Your job contains 1 sequence.
>psy17868
MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFLHHLVFMCDKLLSSQEKDQLNS
LYSGVEILDFIENKFHVQSPCRSHFVNLNKGSKYEEESEGKFFQEEMSSVKKQVAKDLME
DILDNCLSSQEKDQLNSLYSGVEILDFIENKFHVQSSCRSHFVNLNKGSKYEEESEGKFF
QEEMSSVKKQVAKDLTEDILDNCFNIYE
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17868
(208 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1NHN2 - symbol:DUS4L "tRNA-dihydrouridine synt... 174 5.7e-13 1
ZFIN|ZDB-GENE-040801-233 - symbol:dus4l "dihydrouridine s... 170 1.6e-12 1
MGI|MGI:1919166 - symbol:Dus4l "dihydrouridine synthase 4... 164 9.3e-12 1
UNIPROTKB|E2RRJ8 - symbol:DUS4L "Uncharacterized protein"... 163 1.1e-11 1
UNIPROTKB|D4A0T1 - symbol:Dus4l "Protein Dus4l" species:1... 159 3.3e-11 1
RGD|1311445 - symbol:Dus4l "dihydrouridine synthase 4-lik... 159 3.4e-11 1
UNIPROTKB|O95620 - symbol:DUS4L "tRNA-dihydrouridine(20a/... 157 5.3e-11 1
DICTYBASE|DDB_G0291360 - symbol:dus4l "tRNA-dihydrouridin... 141 3.8e-09 1
POMBASE|SPCC777.15 - symbol:SPCC777.15 "tRNA dihydrouridi... 137 9.4e-09 1
FB|FBgn0032750 - symbol:CG10495 species:7227 "Drosophila ... 137 1.4e-08 1
WB|WBGene00016674 - symbol:C45G9.2 species:6239 "Caenorha... 122 2.5e-06 1
>UNIPROTKB|F1NHN2 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine synthase" species:9031
"Gallus gallus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 OMA:AGPMVRY GeneTree:ENSGT00550000074907
EMBL:AC147596 IPI:IPI00813011 Ensembl:ENSGALT00000039460
Uniprot:F1NHN2
Length = 307
Score = 174 (66.3 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI++WV + H F F HHL++M +++ S QEK
Sbjct: 226 MVARGLLANPAMFAGYEETPLKCIQDWVDIALEHGTPFTCFHHHLMYMMERITSKQEKKV 285
Query: 58 LNSLYSGVEILDFIENKFHVQS 79
N L S +LD++ + + V S
Sbjct: 286 FNILSSTSAVLDYLGHHYGVCS 307
>ZFIN|ZDB-GENE-040801-233 [details] [associations]
symbol:dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase
activity" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016491 "oxidoreductase activity" evidence=IEA]
InterPro:IPR001269 InterPro:IPR013785 InterPro:IPR018517
Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
ZFIN:ZDB-GENE-040801-233 Gene3D:3.20.20.70 GO:GO:0050660
HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
CTD:11062 HOVERGEN:HBG053313 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:BX072538 IPI:IPI00487005
RefSeq:NP_001003490.2 UniGene:Dr.89736 Ensembl:ENSDART00000130623
GeneID:445096 KEGG:dre:445096 InParanoid:Q5RIX6 NextBio:20831860
Uniprot:Q5RIX6
Length = 307
Score = 170 (64.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNH---FMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL NP +FSG TP+ C+ +WV + H F F HHL+ M +++ S E+
Sbjct: 227 MSARGLLSNPAMFSGFEETPLQCVWDWVDIAAEHGTPFTCFHHHLIHMLERITSQPERRV 286
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S ++DF+ N +
Sbjct: 287 FNNLSSTSAVIDFLHNTY 304
>MGI|MGI:1919166 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0017150
"tRNA dihydrouridine synthase activity" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 MGI:MGI:1919166 Gene3D:3.20.20.70
GO:GO:0050660 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 HOVERGEN:HBG053313
KO:K05545 OrthoDB:EOG4ZCT4T EMBL:AK010138 EMBL:BC109351
IPI:IPI00109359 RefSeq:NP_082278.1 UniGene:Mm.62979
ProteinModelPortal:Q32M08 SMR:Q32M08 STRING:Q32M08 PRIDE:Q32M08
Ensembl:ENSMUST00000020977 GeneID:71916 KEGG:mmu:71916
UCSC:uc007nhr.1 GeneTree:ENSGT00550000074907 InParanoid:Q32M08
NextBio:334944 Bgee:Q32M08 CleanEx:MM_DUS4L Genevestigator:Q32M08
GermOnline:ENSMUSG00000020648 Uniprot:Q32M08
Length = 324
Score = 164 (62.8 bits), Expect = 9.3e-12, P = 9.3e-12
Identities = 34/86 (39%), Positives = 51/86 (59%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDISLELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHVQSPCRS 83
N+L S +LD++ + + +S +S
Sbjct: 298 FNALSSTSAVLDYLTDHYGDESLSKS 323
>UNIPROTKB|E2RRJ8 [details] [associations]
symbol:DUS4L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
Gene3D:3.20.20.70 GO:GO:0050660 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 CTD:11062 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AAEX03011212 RefSeq:XP_540383.2
Ensembl:ENSCAFT00000006298 GeneID:483264 KEGG:cfa:483264
Uniprot:E2RRJ8
Length = 317
Score = 163 (62.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G N TP+ CI +W+ + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYNETPLQCIWDWIDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S +LD++ + + +
Sbjct: 298 FNALSSTSAVLDYLTDHYGI 317
>UNIPROTKB|D4A0T1 [details] [associations]
symbol:Dus4l "Protein Dus4l" species:10116 "Rattus
norvegicus" [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=IEA] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
RGD:1311445 Gene3D:3.20.20.70 GO:GO:0050660 EMBL:CH473947
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 CTD:11062 KO:K05545
OrthoDB:EOG4ZCT4T GeneTree:ENSGT00550000074907 IPI:IPI00951041
RefSeq:NP_001129275.1 UniGene:Rn.41975 Ensembl:ENSRNOT00000068419
GeneID:366593 KEGG:rno:366593 NextBio:689691 Uniprot:D4A0T1
Length = 321
Score = 159 (61.0 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ C+ +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCVWDWVDIALELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 298 FNALSSTSAVLDYLTDHY 315
>RGD|1311445 [details] [associations]
symbol:Dus4l "dihydrouridine synthase 4-like (S. cerevisiae)"
species:10116 "Rattus norvegicus" [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] [GO:0050660 "flavin adenine
dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 RGD:1311445 Gene3D:3.20.20.70
GO:GO:0050660 GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082
IPI:IPI00914747 ProteinModelPortal:D4A3L7
Ensembl:ENSRNOT00000011068 UCSC:RGD:1311445 ArrayExpress:D4A3L7
Uniprot:D4A3L7
Length = 324
Score = 159 (61.0 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ C+ +WV + FM F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCVWDWVDIALELGTPFMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKF 75
N+L S +LD++ + +
Sbjct: 298 FNALSSTSAVLDYLTDHY 315
>UNIPROTKB|O95620 [details] [associations]
symbol:DUS4L "tRNA-dihydrouridine(20a/20b) synthase
[NAD(P)+]-like" species:9606 "Homo sapiens" [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
EMBL:CH471070 eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150
GO:GO:0002943 PANTHER:PTHR11082 EMBL:U62767 EMBL:AK297195
EMBL:BC111774 IPI:IPI00021410 IPI:IPI00783809 RefSeq:NP_001257348.1
RefSeq:NP_853559.1 UniGene:Hs.97627 ProteinModelPortal:O95620
SMR:O95620 STRING:O95620 PaxDb:O95620 PRIDE:O95620
Ensembl:ENST00000265720 Ensembl:ENST00000402620 GeneID:11062
KEGG:hsa:11062 UCSC:uc003veh.3 CTD:11062 GeneCards:GC07P107203
HGNC:HGNC:21517 HPA:HPA044301 neXtProt:NX_O95620
PharmGKB:PA142671939 HOVERGEN:HBG053313 InParanoid:O95620 KO:K05545
OMA:AGPMVRY OrthoDB:EOG4ZCT4T PhylomeDB:O95620 GenomeRNAi:11062
NextBio:42037 ArrayExpress:O95620 Bgee:O95620 CleanEx:HS_DUS4L
Genevestigator:O95620 GermOnline:ENSG00000105865 Uniprot:O95620
Length = 317
Score = 157 (60.3 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 31/80 (38%), Positives = 48/80 (60%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMK---HNHFMTFLHHLVFMCDKLLSSQEKDQ 57
M ARGLL NP +F+G TP+ CI +WV + +M F HL++M +K+ S QEK
Sbjct: 238 MVARGLLANPAMFAGYEETPLKCIWDWVDIALELGTPYMCFHQHLMYMMEKITSRQEKRV 297
Query: 58 LNSLYSGVEILDFIENKFHV 77
N+L S I+D++ + + +
Sbjct: 298 FNALSSTSAIIDYLTDHYGI 317
>DICTYBASE|DDB_G0291360 [details] [associations]
symbol:dus4l "tRNA-dihydrouridine synthase 4-like
protein" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA;ISS] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0002943 "tRNA dihydrouridine synthesis"
evidence=IEA;ISS] [GO:0006400 "tRNA modification" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0016491
"oxidoreductase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 dictyBase:DDB_G0291360
GO:GO:0005739 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042 GO:GO:0017150
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY RefSeq:XP_635163.1
ProteinModelPortal:Q54ES7 STRING:Q54ES7 EnsemblProtists:DDB0238074
GeneID:8628109 KEGG:ddi:DDB_G0291360 ProtClustDB:CLSZ2429554
Uniprot:Q54ES7
Length = 344
Score = 141 (54.7 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 29/79 (36%), Positives = 49/79 (62%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHN----HFMTFLHHLVFMCDKLLSSQEKD 56
M+ARGLL NP LF G ++TP+ CI++++++ H + F HL++M + + EK
Sbjct: 264 MSARGLLTNPALFQGYDKTPIECIKDFINIYSEYGGLHPVIFHRHLMYMLYEYHNKNEKS 323
Query: 57 QLNSLYSGVEILDFIENKF 75
+ N L + I+D+I +KF
Sbjct: 324 EFNKLSTISGIMDYINDKF 342
>POMBASE|SPCC777.15 [details] [associations]
symbol:SPCC777.15 "tRNA dihydrouridine synthase Dus4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISO] [GO:0017150 "tRNA dihydrouridine synthase activity"
evidence=ISO] [GO:0050660 "flavin adenine dinucleotide binding"
evidence=IEA] InterPro:IPR001269 InterPro:IPR013785
InterPro:IPR018517 Pfam:PF01207 PIRSF:PIRSF006621 PROSITE:PS01136
PomBase:SPCC777.15 GO:GO:0005739 EMBL:CU329672
GenomeReviews:CU329672_GR Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 PANTHER:PTHR11082
KO:K05545 OMA:AGPMVRY PIR:T11721 RefSeq:NP_588262.1
ProteinModelPortal:O74553 STRING:O74553 EnsemblFungi:SPCC777.15.1
GeneID:2538996 KEGG:spo:SPCC777.15 OrthoDB:EOG4PZNGJ
NextBio:20800171 Uniprot:O74553
Length = 326
Score = 137 (53.3 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 29/83 (34%), Positives = 48/83 (57%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEE--WVSMKHN-HFMTFLHHLVFMCDKLLSSQEKDQ 57
M+ARGLL+NP LF+G TP C+E W S ++ +F F HHL M ++ + +E+
Sbjct: 230 MSARGLLENPALFAGYEETPWGCVERFLWYSTSYSLNFHLFYHHLTTMMGQMTTKRERMT 289
Query: 58 LNSLYSGVEILDFIENKFHVQSP 80
+ S ++D+++ F V+ P
Sbjct: 290 IPK-DSFASVMDWLDEHFVVRRP 311
>FB|FBgn0032750 [details] [associations]
symbol:CG10495 species:7227 "Drosophila melanogaster"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0050660
"flavin adenine dinucleotide binding" evidence=IEA] [GO:0008033
"tRNA processing" evidence=IEA] [GO:0017150 "tRNA dihydrouridine
synthase activity" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207 PROSITE:PS01136
EMBL:AE014134 Gene3D:3.20.20.70 GO:GO:0050660 eggNOG:COG0042
GO:GO:0017150 GO:GO:0002943 PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:AY069347 RefSeq:NP_609939.1
UniGene:Dm.465 SMR:Q9VJ06 STRING:Q9VJ06 EnsemblMetazoa:FBtr0081150
GeneID:35179 KEGG:dme:Dmel_CG10495 UCSC:CG10495-RA
FlyBase:FBgn0032750 InParanoid:Q9VJ06 OrthoDB:EOG4X3FH5
GenomeRNAi:35179 NextBio:792243 Uniprot:Q9VJ06
Length = 396
Score = 137 (53.3 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 30/87 (34%), Positives = 48/87 (55%)
Query: 1 MAARGLLKNPGLFSG----ANRTPMSCIEEWVSMKHNH-----FMTFLHHLVFMCDKLLS 51
MAARGLL NP LF+ TP+SC+++W+ + F F HHL FM +
Sbjct: 238 MAARGLLANPALFNSNYPDGKTTPLSCVQQWLDIASAAGDNLLFQCFHHHLTFMYSAQMK 297
Query: 52 SQEKDQLNSLYSGVEILDFIENKFHVQ 78
+ Q NSL S +++DF++ ++++
Sbjct: 298 RDLRVQFNSLGSKEQVVDFLKEHYNLE 324
>WB|WBGene00016674 [details] [associations]
symbol:C45G9.2 species:6239 "Caenorhabditis elegans"
[GO:0008033 "tRNA processing" evidence=IEA] [GO:0017150 "tRNA
dihydrouridine synthase activity" evidence=IEA] [GO:0050660 "flavin
adenine dinucleotide binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001269
InterPro:IPR013785 InterPro:IPR018517 Pfam:PF01207
PIRSF:PIRSF006621 PROSITE:PS01136 Gene3D:3.20.20.70 GO:GO:0050660
eggNOG:COG0042 HOGENOM:HOG000203649 GO:GO:0017150 GO:GO:0002943
PANTHER:PTHR11082 KO:K05545 OMA:AGPMVRY
GeneTree:ENSGT00550000074907 EMBL:FO080873 PIR:A88449
RefSeq:NP_498078.2 ProteinModelPortal:Q09504 SMR:Q09504
STRING:Q09504 EnsemblMetazoa:C45G9.2 GeneID:183479
KEGG:cel:CELE_C45G9.2 UCSC:C45G9.2 CTD:183479 WormBase:C45G9.2
InParanoid:Q09504 NextBio:921288 Uniprot:Q09504
Length = 284
Score = 122 (48.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 1 MAARGLLKNPGLFSGANRTPMSCIEEWVSMKHNHFMTFL--H-HLVFMCDKLLSSQEKDQ 57
MAA GLL NP LF+G TP C+E ++ + + + +L H HL +M + S+Q++
Sbjct: 205 MAANGLLDNPALFAGHEHTPSDCVENFMRLSREYGLDWLLYHQHLQYMLRPVFSAQQRRV 264
Query: 58 LNSLYSGVEILDFIEN 73
N L + I F+ N
Sbjct: 265 FNELNGRLAIDHFLNN 280
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 208 174 0.00075 109 3 11 22 0.38 32
31 0.49 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 588 (63 KB)
Total size of DFA: 153 KB (2091 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.12u 0.08s 15.20t Elapsed: 00:00:02
Total cpu time: 15.12u 0.09s 15.21t Elapsed: 00:00:02
Start: Thu Aug 15 16:29:53 2013 End: Thu Aug 15 16:29:55 2013