RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17870
(406 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 104 bits (259), Expect = 3e-25
Identities = 57/319 (17%), Positives = 105/319 (32%), Gaps = 30/319 (9%)
Query: 58 MWIFEYTRPVFPNTIHVGPLHIGDTKPLPQDLAKWVE-----GGKKGAIYFSLGSNVKSA 112
W+ +T + HV I + + + E G + L +
Sbjct: 129 AWLPFWTAGPNSLSTHVYIDEIREKIGVSGIQGREDELLNFIPGMSKVRFRDLQEGIVFG 188
Query: 113 ALEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNVICRKWLPQHDLLGTV------- 165
L + P ++ EEL+ +N + K ++
Sbjct: 189 NLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNIGPFNLITPPPV 248
Query: 166 --DLAKWVEGGKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWENEELEG 223
+ ++ K+ + + + L+ IW ++
Sbjct: 249 VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVH 308
Query: 224 LPS--------NVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGD 275
LP + W PQ ++LAH + F+T G SL E+V VP+I PFFGD
Sbjct: 309 LPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGD 368
Query: 276 QNYNVKIIRR-LGIGSYMEFEDIHTETLFENIQEILNNYDRYKKAVKRASDISKTQMM-- 332
Q N +++ L IG +E L +IL+ ++ KK + + +T
Sbjct: 369 QRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQ-EKGKKLRENLRALRETADRAV 427
Query: 333 ----SPRDTAVWWVEYLLK 347
S + + V+ + K
Sbjct: 428 GPKGSSTENFITLVDLVSK 446
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 89.4 bits (220), Expect = 3e-20
Identities = 24/151 (15%), Positives = 44/151 (29%), Gaps = 5/151 (3%)
Query: 179 IYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNVICRKWLPQHD 238
++ GS+ + +K + W L + +
Sbjct: 240 VHIGFGSSSGRGIADAAKVAVEAIRAQ-GRRVILSRGWTELVLPDDRDDCFAIDEVNFQA 298
Query: 239 LLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIRRLGIGSYMEFEDIH 298
L + I G + A VP + IP DQ Y + LGIG +
Sbjct: 299 LFRR--VAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTPT 356
Query: 299 TETLFENIQEILNNYDRYKKAVKRASDISKT 329
E+L + +L + + + + T
Sbjct: 357 FESLSAALTTVLA--PETRARAEAVAGMVLT 385
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 87.1 bits (214), Expect = 2e-19
Identities = 36/291 (12%), Positives = 70/291 (24%), Gaps = 12/291 (4%)
Query: 58 MWIFEYTRPVFPNTIHVGPLHIGDTKPLPQDLAKWVEGGKKGAIYFSLGSNVKSAALEDS 117
+ F V PL T+ A+W + + N A+
Sbjct: 121 FYAFHCPSYVPSPYYPPPPLGEPSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLP 180
Query: 118 KRTAILAALARFPDYRIIWKWENEELEGLPSNVICRKWLPQHDLLGTVDLAKWVEGGKKG 177
+ + L+ + + D
Sbjct: 181 PVE-DIFTFGYTDHPWVAADPVLAPLQPTDLDAVQTGAWILPDERPLSPELAAFLDAGPP 239
Query: 178 AIYFSLGSNVKSAALEDSKRTAILAALARFP-DYRIIWKWENEELEGLPSNVICRKWLPQ 236
+Y GS A + A+ + W + L ++ +
Sbjct: 240 PVYLGFGSLGAPADAVR----VAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVNH 295
Query: 237 HDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVKIIRRLGIGSYMEFED 296
L + I GG + A P I +P DQ Y + LG+G +
Sbjct: 296 QVLFGR--VAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPI 353
Query: 297 IHTETLFENIQEILNNYDRYKKAVKRASDISKTQMMSPRDTAVWWVEYLLK 347
++L + L + +T A ++ + +
Sbjct: 354 PTFDSLSAALATALT--PETHARATAVAGTIRTD--GAAVAARLLLDAVSR 400
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 85.2 bits (209), Expect = 1e-18
Identities = 34/140 (24%), Positives = 64/140 (45%), Gaps = 4/140 (2%)
Query: 190 AALEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNVICRKWLPQHDLLAHPNIKLFI 249
L + K++ + + + +E + + W PQ +L HP+I F+
Sbjct: 311 WGLANCKKSFLWI-IRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFL 369
Query: 250 TQGGLQSLQEAVHFEVPVIGIPFFGDQNYNVK-IIRRLGIGSYMEFEDIHTETLFENIQE 308
T G S E++ VP++ PFF DQ + + I IG ++ ++ E L + I E
Sbjct: 370 THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINE 428
Query: 309 ILNNYDRYKKAVKRASDISK 328
++ D+ KK ++A ++ K
Sbjct: 429 VIAG-DKGKKMKQKAMELKK 447
Score = 40.9 bits (94), Expect = 2e-04
Identities = 18/196 (9%), Positives = 50/196 (25%), Gaps = 11/196 (5%)
Query: 1 MSFYYRLEGYLYLLYARLVLAPRIFSAQDALAKKYFGSSCPSTKDMVRNRSLLLSSSMWI 60
+ + R ++ + + + F + + + + +
Sbjct: 192 IVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINALSSTIPSIYP-IGP 250
Query: 61 FEYTRPVFPNTIHVGPLHIGDTKPLPQDLAKWVEGGKKGAIYFSLGSNVKS--------- 111
P + L K + L +Y + GS
Sbjct: 251 LPSLLKQTPQIHQLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFA 310
Query: 112 AALEDSKRTAILAALARFPDYRIIWKWENEELEGLPSNVICRKWLPQHDLLGTVDLAKWV 171
L + K++ + + + +E + + W PQ +L + ++
Sbjct: 311 WGLANCKKSFLWI-IRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFL 369
Query: 172 EGGKKGAIYFSLGSNV 187
+ S+ + V
Sbjct: 370 THCGWNSTTESICAGV 385
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 78.9 bits (193), Expect = 9e-17
Identities = 25/209 (11%), Positives = 53/209 (25%), Gaps = 16/209 (7%)
Query: 129 FPDYRIIWKWENEELEGLPSNVICRKWLPQHDLLGTVDLAK-------WVEGGKKGAIYF 181
+ L P R G L G+
Sbjct: 165 VEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPLSAELEAFLAAGSTPV 224
Query: 182 SLGSNVKSAALEDSKRTAILAALARFPDYRIIWK-WENEELEGLPSNVICRKWLPQHDLL 240
+G S + A+ ++ + W + L ++ + +L
Sbjct: 225 YVGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVNLQELF 284
Query: 241 AHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGD----QNYNVKIIRRLGIGSYMEFED 296
+ I + A+ +P I + D Q Y+ + LG+G ++
Sbjct: 285 GR--VAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPV 342
Query: 297 IHTETLFENIQEILNNYDRYKKAVKRASD 325
++L + L + +D
Sbjct: 343 PTIDSLSAALDTALA--PEIRARATTVAD 369
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 75.9 bits (185), Expect = 1e-15
Identities = 31/178 (17%), Positives = 70/178 (39%), Gaps = 16/178 (8%)
Query: 166 DLAKWVEGGKKGAIYFSLGSNVKSAALEDSKRTAILAALARFPDYRIIWKWEN------- 218
+ KW++ ++ F + S+ I L +
Sbjct: 263 LILKWLDEQPDKSVVFL-CFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEG 321
Query: 219 -EELEGLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQN 277
E L + W PQ ++LAH I F++ G S+ E++ F VP++ P + +Q
Sbjct: 322 FLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQ 381
Query: 278 YNVK-IIRRLGIGSYM------EFEDIHTETLFENIQEILNNYDRYKKAVKRASDISK 328
N +++ G+G + + + E + + ++++++ K V+ ++S+
Sbjct: 382 LNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSR 439
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 74.4 bits (181), Expect = 4e-15
Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 5/116 (4%)
Query: 217 ENEELEGLPSNVICRKWLPQHDLLAHPNIKLFITQGGLQSLQEAVHFEVPVIGIPFFGDQ 276
+ W PQ +LAHP+ F+T G S E+V +P+I P + +Q
Sbjct: 325 PGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQ 384
Query: 277 NYNVKII-RRLGIGSYMEFEDIHT---ETLFENIQEILNNYDRYKKAVKRASDISK 328
N ++ + D E + ++ ++ + K + ++ +
Sbjct: 385 KMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEG-EEGKGVRNKMKELKE 439
Score = 29.0 bits (63), Expect = 1.3
Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 28/130 (21%)
Query: 58 MWIFEYTRPVFPNTIHVGPLHIGDTKPLPQDLAKWVEGGKKGAIYFSLGSNVKSAALEDS 117
PV+P V + + KW++ G++ + S
Sbjct: 222 QEPGLDKPPVYPVGPLVNIGKQEAKQTEESECLKWLDNQPLGSVLYVSFG---SGGTLTC 278
Query: 118 KRTAILAALARFPDYRIIWKW----------------ENEELEGLPS---------NVIC 152
++ LA + R +W + + L LP +
Sbjct: 279 EQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVI 338
Query: 153 RKWLPQHDLL 162
W PQ +L
Sbjct: 339 PFWAPQAQVL 348
>d1j5sa_ c.1.9.8 (A:) Uronate isomerase TM0064 {Thermotoga maritima
[TaxId: 2336]}
Length = 451
Score = 35.3 bits (81), Expect = 0.011
Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
Query: 295 EDIHTETLFENIQEILNNYDRYKKAVKRASDISK---TQMMSPRDTAVWWVEYLLKADGN 351
+DI + +I E+ D Y + R +S+ T S ++ + + + GN
Sbjct: 37 KDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVGN 96
Query: 352 VSHLQPEYWHLTWYEYFGLDVYL 374
++ E+ HL + F + +
Sbjct: 97 PTY---EWIHLDLWRRFNIKKVI 116
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 27.8 bits (61), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 132 YRIIWKWENEELEGLP-SNVICRKWLPQHD 160
I+ K + ++LEG V+ RK+LP D
Sbjct: 301 LEIVLKGDEKDLEGKALLKVVMRKFLPAAD 330
Score = 27.8 bits (61), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 210 YRIIWKWENEELEGLP-SNVICRKWLPQHD 238
I+ K + ++LEG V+ RK+LP D
Sbjct: 301 LEIVLKGDEKDLEGKALLKVVMRKFLPAAD 330
>d1mbma_ b.47.1.3 (A:) NSP4 proteinase {Equine arteritis virus, EAV
[TaxId: 11047]}
Length = 198
Score = 26.4 bits (58), Expect = 5.8
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 63 YTRPVFPNTIHVGPLHIGDTKPLPQDLAKWVEG 95
+T P+ + I D +P+ LA ++G
Sbjct: 161 FTGPLTSIPKDIPDNIIADVDAVPRSLAMLIDG 193
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.435
Gapped
Lambda K H
0.267 0.0389 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,653,776
Number of extensions: 79871
Number of successful extensions: 221
Number of sequences better than 10.0: 1
Number of HSP's gapped: 217
Number of HSP's successfully gapped: 22
Length of query: 406
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 319
Effective length of database: 1,213,086
Effective search space: 386974434
Effective search space used: 386974434
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.5 bits)