BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17871
(189 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 137 bits (344), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 1 MGQSESQFTEEELQDYEDLTYFTKKEIL-AHQKFKSLAPEK---VGHNKNAKLPMTKILL 56
MG S S+ ++E L +Y+DLT+ TK+EIL AH++F L P++ V + A++P +IL
Sbjct: 24 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS 83
Query: 57 YPQLRVNPFGDRICHIFSSSHDGDC-TFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGD 115
P+L+ NPF +RIC +FS+S D +FEDFLD++SVFS++A +K+ +AFRIFDFD D
Sbjct: 84 LPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 143
Query: 116 DMLGMTDLKQIIDRLTGTH---HLSDNDIQHLIQNIXXXXXXXXXXXXSFAEFELFIEKS 172
L DL ++++ LTG LS ++++ LI NI + +EF+ I +S
Sbjct: 144 GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 203
Query: 173 QDFA 176
DFA
Sbjct: 204 PDFA 207
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 130 bits (327), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 112/176 (63%), Gaps = 8/176 (4%)
Query: 9 TEEELQDYEDLTYFTKKEIL-AHQKFKSLAPEK---VGHNKNAKLPMTKILLYPQLRVNP 64
++E L +Y+DLT+ TK+EIL AH++F L P++ V + A++P +IL P+L+ NP
Sbjct: 1 SKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANP 60
Query: 65 FGDRICHIFSSSHDGDC-TFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDL 123
F +RIC +FS+S D +FEDFLD++SVFS++A +K+ +AFRIFDFD D L DL
Sbjct: 61 FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDL 120
Query: 124 KQIIDRLTGT---HHLSDNDIQHLIQNIXXXXXXXXXXXXSFAEFELFIEKSQDFA 176
++++ LTG LS ++++ LI NI + +EF+ I +S DFA
Sbjct: 121 SRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSPDFA 176
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 59.7 bits (143), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 39 EKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAP 98
+K+ + + L + + + P+L+ NP R+ IF + +G+ F++F++ +S FS
Sbjct: 13 KKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD 72
Query: 99 KPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQNIXXXXXXXXXX 158
K K AFRI+D D D + +L Q++ + G ++L D +Q ++
Sbjct: 73 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVG-NNLKDTQLQQIVDKTIINADKDGDG 131
Query: 159 XXSFAEF 165
SF EF
Sbjct: 132 RISFEEF 138
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 39 EKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAP 98
+K+ + + L + + + P+L+ NP R+ IF + +G+ F++F++ +S FS
Sbjct: 14 KKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD 73
Query: 99 KPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQNIXXXXXXXXXX 158
K K AFRI+D D D + +L Q++ + G ++L D +Q ++
Sbjct: 74 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVG-NNLKDTQLQQIVDKTIINADKDGDG 132
Query: 159 XXSFAEF 165
SF EF
Sbjct: 133 RISFEEF 139
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 39 EKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAP 98
+K+ + + L + + + P+L+ NP R+ IF + +G+ F++F++ +S FS
Sbjct: 27 KKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD 86
Query: 99 KPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQNIXXXXXXXXXX 158
K K AFRI+D D D + +L Q++ + G ++L D +Q ++
Sbjct: 87 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVG-NNLKDTQLQQIVDKTIINADKDGDG 145
Query: 159 XXSFAEF 165
SF EF
Sbjct: 146 RISFEEF 152
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 39 EKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAP 98
+K+ + + L + + + P+L+ NP R+ IF + +G+ F++F++ +S FS
Sbjct: 28 KKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD 87
Query: 99 KPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQNIXXXXXXXXXX 158
K K AFRI+D D D + +L Q++ + G ++L D +Q ++
Sbjct: 88 KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVG-NNLKDTQLQQIVDKTIINADKDGDG 146
Query: 159 XXSFAEF 165
SF EF
Sbjct: 147 RISFEEF 153
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 23/188 (12%)
Query: 1 MGQSESQF-TEEELQDYEDLTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYP 58
MG S +EEL++ + T F+ +I + +F SL +N L P
Sbjct: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSL-----DKGENGTLSREDFQRIP 55
Query: 59 QLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSE----------SAPKPVKAEH--- 105
+L +NP GDRI + F S + F F+ ++ F + P+P+ +
Sbjct: 56 ELAINPLGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKL 115
Query: 106 --AFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQNIXXXXXXXXXXXXSFA 163
AFR++D D DD + +L Q++ + G ++SD + + SF
Sbjct: 116 HFAFRLYDLDKDDKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 164 EFELFIEK 171
EF +EK
Sbjct: 175 EFVKVLEK 182
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 78/188 (41%), Gaps = 23/188 (12%)
Query: 1 MGQSESQF-TEEELQDYEDLTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYP 58
MG S +EEL++ + T F+ +I + +F SL +N L P
Sbjct: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSL-----DKGENGTLSREDFQRIP 55
Query: 59 QLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSE----------SAPKPVKAEH--- 105
+L +NP GDRI + F + F F+ ++ F + P+P+ +
Sbjct: 56 ELAINPLGDRIINAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKL 115
Query: 106 --AFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQNIXXXXXXXXXXXXSFA 163
AFR++D D D+ + +L Q++ + G ++SD + + SF
Sbjct: 116 HFAFRLYDLDKDEKISRDELLQVLRMMVGV-NISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 164 EFELFIEK 171
EF +EK
Sbjct: 175 EFVKVLEK 182
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 16 YED------LTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDR 68
YED +T FT +E+ A ++ FK L+ + K L + R N F DR
Sbjct: 19 YEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADR 78
Query: 69 ICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQII 127
I +F +G F +F+ + VF SAP K + AF+++D + +LK+++
Sbjct: 79 IFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 1 MGQSESQFTEEELQDYEDLTYFTKKEILAHQKFKSLAPE-KVGHNKNAKLPMTKILLYPQ 59
MG+S S+ E +++ TYFT+KE+ Q +K + G A +P
Sbjct: 1 MGKSNSKLKPEVVEELTRKTYFTEKEV--QQWYKGFIKDCPSGQLDAAGFQKIYKQFFPF 58
Query: 60 LRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLG 119
F + ++F + DG F +F+ +SV S K AF+++D D D +
Sbjct: 59 GDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDE-KLRWAFKLYDLDNDGYIT 117
Query: 120 MTDLKQIIDRL 130
++ I+D +
Sbjct: 118 RNEMLDIVDAI 128
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 16 YED------LTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDR 68
YED +T FT +E+ A ++ FK L+ + K L + R N F DR
Sbjct: 19 YEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRNRNRRNLFADR 78
Query: 69 ICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQII 127
I +F +G F +F+ + VF SAP K + AF+++D + +LK+++
Sbjct: 79 IFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMV 137
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 2 GQSESQFTEEELQDYEDLTYFTKKEILAHQKFKSLAPE-KVGHNKNAKLPMTKILLYPQL 60
G+S+S+ ++++LQD T F KKE+ Q +K + GH ++ +P
Sbjct: 2 GKSQSKLSQDQLQDLVRSTRFDKKEL--QQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFG 59
Query: 61 RVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGM 120
+ F + + ++F + +G F++F+ +SV S K AF+++D D + ++
Sbjct: 60 DPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELND-KLIWAFQLYDLDNNGLISY 118
Query: 121 TDLKQIIDRL 130
++ +I+D +
Sbjct: 119 DEMLRIVDAI 128
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 20 TYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHD 78
T F+ EI A ++ FK ++ + K L + + F DR+ +F + H+
Sbjct: 9 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHN 68
Query: 79 GDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQII 127
G FE+F +SVF +AP K +F+++D + ++KQ++
Sbjct: 69 GILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMV 117
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 20 TYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHD 78
T F+ EI A ++ FK ++ + K L + + F DR+ +F + H+
Sbjct: 40 TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHN 99
Query: 79 GDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQII 127
G FE+F +SVF +AP K +F+++D + ++KQ++
Sbjct: 100 GILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMV 148
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 23/169 (13%)
Query: 20 TYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHD 78
T F++ +L H +F++L NK L + L VNP GDRI F
Sbjct: 21 TGFSQASLLRLHHRFRAL-----DRNKKGYLSRMDLQQIGALAVNPLGDRIIESFFPDGS 75
Query: 79 GDCTFEDFLDMMSVFS-----------ESAPKPV-----KAEHAFRIFDFDGDDMLGMTD 122
F F+ +++ F P+P+ K +AF+++D D D + +
Sbjct: 76 QRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHE 135
Query: 123 LKQIIDRLTGTHHLSDNDIQHLIQNIXXXXXXXXXXXXSFAEFELFIEK 171
+ Q++ + G +++ ++++ SF EF +EK
Sbjct: 136 MLQVLRLMVGV-QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 1 MGQSESQFTEEELQDYEDLTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYPQ 59
MG+ S+ E +QD + T FT+ EI ++ F P GH + +P
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS--GHLSMEEFKKIYGNFFPY 58
Query: 60 LRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLG 119
+ F + + F ++ DG F +F+ +SV S + K + AF ++D DG+ +
Sbjct: 59 GDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQ-KLKWAFSMYDLDGNGYIS 117
Query: 120 MTDLKQII 127
++ +I+
Sbjct: 118 KAEMLEIV 125
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 79 GDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
G + E+F + F AEH FR FD +GD G D ++ I L+ T
Sbjct: 41 GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGD---GTIDFREFIIALSVTSR 94
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 7/126 (5%)
Query: 11 EELQDYEDLTYFTKKEI-LAHQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDRI 69
E L+ E + FTKKE+ + ++ FK+ P V + + K ++ +PQ + +
Sbjct: 50 EALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQ--FFPQGDSTTYAHFL 107
Query: 70 CHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLG---MTDLKQI 126
+ F + H+G +FEDF+ +S+ + K AF ++D + D + M D+ +
Sbjct: 108 FNAFDTDHNGAVSFEDFIKGLSILLRGTVQE-KLNWAFNLYDINKDGYITKEEMLDIMKA 166
Query: 127 IDRLTG 132
I + G
Sbjct: 167 IYDMMG 172
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 77 HDGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ RL
Sbjct: 57 RDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRL--GE 114
Query: 135 HLSDNDIQHLIQ 146
LSD ++ +I+
Sbjct: 115 KLSDEEVDEMIR 126
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + + AFR+FD DG+ + +L+ ++ L
Sbjct: 359 DGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 416
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 417 LTDEEVDEMIR 427
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 35.4 bits (80), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DGD T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 358 DGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 415
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 416 LTDEEVDEMIR 426
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 79 GDCTFEDFLDMMS--VFSESAPKPVKAE--HAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
G F+DF+++M + +E+A E AFR FD +GD + ++L++ + +L G H
Sbjct: 76 GHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG-H 134
Query: 135 HLSDNDIQHLIQNI 148
+ DI+ +I+++
Sbjct: 135 QVGHRDIEEIIRDV 148
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DGD T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 359 DGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 416
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 417 LTDEEVDEMIR 427
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DGD T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 350 DGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 407
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 408 LTDEEVDEMIR 418
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 79 GDCTFEDFLDMMS--VFSESAPKPVKAE--HAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
G F+DF+++M + +E+A E AFR FD +GD + ++L++ + +L G H
Sbjct: 62 GHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG-H 120
Query: 135 HLSDNDIQHLIQNI 148
+ DI+ +I+++
Sbjct: 121 QVGHRDIEEIIRDV 134
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DGD T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 358 DGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 415
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 416 LTDEEVDEMIR 426
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DGD T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 358 DGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 415
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 416 LTDEEVDEMIR 426
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 7/146 (4%)
Query: 1 MGQSES-QFTEEELQDYEDLTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYP 58
MG S+S ++E L++ + T FT++E+ + +Q F P G + +P
Sbjct: 1 MGNSKSGALSKEILEELQLNTKFTEEELSSWYQSFLKECPS--GRITRQEFQTIYSKFFP 58
Query: 59 QLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDML 118
+ + + F ++ DG F++++ + + S + K E AF ++D DG+ +
Sbjct: 59 EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTS-AGKTNQKLEWAFSLYDVDGNGTI 117
Query: 119 GMTDLKQIIDRLTGTHHLSDNDIQHL 144
++ +I+ + +S D +HL
Sbjct: 118 SKNEVLEIVTAI--FKMISPEDTKHL 141
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ DG F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL++M+ + K + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 67 DRICHIFSSSHDGDCTFEDFLDMM-SVFSESAPKPVKAEHA--FRIFDFDGDDMLGMTDL 123
D I G FE+FL MM E A + E A FRIFD + D + + +L
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEEL 118
Query: 124 KQIIDRLTGTHHLSDNDIQHLIQN 147
+I+ R TG H+++ DI+ L+++
Sbjct: 119 GEIL-RATG-EHVTEEDIEDLMKD 140
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 34.3 bits (77), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 67 DRICHIFSSSHDGDCTFEDFLDMM-SVFSESAPKPVKAEHA--FRIFDFDGDDMLGMTDL 123
D I G FE+FL MM E A + E A FRIFD + D + + +L
Sbjct: 56 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEEL 115
Query: 124 KQIIDRLTGTHHLSDNDIQHLIQN 147
+I+ R TG H+++ DI+ L+++
Sbjct: 116 GEIL-RATG-EHVTEEDIEDLMKD 137
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 67 DRICHIFSSSHDGDCTFEDFLDMM-SVFSESAPKPVKAEHA--FRIFDFDGDDMLGMTDL 123
D I G FE+FL MM E A + E A FRIFD + D + + +L
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEEL 118
Query: 124 KQIIDRLTGTHHLSDNDIQHLIQN 147
+I+ R TG H+++ DI+ L+++
Sbjct: 119 GEIL-RATG-EHVTEEDIEDLMKD 140
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 359 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 416
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 417 LTDEEVDEMIR 427
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 359 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 416
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 417 LTDEEVDEMIR 427
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 360 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 417
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 418 LTDEEVDEMIR 428
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 322 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 379
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 380 LTDEEVDEMIR 390
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 33.9 bits (76), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 325 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 382
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 383 LTDEEVDEMIR 393
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 78 DGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLS 137
+G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L L+
Sbjct: 327 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEKLT 384
Query: 138 DNDIQHLIQ 146
D ++ +I+
Sbjct: 385 DEEVDEMIR 393
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 33.9 bits (76), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 79 GDCTFEDFLDMMS--VFSESAPKPVKAE--HAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
G F+DF+++M + +E+A E AFR FD +GD + ++L++ + L G H
Sbjct: 62 GHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLG-H 120
Query: 135 HLSDNDIQHLIQNI 148
+ DI+ +I+++
Sbjct: 121 QVGHRDIEEIIRDV 134
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 8/130 (6%)
Query: 1 MGQSESQFTEEELQDYEDLTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKIL--LY 57
MG S+ ++++L + TYF ++EI H+ F P + A+ KI +
Sbjct: 1 MGAKTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPS----GQLAREDFVKIYKQFF 56
Query: 58 PQLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDM 117
P F + + +F ++G FE+F+ ++S S + K AF ++D + D
Sbjct: 57 PFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE-KLSWAFELYDLNHDGY 115
Query: 118 LGMTDLKQII 127
+ ++ I+
Sbjct: 116 ITFDEMLTIV 125
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 33.9 bits (76), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 359 DGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 416
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 417 LTDEEVDEMIR 427
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 33.5 bits (75), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + + ++ AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDSEEEIR--EAFRVFDKDGNGFISAAELRHVMTNL--GE 112
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 113 KLTDEEVDEMIR 124
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 55 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 112
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 113 KLTDEEVDEMIR 124
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 33.5 bits (75), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 55 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 112
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 113 KLTDEEVDEMIR 124
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 33.5 bits (75), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDQMIR 127
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 55 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 112
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 113 KLTDEEVDEMIR 124
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 33.5 bits (75), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 53 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 110
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 111 KLTDEEVDEMIR 122
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 33.5 bits (75), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 54 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 111
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 112 KLTDEEVDEMIR 123
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 67 DRICHIFSSSHDGDCTFEDFLDMM-SVFSESAPKPVKAE--HAFRIFDFDGDDMLGMTDL 123
D I G FE+FL MM E A + E FRIFD + D + + +L
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEEL 118
Query: 124 KQIIDRLTGTHHLSDNDIQHLIQN 147
+I+ R TG H+++ DI+ L+++
Sbjct: 119 GEIL-RATG-EHVTEEDIEDLMKD 140
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 59 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 116
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 117 KLTDEEVDEMIR 128
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 33.5 bits (75), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 59 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNL--GEK 116
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 117 LTDEEVDEMIR 127
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 62 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GEK 119
Query: 136 LSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 120 LTDEEVDEMIR 130
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 63 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 120
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 121 KLTDEEVDEMIR 132
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 33.1 bits (74), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 33.1 bits (74), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 33.1 bits (74), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 33.1 bits (74), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 56 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 113
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 114 KLTDEEVDEMIR 125
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 33.1 bits (74), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL++M+ + + + AFR+FD DG+ + +L+ ++ L
Sbjct: 54 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL--GE 111
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 112 KLTDEEVDEMIR 123
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 XLTDEEVDEMIR 127
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 XLTDEEVDEMIR 126
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL++M+ + + + AFR+FD DG+ + +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 115 KLTDEEVDEMIR 126
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 67 DRICHIFSSSHDGDCTFEDFLDMM-SVFSESAPKPVKAEHA--FRIFDFDGDDMLGMTDL 123
D I G FE+FL MM E A + E A FRIFD + D + + +L
Sbjct: 59 DAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEEL 118
Query: 124 KQIIDRLTGTHHLSDNDIQHLIQN 147
+I+ R TG H+ + DI+ L+++
Sbjct: 119 GEIL-RATG-EHVIEEDIEDLMKD 140
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 3 QSESQFTEEELQDYEDLTYFTKKEILAHQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRV 62
Q ++FTEEEL + +Q F P G + +P+
Sbjct: 17 QLNTKFTEEELSSW-------------YQSFLKECPS--GRITRQEFQTIYSKFFPEADP 61
Query: 63 NPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTD 122
+ + F ++ DG F++++ + + S + K E AF ++D DG+ + +
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTS-AGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 123 LKQIIDRLTGTHHLSDNDIQHL 144
+ +I+ + +S D +HL
Sbjct: 121 VLEIVTAI--FKMISPEDTKHL 140
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 3 QSESQFTEEELQDYEDLTYFTKKEILAHQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRV 62
Q ++FTEEEL + +Q F P G + +P+
Sbjct: 17 QLNTKFTEEELSSW-------------YQSFLKECPS--GRITRQEFQTIYSKFFPEADP 61
Query: 63 NPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTD 122
+ + F ++ DG F++++ + + S + K E AF ++D DG+ + +
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTS-AGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 123 LKQIIDRLTGTHHLSDNDIQHL 144
+ +I+ + +S D +HL
Sbjct: 121 VLEIVTAI--FKMISPEDTKHL 140
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 3 QSESQFTEEELQDYEDLTYFTKKEILAHQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRV 62
Q ++FTEEEL + +Q F P G + +P+
Sbjct: 17 QLNTKFTEEELSSW-------------YQSFLKECPS--GRITRQEFQTIYSKFFPEADP 61
Query: 63 NPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTD 122
+ + F ++ DG F++++ + + S + K E AF ++D DG+ + +
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTS-AGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 123 LKQIIDRLTGTHHLSDNDIQHL 144
+ +I+ + +S D +HL
Sbjct: 121 VLEIVTAI--FKMISPEDTKHL 140
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 79 GDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSD 138
G FE+FL MM+ + AFR+FD D + + DL+++ L +L++
Sbjct: 79 GTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKEL--GENLTE 136
Query: 139 NDIQHLI 145
++Q +I
Sbjct: 137 EELQEMI 143
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 18/142 (12%)
Query: 3 QSESQFTEEELQDYEDLTYFTKKEILAHQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRV 62
Q ++FTEEEL + +Q F P G + +P+
Sbjct: 17 QLNTKFTEEELSSW-------------YQSFLKECPS--GRITRQEFQTIYSKFFPEADP 61
Query: 63 NPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTD 122
+ + F ++ DG F+ ++ + + S + K E AF ++D DG+ + +
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKQYVIALHMTS-AGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 123 LKQIIDRLTGTHHLSDNDIQHL 144
+ +I+ + +S D +HL
Sbjct: 121 VLEIVTAI--FKMISPEDTKHL 140
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
Query: 11 EELQDYEDLTYFTKKEILA-HQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDRI 69
E L + T FTKKE+ + ++ FK+ P + KL ++ +PQ + +
Sbjct: 77 EGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQ--FFPQGDATTYAHFL 134
Query: 70 CHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQII 127
+ F + +G FEDF+ +S+ K + AF ++D + D + ++ I+
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHE-KLKWAFNLYDINKDGCITKEEMLAIM 191
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 18/142 (12%)
Query: 3 QSESQFTEEELQDYEDLTYFTKKEILAHQKFKSLAPEKVGHNKNAKLPMTKILLYPQLRV 62
Q ++FTEEEL + +Q F P G + +P+
Sbjct: 17 QLNTKFTEEELSSW-------------YQSFLKECPS--GRITRQEFQTIYSKFFPEADP 61
Query: 63 NPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTD 122
+ + F ++ DG F+ ++ + + S + K E AF ++D DG+ + +
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKQYVIALHMTS-AGKTNQKLEWAFSLYDVDGNGTISKNE 120
Query: 123 LKQIIDRLTGTHHLSDNDIQHL 144
+ +I+ + +S D +HL
Sbjct: 121 VLEIVTAI--FKMISPEDTKHL 140
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL +M+ + + AF++FD DG+ ++ +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D+++ +I+
Sbjct: 115 KLTDDEVDEMIR 126
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL +M+ + + AF++FD DG+ ++ +L+ ++ L
Sbjct: 57 ADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D+++ +I+
Sbjct: 115 KLTDDEVDEMIR 126
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 30.8 bits (68), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 75 SSHDGDCTFEDFLDMMSV-FSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGT 133
+ +G F +FL MM+ ++ + ++ AFR+FD DG+ + +L+ ++ L
Sbjct: 53 ADGNGTIDFPEFLTMMARKMKDTDSEEIR--EAFRVFDKDGNGYISAAELRHVMTNL--G 108
Query: 134 HHLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 109 EKLTDEEVDEMIR 121
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 83 FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQ 142
F +FL +MS +S + AF++FD +GD ++ +LK ++ + L+D ++
Sbjct: 66 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI--GEKLTDAEVD 123
Query: 143 HLIQNI 148
+++ +
Sbjct: 124 DMLREV 129
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 79 GDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSD 138
G FE+FL MM+ + AFR+FD D + +LK++ L +++D
Sbjct: 59 GTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKEL--GENMTD 116
Query: 139 NDIQHLI 145
++Q +I
Sbjct: 117 EELQEMI 123
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 30.4 bits (67), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
Query: 74 SSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGT 133
+ +G F FL MM+ + + AFR+F DG+ + L+ ++ L
Sbjct: 357 GADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNL--G 414
Query: 134 HHLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 415 EKLTDEEVDEMIR 427
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 30.4 bits (67), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 83 FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQ 142
F +FL +MS +S + AF++FD +GD ++ +LK ++ + L+D ++
Sbjct: 65 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI--GEKLTDAEVD 122
Query: 143 HLIQNI 148
+++ +
Sbjct: 123 DMLREV 128
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
++++G F +F +M+ + AF+IFD DGD + +L+ ++ L
Sbjct: 57 NNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINL--GE 114
Query: 135 HLSDNDIQHLIQ 146
++D +I +I+
Sbjct: 115 KVTDEEIDEMIR 126
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 30.0 bits (66), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 106 AFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQNI 148
AFR FD +GD + ++L++ + +L G H + DI+ +I+++
Sbjct: 12 AFREFDTNGDGEISTSELREAMRKLLG-HQVGHRDIEEIIRDV 53
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 30.0 bits (66), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRL 130
+ +G F +FL MM+ + + AFR+FD DG+ + +L+ ++ L
Sbjct: 12 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 63 NPFGDRICHIFSS-SHDGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLG 119
NP + + + S DG+ T F++FL +M+ + + + AF++FD D + +
Sbjct: 42 NPTEEELQDMISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYIS 101
Query: 120 MTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
++L+ ++ L L+D +++ +I+
Sbjct: 102 ASELRHVMINL--GEKLTDEEVEQMIK 126
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 83 FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQ 142
F +FL +MS + + AF++FD +GD ++ +LK ++ + L+D ++
Sbjct: 66 FSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI--GEKLTDAEVD 123
Query: 143 HLIQNI 148
+++ +
Sbjct: 124 EMLREV 129
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 83 FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQII 127
F +FL +MS +S + AF++FD +GD ++ +LK ++
Sbjct: 65 FSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL 109
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 79 GDCTFEDFLDMMSVFSESAPKPVKAE--HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHL 136
G F DFL +M+ + + K K E AF++FD D + +LK++ L +L
Sbjct: 57 GKMNFGDFLTVMT--QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL--GENL 112
Query: 137 SDNDIQHLI 145
+D ++Q +I
Sbjct: 113 TDEELQEMI 121
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL++M+ + + + AFR+FD D + + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 28.9 bits (63), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL++M+ + + + AFR+FD D + + +L+ ++ L
Sbjct: 58 ADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL--GE 115
Query: 135 HLSDNDIQHLIQ 146
L+D ++ +I+
Sbjct: 116 KLTDEEVDEMIR 127
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AFR+FD DG+ + DL+ ++ L L+D ++ +I+
Sbjct: 11 EAFRVFDKDGNGYISAADLRHVMTNL--GEKLTDEEVDEMIR 50
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 56 LYPQLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKP-VKAEHAFRIFDFDG 114
+P + + F S+ DG F+++ ++++ +A K K E AF ++D DG
Sbjct: 63 FFPDTDPKAYAQHVFRSFDSNLDGTLDFKEY--VIALHXTTAGKTNQKLEWAFSLYDVDG 120
Query: 115 DDMLGMTDLKQII 127
+ + ++ +I+
Sbjct: 121 NGTISKNEVLEIV 133
>pdb|3TC2|A Chain A, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|B Chain B, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|C Chain C, Crystal Structure Of Potato Serine Protease Inhibitor
Length = 187
Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 41 VGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHDGDCTFEDFLDMMSV-FSESAPK 99
+G + N+ P + V P G + I SSSH G FED +++++ F+ S K
Sbjct: 38 LGKSPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFED--ELLNIQFAISTSK 95
Query: 100 PVKAEHAFRIFDFD 113
+ +++ D+D
Sbjct: 96 MCVSYTIWKVGDYD 109
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AFR+FD DG+ + +L+ ++ L L+D ++ +I+
Sbjct: 6 EAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIR 45
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
+ +G F +FL + + + AFR+FD DG+ + +L+ + L
Sbjct: 57 ADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL--GE 114
Query: 135 HLSDNDIQHLIQ 146
L+D ++ I+
Sbjct: 115 KLTDEEVDEXIR 126
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AFR+FD DG+ + +L+ ++ L L+D ++ +I+
Sbjct: 9 EAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIR 48
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AFR+FD DG+ + +L+ ++ L L+D ++ +I+
Sbjct: 13 EAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIR 52
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 27.7 bits (60), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/80 (21%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 67 DRICHIFSSSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQI 126
+++ H++ +H G+ TF++F D+ + FR D GD L +++
Sbjct: 66 EKLLHMYDKNHSGEITFDEFKDLHHFI-------LSMREGFRKRDSSGDGRLDSNEVRAA 118
Query: 127 IDRLTGTHHLSDNDIQHLIQ 146
+ L+ + +S+ Q L++
Sbjct: 119 L--LSSGYQVSEQTFQALMR 136
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AFR+FD DG+ + +L+ ++ L L+D ++ +I+
Sbjct: 12 EAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIR 51
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 106 AFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AF++FD DG+ ++ +L+ ++ L L+D+++ +I+
Sbjct: 13 AFKVFDRDGNGLISAAELRHVMTNL--GEKLTDDEVDEMIR 51
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 27.3 bits (59), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AFR+FD DG+ + +L+ ++ L L+D ++ +I+
Sbjct: 10 EAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIR 49
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQ 146
AFR+FD DG+ + +L+ ++ L L+D ++ +I+
Sbjct: 9 EAFRVFDKDGNGYISAAELRHVMTNL--GEKLTDEEVDEMIR 48
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Query: 105 HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHLIQN 147
+ FRIFD + D + + +L +I+ R TG H + + DI+ L+++
Sbjct: 14 NCFRIFDKNADGFIDIEELGEIL-RATGEHVIEE-DIEDLMKD 54
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 81 CTFEDFLDMMSVFSESAPKPVKAE--HAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSD 138
F DFL +M+ + + K K E AF++FD D + +LK++ L +L+D
Sbjct: 1 MNFGDFLTVMT--QKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKEL--GENLTD 56
Query: 139 NDIQHLI 145
++Q +I
Sbjct: 57 EELQEMI 63
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 26.9 bits (58), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Query: 31 QKFKS--LAPEKVGHNKNAKLPMTKILLYPQLRVNPFGDRICHIFSSSHDGDCTFEDFLD 88
QK K+ L ++ G KL + K L L + P D + S G+ + +FL
Sbjct: 55 QKLKAAFLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQIDSDGSGNIDYTEFLA 114
Query: 89 MMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHHLSDNDIQHL 144
+ + K + AFR+FD D D + +L ++ ++++ D+ +
Sbjct: 115 AAIDRRQLSKKLIYC--AFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQV 168
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 26.9 bits (58), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL + + + AFR+FD DG+ + +L+ + L
Sbjct: 59 DGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL--GEK 116
Query: 136 LSDNDIQHLIQ 146
L+D ++ I+
Sbjct: 117 LTDEEVDQXIR 127
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 78 DGDCT--FEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTHH 135
DG+ T F +FL + + + AFR+FD DG+ + +L+ + L
Sbjct: 58 DGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNL--GEK 115
Query: 136 LSDNDIQHLIQ 146
L+D ++ I+
Sbjct: 116 LTDEEVDEXIR 126
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 26.6 bits (57), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 75 SSHDGDCTFEDFLDMMSVFSESAPKPVKAEHAFRIFDFDGDDMLGMTDLKQIIDRLTGTH 134
S+ G + DFL ++ ++ K F+ FD DG+ + + +LK+I R +
Sbjct: 104 SNASGQIHYTDFL-AATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIEN 162
Query: 135 HLSDNDIQHLIQNI 148
L D I L+Q +
Sbjct: 163 PLIDKAIDSLLQEV 176
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,454,673
Number of Sequences: 62578
Number of extensions: 204646
Number of successful extensions: 695
Number of sequences better than 100.0: 128
Number of HSP's better than 100.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 540
Number of HSP's gapped (non-prelim): 192
length of query: 189
length of database: 14,973,337
effective HSP length: 93
effective length of query: 96
effective length of database: 9,153,583
effective search space: 878743968
effective search space used: 878743968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)