BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17879
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69ZX8|ABLM3_MOUSE Actin-binding LIM protein 3 OS=Mus musculus GN=Ablim3 PE=1 SV=2
Length = 682
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY LL++T RLP DVDR LERHLS EF +F T +EF RL W+RN+LKK
Sbjct: 618 KIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFERLALWKRNELKK 677
Query: 150 RARLF 154
+ARLF
Sbjct: 678 QARLF 682
>sp|O94929|ABLM3_HUMAN Actin-binding LIM protein 3 OS=Homo sapiens GN=ABLIM3 PE=1 SV=3
Length = 683
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY LL++T RLP DVDR LERHLS EF +F T +EF RL W+RN+LKK
Sbjct: 619 KIYPYELLLVTTRGRNRLPKDVDRTRLERHLSQEEFYQVFGMTISEFDRLALWKRNELKK 678
Query: 150 RARLF 154
+ARLF
Sbjct: 679 QARLF 683
>sp|Q9WV69|DEMA_MOUSE Dematin OS=Mus musculus GN=Epb49 PE=1 SV=1
Length = 405
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 66/128 (51%), Gaps = 13/128 (10%)
Query: 38 LHSNIHPHHHVPNGG--------APELPVSSTYAGSLGYAASYSNHIQRSLPNMSQPMSL 89
LHS +P+ G + E S + AGS G + N S P L
Sbjct: 280 LHSGTSKSSSLPSYGRTTLSRLQSTEFSPSGSEAGSPGLQNGEGQRGRMDRGN-SLPCVL 338
Query: 90 EPPKIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRND 146
E KIYPY +L++TN +LPP VDR LERHLS +F +F + EF +L W+RN+
Sbjct: 339 EQ-KIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNE 397
Query: 147 LKKRARLF 154
LKK+A LF
Sbjct: 398 LKKKASLF 405
>sp|Q6H8Q1|ABLM2_HUMAN Actin-binding LIM protein 2 OS=Homo sapiens GN=ABLIM2 PE=1 SV=2
Length = 611
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITN---YRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY LI+TN +LP DVDR LERHLS EF+ +F + EF RL W+RNDLKK
Sbjct: 547 KIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKK 606
Query: 150 RARLF 154
+A LF
Sbjct: 607 KALLF 611
>sp|Q6KC51|ABLM2_RAT Actin-binding LIM protein 2 OS=Rattus norvegicus GN=Ablim2 PE=2
SV=1
Length = 612
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITN---YRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY LI+TN +LP DVDR LERHLS EF+ +F + EF RL W+RNDLKK
Sbjct: 548 KIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKK 607
Query: 150 RARLF 154
+A LF
Sbjct: 608 KALLF 612
>sp|Q8BL65|ABLM2_MOUSE Actin-binding LIM protein 2 OS=Mus musculus GN=Ablim2 PE=1 SV=1
Length = 612
Score = 74.3 bits (181), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITN---YRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY LI+TN +LP DVDR LERHLS EF+ +F + EF RL W+RNDLKK
Sbjct: 548 KIYPYDSLIVTNRIRVKLPKDVDRTRLERHLSPEEFQEVFGMSIEEFDRLALWKRNDLKK 607
Query: 150 RARLF 154
+A LF
Sbjct: 608 KALLF 612
>sp|Q5R4B6|DEMA_PONAB Dematin OS=Pongo abelii GN=EPB49 PE=2 SV=1
Length = 405
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY +L++TN +LPP VDR LERHLS +F +F + EF +L W+RN+LKK
Sbjct: 341 KIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKK 400
Query: 150 RARLF 154
+A LF
Sbjct: 401 KASLF 405
>sp|Q08495|DEMA_HUMAN Dematin OS=Homo sapiens GN=EPB49 PE=1 SV=3
Length = 405
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY +L++TN +LPP VDR LERHLS +F +F + EF +L W+RN+LKK
Sbjct: 341 KIYPYEMLVVTNKGRTKLPPGVDRMRLERHLSAEDFSRVFAMSPEEFGKLALWKRNELKK 400
Query: 150 RARLF 154
+A LF
Sbjct: 401 KASLF 405
>sp|Q08DM1|DEMA_BOVIN Dematin OS=Bos taurus GN=EPB49 PE=2 SV=1
Length = 406
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 93 KIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
KIYPY +L++TN +LPP VDR LERHLS +F +F + EF +L W+RN+LKK
Sbjct: 342 KIYPYEMLVVTNRGRTKLPPGVDRMRLERHLSAEDFSRVFSMSPEEFGKLALWKRNELKK 401
Query: 150 RARLF 154
+A LF
Sbjct: 402 KASLF 406
>sp|O14639|ABLM1_HUMAN Actin-binding LIM protein 1 OS=Homo sapiens GN=ABLIM1 PE=1 SV=3
Length = 778
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 9/79 (11%)
Query: 79 SLPNMSQPMSLEPPKIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAE 135
S+PNM +P KI+PY +L++TN ++ +VDR LERHL+ F +F + E
Sbjct: 706 SMPNMLEP------KIFPYEMLMVTNRGRNKILREVDRTRLERHLAPEVFREIFGMSIQE 759
Query: 136 FYRLPTWRRNDLKKRARLF 154
F RLP WRRND+KK+A+LF
Sbjct: 760 FDRLPLWRRNDMKKKAKLF 778
>sp|Q8K4G5|ABLM1_MOUSE Actin-binding LIM protein 1 OS=Mus musculus GN=Ablim1 PE=1 SV=1
Length = 861
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 9/79 (11%)
Query: 79 SLPNMSQPMSLEPPKIYPYHLLIITNY---RLPPDVDRKNLERHLSDVEFETLFLCTRAE 135
S+PNM +P KI+PY +L++TN ++ DVDR LERHL+ F +F + E
Sbjct: 789 SMPNMLEP------KIFPYEMLMVTNRGRNKILRDVDRTRLERHLAPEVFWEIFGMSIQE 842
Query: 136 FYRLPTWRRNDLKKRARLF 154
F +LP WRRND+KK+A+LF
Sbjct: 843 FDKLPLWRRNDMKKKAKLF 861
>sp|Q54K81|TALB_DICDI Talin-B OS=Dictyostelium discoideum GN=talB PE=2 SV=1
Length = 2614
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 108 PPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF 154
P ++D NLE +LSD EF+ +F C R+E +PTW+RN++K + LF
Sbjct: 2568 PANIDHSNLEIYLSDEEFKAVFNCERSELAAMPTWKRNNIKTKLGLF 2614
>sp|O88398|AVIL_MOUSE Advillin OS=Mus musculus GN=Avil PE=1 SV=2
Length = 819
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 92 PKIYPYHLLII-TNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKR 150
PK YP +L+ N LP DVD E +LS+ +F ++F TR +F LP W++ LKK
Sbjct: 756 PKYYPVEVLLKGQNQELPEDVDPAKKENYLSEQDFVSVFGITRGQFTALPGWKQLQLKKE 815
Query: 151 ARLF 154
LF
Sbjct: 816 RGLF 819
>sp|P02640|VILI_CHICK Villin-1 OS=Gallus gallus GN=VIL1 PE=1 SV=2
Length = 826
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 88 SLEPPKIYPYHLLIITNYR---LPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRR 144
+L P K+ + L ++ N LP VD E HLSD +F+ +F TR+ F LP W++
Sbjct: 757 TLVPTKLETFPLDVLVNTAAEDLPRGVDPSRKENHLSDEDFKAVFGMTRSAFANLPLWKQ 816
Query: 145 NDLKKRARLF 154
+LKK LF
Sbjct: 817 QNLKKEKGLF 826
>sp|O75366|AVIL_HUMAN Advillin OS=Homo sapiens GN=AVIL PE=1 SV=3
Length = 819
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 92 PKIYPYHLLIIT-NYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKR 150
PK YP +L+ N LP DV+ E +LS+ +F ++F TR +F LP W++ +KK
Sbjct: 756 PKYYPIAVLLKNQNQELPEDVNPAKKENYLSEQDFVSVFGITRGQFAALPGWKQLQMKKE 815
Query: 151 ARLF 154
LF
Sbjct: 816 KGLF 819
>sp|Q9WU06|AVIL_RAT Advillin OS=Rattus norvegicus GN=Avil PE=2 SV=1
Length = 829
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 92 PKIYPYHLLIIT-NYRLPPDVDRKNLERHLS-DVEFETLFLCTRAEFYRLPTWRRNDLKK 149
PK YP +L+ + + LP DVD E +LS + +F ++F TR +F LP W++ LKK
Sbjct: 765 PKYYPVEVLLKSQDQELPEDVDPTKKENYLSXERDFVSVFGITRGQFVSLPGWKQLQLKK 824
Query: 150 RARLF 154
A LF
Sbjct: 825 EAGLF 829
>sp|Q8WQ85|VILD_DICDI Villidin OS=Dictyostelium discoideum GN=vilA PE=1 SV=2
Length = 1704
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 93 KIYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRAR 152
+IY Y L+ LP VD L+ +L+D +FE +F TR E+ ++P W+R +KK
Sbjct: 1645 EIYTYEELLADP--LPAGVDSTKLDTYLNDEDFEKVFKMTRTEWLKIPAWKREGIKKELF 1702
Query: 153 LF 154
LF
Sbjct: 1703 LF 1704
>sp|O81645|VILI3_ARATH Villin-3 OS=Arabidopsis thaliana GN=VLN3 PE=1 SV=2
Length = 965
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 111 VDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF 154
+D K E +LS+VEF+T+F + FY+LP W+++ LKK+ LF
Sbjct: 922 IDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKKKFNLF 965
>sp|O81643|VILI1_ARATH Villin-1 OS=Arabidopsis thaliana GN=VLN1 PE=2 SV=2
Length = 909
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 95 YPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF 154
Y Y L + + + D+D E +L++ EFE F ++EFY LP W++N LK LF
Sbjct: 850 YSYEQLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF 909
>sp|O65570|VILI4_ARATH Villin-4 OS=Arabidopsis thaliana GN=VLN4 PE=1 SV=1
Length = 974
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 95 YPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF 154
+PY L T+ D+D E +LS EF+ F T+ FY+LP W++N K +LF
Sbjct: 915 HPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWKQNKFKMAVQLF 974
>sp|Q23989|QUAI_DROME Villin-like protein quail OS=Drosophila melanogaster GN=qua PE=2
SV=2
Length = 888
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 93 KIYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRAR 152
K YP +LI LPPD++ E HL+ +F ++F + EF LP W++ +LKK+ +
Sbjct: 827 KKYPLTVLIQEMDMLPPDINPLKREVHLTHDDFVSVFNMSFYEFDELPKWKKMELKKQFK 886
Query: 153 LF 154
LF
Sbjct: 887 LF 888
>sp|P09327|VILI_HUMAN Villin-1 OS=Homo sapiens GN=VIL1 PE=1 SV=4
Length = 827
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 82 NMSQPMSLEPPKIYPYHLLIITNYR-LPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLP 140
N + +S P I+P L+ LP VD E HLS +F F T A F LP
Sbjct: 754 NANSNLSSGPLPIFPLEQLVNKPVEELPEGVDPSRKEEHLSIEDFTQAFGMTPAAFSALP 813
Query: 141 TWRRNDLKKRARLF 154
W++ +LKK LF
Sbjct: 814 RWKQQNLKKEKGLF 827
>sp|Q3SZP7|VILI_BOVIN Villin-1 OS=Bos taurus GN=VIL1 PE=2 SV=3
Length = 827
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 82 NMSQPMSLEPPKIYPYHLLI-ITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLP 140
N + +S P I+P L+ LP VD E HLS +F T + F+ LP
Sbjct: 754 NANSNLSSGPLPIFPLEQLVNKPTEELPEGVDPSRREEHLSIEDFTRALGMTPSAFWALP 813
Query: 141 TWRRNDLKKRARLF 154
W++ +LKK LF
Sbjct: 814 RWKQQNLKKEKGLF 827
>sp|Q8K4L3|SVIL_MOUSE Supervillin OS=Mus musculus GN=Svil PE=1 SV=1
Length = 2170
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 94 IYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARL 153
IYP L+ LP VD LE +L+D +FE +R EF LPTW++ +LKK L
Sbjct: 2112 IYPLADLLARP--LPEGVDPLKLEIYLTDEDFEFALDMSRDEFNALPTWKQVNLKKSKGL 2169
Query: 154 F 154
F
Sbjct: 2170 F 2170
>sp|O15195|VILL_HUMAN Villin-like protein OS=Homo sapiens GN=VILL PE=2 SV=3
Length = 856
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 107 LPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF 154
LP VD E +LSD +F+ +F ++ EFY + TWR+ KK+ F
Sbjct: 809 LPEGVDPARREFYLSDSDFQDIFGKSKEEFYSMATWRQRQEKKQLGFF 856
>sp|Q29261|VILI_PIG Villin-1 OS=Sus scrofa GN=VIL1 PE=2 SV=2
Length = 827
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 82 NMSQPMSLEPPKIYPYHLLI-ITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLP 140
N + +S P I+P L+ LP VD E HLS +F T A F LP
Sbjct: 754 NANTNLSSGPLPIFPLEQLVNKPAEELPQGVDPSRREEHLSIEDFTKALGMTPAAFSALP 813
Query: 141 TWRRNDLKKRARLF 154
W++ +LKK LF
Sbjct: 814 RWKQQNLKKEKGLF 827
>sp|O95425|SVIL_HUMAN Supervillin OS=Homo sapiens GN=SVIL PE=1 SV=2
Length = 2214
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 94 IYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARL 153
IYP L+ LP VD LE +L+D +FE TR E+ LP W++ +LKK L
Sbjct: 2156 IYPLADLLARP--LPEGVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGL 2213
Query: 154 F 154
F
Sbjct: 2214 F 2214
>sp|O46385|SVIL_BOVIN Supervillin OS=Bos taurus GN=SVIL PE=1 SV=2
Length = 2194
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 94 IYPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARL 153
IYP L+ LP VD LE +L+D +FE TR E+ LP W++ +LKK L
Sbjct: 2136 IYPLADLLARP--LPEGVDPLKLEIYLTDEDFEFALDMTRDEYNALPAWKQVNLKKAKGL 2193
Query: 154 F 154
F
Sbjct: 2194 F 2194
>sp|Q62468|VILI_MOUSE Villin-1 OS=Mus musculus GN=Vil1 PE=1 SV=3
Length = 827
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 87 MSLEPPKIYPYHLLIITNYR-LPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRN 145
+S P +P L+ + LP VD E HLS +F T A F LP W++
Sbjct: 759 LSSGPLPTFPLEQLVNKSVEDLPEGVDPSRKEEHLSTEDFTRALGMTPAAFSALPRWKQQ 818
Query: 146 DLKKRARLF 154
++KK LF
Sbjct: 819 NIKKEKGLF 827
>sp|O81644|VILI2_ARATH Villin-2 OS=Arabidopsis thaliana GN=VLN2 PE=1 SV=2
Length = 976
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 111 VDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF 154
+D K E +LS+ EF+++F + F LP W+++ LKK+ LF
Sbjct: 933 IDFKRREAYLSEEEFQSVFGIEKEAFNNLPRWKQDLLKKKFDLF 976
>sp|P36418|VILB_DICDI Protovillin OS=Dictyostelium discoideum GN=vilB PE=1 SV=1
Length = 959
Score = 38.1 bits (87), Expect = 0.023, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 107 LPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRARLF 154
LP D+D+ L +LSD EF + F T+ F + P W+ L+ LF
Sbjct: 912 LPNDIDKSCLHLYLSDEEFLSTFKMTKEIFQKTPAWKTKQLRVDNGLF 959
>sp|Q91YD6|VILL_MOUSE Villin-like protein OS=Mus musculus GN=Vill PE=2 SV=1
Length = 859
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 107 LPPDVDRKNLERHLSDVEFETLFLCTRAEFYRL 139
LPP VD E +LSD +F+ +F ++ EFY +
Sbjct: 812 LPPGVDPARKEFYLSDSDFQDIFGKSKEEFYSM 844
>sp|Q06419|VPA_BPP2 Replication gene A protein OS=Enterobacteria phage P2 GN=A PE=2
SV=2
Length = 761
Score = 32.0 bits (71), Expect = 1.4, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 97 YHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKKRA 151
Y L RL P ++R N +RH + + LFL R + RLP +LKK A
Sbjct: 86 YFLTSTFQRRLWPRIERVN-QRHEMNTDASLLFLAERDHYARLPGMNDKELKKFA 139
>sp|A8EWW1|END4_ARCB4 Probable endonuclease 4 OS=Arcobacter butzleri (strain RM4018)
GN=nfo PE=3 SV=1
Length = 280
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 46 HHVPNGGAPELPVSSTYAGSLGYAASYSNHIQ---RSLPNMSQPM---SLEPPKIYPYHL 99
H +GG P+++T G+ +A N Q ++L N + + LE KI P H+
Sbjct: 7 HVSASGGVFNAPINATQIGAKAFALFTKNQRQWSAKALDNKTIDLWFKELEKSKIEPKHI 66
Query: 100 LIITNYRLP---PDVD--RKNLERHLSDVEFETLFLCTRAEFY 137
L +Y + PD D K++E L +V+ + R F+
Sbjct: 67 LPHDSYLINLGHPDSDAREKSIESFLDEVQRCEILALDRLNFH 109
>sp|Q8BMI0|FBX38_MOUSE F-box only protein 38 OS=Mus musculus GN=Fbxo38 PE=1 SV=1
Length = 1194
Score = 31.2 bits (69), Expect = 2.5, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 25/55 (45%)
Query: 95 YPYHLLIITNYRLPPDVDRKNLERHLSDVEFETLFLCTRAEFYRLPTWRRNDLKK 149
YPYH+ II + PP+V K R+ D + EF+ T DLKK
Sbjct: 1029 YPYHICIIHEFSNPPNVRNKVRIRNWMDTIANINQELIKYEFFLEATRTEEDLKK 1083
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,936,826
Number of Sequences: 539616
Number of extensions: 2584873
Number of successful extensions: 5536
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 5483
Number of HSP's gapped (non-prelim): 58
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)