Query psy17877
Match_columns 1262
No_of_seqs 46 out of 48
Neff 1.4
Searched_HMMs 13730
Date Sat Aug 17 01:18:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17877.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/17877hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qdla_ d.161.1.1 (A:) Anthran 12.8 69 0.0051 31.1 4.0 32 30-61 24-55 (422)
2 d1lpba1 g.3.10.1 (A:6-44) (Pro 10.4 34 0.0025 25.8 0.5 15 225-248 15-29 (39)
3 d1skza2 g.3.15.1 (A:59-110) Fa 9.2 57 0.0041 25.3 1.5 23 216-238 6-29 (52)
4 d1ez4a2 d.162.1.1 (A:163-334) 8.2 1.3E+02 0.0092 25.2 3.5 54 566-623 107-160 (171)
5 d1lg7a_ d.213.1.1 (A:) VSV mat 7.7 17 0.0013 34.0 -2.6 30 146-179 94-123 (170)
6 d1qjla_ g.46.1.1 (A:) Metallot 6.9 83 0.0061 22.1 1.3 10 227-236 14-23 (28)
7 d1rh7a_ g.77.1.1 (A:) Resistin 6.6 21 0.0015 30.4 -2.4 44 200-245 20-66 (81)
8 d2qn6a3 c.37.1.8 (A:2-206) Ini 5.8 98 0.0072 26.3 1.5 14 157-170 9-22 (205)
9 d1ss4a_ d.32.1.6 (A:) Hypothet 5.6 99 0.0072 23.8 1.3 23 596-618 6-28 (149)
10 d2p82a1 d.3.1.22 (A:26-359) Cy 5.6 16 0.0012 36.0 -4.3 59 8-66 197-256 (334)
No 1
>d1qdla_ d.161.1.1 (A:) Anthranilate synthase aminodeoxyisochorismate synthase/lyase subunit, TrpE {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=12.83 E-value=69 Score=31.13 Aligned_cols=32 Identities=25% Similarity=0.205 Sum_probs=21.6
Q ss_pred ccceeeeeeecceecCcceeEEEecccccEEE
Q psy17877 30 GYNKYLLESVPGEVKAGKYFHYSLNYQGPLSL 61 (1262)
Q Consensus 30 g~~k~lL~sV~GeV~AGnY~yy~Ln~~G~lsL 61 (1262)
+.+-+||||+.|.-+-|.|++.-++-.+.+.+
T Consensus 24 ~~~sfLLES~~~~~~~gRySiig~~p~~~i~~ 55 (422)
T d1qdla_ 24 FKVAGLLESIGGPQYKARYSVIAWSTNGYLKI 55 (422)
T ss_dssp CSEEEEEECC-------CEEEEEECSSCCEEE
T ss_pred CCCEEEEECCCCCCCceeEEEEEECCCcEEEE
Confidence 34679999999988899999999999988876
No 2
>d1lpba1 g.3.10.1 (A:6-44) (Pro)colipase {Pig (Sus scrofa) [TaxId: 9823]}
Probab=10.40 E-value=34 Score=25.84 Aligned_cols=15 Identities=47% Similarity=0.910 Sum_probs=10.8
Q ss_pred cCCCCCccccccccCCccccccce
Q psy17877 225 GANCTSKCDCGEINGNKCHHLTGT 248 (1262)
Q Consensus 225 ~anctskcdcgeingnkchhltgt 248 (1262)
.|.|.|+| |||-+|-
T Consensus 15 SaQCkS~C---------C~~~s~l 29 (39)
T d1lpba1 15 SAQCKSNC---------CQHDTIL 29 (39)
T ss_dssp GGGBSSSC---------EECSSSS
T ss_pred hhhhcccc---------ccCCCcc
Confidence 35677777 8988764
No 3
>d1skza2 g.3.15.1 (A:59-110) Factor Xa inhibitor antistasin {Mexican leech (Haementeria officinalis) [TaxId: 6410]}
Probab=9.21 E-value=57 Score=25.31 Aligned_cols=23 Identities=43% Similarity=0.965 Sum_probs=18.3
Q ss_pred HhhCCCCcccCCCCCccccc-ccc
Q psy17877 216 LAACPVGRWGANCTSKCDCG-EIN 238 (1262)
Q Consensus 216 l~~~p~g~w~anctskcdcg-ein 238 (1262)
+..||.|..-..-|.||||. .||
T Consensus 6 isecpegmmcsrltnkcdckidin 29 (52)
T d1skza2 6 ISECPEGMMCSRLTNKCDCKIDIN 29 (52)
T ss_dssp GGGSCTTEECCTTTSSSCEESCCC
T ss_pred cccCccccchhhhccccCceEecc
Confidence 45799999888889999996 344
No 4
>d1ez4a2 d.162.1.1 (A:163-334) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}
Probab=8.17 E-value=1.3e+02 Score=25.15 Aligned_cols=54 Identities=15% Similarity=0.202 Sum_probs=31.4
Q ss_pred eEEEeecCcccccccceeeecceeecCCCCcceeecccccchhHHHHHHHHHHHHHhh
Q psy17877 566 VTVQATLPTLTMPTLGVSFNFPVISSTPGTKTKVIDKLNIMTSDLEKSLKSVVSSVMN 623 (1262)
Q Consensus 566 vtvqatlptltmptlgvsfnfpvisstpgtktkvidklnimtsdlekslksvvssvmn 623 (1262)
..+.+-+..---. -|+-|.|||+-..-|. .+|++ |. ++.+-++.||.-+..+..
T Consensus 107 ~~~~~~~~~~~g~-~~~~~S~Pv~lg~~Gv-~~v~~-l~-Ls~~E~~~l~~s~~~l~~ 160 (171)
T d1ez4a2 107 LPVGAYMDGQYGL-NDIYIGTPAIIGGTGL-KQIIE-SP-LSADELKKMQDSAATLKK 160 (171)
T ss_dssp EEEEEEEESGGGC-EEEEEEEEEEEETTEE-EEECC-CC-CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeccccCc-cceeeeEEEEEcCCcE-EEEeC-CC-CCHHHHHHHHHHHHHHHH
Confidence 4444444433333 5899999999998884 45554 54 555544555554444433
No 5
>d1lg7a_ d.213.1.1 (A:) VSV matrix protein {Vesicular stomatitis virus, VSV [TaxId: 11276]}
Probab=7.67 E-value=17 Score=34.00 Aligned_cols=30 Identities=27% Similarity=0.638 Sum_probs=20.8
Q ss_pred eEEcCCCCCCccEEEEecCCCCccceEEEEEEee
Q psy17877 146 VVHIPESFKRPVHISVYGHPAAETSVYILDVVHR 179 (1262)
Q Consensus 146 vV~IP~sfkRPV~IgVYGHPs~e~S~y~L~Vv~~ 179 (1262)
..++||.|.||++|+-|-- +-...|.|...
T Consensus 94 m~~vpEtFrrp~~~~~ykG----tv~l~~~i~d~ 123 (170)
T d1lg7a_ 94 MLNVPEHFRRPFNIGLYKG----TVELTMTIYDD 123 (170)
T ss_dssp CCSCCEEEEEEEECSSCEE----EEEEEEEEEEC
T ss_pred ccccchhcceeeecccccc----EEEEEEEEEec
Confidence 3468999999999998842 44455555443
No 6
>d1qjla_ g.46.1.1 (A:) Metallothionein {Purple sea urchin (Strongylocentrotus purpuratus) [TaxId: 7668]}
Probab=6.91 E-value=83 Score=22.06 Aligned_cols=10 Identities=50% Similarity=1.275 Sum_probs=4.5
Q ss_pred CCCCcccccc
Q psy17877 227 NCTSKCDCGE 236 (1262)
Q Consensus 227 nctskcdcge 236 (1262)
.|.|.|.|.|
T Consensus 14 kcgsgcscte 23 (28)
T d1qjla_ 14 KCGSGCSCTE 23 (28)
T ss_dssp CTTSCCCCBT
T ss_pred ccCCCccccC
Confidence 3444444444
No 7
>d1rh7a_ g.77.1.1 (A:) Resistin-like beta (FIZZ2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.56 E-value=21 Score=30.37 Aligned_cols=44 Identities=39% Similarity=0.752 Sum_probs=30.0
Q ss_pred cceeeccccChhHHHHHhhCCCCcccCCCCCcccccc---ccCCccccc
Q psy17877 200 SQSIYCSLVSPHSMQLLAACPVGRWGANCTSKCDCGE---INGNKCHHL 245 (1262)
Q Consensus 200 ~~si~cslv~p~~~~~l~~~p~g~w~anctskcdcge---ingnkchhl 245 (1262)
.+.+.|.-| +++-.|+.||.|.=--.|.-.=-||. -+|+.||-.
T Consensus 20 ~~~l~C~SV--~s~G~lasCPaG~~vTgCaCG~aCGSWdvr~~ttCHCq 66 (81)
T d1rh7a_ 20 PKTISCTSV--TSSGRLASCPAGMVVTGCACGYGCGSWDIRNGNTCHCQ 66 (81)
T ss_dssp CCCEEEEEE--EEESSEEECCTTCEEEEEEEGGGCCCEEEETTTEEEEC
T ss_pred ccceEEEEE--eecCccccCCCCcEeecccccccccccccCCCCeEEee
Confidence 456778755 57889999999987665544334443 257788854
No 8
>d2qn6a3 c.37.1.8 (A:2-206) Initiation factor eIF2 gamma subunit, N-terminal (G) domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=5.78 E-value=98 Score=26.34 Aligned_cols=14 Identities=36% Similarity=0.520 Sum_probs=8.2
Q ss_pred cEEEEecCCCCccc
Q psy17877 157 VHISVYGHPAAETS 170 (1262)
Q Consensus 157 V~IgVYGHPs~e~S 170 (1262)
|-|+|.||..|..|
T Consensus 9 ini~iiGhVd~GKS 22 (205)
T d2qn6a3 9 VNIGVVGHVDHGKT 22 (205)
T ss_dssp EEEEEECSTTSSHH
T ss_pred eEEEEEEccCCcHH
Confidence 55666666655544
No 9
>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=5.60 E-value=99 Score=23.77 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=18.0
Q ss_pred cceeecccccchhHHHHHHHHHH
Q psy17877 596 KTKVIDKLNIMTSDLEKSLKSVV 618 (1262)
Q Consensus 596 ktkvidklnimtsdlekslksvv 618 (1262)
|..=|+-++|.++|||++++=-.
T Consensus 6 ~~~ri~Hv~i~v~Dle~s~~FY~ 28 (149)
T d1ss4a_ 6 KLLRMDNVSIVVESLDNAISFFE 28 (149)
T ss_dssp CEEEEEEEEEECSCHHHHHHHHH
T ss_pred CCCEEeEEEEEeCCHHHHHHHHH
Confidence 33447889999999999997653
No 10
>d2p82a1 d.3.1.22 (A:26-359) Cysteine protease ATG4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=5.58 E-value=16 Score=35.96 Aligned_cols=59 Identities=15% Similarity=0.311 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcccccchhhhhcccceeeeeeecceecC-cceeEEEecccccEEEEEeec
Q psy17877 8 PLLCFIGVIVGLSATDEWYENTGYNKYLLESVPGEVKA-GKYFHYSLNYQGPLSLYLTSK 66 (1262)
Q Consensus 8 pll~~~g~~~gLSa~~e~y~n~g~~k~lL~sV~GeV~A-GnY~yy~Ln~~G~lsL~L~S~ 66 (1262)
|+|+|+++-.|+...++-|-+.=..-+-+....|-||. .+-+||-+.+||.--+||.-.
T Consensus 197 p~llliplrLGld~iN~~Y~~~L~~~l~lpqsvGiiGGkp~~a~YfiG~q~d~l~YLDPH 256 (334)
T d2p82a1 197 PLLLIVPLRLGINQINPVYVDAFKECFKMPQSLGALGGKPNNAYYFIGFLGDELIFLDPH 256 (334)
T ss_dssp CEEEEEEEECCSSSCCGGGHHHHHHHHHSTTEEEEEEEETTEEEEEEEEETTEEEEECCC
T ss_pred ceEEEEeeecCCCCCCHHHHHHHHHHhCCcccceEecCCCCCceEEEEEcCCeEEeecCc
Confidence 78888889999998888776543333333344565542 467999999999999999987
Done!