_002643103.1| Hypothetical protein CBG23028 [Caenorhabditis briggsae]
Length = 279
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MAA GLL NP LF+G TP C+E ++ + H + +L HL +M LLS+Q++
Sbjct: 202 MAANGLLDNPALFAGYEYTPSDCVESFMRLSREHGLDWLLYHQHLQYMLRPLLSAQQRRI 261
Query: 58 LNSLYSGVEILDFIEN 73
N L + I F+ N
Sbjct: 262 FNELNGRLAIDGFLNN 277
>gi|403165575|ref|XP_003325561.2| hypothetical protein PGTG_07394 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165780|gb|EFP81142.2| hypothetical protein PGTG_07394 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 310
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM-KHNHFM--TFLHHLVFMCDKLLSSQEKDQ 57
M+ARGL +NP LF+G +R P++ I+ ++S+ N FM F HL M SS+E+ +
Sbjct: 220 MSARGLQENPALFAGYDRIPLAGIQRFLSLSAQNGFMFPLFHRHLADMLGPWFSSREEKK 279
Query: 58 -LNSLYSGVEILDFIENKFHVQS 79
N L S ++DF+E +++Q
Sbjct: 280 FFNMLSSPPSVIDFLEETYNIQP 302
>gi|402217097|gb|EJT97179.1| FMN-linked oxidoreductase [Dacryopinax sp. DJM-731 SS1]
Length = 307
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH----FMTFLHHLVFMCDKLLSSQEKD 56
M+ARGLL NP LF+G TP I +V + ++ F F H+ M ++ L EK
Sbjct: 224 MSARGLLANPALFAGYRSTPAEAITRFVEIATSYGGLPFALFHRHIACMLEERLGRAEKT 283
Query: 57 QLNSLYSGVEILDFIENK 74
NSL S +LD++E +
Sbjct: 284 YFNSLTSHAGVLDYLEGR 301
>gi|388578805|gb|EIM19140.1| dihydrouridine synthase 4-like protein [Wallemia sebi CBS 633.66]
Length = 332
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP +F+G TP+ CI+ ++ + ++ F F H+ +M + LS ++
Sbjct: 250 MSARGLLANPAMFAGYEETPIECIDRFIDLSMSYGLQFPLFHRHIYYMLESKLSKTQRQS 309
Query: 58 LNSLYSGVEILDFIE 72
+++ S LD+IE
Sbjct: 310 WHNVISTATALDWIE 324
>gi|50554003|ref|XP_504410.1| YALI0E26059p [Yarrowia lipolytica]
gi|49650279|emb|CAG80011.1| YALI0E26059p [Yarrowia lipolytica CLIB122]
Length = 359
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIE---EWVSMKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARG+L NP +F+G +TP +E ++V+ + +HH M + L+ EK
Sbjct: 255 MAARGILSNPAMFAGYTKTPWRAVELFWDYVTAYGLPYALTIHHFSEMLEAELTRYEKKD 314
Query: 58 LNSLYSGVEILDFIENKFHVQSP 80
LN+ + VE++++ +++F ++ P
Sbjct: 315 LNNCKNMVELINWFDDRFDLKRP 337
>gi|402584035|gb|EJW77977.1| DUS4L protein [Wuchereria bancrofti]
Length = 275
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+A GLL+NP +F+G TP C+ +WV + H F F L+FM L+S+++
Sbjct: 195 MSANGLLENPAMFAGYTSTPKQCVADWVRLTTEHGCPFDLFHQQLMFMLRSSLTSRQRTM 254
Query: 58 LNSLYSGVEILDFI 71
N L + + D++
Sbjct: 255 FNGLSNHPAVFDYL 268
>gi|170572143|ref|XP_001891998.1| tRNA-dihydrouridine synthase 4 [Brugia malayi]
gi|158603133|gb|EDP39179.1| tRNA-dihydrouridine synthase 4, putative [Brugia malayi]
Length = 321
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+A GLL+NP +F+G TP C+ +WV + H F F L+FM L+S+++
Sbjct: 241 MSANGLLENPAMFAGYTSTPKQCVADWVRLATEHGCPFDLFHQQLMFMLRSSLTSRQRTM 300
Query: 58 LNSLYSGVEILDFI 71
N L + + D++
Sbjct: 301 FNGLSNHPAVFDYL 314
>gi|307166837|gb|EFN60767.1| tRNA-dihydrouridine synthase 4-like [Camponotus floridanus]
Length = 748
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKH---NHFMTFLHHLVFM 45
M+ARG+L NP LFSG + TP+ CI++W+++ F F HHLVF+
Sbjct: 224 MSARGILNNPALFSGHSTTPLVCIQDWLNITSTIPTEFQCFHHHLVFI 271
>gi|164657526|ref|XP_001729889.1| hypothetical protein MGL_2875 [Malassezia globosa CBS 7966]
gi|159103783|gb|EDP42675.1| hypothetical protein MGL_2875 [Malassezia globosa CBS 7966]
Length = 308
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV--SMKHNHFMTFLH-HLVFMCDKLLSSQ-EKD 56
M+ARGLL NP LF+G TP + +V +MK + + LH HL +M + +SS+ E
Sbjct: 227 MSARGLLANPALFAGEPHTPREAVRRFVDYAMKWSLPTSLLHRHLAYMLEDTMSSRAESI 286
Query: 57 QLNSLYSGVEILDFIENKFHV 77
N+L S ILD++ N +V
Sbjct: 287 YFNTLASPASILDWLTNAGYV 307
>gi|403171791|ref|XP_003330991.2| hypothetical protein PGTG_12954 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375169578|gb|EFP86572.2| hypothetical protein PGTG_12954 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 303
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSM-KHNHFM--TFLHHLVFMCDKLLSSQEKDQ 57
M+ARGL +N LF+G +R P++ I+ ++S+ N FM F HL M SSQE+ +
Sbjct: 213 MSARGLQENTALFAGYDRIPLAGIQRFLSLSAQNGFMFPLFHRHLADMLGPWFSSQEEKK 272
Query: 58 -LNSLYSGVEILDFIENKFHVQSP 80
N L S ++DF+E +++Q P
Sbjct: 273 FFNMLSSPPFVIDFLEETYNIQPP 296
>gi|341889683|gb|EGT45618.1| hypothetical protein CAEBREN_21814 [Caenorhabditis brenneri]
Length = 307
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MAA GLL NP LF+G TP C++ ++ + H + +L HL +M LLS+Q++
Sbjct: 228 MAANGLLDNPALFAGHAYTPSDCVQNFMRLSKEHGLDWLLYHQHLQYMLRPLLSAQQRRV 287
Query: 58 LNSLYSGVEILDFIEN 73
N L + I F+ N
Sbjct: 288 FNELNGRLAIDQFLNN 303
>gi|448081184|ref|XP_004194826.1| Piso0_005344 [Millerozyma farinosa CBS 7064]
gi|359376248|emb|CCE86830.1| Piso0_005344 [Millerozyma farinosa CBS 7064]
Length = 354
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MA RG+L NP +F+G ++TP +E ++ + ++ + F HHL M DK++ + +
Sbjct: 254 MAVRGILANPAIFAGYDKTPWMAVEIFLHLATSYGLPFRITQHHLSEMMDKMIPRKVLKE 313
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
+N + ++++D++++ F+V+
Sbjct: 314 MNEKTNLIDLIDWLDDTFYVK 334
>gi|453082951|gb|EMF10997.1| FMN-linked oxidoreductase [Mycosphaerella populorum SO2202]
Length = 367
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---WVSMKHNHFMTFLHHLVFMCDKL--LSSQEK 55
MAARG+L+NP +F+G P+ C+++ W F LHH+ M K+ + +E+
Sbjct: 282 MAARGILENPAMFAGYEEVPVRCVQDFMYWAIKCPIPFPLVLHHVSEMTAKMEGMGKKER 341
Query: 56 DQLNSLYSGVEILDFIENKF 75
+L V+++DF+E+K+
Sbjct: 342 RRLGECRDLVDLIDFVEDKW 361
>gi|448085668|ref|XP_004195917.1| Piso0_005344 [Millerozyma farinosa CBS 7064]
gi|359377339|emb|CCE85722.1| Piso0_005344 [Millerozyma farinosa CBS 7064]
Length = 359
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MA RG+L NP LF+G ++TP +E ++ + ++ + F HHL M DK++ + +
Sbjct: 254 MAVRGILANPALFAGFDKTPWMAVEIFLHLAASYGLPFRITQHHLSEMLDKIIPRKVLKE 313
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
+N + ++++D+++ F+V+
Sbjct: 314 MNEKTNLIDLIDWLDATFYVK 334
>gi|430810867|emb|CCJ31596.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 153
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 3/91 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV--SMKHN-HFMTFLHHLVFMCDKLLSSQEKDQ 57
M++RG+L NP LFSG + P S IE ++ S+ + +F F H++ M K+L+ ++
Sbjct: 54 MSSRGILFNPALFSGFDSCPWSAIERFIEYSLSYGLNFHLFQQHILKMMGKILNKKDSVD 113
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVNL 88
L+ V ILD+I+ +F ++ P F N+
Sbjct: 114 LSKQIGIVGILDWIDERFVLRRPGEPGFGNV 144
>gi|449296646|gb|EMC92665.1| hypothetical protein BAUCODRAFT_27019 [Baudoinia compniacensis UAMH
10762]
Length = 395
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 1 MAARGLLKNPGLF--SGANRTPMSCIEE---WVSMKHNHFMTFLHHLVFMCDKL--LSSQ 53
MAARG+L+NP +F SG TP+ C++ W F LHH+ M ++
Sbjct: 297 MAARGILENPAMFSHSGVGGTPVECVQRFLGWAVRCPIPFPLVLHHVSEMTGRMKGFGKL 356
Query: 54 EKDQLNSLYSGVEILDFIENKFHVQSPC 81
E+ +L + +E++DF++ K+ VQ C
Sbjct: 357 ERRRLGACRDLIELVDFVDAKWGVQRYC 384
>gi|393235424|gb|EJD42979.1| FMN-linked oxidoreductase [Auricularia delicata TFB-10046 SS5]
Length = 344
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF--LH-HLVFMCDKLLSSQEKDQ 57
MAARGLL NP LF G P + IE ++ + + + F +H H+ FM + LS
Sbjct: 256 MAARGLLANPALFCGHACAPDAAIERFMHLAIGYGLQFGLIHRHIAFMLESRLSRPGMKY 315
Query: 58 LNSLYSGVEILDFIEN 73
LNSL S +LDF+E+
Sbjct: 316 LNSLVSTAGLLDFLED 331
>gi|339255866|ref|XP_003370676.1| dihydrouridine synthase (Dus) superfamily [Trichinella spiralis]
gi|316965778|gb|EFV50452.1| dihydrouridine synthase (Dus) superfamily [Trichinella spiralis]
Length = 787
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVS----MKHNH-----------FMTFLHHLVFM 45
M AR LL+NP LF+GA++TP C WVS M+ N F F H+ FM
Sbjct: 196 MVARALLENPALFTGADKTPADCFFHWVSMNVQMEKNQTYDFCQADNVPFTRFHRHISFM 255
Query: 46 CDKLLSSQEKDQLNSLYSGVEILDFI 71
+K L+ ++ +L + ++ F+
Sbjct: 256 LEKSLNKSQRAELAEIRDSNQLFTFV 281
>gi|308485393|ref|XP_003104895.1| hypothetical protein CRE_24419 [Caenorhabditis remanei]
gi|308257216|gb|EFP01169.1| hypothetical protein CRE_24419 [Caenorhabditis remanei]
Length = 304
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MAA GLL NP LF+G TP C+E ++ + H + +L HL +M LS+Q++
Sbjct: 224 MAANGLLDNPALFAGYEYTPSDCVEHFMRLSREHGLDWLLYHQHLQYMLRPSLSAQQRRV 283
Query: 58 LNSLYSGVEILDFIEN 73
N L + I F+ N
Sbjct: 284 FNELNGRLAIDQFLNN 299
>gi|430813401|emb|CCJ29241.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 313
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV--SMKHN-HFMTFLHHLVFMCDKLLSSQEKDQ 57
M++RG+L NP LFSG + P S IE ++ S+ + +F F H++ M K+L+ ++
Sbjct: 224 MSSRGILFNPALFSGFDSCPWSAIERFIEYSLSYGLNFHLFQQHILKMMGKILNKKDSVD 283
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVN 87
L+ V ILD+I+ +F ++ P F N
Sbjct: 284 LSKQIGIVGILDWIDERFVLRRPGEPGFGN 313
>gi|332022244|gb|EGI62559.1| tRNA-dihydrouridine synthase 4-like protein [Acromyrmex echinatior]
Length = 745
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV---SMKHNHFMTFLHHLVFM 45
M+ARG+L NP LFSG TP+ C+++W+ S F F HHLVF+
Sbjct: 224 MSARGILTNPALFSGYPVTPLVCVQDWLDITSTMSTEFQCFQHHLVFI 271
>gi|347968560|ref|XP_312125.4| AGAP002791-PA [Anopheles gambiae str. PEST]
gi|333467945|gb|EAA07861.4| AGAP002791-PA [Anopheles gambiae str. PEST]
Length = 412
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLSSQEK 55
M ARG+L NP LF+G + TP+ C++ W+++ + HH FM + LL+ + +
Sbjct: 233 MTARGILSNPALFAGHSSTPVECVKRWLNICQQADTDITYQCMHHHFSFMTESLLTKRLR 292
Query: 56 DQLNSLYSGVE-ILDFIENKFHVQSPCRSHFVNLNKGSKYEEE 97
+LN+L + + +FI+ P ++ G +Y E+
Sbjct: 293 YELNNLSKEKQKVYEFIQTHL----PLDGVVDDVGSGRQYPEK 331
>gi|347968562|ref|XP_003436246.1| AGAP002791-PB [Anopheles gambiae str. PEST]
gi|347968564|ref|XP_003436247.1| AGAP002791-PC [Anopheles gambiae str. PEST]
gi|333467946|gb|EGK96765.1| AGAP002791-PB [Anopheles gambiae str. PEST]
gi|333467947|gb|EGK96766.1| AGAP002791-PC [Anopheles gambiae str. PEST]
Length = 362
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLSSQEK 55
M ARG+L NP LF+G + TP+ C++ W+++ + HH FM + LL+ + +
Sbjct: 183 MTARGILSNPALFAGHSSTPVECVKRWLNICQQADTDITYQCMHHHFSFMTESLLTKRLR 242
Query: 56 DQLNSLYSGVE-ILDFIENKFHVQSPCRSHFVNLNKGSKYEEE 97
+LN+L + + +FI+ P ++ G +Y E+
Sbjct: 243 YELNNLSKEKQKVYEFIQTHL----PLDGVVDDVGSGRQYPEK 281
>gi|294655199|ref|XP_002770100.1| DEHA2B07942p [Debaryomyces hansenii CBS767]
gi|199429763|emb|CAR65470.1| DEHA2B07942p [Debaryomyces hansenii CBS767]
Length = 364
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MA RG+L NPGLF G TP S +E + + ++ + F HHL M DK++ + +
Sbjct: 259 MAVRGILSNPGLFGGYENTPWSAVEIFWDLATSYGLPFRITQHHLSEMLDKVIPRKYLKE 318
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHF 85
+N V+++D+ + F ++ + F
Sbjct: 319 MNETTCLVDLIDWFDKVFVLRRKTDASF 346
>gi|312079658|ref|XP_003142269.1| tRNA-dihydrouridine synthase 4 [Loa loa]
gi|307762565|gb|EFO21799.1| tRNA-dihydrouridine synthase 4 [Loa loa]
Length = 333
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+A GLL+NP +F+G TP C+ +WV + + F F L+FM +S+++
Sbjct: 241 MSANGLLENPAMFAGYTSTPKQCVADWVRLATEYGCPFDLFHQQLMFMLRSSFTSRQRIV 300
Query: 58 LNSLYSGVEILDFI 71
N L S + D++
Sbjct: 301 FNGLSSHPAVFDYL 314
>gi|406602283|emb|CCH46121.1| tRNA-dihydrouridine synthase [Wickerhamomyces ciferrii]
Length = 340
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MA RG+L NP LF+G + P CIE++ ++ +T+ HHL M D + + +
Sbjct: 237 MAVRGILDNPALFAGYEKAPWGCIEKFWEYSTSYGLTYRLLQHHLSCMLDGRIPKELYKE 296
Query: 58 LNSLYSGVEILDFIENKF 75
+ + + +++DF +N F
Sbjct: 297 MMDIKTLAQLIDFFDNNF 314
>gi|118082096|ref|XP_001231946.1| PREDICTED: tRNA-dihydrouridine synthase 4-like isoform 2 [Gallus
gallus]
Length = 301
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 15 GANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQLNSLYSGVEILDFI 71
G TP+ CI++WV + H F F HHL++M +++ S QEK N L S +LD++
Sbjct: 234 GYEETPLKCIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKKVFNILSSTSAVLDYL 293
Query: 72 ENKFHVQS 79
+ + V S
Sbjct: 294 GHHYGVCS 301
>gi|452839637|gb|EME41576.1| hypothetical protein DOTSEDRAFT_73865 [Dothistroma septosporum
NZE10]
Length = 338
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---WVSMKHNHFMTFLHHLVFMCDKL--LSSQEK 55
MAARG+L+NP LF+G TP C+ + W + LHH+ M ++ ++ +EK
Sbjct: 254 MAARGMLENPALFAGYQATPPQCVHDFMNWAVKCPIPYPLVLHHIGEMTARMPGMTKKEK 313
Query: 56 DQLNSLYSGVEILDFIENKFHVQ 78
L + ++++D++E+ F Q
Sbjct: 314 KHLMACKDLLDLIDYVEDTFDQQ 336
>gi|150866685|ref|XP_001386359.2| dihydrouridine synthase [Scheffersomyces stipitis CBS 6054]
gi|149387941|gb|ABN68330.2| dihydrouridine synthase [Scheffersomyces stipitis CBS 6054]
Length = 369
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LF+G +TP + +E + + ++ + F HHL M DK++ + +
Sbjct: 264 MSARGILSNPALFAGYKKTPWAAVEFFWDLATSYGLPFRIIQHHLSEMLDKVIPRKSLKE 323
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKGSKYEEESEGKFFQEEMSSV 110
+N ++++D+ + F ++ +KG E K +EE + +
Sbjct: 324 MNETTCLIDMIDWFDTHFILKR-------RGDKGFATATEPSWKINREEAAHI 369
>gi|25144369|ref|NP_498078.2| Protein C45G9.2 [Caenorhabditis elegans]
gi|21431919|sp|Q09504.2|YQI2_CAEEL RecName: Full=Uncharacterized tRNA-dihydrouridine synthase-like
protein C45G9.2
gi|351059809|emb|CCD67391.1| Protein C45G9.2 [Caenorhabditis elegans]
Length = 284
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MAA GLL NP LF+G TP C+E ++ + + + +L HL +M + S+Q++
Sbjct: 205 MAANGLLDNPALFAGHEHTPSDCVENFMRLSREYGLDWLLYHQHLQYMLRPVFSAQQRRV 264
Query: 58 LNSLYSGVEILDFIENKFHV 77
N L + I F+ N +
Sbjct: 265 FNELNGRLAIDHFLNNLLDI 284
>gi|366999164|ref|XP_003684318.1| hypothetical protein TPHA_0B02120 [Tetrapisispora phaffii CBS 4417]
gi|357522614|emb|CCE61884.1| hypothetical protein TPHA_0B02120 [Tetrapisispora phaffii CBS 4417]
Length = 350
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-WVSMKHNHFMTF---LHHLVFMCDKL-LSSQEK 55
MA RGLL+NP LFSG R P CIE W + F HHL M + + LS
Sbjct: 249 MAVRGLLENPALFSGYGRCPWGCIERFWYRTIEYTCLPFQLTQHHLFCMLENMQLSKSLL 308
Query: 56 DQLNSLYSGVEILDFIENKFHVQ 78
+L S S E+LD+ E+ F ++
Sbjct: 309 KELMSTKSLPEMLDWFEDNFELK 331
>gi|195345007|ref|XP_002039067.1| GM17321 [Drosophila sechellia]
gi|194134197|gb|EDW55713.1| GM17321 [Drosophila sechellia]
Length = 316
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 1 MAARGLLKNPGLFSGA----NRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ + TP+SC+++W+ + F F HHL FM +
Sbjct: 238 MAARGLLANPALFNSSYPEGKTTPLSCVQQWLDIASAARDNLLFQCFHHHLTFMYSAHMK 297
Query: 52 SQEKDQLNSL 61
+ Q NSL
Sbjct: 298 RDLRVQFNSL 307
>gi|345327857|ref|XP_001509341.2| PREDICTED: B-cell receptor-associated protein 29-like
[Ornithorhynchus anatinus]
Length = 256
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFLHHLVFM 45
M ARGLL NP +F+G TP+ CI +WV + H F +F+
Sbjct: 12 MVARGLLANPAMFAGYEETPLKCIRDWVDVSLEHGSPFTWQKIFL 56
>gi|260943748|ref|XP_002616172.1| hypothetical protein CLUG_03413 [Clavispora lusitaniae ATCC 42720]
gi|238849821|gb|EEQ39285.1| hypothetical protein CLUG_03413 [Clavispora lusitaniae ATCC 42720]
Length = 367
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MA RG+L NP LFSG R P +E + + ++ + F HHL M ++L+S + +
Sbjct: 254 MAVRGILANPALFSGRARPPWGAVEHFFDLAASYGLPFRVAQHHLAQMMEQLVSRRYLRE 313
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
+ V+++++ + +F ++
Sbjct: 314 FGDISCWVDMVEWFDQRFDLK 334
>gi|328851127|gb|EGG00285.1| hypothetical protein MELLADRAFT_93719 [Melampsora larici-populina
98AG31]
Length = 321
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSS-QEKD 56
M+ARGL +NP LF+G R P+S ++ ++++ F + HL M +S +E+
Sbjct: 229 MSARGLQENPALFAGYERIPLSGVQRFITISAQTGFIFPLYHRHLADMLGNWFTSKEERK 288
Query: 57 QLNSLYSGVEILDFIENKFHVQSPCRSHFVN 87
N L S +L+F+E+ + + +P +N
Sbjct: 289 YFNLLSSPASVLEFLEDTYDI-TPGPFPIIN 318
>gi|241955235|ref|XP_002420338.1| tRNA-dihydrouridine synthase, putative [Candida dubliniensis CD36]
gi|223643680|emb|CAX41413.1| tRNA-dihydrouridine synthase, putative [Candida dubliniensis CD36]
Length = 340
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LF+G N+TP S +E ++ + + + + +HL + + ++ +
Sbjct: 238 MSARGVLANPALFTGLNKTPWSAVEMFLHLVTAYGLPYKLAQYHLAKLVEDVIPRKYVKA 297
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
+N + V+I+D+++ F ++
Sbjct: 298 INEKRNMVDIIDYLDEHFDLK 318
>gi|167519230|ref|XP_001743955.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777917|gb|EDQ91533.1| predicted protein [Monosiga brevicollis MX1]
Length = 328
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVS---MKHNHFMTFLHHLVFMCDKLLSSQEKDQ 57
MAARGLL NPGLF G I +++ H HHL FM + ++ ++ +
Sbjct: 232 MAARGLLANPGLFEGGRYVSREVIGDFLGEALCTGLHTSLLQHHLNFMLEPIMGRADRQE 291
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
L S ++ F+E +F ++
Sbjct: 292 FGRLPSATAMMTFLEERFDIK 312
>gi|344231352|gb|EGV63234.1| dihydrouridine synthase [Candida tenuis ATCC 10573]
Length = 336
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-W-VSMKHN-HFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARG+L+NP LF+G ++TP +E W SM + F HHL M ++L++ + +
Sbjct: 239 MSARGVLQNPALFAGYDKTPWMAVELFWHYSMSYGLPFRIIQHHLSEMLHQILTNAKLKE 298
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
+N + + V+++D+ ++ F ++
Sbjct: 299 MNFINNLVDLMDWFDHNFDLK 319
>gi|190346080|gb|EDK38084.2| hypothetical protein PGUG_02182 [Meyerozyma guilliermondii ATCC
6260]
Length = 347
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MA RG+L NP LF+G P S +E + + ++ + F HHL M +K + + +
Sbjct: 242 MAVRGILANPALFAGYKSAPWSAVERFWDLATSYGLPFRIIQHHLSQMLEKKIPKKVLKE 301
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVN 87
+N S V+++D+ + F ++ ++F
Sbjct: 302 MNETTSLVDMIDWFDANFILRRKGDANFAT 331
>gi|171687269|ref|XP_001908575.1| hypothetical protein [Podospora anserina S mat+]
gi|170943596|emb|CAP69248.1| unnamed protein product [Podospora anserina S mat+]
Length = 192
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 14/88 (15%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDK--------- 48
M+AR LL NP LFSG N P +E +++ M F LHH+ MC
Sbjct: 97 MSARALLANPALFSGRNSCPWEAVEYFLNKTIKAPMPFKLVLHHINEMCSPGMGPSQKDK 156
Query: 49 --LLSSQEKDQLNSLYSGVEILDFIENK 74
LL+ QE+ +L + E++DF+E K
Sbjct: 157 VALLNKQERAELMKVGDMTELIDFLEEK 184
>gi|354544705|emb|CCE41431.1| hypothetical protein CPAR2_304200 [Candida parapsilosis]
Length = 344
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF----LHHLVFMCDKLLSSQEKD 56
M+ARG+L NP LF+G N+TP +E ++ + ++ + + H + FM + + +
Sbjct: 239 MSARGVLANPALFTGLNKTPWGAVEMFMHLTTSYGLPYKLSQYHVVQFMENMDIPRRIIK 298
Query: 57 QLNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKGSKYEEESEGK 101
++N S ++++D ++ F+V+ L KG E + K
Sbjct: 299 EINECKSMIDMIDLLDKYFYVKR-------KLEKGYATATEPQWK 336
>gi|156052667|ref|XP_001592260.1| hypothetical protein SS1G_06500 [Sclerotinia sclerotiorum 1980]
gi|154704279|gb|EDO04018.1| hypothetical protein SS1G_06500 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 342
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMCD---------- 47
M+ARGLL NP LF+G TP C++ + V + F +HHL MC
Sbjct: 246 MSARGLLSNPALFAGYVSTPWECVDVFLNCVVRQPIPFKLVVHHLSEMCGSVGDGGNAGK 305
Query: 48 KLLSSQEKDQLNSLYSGVEILDFIE 72
LL+ +E+ +L +E++DF++
Sbjct: 306 SLLNKEERMRLMECRDMIEVIDFMD 330
>gi|68478245|ref|XP_716864.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
gi|68478366|ref|XP_716804.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
gi|46438488|gb|EAK97818.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
gi|46438550|gb|EAK97879.1| potential tRNA dihydrouridine synthase [Candida albicans SC5314]
gi|238882442|gb|EEQ46080.1| tRNA-dihydrouridine synthase 4 [Candida albicans WO-1]
Length = 339
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LF+G ++TP S +E ++ + + + + +HL + + ++ +
Sbjct: 238 MSARGVLANPALFTGLDKTPWSAVEMFLHLVTAYGLPYKLAQYHLAKLMEDVIPRKYVKA 297
Query: 58 LNSLYSGVEILDFIENKFHVQ 78
+N + V+I+D+++ F ++
Sbjct: 298 INEKKNMVDIIDYLDEHFDLK 318
>gi|448531879|ref|XP_003870351.1| Dus4 protein [Candida orthopsilosis Co 90-125]
gi|380354705|emb|CCG24221.1| Dus4 protein [Candida orthopsilosis]
Length = 344
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 51/82 (62%), Gaps = 4/82 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDKL-LSSQEKD 56
M+ARG+L NP LF+G N+TP S IE ++ + ++ + + +H+V + + + + +
Sbjct: 239 MSARGVLANPALFTGLNKTPWSAIEMFMHLTTSYGIPYKLSQYHVVQLMENMDIPRRIIK 298
Query: 57 QLNSLYSGVEILDFIENKFHVQ 78
++N + ++I+D ++ F+++
Sbjct: 299 EINESKNMIDIIDLLDKYFYLK 320
>gi|366997432|ref|XP_003678478.1| hypothetical protein NCAS_0J01610 [Naumovozyma castellii CBS 4309]
gi|342304350|emb|CCC72140.1| hypothetical protein NCAS_0J01610 [Naumovozyma castellii CBS 4309]
Length = 344
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-W---VSMKHNHFMTFLHHLVFMCDKLLSSQE-- 54
MA RG+L NP LF+G ++ P SCIE W + + HHL M + + S++
Sbjct: 246 MAVRGILANPALFAGYDKCPWSCIERFWYYAIEFGGLPYQLIQHHLFCMLENMNISKDLI 305
Query: 55 KDQLNSLYSGVEILDFIENKFHVQSPCRSHF 85
K+ +N+ S ++LD+ ++ F+++ S+F
Sbjct: 306 KEMMNA-KSLPQLLDWFDDHFYLKRYTDSNF 335
>gi|290982534|ref|XP_002673985.1| predicted protein [Naegleria gruberi]
gi|284087572|gb|EFC41241.1| predicted protein [Naegleria gruberi]
Length = 427
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW----VSMKHNHFMTFLHHLVFMC---DKLLSSQ 53
M+ARGLL NP LFSG + P CI+ + + + F HH++FM + LS+
Sbjct: 343 MSARGLLSNPALFSGYDYVPFECIQRYLQIAIQIGGVPFHILQHHIMFMLYSHHQFLSA- 401
Query: 54 EKDQLNSLYSGVEILDFIENK 74
+ + + S ILDF E +
Sbjct: 402 DVIEFSECTSVASILDFFEER 422
>gi|296411986|ref|XP_002835709.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629498|emb|CAZ79866.1| unnamed protein product [Tuber melanosporum]
Length = 459
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH----FMTFLHHLVFMCDKLLSSQEKD 56
MAARGL++NP LF+G +TP +E ++ N+ + LH++ M +++ +E+
Sbjct: 242 MAARGLMENPALFAGFKKTPWGAVERFLHYNANYGPLPYQLALHNVGEMLRDMMTKKERA 301
Query: 57 QLN-SLYSGVEILDFIENKFHVQSPCRSHFVNLNKGSKYEE 96
++ + S VEIL++++ + + RS + KGSK E
Sbjct: 302 EMTRNSGSIVEILNWLKQRGIGRIYARSR---VWKGSKNGE 339
>gi|146421120|ref|XP_001486511.1| hypothetical protein PGUG_02182 [Meyerozyma guilliermondii ATCC
6260]
Length = 347
Score = 46.2 bits (108), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
MA RG+L NP LF+G P S +E + + ++ + F HHL M +K + + +
Sbjct: 242 MAVRGILANPALFAGYKSAPWSAVERFWDLATSYGLPFRIIQHHLSQMLEKKIPKKVLKE 301
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVN 87
+N V+++D+ + F ++ ++F
Sbjct: 302 MNETTLLVDMIDWFDANFILRRKGDANFAT 331
>gi|344301622|gb|EGW31927.1| dihydrouridine synthase [Spathaspora passalidarum NRRL Y-27907]
Length = 346
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL---HHLVFMCDKLLSSQEKDQ 57
M+ARG+LKNP LF+G + P IE ++ + + + F HH M + ++ Q +
Sbjct: 241 MSARGVLKNPALFAGYEKAPWGAIEMFMHLCTAYGLPFRVAQHHFSEMLEDIIPRQYVKE 300
Query: 58 LNSLYSGVEILDFIENKF 75
+N ++++D+ + F
Sbjct: 301 MNETTCMIDLIDWFDRYF 318
>gi|71013186|ref|XP_758561.1| hypothetical protein UM02414.1 [Ustilago maydis 521]
gi|46098219|gb|EAK83452.1| hypothetical protein UM02414.1 [Ustilago maydis 521]
Length = 477
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN-------HFMTFLHHLVFMCDKLLSSQ 53
M+ARGLL NP LFSG N+TP E V + H H HL +M + S+
Sbjct: 349 MSARGLLANPALFSGYNQTP----PEAVGLFHKIATSWGLHTGLIQRHLAYMLEGSFQSR 404
Query: 54 -EKDQLNSLYSGVEILDFI 71
E NSL G ++D++
Sbjct: 405 AEAIHFNSLSGGASMMDYL 423
>gi|398406519|ref|XP_003854725.1| hypothetical protein MYCGRDRAFT_37404, partial [Zymoseptoria
tritici IPO323]
gi|339474609|gb|EGP89701.1| hypothetical protein MYCGRDRAFT_37404 [Zymoseptoria tritici IPO323]
Length = 298
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIE---EWVSMKHNHFMTFLHHLVFMCDKL--LSSQEK 55
MAARG+L+NP +F+ + +P+ C + EW F LHH+ + ++ ++ +EK
Sbjct: 215 MAARGILENPAMFADHDVSPVECAKDFIEWAIRCPIPFPLVLHHVGEITARMPGMNKKEK 274
Query: 56 DQLNSLYSGVEILDFIENKF 75
L +E++DFI++++
Sbjct: 275 KVLQECQDLMELVDFIDDRW 294
>gi|347832110|emb|CCD47807.1| similar to tRNA-dihydrouridine synthase 4-like [Botryotinia
fuckeliana]
Length = 331
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMC----------D 47
M+ARGLL+NP LF+G TP C++ +++ + F +HHL MC +
Sbjct: 239 MSARGLLENPALFAGYASTPWECVDVFMNQVLKQPIPFKLVVHHLSEMCGTDRSQNGGNN 298
Query: 48 KLLSSQEKDQLNSLYSGVEILDFIE 72
LL +E+ +L V+++D ++
Sbjct: 299 GLLGKEERMRLMECRDMVDVIDLMD 323
>gi|255732059|ref|XP_002550953.1| tRNA-dihydrouridine synthase 4 [Candida tropicalis MYA-3404]
gi|240131239|gb|EER30799.1| tRNA-dihydrouridine synthase 4 [Candida tropicalis MYA-3404]
Length = 342
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 13/96 (13%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDKLLSSQEKDQ 57
M+ARG+L NP LF+G ++TP S +E ++ + + + + +H+ + + + +
Sbjct: 238 MSARGILANPALFTGLDKTPWSAVEMFMHLATAYGLPYKLAQYHVAHLLEDTIPKKYLKG 297
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKGSK 93
+N + V+++D+++ HFV KG K
Sbjct: 298 INEKLNMVDLIDYLD----------EHFVLKRKGEK 323
>gi|154314901|ref|XP_001556774.1| hypothetical protein BC1G_04792 [Botryotinia fuckeliana B05.10]
Length = 278
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMC----------D 47
M+ARGLL+NP LF+G TP C++ +++ + F +HHL MC +
Sbjct: 186 MSARGLLENPALFAGYASTPWECVDVFMNQVLKQPIPFKLVVHHLSEMCGTDRSQNGGNN 245
Query: 48 KLLSSQEKDQLNSLYSGVEILDFIE 72
LL +E+ +L V+++D ++
Sbjct: 246 GLLGKEERMRLMECRDMVDVIDLMD 270
>gi|322701572|gb|EFY93321.1| Dihydrouridine synthase [Metarhizium acridum CQMa 102]
Length = 354
Score = 45.1 bits (105), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMC------DK--L 49
M+ARGLL NP LF+G P +E + + F LHH+ M DK L
Sbjct: 256 MSARGLLANPALFAGHAACPWEAVETLMCKMARAPLPFKLALHHVQEMTGPGMGPDKRAL 315
Query: 50 LSSQEKDQLNSLYSGVEILDFIENK 74
L+ +E+ +LN+ S ++++DF++ K
Sbjct: 316 LNKRERAELNACESMLDLVDFLDTK 340
>gi|365991088|ref|XP_003672373.1| hypothetical protein NDAI_0J02380 [Naumovozyma dairenensis CBS 421]
gi|343771148|emb|CCD27130.1| hypothetical protein NDAI_0J02380 [Naumovozyma dairenensis CBS 421]
Length = 352
Score = 45.1 bits (105), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---WV-SMKHNHFMTFLHHLVFMCDKL-LSSQEK 55
MA RGLL NP LFSG + P SCIE WV + HH M + + L +
Sbjct: 251 MAVRGLLNNPALFSGYDICPWSCIENFWYWVIEFGGIPYQLIQHHFYCMLENMNLKKKLL 310
Query: 56 DQLNSLYSGVEILDFIENKFHVQ 78
+++ + S V+++D+ ++ F ++
Sbjct: 311 NEMMEIKSLVQLMDWFDDNFELK 333
>gi|443897380|dbj|GAC74721.1| tRNA-dihydrouridine synthase [Pseudozyma antarctica T-34]
Length = 465
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQ-EKD 56
M+ARGLL NP LFSG ++TP +E + S+ + H HL +M + S+ E
Sbjct: 338 MSARGLLANPALFSGYDQTPDEAVELFHSLATSWGLHTALIHRHLAYMLEASFQSRAEAV 397
Query: 57 QLNSLYSGVEILDFIENK 74
NSL + D++ ++
Sbjct: 398 YFNSLSGAAALTDYLADQ 415
>gi|322705649|gb|EFY97233.1| Dihydrouridine synthase [Metarhizium anisopliae ARSEF 23]
Length = 339
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC------DK--L 49
M+ARGLL NP LF+G P +E V+ F LHH+ M DK L
Sbjct: 241 MSARGLLANPALFAGHAACPWEAVETLMCKVARAPLPFKLALHHVQEMTAPGMGPDKRAL 300
Query: 50 LSSQEKDQLNSLYSGVEILDFIENK 74
L+ +E+ +LN+ S ++++DF++ K
Sbjct: 301 LNKRERAELNACGSMLDLVDFLDAK 325
>gi|342890419|gb|EGU89237.1| hypothetical protein FOXB_00190 [Fusarium oxysporum Fo5176]
Length = 388
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC------DK--L 49
M+ARGLL NP +F+G + P +E + V+ F HH++ M DK L
Sbjct: 289 MSARGLLANPAIFAGYSACPWEAVETFMCKVAKAPVPFKLVQHHIMEMTAPGMGSDKASL 348
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
L +E+ +L L + EI+DF++ K
Sbjct: 349 LDKKERAELMKLTNTCEIMDFLDEKI 374
>gi|313235191|emb|CBY25064.1| unnamed protein product [Oikopleura dioica]
Length = 286
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NPGLF + EW + + ++ HL++M DK+ + E
Sbjct: 205 MVARGLLHNPGLFDDRRLGDPEVLTEWTKIALELGIPYSSYHKHLMYMLDKVTTRPETRV 264
Query: 58 LNSLYSGVEILDFIENKFHV 77
NSL S ++ + ++ + ++
Sbjct: 265 FNSLQSMLQAVSWLRERNYI 284
>gi|350296469|gb|EGZ77446.1| FMN-linked oxidoreductase [Neurospora tetrasperma FGSC 2509]
Length = 341
Score = 44.3 bits (103), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMC--------DKL 49
M+AR +L NP L++G + P +E ++S + F HHL MC + L
Sbjct: 241 MSARAILANPALYAGYDACPWEAVETFMSHLARAPLPFKLVQHHLSEMCAPGMGPNKNAL 300
Query: 50 LSSQEKDQLNSLYSGVEILDFIENK 74
LS E++ + S + V+++DF++ K
Sbjct: 301 LSKPERNAMLSCTNMVDLVDFLDEK 325
>gi|85117655|ref|XP_965295.1| hypothetical protein NCU03195 [Neurospora crassa OR74A]
gi|28927102|gb|EAA36059.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 341
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMC--------DKL 49
M+AR +L NP L++G + P +E ++S + F HHL MC + L
Sbjct: 241 MSARAILANPALYAGYDACPWEAVETFMSHLARAPLPFKLVQHHLSEMCAPGMGPNKNAL 300
Query: 50 LSSQEKDQLNSLYSGVEILDFIENK 74
LS E++ + S + V+++DF++ K
Sbjct: 301 LSKPERNAMLSCTNMVDLVDFLDEK 325
>gi|336464378|gb|EGO52618.1| hypothetical protein NEUTE1DRAFT_126097 [Neurospora tetrasperma
FGSC 2508]
Length = 341
Score = 44.3 bits (103), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMC--------DKL 49
M+AR +L NP L++G + P +E ++S + F HHL MC + L
Sbjct: 241 MSARAILANPALYAGYDACPWEAVETFMSHLARAPLPFKLVQHHLSEMCAPGMGPNKNAL 300
Query: 50 LSSQEKDQLNSLYSGVEILDFIENK 74
LS E++ + S + V+++DF++ K
Sbjct: 301 LSKPERNAMLSCTNMVDLVDFLDEK 325
>gi|149237573|ref|XP_001524663.1| tRNA-dihydrouridine synthase 4 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451260|gb|EDK45516.1| tRNA-dihydrouridine synthase 4 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 342
Score = 44.3 bits (103), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDKLLSSQEK-D 56
M+ARG+L NP LF G N+TP S +E ++ + + + + HH+ M + +L ++
Sbjct: 241 MSARGILANPALFQGFNQTPWSAVEVFMHLTTCYGLPYKLSQHHVAQMMENMLIPRKVIK 300
Query: 57 QLNSLYSGVEILDFIENKFHVQ 78
++N + ++++D ++ F+++
Sbjct: 301 EVNESKTMIDMIDTLDKYFYLK 322
>gi|400601446|gb|EJP69089.1| dihydrouridine synthase [Beauveria bassiana ARSEF 2860]
Length = 393
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDK--------L 49
M+ARGLL NP LF+G P +E ++ + +HH+ MC L
Sbjct: 293 MSARGLLANPALFAGYAACPWEAVERFMCRAARAPLPLKLAVHHVQEMCGPGLGPDRSAL 352
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
LS +E+ + E++DF+++K
Sbjct: 353 LSKRERQAFALMTDMTELVDFMDDKI 378
>gi|403214551|emb|CCK69052.1| hypothetical protein KNAG_0B06220 [Kazachstania naganishii CBS
8797]
Length = 345
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 16/97 (16%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV-----SMKHNHFMTFLHHLVFMCDKL-LSSQE 54
MAARGLL NP LFSG ++ P C+E ++ LHH+ M + + + +
Sbjct: 245 MAARGLLANPALFSGQDKCPWGCLERFLYHCSEVGDGLPIQLILHHVHCMLESMQVRKKL 304
Query: 55 KDQLNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKG 91
Q+ +L S +LD++E HFV L +G
Sbjct: 305 LKQIMNLESFAHLLDWLEK----------HFVLLREG 331
>gi|320168879|gb|EFW45778.1| tRNA-dihydrouridine synthase 4-like protein [Capsaspora owczarzaki
ATCC 30864]
Length = 432
Score = 43.9 bits (102), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQE 54
M+ARGLL NP LF G P SC+++W+ + + + F H++ M D + S+E
Sbjct: 291 MSARGLLANPALFGGYAFAPASCLDKWIQIALSSRIPYSLFHTHVMNMDDPRVLSKE 347
>gi|452977524|gb|EME77290.1| hypothetical protein MYCFIDRAFT_83236 [Pseudocercospora fijiensis
CIRAD86]
Length = 293
Score = 43.5 bits (101), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIE---EWVSMKHNHFMTFLHHLVFMCDKL--LSSQEK 55
MAARGL++NP +F+G P + +WV F LHH+ M K+ ++ +EK
Sbjct: 210 MAARGLMENPTMFAGYPIPPERSVGDLLQWVVRCPIPFPLVLHHVHEMTAKMEGMTKKEK 269
Query: 56 DQLNSLYSGVEILDFIENKFHVQ 78
+L ++++D +E K+ ++
Sbjct: 270 RRLMQCGDLMDLIDLVEEKWGLE 292
>gi|346320912|gb|EGX90512.1| dihydrouridine synthase 4-like protein [Cordyceps militaris CM01]
Length = 381
Score = 42.7 bits (99), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMC------DK--L 49
M+ARGLL NP LF+G P +E ++ + +HH+ MC DK L
Sbjct: 281 MSARGLLANPALFAGHAACPWEAVERFMVRAARAPLPVKHAVHHVQEMCGPGCGPDKSAL 340
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
LS +E+ + E++DF+++K
Sbjct: 341 LSKKERLAFARMTDMTELVDFLDDKI 366
>gi|380470167|emb|CCF47870.1| dihydrouridine synthase [Colletotrichum higginsianum]
Length = 392
Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVS--MKHNHFMTFL-HHLVFMC------DK--L 49
M+ARG+L NP L++G P +E ++ ++ + + HHL MC DK L
Sbjct: 284 MSARGILANPALYAGYESCPWEAVESFIRHVVRAPIPVKLVQHHLHEMCGPGMGPDKRAL 343
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKFHVQS 79
L+ QE+ L +L S ++++DF+++ + ++
Sbjct: 344 LNRQERAALLALDSMLDVIDFMDDAINRKT 373
>gi|428182359|gb|EKX51220.1| hypothetical protein GUITHDRAFT_66170 [Guillardia theta CCMP2712]
Length = 352
Score = 42.0 bits (97), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 22/28 (78%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV 28
MAARGLL NP +FSG ++TP C+ ++V
Sbjct: 213 MAARGLLVNPAMFSGYDQTPTECVNDYV 240
>gi|358395827|gb|EHK45214.1| hypothetical protein TRIATDRAFT_292756 [Trichoderma atroviride IMI
206040]
Length = 366
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC------DK--L 49
M+ARGLL NP LF+G + P +E + V+ +HH+ MC DK L
Sbjct: 267 MSARGLLANPALFAGHSSCPWETLETFMCNVARCPLPLKLVVHHVQEMCAPGMGGDKSAL 326
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
L+ +E+ +L + +++DF+++K
Sbjct: 327 LNKKERARLVEFTNMADLIDFLDDKM 352
>gi|340517407|gb|EGR47651.1| hypothetical protein TRIREDRAFT_71649 [Trichoderma reesei QM6a]
Length = 418
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC------DK--L 49
M+ARGLL NP LF+G R P +E + V+ +HH+ MC DK L
Sbjct: 319 MSARGLLANPALFAGHPRCPWEAVETFMCNVARCPLPLKLVVHHVQEMCGPGMGDDKTAL 378
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
L+ +E+ + +++DF++ K
Sbjct: 379 LNKKERASFVDFTNMADLIDFLDEKI 404
>gi|310790879|gb|EFQ26412.1| dihydrouridine synthase [Glomerella graminicola M1.001]
Length = 344
Score = 41.6 bits (96), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMT---FLHHLVFMC------DK--L 49
M+ARG+L NP L++G P +E ++ M HHL MC DK L
Sbjct: 236 MSARGILANPALYAGHESCPWEAVESFMRHVVRAPMPVKLVQHHLHEMCGPGMGPDKRAL 295
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKFHVQS 79
L+ QE+ L L + V+++DF+++ + ++
Sbjct: 296 LNRQERAALLGLDNMVDVIDFMDDAINRKT 325
>gi|358388764|gb|EHK26357.1| hypothetical protein TRIVIDRAFT_73721 [Trichoderma virens Gv29-8]
Length = 363
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC------DK--L 49
M+ARGLL NP LF+G + P +E + V+ +HH+ MC DK L
Sbjct: 265 MSARGLLANPALFAGHSACPWETLETFMCNVARCPLPLKLVVHHVQEMCAPGMGDDKSSL 324
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
L+ +E+ +L + +++DF++ K
Sbjct: 325 LNKKERAKLVDFTNMADLIDFLDEKI 350
>gi|388858440|emb|CCF48034.1| related to A.brasilense nifR3 protein [Ustilago hordei]
Length = 462
Score = 40.8 bits (94), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN---HFMTFLHHLVFMCDKLLSSQ-EKD 56
M+ARGLL NP LF+G ++TP + + + N H HL +M + S+ E
Sbjct: 332 MSARGLLANPALFAGEDKTPGEAVGFFFKVATNWGLHTGLIQRHLAYMLEGGFGSRAEAI 391
Query: 57 QLNSLYSGVEILDFIE 72
NSL + D+++
Sbjct: 392 YFNSLSGMASMTDYLD 407
>gi|410075141|ref|XP_003955153.1| hypothetical protein KAFR_0A05830 [Kazachstania africana CBS 2517]
gi|372461735|emb|CCF56018.1| hypothetical protein KAFR_0A05830 [Kazachstania africana CBS 2517]
Length = 336
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH----FMTFLHHLVFM 45
M+ARG+L NP LF G P C+E ++ + H F HHL M
Sbjct: 233 MSARGILSNPALFDGYKTCPWKCVERFMYIVTEHGALPFALIQHHLYCM 281
>gi|151940924|gb|EDN59306.1| dihydrouridine synthase [Saccharomyces cerevisiae YJM789]
gi|256269148|gb|EEU04483.1| Dus4p [Saccharomyces cerevisiae JAY291]
Length = 367
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---W-VSMKHNHFMTFLHHLVFMCD--KLLSSQE 54
MA RGLL NP LF+G P CIE+ W + F HHL M + +L S
Sbjct: 253 MAVRGLLSNPALFAGYTTCPWGCIEKFCYWALEFGGLPFQLTQHHLYCMLENMELKKSLL 312
Query: 55 KDQLNSLYSGVEILDFIENKF 75
K+ +N L + + ++D+ + F
Sbjct: 313 KEMMN-LKNYISLIDWFDKTF 332
>gi|50294732|ref|XP_449777.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529091|emb|CAG62755.1| unnamed protein product [Candida glabrata]
Length = 344
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-WVSMKHNHFMTFL---HHLVFMCDKL-LSSQEK 55
MA RG+L NP LF+G ++ P C+E W + + F HHL M + + + +
Sbjct: 244 MAVRGVLANPALFAGHDKCPWGCVEWFWYWTTEYNTLPFALTQHHLYCMLENMGIRRKLL 303
Query: 56 DQLNSLYSGVEILDFIENKF 75
++ S E+LD+ + F
Sbjct: 304 KEMMLQRSYPELLDWFDTNF 323
>gi|323303732|gb|EGA57518.1| Dus4p [Saccharomyces cerevisiae FostersB]
gi|323307899|gb|EGA61159.1| Dus4p [Saccharomyces cerevisiae FostersO]
gi|349580100|dbj|GAA25261.1| K7_Dus4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 367
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---W-VSMKHNHFMTFLHHLVFMCD--KLLSSQE 54
MA RGLL NP LF+G P CIE+ W + F HHL M + +L S
Sbjct: 253 MAVRGLLSNPALFAGYTTCPWGCIEKFCYWALEFGGLPFQLTQHHLYCMLENMELKKSLL 312
Query: 55 KDQLNSLYSGVEILDFIENKF 75
K+ +N L + + ++D+ + F
Sbjct: 313 KEMMN-LKNYISLIDWFDKTF 332
>gi|373130098|gb|AEY62539.1| NifR3-like protein [Ustanciosporium gigantosporum]
Length = 488
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 4/83 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH-FMTFL--HHLVFMCDKLLSSQ-EKD 56
M+ARGLL NP LFSG TP + + +M +T L HL +M + S+ E
Sbjct: 345 MSARGLLANPALFSGHQNTPPEAVAFFHTMATKWGLVTALVQRHLAYMLESSFQSRSEAI 404
Query: 57 QLNSLYSGVEILDFIENKFHVQS 79
NSL + D++ + ++ +
Sbjct: 405 HFNSLSGAAALTDWLAEQGYLPT 427
>gi|444314569|ref|XP_004177942.1| hypothetical protein TBLA_0A06320 [Tetrapisispora blattae CBS 6284]
gi|387510981|emb|CCH58423.1| hypothetical protein TBLA_0A06320 [Tetrapisispora blattae CBS 6284]
Length = 349
Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWV--SMKHNH---FMTFLHHLVFMCDKLLSSQE- 54
M+ RG+L NP LF + P CIE ++ S ++N+ F F HHL M + ++ +
Sbjct: 245 MSVRGVLANPSLFENHLKCPWGCIEIFINWSFEYNNGIPFQLFQHHLFCMMENMMIPKHL 304
Query: 55 KDQLNSLYSGVEILDFIENKF 75
QL + +++D+I+ F
Sbjct: 305 IKQLMETRTYSQLIDWIDETF 325
>gi|323353727|gb|EGA85583.1| Dus4p [Saccharomyces cerevisiae VL3]
Length = 115
Score = 39.7 bits (91), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---W-VSMKHNHFMTFLHHLVFMCD--KLLSSQE 54
MA RGLL NP LF+G P CIE+ W + F HHL M + +L S
Sbjct: 1 MAVRGLLSNPALFAGYTTCPWGCIEKFCYWALEFGGLPFQLAQHHLYCMLENMELKKSLL 60
Query: 55 KDQLNSLYSGVEILDFIENKF 75
K+ +N L + + ++D+ F
Sbjct: 61 KEMMN-LKNYISLIDWFNKTF 80
>gi|190405444|gb|EDV08711.1| dihydrouridine synthase 4 [Saccharomyces cerevisiae RM11-1a]
gi|259148383|emb|CAY81630.1| Dus4p [Saccharomyces cerevisiae EC1118]
gi|323332436|gb|EGA73845.1| Dus4p [Saccharomyces cerevisiae AWRI796]
gi|323336419|gb|EGA77687.1| Dus4p [Saccharomyces cerevisiae Vin13]
gi|323347323|gb|EGA81596.1| Dus4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365764193|gb|EHN05718.1| Dus4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 367
Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---W-VSMKHNHFMTFLHHLVFMCD--KLLSSQE 54
MA RGLL NP LF+G P CIE+ W + F HHL M + +L S
Sbjct: 253 MAVRGLLSNPALFAGYTTCPWGCIEKFCYWALEFGGLPFQLAQHHLYCMLENMELKKSLL 312
Query: 55 KDQLNSLYSGVEILDFIENKF 75
K+ +N L + + ++D+ F
Sbjct: 313 KEMMN-LKNYISLIDWFNKTF 332
>gi|156847371|ref|XP_001646570.1| hypothetical protein Kpol_1055p69 [Vanderwaltozyma polyspora DSM
70294]
gi|156117248|gb|EDO18712.1| hypothetical protein Kpol_1055p69 [Vanderwaltozyma polyspora DSM
70294]
Length = 346
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-W---VSMKHNHFMTFLHHLVFMCDKL-LSSQEK 55
MA RGLL NP LF+ + P C+E+ W + F HHL M + + L
Sbjct: 245 MAVRGLLANPALFAKYDVCPWGCLEKFWYWAMEFSTLPFQLLQHHLFCMLENMQLQKPLL 304
Query: 56 DQLNSLYSGVEILDFIENKF 75
++ +L + V+++D+ + F
Sbjct: 305 KEMMTLKNTVQLIDWFDKNF 324
>gi|254579030|ref|XP_002495501.1| ZYRO0B12826p [Zygosaccharomyces rouxii]
gi|238938391|emb|CAR26568.1| ZYRO0B12826p [Zygosaccharomyces rouxii]
Length = 348
Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-W---VSMKHNHFMTFLHHLVFMCDKL-LSSQEK 55
MA RG+L NP LFSG P SC+E W + + HHL M + + +
Sbjct: 248 MAVRGVLSNPALFSGFKTCPWSCVEWFWYYTLEFGGLPYQLLQHHLYCMLENMEVPRNLI 307
Query: 56 DQLNSLYSGVEILDFIENKFHVQ 78
+L + E+LD+ + F ++
Sbjct: 308 KELMDVKGTAELLDWFGDHFELK 330
>gi|440635483|gb|ELR05402.1| hypothetical protein GMDG_07385 [Geomyces destructans 20631-21]
Length = 343
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC-------DKLL 50
M+AR +L NP LF+G + P +E + V F LHHL M LL
Sbjct: 254 MSARDILANPALFAGHDACPWEAVEHFMNRVVRAPIPFKLVLHHLSQMTGSAGGGKPALL 313
Query: 51 SSQEKDQLNSLYSGVEILDFIEN 73
+E+ L +E++DF++
Sbjct: 314 GKEERGGLMECRDMIEVIDFLDR 336
>gi|6323437|ref|NP_013509.1| Dus4p [Saccharomyces cerevisiae S288c]
gi|2833204|sp|Q06063.1|DUS4_YEAST RecName: Full=tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+];
AltName: Full=tRNA-dihydrouridine synthase 4
gi|625099|gb|AAB82341.1| Ylr405wp [Saccharomyces cerevisiae]
gi|45271062|gb|AAS56912.1| YLR405W [Saccharomyces cerevisiae]
gi|285813808|tpg|DAA09704.1| TPA: Dus4p [Saccharomyces cerevisiae S288c]
gi|392297906|gb|EIW09005.1| Dus4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 367
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE---W-VSMKHNHFMTFLHHLVFMCDKL-LSSQEK 55
MA RGLL NP LF+G P CIE+ W + F HHL M + + L
Sbjct: 253 MAVRGLLSNPALFAGYTTCPWGCIEKFCYWALEFGGLPFQLAQHHLYCMLENMELKKSLL 312
Query: 56 DQLNSLYSGVEILDFIENKF 75
++ +L + + ++D+ F
Sbjct: 313 KKMMNLKNYISLIDWFNKTF 332
>gi|373130076|gb|AEY62519.1| NifR3-like protein [Ustanciosporium gigantosporum]
Length = 488
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN-HFMTFL--HHLVFMCDKLLSSQ-EKD 56
M+ARGLL NP LFSG TP + + +M +T L H+ +M + S+ E
Sbjct: 345 MSARGLLANPALFSGHQNTPPEAVAFFHTMATKWGLVTALVQRHVAYMLESSFQSRSEAI 404
Query: 57 QLNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKGSK 93
NSL + D++ + ++ + S L++G +
Sbjct: 405 HFNSLSGAAALTDWLAEQGYLPTSTISS-TGLHRGQR 440
>gi|429859913|gb|ELA34669.1| putative trna dihydrouridine synthase [Colletotrichum
gloeosporioides Nara gc5]
Length = 357
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL-----HHLVFMC------DK- 48
M+ARG+L NP +++G P +E + M+H HHL M DK
Sbjct: 249 MSARGILANPAMYAGYEACPWEAVESF--MRHVIRAPIPVKLVQHHLHEMVGPGMGPDKK 306
Query: 49 -LLSSQEKDQLNSLYSGVEILDFIENKFHVQS 79
LL QE+ L L S ++++DF+++ + ++
Sbjct: 307 ALLDKQERAALQRLDSMIDVIDFMDDAINRKT 338
>gi|408400309|gb|EKJ79392.1| hypothetical protein FPSE_00434 [Fusarium pseudograminearum CS3096]
Length = 388
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC------DK--L 49
M+ARGLL NP + +G + P +E + V+ F HH++ M DK L
Sbjct: 289 MSARGLLANPAICTGYSACPWEAVETFMCKVARAPVPFKLVQHHVMEMTAPGMGPDKTSL 348
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
L +E+ ++ L + EI+D+++ K
Sbjct: 349 LEKKERAEIMKLTNTCEIVDYLDEKI 374
>gi|401840063|gb|EJT42985.1| DUS4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 401
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-W---VSMKHNHFMTFLHHLVFM 45
MA RGLL NP LF+G + P CIE+ W + F HHL M
Sbjct: 285 MAVRGLLSNPALFAGYDTCPWGCIEKFWYWALEFGGLPFQLTQHHLYCM 333
>gi|46108752|ref|XP_381434.1| hypothetical protein FG01258.1 [Gibberella zeae PH-1]
Length = 362
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEW---VSMKHNHFMTFLHHLVFMC------DK--L 49
M+ARGLL NP + +G + P +E + V+ F HH++ M DK L
Sbjct: 263 MSARGLLANPAICAGYSACPWEAVETFMCKVARAPVPFKLVQHHVMEMTAPGMGPDKTSL 322
Query: 50 LSSQEKDQLNSLYSGVEILDFIENKF 75
L +E+ ++ L + EI+D+++ K
Sbjct: 323 LEKKERGEIMKLNNTCEIVDYLDEKI 348
>gi|367014111|ref|XP_003681555.1| hypothetical protein TDEL_0E01010 [Torulaspora delbrueckii]
gi|359749216|emb|CCE92344.1| hypothetical protein TDEL_0E01010 [Torulaspora delbrueckii]
Length = 349
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE-W---VSMKHNHFMTFLHHLVFMCDKL-LSSQEK 55
MA RGLL NP LF+G P C+E+ W + + HHL M + + L
Sbjct: 249 MAVRGLLANPALFAGYETCPWGCVEKFWYYTLEFGGLPYQLLQHHLYCMLENMKLEKNLL 308
Query: 56 DQLNSLYSGVEILDFIENKF 75
++ + + ++D+ E F
Sbjct: 309 KEMMDVKNTAALIDWFETNF 328
>gi|302414912|ref|XP_003005288.1| tRNA-dihydrouridine synthase [Verticillium albo-atrum VaMs.102]
gi|261356357|gb|EEY18785.1| tRNA-dihydrouridine synthase [Verticillium albo-atrum VaMs.102]
Length = 343
Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 33/94 (35%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFLHHLVF--------------MC 46
M+ARG+L NP L++G P +E FL HL MC
Sbjct: 230 MSARGILANPALYAGHESCPWQAVE-----------AFLRHLTRAPLHLKLVLHHLGEMC 278
Query: 47 --------DKLLSSQEKDQLNSLYSGVEILDFIE 72
+ LL+ E+ QLN++ + +++DF++
Sbjct: 279 GPGMGPDKNALLTKGERAQLNAMTNMCDVIDFMD 312
>gi|363750684|ref|XP_003645559.1| hypothetical protein Ecym_3249 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889193|gb|AET38742.1| Hypothetical protein Ecym_3249 [Eremothecium cymbalariae
DBVPG#7215]
Length = 352
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIE--EWVSMKHN--HFMTFLHHLVFMCDKL-LSSQEK 55
MAARGLL NP LFSG P +E + +M+ F LHHL M + + +
Sbjct: 248 MAARGLLANPALFSGYVNCPWKAVELFWYYTMEFGGLPFQILLHHLHCMLEDMNIDKGLL 307
Query: 56 DQLNSLYSGVEILDFIENKF 75
++ + S E++D+ + F
Sbjct: 308 KEMMLMRSTSELIDWFDKYF 327
>gi|427817422|ref|ZP_18984485.1| putative asparagine synthetase [Bordetella bronchiseptica D445]
gi|410568422|emb|CCN16460.1| putative asparagine synthetase [Bordetella bronchiseptica D445]
Length = 631
Score = 37.0 bits (84), Expect = 5.3, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 37 TFLHHLVFMCDKLLSSQEKDQLNSLYSGVEILDFIENKFHVQSPCRSHFVNLNKGSKYEE 96
TFLH L+ + DKL + L S V LD F Q P R NL K E
Sbjct: 458 TFLHGLLVVEDKL------SMAHGLESRVPFLDNDLVDFATQCPVRLKLNNLADVIKLNE 511
Query: 97 ESEG----KFFQEEMSSVKKQVAKDLMEDILDNCLSSQEKDQLN----SLYSGVEILDFI 148
G K+F++ KQ+ +D+M D + + ++ EK + S + G E +DF+
Sbjct: 512 NEPGHKTNKYFEKTRDG--KQILRDVMRDYIPSDIAQAEKQGFSAPDASWFKG-ESMDFV 568
Query: 149 E 149
+
Sbjct: 569 K 569
>gi|346979547|gb|EGY22999.1| dihydrouridine synthase [Verticillium dahliae VdLs.17]
Length = 348
Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 33/94 (35%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFLHHLVF--------------MC 46
M+ARG+L NP L++G P +E FL HL MC
Sbjct: 235 MSARGILANPALYAGHESCPWEAVE-----------AFLRHLARAPLHLKLVLHHLGEMC 283
Query: 47 --------DKLLSSQEKDQLNSLYSGVEILDFIE 72
+ LL+ E+ QLN++ + +++DF++
Sbjct: 284 GPGMGPDKNALLNKGERVQLNAMTNMCDVIDFMD 317
>gi|440473677|gb|ELQ42459.1| tRNA-dihydrouridine synthase 4 [Magnaporthe oryzae Y34]
gi|440486687|gb|ELQ66527.1| tRNA-dihydrouridine synthase 4 [Magnaporthe oryzae P131]
Length = 339
Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP LF+G R +E +++ + F HHL M + +
Sbjct: 236 MSARGLLANPSLFAGTQRCSWDVVEHFLNRAAQAPLPFKLVTHHLTEMTAPGMGPDKASL 295
Query: 58 LN 59
LN
Sbjct: 296 LN 297
>gi|389633033|ref|XP_003714169.1| tRNA-dihydrouridine synthase 4 [Magnaporthe oryzae 70-15]
gi|351646502|gb|EHA54362.1| tRNA-dihydrouridine synthase 4 [Magnaporthe oryzae 70-15]
Length = 380
Score = 36.6 bits (83), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTF---LHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP LF+G R +E +++ + F HHL M + +
Sbjct: 277 MSARGLLANPSLFAGTQRCSWDVVEHFLNRAAQAPLPFKLVTHHLTEMTAPGMGPDKASL 336
Query: 58 LN 59
LN
Sbjct: 337 LN 338
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.132 0.378
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,120,173,143
Number of Sequences: 23463169
Number of extensions: 122516381
Number of successful extensions: 376681
Number of sequences better than 100.0: 282
Number of HSP's better than 100.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 148
Number of HSP's that attempted gapping in prelim test: 376173
Number of HSP's gapped (non-prelim): 472
length of query: 208
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 72
effective length of database: 9,168,204,383
effective search space: 660110715576
effective search space used: 660110715576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)