Your job contains 1 sequence.
>psy17875
MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKH
DRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17875
(107 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1588543 - symbol:Brcc3 "BRCA1/BRCA2-containing comple... 211 2.5e-21 2
UNIPROTKB|B5X8M4 - symbol:brcc3 "Lys-63-specific deubiqui... 248 3.9e-21 1
UNIPROTKB|Q4VA72 - symbol:brcc3 "Lys-63-specific deubiqui... 242 1.7e-20 1
MGI|MGI:3647286 - symbol:Gm5136 "predicted gene 5136" spe... 197 9.3e-20 2
UNIPROTKB|Q66GV6 - symbol:brcc3 "Lys-63-specific deubiqui... 234 1.2e-19 1
UNIPROTKB|P46736 - symbol:BRCC3 "Lys-63-specific deubiqui... 212 2.5e-17 1
UNIPROTKB|F1RZ41 - symbol:BRCC36 "Uncharacterized protein... 212 2.5e-17 1
UNIPROTKB|B0KWU8 - symbol:BRCC3 "Lys-63-specific deubiqui... 212 2.5e-17 1
UNIPROTKB|Q5R9L6 - symbol:BRCC3 "Lys-63-specific deubiqui... 212 2.5e-17 1
MGI|MGI:2389572 - symbol:Brcc3 "BRCA1/BRCA2-containing co... 212 2.5e-17 1
UNIPROTKB|A5PJP6 - symbol:BRCC3 "Lys-63-specific deubiqui... 211 3.2e-17 1
UNIPROTKB|G5E595 - symbol:BRCC3 "Lys-63-specific deubiqui... 202 3.7e-16 1
TAIR|locus:2016279 - symbol:BRCC36A "AT1G80210" species:3... 194 8.8e-15 1
TAIR|locus:2083318 - symbol:BRCC36B "AT3G06820" species:3... 192 1.4e-14 1
UNIPROTKB|F1P4L2 - symbol:BRCC3 "Uncharacterized protein"... 138 2.0e-09 1
DICTYBASE|DDB_G0272566 - symbol:psmD14 "putative multidru... 108 1.3e-05 1
SGD|S000001900 - symbol:RPN11 "Metalloprotease subunit of... 104 3.5e-05 1
TAIR|locus:2017764 - symbol:CSN5A "COP9 signalosome 5A" s... 104 4.6e-05 1
DICTYBASE|DDB_G0284597 - symbol:csn5 "Mov34/MPN/PAD-1 fam... 103 5.2e-05 1
WB|WBGene00018135 - symbol:F37A4.5 species:6239 "Caenorha... 101 8.0e-05 1
TAIR|locus:2171696 - symbol:AT5G23540 "AT5G23540" species... 100 9.6e-05 1
GENEDB_PFALCIPARUM|MAL13P1.343 - symbol:MAL13P1.343 "prot... 98 0.00016 1
UNIPROTKB|Q8ID28 - symbol:MAL13P1.343 "Proteasome regulat... 98 0.00016 1
TAIR|locus:2032288 - symbol:CSN5B "COP9-signalosome 5B" s... 98 0.00021 1
UNIPROTKB|E5RHF2 - symbol:COPS5 "COP9 signalosome complex... 90 0.00021 1
UNIPROTKB|F1LMW6 - symbol:Psmd14 "Protein Psmd14" species... 95 0.00031 1
UNIPROTKB|E1C6N0 - symbol:PSMD14 "Uncharacterized protein... 95 0.00032 1
FB|FBgn0028694 - symbol:Rpn11 "Regulatory particle non-AT... 95 0.00034 1
UNIPROTKB|Q17QP9 - symbol:PSMD14 "Proteasome (Prosome, ma... 95 0.00034 1
UNIPROTKB|O00487 - symbol:PSMD14 "26S proteasome non-ATPa... 95 0.00034 1
UNIPROTKB|F1RPQ3 - symbol:PSMD14 "Uncharacterized protein... 95 0.00034 1
MGI|MGI:1913284 - symbol:Psmd14 "proteasome (prosome, mac... 95 0.00034 1
RGD|1594532 - symbol:Psmd14 "proteasome (prosome, macropa... 95 0.00034 1
ZFIN|ZDB-GENE-070410-56 - symbol:psmd14 "proteasome (pros... 95 0.00034 1
CGD|CAL0003932 - symbol:orf19.7264 species:5476 "Candida ... 95 0.00035 1
WB|WBGene00004467 - symbol:rpn-11 species:6239 "Caenorhab... 95 0.00035 1
UNIPROTKB|O76577 - symbol:rpn-11 "26S proteasome non-ATPa... 95 0.00035 1
FB|FBgn0027053 - symbol:CSN5 "COP9 complex homolog subuni... 93 0.00062 1
POMBASE|SPAC31G5.13 - symbol:rpn11 "19S proteasome regula... 92 0.00072 1
UNIPROTKB|F1MBP8 - symbol:COPS5 "Uncharacterized protein"... 92 0.00082 1
UNIPROTKB|E2QWE0 - symbol:COPS5 "Uncharacterized protein"... 92 0.00082 1
UNIPROTKB|Q92905 - symbol:COPS5 "COP9 signalosome complex... 92 0.00082 1
UNIPROTKB|F2Z540 - symbol:COPS5 "Uncharacterized protein"... 92 0.00082 1
MGI|MGI:1349415 - symbol:Cops5 "COP9 (constitutive photom... 92 0.00082 1
RGD|1310301 - symbol:Cops5 "COP9 signalosome subunit 5" s... 92 0.00082 1
UNIPROTKB|Q5ZLC3 - symbol:COPS5 "Uncharacterized protein"... 92 0.00084 1
>RGD|1588543 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10116 "Rattus norvegicus" [GO:0000151 "ubiquitin ligase
complex" evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase
complex" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO;ISS]
[GO:0010165 "response to X-ray" evidence=IEA;ISO] [GO:0010212
"response to ionizing radiation" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA;ISO] [GO:0031572 "G2 DNA
damage checkpoint" evidence=ISO;ISS] [GO:0031593 "polyubiquitin
binding" evidence=ISO;ISS] [GO:0045739 "positive regulation of DNA
repair" evidence=ISO;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050790 "regulation of catalytic activity"
evidence=ISO] [GO:0070531 "BRCA1-A complex" evidence=ISO;ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISO;ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISO;ISS] [GO:0070552 "BRISC complex" evidence=ISO;ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1588543
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 EMBL:CH474092 EMBL:BC166833
IPI:IPI00197234 RefSeq:NP_001120772.1 UniGene:Rn.52727
ProteinModelPortal:B2RYM5 PRIDE:B2RYM5 GeneID:316794
KEGG:rno:316794 NextBio:671241 Genevestigator:B2RYM5 Uniprot:B2RYM5
Length = 291
Score = 211 (79.3 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 40/74 (54%), Positives = 54/74 (72%)
Query: 36 TKEEK--GVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGW 93
T EK ++ VH+++++I R + DRVE SPEQL A TEAE+L++L R +RV+GW
Sbjct: 61 TVPEKVDSIRVVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW 120
Query: 94 FHSHPHITVWPSDV 107
+HSHPHITVWPS V
Sbjct: 121 YHSHPHITVWPSHV 134
Score = 53 (23.7 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 2 SLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEE 39
++ ++ D + ALS +K EV+ + IGE ++
Sbjct: 8 AVQAVHLESDAFLVCLNHALSTEKEEVMGLCIGELNDD 45
>UNIPROTKB|B5X8M4 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8030 "Salmo salar" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 GO:GO:0070537 MEROPS:M67.004 CTD:79184
EMBL:BT047393 RefSeq:NP_001134356.1 UniGene:Ssa.10060
ProteinModelPortal:B5X8M4 GeneID:100195855 Uniprot:B5X8M4
Length = 260
Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 47/107 (43%), Positives = 69/107 (64%)
Query: 1 MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKH 60
M++ ++ D + ALS +K EV+ + IGE + VH+++++I R +
Sbjct: 1 MAVSAVHLESDAFLVCMNHALSTEKEEVMGLCIGEVDTNR---IVHIHSVIILRRSDKRK 57
Query: 61 DRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
DRVE SPEQL A TEAE+L+++ R +RV+GW+HSHPHITVWPS V
Sbjct: 58 DRVEISPEQLSSAATEAERLAEMTGRPMRVVGWYHSHPHITVWPSHV 104
>UNIPROTKB|Q4VA72 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 EMBL:CR760965 EMBL:BC096514
RefSeq:NP_001016457.1 UniGene:Str.51157 ProteinModelPortal:Q4VA72
STRING:Q4VA72 GeneID:549211 KEGG:xtr:549211 Xenbase:XB-GENE-5812885
Uniprot:Q4VA72
Length = 261
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 46/107 (42%), Positives = 70/107 (65%)
Query: 1 MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKH 60
M++ +I D + +LS ++ EV+ + IGE +K VH+++++I R +
Sbjct: 1 MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQK---VVHIHSVIILRRSDKRK 57
Query: 61 DRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
DRVE SPEQL A TEA++L+++ R +RV+GW+HSHPHITVWPS V
Sbjct: 58 DRVEISPEQLSAATTEADRLAEITGRPMRVVGWYHSHPHITVWPSHV 104
>MGI|MGI:3647286 [details] [associations]
symbol:Gm5136 "predicted gene 5136" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:3647286 GO:GO:0046872 GO:GO:0006508 GO:GO:0008237
GO:GO:0010212 GO:GO:0006302 GO:GO:0031593 GO:GO:0045739
GO:GO:0031572 GO:GO:0004843 GO:GO:0004221 GO:GO:0070531
GO:GO:0070552 EMBL:BC120506 EMBL:BC120508 EMBL:AK134982
EMBL:BN000130 IPI:IPI00279112 RefSeq:NP_988991.1 UniGene:Mm.452758
ProteinModelPortal:Q7M757 MEROPS:M67.007 PRIDE:Q7M757 GeneID:368203
KEGG:mmu:368203 UCSC:uc007gzj.2 KO:K11864 NextBio:400944
Genevestigator:Q7M757 GO:GO:0070537 Uniprot:Q7M757
Length = 291
Score = 197 (74.4 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 36/71 (50%), Positives = 50/71 (70%)
Query: 37 KEEKGVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHS 96
K+ + + VH+++++I R DRVE SPEQL A EAE+L++ R +RV+GW+HS
Sbjct: 64 KKMEATRIVHIHSVIILRRSDKTKDRVEISPEQLSAASIEAERLAEQTGRPMRVVGWYHS 123
Query: 97 HPHITVWPSDV 107
HPHITVWPS V
Sbjct: 124 HPHITVWPSHV 134
Score = 52 (23.4 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 3 LDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKE 38
+ Y+ D + ALS +K EV+ + IG+ +
Sbjct: 9 VQAVYLESDAFLVCLNHALSTEKEEVMGLCIGQLND 44
>UNIPROTKB|Q66GV6 [details] [associations]
symbol:brcc3 "Lys-63-specific deubiquitinase BRCC36"
species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 EMBL:BC082208 RefSeq:NP_001087827.1 UniGene:Xl.13095
ProteinModelPortal:Q66GV6 GeneID:447688 KEGG:xla:447688
Xenbase:XB-GENE-5812935 Uniprot:Q66GV6
Length = 261
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 45/107 (42%), Positives = 68/107 (63%)
Query: 1 MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKH 60
M++ +I D + +LS ++ EV+ + IGE +K VH+++++I R +
Sbjct: 1 MAVQAVHIQGDAFLVCVTHSLSTEREEVMGLCIGEVDTQK---LVHIHSVIILRRSDKRK 57
Query: 61 DRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
DRVE SPEQL A EA++L+ + R +RV+GW+HSHPHITVWPS V
Sbjct: 58 DRVEISPEQLSAATIEADRLADITGRPMRVVGWYHSHPHITVWPSHV 104
>UNIPROTKB|P46736 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9606 "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0010212 "response
to ionizing radiation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IDA] [GO:0070552 "BRISC complex" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0031572 "G2 DNA
damage checkpoint" evidence=IMP] [GO:0070531 "BRCA1-A complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0070537
"histone H2A K63-linked deubiquitination" evidence=IMP;IDA]
[GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IMP]
[GO:0008237 "metallopeptidase activity" evidence=IMP] [GO:0045739
"positive regulation of DNA repair" evidence=IMP] [GO:0031593
"polyubiquitin binding" evidence=IDA] [GO:0000151 "ubiquitin ligase
complex" evidence=IDA] [GO:0010165 "response to X-ray"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IDA]
[GO:0050790 "regulation of catalytic activity" evidence=IDA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0030234
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0006302
GO:GO:0031593 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509 EMBL:X64643
EMBL:S68015 EMBL:AY438030 EMBL:AK298886 EMBL:AK299194 EMBL:AK313544
EMBL:BX293995 EMBL:BX470111 EMBL:BC002999 EMBL:BC006540
IPI:IPI00853631 IPI:IPI00871617 IPI:IPI00936224 IPI:IPI00939471
IPI:IPI01010909 PIR:I38167 RefSeq:NP_001018065.1
RefSeq:NP_001229569.1 RefSeq:NP_077308.1 UniGene:Hs.558537
ProteinModelPortal:P46736 DIP:DIP-48719N IntAct:P46736
MINT:MINT-1475401 STRING:P46736 PhosphoSite:P46736 DMDM:20532383
PaxDb:P46736 PRIDE:P46736 DNASU:79184 Ensembl:ENST00000330045
Ensembl:ENST00000340647 Ensembl:ENST00000369459
Ensembl:ENST00000369462 Ensembl:ENST00000399026
Ensembl:ENST00000411985 GeneID:79184 KEGG:hsa:79184 UCSC:uc004fna.3
UCSC:uc004fnb.3 UCSC:uc011mzy.2 GeneCards:GC0XP154299
HGNC:HGNC:24185 MIM:300617 neXtProt:NX_P46736 Orphanet:280679
PharmGKB:PA134922847 HOVERGEN:HBG002142 GenomeRNAi:79184
NextBio:68176 ArrayExpress:P46736 Bgee:P46736 CleanEx:HS_BRCC3
Genevestigator:P46736 GermOnline:ENSG00000185515 GO:GO:0000152
Uniprot:P46736
Length = 316
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 36 TKEEK--GVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGW 93
T EK V+ VH+++++I R + DRVE SPEQL A TEAE+L++L R +RV+GW
Sbjct: 61 TVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW 120
Query: 94 FHSHPHITVWPSDV 107
+HSHPHITVWPS V
Sbjct: 121 YHSHPHITVWPSHV 134
>UNIPROTKB|F1RZ41 [details] [associations]
symbol:BRCC36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070552 "BRISC complex" evidence=IEA] [GO:0070537
"histone H2A K63-linked deubiquitination" evidence=IEA] [GO:0070531
"BRCA1-A complex" evidence=IEA] [GO:0045739 "positive regulation of
DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0010165
"response to X-ray" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0030234 GO:GO:0008237 GO:GO:0006302 GO:GO:0010165
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 GO:GO:0000152
GeneTree:ENSGT00390000000360 EMBL:CU914693 EMBL:CU861979
RefSeq:NP_001229952.1 UniGene:Ssc.49952 Ensembl:ENSSSCT00000014006
GeneID:100516948 KEGG:ssc:100516948 CTD:100516948 OMA:IPIHVVP
Uniprot:F1RZ41
Length = 291
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 36 TKEEK--GVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGW 93
T EK V+ VH+++++I R + DRVE SPEQL A TEAE+L++L R +RV+GW
Sbjct: 61 TVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW 120
Query: 94 FHSHPHITVWPSDV 107
+HSHPHITVWPS V
Sbjct: 121 YHSHPHITVWPSHV 134
>UNIPROTKB|B0KWU8 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9483 "Callithrix jacchus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISS] [GO:0004843
"ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0010212 "response to ionizing radiation" evidence=ISS]
[GO:0031572 "G2 DNA damage checkpoint" evidence=ISS] [GO:0031593
"polyubiquitin binding" evidence=ISS] [GO:0045739 "positive
regulation of DNA repair" evidence=ISS] [GO:0070531 "BRCA1-A
complex" evidence=ISS] [GO:0070536 "protein K63-linked
deubiquitination" evidence=ISS] [GO:0070537 "histone H2A K63-linked
deubiquitination" evidence=ISS] [GO:0070552 "BRISC complex"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0046872 GO:GO:0006508 GO:GO:0008237 GO:GO:0010212
GO:GO:0006302 GO:GO:0031593 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 MEROPS:M67.004 EMBL:DP000587 Uniprot:B0KWU8
Length = 316
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 36 TKEEK--GVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGW 93
T EK V+ VH+++++I R + DRVE SPEQL A TEAE+L++L R +RV+GW
Sbjct: 61 TVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW 120
Query: 94 FHSHPHITVWPSDV 107
+HSHPHITVWPS V
Sbjct: 121 YHSHPHITVWPSHV 134
>UNIPROTKB|Q5R9L6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0010212 "response to
ionizing radiation" evidence=ISS] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISS] [GO:0031593 "polyubiquitin binding"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0070531 "BRCA1-A complex" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=ISS]
[GO:0070552 "BRISC complex" evidence=ISS] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0010212 GO:GO:0006302 GO:GO:0031593
GO:GO:0045739 GO:GO:0031572 GO:GO:0004843 GO:GO:0004221
GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537 MEROPS:M67.004
CTD:79184 HOGENOM:HOG000007866 EMBL:CR859371 RefSeq:NP_001125907.1
UniGene:Pab.3487 ProteinModelPortal:Q5R9L6 PRIDE:Q5R9L6
GeneID:100172840 KEGG:pon:100172840 Uniprot:Q5R9L6
Length = 247
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 36 TKEEK--GVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGW 93
T EK V+ VH+++++I R + DRVE SPEQL A TEAE+L++L R +RV+GW
Sbjct: 61 TVAEKVDAVRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW 120
Query: 94 FHSHPHITVWPSDV 107
+HSHPHITVWPS V
Sbjct: 121 YHSHPHITVWPSHV 134
>MGI|MGI:2389572 [details] [associations]
symbol:Brcc3 "BRCA1/BRCA2-containing complex, subunit 3"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=ISO] [GO:0010165 "response to X-ray"
evidence=ISO] [GO:0010212 "response to ionizing radiation"
evidence=ISO] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=ISO] [GO:0031572 "G2 DNA damage
checkpoint" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO] [GO:0045739 "positive regulation of DNA repair"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050790 "regulation of catalytic activity" evidence=ISO]
[GO:0070531 "BRCA1-A complex" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070537 "histone H2A
K63-linked deubiquitination" evidence=ISO] [GO:0070552 "BRISC
complex" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:2389572 GO:GO:0030234 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864
GO:GO:0070537 MEROPS:M67.004 CTD:79184 eggNOG:NOG322509
HOGENOM:HOG000007866 HOVERGEN:HBG002142 GO:GO:0000152 EMBL:S68022
EMBL:AK011876 EMBL:AK149844 EMBL:AL671860 EMBL:BC021313
EMBL:BC048179 IPI:IPI00137103 IPI:IPI00880818 RefSeq:NP_001159929.1
RefSeq:NP_001159931.1 RefSeq:NP_666068.1 UniGene:Mm.226957
ProteinModelPortal:P46737 SMR:P46737 STRING:P46737
PhosphoSite:P46737 PaxDb:P46737 PRIDE:P46737
Ensembl:ENSMUST00000033544 Ensembl:ENSMUST00000114074
Ensembl:ENSMUST00000118428 GeneID:210766 KEGG:mmu:210766
UCSC:uc009tpy.2 GeneTree:ENSGT00390000000360 InParanoid:Q3UDZ4
OrthoDB:EOG45490C NextBio:373053 Bgee:P46737 CleanEx:MM_BRCC3
Genevestigator:P46737 GermOnline:ENSMUSG00000031201 Uniprot:P46737
Length = 291
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/74 (54%), Positives = 55/74 (74%)
Query: 36 TKEEK--GVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGW 93
T +EK ++ VH+++++I R + DRVE SPEQL A TEAE+L++L R +RV+GW
Sbjct: 61 TVQEKMDTIRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGW 120
Query: 94 FHSHPHITVWPSDV 107
+HSHPHITVWPS V
Sbjct: 121 YHSHPHITVWPSHV 134
>UNIPROTKB|A5PJP6 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=ISS]
[GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
[GO:0031593 "polyubiquitin binding" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0070537 "histone H2A K63-linked deubiquitination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0010212 "response to ionizing radiation"
evidence=ISS] [GO:0045739 "positive regulation of DNA repair"
evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070531 "BRCA1-A complex"
evidence=ISS] [GO:0031572 "G2 DNA damage checkpoint" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0010212 GO:GO:0006302
GO:GO:0031593 GO:GO:0045739 GO:GO:0031572 GO:GO:0004843
GO:GO:0004221 GO:GO:0070531 GO:GO:0070552 KO:K11864 GO:GO:0070537
EMBL:BT021737 EMBL:BC142193 IPI:IPI00687250 IPI:IPI00854460
RefSeq:NP_001069258.1 UniGene:Bt.58955 ProteinModelPortal:A5PJP6
STRING:A5PJP6 MEROPS:M67.004 GeneID:519513 KEGG:bta:519513
CTD:79184 eggNOG:NOG322509 HOGENOM:HOG000007866 NextBio:20872891
Uniprot:A5PJP6
Length = 316
Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
Identities = 38/66 (57%), Positives = 51/66 (77%)
Query: 42 VKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHIT 101
V+ VH+++++I R + DRVE SPEQL A TEAE+L++L R +RV+GW+HSHPHIT
Sbjct: 69 VRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRPMRVVGWYHSHPHIT 128
Query: 102 VWPSDV 107
VWPS V
Sbjct: 129 VWPSHV 134
>UNIPROTKB|G5E595 [details] [associations]
symbol:BRCC3 "Lys-63-specific deubiquitinase BRCC36"
species:9913 "Bos taurus" [GO:0070552 "BRISC complex" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=IEA]
[GO:0070531 "BRCA1-A complex" evidence=IEA] [GO:0045739 "positive
regulation of DNA repair" evidence=IEA] [GO:0031593 "polyubiquitin
binding" evidence=IEA] [GO:0031572 "G2 DNA damage checkpoint"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
"ubiquitin thiolesterase activity" evidence=IEA] [GO:0000152
"nuclear ubiquitin ligase complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0030234 GO:GO:0008237
GO:GO:0006302 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 GO:GO:0000152 GeneTree:ENSGT00390000000360
OMA:IPIHVVP EMBL:DAAA02070025 EMBL:DAAA02070022 EMBL:DAAA02070023
EMBL:DAAA02070024 Ensembl:ENSBTAT00000010280 Uniprot:G5E595
Length = 316
Score = 202 (76.2 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 42 VKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHIT 101
V+ VH+++++I R + DRVE SPEQL A TE +L++L R +RV+GW+HSHPHIT
Sbjct: 69 VRIVHIHSVIILRRSDKRKDRVEISPEQLSAASTETHRLAELTGRPMRVVGWYHSHPHIT 128
Query: 102 VWPSDV 107
VWPS V
Sbjct: 129 VWPSHV 134
>TAIR|locus:2016279 [details] [associations]
symbol:BRCC36A "AT1G80210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair" evidence=IMP]
[GO:0006310 "DNA recombination" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0006281 GO:GO:0006310 KO:K11864
eggNOG:NOG322509 UniGene:At.33958 UniGene:At.50812 MEROPS:M67.A03
EMBL:AY093768 EMBL:BT002265 IPI:IPI00536421 RefSeq:NP_178138.2
ProteinModelPortal:Q8RW94 SMR:Q8RW94 PRIDE:Q8RW94
EnsemblPlants:AT1G80210.1 GeneID:844361 KEGG:ath:AT1G80210
TAIR:At1g80210 HOGENOM:HOG000005846 InParanoid:Q8RW94 OMA:QEAMHRS
PhylomeDB:Q8RW94 ProtClustDB:CLSN2680823 Genevestigator:Q8RW94
Uniprot:Q8RW94
Length = 406
Score = 194 (73.4 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 43/109 (39%), Positives = 64/109 (58%)
Query: 1 MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEK--GVKSVHVYTMVIPLRLTS 58
MSL +SEDV+ + ALS + E++ +L+G+ + K G + ++ R
Sbjct: 1 MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKDGGSATAMIWGASPQSRSDR 60
Query: 59 KHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ DRVE +PEQL A +A++++ R RVIGW+HSHPHITV PS V
Sbjct: 61 QKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHV 109
>TAIR|locus:2083318 [details] [associations]
symbol:BRCC36B "AT3G06820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002686 GO:GO:0006281 KO:K11864
IPI:IPI00538324 RefSeq:NP_001078118.1 UniGene:At.40457
ProteinModelPortal:F4JC55 SMR:F4JC55 MEROPS:M67.A03 PRIDE:F4JC55
EnsemblPlants:AT3G06820.2 GeneID:819866 KEGG:ath:AT3G06820
Uniprot:F4JC55
Length = 405
Score = 192 (72.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 44/109 (40%), Positives = 64/109 (58%)
Query: 1 MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEK-GVKSVHVYTMVIPL-RLTS 58
MSL +SEDV+ + ALS + E++ +L+G+ + K G + + P R
Sbjct: 1 MSLTCVNMSEDVWLTCLTHALSTETEEIMGLLLGDIEYSKNGESATAMIWGASPQPRSDR 60
Query: 59 KHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ DRVE +PEQL A +A++++ R RVIGW+HSHPHITV PS V
Sbjct: 61 QKDRVETNPEQLAAASAQADRMTISTGRTTRVIGWYHSHPHITVLPSHV 109
>UNIPROTKB|F1P4L2 [details] [associations]
symbol:BRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000152 "nuclear ubiquitin ligase complex"
evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0031572 "G2 DNA damage
checkpoint" evidence=IEA] [GO:0031593 "polyubiquitin binding"
evidence=IEA] [GO:0045739 "positive regulation of DNA repair"
evidence=IEA] [GO:0070531 "BRCA1-A complex" evidence=IEA]
[GO:0070537 "histone H2A K63-linked deubiquitination" evidence=IEA]
[GO:0070552 "BRISC complex" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0030234 GO:GO:0008237
GO:GO:0006302 GO:GO:0010165 GO:GO:0045739 GO:GO:0031572
GO:GO:0004843 GO:GO:0004221 GO:GO:0070531 GO:GO:0070552
GO:GO:0070537 GO:GO:0000152 GeneTree:ENSGT00390000000360
OMA:IPIHVVP EMBL:AADN02013225 IPI:IPI00823271
Ensembl:ENSGALT00000040298 ArrayExpress:F1P4L2 Uniprot:F1P4L2
Length = 226
Score = 138 (53.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 66 SPEQLFEAVTEAE------KLSKLYNRELRVIGWFHSHPHITVWPSDV 107
SPEQL A TEA +L+++ R +RV+GW+HSHPHITVWPS V
Sbjct: 1 SPEQLSAASTEAHLSLLTHRLAEMTGRPMRVVGWYHSHPHITVWPSHV 48
>DICTYBASE|DDB_G0272566 [details] [associations]
symbol:psmD14 "putative multidrug resistance protein"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0272566 GO:GO:0045335
GO:GO:0046872 GenomeReviews:CM000151_GR GO:GO:0008237 GO:GO:0004175
EMBL:AAFI02000008 GO:GO:0000502 GO:GO:0006511 eggNOG:COG1310
MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012 KO:K03030
OMA:MVLGQEP EMBL:U96916 RefSeq:XP_644863.1
ProteinModelPortal:Q86IJ1 STRING:Q86IJ1 EnsemblProtists:DDB0191298
GeneID:8618542 KEGG:ddi:DDB_G0272566 ProtClustDB:CLSZ2438686
Uniprot:Q86IJ1
Length = 306
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/104 (31%), Positives = 52/104 (50%)
Query: 4 DVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRV 63
+ +IS M A + LEV+ +++GE +E ++ + V+ M P TS V
Sbjct: 29 ETIHISSLALLKMLQHARAGVPLEVMGLMLGELIDEYTIRVIDVFAM--PQSGTSVS--V 84
Query: 64 EASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
EA + +F+ T+ + K R+ VIGW+HSHP W S V
Sbjct: 85 EAI-DPVFQ--TKMLDMLKQTGRDEIVIGWYHSHPGFGCWLSSV 125
>SGD|S000001900 [details] [associations]
symbol:RPN11 "Metalloprotease subunit of the 19S regulatory
particle of the 26S pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016559 "peroxisome fission" evidence=IMP] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0004843
"ubiquitin-specific protease activity" evidence=IMP] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0016579 "protein
deubiquitination" evidence=IGI;IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0000266
"mitochondrial fission" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 SGD:S000001900 GO:GO:0005739
GO:GO:0005634 GO:GO:0043161 EMBL:D50617 EMBL:BK006940 GO:GO:0008237
GO:GO:0016559 GO:GO:0008541 eggNOG:COG1310 MEROPS:M67.001
GO:GO:0004843 GO:GO:0016579 GO:GO:0000266 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 GO:GO:0034515 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
OrthoDB:EOG40CMRT EMBL:X79561 EMBL:AY152546 EMBL:AY692755
PIR:S56259 RefSeq:NP_116659.1 ProteinModelPortal:P43588 SMR:P43588
DIP:DIP-1573N IntAct:P43588 MINT:MINT-405184 STRING:P43588
PaxDb:P43588 PeptideAtlas:P43588 PRIDE:P43588 EnsemblFungi:YFR004W
GeneID:850554 KEGG:sce:YFR004W CYGD:YFR004w NextBio:966339
Genevestigator:P43588 GermOnline:YFR004W Uniprot:P43588
Length = 306
Score = 104 (41.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 31/104 (29%), Positives = 49/104 (47%)
Query: 4 DVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRV 63
+ YIS M + +EV+ +++GE ++ V V V+ M P T V
Sbjct: 25 ETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAM--PQSGTGVS--V 80
Query: 64 EASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
EA + +F+A + + K R+ V+GW+HSHP W S V
Sbjct: 81 EAV-DDVFQA--KMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSV 121
>TAIR|locus:2017764 [details] [associations]
symbol:CSN5A "COP9 signalosome 5A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000338 "protein deneddylation"
evidence=TAS] [GO:0010093 "specification of floral organ identity"
evidence=IMP] [GO:0009733 "response to auxin stimulus"
evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0010387 "signalosome
assembly" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA;IMP] [GO:0010971 "positive regulation of G2/M
transition of mitotic cell cycle" evidence=IMP] [GO:0031347
"regulation of defense response" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0010093
GO:GO:0008180 eggNOG:COG1310 GO:GO:0031347 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 ProtClustDB:CLSN2681857
GO:GO:0010100 GO:GO:0010387 EMBL:AF087413 EMBL:AF395062
EMBL:AF042334 EMBL:AF000657 EMBL:AY087510 EMBL:BT003909
IPI:IPI00517251 PIR:C86363 PIR:T52180 RefSeq:NP_173705.1
UniGene:At.10441 ProteinModelPortal:Q8LAZ7 IntAct:Q8LAZ7
STRING:Q8LAZ7 MEROPS:M67.A01 PaxDb:Q8LAZ7 PRIDE:Q8LAZ7
EnsemblPlants:AT1G22920.1 GeneID:838899 KEGG:ath:AT1G22920
GeneFarm:4559 TAIR:At1g22920 InParanoid:Q8LAZ7 OMA:IFHYDDA
PhylomeDB:Q8LAZ7 Genevestigator:Q8LAZ7 Uniprot:Q8LAZ7
Length = 357
Score = 104 (41.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
+IS M A S +E++ ++ G+T+ G + + +P+ T RV A
Sbjct: 60 HISALALLKMVVHARSGGTIEIMGLMQGKTE---GDTIIVMDAFALPVEGTET--RVNAQ 114
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +E + E + SKL R V+GW+HSHP W S +
Sbjct: 115 SDA-YEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGI 154
>DICTYBASE|DDB_G0284597 [details] [associations]
symbol:csn5 "Mov34/MPN/PAD-1 family protein"
species:44689 "Dictyostelium discoideum" [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0008180 "signalosome"
evidence=IEA;ISS;IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 dictyBase:DDB_G0284597 GO:GO:0005737
GenomeReviews:CM000153_GR GO:GO:0046872 GO:GO:0008283 GO:GO:0006508
GO:GO:0008237 GO:GO:0008180 eggNOG:COG1310 EMBL:AAFI02000069
KO:K09613 OMA:SAGKVCL EMBL:DQ309433 RefSeq:XP_638491.1
ProteinModelPortal:Q54PF3 STRING:Q54PF3 MEROPS:M67.A13 PRIDE:Q54PF3
EnsemblProtists:DDB0233103 GeneID:8624671 KEGG:ddi:DDB_G0284597
ProtClustDB:CLSZ2497175 Uniprot:Q54PF3
Length = 332
Score = 103 (41.3 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 33/100 (33%), Positives = 46/100 (46%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S KLEV+ ML+G K E + + + +P+ T RV A
Sbjct: 56 ISAIALLKMVMHARSGGKLEVMGMLMG--KVENNTMII-MDSFALPVEGTET--RVNAQV 110
Query: 68 EQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
E +E + E +L K R +GW+HSHP W S +
Sbjct: 111 EA-YEYMVEYLELIKQTGRLENALGWYHSHPGYGCWLSGI 149
>WB|WBGene00018135 [details] [associations]
symbol:F37A4.5 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000003 eggNOG:COG1310
EMBL:FO081312 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
PIR:S44642 RefSeq:NP_498470.1 UniGene:Cel.10529
ProteinModelPortal:P41883 SMR:P41883 IntAct:P41883 STRING:P41883
MEROPS:M67.A10 PaxDb:P41883 PRIDE:P41883 EnsemblMetazoa:F37A4.5.1
EnsemblMetazoa:F37A4.5.2 GeneID:185404 KEGG:cel:CELE_F37A4.5
UCSC:F37A4.5 CTD:185404 WormBase:F37A4.5 InParanoid:P41883
OMA:KMLRHAR NextBio:928158 Uniprot:P41883
Length = 319
Score = 101 (40.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 32/100 (32%), Positives = 48/100 (48%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ ++ + V+ M P TS VE S
Sbjct: 31 ISSLALLKMLRHARSGIPLEVMGLMLGDFVDDYTINVTDVFAM--PQSGTSV--TVE-SV 85
Query: 68 EQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +++ T+ L KL R V+GW+HSHP W S V
Sbjct: 86 DPVYQ--TKHMDLLKLVGRTENVVGWYHSHPGFGCWLSSV 123
>TAIR|locus:2171696 [details] [associations]
symbol:AT5G23540 "AT5G23540" species:3702 "Arabidopsis
thaliana" [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0030163 "protein catabolic process" evidence=TAS]
[GO:0009651 "response to salt stress" evidence=IEP;RCA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006096 "glycolysis" evidence=RCA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007030 "Golgi organization" evidence=RCA] [GO:0009266
"response to temperature stimulus" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009640 "photomorphogenesis"
evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0005829 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0006508 GO:GO:0008237 GO:GO:0030163 GO:GO:0000502
eggNOG:COG1310 MEROPS:M67.001 EMBL:AB025633 InterPro:IPR024969
Pfam:PF13012 EMBL:AY230843 EMBL:AY230844 EMBL:AY230845
EMBL:AY070073 EMBL:AY091329 EMBL:AY086277 IPI:IPI00538427
RefSeq:NP_197745.1 UniGene:At.22926 ProteinModelPortal:Q9LT08
SMR:Q9LT08 IntAct:Q9LT08 STRING:Q9LT08 PaxDb:Q9LT08 PRIDE:Q9LT08
DNASU:832420 EnsemblPlants:AT5G23540.1 GeneID:832420
KEGG:ath:AT5G23540 TAIR:At5g23540 HOGENOM:HOG000183690
InParanoid:Q9LT08 KO:K03030 OMA:MVLGQEP PhylomeDB:Q9LT08
ProtClustDB:CLSN2686290 Genevestigator:Q9LT08 GermOnline:AT5G23540
Uniprot:Q9LT08
Length = 308
Score = 100 (40.3 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE +E V+ V V+ M P T VEA
Sbjct: 31 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAM--PQSGTGVS--VEAV 86
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+ T + K R V+GW+HSHP W S V
Sbjct: 87 -DHVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 124
>GENEDB_PFALCIPARUM|MAL13P1.343 [details] [associations]
symbol:MAL13P1.343 "proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 98 (39.6 bits), Expect = 0.00016, P = 0.00016
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 5 VAYISEDVYFSMFYLA--LSNDK----LEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTS 58
+A SE VY S L L + + +EV+ +++GE +E ++ V V+ M P S
Sbjct: 26 LADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAM--PQSGNS 83
Query: 59 KHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPS 105
VEA + +++ E+L K E+ V+GW+HSHP W S
Sbjct: 84 VS--VEAV-DPVYQT-NMLEELKKTGRHEM-VVGWYHSHPGFGCWLS 125
>UNIPROTKB|Q8ID28 [details] [associations]
symbol:MAL13P1.343 "Proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0006511
MEROPS:M67.001 EMBL:AL844509 InterPro:IPR024969 Pfam:PF13012
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
ProtClustDB:CLSZ2438686 RefSeq:XP_001350391.1
ProteinModelPortal:Q8ID28 IntAct:Q8ID28 MINT:MINT-1606262
EnsemblProtists:MAL13P1.343:mRNA GeneID:813911 KEGG:pfa:MAL13P1.343
EuPathDB:PlasmoDB:PF3D7_1368100 Uniprot:Q8ID28
Length = 311
Score = 98 (39.6 bits), Expect = 0.00016, P = 0.00016
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 5 VAYISEDVYFSMFYLA--LSNDK----LEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTS 58
+A SE VY S L L + + +EV+ +++GE +E ++ V V+ M P S
Sbjct: 26 LADTSEQVYISPLALLKILKHGRAGVPMEVMGLMLGEIVDEYTIRIVDVFAM--PQSGNS 83
Query: 59 KHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPS 105
VEA + +++ E+L K E+ V+GW+HSHP W S
Sbjct: 84 VS--VEAV-DPVYQT-NMLEELKKTGRHEM-VVGWYHSHPGFGCWLS 125
>TAIR|locus:2032288 [details] [associations]
symbol:CSN5B "COP9-signalosome 5B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008180 "signalosome" evidence=TAS;IPI] [GO:0009640
"photomorphogenesis" evidence=RCA;TAS] [GO:0000338 "protein
deneddylation" evidence=IGI] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0010100 "negative regulation of
photomorphogenesis" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010387 "signalosome assembly" evidence=IMP]
[GO:0010971 "positive regulation of G2/M transition of mitotic cell
cycle" evidence=IMP] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IMP] [GO:2000082 "regulation of L-ascorbic acid
biosynthetic process" evidence=IMP] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0007275 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005737 GO:GO:0009733 GO:GO:0046872 GO:GO:0006508
GO:GO:0000085 GO:GO:0008237 GO:GO:0009585 GO:GO:0008180
eggNOG:COG1310 GO:GO:0000338 EMBL:AF087412 EMBL:AF395061
EMBL:AC016162 EMBL:AF411778 EMBL:AY124816 IPI:IPI00526805
PIR:H96736 PIR:T52042 RefSeq:NP_177279.1 UniGene:At.17922
UniGene:At.68950 ProteinModelPortal:Q9FVU9 IntAct:Q9FVU9
STRING:Q9FVU9 MEROPS:M67.A02 PRIDE:Q9FVU9 EnsemblPlants:AT1G71230.1
GeneID:843463 KEGG:ath:AT1G71230 TAIR:At1g71230
HOGENOM:HOG000116528 InParanoid:Q9FVU9 KO:K09613 OMA:SAGKVCL
PhylomeDB:Q9FVU9 ProtClustDB:CLSN2681857 Genevestigator:Q9FVU9
GermOnline:AT1G71230 GO:GO:0010100 GO:GO:0010387 Uniprot:Q9FVU9
Length = 358
Score = 98 (39.6 bits), Expect = 0.00021, P = 0.00021
Identities = 28/100 (28%), Positives = 46/100 (46%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S +E++ ++ G+T G + + +P+ T RV A
Sbjct: 61 ISALALLKMVVHARSGGTIEIMGLMQGKTD---GDTIIVMDAFALPVEGTET--RVNAQ- 114
Query: 68 EQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +E + E + +KL R V+GW+HSHP W S +
Sbjct: 115 DDAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGI 154
>UNIPROTKB|E5RHF2 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
[GO:0051726 "regulation of cell cycle" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0051726
GO:GO:0008180 ChiTaRS:COPS5 HGNC:HGNC:2240 EMBL:AC109335
EMBL:AC110998 IPI:IPI00985306 ProteinModelPortal:E5RHF2 SMR:E5RHF2
Ensembl:ENST00000518747 ArrayExpress:E5RHF2 Bgee:E5RHF2
Uniprot:E5RHF2
Length = 151
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 24/89 (26%), Positives = 43/89 (48%)
Query: 20 ALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTE-AE 78
A S LEV+ +++G+ G + + + +P+ T +A+ + A E A+
Sbjct: 5 ARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAAYEYMAAYIENAK 61
Query: 79 KLSKLYNRELRVIGWFHSHPHITVWPSDV 107
++ +L N IGW+HSHP W S +
Sbjct: 62 QVGRLEN----AIGWYHSHPGYGCWLSGI 86
>UNIPROTKB|F1LMW6 [details] [associations]
symbol:Psmd14 "Protein Psmd14" species:10116 "Rattus
norvegicus" [GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IEA] [GO:0070628 "proteasome binding" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 IPI:IPI00372125
Ensembl:ENSRNOT00000006605 ArrayExpress:F1LMW6 Uniprot:F1LMW6
Length = 294
Score = 95 (38.5 bits), Expect = 0.00031, P = 0.00031
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 16 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 71
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 72 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 109
>UNIPROTKB|E1C6N0 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0061133 "endopeptidase activator activity"
evidence=IEA] [GO:0061136 "regulation of proteasomal protein
catabolic process" evidence=IEA] [GO:0070628 "proteasome binding"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0061133 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:AADN02058674
IPI:IPI00604055 Ensembl:ENSGALT00000018142 ArrayExpress:E1C6N0
Uniprot:E1C6N0
Length = 300
Score = 95 (38.5 bits), Expect = 0.00032, P = 0.00032
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 22 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 77
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 78 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 115
>FB|FBgn0028694 [details] [associations]
symbol:Rpn11 "Regulatory particle non-ATPase 11" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IMP;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0032436 "positive regulation of proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0005875 "microtubule
associated complex" evidence=IDA] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0005875 EMBL:AE014134 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0004175 GO:GO:0008541
GO:GO:0032436 GO:GO:0009987 eggNOG:COG1310 MEROPS:M67.001
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
KO:K03030 OMA:MVLGQEP EMBL:AF145313 EMBL:AY070977 EMBL:AF195189
RefSeq:NP_608905.1 UniGene:Dm.3343 ProteinModelPortal:Q9V3H2
SMR:Q9V3H2 IntAct:Q9V3H2 MINT:MINT-819727 STRING:Q9V3H2
PaxDb:Q9V3H2 PRIDE:Q9V3H2 EnsemblMetazoa:FBtr0079027 GeneID:33738
KEGG:dme:Dmel_CG18174 CTD:33738 FlyBase:FBgn0028694
InParanoid:Q9V3H2 OrthoDB:EOG4SQVC9 PhylomeDB:Q9V3H2
GenomeRNAi:33738 NextBio:785010 Bgee:Q9V3H2 GermOnline:CG18174
Uniprot:Q9V3H2
Length = 308
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 30 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVQVIDVFAM--PQ--TGTGVSVEAV 85
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 86 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 123
>UNIPROTKB|Q17QP9 [details] [associations]
symbol:PSMD14 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 14" species:9913 "Bos taurus" [GO:0004221 "ubiquitin
thiolesterase activity" evidence=IDA] [GO:0070628 "proteasome
binding" evidence=IDA] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=IEA] [GO:0061133 "endopeptidase
activator activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=IEA] [GO:0006303
"double-strand break repair via nonhomologous end joining"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0000502 GO:GO:0061133
GO:GO:0070628 eggNOG:COG1310 MEROPS:M67.001 GO:GO:0004221
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690 KO:K03030
OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742 OrthoDB:EOG4R23V7
EMBL:DAAA02004429 EMBL:DAAA02004430 EMBL:BC118241 IPI:IPI00689118
RefSeq:NP_001069535.1 UniGene:Bt.31257 SMR:Q17QP9 STRING:Q17QP9
Ensembl:ENSBTAT00000046166 GeneID:535683 KEGG:bta:535683
InParanoid:Q17QP9 NextBio:20876811 Uniprot:Q17QP9
Length = 310
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 32 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 87
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 88 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>UNIPROTKB|O00487 [details] [associations]
symbol:PSMD14 "26S proteasome non-ATPase regulatory subunit
14" species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP;TAS]
[GO:0008237 "metallopeptidase activity" evidence=TAS] [GO:0070536
"protein K63-linked deubiquitination" evidence=IMP;TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0061133 "endopeptidase activator activity" evidence=IMP]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=IMP] [GO:0070628 "proteasome binding" evidence=IDA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0010950 "positive regulation of endopeptidase
activity" evidence=IMP] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0005829 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0044281
GO:GO:0046872 GO:GO:0000082 GO:GO:0008237 EMBL:CH471058
GO:GO:0051436 GO:GO:0000724 GO:GO:0061133 GO:GO:0070628
GO:GO:0008541 GO:GO:0000216 GO:GO:0000209 eggNOG:COG1310
GO:GO:0070536 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
GO:GO:0006303 MEROPS:M67.001 GO:GO:0004221 GO:GO:0006521
GO:GO:0061136 Reactome:REACT_383 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP EMBL:U86782
EMBL:AK055128 EMBL:BC066336 IPI:IPI00024821 RefSeq:NP_005796.1
UniGene:Hs.740477 ProteinModelPortal:O00487 SMR:O00487
IntAct:O00487 STRING:O00487 PhosphoSite:O00487 OGP:O00487
REPRODUCTION-2DPAGE:IPI00024821 PaxDb:O00487 PeptideAtlas:O00487
PRIDE:O00487 Ensembl:ENST00000409682 GeneID:10213 KEGG:hsa:10213
UCSC:uc002ubu.2 CTD:10213 GeneCards:GC02P162164 HGNC:HGNC:16889
HPA:HPA002114 MIM:607173 neXtProt:NX_O00487 PharmGKB:PA134957776
HOVERGEN:HBG053742 InParanoid:O00487 OrthoDB:EOG4R23V7
BindingDB:O00487 ChEMBL:CHEMBL2007629 GenomeRNAi:10213
NextBio:38668 ArrayExpress:O00487 Bgee:O00487 CleanEx:HS_PSMD14
Genevestigator:O00487 GermOnline:ENSG00000115233 Uniprot:O00487
Length = 310
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 32 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 87
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 88 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>UNIPROTKB|F1RPQ3 [details] [associations]
symbol:PSMD14 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070628 "proteasome binding" evidence=IEA] [GO:0061136
"regulation of proteasomal protein catabolic process" evidence=IEA]
[GO:0061133 "endopeptidase activator activity" evidence=IEA]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0061133
GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CU571357
Ensembl:ENSSSCT00000017304 Uniprot:F1RPQ3
Length = 310
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 32 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 87
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 88 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>MGI|MGI:1913284 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10090 "Mus musculus" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=ISO] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
thiolesterase activity" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008152 "metabolic process" evidence=ISS]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0061133 "endopeptidase activator
activity" evidence=ISO] [GO:0061136 "regulation of proteasomal
protein catabolic process" evidence=ISO] [GO:0070536 "protein
K63-linked deubiquitination" evidence=ISO] [GO:0070628 "proteasome
binding" evidence=ISO] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 MGI:MGI:1913284 GO:GO:0046872 GO:GO:0006508
GO:GO:0008237 GO:GO:0004175 GO:GO:0000724 GO:GO:0061133
GO:GO:0008541 eggNOG:COG1310 GO:GO:0070536 GO:GO:0006303
MEROPS:M67.001 GO:GO:0004221 GO:GO:0061136 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 EMBL:Y13071 EMBL:AK012013 EMBL:AK151104
EMBL:AK151733 EMBL:BC003742 IPI:IPI00113262 RefSeq:NP_067501.2
UniGene:Mm.218198 ProteinModelPortal:O35593 SMR:O35593
IntAct:O35593 MINT:MINT-4049993 STRING:O35593 PhosphoSite:O35593
REPRODUCTION-2DPAGE:O35593 PaxDb:O35593 PRIDE:O35593
Ensembl:ENSMUST00000028278 GeneID:59029 KEGG:mmu:59029
InParanoid:O35593 BindingDB:O35593 ChiTaRS:PSMD14 NextBio:314614
Bgee:O35593 Genevestigator:O35593 GermOnline:ENSMUSG00000026914
Uniprot:O35593
Length = 310
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 32 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 87
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 88 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>RGD|1594532 [details] [associations]
symbol:Psmd14 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 14" species:10116 "Rattus norvegicus" [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
evidence=ISO] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=ISO] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISO] [GO:0010950
"positive regulation of endopeptidase activity" evidence=ISO]
[GO:0022624 "proteasome accessory complex" evidence=ISO]
[GO:0061133 "endopeptidase activator activity" evidence=ISO]
[GO:0061136 "regulation of proteasomal protein catabolic process"
evidence=ISO] [GO:0070536 "protein K63-linked deubiquitination"
evidence=ISO] [GO:0070628 "proteasome binding" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1594532
GO:GO:0000502 GO:GO:0061133 eggNOG:COG1310 MEROPS:M67.001
EMBL:CH473949 GO:GO:0061136 InterPro:IPR024969 Pfam:PF13012
HOGENOM:HOG000183690 KO:K03030 CTD:10213 HOVERGEN:HBG053742
OrthoDB:EOG4R23V7 IPI:IPI00372125 EMBL:BC097427 EMBL:BC158645
RefSeq:NP_001020860.1 UniGene:Rn.161794 SMR:Q4V8E2 IntAct:Q4V8E2
STRING:Q4V8E2 GeneID:311078 KEGG:rno:311078 UCSC:RGD:1594532
InParanoid:Q4V8E2 NextBio:662956 Genevestigator:Q4V8E2
Uniprot:Q4V8E2
Length = 310
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 32 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 87
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 88 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>ZFIN|ZDB-GENE-070410-56 [details] [associations]
symbol:psmd14 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 14" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 ZFIN:ZDB-GENE-070410-56 InterPro:IPR024969
Pfam:PF13012 GeneTree:ENSGT00550000074674 OMA:MVLGQEP EMBL:CR450841
IPI:IPI00800873 PRIDE:F1QHE5 Ensembl:ENSDART00000091901 Bgee:F1QHE5
Uniprot:F1QHE5
Length = 310
Score = 95 (38.5 bits), Expect = 0.00034, P = 0.00034
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 7 YISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEAS 66
YIS M + +EV+ +++GE ++ V+ + V+ M P T VEA
Sbjct: 32 YISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAM--PQSGTGVS--VEAV 87
Query: 67 PEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ +F+A + + K R V+GW+HSHP W S V
Sbjct: 88 -DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 125
>CGD|CAL0003932 [details] [associations]
symbol:orf19.7264 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034399 "nuclear periphery" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0034515 "proteasome storage
granule" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0016579 "protein
deubiquitination" evidence=IEA] [GO:0000266 "mitochondrial fission"
evidence=IEA] [GO:0016559 "peroxisome fission" evidence=IEA]
[GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 CGD:CAL0003932
eggNOG:COG1310 MEROPS:M67.001 InterPro:IPR024969 Pfam:PF13012
EMBL:AACQ01000092 HOGENOM:HOG000183690 KO:K03030 RefSeq:XP_715061.1
ProteinModelPortal:Q59ZS7 STRING:Q59ZS7 GeneID:3643326
KEGG:cal:CaO19.7264 Uniprot:Q59ZS7
Length = 312
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 27/104 (25%), Positives = 50/104 (48%)
Query: 4 DVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRV 63
+ YIS M + +EV+ +++GE ++ ++HV+ V + + V
Sbjct: 31 ETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDF---TIHVHD-VFAMPQSGTGVSV 86
Query: 64 EASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
EA + +F+ T+ + + R+ V+GW+HSHP W S V
Sbjct: 87 EAV-DDVFQ--TKMMDMLRQTGRDQMVVGWYHSHPGFGCWLSSV 127
>WB|WBGene00004467 [details] [associations]
symbol:rpn-11 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 GO:GO:0008340
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0006508 GO:GO:0040011 GO:GO:0008237 eggNOG:COG1310
InterPro:IPR024969 Pfam:PF13012 GeneTree:ENSGT00550000074674
GO:GO:0005838 HOGENOM:HOG000183690 KO:K03030 OMA:MVLGQEP
EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 30/104 (28%), Positives = 48/104 (46%)
Query: 4 DVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRV 63
+ YIS M + +EV+ +++GE ++ V + V+ M P T V
Sbjct: 31 ETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAM--PQSGTGVS--V 86
Query: 64 EASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
EA + +F+A + + K R V+GW+HSHP W S V
Sbjct: 87 EAV-DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 127
>UNIPROTKB|O76577 [details] [associations]
symbol:rpn-11 "26S proteasome non-ATPase regulatory subunit
14" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000555 Pfam:PF01398
SMART:SM00232 GO:GO:0008340 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0046872 GO:GO:0006508 GO:GO:0040011
GO:GO:0008237 eggNOG:COG1310 InterPro:IPR024969 Pfam:PF13012
GeneTree:ENSGT00550000074674 GO:GO:0005838 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:FO081599 PIR:T33344 RefSeq:NP_494712.1
ProteinModelPortal:O76577 SMR:O76577 IntAct:O76577 MINT:MINT-211040
STRING:O76577 MEROPS:M67.A11 PaxDb:O76577 PRIDE:O76577
EnsemblMetazoa:K07D4.3.1 EnsemblMetazoa:K07D4.3.2 GeneID:173744
KEGG:cel:CELE_K07D4.3 UCSC:K07D4.3.1 CTD:173744 WormBase:K07D4.3
InParanoid:O76577 NextBio:880901 Uniprot:O76577
Length = 312
Score = 95 (38.5 bits), Expect = 0.00035, P = 0.00035
Identities = 30/104 (28%), Positives = 48/104 (46%)
Query: 4 DVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRV 63
+ YIS M + +EV+ +++GE ++ V + V+ M P T V
Sbjct: 31 ETVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVIDVFAM--PQSGTGVS--V 86
Query: 64 EASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
EA + +F+A + + K R V+GW+HSHP W S V
Sbjct: 87 EAV-DPVFQA--KMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGV 127
>FB|FBgn0027053 [details] [associations]
symbol:CSN5 "COP9 complex homolog subunit 5" species:7227
"Drosophila melanogaster" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008180 "signalosome"
evidence=ISS;NAS;IMP;IDA;TAS] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0001751
"compound eye photoreceptor cell differentiation" evidence=IMP;TAS]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007310 "oocyte
dorsal/ventral axis specification" evidence=IMP] [GO:0007314
"oocyte anterior/posterior axis specification" evidence=IMP]
[GO:0000338 "protein deneddylation" evidence=IMP] [GO:0019781
"NEDD8 activating enzyme activity" evidence=IMP] [GO:0048477
"oogenesis" evidence=TAS] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
evidence=IMP] [GO:0032435 "negative regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0007095 "mitotic G2 DNA damage checkpoint" evidence=IGI]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 EMBL:AE014297
GO:GO:0005737 GO:GO:0007095 GO:GO:0050821 GO:GO:0046872
GO:GO:0006508 GO:GO:0008237 GO:GO:0007409 GO:GO:0008180
eggNOG:COG1310 GO:GO:0001751 GO:GO:0008347 GO:GO:0045787
GO:GO:0032435 GO:GO:0007314 GO:GO:0000338 GO:GO:0019781 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
EMBL:AF129083 EMBL:AF132563 RefSeq:NP_477442.1 UniGene:Dm.1223
ProteinModelPortal:Q9XZ58 SMR:Q9XZ58 DIP:DIP-22022N IntAct:Q9XZ58
MINT:MINT-884235 STRING:Q9XZ58 PaxDb:Q9XZ58 PRIDE:Q9XZ58
EnsemblMetazoa:FBtr0083292 GeneID:42000 KEGG:dme:Dmel_CG14884
CTD:42000 FlyBase:FBgn0027053 InParanoid:Q9XZ58 OrthoDB:EOG4ZCRM3
PhylomeDB:Q9XZ58 ChiTaRS:COPS5 GenomeRNAi:42000 NextBio:826668
Bgee:Q9XZ58 GermOnline:CG14884 GO:GO:0007310 Uniprot:Q9XZ58
Length = 327
Score = 93 (37.8 bits), Expect = 0.00062, P = 0.00062
Identities = 27/100 (27%), Positives = 45/100 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ ++ + + +P+ T RV A
Sbjct: 54 ISALALLKMVMHARSGGTLEVMGLMLGKVEDNT---MIVMDAFALPVEGTET--RVNAQA 108
Query: 68 EQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
Q +E +T + +K R +GW+HSHP W S +
Sbjct: 109 -QAYEYMTAYMEAAKEVGRMEHAVGWYHSHPGYGCWLSGI 147
>POMBASE|SPAC31G5.13 [details] [associations]
symbol:rpn11 "19S proteasome regulatory subunit Rpn11"
species:4896 "Schizosaccharomyces pombe" [GO:0000502 "proteasome
complex" evidence=IDA;IPI] [GO:0004843 "ubiquitin-specific protease
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0033554
"cellular response to stress" evidence=IMP] [GO:0034399 "nuclear
periphery" evidence=IDA] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IC] [GO:0046898 "response to
cycloheximide" evidence=IEA] [GO:0071947 "protein deubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IC] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
PomBase:SPAC31G5.13 GO:GO:0007346 EMBL:CU329670 GO:GO:0043161
GenomeReviews:CU329670_GR GO:GO:0033554 GO:GO:0046677 GO:GO:0035690
GO:GO:0000502 eggNOG:COG1310 GO:GO:0071313 GO:GO:0097237
GO:GO:0034399 MEROPS:M67.001 GO:GO:0004843 GO:GO:0046898
InterPro:IPR024969 Pfam:PF13012 EMBL:D84656 HOGENOM:HOG000183690
KO:K03030 OMA:MVLGQEP EMBL:D31731 EMBL:D45047 PIR:T43293 PIR:T44427
RefSeq:NP_594014.1 ProteinModelPortal:P41878 IntAct:P41878
STRING:P41878 PRIDE:P41878 EnsemblFungi:SPAC31G5.13.1
GeneID:2543040 KEGG:spo:SPAC31G5.13 OrthoDB:EOG40CMRT
NextBio:20804070 GO:GO:0071947 Uniprot:P41878
Length = 308
Score = 92 (37.4 bits), Expect = 0.00072, P = 0.00072
Identities = 30/104 (28%), Positives = 46/104 (44%)
Query: 4 DVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRV 63
+ YIS M +EV+ +++GE ++ V+ V V+ M P T V
Sbjct: 28 ECVYISSLALLKMLRHGRHGTPMEVMGLMLGEFVDDFTVRVVDVFAM--PQSGTGVS--V 83
Query: 64 EASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
EA + +F+ + K R V+GW+HSHP W S V
Sbjct: 84 EAV-DPVFQK--NMMDMLKQTGRPEMVVGWYHSHPGFGCWLSSV 124
>UNIPROTKB|F1MBP8 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 KO:K09613 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 CTD:10987 EMBL:DAAA02038695
IPI:IPI00700780 RefSeq:NP_001179068.1 UniGene:Bt.9730
ProteinModelPortal:F1MBP8 Ensembl:ENSBTAT00000003609 GeneID:507179
KEGG:bta:507179 NextBio:20867939 Uniprot:F1MBP8
Length = 334
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ G + + + +P+ T +A+
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAA 113
Query: 68 EQLFEAVTE-AEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ A E A+++ +L N IGW+HSHP W S +
Sbjct: 114 YEYMAAYIENAKQVGRLEN----AIGWYHSHPGYGCWLSGI 150
>UNIPROTKB|E2QWE0 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051726 "regulation of cell cycle"
evidence=IEA] [GO:0046328 "regulation of JNK cascade" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008180 "signalosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0045944 GO:GO:0008237
GO:GO:0051726 GO:GO:0046328 GO:GO:0008180 GO:GO:0010388 KO:K09613
OMA:SAGKVCL GeneTree:ENSGT00550000074850 CTD:10987
EMBL:AAEX03015841 RefSeq:XP_535093.1 Ensembl:ENSCAFT00000011845
GeneID:477901 KEGG:cfa:477901 NextBio:20853308 Uniprot:E2QWE0
Length = 334
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ G + + + +P+ T +A+
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAA 113
Query: 68 EQLFEAVTE-AEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ A E A+++ +L N IGW+HSHP W S +
Sbjct: 114 YEYMAAYIENAKQVGRLEN----AIGWYHSHPGYGCWLSGI 150
>UNIPROTKB|Q92905 [details] [associations]
symbol:COPS5 "COP9 signalosome complex subunit 5"
species:9606 "Homo sapiens" [GO:0006508 "proteolysis" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000338 "protein
deneddylation" evidence=IMP] [GO:0008237 "metallopeptidase
activity" evidence=IMP] [GO:0008180 "signalosome" evidence=IDA]
[GO:0010388 "cullin deneddylation" evidence=IDA] [GO:0046328
"regulation of JNK cascade" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003713 "transcription coactivator activity"
evidence=TAS] [GO:0003743 "translation initiation factor activity"
evidence=TAS] [GO:0005852 "eukaryotic translation initiation factor
3 complex" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000555
Pfam:PF01398 SMART:SM00232 GO:GO:0048471 GO:GO:0046872
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0045944 GO:GO:0006508
GO:GO:0008237 GO:GO:0051726 GO:GO:0003713 GO:GO:0006366
GO:GO:0003743 GO:GO:0046328 GO:GO:0008180 eggNOG:COG1310
Pathway_Interaction_DB:hif1apathway GO:GO:0005852 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD ChiTaRS:COPS5 EMBL:U65928
EMBL:U70734 EMBL:CR541678 EMBL:BC001187 EMBL:BC001859 EMBL:BC007272
EMBL:BX648542 EMBL:AY078082 IPI:IPI00009958 PIR:S71820
RefSeq:NP_006828.2 UniGene:Hs.491912 ProteinModelPortal:Q92905
DIP:DIP-34546N IntAct:Q92905 MINT:MINT-1188008 STRING:Q92905
PhosphoSite:Q92905 DMDM:55976562 REPRODUCTION-2DPAGE:IPI00009958
PaxDb:Q92905 PRIDE:Q92905 DNASU:10987 Ensembl:ENST00000357849
GeneID:10987 KEGG:hsa:10987 UCSC:uc003xxd.3 GeneCards:GC08M068005
HGNC:HGNC:2240 HPA:CAB004242 HPA:HPA004845 MIM:604850
neXtProt:NX_Q92905 PharmGKB:PA26757 InParanoid:Q92905
GenomeRNAi:10987 NextBio:41743 ArrayExpress:Q92905 Bgee:Q92905
CleanEx:HS_COPS5 Genevestigator:Q92905 GermOnline:ENSG00000121022
Uniprot:Q92905
Length = 334
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ G + + + +P+ T +A+
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAA 113
Query: 68 EQLFEAVTE-AEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ A E A+++ +L N IGW+HSHP W S +
Sbjct: 114 YEYMAAYIENAKQVGRLEN----AIGWYHSHPGYGCWLSGI 150
>UNIPROTKB|F2Z540 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051726 "regulation of cell cycle" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 GO:GO:0010388 OMA:SAGKVCL
GeneTree:ENSGT00550000074850 EMBL:CU582915 EMBL:JX570667
Ensembl:ENSSSCT00000006798 Uniprot:F2Z540
Length = 334
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ G + + + +P+ T +A+
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAA 113
Query: 68 EQLFEAVTE-AEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ A E A+++ +L N IGW+HSHP W S +
Sbjct: 114 YEYMAAYIENAKQVGRLEN----AIGWYHSHPGYGCWLSGI 150
>MGI|MGI:1349415 [details] [associations]
symbol:Cops5 "COP9 (constitutive photomorphogenic) homolog,
subunit 5 (Arabidopsis thaliana)" species:10090 "Mus musculus"
[GO:0000338 "protein deneddylation" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISO;IDA] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=ISO] [GO:0010388
"cullin deneddylation" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046328 "regulation of JNK cascade" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051726 "regulation of cell
cycle" evidence=IMP] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
MGI:MGI:1349415 GO:GO:0048471 GO:GO:0006355 GO:GO:0046872
GO:GO:0045944 GO:GO:0006508 GO:GO:0008237 GO:GO:0005667
GO:GO:0051726 GO:GO:0003713 GO:GO:0046328 GO:GO:0008180
eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528 KO:K09613
OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850 CTD:10987
HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:U70736 EMBL:AF068223
EMBL:AF065386 EMBL:AK012499 EMBL:AK146271 EMBL:AK151492
EMBL:BC046753 IPI:IPI00135087 RefSeq:NP_038743.1 UniGene:Mm.402384
ProteinModelPortal:O35864 STRING:O35864 PhosphoSite:O35864
REPRODUCTION-2DPAGE:O35864 PaxDb:O35864 PRIDE:O35864
Ensembl:ENSMUST00000027050 GeneID:26754 KEGG:mmu:26754
UCSC:uc007ahe.1 InParanoid:O35864 NextBio:304667 Bgee:O35864
Genevestigator:O35864 GermOnline:ENSMUSG00000025917 Uniprot:O35864
Length = 334
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ G + + + +P+ T +A+
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAA 113
Query: 68 EQLFEAVTE-AEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ A E A+++ +L N IGW+HSHP W S +
Sbjct: 114 YEYMAAYIENAKQVGRLEN----AIGWYHSHPGYGCWLSGI 150
>RGD|1310301 [details] [associations]
symbol:Cops5 "COP9 signalosome subunit 5" species:10116 "Rattus
norvegicus" [GO:0000338 "protein deneddylation" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008180 "signalosome" evidence=IEA;ISO]
[GO:0008237 "metallopeptidase activity" evidence=IEA;ISO]
[GO:0010388 "cullin deneddylation" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0046328 "regulation of JNK cascade"
evidence=IEA;ISO] [GO:0051726 "regulation of cell cycle"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000555 Pfam:PF01398 SMART:SM00232 RGD:1310301
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 EMBL:CH473984 GO:GO:0010388
HOGENOM:HOG000116528 KO:K09613 OMA:SAGKVCL MEROPS:M67.002
GeneTree:ENSGT00550000074850 CTD:10987 HOVERGEN:HBG051137
OrthoDB:EOG41NTMD EMBL:BC098736 IPI:IPI00366535
RefSeq:NP_001020866.1 UniGene:Rn.2243 STRING:Q4KM69
Ensembl:ENSRNOT00000008877 GeneID:312916 KEGG:rno:312916
UCSC:RGD:1310301 InParanoid:Q4KM69 NextBio:665375
Genevestigator:Q4KM69 Uniprot:Q4KM69
Length = 334
Score = 92 (37.4 bits), Expect = 0.00082, P = 0.00082
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ G + + + +P+ T +A+
Sbjct: 57 ISALALLKMVMHARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAA 113
Query: 68 EQLFEAVTE-AEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ A E A+++ +L N IGW+HSHP W S +
Sbjct: 114 YEYMAAYIENAKQVGRLEN----AIGWYHSHPGYGCWLSGI 150
>UNIPROTKB|Q5ZLC3 [details] [associations]
symbol:COPS5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046328 "regulation of JNK cascade" evidence=IEA] [GO:0051726
"regulation of cell cycle" evidence=IEA] [GO:0008180 "signalosome"
evidence=ISS] InterPro:IPR000555 Pfam:PF01398 SMART:SM00232
GO:GO:0045944 GO:GO:0008237 GO:GO:0051726 GO:GO:0046328
GO:GO:0008180 eggNOG:COG1310 GO:GO:0010388 HOGENOM:HOG000116528
KO:K09613 OMA:SAGKVCL MEROPS:M67.002 GeneTree:ENSGT00550000074850
CTD:10987 HOVERGEN:HBG051137 OrthoDB:EOG41NTMD EMBL:AADN02048438
EMBL:AADN02048434 EMBL:AADN02048433 EMBL:AADN02048414
EMBL:AADN02048415 EMBL:AADN02048416 EMBL:AADN02048417
EMBL:AADN02048432 EMBL:AADN02048427 EMBL:AADN02048399
EMBL:AADN02048400 EMBL:AADN02048401 EMBL:AADN02048402
EMBL:AADN02048403 EMBL:AADN02048404 EMBL:AADN02048405
EMBL:AADN02048406 EMBL:AADN02048407 EMBL:AADN02048408
EMBL:AADN02048409 EMBL:AADN02048410 EMBL:AADN02048411
EMBL:AADN02048412 EMBL:AADN02048413 EMBL:AADN02048418
EMBL:AADN02048419 EMBL:AADN02048420 EMBL:AADN02048421
EMBL:AADN02048422 EMBL:AADN02048423 EMBL:AADN02048424
EMBL:AADN02048425 EMBL:AADN02048426 EMBL:AADN02048428
EMBL:AADN02048429 EMBL:AADN02048430 EMBL:AADN02048431
EMBL:AADN02048435 EMBL:AADN02048436 EMBL:AADN02048437
EMBL:AADN02048439 EMBL:AADN02048440 EMBL:AADN02064737 EMBL:AJ719811
IPI:IPI00571765 RefSeq:NP_001034400.1 UniGene:Gga.49592
STRING:Q5ZLC3 Ensembl:ENSGALT00000023424 GeneID:426579
KEGG:gga:426579 InParanoid:Q5ZLC3 NextBio:20828097 Uniprot:Q5ZLC3
Length = 338
Score = 92 (37.4 bits), Expect = 0.00084, P = 0.00084
Identities = 27/101 (26%), Positives = 46/101 (45%)
Query: 8 ISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASP 67
IS M A S LEV+ +++G+ G + + + +P+ T +A+
Sbjct: 61 ISALALLKMVMHARSGGNLEVMGLMLGKVD---GETMIIMDSFALPVEGTETRVNAQAAA 117
Query: 68 EQLFEAVTE-AEKLSKLYNRELRVIGWFHSHPHITVWPSDV 107
+ A E A+++ +L N IGW+HSHP W S +
Sbjct: 118 YEYMAAYIENAKQVGRLEN----AIGWYHSHPGYGCWLSGI 154
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 107 107 0.00091 102 3 11 22 0.43 30
29 0.40 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 543 (58 KB)
Total size of DFA: 113 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.76u 0.12s 12.88t Elapsed: 00:00:01
Total cpu time: 12.76u 0.12s 12.88t Elapsed: 00:00:01
Start: Thu Aug 15 16:54:48 2013 End: Thu Aug 15 16:54:49 2013