Diaphorina citri psyllid: psy17875


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------
MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV
ccccEEEEcHHHHHHHHHHcccccccEEEEEccEEEEccccEEEEEEEEEEccccccccccEEECcHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccc
***DVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV
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MSLDVAYISEDVYFSMFYLALSNDKLEVLSMLIGETKEEKGVKSVHVYTMVIPLRLTSKHDRVEASPEQLFEAVTEAEKLSKLYNRELRVIGWFHSHPHITVWPSDV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0031593 [MF]polyubiquitin bindingprobableGO:0003674, GO:0043130, GO:0032182, GO:0005488, GO:0005515
GO:0070531 [CC]BRCA1-A complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0070536 [BP]protein K63-linked deubiquitinationprobableGO:0044267, GO:0044260, GO:0044238, GO:0019538, GO:0009987, GO:0070647, GO:0070646, GO:0006464, GO:0043170, GO:0071704, GO:0043412, GO:0036211, GO:0008150, GO:0044237, GO:0008152, GO:0016579
GO:0000152 [CC]nuclear ubiquitin ligase complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0000151, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0043227, GO:0043226, GO:0044422
GO:0050790 [BP]regulation of catalytic activityprobableGO:0008150, GO:0065009, GO:0065007, GO:0050789, GO:0019222
GO:0030234 [MF]enzyme regulator activityprobableGO:0003674
GO:0010165 [BP]response to X-rayprobableGO:0008150, GO:0009314, GO:0050896, GO:0010212, GO:0009628
GO:0070552 [CC]BRISC complexprobableGO:0043234, GO:0005575, GO:0032991, GO:0043231, GO:0005634, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0043229, GO:0044428, GO:0044424, GO:0043227, GO:0043226, GO:0044422

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 4B4T, chain V
Confidence level:very confident
Coverage over the Query: 2-106
View the alignment between query and template
View the model in PyMOL