RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy17870
(406 letters)
>gnl|CDD|223071 PHA03392, egt, ecdysteroid UDP-glucosyltransferase; Provisional.
Length = 507
Score = 157 bits (400), Expect = 3e-43
Identities = 62/216 (28%), Positives = 119/216 (55%), Gaps = 3/216 (1%)
Query: 164 TVDLAKWVEGGKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWENE-ELE 222
L +++ G +Y S GS++ + +++ +L + P Y ++WK++ E E
Sbjct: 284 DDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-YNVLWKYDGEVEAI 342
Query: 223 GLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKI 282
LP+NV+ +KW PQ +L H N+K F+TQGG+QS EA+ VP++G+P GDQ YN
Sbjct: 343 NLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNK 402
Query: 283 IRRLGIGSYMEFEDIHTETLFENIQEILNNYDRYKKAVKRASDISKTQMMSPRDTAVWWV 342
LGIG ++ + L I +++ N +Y+K +K + + Q M+P A+W+
Sbjct: 403 YVELGIGRALDTVTVSAAQLVLAIVDVIEN-PKYRKNLKELRHLIRHQPMTPLHKAIWYT 461
Query: 343 EYLLKADGNVSHLQPEYWHLTWYEYFGLDVYLVIFS 378
E++++ + L+ + ++++ +YF + + + +
Sbjct: 462 EHVIRNKHGNTSLKTKAANVSYSDYFMSYILVPLVT 497
Score = 90.0 bits (224), Expect = 2e-19
Identities = 44/139 (31%), Positives = 77/139 (55%), Gaps = 6/139 (4%)
Query: 28 QDALAKKYFGSSCPSTKDMVRNR-SLLLSSSMWIFEYTRPVFPNTIHVGPLHIGDTKPLP 86
Q+ L K+ FG P+ +++ RNR LL + +F+ RPV P+ ++G LH+ P P
Sbjct: 224 QNKLLKQQFGPDTPTIREL-RNRVQLLFVNVHPVFDNNRPVPPSVQYLGGLHLHKKPPQP 282
Query: 87 QD--LAKWVEGGKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWENE-EL 143
D L +++ G +Y S GS++ + +++ +L + P Y ++WK++ E E
Sbjct: 283 LDDYLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-YNVLWKYDGEVEA 341
Query: 144 EGLPSNVICRKWLPQHDLL 162
LP+NV+ +KW PQ +L
Sbjct: 342 INLPANVLTQKWFPQRAVL 360
>gnl|CDD|201077 pfam00201, UDPGT, UDP-glucoronosyl and UDP-glucosyl transferase.
Length = 500
Score = 143 bits (362), Expect = 4e-38
Identities = 77/232 (33%), Positives = 121/232 (52%), Gaps = 14/232 (6%)
Query: 174 GKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNVICRKW 233
G+ G + FSLGS V + + K I +ALA+ P +++W+++ + L N KW
Sbjct: 274 GEHGVVVFSLGSMVS--NIPEEKANEIASALAQIPQ-KVLWRFDGTKPSTLGRNTRLVKW 330
Query: 234 LPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIRRLGIGSYME 293
LPQ+DLL HP + F+T G + EA+ VP++G+P FGDQ N K + G +
Sbjct: 331 LPQNDLLGHPKTRAFVTHAGSNGVYEAICHGVPMVGMPLFGDQMDNAKHMEAKGAAVTLN 390
Query: 294 FEDIHTETLFENIQEILNNYDRYKKAVKRASDISKTQMMSPRDTAVWWVEYLLKADGNVS 353
+ +E L ++ ++N+ YK+ + R S I Q + P D AV+W+E++++ G
Sbjct: 391 VLTMTSEDLLNALKTVIND-PSYKENIMRLSSIHHDQPVKPLDRAVFWIEFVMRHKG-AK 448
Query: 354 HLQPEYWHLTWYEYFGLDVY--------LVIFSPVILALYGLYRLVLTINRR 397
HL+P LTWY+Y LDV V F L+G YR + +R
Sbjct: 449 HLRPAAHDLTWYQYHSLDVIGFLLACVATVAFITFKCCLFG-YRKFVGKKKR 499
Score = 87.5 bits (217), Expect = 9e-19
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 1 MSFYYRLEGYLYLLYARLVLAPRIFSAQDALAKKYFGSSCPST-KDMVRNRSLLLSSSMW 59
M+F R++ L +LY R D A + G P T +++ S L + W
Sbjct: 180 MTFGERVKNMLIMLYFDF-WFQRFPKKWDQFASELLGR--PVTLPELMSKASAWLLRNYW 236
Query: 60 IFEYTRPVFPNTIHVGPLHIGDTKPLPQDLAKWVE-GGKKGAIYFSLGSNVKSAALEDSK 118
E+ RP+ PN +G L+ KPLPQ++ +V+ G+ G + FSLGS V + + K
Sbjct: 237 DLEFPRPLLPNMEFIGGLNCKPAKPLPQEMEAFVQSSGEHGVVVFSLGSMVS--NIPEEK 294
Query: 119 RTAILAALARFPDYRIIWKWENEELEGLPSNVICRKWLPQHDLLG 163
I +ALA+ P +++W+++ + L N KWLPQ+DLLG
Sbjct: 295 ANEIASALAQIPQ-KVLWRFDGTKPSTLGRNTRLVKWLPQNDLLG 338
>gnl|CDD|224732 COG1819, COG1819, Glycosyl transferases, related to
UDP-glucuronosyltransferase [Carbohydrate transport and
metabolism / Signal transduction mechanisms].
Length = 406
Score = 94.0 bits (234), Expect = 5e-21
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 10/174 (5%)
Query: 166 DLAKWVEGGKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKW-ENEELEGL 224
+L W+ + +Y SLG+ + L +L ALA I+ + L +
Sbjct: 228 ELPYWIPADRP-IVYVSLGTVGNAVELL----AIVLEALADLDVRVIVSLGGARDTLVNV 282
Query: 225 PSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIR 284
P NVI ++PQ +LL + I GG + EA++ VP++ IP DQ N + +
Sbjct: 283 PDNVIVADYVPQLELLPRAD--AVIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVE 340
Query: 285 RLGIGSYMEFEDIHTETLFENIQEILNNYDRYKKAVKRASDISKTQMMSPRDTA 338
LG G + FE++ E L + E+L + D Y++A +R ++ K + P A
Sbjct: 341 ELGAGIALPFEELTEERLRAAVNEVLAD-DSYRRAAERLAEEFKEE-DGPAKAA 392
Score = 39.0 bits (91), Expect = 0.004
Identities = 32/164 (19%), Positives = 53/164 (32%), Gaps = 9/164 (5%)
Query: 6 RLEGYLYLLYARLVLAPRIFSAQDALAKKYFGSSCPSTKDMVRNRSLLLSSSMWIFEYTR 65
L L L+ A P+ + + + LL + +
Sbjct: 149 PLYPLPPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPG 208
Query: 66 PVFPNTIHVGPLHIGDTKPLPQDLAKWVEGGKKGAIYFSLGSNVKSAALEDSKRTAILAA 125
P +GP +L W+ + +Y SLG+ + L +L A
Sbjct: 209 DRLPF---IGPYIGPLLGEAANELPYWIPADRP-IVYVSLGTVGNAVELL----AIVLEA 260
Query: 126 LARFPDYRIIWKW-ENEELEGLPSNVICRKWLPQHDLLGTVDLA 168
LA I+ + L +P NVI ++PQ +LL D
Sbjct: 261 LADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQLELLPRADAV 304
>gnl|CDD|99960 cd03784, GT1_Gtf_like, This family includes the Gtfs, a group of
homologous glycosyltransferases involved in the final
stages of the biosynthesis of antibiotics vancomycin and
related chloroeremomycin. Gtfs transfer sugar moieties
from an activated NDP-sugar donor to the oxidatively
cross-linked heptapeptide core of vancomycin group
antibiotics. The core structure is important for the
bioactivity of the antibiotics.
Length = 401
Score = 80.5 bits (199), Expect = 2e-16
Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Query: 164 TVDLAKWVEGGKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWK--WENEEL 221
+L ++ G+ +Y GS V ++ + A+A R I W
Sbjct: 228 PPELWLFLAAGRP-PVYVGFGSMV--VRDPEALARLDVEAVATLGQ-RAILSLGWGGLGA 283
Query: 222 EGLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVK 281
E LP NV ++P LL P + GG + A+ VP + +PFFGDQ +
Sbjct: 284 EDLPDNVRVVDFVPHDWLL--PRCAAVVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAA 341
Query: 282 IIRRLGIGSYMEFEDIHTETLFENIQEILNNYDRYKKAVKRASDI 326
+ LG G ++ ++ E L ++ +L+ ++A I
Sbjct: 342 RVAELGAGPALDPRELTAERLAAALRRLLDP-PSRRRAAALLRRI 385
Score = 42.0 bits (99), Expect = 4e-04
Identities = 36/171 (21%), Positives = 51/171 (29%), Gaps = 9/171 (5%)
Query: 3 FYYRLEGYLYLLYARLVLAPRIFSAQDALA--KKYFGSSCPSTKDMVRNRSLLLSSSMWI 60
F L LYA L L ++ G S D L S +
Sbjct: 142 FPPPLGRANLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVL 201
Query: 61 -FEYTRPVFPNTIHVGPLHIGDTKPLPQDLAKWVEGGKKGAIYFSLGSNVKSAALEDSKR 119
P F G + P P +L ++ G+ +Y GS V ++
Sbjct: 202 PPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLAAGRP-PVYVGFGSMV--VRDPEALA 258
Query: 120 TAILAALARFPDYRIIWK--WENEELEGLPSNVICRKWLPQHDLLGTVDLA 168
+ A+A R I W E LP NV ++P LL
Sbjct: 259 RLDVEAVATLGQ-RAILSLGWGGLGAEDLPDNVRVVDFVPHDWLLPRCAAV 308
>gnl|CDD|233407 TIGR01426, MGT, glycosyltransferase, MGT family. This model
describes the MGT (macroside glycosyltransferase)
subfamily of the UDP-glucuronosyltransferase family.
Members include a number of glucosyl transferases for
macrolide antibiotic inactivation, but also include
transferases of glucose-related sugars for macrolide
antibiotic production [Cellular processes, Toxin
production and resistance].
Length = 392
Score = 78.6 bits (194), Expect = 5e-16
Identities = 34/104 (32%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Query: 219 EELEGLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNY 278
+L LP NV R+W+PQ ++L + FIT GG+ S EA+ VP++ +P DQ
Sbjct: 268 ADLGELPPNVEVRQWVPQLEILKKAD--AFITHGGMNSTMEALFNGVPMVAVPQGADQPM 325
Query: 279 NVKIIRRLGIGSYMEFEDIHTETLFENIQEILNNYDRYKKAVKR 322
+ I LG+G ++ E++ E L E + +L++ RY + +++
Sbjct: 326 TARRIAELGLGRHLPPEEVTAEKLREAVLAVLSD-PRYAERLRK 368
Score = 34.3 bits (79), Expect = 0.11
Identities = 36/160 (22%), Positives = 60/160 (37%), Gaps = 31/160 (19%)
Query: 23 RIFSAQDALAKKYFGSSCPSTKDMVRNRSLL----LSSSMWIFEYTRPVFPNTIH-VGPL 77
+ AL +++ G + P + + R L + F+ F ++ VGP
Sbjct: 153 EYVARLSALLEEH-GITTPPVEFLAAPRRDLNLVYTPKA---FQPAGETFDDSFTFVGPC 208
Query: 78 HIGDTKPLPQDLAKWVEGGKKGAIYFSLGS---------NVKSAALEDSKRTAILAALAR 128
IGD K +D + G + + SLG+ A D +L+ + R
Sbjct: 209 -IGDRK---EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLS-VGR 263
Query: 129 FPDYRIIWKWENEELEGLPSNVICRKWLPQHDLLGTVDLA 168
D +L LP NV R+W+PQ ++L D
Sbjct: 264 GVD--------PADLGELPPNVEVRQWVPQLEILKKADAF 295
>gnl|CDD|177857 PLN02207, PLN02207, UDP-glycosyltransferase.
Length = 468
Score = 50.4 bits (120), Expect = 8e-07
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 40/199 (20%)
Query: 157 PQHDLLGTVDLAKWVEGGKKGAIYF----SLGSNVKSAALEDSKRTAILAALARFPDYRI 212
P+ DL +L KW++ + ++ F S+G E +A YR
Sbjct: 255 PEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKE-------IAHGLELCQYRF 307
Query: 213 IWKWENEEL-------EGLPSNV-----ICRKWLPQHDLLAHPNIKLFITQGGLQSLQEA 260
+W EE+ EG V IC W PQ ++LAH + F++ G S+ E+
Sbjct: 308 LWSLRTEEVTNDDLLPEGFLDRVSGRGMIC-GWSPQVEILAHKAVGGFVSHCGWNSIVES 366
Query: 261 VHFEVPVIGIPFFGDQNYNV-KIIRRLGIGSYMEFE-DIHT---------ETLFENIQEI 309
+ F VP++ P + +Q N +++ L + ++ + +H+ ET +
Sbjct: 367 LWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK 426
Query: 310 LNNYDRYKKAVKRASDISK 328
NN R KR DIS+
Sbjct: 427 DNNVVR-----KRVMDISQ 440
>gnl|CDD|177830 PLN02173, PLN02173, UDP-glucosyl transferase family protein.
Length = 449
Score = 49.3 bits (117), Expect = 2e-06
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 170 WVEGGKKGAI-YFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNV 228
W++ +G++ Y + GS A L + I +A++ F +W E LP
Sbjct: 257 WLDKRPQGSVVYIAFGS---MAKLSSEQMEEIASAISNF---SYLWVVRASEESKLPPGF 310
Query: 229 I---------CRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYN 279
+ KW PQ +L++ I F+T G S E + VP++ +P + DQ N
Sbjct: 311 LETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQWTDQPMN 370
Query: 280 VKIIR 284
K I+
Sbjct: 371 AKYIQ 375
>gnl|CDD|215084 PLN00164, PLN00164, glucosyltransferase; Provisional.
Length = 480
Score = 48.9 bits (117), Expect = 3e-06
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 231 RKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNV-KIIRRLGIG 289
W PQ ++LAH + F+T G S+ E++ VP+ P + +Q+ N +++ +G+
Sbjct: 344 PTWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVA 403
Query: 290 SYME 293
M+
Sbjct: 404 VAMK 407
>gnl|CDD|178170 PLN02555, PLN02555, limonoid glucosyltransferase.
Length = 480
Score = 47.5 bits (113), Expect = 8e-06
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 217 ENEELEGLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQ 276
E E G ++ +W PQ +LAHP++ F+T G S EA+ VPV+ P +GDQ
Sbjct: 330 EFLEKAGDKGKIV--QWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFPQWGDQ 387
Query: 277 NYNVK 281
+
Sbjct: 388 VTDAV 392
>gnl|CDD|215112 PLN02167, PLN02167, UDP-glycosyltransferase family protein.
Length = 475
Score = 46.7 bits (111), Expect = 1e-05
Identities = 29/123 (23%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 222 EGLPSNVICR----KWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQN 277
EG V+ R W PQ ++LAH I F++ G S+ E++ F VP+ P + +Q
Sbjct: 332 EGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWPMYAEQQ 391
Query: 278 YNV-KIIRRLGIGSYMEF-------EDIHTETLFENIQEILNNYDRYKKAVKRASDISKT 329
N +++ LG+ + E + + + ++ +++ D +K VK ++ ++
Sbjct: 392 LNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGEDVPRKKVKEIAEAARK 451
Query: 330 QMM 332
+M
Sbjct: 452 AVM 454
>gnl|CDD|215293 PLN02534, PLN02534, UDP-glycosyltransferase.
Length = 491
Score = 46.4 bits (110), Expect = 2e-05
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 13/134 (9%)
Query: 169 KWVEGGKKGA-IYFSLGSNVK---------SAALEDSKRTAILAALA--RFPDYRIIWKW 216
+W++ K + IY LGS + LE SK+ I + +
Sbjct: 275 EWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVK 334
Query: 217 ENEELEGLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQ 276
EN E ++ + W PQ +L+HP I F+T G S E + VP+I P F +Q
Sbjct: 335 ENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWPLFAEQ 394
Query: 277 NYNVK-IIRRLGIG 289
N K I+ L IG
Sbjct: 395 FLNEKLIVEVLRIG 408
>gnl|CDD|222200 pfam13528, Glyco_trans_1_3, Glycosyl transferase family 1.
Length = 317
Score = 46.1 bits (110), Expect = 2e-05
Identities = 31/105 (29%), Positives = 45/105 (42%), Gaps = 9/105 (8%)
Query: 198 TAILAALARFPDYRIIWKWENEELEGLPSNVICRKWLP---QHDLLAHPNIKLFITQGGL 254
+ L FPDY I N+E EG N+ R + DL I G
Sbjct: 204 EDVAELLKPFPDYEFIVYGPNKE-EGREGNLTFRPFSEEGFLRDLAEC---SAVICNAGF 259
Query: 255 QSLQEAVHFEVPVIGIPFFG--DQNYNVKIIRRLGIGSYMEFEDI 297
+ L EA++ P++ +P G +Q N + RLG G M+ ED+
Sbjct: 260 ELLSEALYLGKPLLLVPLDGQFEQTSNALYLERLGYGIVMDMEDL 304
>gnl|CDD|178581 PLN03004, PLN03004, UDP-glycosyltransferase.
Length = 451
Score = 45.5 bits (107), Expect = 4e-05
Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 228 VICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYN-VKIIRRL 286
++ + W PQ +L H + F+T G S+ EAV VP++ P + +Q +N V I+ +
Sbjct: 336 MVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEI 395
Query: 287 GIGSYMEFED---IHTETLFENIQEILNNYDRYKK--AVKRASDISKTQMMSPRD 336
I M + + + + + +QEI+ ++ A+K A++++ T+ S
Sbjct: 396 KIAISMNESETGFVSSTEVEKRVQEIIGECPVRERTMAMKNAAELALTETGSSHT 450
>gnl|CDD|178572 PLN02992, PLN02992, coniferyl-alcohol glucosyltransferase.
Length = 481
Score = 45.4 bits (107), Expect = 4e-05
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 233 WLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIR-RLGI 288
W PQ ++LAH + F+T G S E+V VP+I P F +QN N ++ LGI
Sbjct: 345 WAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGI 401
>gnl|CDD|215127 PLN02210, PLN02210, UDP-glucosyl transferase.
Length = 456
Score = 43.5 bits (102), Expect = 1e-04
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 169 KWVEG-GKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIW----KWENEELEG 223
+W++ + +Y S GS ++S LE+ T +A + +W K + + ++
Sbjct: 261 EWLDKQARSSVVYISFGSMLES--LENQVET--IAKALKNRGVPFLWVIRPKEKAQNVQV 316
Query: 224 LPSNV-----ICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNY 278
L V + +W PQ +L+H I F+T G S E V VPV+ P + DQ
Sbjct: 317 LQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPI 376
Query: 279 NVK-IIRRLGIGSYMEFEDIHTETLFENIQ 307
+ + ++ GIG M + + E E ++
Sbjct: 377 DARLLVDVFGIGVRMRNDAVDGELKVEEVE 406
>gnl|CDD|178032 PLN02410, PLN02410, UDP-glucoronosyl/UDP-glucosyl transferase
family protein.
Length = 451
Score = 43.1 bits (101), Expect = 2e-04
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 232 KWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIR---RLGI 288
KW PQ ++L+HP + F + G S E++ VP+I PF DQ N + + ++GI
Sbjct: 330 KWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGI 389
>gnl|CDD|215304 PLN02554, PLN02554, UDP-glycosyltransferase family protein.
Length = 481
Score = 43.2 bits (102), Expect = 2e-04
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 233 WLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYN 279
W PQ +LA P I F+T G S+ E++ F VP+ P + +Q +N
Sbjct: 349 WAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWPLYAEQKFN 395
>gnl|CDD|178584 PLN03007, PLN03007, UDP-glucosyltransferase family protein.
Length = 482
Score = 42.9 bits (101), Expect = 2e-04
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 169 KWVEGGKKGA-IYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIW-------KWENEE 220
KW++ K + IY S GS A+ ++ + I A L IW + E EE
Sbjct: 277 KWLDSKKPDSVIYLSFGS---VASFKNEQLFEIAAGL-EGSGQNFIWVVRKNENQGEKEE 332
Query: 221 L--EGLPSNV-----ICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFF 273
EG I R W PQ +L H F+T G SL E V +P++ P
Sbjct: 333 WLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWPVG 392
Query: 274 GDQNYNVKII 283
+Q YN K++
Sbjct: 393 AEQFYNEKLV 402
>gnl|CDD|233077 TIGR00661, MJ1255, conserved hypothetical protein. This model
represents nearly the full length of MJ1255 from
Methanococcus jannaschii and of an unpublished protein
from Vibrio cholerae, as well as the C-terminal half of
a protein from Methanobacterium thermoautotrophicum. A
small region (~50 amino acids) within the domain appears
related to a family of sugar transferases [Hypothetical
proteins, Conserved].
Length = 321
Score = 42.2 bits (99), Expect = 3e-04
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 236 QHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFG--DQNYNVKIIRRLGIGSYME 293
+ + N +L IT GG + EA+ P+I IP G +Q N + LG G +E
Sbjct: 242 KELI---KNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALE 298
Query: 294 FEDIHTETLFENIQEI 309
++++ +I+ +
Sbjct: 299 YKELRLLEAILDIRNM 314
>gnl|CDD|215247 PLN02448, PLN02448, UDP-glycosyltransferase family protein.
Length = 459
Score = 41.9 bits (99), Expect = 5e-04
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 12/127 (9%)
Query: 163 GTVDLAKWVEGGKKGAI-YFSLGS--NVKSAALEDSKRTAILAALARFPDYRIIWKWENE 219
D +W++ +G++ Y SLGS +V SA +++ I A L R R +W E
Sbjct: 260 NEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDE-----IAAGL-RDSGVRFLWVARGE 313
Query: 220 EL---EGLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQ 276
E + W Q +L H ++ F T G S EAV VP++ P F DQ
Sbjct: 314 ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQ 373
Query: 277 NYNVKII 283
N K+I
Sbjct: 374 PLNSKLI 380
>gnl|CDD|215305 PLN02562, PLN02562, UDP-glycosyltransferase.
Length = 448
Score = 40.6 bits (95), Expect = 0.001
Identities = 47/165 (28%), Positives = 67/165 (40%), Gaps = 14/165 (8%)
Query: 170 WVEGGKKGA-IYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNV 228
W++ K + IY S GS V S E + RT LA A + IW EGLP
Sbjct: 266 WLQEQKPNSVIYISFGSWV-SPIGESNVRTLALALEASGRPF--IWVLNPVWREGLPPGY 322
Query: 229 ICR--------KWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNV 280
+ R W PQ ++L H + ++T G S EA+ + ++ P GDQ N
Sbjct: 323 VERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQFVNC 382
Query: 281 K-IIRRLGIGSYME-FEDIHTETLFENIQEILNNYDRYKKAVKRA 323
I+ IG + F E + E +R K +RA
Sbjct: 383 AYIVDVWKIGVRISGFGQKEVEEGLRKVMEDSGMGERLMKLRERA 427
Score = 29.5 bits (66), Expect = 4.0
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 20/117 (17%)
Query: 63 YTRPVFPNTIHVGPLH------IGDTKPLPQDLA--KWVEGGKKGA-IYFSLGSNVKSAA 113
Y P + +GPLH I +D++ W++ K + IY S GS V S
Sbjct: 229 YNNGQNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWV-SPI 287
Query: 114 LEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNVICR--------KWLPQHDLL 162
E + RT LA A + IW EGLP + R W PQ ++L
Sbjct: 288 GESNVRTLALALEASGRPF--IWVLNPVWREGLPPGYVERVSKQGKVVSWAPQLEVL 342
>gnl|CDD|178364 PLN02764, PLN02764, glycosyltransferase family protein.
Length = 453
Score = 40.4 bits (94), Expect = 0.001
Identities = 24/111 (21%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 228 VICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIR-RL 286
V+ W+ Q +L+HP++ F++ G S+ E++ + ++ +P GDQ N +++ L
Sbjct: 319 VVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDEL 378
Query: 287 GIGSYMEFED---IHTETLFENIQEILNNYDRYKKAVKRASDISKTQMMSP 334
+ + E+ E+L + I ++ VK+ + + SP
Sbjct: 379 KVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASP 429
>gnl|CDD|177813 PLN02152, PLN02152, indole-3-acetate beta-glucosyltransferase.
Length = 455
Score = 39.7 bits (92), Expect = 0.002
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 233 WLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIRRL 286
W Q ++L H + F+T G S E++ VPV+ P + DQ N K++ +
Sbjct: 334 WCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEI 387
>gnl|CDD|223779 COG0707, MurG, UDP-N-acetylglucosamine:LPS N-acetylglucosamine
transferase [Cell envelope biogenesis, outer membrane].
Length = 357
Score = 38.8 bits (91), Expect = 0.004
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 247 LFITQGGLQSLQEAVHFEVPVIGIPF----FGDQNYNVKIIRRLGIGSYMEFEDIHTETL 302
L I++ G ++ E + VP I +P+ G Q YN K + + G + ++ E L
Sbjct: 255 LVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKL 314
Query: 303 FENIQEILNNYDRYKKAVKRASDISK 328
E I +L+N ++ K + A + K
Sbjct: 315 AELILRLLSNPEKLKAMAENAKKLGK 340
>gnl|CDD|178275 PLN02670, PLN02670, transferase, transferring glycosyl groups.
Length = 472
Score = 37.6 bits (87), Expect = 0.009
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 160 DLLGTVDLAKWVEGGK-KGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWEN 218
D+ G V + +W++ + +Y +LG+ S E+ A+ + P W N
Sbjct: 261 DVKGWVRIKEWLDKQRVNSVVYVALGTEA-SLRREEVTELALGLEKSETP---FFWVLRN 316
Query: 219 E------ELEGLPSN---------VICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHF 263
E LE LP +I W+PQ +L+H ++ F+T G S+ E + F
Sbjct: 317 EPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGF 376
Query: 264 EVPVIGIPFFGDQNYNVKIIRRLGIG 289
+I P +Q N +++ +G
Sbjct: 377 GRVLILFPVLNEQGLNTRLLHGKKLG 402
>gnl|CDD|178589 PLN03015, PLN03015, UDP-glucosyl transferase.
Length = 470
Score = 37.4 bits (86), Expect = 0.012
Identities = 15/56 (26%), Positives = 33/56 (58%)
Query: 228 VICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKII 283
++ +W PQ ++L+H +I F++ G S+ E++ VP++ P + +Q N ++
Sbjct: 337 LVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWPLYAEQWMNATLL 392
>gnl|CDD|215465 PLN02863, PLN02863, UDP-glucoronosyl/UDP-glucosyl transferase
family protein.
Length = 477
Score = 37.2 bits (86), Expect = 0.013
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 228 VICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKII 283
++ R W PQ +L+H + F+T G S+ E + VP++ P DQ N ++
Sbjct: 345 LVIRGWAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWPMAADQFVNASLL 400
>gnl|CDD|171505 PRK12446, PRK12446, undecaprenyldiphospho-muramoylpentapeptide
beta-N-acetylglucosaminyltransferase; Reviewed.
Length = 352
Score = 36.8 bits (85), Expect = 0.017
Identities = 22/79 (27%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 249 ITQGGLQSLQEAVHFEVPVIGIPFF-----GDQNYNVKIIRRLGIGSYMEFEDIHTETLF 303
I++ G ++ E + + P++ IP GDQ N + R G S + ED+ +L
Sbjct: 257 ISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLI 316
Query: 304 ENIQEILNNYDRYKKAVKR 322
++++E+ +N ++YK A+K+
Sbjct: 317 KHVEELSHNNEKYKTALKK 335
>gnl|CDD|233284 TIGR01133, murG, undecaprenyldiphospho-muramoylpentapeptide
beta-N-acetylglucosaminyltransferase. RM 8449890 RT The
final step of peptidoglycan subunit assembly in
Escherichia coli occurs in the cytoplasm. RA Bupp K, van
Heijenoort J. RL J Bacteriol 1993 Mar;175(6):1841-3
[Cell envelope, Biosynthesis and degradation of murein
sacculus and peptidoglycan].
Length = 348
Score = 36.5 bits (85), Expect = 0.019
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 247 LFITQGGLQSLQEAVHFEVPVIGIPF---FGDQNYNVKIIRRLGIGSYMEFEDIHTETLF 303
L I++ G ++ E VP I IP+ DQ YN K + LG G + +++ E L
Sbjct: 253 LVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLL 312
Query: 304 ENIQEILNNYDRYKKAVKRASDISK 328
E + ++L + + + A ++K
Sbjct: 313 EALLKLLLDPANLEAMAEAARKLAK 337
>gnl|CDD|217893 pfam04101, Glyco_tran_28_C, Glycosyltransferase family 28
C-terminal domain. The glycosyltransferase family 28
includes monogalactosyldiacylglycerol synthase (EC
2.4.1.46) and UDP-N-acetylglucosamine transferase (EC
2.4.1.-). Structural analysis suggests the C-terminal
domain contains the UDP-GlcNAc binding site.
Length = 167
Score = 35.4 bits (82), Expect = 0.022
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 9/92 (9%)
Query: 247 LFITQGGLQSLQEAVHFEVPVIGIP----FFGDQNYNVKIIRRLGIGSYMEFEDIHTETL 302
L I++ G ++ E + P I +P Q+ N + + G + +++ E L
Sbjct: 75 LVISRAGAGTIAELLALGKPAILVPRPKAAGEHQDNNALELVKAGAALVLLQKELTPEKL 134
Query: 303 FENIQEILNNYDRY-----KKAVKRASDISKT 329
E + ++L R R D K
Sbjct: 135 VEALLKLLLKPLRLYEMNKAAKGSRLKDAIKR 166
>gnl|CDD|177858 PLN02208, PLN02208, glycosyltransferase family protein.
Length = 442
Score = 36.1 bits (83), Expect = 0.031
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 222 EGLPSN---------VICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPF 272
EGLP V+ W+ Q +L HP+I F+ G ++ E++ + ++ IPF
Sbjct: 298 EGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIPF 357
Query: 273 FGDQ 276
DQ
Sbjct: 358 LSDQ 361
>gnl|CDD|177807 PLN00414, PLN00414, glycosyltransferase family protein.
Length = 446
Score = 35.8 bits (82), Expect = 0.037
Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 233 WLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKII-RRLGIGSY 291
W+ Q +L+HP++ F+ G S+ E++ + ++ IP DQ +++ L +
Sbjct: 319 WVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVK 378
Query: 292 MEFED---IHTETLFENIQEILNNYDRYKKAVKRASDISKTQMMSP 334
++ ED E+L + ++ +++ VKR K ++SP
Sbjct: 379 VQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLVSP 424
>gnl|CDD|99961 cd03785, GT1_MurG, MurG is an N-acetylglucosaminyltransferase, the
last enzyme involved in the intracellular phase of
peptidoglycan biosynthesis. It transfers
N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the
C4 hydroxyl of a lipid-linked N-acetylmuramoyl
pentapeptide (NAM). The resulting disaccharide is then
transported across the cell membrane, where it is
polymerized into NAG-NAM cell-wall repeat structure.
MurG belongs to the GT-B structural superfamily of
glycoslytransferases, which have characteristic N- and
C-terminal domains, each containing a typical Rossmann
fold. The two domains have high structural homology
despite minimal sequence homology. The large cleft that
separates the two domains includes the catalytic center
and permits a high degree of flexibility.
Length = 350
Score = 32.1 bits (74), Expect = 0.54
Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 256 SLQEAVHFEVPVIGIPF----FGDQNYNVKIIRRLGIGSYMEFEDIHTETLFENIQEILN 311
++ E +P I IP Q N + + + G + E++ E L + E+L+
Sbjct: 264 TVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLS 323
Query: 312 NYDRYKKAVKRASDISK 328
+ +R K + A +++
Sbjct: 324 DPERLKAMAEAARSLAR 340
>gnl|CDD|130673 TIGR01612, 235kDa-fam, reticulocyte binding/rhoptry protein. This
model represents a group of paralogous families in
plasmodium species alternately annotated as reticulocyte
binding protein, 235-kDa family protein and rhoptry
protein. Rhoptry protein is localized on the cell
surface and is extremely large (although apparently
lacking in repeat structure) and is important for the
process of invasion of the RBCs by the parasite. These
proteins are found in P. falciparum, P. vivax and P.
yoelii.
Length = 2757
Score = 30.4 bits (68), Expect = 2.0
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
Query: 288 IGSYMEFEDIHTETLFENIQEILNNYDRYKKAVKRASDISKTQMMSPRDTAVWWVEYLLK 347
IG + D E E I + N Y+ KK + PR + +
Sbjct: 217 IGEMSKIHDPLYEFYKEPIHDDYNPYEISKKDY--------VDCIIPR-----FKKLAPI 263
Query: 348 ADGNVSHLQPEYWHLTWYEYFGLD 371
D +S L+ EY HL +YEY+ +D
Sbjct: 264 IDAAISSLKLEYDHLCYYEYWDID 287
>gnl|CDD|233061 TIGR00629, uvde, UV damage endonuclease UvdE. All proteins in this
family for which functions are known are UV dimer
endonucleases that function in an alternative nucleotide
excision repair process. This family is based on the
phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis,
Stanford University) [DNA metabolism, DNA replication,
recombination, and repair].
Length = 312
Score = 29.9 bits (67), Expect = 2.4
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Query: 275 DQNYNVKIIRRLGIGSYMEFE---DIHTETLFENIQEILNNYDRYKKAVKRASDISKTQM 331
D Y+ +++ + + + + IH F N L R+ + KR S K ++
Sbjct: 134 DLAYHDEMLSAMKLAEQLNKDAVIIIHIGGAFGNKDTTL---ARFHQNYKRLSQSIKERL 190
Query: 332 MSPRDTAVWWVEYLL 346
+ D W VE LL
Sbjct: 191 VLENDDVTWTVEDLL 205
>gnl|CDD|216986 pfam02350, Epimerase_2, UDP-N-acetylglucosamine 2-epimerase. This
family consists of UDP-N-acetylglucosamine 2-epimerases
EC:5.1.3.14 this enzyme catalyzes the production of
UDP-ManNAc from UDP-GlcNAc. Note that some of the
enzymes is this family are bifunctional, and in those
instances Pfam matches only the N-terminal half of the
protein suggesting that the additional C-terminal part
(when compared to mono-functional members of this
family) is responsible for the UPD-N-acetylmannosamine
kinase activity of these enzymes. This hypothesis is
further supported by the assumption that the C-terminal
part of rat UDP-GlcNAc-2-epimerase is the kinase domain.
Length = 346
Score = 29.8 bits (68), Expect = 2.4
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 18/90 (20%)
Query: 199 AILAALARFPDYRIIWKWEN---------EELEGLPSNVICRKWLPQHD---LLAHPNIK 246
L ALA PD +++ N E LE LP N+ + L D LL +
Sbjct: 204 EALKALAERPDVPVVFPVHNNPRTRKRINELLEELP-NIRLIEPLGYLDFLSLLKN--AD 260
Query: 247 LFIT-QGGLQSLQEAVHFEVPVIGIPFFGD 275
L IT GG+Q +EA PV+ + +
Sbjct: 261 LVITDSGGIQ--EEAPSLGKPVLNLRDTTE 288
>gnl|CDD|234875 PRK00957, PRK00957, methionine synthase; Provisional.
Length = 305
Score = 30.0 bits (68), Expect = 2.5
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 300 ETLFENIQEILNNYDRYKKAVKRA 323
ETL + I+ YD YK A++ A
Sbjct: 18 ETLKDKIKGFFGLYDPYKPAIEEA 41
>gnl|CDD|217143 pfam02614, UxaC, Glucuronate isomerase. This is a family of
Glucuronate isomerases also known as D-glucuronate
isomerase, uronic isomerase, uronate isomerase, or
uronic acid isomerase, EC:5.3.1.12. This enzyme
catalyzes the reactions: D-glucuronate <=>
D-fructuronate and D-galacturonate <=> D-tagaturonate.
It is not however clear where the experimental evidence
for this functional assignment came from and thus this
family has no literature reference.
Length = 469
Score = 28.7 bits (65), Expect = 5.9
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 295 EDIHTETLFENIQEILNNYDRYKKAVKRASDISK---TQMMSPRDTAVWWVEYLLKADGN 351
++I FENI EI D YK RA+ + + T S + + W E + K GN
Sbjct: 39 KEIAENKRFENITEIWLAGDHYKWRAMRANGVPEDLITGDASDYEKFLAWAETVPKTIGN 98
Query: 352 VSHLQPEY-W-HLTWYEYFGLD 371
P Y W HL YFG+
Sbjct: 99 -----PLYHWTHLELKRYFGIT 115
>gnl|CDD|234825 PRK00726, murG, undecaprenyldiphospho-muramoylpentapeptide beta-N-
acetylglucosaminyltransferase; Provisional.
Length = 357
Score = 28.2 bits (64), Expect = 8.4
Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 265 VPVIGIPF----FGDQNYNVKIIRRLGIGSYMEFEDIHTETLFENIQEILNNYDRYKKAV 320
+P I +P Q N + + G + D+ E L E + E+L++ +R +
Sbjct: 273 LPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMA 332
Query: 321 KRASDISK 328
+ A + K
Sbjct: 333 EAARALGK 340
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.267 0.0752 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 21,767,817
Number of extensions: 2151726
Number of successful extensions: 1968
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1951
Number of HSP's successfully gapped: 50
Length of query: 406
Length of database: 10,937,602
Length adjustment: 99
Effective length of query: 307
Effective length of database: 6,546,556
Effective search space: 2009792692
Effective search space used: 2009792692
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (26.8 bits)