Your job contains 1 sequence.
>psy17882
MAVKWAKNLPSFAALPFRDQVILLEESWSELFLLNAIQWSLPLLESSPLFNASEHVAAVP
NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA
QVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK
N
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17882
(181 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-041114-63 - symbol:nr2e3 "nuclear receptor ... 519 7.4e-50 1
UNIPROTKB|F1P0M4 - symbol:NR2E3 "Uncharacterized protein"... 506 1.8e-48 1
UNIPROTKB|F1SIS0 - symbol:F1SIS0 "Uncharacterized protein... 505 2.3e-48 1
UNIPROTKB|Q9Y5X4 - symbol:NR2E3 "Photoreceptor-specific n... 504 2.9e-48 1
UNIPROTKB|F1ML62 - symbol:NR2E3 "Photoreceptor-specific n... 500 7.7e-48 1
MGI|MGI:1346317 - symbol:Nr2e3 "nuclear receptor subfamil... 499 9.8e-48 1
FB|FBgn0034012 - symbol:Hr51 "Hormone receptor 51" specie... 490 8.8e-47 1
UNIPROTKB|Q9TTF0 - symbol:NR2E3 "Photoreceptor-specific n... 490 8.8e-47 1
ZFIN|ZDB-GENE-040801-127 - symbol:nr2e1 "nuclear receptor... 321 7.1e-29 1
MGI|MGI:1100526 - symbol:Nr2e1 "nuclear receptor subfamil... 314 3.9e-28 1
UNIPROTKB|Q91379 - symbol:NR2E1 "Nuclear receptor subfami... 311 8.2e-28 1
UNIPROTKB|F1MN68 - symbol:NR2E1 "Uncharacterized protein"... 311 8.2e-28 1
UNIPROTKB|F1PD89 - symbol:NR2E1 "Uncharacterized protein"... 311 8.2e-28 1
UNIPROTKB|F1Q176 - symbol:NR2E1 "Uncharacterized protein"... 311 8.2e-28 1
UNIPROTKB|Q6ZMP8 - symbol:NR2E1 "Nuclear receptor subfami... 311 8.2e-28 1
UNIPROTKB|Q9Y466 - symbol:NR2E1 "Nuclear receptor subfami... 311 8.2e-28 1
UNIPROTKB|F1RT26 - symbol:NR2E1 "Uncharacterized protein"... 311 8.2e-28 1
UNIPROTKB|I3LU21 - symbol:NR2E1 "Uncharacterized protein"... 311 8.2e-28 1
UNIPROTKB|A6QPQ9 - symbol:NR2F1 "NR2F1 protein" species:9... 302 7.3e-27 1
UNIPROTKB|F1N056 - symbol:NR2F1 "COUP transcription facto... 302 7.3e-27 1
UNIPROTKB|Q9TTR8 - symbol:NR2F1 "COUP transcription facto... 302 7.3e-27 1
UNIPROTKB|P10589 - symbol:NR2F1 "COUP transcription facto... 302 7.3e-27 1
UNIPROTKB|F1RNX7 - symbol:NR2F1 "Uncharacterized protein"... 302 7.3e-27 1
MGI|MGI:1352451 - symbol:Nr2f1 "nuclear receptor subfamil... 302 7.3e-27 1
UNIPROTKB|F2Z3S9 - symbol:Nr2f1 "Protein Nr2f1" species:1... 302 7.3e-27 1
UNIPROTKB|F1NAB6 - symbol:LOC100859519 "Uncharacterized p... 300 1.2e-26 1
UNIPROTKB|F1NGT1 - symbol:LOC100859519 "Uncharacterized p... 300 1.2e-26 1
UNIPROTKB|F1NJL8 - symbol:LOC100859519 "Uncharacterized p... 300 1.2e-26 1
UNIPROTKB|Q90733 - symbol:NR2F2 "COUP transcription facto... 300 1.2e-26 1
UNIPROTKB|A4IFS2 - symbol:NR2F2 "NR2F2 protein" species:9... 300 1.2e-26 1
UNIPROTKB|Q9TTR7 - symbol:NR2F2 "COUP transcription facto... 300 1.2e-26 1
UNIPROTKB|F1PX81 - symbol:NR2F2 "Uncharacterized protein"... 300 1.2e-26 1
UNIPROTKB|P24468 - symbol:NR2F2 "COUP transcription facto... 300 1.2e-26 1
UNIPROTKB|B5A7P0 - symbol:Nr2f2 "Orphan nuclear receptor ... 300 1.2e-26 1
UNIPROTKB|F1SCJ6 - symbol:NR2F2 "Uncharacterized protein"... 300 1.2e-26 1
MGI|MGI:1352452 - symbol:Nr2f2 "nuclear receptor subfamil... 300 1.2e-26 1
RGD|69305 - symbol:Nr2f2 "nuclear receptor subfamily 2, g... 300 1.2e-26 1
UNIPROTKB|O09018 - symbol:Nr2f2 "COUP transcription facto... 300 1.2e-26 1
ZFIN|ZDB-GENE-980526-115 - symbol:nr2f1a "nuclear recepto... 300 1.2e-26 1
ZFIN|ZDB-GENE-990415-252 - symbol:nr2f2 "nuclear receptor... 300 1.2e-26 1
FB|FBgn0015381 - symbol:dsf "dissatisfaction" species:722... 308 1.4e-26 1
UNIPROTKB|F1N3S3 - symbol:NR2F6 "Uncharacterized protein"... 299 1.5e-26 1
UNIPROTKB|E2R3D0 - symbol:NR2F6 "Uncharacterized protein"... 299 1.5e-26 1
UNIPROTKB|P10588 - symbol:NR2F6 "Nuclear receptor subfami... 299 1.5e-26 1
UNIPROTKB|F1S962 - symbol:NR2F6 "Uncharacterized protein"... 299 1.5e-26 1
MGI|MGI:1352453 - symbol:Nr2f6 "nuclear receptor subfamil... 298 1.9e-26 1
ZFIN|ZDB-GENE-990415-253 - symbol:nr2f5 "nuclear receptor... 297 2.5e-26 1
ZFIN|ZDB-GENE-040426-2351 - symbol:nr2f6b "nuclear recept... 295 4.0e-26 1
ZFIN|ZDB-GENE-030131-4362 - symbol:nr2f6a "nuclear recept... 293 6.6e-26 1
RGD|621685 - symbol:Nr2f6 "nuclear receptor subfamily 2, ... 286 3.6e-25 1
UNIPROTKB|O09017 - symbol:Nr2f6 "Nuclear receptor subfami... 286 3.6e-25 1
ZFIN|ZDB-GENE-040426-1438 - symbol:nr2f1b "nuclear recept... 282 9.7e-25 1
UNIPROTKB|F6Y5T4 - symbol:NR2F2 "Uncharacterized protein"... 278 2.8e-24 1
UNIPROTKB|E2R3A8 - symbol:E2R3A8 "Uncharacterized protein... 278 2.9e-24 1
UNIPROTKB|E2QW41 - symbol:NR2F2 "Uncharacterized protein"... 274 6.8e-24 1
UNIPROTKB|F1NTE7 - symbol:F1NTE7 "Uncharacterized protein... 266 4.8e-23 1
UNIPROTKB|F1NNE1 - symbol:F1NNE1 "Uncharacterized protein... 257 4.3e-22 1
UNIPROTKB|P51128 - symbol:rxra "Retinoic acid receptor RX... 229 2.1e-18 1
UNIPROTKB|B3KY83 - symbol:RXRA "cDNA FLJ16020 fis, clone ... 223 3.2e-18 1
UNIPROTKB|F1P6M9 - symbol:RXRA "Uncharacterized protein" ... 224 7.4e-18 1
UNIPROTKB|P19793 - symbol:RXRA "Retinoic acid receptor RX... 223 8.2e-18 1
MGI|MGI:98214 - symbol:Rxra "retinoid X receptor alpha" s... 223 8.5e-18 1
RGD|3610 - symbol:Rxra "retinoid X receptor alpha" specie... 223 8.5e-18 1
UNIPROTKB|Q0VJ96 - symbol:Rxra "Retinoic acid receptor RX... 223 8.5e-18 1
UNIPROTKB|P51129 - symbol:rxrg "Retinoic acid receptor RX... 223 8.6e-18 1
UNIPROTKB|F1MX52 - symbol:RXRA "Uncharacterized protein" ... 223 8.9e-18 1
UNIPROTKB|F1NH64 - symbol:RXRA "Uncharacterized protein" ... 222 9.7e-18 1
ZFIN|ZDB-GENE-990415-243 - symbol:rxrab "retinoid x recep... 219 1.1e-17 1
ZFIN|ZDB-GENE-040718-34 - symbol:rxrgb "retinoid X recept... 220 1.7e-17 1
ZFIN|ZDB-GENE-070314-2 - symbol:rxraa "retinoid X recepto... 220 2.1e-17 1
ZFIN|ZDB-GENE-980526-36 - symbol:rxrga "retinoid x recept... 218 2.5e-17 1
UNIPROTKB|F8VZR5 - symbol:RXRB "Retinoic acid receptor RX... 214 4.6e-17 1
UNIPROTKB|F8VNP5 - symbol:RXRB "Retinoic acid receptor RX... 214 4.7e-17 1
MGI|MGI:98216 - symbol:Rxrg "retinoid X receptor gamma" s... 215 6.2e-17 1
UNIPROTKB|Q0VC20 - symbol:RXRG "Retinoic acid receptor RX... 214 8.0e-17 1
UNIPROTKB|E2RD69 - symbol:RXRG "Uncharacterized protein" ... 214 8.0e-17 1
UNIPROTKB|P48443 - symbol:RXRG "Retinoic acid receptor RX... 214 8.0e-17 1
UNIPROTKB|Q0GFF6 - symbol:RXRG "Retinoic acid receptor RX... 214 8.0e-17 1
RGD|620046 - symbol:Rxrg "retinoid X receptor gamma" spec... 214 8.0e-17 1
UNIPROTKB|F1NSP3 - symbol:RXRG "Retinoic acid receptor RX... 214 8.2e-17 1
UNIPROTKB|P28701 - symbol:RXRG "Retinoic acid receptor RX... 214 8.2e-17 1
UNIPROTKB|A6H7I6 - symbol:RXRB "Uncharacterized protein" ... 214 1.1e-16 1
UNIPROTKB|A5D9P3 - symbol:RXRB "Retinoid X receptor, beta... 214 1.1e-16 1
UNIPROTKB|Q5TJF7 - symbol:RXRB "Retinoic acid receptor RX... 214 1.1e-16 1
UNIPROTKB|P28702 - symbol:RXRB "Retinoic acid receptor RX... 214 1.1e-16 1
RGD|3611 - symbol:Rxrb "retinoid X receptor beta" species... 212 1.3e-16 1
MGI|MGI:98215 - symbol:Rxrb "retinoid X receptor beta" sp... 212 1.8e-16 1
UNIPROTKB|E9PK95 - symbol:RXRB "Retinoic acid receptor RX... 204 3.7e-16 1
UNIPROTKB|Q7SIF6 - symbol:Q7SIF6 "Gene regulation protein... 162 5.6e-16 2
UNIPROTKB|A5D9P5 - symbol:RXRB "Retinoid X receptor, beta... 204 7.3e-16 1
MGI|MGI:1353604 - symbol:Hnf4g "hepatocyte nuclear factor... 203 9.0e-16 1
UNIPROTKB|E2R9K8 - symbol:HNF4G "Uncharacterized protein"... 203 1.3e-15 1
UNIPROTKB|F1PUF6 - symbol:RXRB "Retinoic acid receptor RX... 204 1.4e-15 1
ZFIN|ZDB-GENE-030131-1077 - symbol:hnf4a "hepatocyte nucl... 202 1.6e-15 1
UNIPROTKB|F1N2D7 - symbol:HNF4G "Uncharacterized protein"... 200 1.9e-15 1
UNIPROTKB|Q14541 - symbol:HNF4G "Hepatocyte nuclear facto... 200 1.9e-15 1
ZFIN|ZDB-GENE-990415-242 - symbol:rxrbb "retinoid x recep... 200 2.1e-15 1
UNIPROTKB|F1M9P1 - symbol:Rxrb "Retinoic acid receptor RX... 202 2.2e-15 1
UNIPROTKB|F1MGG2 - symbol:HNF4G "Uncharacterized protein"... 200 2.2e-15 1
RGD|1310102 - symbol:Hnf4g "hepatocyte nuclear factor 4, ... 198 2.2e-15 1
WARNING: Descriptions of 202 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-041114-63 [details] [associations]
symbol:nr2e3 "nuclear receptor subfamily 2, group E,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041114-63 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL929050
IPI:IPI00511770 ProteinModelPortal:F1QGF3
Ensembl:ENSDART00000127099 ArrayExpress:F1QGF3 Bgee:F1QGF3
Uniprot:F1QGF3
Length = 426
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 104/181 (57%), Positives = 130/181 (71%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M+VKWAKNLP F+ LPFRDQVI AIQWSLPL ++ PL + + ++
Sbjct: 248 MSVKWAKNLPVFSHLPFRDQVILLEEAWSELFLLCAIQWSLPL-DNCPLLSLPD-LSPTG 305
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
GK S +A+DVRVL V RF+ + VDP EFACLKA+VLFK ETRGLKD QVENLQDQ+
Sbjct: 306 QGKGSPSASDVRVLQEVFSRFKPLQVDPTEFACLKAIVLFKPETRGLKDPEQVENLQDQS 365
Query: 121 QVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
QV+LAQH+ T +P+Q ARFGRLLL+ + S R++H+FF +T+ NT MEKLLCDM+K
Sbjct: 366 QVLLAQHIHTLYPSQVARFGRLLLLLPSLHFVSSERIEHLFFQRTIGNTPMEKLLCDMFK 425
Query: 181 N 181
N
Sbjct: 426 N 426
>UNIPROTKB|F1P0M4 [details] [associations]
symbol:NR2E3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0045872 "positive regulation of
rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0030522 OMA:MLSQHTK EMBL:AADN02051066 IPI:IPI00600137
Ensembl:ENSGALT00000003264 Uniprot:F1P0M4
Length = 405
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 107/182 (58%), Positives = 124/182 (68%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
MAVKWAKNLP F+ LPFRDQVI AIQWS+PL ES PL E P
Sbjct: 230 MAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLCAIQWSMPL-ESCPLLAVPE-----P 283
Query: 61 N-GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
+ GK A DVR L L RF+ + VDP EFAC+KAVVLFK ETRGLKD QVENLQDQ
Sbjct: 284 SPGKLLPAAVDVRALQETLGRFKALAVDPTEFACMKAVVLFKPETRGLKDPEQVENLQDQ 343
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMY 179
+QVML QH R+H+P QP RFG+LLL+ R + S RV+ +FF +T+ NT MEKLLCDM+
Sbjct: 344 SQVMLGQHNRSHYPGQPVRFGKLLLLLPALRFLSSERVELLFFRRTIGNTPMEKLLCDMF 403
Query: 180 KN 181
KN
Sbjct: 404 KN 405
>UNIPROTKB|F1SIS0 [details] [associations]
symbol:F1SIS0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045872
"positive regulation of rhodopsin gene expression" evidence=IEA]
[GO:0042462 "eye photoreceptor cell development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 OMA:MLSQHTK GO:GO:0045872
EMBL:CU570658 Ensembl:ENSSSCT00000005490 Uniprot:F1SIS0
Length = 419
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 103/181 (56%), Positives = 126/181 (69%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
MAVKWAKNLP F++LPFRDQVI AIQWSLPL +S PL E AA
Sbjct: 240 MAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPL-DSCPLLVPPEASAAGS 298
Query: 61 N-GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
+ G+ + +A+ RVL + RFR + VDP EFAC+KA+VLFK ETRGLKD VE LQDQ
Sbjct: 299 SQGRLALASAETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQ 358
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMY 179
+QVML+QH + HHP+QP RFG+LLL+ R + S RV+ +FF KT+ NT MEKLLCDM+
Sbjct: 359 SQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFLTSERVELLFFRKTIGNTPMEKLLCDMF 418
Query: 180 K 180
K
Sbjct: 419 K 419
>UNIPROTKB|Q9Y5X4 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007602 "phototransduction"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 Orphanet:791 GO:GO:0006367 GO:GO:0007602
HOGENOM:HOG000260820 HOVERGEN:HBG005606 eggNOG:NOG277339
OrthoDB:EOG41C6WF EMBL:AF121129 EMBL:AF148128 EMBL:AJ276674
IPI:IPI00001888 IPI:IPI00215922 RefSeq:NP_055064.1
RefSeq:NP_057430.1 UniGene:Hs.187354 ProteinModelPortal:Q9Y5X4
SMR:Q9Y5X4 MINT:MINT-4302911 STRING:Q9Y5X4 PhosphoSite:Q9Y5X4
DMDM:8928275 PRIDE:Q9Y5X4 DNASU:10002 GeneID:10002 KEGG:hsa:10002
UCSC:uc002ath.1 CTD:10002 GeneCards:GC15P072084 HGNC:HGNC:7974
MIM:268100 MIM:604485 MIM:611131 neXtProt:NX_Q9Y5X4 Orphanet:53540
PharmGKB:PA31757 InParanoid:Q9Y5X4 KO:K08546 BindingDB:Q9Y5X4
ChEMBL:CHEMBL4374 GenomeRNAi:10002 NextBio:37775 CleanEx:HS_NR2E3
Genevestigator:Q9Y5X4 GermOnline:ENSG00000031544 Uniprot:Q9Y5X4
Length = 410
Score = 504 (182.5 bits), Expect = 2.9e-48, P = 2.9e-48
Identities = 102/182 (56%), Positives = 125/182 (68%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAV- 59
MAVKWAKNLP F++LPFRDQVI AIQWSLPL +S PL E AA
Sbjct: 230 MAVKWAKNLPVFSSLPFRDQVILLEEAWSELFLLGAIQWSLPL-DSCPLLAPPEASAAGG 288
Query: 60 PNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
G+ + + + RVL + RFR + VDP EFAC+KA+VLFK ETRGLKD VE LQDQ
Sbjct: 289 AQGRLTLASMETRVLQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQ 348
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMY 179
+QVML+QH + HHP+QP RFG+LLL+ R I + R++ +FF KT+ NT MEKLLCDM+
Sbjct: 349 SQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFITAERIELLFFRKTIGNTPMEKLLCDMF 408
Query: 180 KN 181
KN
Sbjct: 409 KN 410
>UNIPROTKB|F1ML62 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045872 "positive regulation of rhodopsin gene expression"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 UniGene:Bt.241 CTD:10002
KO:K08546 OMA:MLSQHTK GO:GO:0045872 EMBL:DAAA02027989
IPI:IPI01028398 RefSeq:NP_001161372.1 Ensembl:ENSBTAT00000018926
GeneID:281944 KEGG:bta:281944 NextBio:20805821 Uniprot:F1ML62
Length = 411
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 102/182 (56%), Positives = 124/182 (68%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
MAVKWAKNLP F+ LPFRDQVI AIQWSLPL ++ PL E A
Sbjct: 231 MAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLGAIQWSLPL-DNCPLLALPEASAGGS 289
Query: 61 N-GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
+ G+ +A+ R+L + RFR + VDP EFAC+KA+VLFK ETRGLKD VE LQDQ
Sbjct: 290 SQGRLVLASAETRILQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQ 349
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMY 179
+QVML+QH + HHP+QP RFG+LLL+ R I S RV+ +FF KT+ NT MEKLLCDM+
Sbjct: 350 SQVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFISSERVELLFFRKTIGNTPMEKLLCDMF 409
Query: 180 KN 181
KN
Sbjct: 410 KN 411
>MGI|MGI:1346317 [details] [associations]
symbol:Nr2e3 "nuclear receptor subfamily 2, group E, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive
regulation of rhodopsin gene expression" evidence=IGI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346317 GO:GO:0008285
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0030522
GO:GO:0042462 HOGENOM:HOG000260820 HOVERGEN:HBG005606
eggNOG:NOG277339 OrthoDB:EOG41C6WF CTD:10002 KO:K08546
EMBL:AF148129 EMBL:AF204053 EMBL:BC017521 IPI:IPI00135703
RefSeq:NP_038736.1 UniGene:Mm.103641 ProteinModelPortal:Q9QXZ7
SMR:Q9QXZ7 STRING:Q9QXZ7 PhosphoSite:Q9QXZ7 PRIDE:Q9QXZ7
Ensembl:ENSMUST00000034831 GeneID:23958 KEGG:mmu:23958
InParanoid:Q9QXZ7 OMA:MLSQHTK NextBio:303796 Bgee:Q9QXZ7
CleanEx:MM_NR2E3 Genevestigator:Q9QXZ7
GermOnline:ENSMUSG00000032292 GO:GO:0045872 Uniprot:Q9QXZ7
Length = 395
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 100/181 (55%), Positives = 123/181 (67%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
MAVKWAKNLP F+ LPFRDQVI AIQWSLPL +S PL A +
Sbjct: 217 MAVKWAKNLPVFSNLPFRDQVILLEEAWNELFLLGAIQWSLPL-DSCPLL-APPEASGSS 274
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
G+ + +A+ R L + RFR + VDP EFACLKA+VLFK ETRGLKD VE LQDQ+
Sbjct: 275 QGRLALASAETRFLQETISRFRALAVDPTEFACLKALVLFKPETRGLKDPEHVEALQDQS 334
Query: 121 QVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
QVML+QH + HHP+QP RFG+LLL+ R + + R++ +FF KT+ NT MEKLLCDM+K
Sbjct: 335 QVMLSQHSKAHHPSQPVRFGKLLLLLPSLRFLTAERIELLFFRKTIGNTPMEKLLCDMFK 394
Query: 181 N 181
N
Sbjct: 395 N 395
>FB|FBgn0034012 [details] [associations]
symbol:Hr51 "Hormone receptor 51" species:7227 "Drosophila
melanogaster" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003707 "steroid
hormone receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0020037 "heme binding" evidence=IDA]
[GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP]
[GO:0016319 "mushroom body development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0020037 GO:GO:0016319 GO:GO:0048526
eggNOG:NOG277339 KO:K08546 OMA:MLSQHTK EMBL:BT122090
RefSeq:NP_611032.2 UniGene:Dm.16048 SMR:A1ZA01 STRING:A1ZA01
EnsemblMetazoa:FBtr0114456 GeneID:36702 KEGG:dme:Dmel_CG16801
CTD:36702 FlyBase:FBgn0034012 InParanoid:A1ZA01 OrthoDB:EOG4NCJVD
GenomeRNAi:36702 NextBio:799957 Uniprot:A1ZA01
Length = 582
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 104/189 (55%), Positives = 126/189 (66%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESS-PLFNASEHVAAV 59
MAVKWAKNLPSFA L FRDQVI NAIQW +PL + LF+ +EH +
Sbjct: 394 MAVKWAKNLPSFARLSFRDQVILLEESWSELFLLNAIQWCIPLDPTGCALFSVAEHCNNL 453
Query: 60 PNGKASQT-------AADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQ 112
N T AADVR L+ + +++ V VDPAEFACLKA+VLF+ ETRGLKD Q
Sbjct: 454 ENNANGDTCITKEELAADVRTLHEIFCKYKAVLVDPAEFACLKAIVLFRPETRGLKDPAQ 513
Query: 113 VENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSME 172
+ENLQDQA VML+QH +T AQ ARFGRLLLM R I S +++ I+F +T+ NT ME
Sbjct: 514 IENLQDQAHVMLSQHTKTQFTAQIARFGRLLLMLPLLRMISSHKIESIYFQRTIGNTPME 573
Query: 173 KLLCDMYKN 181
K+LCDMYKN
Sbjct: 574 KVLCDMYKN 582
>UNIPROTKB|Q9TTF0 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820 HSSP:P19793
eggNOG:NOG277339 EMBL:AF107729 IPI:IPI00954760 UniGene:Bt.241
STRING:Q9TTF0 InParanoid:Q9TTF0 OrthoDB:EOG41C6WF Uniprot:Q9TTF0
Length = 411
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 101/182 (55%), Positives = 123/182 (67%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
MAVKWAKNLP F+ LPFRDQVI AIQWSLPL ++ PL E A
Sbjct: 231 MAVKWAKNLPVFSNLPFRDQVILLEEAWSELFLLGAIQWSLPL-DNCPLLALPEASAGGS 289
Query: 61 N-GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
+ G+ +A+ R+L + RFR + VDP EFAC+KA+VLFK ETRGLKD VE LQDQ
Sbjct: 290 SQGRLVLASAETRILQETISRFRALAVDPTEFACMKALVLFKPETRGLKDPEHVEALQDQ 349
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMY 179
+QVML+QH + HHP+Q RFG+LLL+ R I S RV+ +FF KT+ NT MEKLLCDM+
Sbjct: 350 SQVMLSQHSKAHHPSQLVRFGKLLLLLPSLRFISSERVELLFFRKTIGNTPMEKLLCDMF 409
Query: 180 KN 181
KN
Sbjct: 410 KN 411
>ZFIN|ZDB-GENE-040801-127 [details] [associations]
symbol:nr2e1 "nuclear receptor subfamily 2, group
E, member 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040801-127 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GeneTree:ENSGT00700000104390 eggNOG:NOG277339
KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q OMA:ILLEDAW EMBL:CU138515
EMBL:BC077146 EMBL:EF010862 IPI:IPI00504614 RefSeq:NP_001003608.1
UniGene:Dr.78647 STRING:Q6DEH0 Ensembl:ENSDART00000026635
GeneID:445214 KEGG:dre:445214 NextBio:20831976 Uniprot:Q6DEH0
Length = 396
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 63/188 (33%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ LP DQ+I QW++P+ S+ L + +
Sbjct: 206 MSIKWAKSVPAFSTLPLPDQLILLEDAWRELFVLGIAQWAIPVDSSTLLAVSGMNTENTD 265
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ + ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 266 SQRLNKIISEIQALQEVVTRFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNASAI 325
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R++ + ++ +FF KT+ N + +
Sbjct: 326 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSVGPSTIEEVFFKKTIGNVPITR 385
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 386 LLSDMYKS 393
>MGI|MGI:1100526 [details] [associations]
symbol:Nr2e1 "nuclear receptor subfamily 2, group E, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA;IMP]
[GO:0001662 "behavioral fear response" evidence=IMP] [GO:0002118
"aggressive behavior" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007420 "brain development" evidence=IMP]
[GO:0007601 "visual perception" evidence=IMP] [GO:0007610
"behavior" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021542 "dentate gyrus development" evidence=IMP] [GO:0021764
"amygdala development" evidence=IMP] [GO:0021772 "olfactory bulb
development" evidence=IMP] [GO:0021819 "layer formation in cerebral
cortex" evidence=IMP] [GO:0021872 "forebrain generation of neurons"
evidence=IMP] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IMP] [GO:0021960 "anterior commissure morphogenesis"
evidence=IMP] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IGI] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IMP] [GO:0045766 "positive
regulation of angiogenesis" evidence=IMP] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IMP] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IMP] [GO:0051128 "regulation of cellular component
organization" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0060164 "regulation of timing of
neuron differentiation" evidence=IMP] [GO:0060291 "long-term
synaptic potentiation" evidence=IMP] [GO:0090049 "regulation of
cell migration involved in sprouting angiogenesis" evidence=IMP]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IMP] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1100526 GO:GO:0005634
GO:GO:0043066 GO:GO:0046872 GO:GO:0003677 GO:GO:0060291
GO:GO:0007601 GO:GO:0001078 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030198 GO:GO:0045665 GO:GO:0045766 GO:GO:0001077
GO:GO:0048814 GO:GO:0060041 GO:GO:0035176 GO:GO:0035019
GO:GO:0001662 GO:GO:0045165 GO:GO:0008347 GO:GO:0045787
GO:GO:2000179 GO:GO:0048712 GO:GO:0021960 GO:GO:0021542
GO:GO:2000178 GO:GO:0002118 GO:GO:0021772 GO:GO:0021819
HOGENOM:HOG000260820 HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895
GO:GO:0060164 eggNOG:NOG277339 KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 EMBL:S77482 EMBL:BC057104
IPI:IPI00131076 RefSeq:NP_689415.1 UniGene:Mm.287100
ProteinModelPortal:Q64104 SMR:Q64104 DIP:DIP-46432N STRING:Q64104
PhosphoSite:Q64104 PRIDE:Q64104 Ensembl:ENSMUST00000019938
GeneID:21907 KEGG:mmu:21907 InParanoid:Q64104 OMA:ILLEDAW
NextBio:301450 Bgee:Q64104 CleanEx:MM_NR2E1 Genevestigator:Q64104
GermOnline:ENSMUSG00000019803 Uniprot:Q64104
Length = 385
Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 195 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNTDNTD 254
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 255 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 314
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 315 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 374
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 375 LLSDMYKS 382
>UNIPROTKB|Q91379 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 KO:K08545 EMBL:S72373
IPI:IPI00600540 PIR:S48074 RefSeq:NP_990501.1 UniGene:Gga.3535
ProteinModelPortal:Q91379 PRIDE:Q91379 GeneID:396082
KEGG:gga:396082 CTD:7101 NextBio:20816140 Uniprot:Q91379
Length = 385
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 195 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 254
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 255 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 314
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 315 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 374
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 375 LLSDMYKS 382
>UNIPROTKB|F1MN68 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 GO:GO:0021764
GO:GO:0021872 GO:GO:0090049 OMA:ILLEDAW EMBL:DAAA02025945
IPI:IPI00823513 RefSeq:NP_001179582.1 UniGene:Bt.85086 PRIDE:F1MN68
Ensembl:ENSBTAT00000018594 GeneID:528156 KEGG:bta:528156
NextBio:20874755 Uniprot:F1MN68
Length = 385
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 195 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 254
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 255 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 314
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 315 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 374
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 375 LLSDMYKS 382
>UNIPROTKB|F1PD89 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:AAEX03008592
RefSeq:XP_532253.2 ProteinModelPortal:F1PD89
Ensembl:ENSCAFT00000006050 GeneID:475017 KEGG:cfa:475017
Uniprot:F1PD89
Length = 385
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 195 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 254
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 255 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 314
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 315 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 374
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 375 LLSDMYKS 382
>UNIPROTKB|F1Q176 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:AAEX03008592
Ensembl:ENSCAFT00000035327 Uniprot:F1Q176
Length = 412
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 225 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 284
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 285 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 344
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 345 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 404
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 405 LLSDMYKS 412
>UNIPROTKB|Q6ZMP8 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2, group E, member
1, isoform CRA_b" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 EMBL:CH471051 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:AL078596 UniGene:Hs.157688 HGNC:HGNC:7973
OMA:ILLEDAW HSSP:P20393 EMBL:AK131541 IPI:IPI00000354 SMR:Q6ZMP8
STRING:Q6ZMP8 Ensembl:ENST00000368983 Uniprot:Q6ZMP8
Length = 422
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 232 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 291
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 292 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 351
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 352 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 411
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 412 LLSDMYKS 419
>UNIPROTKB|Q9Y466 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021772 "olfactory bulb
development" evidence=IEA] [GO:0021819 "layer formation in cerebral
cortex" evidence=IEA] [GO:0021872 "forebrain generation of neurons"
evidence=IEA] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IEA] [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0060164 "regulation of timing of neuron
differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:0090049 "regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0043066 GO:GO:0007399 GO:GO:0005654
GO:GO:0046872 GO:GO:0060291 GO:GO:0007601 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665
GO:GO:0045766 GO:GO:0001077 GO:GO:0048814 GO:GO:0060041
GO:GO:0035176 GO:GO:0035019 GO:GO:0001662 GO:GO:0006367
GO:GO:0045165 GO:GO:0008347 GO:GO:0045787 GO:GO:2000179
GO:GO:0048712 GO:GO:0021960 GO:GO:0021542 GO:GO:2000178
GO:GO:0002118 GO:GO:0021772 GO:GO:0021819 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
eggNOG:NOG277339 KO:K08545 CTD:7101 EMBL:Y13276 EMBL:AF220532
EMBL:AF411525 EMBL:AL078596 EMBL:BC028031 IPI:IPI00843777
RefSeq:NP_003260.1 UniGene:Hs.157688 ProteinModelPortal:Q9Y466
SMR:Q9Y466 STRING:Q9Y466 PhosphoSite:Q9Y466 DMDM:9910804
PRIDE:Q9Y466 DNASU:7101 Ensembl:ENST00000368986 GeneID:7101
KEGG:hsa:7101 UCSC:uc003psg.3 GeneCards:GC06P108487 HGNC:HGNC:7973
HPA:HPA036954 MIM:603849 neXtProt:NX_Q9Y466 PharmGKB:PA31756
OrthoDB:EOG4ZCT4Q PhylomeDB:Q9Y466 ChEMBL:CHEMBL1961788
GenomeRNAi:7101 NextBio:27781 ArrayExpress:Q9Y466 Bgee:Q9Y466
CleanEx:HS_NR2E1 Genevestigator:Q9Y466 GermOnline:ENSG00000112333
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 Uniprot:Q9Y466
Length = 385
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 195 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 254
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 255 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 314
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 315 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 374
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 375 LLSDMYKS 382
>UNIPROTKB|F1RT26 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:CU469092 Ensembl:ENSSSCT00000004846
Uniprot:F1RT26
Length = 421
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 231 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 290
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 291 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 350
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 351 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 410
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 411 LLSDMYKS 418
>UNIPROTKB|I3LU21 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:CU469092
RefSeq:XP_003353327.1 ProteinModelPortal:I3LU21
Ensembl:ENSSSCT00000022342 GeneID:100155153 KEGG:ssc:100155153
Uniprot:I3LU21
Length = 385
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 62/188 (32%), Positives = 109/188 (57%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
M++KWAK++P+F+ L +DQ++ QW++P+ ++ L + +
Sbjct: 195 MSIKWAKSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTD 254
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQV 113
+ K ++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ +
Sbjct: 255 SQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAI 314
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
LQD+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +
Sbjct: 315 AALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITR 374
Query: 174 LLCDMYKN 181
LL DMYK+
Sbjct: 375 LLSDMYKS 382
>UNIPROTKB|A6QPQ9 [details] [associations]
symbol:NR2F1 "NR2F1 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522 UniGene:Bt.543
HOGENOM:HOG000260820 HOVERGEN:HBG005606 EMBL:DAAA02021281
EMBL:BC149438 IPI:IPI00839954 SMR:A6QPQ9 STRING:A6QPQ9
Ensembl:ENSBTAT00000043324 Uniprot:A6QPQ9
Length = 273
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/177 (35%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 80 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 139
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 140 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQ 199
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 200 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 256
>UNIPROTKB|F1N056 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 IPI:IPI00710549
OMA:DKGQGQP EMBL:DAAA02021281 Ensembl:ENSBTAT00000023401
Uniprot:F1N056
Length = 353
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/177 (35%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 160 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 219
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 220 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQ 279
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 280 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 336
>UNIPROTKB|Q9TTR8 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AJ249440 IPI:IPI00710549
PIR:JH0786 RefSeq:NP_786998.1 UniGene:Bt.543
ProteinModelPortal:Q9TTR8 SMR:Q9TTR8 STRING:Q9TTR8 GeneID:327684
KEGG:bta:327684 CTD:7025 HOGENOM:HOG000260820 HOVERGEN:HBG005606
InParanoid:Q9TTR8 KO:K08547 OrthoDB:EOG4MGS7H NextBio:20810149
Uniprot:Q9TTR8
Length = 424
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/177 (35%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 231 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 290
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 291 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQ 350
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 351 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 407
>UNIPROTKB|P10589 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0001764
GO:GO:0005654 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900 GO:GO:0000122
GO:GO:0003713 GO:GO:0006367 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H EMBL:X16155
EMBL:X12795 EMBL:BC004154 EMBL:BC017493 IPI:IPI00021431 PIR:S02710
RefSeq:NP_005645.1 UniGene:Hs.519445 PDB:2EBL PDBsum:2EBL
ProteinModelPortal:P10589 SMR:P10589 DIP:DIP-622N STRING:P10589
PhosphoSite:P10589 DMDM:116959 PaxDb:P10589 PRIDE:P10589 DNASU:7025
Ensembl:ENST00000327111 GeneID:7025 KEGG:hsa:7025 UCSC:uc003kkj.3
GeneCards:GC05P092920 HGNC:HGNC:7975 HPA:CAB019281 MIM:132890
neXtProt:NX_P10589 PharmGKB:PA31758 InParanoid:P10589 OMA:DKGQGQP
PhylomeDB:P10589 ChEMBL:CHEMBL1961789 ChiTaRS:NR2F1
EvolutionaryTrace:P10589 GenomeRNAi:7025 NextBio:27447 Bgee:P10589
CleanEx:HS_NR2F1 Genevestigator:P10589 GermOnline:ENSG00000175745
Uniprot:P10589
Length = 423
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/177 (35%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 230 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 289
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 290 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQ 349
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 350 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 406
>UNIPROTKB|F1RNX7 [details] [associations]
symbol:NR2F1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 KO:K08547 OMA:DKGQGQP EMBL:CU463069
RefSeq:XP_003354261.1 Ensembl:ENSSSCT00000015465 GeneID:100621341
KEGG:ssc:100621341 Uniprot:F1RNX7
Length = 422
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/177 (35%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 229 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 288
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 289 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQ 348
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 349 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 405
>MGI|MGI:1352451 [details] [associations]
symbol:Nr2f1 "nuclear receptor subfamily 2, group F, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IDA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352451
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 ChiTaRS:NR2F1 EMBL:U07625 EMBL:X74134
IPI:IPI00119059 PIR:I48305 RefSeq:NP_034281.2 UniGene:Mm.439653
ProteinModelPortal:Q60632 SMR:Q60632 STRING:Q60632
PhosphoSite:Q60632 PaxDb:Q60632 PRIDE:Q60632 GeneID:13865
KEGG:mmu:13865 InParanoid:Q60632 NextBio:284760 CleanEx:MM_NR2F1
Genevestigator:Q60632 GermOnline:ENSMUSG00000069171 Uniprot:Q60632
Length = 422
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/177 (35%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 229 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 288
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 289 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQ 348
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 349 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 405
>UNIPROTKB|F2Z3S9 [details] [associations]
symbol:Nr2f1 "Protein Nr2f1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621682 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 OMA:DKGQGQP IPI:IPI00554118
ProteinModelPortal:F2Z3S9 SMR:F2Z3S9 Ensembl:ENSRNOT00000020044
Uniprot:F2Z3S9
Length = 420
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 62/177 (35%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 227 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 286
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 287 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDAAHIESLQEKSQ 346
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 347 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 403
>UNIPROTKB|F1NAB6 [details] [associations]
symbol:LOC100859519 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001937 "negative regulation of
endothelial cell proliferation" evidence=IEA] [GO:0001972 "retinoic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0009566 "fertilization" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009956 "radial pattern formation" evidence=IEA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045736 "negative
regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0060707 "trophoblast giant cell differentiation"
evidence=IEA] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01282
SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0001937 GO:GO:0045736 GO:GO:0010596 GO:GO:0001972
EMBL:AADN02039138 EMBL:AADN02039139 EMBL:AADN02039140
IPI:IPI00577253 Ensembl:ENSGALT00000023630 OMA:CINNIAL
ArrayExpress:F1NAB6 Uniprot:F1NAB6
Length = 281
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 90 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 149
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 150 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 209
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 210 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 266
>UNIPROTKB|F1NGT1 [details] [associations]
symbol:LOC100859519 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001937 "negative regulation of
endothelial cell proliferation" evidence=IEA] [GO:0001972 "retinoic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA]
[GO:0009566 "fertilization" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0009956 "radial pattern formation" evidence=IEA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045736 "negative
regulation of cyclin-dependent protein serine/threonine kinase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0060707 "trophoblast giant cell differentiation"
evidence=IEA] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01282
SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0001937 GO:GO:0045736 GO:GO:0010596 GO:GO:0001972
IPI:IPI00598209 EMBL:AADN02039138 EMBL:AADN02039139
EMBL:AADN02039140 Ensembl:ENSGALT00000011332 ArrayExpress:F1NGT1
Uniprot:F1NGT1
Length = 267
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 76 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 135
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 136 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 195
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 196 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 252
>UNIPROTKB|F1NJL8 [details] [associations]
symbol:LOC100859519 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522 EMBL:AADN02039138
EMBL:AADN02039139 EMBL:AADN02039140 IPI:IPI00683443
Ensembl:ENSGALT00000033927 ArrayExpress:F1NJL8 Uniprot:F1NJL8
Length = 269
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 78 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 137
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 138 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 197
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 198 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 254
>UNIPROTKB|Q90733 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISS] [GO:0001972
"retinoic acid binding" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548
GO:GO:0001972 EMBL:U00697 IPI:IPI00598209 PIR:I50689
RefSeq:NP_989752.1 UniGene:Gga.4445 ProteinModelPortal:Q90733
SMR:Q90733 STRING:Q90733 GeneID:386585 KEGG:gga:386585
InParanoid:Q90733 NextBio:20813947 Uniprot:Q90733
Length = 410
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 219 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 278
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 279 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 338
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 339 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 395
>UNIPROTKB|A4IFS2 [details] [associations]
symbol:NR2F2 "NR2F2 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 UniGene:Bt.53763
EMBL:DAAA02051822 EMBL:DAAA02051823 EMBL:BC134735 IPI:IPI00908251
STRING:A4IFS2 Ensembl:ENSBTAT00000056488 Uniprot:A4IFS2
Length = 281
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 90 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 149
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 150 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 209
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 210 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 266
>UNIPROTKB|Q9TTR7 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9913
"Bos taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0001972 "retinoic acid binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0060849
"regulation of transcription involved in lymphatic endothelial cell
fate commitment" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
evidence=IEA] [GO:0045736 "negative regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0001937 "negative regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
OrthoDB:EOG4MGS7H EMBL:AJ249441 EMBL:BC123677 IPI:IPI00695873
PIR:JH0787 RefSeq:NP_776827.1 UniGene:Bt.53763
ProteinModelPortal:Q9TTR7 SMR:Q9TTR7 STRING:Q9TTR7
Ensembl:ENSBTAT00000023969 GeneID:281945 KEGG:bta:281945 CTD:7026
InParanoid:Q9TTR7 KO:K08548 OMA:GPPNNTQ NextBio:20805822
ArrayExpress:Q9TTR7 GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
Uniprot:Q9TTR7
Length = 414
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 223 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 283 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 343 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 399
>UNIPROTKB|F1PX81 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 OMA:GPPNNTQ
EMBL:AAEX03002267 Ensembl:ENSCAFT00000017350 Uniprot:F1PX81
Length = 420
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 229 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 288
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 289 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 348
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 349 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 405
>UNIPROTKB|P24468 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001893 "maternal
placenta development" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009956 "radial pattern formation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0032355 "response to estradiol stimulus" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0001972 "retinoic acid
binding" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IC;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0006629 "lipid metabolic process"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IMP]
[GO:0001937 "negative regulation of endothelial cell proliferation"
evidence=IMP] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA;TAS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0001764
Pathway_Interaction_DB:telomerasepathway GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0048514 GO:GO:0006629
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 EMBL:CH471101
GO:GO:0060173 GO:GO:0045736 GO:GO:0010596 GO:GO:0007519
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
UniGene:Hs.519445 CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972
GO:GO:0009956 GO:GO:0060849 EMBL:M64497 EMBL:U60477 EMBL:AB307711
EMBL:FM208183 EMBL:AK298824 EMBL:AK301595 EMBL:AK316086
EMBL:HQ692849 EMBL:HQ692850 EMBL:AC016251 EMBL:BC014664
EMBL:BC042897 EMBL:BC106083 EMBL:M62760 IPI:IPI00028611
IPI:IPI00789037 PIR:A37133 RefSeq:NP_001138627.1
RefSeq:NP_001138628.1 RefSeq:NP_001138629.1 RefSeq:NP_066285.1
UniGene:Hs.347991 PDB:3CJW PDBsum:3CJW ProteinModelPortal:P24468
SMR:P24468 DIP:DIP-29713N IntAct:P24468 MINT:MINT-1183332
STRING:P24468 PhosphoSite:P24468 DMDM:114203 PRIDE:P24468
Ensembl:ENST00000394166 Ensembl:ENST00000394171
Ensembl:ENST00000421109 Ensembl:ENST00000453270 GeneID:7026
KEGG:hsa:7026 UCSC:uc010uri.2 GeneCards:GC15P096869 HGNC:HGNC:7976
MIM:107773 neXtProt:NX_P24468 PharmGKB:PA31759 InParanoid:P24468
PhylomeDB:P24468 ChEMBL:CHEMBL1961790 EvolutionaryTrace:P24468
GenomeRNAi:7026 NextBio:27451 ArrayExpress:P24468 Bgee:P24468
CleanEx:HS_NR2F2 Genevestigator:P24468 GermOnline:ENSG00000185551
Uniprot:P24468
Length = 414
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 223 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 283 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 343 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 399
>UNIPROTKB|B5A7P0 [details] [associations]
symbol:Nr2f2 "Orphan nuclear receptor COUP-TFII"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01282 SMART:SM00430
GO:GO:0005634 GO:GO:0003677 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026
KO:K08548 EMBL:CU407120 EMBL:EU822301 RefSeq:NP_001177181.1
RefSeq:NP_001177182.1 UniGene:Ssc.8676 ProteinModelPortal:B5A7P0
SMR:B5A7P0 PRIDE:B5A7P0 Ensembl:ENSSSCT00000002510 GeneID:100153983
KEGG:ssc:100153983 Uniprot:B5A7P0
Length = 281
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 90 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 149
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 150 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 209
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 210 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 266
>UNIPROTKB|F1SCJ6 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0009952 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 CTD:7026 KO:K08548
OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:CU407120
RefSeq:NP_001177181.1 UniGene:Ssc.8676 GeneID:100153983
KEGG:ssc:100153983 Ensembl:ENSSSCT00000002511 Uniprot:F1SCJ6
Length = 414
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 223 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 283 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 343 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 399
>MGI|MGI:1352452 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0001893 "maternal
placenta development" evidence=IMP] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=ISO]
[GO:0001972 "retinoic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0060173
"limb development" evidence=IMP] [GO:0060674 "placenta blood vessel
development" evidence=IMP] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0060849 "regulation of
transcription involved in lymphatic endothelial cell fate
commitment" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352452 GO:GO:0005634
GO:GO:0001764 GO:GO:0045893 GO:GO:0032355 GO:GO:0009952
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0009566
GO:GO:0000122 GO:GO:0001937 GO:GO:0001893 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548 OMA:GPPNNTQ
GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:X76653 EMBL:U07635
EMBL:BC042484 IPI:IPI00117234 RefSeq:NP_033827.2 UniGene:Mm.158143
ProteinModelPortal:P43135 SMR:P43135 STRING:P43135
PhosphoSite:P43135 PaxDb:P43135 PRIDE:P43135
Ensembl:ENSMUST00000032768 GeneID:11819 KEGG:mmu:11819
InParanoid:P43135 NextBio:279711 Bgee:P43135 CleanEx:MM_NR2F2
Genevestigator:P43135 GermOnline:ENSMUSG00000030551 GO:GO:0001945
GO:GO:0060674 GO:GO:0060707 Uniprot:P43135
Length = 414
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 223 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 283 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 343 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 399
>RGD|69305 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0001893
"maternal placenta development" evidence=IEA;ISO] [GO:0001937
"negative regulation of endothelial cell proliferation"
evidence=IEA;ISO] [GO:0001972 "retinoic acid binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0009956 "radial pattern
formation" evidence=IEA;ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045736
"negative regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] [GO:0060674
"placenta blood vessel development" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0060849 "regulation of transcription involved in lymphatic
endothelial cell fate commitment" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:7026
KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1 UniGene:Rn.17815
ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 223 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 283 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 343 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 399
>UNIPROTKB|O09018 [details] [associations]
symbol:Nr2f2 "COUP transcription factor 2" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0032355 GO:GO:0009952 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900
GO:GO:0000122 GO:GO:0001937 GO:GO:0060173 GO:GO:0045736
GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956
GO:GO:0060849 EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1
UniGene:Rn.17815 ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 223 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 283 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 343 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 399
>ZFIN|ZDB-GENE-980526-115 [details] [associations]
symbol:nr2f1a "nuclear receptor subfamily 2, group
F, member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-115 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H
OMA:DKGQGQP EMBL:X70299 EMBL:CR751602 EMBL:BC056574 EMBL:BC066671
EMBL:U93463 IPI:IPI00499015 IPI:IPI00923775 IPI:IPI00923787
PIR:S35333 RefSeq:NP_571255.1 UniGene:Dr.16
ProteinModelPortal:Q06725 SMR:Q06725 Ensembl:ENSDART00000051263
Ensembl:ENSDART00000133384 GeneID:30418 KEGG:dre:30418 CTD:30418
InParanoid:O42536 NextBio:20806824 ArrayExpress:Q06725 Bgee:Q06725
Uniprot:Q06725
Length = 411
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 61/177 (34%), Positives = 101/177 (57%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 220 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 279
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++C+KA+VLF S+ GL D+ +E+LQ+++Q
Sbjct: 280 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCIKAIVLFTSDACGLSDAAHIESLQEKSQ 339
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP+RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 340 CALEEYVRSQYPNQPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 396
>ZFIN|ZDB-GENE-990415-252 [details] [associations]
symbol:nr2f2 "nuclear receptor subfamily 2, group
F, member 2" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0060838 "lymphatic endothelial
cell fate commitment" evidence=IMP] [GO:0001946 "lymphangiogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-252 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001946 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
OMA:GPPNNTQ EMBL:BX569787 EMBL:BX936364 EMBL:BC162484
IPI:IPI00508689 UniGene:Dr.77152 STRING:B3DGQ7
Ensembl:ENSDART00000059976 GO:GO:0060838 Uniprot:B3DGQ7
Length = 428
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 63/177 (35%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 237 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 296
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 297 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 356
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 357 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 413
>FB|FBgn0015381 [details] [associations]
symbol:dsf "dissatisfaction" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;TAS] [GO:0018993
"somatic sex determination" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0007530 "sex determination" evidence=TAS]
[GO:0007619 "courtship behavior" evidence=NAS;TAS] [GO:0007617
"mating behavior" evidence=NAS] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA;NAS] [GO:0007620 "copulation"
evidence=NAS] [GO:0018991 "oviposition" evidence=NAS;TAS]
[GO:0045924 "regulation of female receptivity" evidence=NAS]
[GO:0008049 "male courtship behavior" evidence=TAS] [GO:0001078
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0048047 "mating
behavior, sex discrimination" evidence=TAS] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035206 "regulation of hemocyte
proliferation" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0018991
GO:GO:0046872 GO:GO:0004879 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045924 GO:GO:0008049 GO:GO:0035206
GO:GO:0048047 GO:GO:0007620 GO:GO:0018993 HSSP:P19793 EMBL:AF106677
ProteinModelPortal:O96680 SMR:O96680 STRING:O96680 PRIDE:O96680
FlyBase:FBgn0015381 eggNOG:NOG242640 InParanoid:O96680
OrthoDB:EOG4MW6NV ArrayExpress:O96680 Bgee:O96680 Uniprot:O96680
Length = 693
Score = 308 (113.5 bits), Expect = 1.4e-26, P = 1.4e-26
Identities = 69/179 (38%), Positives = 100/179 (55%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
MAV+W K L F L DQ + N QW++PL + +P+ + V
Sbjct: 509 MAVRWVKCLMPFQTLSKNDQHLLLQESWKELFLLNLAQWTIPL-DLTPILESPLIRERVL 567
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+A+QT +++ + +L RFR + D +E C+KA+ LF ET GL D VE LQDQA
Sbjct: 568 QDEATQT--EMKTIQEILCRFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQA 625
Query: 121 QVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMY 179
Q +L+ HVR +P Q RFGRLLL+ R I +A ++ +FF +T+ N + +LL DMY
Sbjct: 626 QCILSDHVRLRYPRQATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDMY 684
>UNIPROTKB|F1N3S3 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:DAAA02019082 IPI:IPI00705246 RefSeq:XP_002688591.2
RefSeq:XP_002704762.2 Ensembl:ENSBTAT00000014791 GeneID:100296331
KEGG:bta:100296331 Uniprot:F1N3S3
Length = 412
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 67/177 (37%), Positives = 97/177 (54%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
V+WA++ P F LP DQV NA Q +LPL ++PL A+ H A +
Sbjct: 222 VEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPL-HTAPLLAAAGLHAAPMAA 280
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+A VR + + + VD AE+ CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 281 ERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQ 340
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++VR +P+QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 341 VALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 397
>UNIPROTKB|E2R3D0 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:AAEX03012299 EMBL:AAEX03012298 RefSeq:XP_852412.1
Ensembl:ENSCAFT00000024566 GeneID:609720 KEGG:cfa:609720
NextBio:20895307 Uniprot:E2R3D0
Length = 416
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 67/177 (37%), Positives = 97/177 (54%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
V+WA++ P F LP DQV NA Q +LPL ++PL A+ H A +
Sbjct: 226 VEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPL-HTAPLLAAAGLHAAPMAA 284
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+A VR + + + VD AE+ CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 285 ERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQ 344
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++VR +P+QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 345 VALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 401
>UNIPROTKB|P10588 [details] [associations]
symbol:NR2F6 "Nuclear receptor subfamily 2 group F member
6" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEA] [GO:0048666 "neuron development"
evidence=IEA] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0004887 "thyroid hormone
receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 EMBL:CH471106 GO:GO:0006367
GO:GO:0043153 GO:GO:0004887 HOGENOM:HOG000260820 HOVERGEN:HBG005606
EMBL:X12794 EMBL:AK314961 EMBL:BC002669 EMBL:BC063018 EMBL:BC084544
IPI:IPI00021429 PIR:S02709 RefSeq:NP_005225.2 UniGene:Hs.466148
ProteinModelPortal:P10588 SMR:P10588 IntAct:P10588 STRING:P10588
PhosphoSite:P10588 DMDM:23503053 PRIDE:P10588
Ensembl:ENST00000291442 GeneID:2063 KEGG:hsa:2063 UCSC:uc002nfq.3
CTD:2063 GeneCards:GC19M017342 HGNC:HGNC:7977 MIM:132880
neXtProt:NX_P10588 PharmGKB:PA31760 eggNOG:NOG277317
InParanoid:P10588 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
PhylomeDB:P10588 ChEMBL:CHEMBL1961791 GenomeRNAi:2063 NextBio:8381
ArrayExpress:P10588 Bgee:P10588 CleanEx:HS_NR2F6
Genevestigator:P10588 GermOnline:ENSG00000160113 Uniprot:P10588
Length = 404
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 67/177 (37%), Positives = 97/177 (54%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
V+WA++ P F LP DQV NA Q +LPL ++PL A+ H A +
Sbjct: 214 VEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPL-HTAPLLAAAGLHAAPMAA 272
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+A VR + + + VD AE+ CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 273 ERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQ 332
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++VR +P+QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 333 VALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 389
>UNIPROTKB|F1S962 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:CU914416 RefSeq:XP_003123537.1 UniGene:Ssc.1893
Ensembl:ENSSSCT00000015156 GeneID:100516724 KEGG:ssc:100516724
Uniprot:F1S962
Length = 414
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 67/177 (37%), Positives = 97/177 (54%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
V+WA++ P F LP DQV NA Q +LPL ++PL A+ H A +
Sbjct: 224 VEWARHAPFFPELPVADQVALLRLSWSELFVLNAAQAALPL-HTAPLLAAAGLHAAPMAA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+A VR + + + VD AE+ CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 283 ERAVAFMDQVRAFQEQVDKLGRLQVDSAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++VR +P+QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 343 VALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 399
>MGI|MGI:1352453 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member
6" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0050965 "detection of temperature stimulus involved in sensory
perception of pain" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352453
GO:GO:0005634 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 EMBL:CH466569
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 HSSP:P03372
CTD:2063 eggNOG:NOG277317 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
EMBL:X76654 EMBL:L25674 EMBL:AK131941 EMBL:AK171552 EMBL:BC008138
IPI:IPI00117237 PIR:I48734 PIR:I49640 RefSeq:NP_034280.2
UniGene:Mm.28989 ProteinModelPortal:P43136 SMR:P43136 IntAct:P43136
STRING:P43136 PhosphoSite:P43136 PaxDb:P43136 PRIDE:P43136
Ensembl:ENSMUST00000002466 GeneID:13864 KEGG:mmu:13864
InParanoid:Q922G8 NextBio:284756 Bgee:P43136 CleanEx:MM_NR2F6
Genevestigator:P43136 GermOnline:ENSMUSG00000002393 Uniprot:P43136
Length = 390
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 67/177 (37%), Positives = 97/177 (54%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
V+WA++ P F LP DQV NA Q +LPL ++PL A+ H A +
Sbjct: 201 VEWARHAPFFPELPAADQVALLRLSWSELFVLNAAQAALPL-HTAPLLAAAGLHAAPMAA 259
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+A VR + + + VD AE+ CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 260 ERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQ 319
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++VR +P+QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 320 VALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 376
>ZFIN|ZDB-GENE-990415-253 [details] [associations]
symbol:nr2f5 "nuclear receptor subfamily 2, group
F, member 5" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-253 GO:GO:0005634
GO:GO:0046872 GO:GO:0007601 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:X70300 IPI:IPI00492421 PIR:S35334
RefSeq:NP_571261.1 UniGene:Dr.22 ProteinModelPortal:Q06726
SMR:Q06726 STRING:Q06726 Ensembl:ENSDART00000040769 GeneID:30427
KEGG:dre:30427 CTD:30427 InParanoid:Q06726 KO:K08702 OMA:HYNENGP
OrthoDB:EOG4JHCFP NextBio:20806829 ArrayExpress:Q06726 Bgee:Q06726
Uniprot:Q06726
Length = 403
Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 65/177 (36%), Positives = 97/177 (54%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WAKN+P F L DQV NA Q S+PL + L A H + +
Sbjct: 198 AVEWAKNIPFFPDLQLMDQVALLRMSWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 257
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +RV +++ + + VD AE++CLK++VLF S+ GL D VE++Q+++Q
Sbjct: 258 ERVVAFMDHIRVFQEQVEKLKALQVDTAEYSCLKSIVLFTSDAMGLSDVAHVESIQEKSQ 317
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR +P QP RFGRLLL R + S ++ +FF + V T +E LL DM
Sbjct: 318 CALEEYVRNQYPNQPNRFGRLLLRLPSLRIVSSPVIEQLFFVRLVGKTPIETLLRDM 374
>ZFIN|ZDB-GENE-040426-2351 [details] [associations]
symbol:nr2f6b "nuclear receptor subfamily 2, group
F, member 6b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040426-2351 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 eggNOG:NOG277317 OrthoDB:EOG4FN4HT HSSP:P20393
EMBL:BX248501 EMBL:CT573239 EMBL:BC065332 IPI:IPI00503290
RefSeq:NP_998404.1 UniGene:Dr.16181 SMR:Q6P115
Ensembl:ENSDART00000027666 Ensembl:ENSDART00000123931 GeneID:406522
KEGG:dre:406522 CTD:406522 InParanoid:Q6P115 OMA:VMGIDSI
NextBio:20818095 Uniprot:Q6P115
Length = 404
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 64/177 (36%), Positives = 96/177 (54%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
++WA+N+P F LP +QV NA Q +LPL ++PL A+ H + +P
Sbjct: 214 IEWARNIPYFPDLPVSEQVALLRLSWSELFILNAAQSALPL-HTAPLLAAAGFHSSPMPA 272
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ VRV + + + VD E++CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 273 DRVVSFMDQVRVFQDQVDKLTRLQVDSVEYSCLKAIALFSPDACGLSDPAHVESLQEKAQ 332
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++ R +P QP RFGRLLL R +P+ + +FF + V T +E L+ DM
Sbjct: 333 VALTEYERMQYPGQPQRFGRLLLRLPALRAVPANLISQLFFMRLVGKTPIETLIRDM 389
>ZFIN|ZDB-GENE-030131-4362 [details] [associations]
symbol:nr2f6a "nuclear receptor subfamily 2, group
F, member 6a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-030131-4362 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08549 OMA:DPNGGTN HSSP:P20393 EMBL:CR384062
EMBL:BC065330 IPI:IPI00494205 RefSeq:NP_991120.1 UniGene:Dr.77527
SMR:Q6P117 Ensembl:ENSDART00000022379 GeneID:325637 KEGG:dre:325637
CTD:325637 InParanoid:Q6P117 NextBio:20809398 Uniprot:Q6P117
Length = 402
Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 64/177 (36%), Positives = 97/177 (54%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
++WA+N+P F LP +QV NA Q +LPL +PL A+ H + +
Sbjct: 212 IEWARNIPYFPELPVSEQVALLRLSWSELFILNAAQSALPL-HMAPLLAAAGFHSSPMSA 270
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ VRV +++ + VD AE++CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 271 ERVVSFMDQVRVFQDQVEKLTRLQVDSAEYSCLKAIALFSPDACGLTDPAHVESLQEKAQ 330
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++ R +P QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 331 VALTEYERMQYPGQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 387
>RGD|621685 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member 6"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043153 "entrainment of circadian clock by photoperiod"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;IDA] [GO:0048666 "neuron development"
evidence=IEA;ISO] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0003700
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 GO:GO:0043153
HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063 eggNOG:NOG277317
KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926 IPI:IPI00192618
RefSeq:NP_620813.1 UniGene:Rn.25840 ProteinModelPortal:O09017
SMR:O09017 STRING:O09017 PhosphoSite:O09017 GeneID:245980
KEGG:rno:245980 UCSC:RGD:621685 InParanoid:O09017 NextBio:623270
ArrayExpress:O09017 Genevestigator:O09017
GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 65/177 (36%), Positives = 95/177 (53%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
V+WA++ P F LP DQV NA Q +PL ++PL A+ H +
Sbjct: 201 VEWARHAPFFPELPAADQVGLLRLSWSELFVLNAAQAPVPL-HTAPLLAAAGLHAGPMAA 259
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+A VR + + + VD AE+ CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 260 ERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQ 319
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++VR +P+QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 320 VALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 376
>UNIPROTKB|O09017 [details] [associations]
symbol:Nr2f6 "Nuclear receptor subfamily 2 group F member
6" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0003700 GO:GO:0000122 GO:GO:0048666 GO:GO:0030522
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063
eggNOG:NOG277317 KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926
IPI:IPI00192618 RefSeq:NP_620813.1 UniGene:Rn.25840
ProteinModelPortal:O09017 SMR:O09017 STRING:O09017
PhosphoSite:O09017 GeneID:245980 KEGG:rno:245980 UCSC:RGD:621685
InParanoid:O09017 NextBio:623270 ArrayExpress:O09017
Genevestigator:O09017 GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 65/177 (36%), Positives = 95/177 (53%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASE-HVAAVPN 61
V+WA++ P F LP DQV NA Q +PL ++PL A+ H +
Sbjct: 201 VEWARHAPFFPELPAADQVGLLRLSWSELFVLNAAQAPVPL-HTAPLLAAAGLHAGPMAA 259
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+A VR + + + VD AE+ CLKA+ LF + GL D VE+LQ++AQ
Sbjct: 260 ERAVAFMDQVRAFQEQVDKLGRLQVDAAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQ 319
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
V L ++VR +P+QP RFGRLLL R +P++ + +FF + V T +E L+ DM
Sbjct: 320 VALTEYVRAQYPSQPQRFGRLLLRLPALRAVPASLISQLFFMRLVGKTPIETLIRDM 376
>ZFIN|ZDB-GENE-040426-1438 [details] [associations]
symbol:nr2f1b "nuclear receptor subfamily 2, group
F, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040426-1438 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
EMBL:BC056748 EMBL:BC065651 IPI:IPI00482303 IPI:IPI00923764
RefSeq:NP_956886.1 UniGene:Dr.86046 HSSP:P19793
ProteinModelPortal:Q6PH18 SMR:Q6PH18 Ensembl:ENSDART00000027242
GeneID:393564 KEGG:dre:393564 CTD:393564 InParanoid:Q6PH18
OMA:MENIRIF NextBio:20814585 ArrayExpress:Q6PH18 Bgee:Q6PH18
Uniprot:Q6PH18
Length = 389
Score = 282 (104.3 bits), Expect = 9.7e-25, P = 9.7e-25
Identities = 61/177 (34%), Positives = 96/177 (54%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 198 AVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQSSMPLHVAPLLAAAGLHASPMSA 257
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R +++ + + VD AE++C KA+VLF S+ GL D +E LQ+++Q
Sbjct: 258 DRVVAFMDHIRFFQEQVEKLKALQVDSAEYSCAKAIVLFTSDACGLSDIPHIEGLQEKSQ 317
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF + V T +E L+ DM
Sbjct: 318 CALEEYVRSQYPNQPTRFGKLLLRLPALRMVSSSVIEQLFFVRLVGKTPIETLIRDM 374
>UNIPROTKB|F6Y5T4 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
Ensembl:ENSCAFT00000024577 EMBL:AAEX03026796 OMA:NDQVALL
Uniprot:F6Y5T4
Length = 414
Score = 278 (102.9 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 60/177 (33%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+ +P F L DQV N Q S+P L S H + +
Sbjct: 223 AVEWARKIPFFPDLEVNDQVALLHLTWCDLFMLNWAQCSMPAQVLPFLAATSLHTSPGSS 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ + +V++L +++F+ + VDPAE++CLKA++LF + GL D++ VE+ Q+++Q
Sbjct: 283 DQVAVFTENVQMLQDQMEKFKALHVDPAEYSCLKAIILFAPDAPGLSDTVNVESWQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L Q+VR + QP RFG+LLL + R +PS+ V+ +FF V T ++ L+ D+
Sbjct: 343 CALEQYVRRQYSNQPMRFGKLLLRLTSLRAVPSSVVEQLFFVHLVGKTPIKILIRDI 399
>UNIPROTKB|E2R3A8 [details] [associations]
symbol:E2R3A8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 ProteinModelPortal:E2R3A8 Ensembl:ENSCAFT00000024577
Uniprot:E2R3A8
Length = 415
Score = 278 (102.9 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 60/177 (33%), Positives = 99/177 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+ +P F L DQV N Q S+P L S H + +
Sbjct: 224 AVEWARKIPFFPDLEVNDQVALLHLTWCDLFMLNWAQCSMPAQVLPFLAATSLHTSPGSS 283
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ + +V++L +++F+ + VDPAE++CLKA++LF + GL D++ VE+ Q+++Q
Sbjct: 284 DQVAVFTENVQMLQDQMEKFKALHVDPAEYSCLKAIILFAPDAPGLSDTVNVESWQEKSQ 343
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L Q+VR + QP RFG+LLL + R +PS+ V+ +FF V T ++ L+ D+
Sbjct: 344 CALEQYVRRQYSNQPMRFGKLLLRLTSLRAVPSSVVEQLFFVHLVGKTPIKILIRDI 400
>UNIPROTKB|E2QW41 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060849 "regulation of transcription involved
in lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AAEX03002267
Ensembl:ENSCAFT00000012887 NextBio:20854275 Uniprot:E2QW41
Length = 394
Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
Identities = 57/163 (34%), Positives = 91/163 (55%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WA+N+P F L DQV NA Q S+PL + L A H + +
Sbjct: 223 AVEWARNIPFFPDLQITDQVALLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSA 282
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
+ +R+ +++ + + VD AE++CLKA+VLF S+ GL D VE+LQ+++Q
Sbjct: 283 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLFTSDACGLSDVAHVESLQEKSQ 342
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAK 164
L ++VR+ +P QP RFG+LLL R + S+ ++ +FF +
Sbjct: 343 CALEEYVRSQYPNQPTRFGKLLLRLPSLRTVSSSVIEQLFFVR 385
>UNIPROTKB|F1NTE7 [details] [associations]
symbol:F1NTE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008347 "glial cell
migration" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021764 "amygdala development" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021819
"layer formation in cerebral cortex" evidence=IEA] [GO:0021872
"forebrain generation of neurons" evidence=IEA] [GO:0021895
"cerebral cortex neuron differentiation" evidence=IEA] [GO:0021960
"anterior commissure morphogenesis" evidence=IEA] [GO:0030198
"extracellular matrix organization" evidence=IEA] [GO:0035019
"somatic stem cell maintenance" evidence=IEA] [GO:0035176 "social
behavior" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045165 "cell fate commitment"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA] [GO:0045766 "positive regulation of
angiogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0048712 "negative regulation of
astrocyte differentiation" evidence=IEA] [GO:0048814 "regulation of
dendrite morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0060164
"regulation of timing of neuron differentiation" evidence=IEA]
[GO:0060291 "long-term synaptic potentiation" evidence=IEA]
[GO:0090049 "regulation of cell migration involved in sprouting
angiogenesis" evidence=IEA] [GO:2000178 "negative regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000179
"positive regulation of neural precursor cell proliferation"
evidence=IEA] [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0043066
GO:GO:0003677 GO:GO:0007610 GO:GO:0060291 GO:GO:0004879
GO:GO:0001078 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0030198 GO:GO:0045766 GO:GO:0001077 GO:GO:0030522
GO:GO:0045165 GO:GO:0045787 GO:GO:2000179 GO:GO:2000178
GO:GO:0051128 GO:GO:2000648 GeneTree:ENSGT00700000104390
GO:GO:0090049 EMBL:AADN02002100 EMBL:AADN02002101 IPI:IPI00822861
ProteinModelPortal:F1NTE7 Ensembl:ENSGALT00000037276 OMA:SAITCIV
Uniprot:F1NTE7
Length = 269
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 56/184 (30%), Positives = 99/184 (53%)
Query: 5 WAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNGKA 64
W K L + + + Q++ QW++P+ ++ L + + + K
Sbjct: 83 WFKTLSAITCIVSQHQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKL 142
Query: 65 SQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK-------SETRGLKDSLQVENLQ 117
++ ++++ L V+ RFR + +D EFACLK +V FK SE R +++ + LQ
Sbjct: 143 NKIISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQ 202
Query: 118 DQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCD 177
D+AQ+ L ++ T +P QP RFG+LLL+ R+I + ++ +FF KT+ N + +LL D
Sbjct: 203 DEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSD 262
Query: 178 MYKN 181
MYK+
Sbjct: 263 MYKS 266
>UNIPROTKB|F1NNE1 [details] [associations]
symbol:F1NNE1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01282 SMART:SM00430 GO:GO:0005634 GO:GO:0003677
GO:GO:0004879 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104390 IPI:IPI00600540
EMBL:AADN02002100 EMBL:AADN02002101 Ensembl:ENSGALT00000024701
Uniprot:F1NNE1
Length = 175
Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
Identities = 52/151 (34%), Positives = 90/151 (59%)
Query: 38 QWSLPLLESSPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAV 97
QW++P+ ++ L + + + K ++ ++++ L V+ RFR + +D EFACLK +
Sbjct: 22 QWAIPVDANTLLAVSGMNGDNTDSQKLNKIISEIQALQEVVARFRQLRLDATEFACLKCI 81
Query: 98 VLFK-------SETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCR 150
V FK SE R +++ + LQD+AQ+ L ++ T +P QP RFG+LLL+ R
Sbjct: 82 VTFKAVPTHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYPTQPCRFGKLLLLLPALR 141
Query: 151 NIPSARVQHIFFAKTVANTSMEKLLCDMYKN 181
+I + ++ +FF KT+ N + +LL DMYK+
Sbjct: 142 SISPSTIEEVFFKKTIGNVPITRLLSDMYKS 172
>UNIPROTKB|P51128 [details] [associations]
symbol:rxra "Retinoic acid receptor RXR-alpha" species:8355
"Xenopus laevis" [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11446
PIR:C41977 ProteinModelPortal:P51128 SMR:P51128 Uniprot:P51128
Length = 488
Score = 229 (85.7 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 54/176 (30%), Positives = 89/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 306 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 364
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + L+VE L+++
Sbjct: 365 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPLEVEALREKVYA 424
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 425 SLEAYCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 480
>UNIPROTKB|B3KY83 [details] [associations]
symbol:RXRA "cDNA FLJ16020 fis, clone BRAMY2003287, highly
similar to RETINOIC ACID RECEPTOR RXR-ALPHA" species:9606 "Homo
sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007566 "embryo
implantation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA] [GO:0060687 "regulation
of branching involved in prostate gland morphogenesis"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006954
GO:GO:0045944 GO:GO:0051384 GO:GO:0007565 GO:GO:0001889
GO:GO:0007494 GO:GO:0044212 GO:GO:0043065 GO:GO:0032526
GO:GO:0003690 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038
GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0055012 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:AC156789 EMBL:AL354796 EMBL:AL669970 EMBL:AL683798
UniGene:Hs.590886 HGNC:HGNC:10477 EMBL:AK131192 IPI:IPI01011260
SMR:B3KY83 STRING:B3KY83 Ensembl:ENST00000540193 Uniprot:B3KY83
Length = 365
Score = 223 (83.6 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 183 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 241
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 242 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 301
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 302 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 357
>UNIPROTKB|F1P6M9 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 InterPro:IPR021780
Pfam:PF11825 OMA:KHFLPLD EMBL:AAEX03006790
Ensembl:ENSCAFT00000031555 Uniprot:F1P6M9
Length = 486
Score = 224 (83.9 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 53/176 (30%), Positives = 89/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 304 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 362
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D +E CL+A+VLF +++GL + +VE L+++
Sbjct: 363 SAGVGAIFDRVLTELVSKMRDMQMDKSELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 422
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 423 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 478
>UNIPROTKB|P19793 [details] [associations]
symbol:RXRA "Retinoic acid receptor RXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0007566 "embryo implantation" evidence=IEA] [GO:0031490
"chromatin DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0060528 "secretory columnal luminar epithelial
cell differentiation involved in prostate glandular acinus
development" evidence=IEA] [GO:0060687 "regulation of branching
involved in prostate gland morphogenesis" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0044323 "retinoic acid-responsive element
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0035357 "peroxisome proliferator activated receptor signaling
pathway" evidence=IDA] [GO:0019048 "virus-host interaction"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0006766 "vitamin metabolic process" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0003708 "retinoic acid receptor activity"
evidence=TAS] [GO:0008203 "cholesterol metabolic process"
evidence=TAS] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0070644 "vitamin D response element binding"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] Reactome:REACT_71
Reactome:REACT_111217 InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway
Reactome:REACT_111045 GO:GO:0019048 GO:GO:0008285 GO:GO:0005654
GO:GO:0032869 GO:GO:0045471 GO:GO:0046872 GO:GO:0007568
GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471090 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0008203 GO:GO:0001889 GO:GO:0044255
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 GO:GO:0000790 GO:GO:0003713 GO:GO:0032526
GO:GO:0003690 GO:GO:0046982 GO:GO:0001890
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0033189
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0010269 GO:GO:0031490 GO:GO:0033280 GO:GO:0031103
GO:GO:0060038 GO:GO:0055010 GO:GO:0060687 HOVERGEN:HBG005606
GO:GO:0006766 PDB:1R0N PDBsum:1R0N GO:GO:0060528 GO:GO:0035357
GO:GO:0055012 GO:GO:0044323 PDB:1FM6 PDB:1FM9 PDB:1K74 PDB:1RDT
PDB:1XV9 PDB:1XVP PDB:3H0A PDBsum:1FM6 PDBsum:1FM9 PDBsum:1K74
PDBsum:1RDT PDBsum:1XV9 PDBsum:1XVP PDBsum:3H0A PDB:1MV9 PDB:1MVC
PDB:1MZN PDB:2P1T PDB:2P1U PDB:2P1V PDB:2ZXZ PDB:2ZY0 PDB:3DZU
PDB:3DZY PDB:3E00 PDB:3E94 PDB:3FUG PDB:3KWY PDB:3OAP PDB:3OZJ
PDB:3PCU PDB:3R5M PDBsum:1MV9 PDBsum:1MVC PDBsum:1MZN PDBsum:2P1T
PDBsum:2P1U PDBsum:2P1V PDBsum:2ZXZ PDBsum:2ZY0 PDBsum:3DZU
PDBsum:3DZY PDBsum:3E00 PDBsum:3E94 PDBsum:3FUG PDBsum:3KWY
PDBsum:3OAP PDBsum:3OZJ PDBsum:3PCU PDBsum:3R5M PDB:1XLS
PDBsum:1XLS PDB:3R29 PDB:3R2A PDBsum:3R29 PDBsum:3R2A PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
DrugBank:DB00523 DrugBank:DB00926 PDB:1DSZ PDBsum:1DSZ
DrugBank:DB00210 OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:X52773 EMBL:AB307705 EMBL:AC156789 EMBL:AL354796
EMBL:AL669970 EMBL:AL683798 EMBL:BC110998 EMBL:DQ303444
IPI:IPI00418394 PIR:S09592 RefSeq:NP_002948.1 UniGene:Hs.590886
PDB:1BY4 PDB:1FBY PDB:1G1U PDB:1G5Y PDB:1LBD PDB:1RXR PDB:1YNW
PDB:2NLL PDB:3NSP PDB:3NSQ PDB:3UVV PDBsum:1BY4 PDBsum:1FBY
PDBsum:1G1U PDBsum:1G5Y PDBsum:1LBD PDBsum:1RXR PDBsum:1YNW
PDBsum:2NLL PDBsum:3NSP PDBsum:3NSQ PDBsum:3UVV DisProt:DP00062
ProteinModelPortal:P19793 SMR:P19793 DIP:DIP-641N IntAct:P19793
MINT:MINT-98407 STRING:P19793 PhosphoSite:P19793 DMDM:133701
PaxDb:P19793 PRIDE:P19793 DNASU:6256 Ensembl:ENST00000481739
GeneID:6256 KEGG:hsa:6256 UCSC:uc004cfb.2 CTD:6256
GeneCards:GC09P137208 HGNC:HGNC:10477 HPA:CAB004565 HPA:CAB005352
MIM:180245 neXtProt:NX_P19793 PharmGKB:PA34890 InParanoid:P19793
KO:K08524 OMA:KHFLPLD BindingDB:P19793 ChEMBL:CHEMBL2061
EvolutionaryTrace:P19793 GenomeRNAi:6256 NextBio:24295
PMAP-CutDB:P19793 ArrayExpress:P19793 Bgee:P19793 CleanEx:HS_RXRA
Genevestigator:P19793 GermOnline:ENSG00000186350 Uniprot:P19793
Length = 462
Score = 223 (83.6 bits), Expect = 8.2e-18, P = 8.2e-18
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 280 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 338
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 339 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 398
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 399 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 454
>MGI|MGI:98214 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IGI] [GO:0001890 "placenta development"
evidence=IMP] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=TAS]
[GO:0003677 "DNA binding" evidence=ISO;IDA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IGI] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO;IDA] [GO:0004886 "9-cis retinoic acid receptor
activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0007507 "heart development" evidence=IMP;TAS]
[GO:0007566 "embryo implantation" evidence=IGI] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=TAS] [GO:0019048 "virus-host interaction"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0031490 "chromatin DNA
binding" evidence=IDA] [GO:0031641 "regulation of myelination"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0032526 "response to retinoic acid" evidence=ISO] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=ISO] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IGI] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;ISO;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO;IDA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=ISO] [GO:0055007 "cardiac muscle cell
differentiation" evidence=TAS] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IMP] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IGI;IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IGI;IMP;TAS]
[GO:0060485 "mesenchyme development" evidence=TAS] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IMP]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IMP] [GO:0060978 "angiogenesis involved in
coronary vascular morphogenesis" evidence=TAS] [GO:0061032
"visceral serous pericardium development" evidence=TAS]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98214 GO:GO:0019048 GO:GO:0008285
GO:GO:0005654 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001701 GO:GO:0006954 GO:GO:0045944
GO:GO:0051384 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122
GO:GO:0043065 Reactome:REACT_127416 GO:GO:0000790 GO:GO:0032526
GO:GO:0060978 GO:GO:0003690 GO:GO:0010629 GO:GO:0001893
GO:GO:0033189 GO:GO:0010269 GO:GO:0031490 GO:GO:0033280
GO:GO:0007566 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 Reactome:REACT_27166 HOVERGEN:HBG005606 GO:GO:0061032
GO:GO:0060528 GO:GO:0060485 GeneTree:ENSGT00690000101777
GO:GO:0035357 PDB:1XDK PDBsum:1XDK GO:GO:0055012 GO:GO:0044323
PDB:3A9E PDBsum:3A9E PDB:1DKF PDBsum:1DKF HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 OMA:KHFLPLD EMBL:M84817 EMBL:X66223
IPI:IPI00467109 PIR:S26668 RefSeq:NP_035435.1 UniGene:Mm.24624
ProteinModelPortal:P28700 SMR:P28700 IntAct:P28700
MINT:MINT-2775018 STRING:P28700 PhosphoSite:P28700 PRIDE:P28700
Ensembl:ENSMUST00000077257 Ensembl:ENSMUST00000166775 GeneID:20181
KEGG:mmu:20181 InParanoid:P28700 BindingDB:P28700 ChEMBL:CHEMBL3084
ChiTaRS:RXRA EvolutionaryTrace:P28700 NextBio:297705 Bgee:P28700
CleanEx:MM_RXRA Genevestigator:P28700 GermOnline:ENSMUSG00000015846
GO:GO:0070644 Uniprot:P28700
Length = 467
Score = 223 (83.6 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 285 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 343
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 344 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 403
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 404 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 459
>RGD|3610 [details] [associations]
symbol:Rxra "retinoid X receptor alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000790 "nuclear
chromatin" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001890 "placenta development" evidence=IEP;ISO]
[GO:0001893 "maternal placenta development" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA;TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=IEP]
[GO:0007494 "midgut development" evidence=IEP] [GO:0007507 "heart
development" evidence=ISO] [GO:0007565 "female pregnancy"
evidence=IEP] [GO:0007566 "embryo implantation" evidence=IEA;ISO]
[GO:0007568 "aging" evidence=IEP] [GO:0007584 "response to nutrient"
evidence=IEP] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation" evidence=IMP]
[GO:0010269 "response to selenium ion" evidence=IEP] [GO:0014070
"response to organic cyclic compound" evidence=IEP] [GO:0019048
"virus-host interaction" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031490 "chromatin DNA binding"
evidence=IEA;ISO] [GO:0031641 "regulation of myelination"
evidence=IDA] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0032526 "response to retinoic acid" evidence=IEP;ISO] [GO:0032869
"cellular response to insulin stimulus" evidence=IEP] [GO:0033189
"response to vitamin A" evidence=IEP] [GO:0033280 "response to
vitamin D" evidence=IEP] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA;ISO] [GO:0042809
"vitamin D receptor binding" evidence=IEA;ISO] [GO:0042974 "retinoic
acid receptor binding" evidence=IPI] [GO:0043065 "positive regulation
of apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0044323 "retinoic acid-responsive
element binding" evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046982 "protein heterodimerization activity" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0051384 "response to glucocorticoid stimulus" evidence=IEP;IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA;ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA;ISO] [GO:0060038 "cardiac muscle cell
proliferation" evidence=IEA;ISO] [GO:0060528 "secretory columnal
luminar epithelial cell differentiation involved in prostate
glandular acinus development" evidence=IEA;ISO] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IEA;ISO] [GO:0070644 "vitamin D response element binding"
evidence=IEA;ISO] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0005634 GO:GO:0019048
GO:GO:0008285 GO:GO:0006355 GO:GO:0032869 GO:GO:0045471 GO:GO:0046872
GO:GO:0007568 GO:GO:0030424 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0006954 GO:GO:0045944 GO:GO:0051384
GO:GO:0007565 GO:GO:0001889 GO:GO:0007494 GO:GO:0000122 GO:GO:0043065
GO:GO:0000790 GO:GO:0032526 GO:GO:0001890 GO:GO:0033189 GO:GO:0010269
GO:GO:0031490 GO:GO:0033280 GO:GO:0031103 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0060528
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
GO:GO:0070644 EMBL:L06482 IPI:IPI00188860 PIR:A47278 PIR:I67427
UniGene:Rn.108206 ProteinModelPortal:Q05343 SMR:Q05343 STRING:Q05343
PhosphoSite:Q05343 UCSC:RGD:3610 InParanoid:Q05343 BindingDB:Q05343
ChEMBL:CHEMBL4431 ArrayExpress:Q05343 Genevestigator:Q05343
GermOnline:ENSRNOG00000009446 Uniprot:Q05343
Length = 467
Score = 223 (83.6 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 285 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 343
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 344 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 403
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 404 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 459
>UNIPROTKB|Q0VJ96 [details] [associations]
symbol:Rxra "Retinoic acid receptor RXR-alpha"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3610 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 HOVERGEN:HBG005606 EMBL:CH474001 GO:GO:0060528
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0055012
GO:GO:0044323 GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
CTD:6256 KO:K08524 GO:GO:0070644 UniGene:Rn.108206 EMBL:AM295012
EMBL:AM295013 EMBL:AM392401 IPI:IPI00851118 RefSeq:NP_036937.2
SMR:Q0VJ96 STRING:Q0VJ96 Ensembl:ENSRNOT00000012892 GeneID:25271
KEGG:rno:25271 InParanoid:Q0VJ96 NextBio:605957
Genevestigator:Q0VJ96 Uniprot:Q0VJ96
Length = 467
Score = 223 (83.6 bits), Expect = 8.5e-18, P = 8.5e-18
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 285 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 343
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 344 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 403
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 404 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 459
>UNIPROTKB|P51129 [details] [associations]
symbol:rxrg "Retinoic acid receptor RXR-gamma" species:8355
"Xenopus laevis" [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0046966 "thyroid hormone receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOVERGEN:HBG005606 InterPro:IPR021780 Pfam:PF11825 EMBL:L11443
PIR:D41977 ProteinModelPortal:P51129 SMR:P51129 Uniprot:P51129
Length = 470
Score = 223 (83.6 bits), Expect = 8.6e-18, P = 8.6e-18
Identities = 51/176 (28%), Positives = 89/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 288 VEWAKRIPYFSDLPLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 346
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL ++ +VE L+++
Sbjct: 347 NAGVGSIFDRVLTELVSKMKDMDMDKSELGCLRAIVLFNPDAKGLSNAAEVEALREKVYA 406
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 407 TLESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 462
>UNIPROTKB|F1MX52 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070644 "vitamin D response element binding"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060528 "secretory
columnal luminar epithelial cell differentiation involved in
prostate glandular acinus development" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044323
"retinoic acid-responsive element binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0019048 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060038 GO:GO:0055010
GO:GO:0060687 GO:GO:0060528 GeneTree:ENSGT00690000101777
GO:GO:0035357 GO:GO:0055012 GO:GO:0044323 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD GO:GO:0070644
EMBL:DAAA02032421 EMBL:DAAA02032422 EMBL:DAAA02032423
IPI:IPI00722888 Ensembl:ENSBTAT00000023729 Uniprot:F1MX52
Length = 474
Score = 223 (83.6 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 292 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 350
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 351 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 410
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 411 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 466
>UNIPROTKB|F1NH64 [details] [associations]
symbol:RXRA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0004886 "9-cis retinoic acid
receptor activity" evidence=IEA] [GO:0007566 "embryo implantation"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0060038
"cardiac muscle cell proliferation" evidence=IEA] [GO:0060528
"secretory columnal luminar epithelial cell differentiation
involved in prostate glandular acinus development" evidence=IEA]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0070644 "vitamin D response
element binding" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0000790 GO:GO:0031490 GO:GO:0060687
GeneTree:ENSGT00690000101777 GO:GO:0035357 GO:GO:0044323
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OMA:KHFLPLD
GO:GO:0070644 EMBL:AADN02026433 EMBL:AADN02026434 EMBL:AADN02026435
IPI:IPI00584474 Ensembl:ENSGALT00000004139 Uniprot:F1NH64
Length = 448
Score = 222 (83.2 bits), Expect = 9.7e-18, P = 9.7e-18
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 266 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 324
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 325 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYA 384
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 385 SLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 440
>ZFIN|ZDB-GENE-990415-243 [details] [associations]
symbol:rxrab "retinoid x receptor, alpha b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISS;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-243 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 EMBL:U29894 IPI:IPI00481196 PIR:I50514
RefSeq:NP_571228.1 UniGene:Dr.624 ProteinModelPortal:Q90415
SMR:Q90415 STRING:Q90415 GeneID:793011 KEGG:dre:793011 CTD:793011
HOGENOM:HOG000260821 InParanoid:Q90415 OrthoDB:EOG4SJ5DV
NextBio:20931280 ArrayExpress:Q90415 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 Uniprot:Q90415
Length = 379
Score = 219 (82.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 197 VEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 255
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 256 TAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPSEVEALRERVYA 315
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 316 SLEAYCKHKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 371
>ZFIN|ZDB-GENE-040718-34 [details] [associations]
symbol:rxrgb "retinoid X receptor, gamma b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040718-34 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 InterPro:IPR021780 Pfam:PF11825
EMBL:BX296562 IPI:IPI00972012 Ensembl:ENSDART00000110950
Bgee:F1QDD2 Uniprot:F1QDD2
Length = 458
Score = 220 (82.5 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 53/177 (29%), Positives = 89/177 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 275 VEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSITVKDGI-LLGTGLHVHRSSAH 333
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D E CL+A+VLF + +GL +SL+VE L+++
Sbjct: 334 SAGVGSIFNRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNSLEVEALREKVYA 393
Query: 123 MLAQHVRTHHPAQPAR-FGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP R F +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 394 SLETYTKQKYPDQPGRRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 450
>ZFIN|ZDB-GENE-070314-2 [details] [associations]
symbol:rxraa "retinoid X receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CU062650 EMBL:BX001031
IPI:IPI00994409 ProteinModelPortal:F1R1Y8
Ensembl:ENSDART00000124173 ArrayExpress:F1R1Y8 Bgee:F1R1Y8
Uniprot:F1R1Y8
Length = 495
Score = 220 (82.5 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 53/176 (30%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 313 VEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGI-LLATGLHVHRNSAH 371
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A+VLF +++GL + +VE L+++
Sbjct: 372 SAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYA 431
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 432 SLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 487
>ZFIN|ZDB-GENE-980526-36 [details] [associations]
symbol:rxrga "retinoid x receptor, gamma a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-36 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 KO:K08524 EMBL:U29940 EMBL:BC059576
IPI:IPI00511229 PIR:I50515 RefSeq:NP_571292.2 UniGene:Dr.348
ProteinModelPortal:Q90416 SMR:Q90416 STRING:Q90416 GeneID:30464
KEGG:dre:30464 CTD:30464 OrthoDB:EOG42RD7K NextBio:20806858
ArrayExpress:Q90416 Uniprot:Q90416
Length = 441
Score = 218 (81.8 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 52/176 (29%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ LP DQVI + S+ + + L HV
Sbjct: 259 VEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTVKDGI-LLATGLHVHRSSAH 317
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + R + +D E CL+A+VLF + +GL + +VE L+++
Sbjct: 318 SAGVGSIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDAKGLSNPSEVEALREKVYA 377
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + ++P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 378 SLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 433
>UNIPROTKB|F8VZR5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 EMBL:CR354565
HGNC:HGNC:10478 ChiTaRS:RXRB IPI:IPI01022583 SMR:F8VZR5
Ensembl:ENST00000546472 Ensembl:ENST00000548862
Ensembl:ENST00000549199 Ensembl:ENST00000552454
Ensembl:ENST00000552822 Uniprot:F8VZR5
Length = 389
Score = 214 (80.4 bits), Expect = 4.6e-17, P = 4.6e-17
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 207 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 265
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 266 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 325
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 326 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 381
>UNIPROTKB|F8VNP5 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL662824 EMBL:AL844527 EMBL:CR759733
EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478 ChiTaRS:RXRB
IPI:IPI01020693 SMR:F8VNP5 Ensembl:ENST00000546468
Ensembl:ENST00000547763 Ensembl:ENST00000549662
Ensembl:ENST00000550626 Ensembl:ENST00000550731 Uniprot:F8VNP5
Length = 392
Score = 214 (80.4 bits), Expect = 4.7e-17, P = 4.7e-17
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 210 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 268
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 269 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 328
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 329 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 384
>MGI|MGI:98216 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IGI] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IDA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98216 GO:GO:0005634
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
GO:GO:0032526 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:M84819 EMBL:X66225 EMBL:S62948
EMBL:BC058401 IPI:IPI00124345 PIR:B41727 PIR:S26670
RefSeq:NP_001153203.1 RefSeq:NP_033133.1 UniGene:Mm.3475
ProteinModelPortal:P28705 SMR:P28705 STRING:P28705
PhosphoSite:P28705 PRIDE:P28705 Ensembl:ENSMUST00000015987
Ensembl:ENSMUST00000111384 Ensembl:ENSMUST00000111386 GeneID:20183
KEGG:mmu:20183 UCSC:uc007dla.2 InParanoid:P28705 BindingDB:P28705
ChEMBL:CHEMBL4402 NextBio:297713 Bgee:P28705 CleanEx:MM_RXRG
Genevestigator:P28705 GermOnline:ENSMUSG00000015843 Uniprot:P28705
Length = 463
Score = 215 (80.7 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 281 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 339
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL + +VE L+++
Sbjct: 340 SAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYA 399
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 400 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDSFLMEM 455
>UNIPROTKB|Q0VC20 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K EMBL:BC120391
IPI:IPI00712482 RefSeq:NP_001068876.1 UniGene:Bt.11333
ProteinModelPortal:Q0VC20 SMR:Q0VC20 STRING:Q0VC20 PRIDE:Q0VC20
Ensembl:ENSBTAT00000022350 GeneID:509500 KEGG:bta:509500 CTD:6258
InParanoid:Q0VC20 KO:K08526 OMA:FMKFPTG NextBio:20868991
Uniprot:Q0VC20
Length = 463
Score = 214 (80.4 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 281 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 339
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL + +VE L+++
Sbjct: 340 SAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYA 399
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 400 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
>UNIPROTKB|E2RD69 [details] [associations]
symbol:RXRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0004886 "9-cis
retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:AAEX03018391
RefSeq:XP_536146.2 ProteinModelPortal:E2RD69
Ensembl:ENSCAFT00000021179 GeneID:478989 KEGG:cfa:478989
NextBio:20854245 Uniprot:E2RD69
Length = 463
Score = 214 (80.4 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 281 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 339
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL + +VE L+++
Sbjct: 340 SAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYA 399
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 400 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
>UNIPROTKB|P48443 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0007422 "peripheral
nervous system development" evidence=IEA] [GO:0007507 "heart
development" evidence=IEA] [GO:0007519 "skeletal muscle tissue
development" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0031641 "regulation of myelination" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0007507 GO:GO:0030182 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0007422
EMBL:CH471067 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0032526
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0007519 HOVERGEN:HBG005606 EMBL:AL160058 DrugBank:DB00523
DrugBank:DB00926 DrugBank:DB00210 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:U38480 EMBL:CR456705
EMBL:BC012063 IPI:IPI00009736 RefSeq:NP_001243500.1
RefSeq:NP_008848.1 UniGene:Hs.26550 PDB:2GL8 PDBsum:2GL8
ProteinModelPortal:P48443 SMR:P48443 DIP:DIP-56220N IntAct:P48443
MINT:MINT-1378806 STRING:P48443 PhosphoSite:P48443 DMDM:1350913
PaxDb:P48443 PRIDE:P48443 DNASU:6258 Ensembl:ENST00000359842
GeneID:6258 KEGG:hsa:6258 UCSC:uc001gda.3 GeneCards:GC01M165370
HGNC:HGNC:10479 HPA:CAB002615 MIM:180247 neXtProt:NX_P48443
PharmGKB:PA34892 InParanoid:P48443 PhylomeDB:P48443
BindingDB:P48443 ChEMBL:CHEMBL2004 EvolutionaryTrace:P48443
GenomeRNAi:6258 NextBio:24303 ArrayExpress:P48443 Bgee:P48443
CleanEx:HS_RXRG Genevestigator:P48443 GermOnline:ENSG00000143171
Uniprot:P48443
Length = 463
Score = 214 (80.4 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 281 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 339
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL + +VE L+++
Sbjct: 340 SAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYA 399
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 400 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
>UNIPROTKB|Q0GFF6 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 OMA:FMKFPTG EMBL:DQ866834 EMBL:AY429474
RefSeq:NP_001123685.1 UniGene:Ssc.19608 ProteinModelPortal:Q0GFF6
SMR:Q0GFF6 STRING:Q0GFF6 Ensembl:ENSSSCT00000006936 GeneID:445465
KEGG:ssc:445465 Uniprot:Q0GFF6
Length = 463
Score = 214 (80.4 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 281 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 339
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL + +VE L+++
Sbjct: 340 SAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYA 399
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 400 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
>RGD|620046 [details] [associations]
symbol:Rxrg "retinoid X receptor gamma" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0007422
"peripheral nervous system development" evidence=IEP] [GO:0007507
"heart development" evidence=IEP] [GO:0007519 "skeletal muscle
tissue development" evidence=IEP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0030182 "neuron differentiation" evidence=IEP]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:620046
GO:GO:0005634 GO:GO:0007507 GO:GO:0030182 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007422 GO:GO:0014070 GO:GO:0032526 GO:GO:0032870
GO:GO:0031641 GO:GO:0007519 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HSSP:P19793 HOGENOM:HOG000260821
GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K
CTD:6258 KO:K08526 OMA:FMKFPTG EMBL:BC091363 IPI:IPI00363863
RefSeq:NP_113953.1 UniGene:Rn.40816 ProteinModelPortal:Q5BJR8
SMR:Q5BJR8 STRING:Q5BJR8 PhosphoSite:Q5BJR8
Ensembl:ENSRNOT00000006117 GeneID:83574 KEGG:rno:83574
UCSC:RGD:620046 InParanoid:Q5BJR8 BindingDB:Q5BJR8
ChEMBL:CHEMBL4277 NextBio:616077 ArrayExpress:Q5BJR8
Genevestigator:Q5BJR8 Uniprot:Q5BJR8
Length = 463
Score = 214 (80.4 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 281 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 339
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL + +VE L+++
Sbjct: 340 SAGVGSIFDRVLTELVSKMKDMRMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYA 399
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 400 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 455
>UNIPROTKB|F1NSP3 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GeneTree:ENSGT00690000101777 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 IPI:IPI00600229 EMBL:AADN02034021 EMBL:AADN02034022
EMBL:AADN02034023 Ensembl:ENSGALT00000005387 OMA:FIKFPAG
Uniprot:F1NSP3
Length = 467
Score = 214 (80.4 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 285 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 343
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL +VE+L+++
Sbjct: 344 SAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYA 403
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 404 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 459
>UNIPROTKB|P28701 [details] [associations]
symbol:RXRG "Retinoic acid receptor RXR-gamma" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004886 "9-cis retinoic
acid receptor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
HOVERGEN:HBG005606 HOGENOM:HOG000260821 GO:GO:0004886
InterPro:IPR021780 Pfam:PF11825 OrthoDB:EOG42RD7K CTD:6258
KO:K08526 EMBL:X58997 EMBL:S72435 IPI:IPI00584417 IPI:IPI00600229
PIR:A43781 PIR:S46479 RefSeq:NP_990625.1 UniGene:Gga.717
ProteinModelPortal:P28701 SMR:P28701 STRING:P28701 GeneID:396231
KEGG:gga:396231 InParanoid:P28701 NextBio:20816283 Uniprot:P28701
Length = 467
Score = 214 (80.4 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 50/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F+ L DQVI + S+ + + L HV
Sbjct: 285 VEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSV-QDGILLATGLHVHRSSAH 343
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + RVL ++ + + + +D +E CL+A+VLF + +GL +VE+L+++
Sbjct: 344 SAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSSPSEVESLREKVYA 403
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P QP RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 404 TLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 459
>UNIPROTKB|A6H7I6 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 OMA:FLPERHA EMBL:DAAA02054891
EMBL:BC146260 IPI:IPI00709103 UniGene:Bt.57603 SMR:A6H7I6
STRING:A6H7I6 Ensembl:ENSBTAT00000000860 InParanoid:A6H7I6
Uniprot:A6H7I6
Length = 532
Score = 214 (80.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 350 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 408
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 409 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 468
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 469 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 524
>UNIPROTKB|A5D9P3 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
EMBL:BX640585 RefSeq:NP_001177175.1 UniGene:Ssc.1598
ProteinModelPortal:A5D9P3 SMR:A5D9P3 STRING:A5D9P3
Ensembl:ENSSSCT00000036123 GeneID:100156801 KEGG:ssc:100156801
OMA:FLPERHA Uniprot:A5D9P3
Length = 532
Score = 214 (80.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 350 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 408
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 409 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 468
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 469 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 524
>UNIPROTKB|Q5TJF7 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AJ630366 HOVERGEN:HBG005606 HOGENOM:HOG000260821
InterPro:IPR021780 Pfam:PF11825 ProteinModelPortal:Q5TJF7
SMR:Q5TJF7 STRING:Q5TJF7 Uniprot:Q5TJF7
Length = 533
Score = 214 (80.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 351 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 409
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 410 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 469
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 470 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 525
>UNIPROTKB|P28702 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0004886 "9-cis retinoic acid receptor activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IEA]
[GO:0071300 "cellular response to retinoic acid" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=NAS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
Pathway_Interaction_DB:a6b1_a6b4_integrin_pathway GO:GO:0005654
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0044212 GO:GO:0003713 GO:GO:0030375
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
DrugBank:DB00459 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
EMBL:AL031228 GO:GO:0060038 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:CR759733 EMBL:CR936877 HOVERGEN:HBG005606
DrugBank:DB00307 GO:GO:0055012 PDB:1UHL PDBsum:1UHL
DrugBank:DB00523 DrugBank:DB00926 DrugBank:DB00210 DrugBank:DB00799
HOGENOM:HOG000260821 OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525
EMBL:M84820 EMBL:X63522 EMBL:AF065396 EMBL:AF120161 EMBL:HQ709179
EMBL:AB209244 EMBL:CR354565 EMBL:BC001167 EMBL:X66424
IPI:IPI00426305 IPI:IPI00607575 PIR:S37781 RefSeq:NP_068811.1
UniGene:Hs.388034 PDB:1H9U PDBsum:1H9U ProteinModelPortal:P28702
SMR:P28702 IntAct:P28702 MINT:MINT-1365658 STRING:P28702
PhosphoSite:P28702 DMDM:1350911 PaxDb:P28702 PRIDE:P28702
DNASU:6257 Ensembl:ENST00000374680 Ensembl:ENST00000374685
Ensembl:ENST00000383217 Ensembl:ENST00000415157
Ensembl:ENST00000415909 Ensembl:ENST00000431820
Ensembl:ENST00000436753 GeneID:6257 KEGG:hsa:6257 UCSC:uc003odb.3
CTD:6257 GeneCards:GC06M033161 HGNC:HGNC:10478 HPA:CAB002003
MIM:180246 neXtProt:NX_P28702 PharmGKB:PA34891 PhylomeDB:P28702
BindingDB:P28702 ChEMBL:CHEMBL1870 ChiTaRS:RXRB
EvolutionaryTrace:P28702 GenomeRNAi:6257 NextBio:24299
ArrayExpress:P28702 Bgee:P28702 CleanEx:HS_RXRB
Genevestigator:P28702 GermOnline:ENSG00000204231 Uniprot:P28702
Length = 533
Score = 214 (80.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 351 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 409
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 410 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 469
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 470 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 525
>RGD|3611 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10116 "Rattus
norvegicus" [GO:0001701 "in utero embryonic development"
evidence=ISO] [GO:0001893 "maternal placenta development"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030375 "thyroid hormone
receptor coactivator activity" evidence=IDA] [GO:0031641 "regulation
of myelination" evidence=IDA] [GO:0042809 "vitamin D receptor
binding" evidence=IDA] [GO:0042974 "retinoic acid receptor binding"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046966 "thyroid hormone receptor binding" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0060038 "cardiac muscle cell proliferation"
evidence=ISO] [GO:0071300 "cellular response to retinoic acid"
evidence=ISO] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0030375 GO:GO:0046982 GO:GO:0042974
GO:GO:0046966 GO:GO:0060038 GO:GO:0031641 HOVERGEN:HBG005606
GO:GO:0042809 GO:GO:0055012 OrthoDB:EOG4SJ5DV GO:GO:0004886
EMBL:M81766 IPI:IPI00394256 PIR:A41651 UniGene:Rn.49295
ProteinModelPortal:P49743 SMR:P49743 STRING:P49743 PhosphoSite:P49743
UCSC:RGD:3611 InParanoid:P49743 BindingDB:P49743 ChEMBL:CHEMBL2805
ArrayExpress:P49743 Genevestigator:P49743
GermOnline:ENSRNOG00000000464 Uniprot:P49743
Length = 458
Score = 212 (79.7 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 276 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 334
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 335 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYA 394
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 395 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 450
>MGI|MGI:98215 [details] [associations]
symbol:Rxrb "retinoid X receptor beta" species:10090 "Mus
musculus" [GO:0001701 "in utero embryonic development"
evidence=IGI] [GO:0001893 "maternal placenta development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030375 "thyroid hormone receptor
coactivator activity" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0042809 "vitamin D receptor binding"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IGI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048384 "retinoic
acid receptor signaling pathway" evidence=IDA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IGI;IMP]
[GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
[GO:0071300 "cellular response to retinoic acid" evidence=IDA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:98215 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0001701 GO:GO:0045944 GO:GO:0044212 GO:GO:0001893
EMBL:AF100956 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:D21831
EMBL:BC049773 EMBL:M84818 EMBL:M26804 EMBL:X66224 IPI:IPI00226615
IPI:IPI00890271 PIR:A34418 PIR:D41727 PIR:I84718 PIR:S26669
RefSeq:NP_001192145.1 RefSeq:NP_035436.1 UniGene:Mm.1243
ProteinModelPortal:P28704 SMR:P28704 IntAct:P28704 STRING:P28704
PhosphoSite:P28704 PaxDb:P28704 PRIDE:P28704
Ensembl:ENSMUST00000116612 GeneID:20182 KEGG:mmu:20182
UCSC:uc008ixs.1 InParanoid:P28704 BindingDB:P28704
ChEMBL:CHEMBL4047 NextBio:297709 Bgee:P28704 CleanEx:MM_RXRB
Genevestigator:P28704 GermOnline:ENSMUSG00000039656 Uniprot:P28704
Length = 520
Score = 212 (79.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 51/176 (28%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 338 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 396
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 397 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYA 456
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L +M
Sbjct: 457 SLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 512
>UNIPROTKB|E9PK95 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AL645940 EMBL:AL662824 EMBL:AL844527
EMBL:CR759733 EMBL:CR936877 EMBL:CR354565 HGNC:HGNC:10478
ChiTaRS:RXRB IPI:IPI00984407 SMR:E9PK95 Ensembl:ENST00000531100
Ensembl:ENST00000544186 Ensembl:ENST00000546880
Ensembl:ENST00000549889 Ensembl:ENST00000552670
Ensembl:ENST00000553072 UCSC:uc011dqr.2 Uniprot:E9PK95
Length = 347
Score = 204 (76.9 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNA------SEHV 56
V+WAK +P F++LP DQVI + S+ + + L S H
Sbjct: 161 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHS 220
Query: 57 AAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENL 116
A V G + RVL ++ + R + +D E CL+A++LF + +GL + +VE L
Sbjct: 221 AGV--GAIFDRSLS-RVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVL 277
Query: 117 QDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+++ L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L
Sbjct: 278 REKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLM 337
Query: 177 DM 178
+M
Sbjct: 338 EM 339
>UNIPROTKB|Q7SIF6 [details] [associations]
symbol:Q7SIF6 "Gene regulation protein" species:7102
"Heliothis virescens" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 PRINTS:PR00545
SMART:SM00430 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 PDB:1R1K PDB:1R20 PDB:2R40 PDBsum:1R1K PDBsum:1R20
PDBsum:2R40 PDB:1G2N PDB:3IXP PDBsum:1G2N PDBsum:3IXP
ProteinModelPortal:Q7SIF6 SMR:Q7SIF6 IntAct:Q7SIF6
EvolutionaryTrace:Q7SIF6 Uniprot:Q7SIF6
Length = 264
Score = 162 (62.1 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 36/110 (32%), Positives = 62/110 (56%)
Query: 72 RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTH 131
RVL+ + + R + VD AE+ LKA++L + +GLK+ +VE L+++ + L ++ R
Sbjct: 145 RVLSELSLKMRTLRVDQAEYVALKAIILLNPDVKGLKNRQEVEVLREKMFLCLDEYCRRS 204
Query: 132 HPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYKN 181
++ RF LLL R+I +H+FF VA+TS+ + D +N
Sbjct: 205 RSSEEGRFAALLLRLPALRSISLKSFEHLFFFHLVADTSIAGYIRDALRN 254
Score = 53 (23.7 bits), Expect = 5.6e-16, Sum P(2) = 5.6e-16
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
V WA+++P F+ L DQ++
Sbjct: 59 VVWARDIPHFSQLEMEDQIL 78
>UNIPROTKB|A5D9P5 [details] [associations]
symbol:RXRB "Retinoid X receptor, beta" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CT737383 EMBL:BX640585
ProteinModelPortal:A5D9P5 SMR:A5D9P5 STRING:A5D9P5
Ensembl:ENSSSCT00000036293 Uniprot:A5D9P5
Length = 414
Score = 204 (76.9 bits), Expect = 7.3e-16, P = 7.3e-16
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNA------SEHV 56
V+WAK +P F++LP DQVI + S+ + + L S H
Sbjct: 228 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHS 287
Query: 57 AAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENL 116
A V G + RVL ++ + R + +D E CL+A++LF + +GL + +VE L
Sbjct: 288 AGV--GAIFDRSLS-RVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVL 344
Query: 117 QDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+++ L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L
Sbjct: 345 REKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLM 404
Query: 177 DM 178
+M
Sbjct: 405 EM 406
>MGI|MGI:1353604 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] Reactome:REACT_13641
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1353604 GO:GO:0005829 GO:GO:0045893
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018
HOVERGEN:HBG005606 eggNOG:NOG241134 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 CTD:3174 KO:K08037 OrthoDB:EOG4G4GQH
EMBL:AJ242626 IPI:IPI00322956 RefSeq:NP_038948.1 UniGene:Mm.330897
ProteinModelPortal:Q9WUU6 SMR:Q9WUU6 STRING:Q9WUU6
PhosphoSite:Q9WUU6 PRIDE:Q9WUU6 Ensembl:ENSMUST00000108393
GeneID:30942 KEGG:mmu:30942 InParanoid:Q9WUU6 NextBio:307386
Bgee:Q9WUU6 CleanEx:MM_HNF4G Genevestigator:Q9WUU6
GermOnline:ENSMUSG00000017688 Uniprot:Q9WUU6
Length = 408
Score = 203 (76.5 bits), Expect = 9.0e-16, P = 9.0e-16
Identities = 48/176 (27%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L + +V +
Sbjct: 151 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSM--MYKDILLLGNHYVIHRNSC 208
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + RVL+ +++ F+ + +D E+ACLKA+V F + +GL D ++++N++ Q Q+
Sbjct: 209 EVEVSRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQI 268
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 269 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>UNIPROTKB|E2R9K8 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:AAEX03015880 Ensembl:ENSCAFT00000013166 Uniprot:E2R9K8
Length = 462
Score = 203 (76.5 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 48/176 (27%), Positives = 88/176 (50%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F+ LP DQV A + S+ + L + +V +
Sbjct: 205 VEWAKYIPAFSELPLDDQVALLRAHAGEHLLLGATKRSM--VYKDILLLGNNYVIHRNSS 262
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + RVL+ +++ F+ + +D E+ACLKA+V F + +GL D ++++N++ Q Q+
Sbjct: 263 EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQL 322
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 323 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 378
>UNIPROTKB|F1PUF6 [details] [associations]
symbol:RXRB "Retinoic acid receptor RXR-beta" species:9615
"Canis lupus familiaris" [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 OMA:FLPERHA EMBL:AAEX03008237
Ensembl:ENSCAFT00000001418 NextBio:20856477 Uniprot:F1PUF6
Length = 536
Score = 204 (76.9 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNA------SEHV 56
V+WAK +P F++LP DQVI + S+ + + L S H
Sbjct: 350 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHS 409
Query: 57 AAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENL 116
A V G + RVL ++ + R + +D E CL+A++LF + +GL + +VE L
Sbjct: 410 AGV--GAIFDRSLS-RVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVL 466
Query: 117 QDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+++ L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L
Sbjct: 467 REKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLM 526
Query: 177 DM 178
+M
Sbjct: 527 EM 528
>ZFIN|ZDB-GENE-030131-1077 [details] [associations]
symbol:hnf4a "hepatocyte nuclear factor 4, alpha"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-1077 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20393 EMBL:CR318614 EMBL:BC056550 IPI:IPI00496171
UniGene:Dr.77049 SMR:Q6PHH5 STRING:Q6PHH5
Ensembl:ENSDART00000028236 Ensembl:ENSDART00000145426
InParanoid:Q6PHH5 Uniprot:Q6PHH5
Length = 463
Score = 202 (76.2 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 51/178 (28%), Positives = 88/178 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAA--VP 60
V+WAK +P+F LP DQV A + S+ + L ++H+ P
Sbjct: 199 VEWAKYIPAFCDLPLDDQVALLRAHAGEHLLLGAAKRSM--MYKDILLLGNDHIIPRNCP 256
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+ S+ A VR+L+ ++ F+ + +D E+ACLKA+V F + +GL D +++ ++ Q
Sbjct: 257 ELEVSRVA--VRILDELVLPFQDLQIDDNEYACLKAIVFFDPDAKGLSDPSKIKRMRYQV 314
Query: 121 QVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
QV L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 315 QVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMAKIDNLLQEM 372
>UNIPROTKB|F1N2D7 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:DAAA02038880
IPI:IPI00904047 Ensembl:ENSBTAT00000052638 ArrayExpress:F1N2D7
Uniprot:F1N2D7
Length = 408
Score = 200 (75.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 48/176 (27%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L + +V +
Sbjct: 151 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSM--MYKDILLLGNNYVIHRNSC 208
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + RVL+ +++ F+ + +D E+ACLKA+V F + +GL D ++++N++ Q Q+
Sbjct: 209 EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQL 268
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 269 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>UNIPROTKB|Q14541 [details] [associations]
symbol:HNF4G "Hepatocyte nuclear factor 4-gamma"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0030522
GO:GO:0031018 GO:GO:0006367 HOVERGEN:HBG005606 eggNOG:NOG241134
HOGENOM:HOG000260822 EMBL:Z49826 EMBL:BX571750 EMBL:AF133504
EMBL:AF133496 EMBL:AF133497 EMBL:AF133498 EMBL:AF133499
EMBL:AF133500 EMBL:AF133501 EMBL:AF133502 EMBL:AF133503
EMBL:AF207953 EMBL:BC105009 EMBL:BC105011 IPI:IPI00291564
IPI:IPI00852837 PIR:JC6095 RefSeq:NP_004124.4 UniGene:Hs.241529
PDB:1LV2 PDBsum:1LV2 ProteinModelPortal:Q14541 SMR:Q14541
STRING:Q14541 PhosphoSite:Q14541 DMDM:160110004 PaxDb:Q14541
PRIDE:Q14541 DNASU:3174 Ensembl:ENST00000354370
Ensembl:ENST00000396423 GeneID:3174 KEGG:hsa:3174 UCSC:uc003yaq.3
CTD:3174 GeneCards:GC08P076370 H-InvDB:HIX0007597 HGNC:HGNC:5026
HPA:HPA005438 MIM:605966 neXtProt:NX_Q14541 PharmGKB:PA29351
InParanoid:Q14541 KO:K08037 OMA:ANYSEVL OrthoDB:EOG4G4GQH
ChEMBL:CHEMBL1961786 ChiTaRS:HNF4G EvolutionaryTrace:Q14541
GenomeRNAi:3174 NextBio:12594 ArrayExpress:Q14541 Bgee:Q14541
CleanEx:HS_HNF4G Genevestigator:Q14541 GermOnline:ENSG00000164749
Uniprot:Q14541
Length = 408
Score = 200 (75.5 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 48/176 (27%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L + +V +
Sbjct: 151 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSM--MYKDILLLGNNYVIHRNSC 208
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + RVL+ +++ F+ + +D E+ACLKA+V F + +GL D ++++N++ Q Q+
Sbjct: 209 EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQI 268
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 269 GLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 324
>ZFIN|ZDB-GENE-990415-242 [details] [associations]
symbol:rxrbb "retinoid x receptor, beta b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-242 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 InterPro:IPR021780 Pfam:PF11825
EMBL:U29941 IPI:IPI00480966 PIR:I50516 RefSeq:NP_571313.1
UniGene:Dr.350 ProteinModelPortal:Q90417 SMR:Q90417 GeneID:30486
KEGG:dre:30486 CTD:30486 NextBio:20806878 ArrayExpress:Q90417
Uniprot:Q90417
Length = 422
Score = 200 (75.5 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 56/192 (29%), Positives = 94/192 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXX----XXXXXXXNAIQWSLPLLESSPLF--NASEHV 56
V+WAK +P F+ +P DQVI +I +L ++ L S H
Sbjct: 229 VEWAKRVPHFSDVPLDDQVILLRAGWNELLIAAFSHRSISVKDEILLATGLHVPKESTHN 288
Query: 57 AAVPN--GKASQTAADV-----RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKD 109
V + S +A+V RVL ++ + R + +D E CL+A+VLF + +GL
Sbjct: 289 LGVEAFFDRESSHSAEVGALFDRVLTELVCKMRDMQMDKTELGCLRAIVLFNPDAKGLTS 348
Query: 110 SLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANT 169
S +VE L+++ L + + +P Q RF +LLL R+I ++H+FF K + NT
Sbjct: 349 SSEVELLREKVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGNT 408
Query: 170 SMEKLLCDMYKN 181
++ L +M ++
Sbjct: 409 PIDTFLMEMLES 420
>UNIPROTKB|F1M9P1 [details] [associations]
symbol:Rxrb "Retinoic acid receptor RXR-beta" species:10116
"Rattus norvegicus" [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001893 "maternal placenta development"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004886 "9-cis retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3611 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0044212 GO:GO:0060038 GeneTree:ENSGT00690000101777
GO:GO:0055012 GO:GO:0004886 IPI:IPI00394256 OMA:FLPERHA
Ensembl:ENSRNOT00000041613 ArrayExpress:F1M9P1 Uniprot:F1M9P1
Length = 522
Score = 202 (76.2 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNA------SEHV 56
V+WAK +P F++LP DQVI + S+ + + L S H
Sbjct: 336 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHS 395
Query: 57 AAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENL 116
A V G + RVL ++ + R + +D E CL+A++LF + +GL + +VE L
Sbjct: 396 AGV--GAIFDRSLS-RVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVEIL 452
Query: 117 QDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+++ L + + +P Q RF +LLL R+I ++H+FF K + +T ++ L
Sbjct: 453 REKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLM 512
Query: 177 DM 178
+M
Sbjct: 513 EM 514
>UNIPROTKB|F1MGG2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:DAAA02038880 IPI:IPI00694519 UniGene:Bt.16536
Ensembl:ENSBTAT00000010892 ArrayExpress:F1MGG2 Uniprot:F1MGG2
Length = 425
Score = 200 (75.5 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 48/176 (27%), Positives = 87/176 (49%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L + +V +
Sbjct: 168 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSM--MYKDILLLGNNYVIHRNSC 225
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + RVL+ +++ F+ + +D E+ACLKA+V F + +GL D ++++N++ Q Q+
Sbjct: 226 EVEISRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPVKIKNMRFQVQL 285
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 286 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 341
>RGD|1310102 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1310102 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 IPI:IPI00869702
Ensembl:ENSRNOT00000011890 Uniprot:F1M342
Length = 364
Score = 198 (74.8 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 48/176 (27%), Positives = 86/176 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L + +V +
Sbjct: 107 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSM--MYKDILLLGNHYVIHRNSC 164
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + RVL+ +++ F+ + +D E+ACLKA+V F + +GL D +++N++ Q Q+
Sbjct: 165 EVEVSRVANRVLDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSDPGKIKNMRFQVQI 224
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 225 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFVKLFGMVKIDNLLQEM 280
>UNIPROTKB|Q7YRQ5 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20153 EMBL:DAAA02036724 EMBL:AY318752 IPI:IPI00691213
RefSeq:NP_001015557.1 UniGene:Bt.107136 SMR:Q7YRQ5 STRING:Q7YRQ5
Ensembl:ENSBTAT00000016078 GeneID:509200 KEGG:bta:509200
InParanoid:Q7YRQ5 NextBio:20868867 Uniprot:Q7YRQ5
Length = 455
Score = 198 (74.8 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 50/176 (28%), Positives = 83/176 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L N P
Sbjct: 190 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPE- 248
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + VR+L+ ++ F+ + +D E+ACLKA++ F + +GL D +++ L+ Q QV
Sbjct: 249 LAEMSRVSVRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 308
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 309 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 364
>UNIPROTKB|Q1I181 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:CU062400
EMBL:DQ061106 RefSeq:NP_001038036.1 UniGene:Ssc.19208 SMR:Q1I181
STRING:Q1I181 Ensembl:ENSSSCT00000008067 GeneID:733636
KEGG:ssc:733636 Uniprot:Q1I181
Length = 474
Score = 198 (74.8 bits), Expect = 4.7e-15, P = 4.7e-15
Identities = 51/176 (28%), Positives = 82/176 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L N P
Sbjct: 199 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIIPRHCPE- 257
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A VR+L+ ++ F+ + VD E+ACLKA++ F + +GL D +++ L+ Q QV
Sbjct: 258 LAEMNRVSVRILDELVLPFQELQVDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 317
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 318 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 373
>UNIPROTKB|F1NCW3 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0003677
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0043433 GeneTree:ENSGT00390000015719 CTD:8431
KO:K08563 OMA:HRTCREA EMBL:AADN02051291 IPI:IPI00585270
RefSeq:NP_001026064.2 UniGene:Gga.7790 ProteinModelPortal:F1NCW3
Ensembl:ENSGALT00000001301 GeneID:768353 KEGG:gga:768353
NextBio:20918610 Uniprot:F1NCW3
Length = 262
Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
Identities = 53/183 (28%), Positives = 86/183 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPL-LESSPLFNASEHVAAVPN 61
+ + KNLPSF LP DQ++ +Q + + +P + E +
Sbjct: 63 ISFMKNLPSFHLLPRGDQLLLLDSCWVPLFLLGLVQEMVTFEVMETPAPSMLEKILLDGQ 122
Query: 62 GKASQTA------ADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVEN 115
K + A V+ L L F + + P E+A LK +LF + GL SL +E+
Sbjct: 123 SKRQEPEWTQPMLAAVQWLQCSLNTFWSLDLSPKEYAYLKGAILFNPDVPGLTASLYIES 182
Query: 116 LQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLL 175
LQ +A+ L + V+ HP RF +LL+TS ++IP A + +FF + N + +L+
Sbjct: 183 LQREAERALQEVVQILHPKDQDRFALILLITSTLKSIPPALITDLFFRPIIGNADIVELI 242
Query: 176 CDM 178
DM
Sbjct: 243 VDM 245
>UNIPROTKB|E2R9S0 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:AAEX03013956
RefSeq:XP_852731.1 ProteinModelPortal:E2R9S0
Ensembl:ENSCAFT00000014977 GeneID:485884 KEGG:cfa:485884
NextBio:20859787 Uniprot:E2R9S0
Length = 474
Score = 195 (73.7 bits), Expect = 1.0e-14, P = 1.0e-14
Identities = 49/176 (27%), Positives = 83/176 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L N P
Sbjct: 199 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPE- 257
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + +R+L+ ++ F+ + +D E+ACLKA++ F + +GL D +++ L+ Q QV
Sbjct: 258 LAEMSRVSMRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 317
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 318 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 373
>FB|FBgn0003720 [details] [associations]
symbol:tll "tailless" species:7227 "Drosophila melanogaster"
[GO:0008293 "torso signaling pathway" evidence=IGI;TAS] [GO:0007362
"terminal region determination" evidence=IGI;NAS;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0045165 "cell fate
commitment" evidence=IMP] [GO:0001748 "optic lobe placode
development" evidence=IMP] [GO:0009948 "anterior/posterior axis
specification" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=NAS] [GO:0007369 "gastrulation"
evidence=NAS] [GO:0001708 "cell fate specification" evidence=TAS]
[GO:0048749 "compound eye development" evidence=NAS] [GO:0003677
"DNA binding" evidence=IDA;NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=TAS] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0035271 "ring gland development" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0055057
"neuroblast division" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0003677 GO:GO:0008293 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003705
GO:GO:0051726 GO:GO:0007369 GO:GO:0001746 GO:GO:0001748
GO:GO:0007362 GO:GO:0035271 GeneTree:ENSGT00700000104390
eggNOG:NOG277339 KO:K08545 OMA:ILLEDAW GO:GO:0055057 EMBL:M34639
EMBL:AF019362 EMBL:BT022195 PIR:A35602 RefSeq:NP_524596.1
UniGene:Dm.1906 ProteinModelPortal:P18102 SMR:P18102 DIP:DIP-19302N
IntAct:P18102 MINT:MINT-300240 STRING:P18102 PRIDE:P18102
EnsemblMetazoa:FBtr0085709 GeneID:43656 KEGG:dme:Dmel_CG1378
UCSC:CG1378-RA CTD:43656 FlyBase:FBgn0003720 InParanoid:P18102
OrthoDB:EOG4PRR6T PhylomeDB:P18102 GenomeRNAi:43656 NextBio:835100
Bgee:P18102 GermOnline:CG1378 Uniprot:P18102
Length = 452
Score = 130 (50.8 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 102 SETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIF 161
+E+RGL +S +V + + A+ L +++ HP+QP RF LL + + S ++ +F
Sbjct: 370 AESRGLLESGKVAAMHNDARSALHNYIQRTHPSQPMRFQTLLGVVQLMHKVSSFTIEELF 429
Query: 162 FAKTVANTSMEKLLCDMY 179
F KT+ + ++ +L+ DMY
Sbjct: 430 FRKTIGDITIVRLISDMY 447
Score = 87 (35.7 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 25/100 (25%), Positives = 45/100 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLF-NASEHVAAVPN 61
V W K++ +F LP DQ++ Q+ +P+ + LF SE+
Sbjct: 244 VNWIKSVRAFTELPMPDQLLLLEESWKEFFILAMAQYLMPMNFAQLLFVYESENANREIM 303
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFK 101
G ++ +V VL + + +D E+ CL+A+ LF+
Sbjct: 304 GMVTR---EVHAFQEVLNQLCHLNIDSTEYECLRAISLFR 340
>FB|FBgn0003964 [details] [associations]
symbol:usp "ultraspiracle" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS;IDA]
[GO:0004884 "ecdysteroid hormone receptor activity"
evidence=NAS;IDA;IPI] [GO:0008232 "activator ecdysone receptor
complex" evidence=IDA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA;IPI] [GO:0008230
"ecdysone receptor holocomplex" evidence=TAS;IPI] [GO:0001077 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IPI] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003677 "DNA binding" evidence=IDA;NAS]
[GO:0007552 "metamorphosis" evidence=NAS] [GO:0045596 "negative
regulation of cell differentiation" evidence=TAS] [GO:0005700
"polytene chromosome" evidence=NAS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0035072
"ecdysone-mediated induction of salivary gland cell autophagic cell
death" evidence=NAS] [GO:0008289 "lipid binding" evidence=IDA]
[GO:0040034 "regulation of development, heterochronic"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005500 "juvenile hormone binding" evidence=TAS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0048813 "dendrite morphogenesis"
evidence=IMP;NAS] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0030425
"dendrite" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0035075 "response to ecdysone" evidence=IMP]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0045892 GO:GO:0045893 GO:GO:0042803
GO:GO:0046872 GO:GO:0030425 EMBL:AE014298 eggNOG:NOG327099
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0016322 GO:GO:0007298 GO:GO:0048813
GO:GO:0007517 EMBL:AL031765 GO:GO:0007281 GO:GO:0046982
GO:GO:0040034 GO:GO:0005700 GO:GO:0035072 PDB:1R0O PDB:2HAN
PDBsum:1R0O PDBsum:2HAN GO:GO:0004884 GO:GO:0045596
GeneTree:ENSGT00690000101777 EMBL:X53417 EMBL:X52591 EMBL:AY069393
EMBL:X53379 PIR:A35872 PIR:T13737 RefSeq:NP_476781.1 UniGene:Dm.25
PDB:1HG4 PDBsum:1HG4 ProteinModelPortal:P20153 SMR:P20153
DIP:DIP-645N IntAct:P20153 MINT:MINT-824030 STRING:P20153
PaxDb:P20153 PRIDE:P20153 EnsemblMetazoa:FBtr0070346
EnsemblMetazoa:FBtr0333803 GeneID:31165 KEGG:dme:Dmel_CG4380
CTD:31165 FlyBase:FBgn0003964 InParanoid:P20153 KO:K14030
OMA:MGDSRDS OrthoDB:EOG45HQD3 PhylomeDB:P20153
EvolutionaryTrace:P20153 GenomeRNAi:31165 NextBio:772247
Bgee:P20153 GermOnline:CG4380 GO:GO:0008230 GO:GO:0005500
Uniprot:P20153
Length = 508
Score = 163 (62.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 32/115 (27%), Positives = 61/115 (53%)
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
KA +A R+L+ + + + + +D E +CLKA++L+ + RG+K ++E +++
Sbjct: 379 KAGVSAIFDRILSELSVKMKRLNLDRRELSCLKAIILYNPDIRGIKSRAEIEMCREKVYA 438
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCD 177
L +H R HP RF +LLL R+I H+F + ++ +E+L +
Sbjct: 439 CLDEHCRLEHPGDDGRFAQLLLRLPALRSISLKCQDHLFLFRITSDRPLEELFLE 493
Score = 53 (23.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
V++A+ +P FA +P DQVI
Sbjct: 293 VEYARMMPHFAQVPLDDQVI 312
>UNIPROTKB|F1NZ15 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005504 "fatty
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006591 "ornithine
metabolic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0007548 "sex differentiation" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0019216 "regulation
of lipid metabolic process" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0050796
"regulation of insulin secretion" evidence=IEA] [GO:0055091
"phospholipid homeostasis" evidence=IEA] [GO:0060395 "SMAD protein
signal transduction" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0008285 GO:GO:0030308 GO:GO:0046872
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 GeneTree:ENSGT00690000101777
OMA:PAFCDLP EMBL:AADN02019318 IPI:IPI00574089
Ensembl:ENSGALT00000006810 ArrayExpress:F1NZ15 Uniprot:F1NZ15
Length = 455
Score = 190 (71.9 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 50/181 (27%), Positives = 88/181 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV + S+ + L N +H+ VP
Sbjct: 190 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSMVFKDVLLLGN--DHI--VPRN 245
Query: 63 -----KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQ 117
+ S+ A +R+L+ ++ F+ + +D E+ACLKA++ F + +GL D +++ ++
Sbjct: 246 CPELVEVSRVA--IRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPSKIKRMR 303
Query: 118 DQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCD 177
Q QV L ++ RFG LLL+ ++I ++ I F K ++ LL +
Sbjct: 304 YQVQVSLEDYINDRQYDSRGRFGELLLLLPVLQSITWQMIEQIQFVKLFGMAKIDNLLQE 363
Query: 178 M 178
M
Sbjct: 364 M 364
>UNIPROTKB|E9PSV4 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4-alpha"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
IPI:IPI01007598 Ensembl:ENSRNOT00000067429 ArrayExpress:E9PSV4
Uniprot:E9PSV4
Length = 351
Score = 187 (70.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F L DQV A + S+ + L N P
Sbjct: 174 VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPE- 232
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + +R+L+ ++ F+ + +D E+ACLKA++ F + +GL D +++ L+ Q QV
Sbjct: 233 LAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 292
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 293 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 348
>ZFIN|ZDB-GENE-980526-436 [details] [associations]
symbol:rxrba "retinoid x receptor, beta a"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-436 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 HOVERGEN:HBG005606 GeneTree:ENSGT00690000101777
EMBL:BX890617 HOGENOM:HOG000260821 GO:GO:0004886 InterPro:IPR021780
Pfam:PF11825 EMBL:AL672176 EMBL:BC054649 EMBL:U29942 EMBL:U93483
IPI:IPI00758810 PIR:I50517 RefSeq:NP_571350.1 UniGene:Dr.351
ProteinModelPortal:Q7SYN5 SMR:Q7SYN5 STRING:Q7SYN5
Ensembl:ENSDART00000009755 Ensembl:ENSDART00000102075 GeneID:30530
KEGG:dre:30530 CTD:30530 InParanoid:Q7SYN5 KO:K08525
NextBio:20806913 ArrayExpress:Q7SYN5 Bgee:Q7SYN5 Uniprot:Q7SYN5
Length = 471
Score = 189 (71.6 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 53/189 (28%), Positives = 89/189 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNA------SEHV 56
V+WAK +P F+ L DQVI + S+ + + L S H
Sbjct: 275 VEWAKRIPHFSELSLDDQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHS 334
Query: 57 AAVPN--GKASQTAADV-----RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKD 109
A V + S A+V RVL ++ + R + +D E CL+A++LF + +GL
Sbjct: 335 AGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSS 394
Query: 110 SLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANT 169
+VE L+++ L + + +P Q RF +LLL R+I ++H+FF K + +T
Sbjct: 395 PSEVELLREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDT 454
Query: 170 SMEKLLCDM 178
++ L +M
Sbjct: 455 PIDTFLMEM 463
>MGI|MGI:1346344 [details] [associations]
symbol:Nr0b2 "nuclear receptor subfamily 0, group B, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0032024 "positive regulation of insulin
secretion" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0042974 "retinoic acid receptor binding"
evidence=ISO] [GO:0042975 "peroxisome proliferator activated
receptor binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0046965 "retinoid X receptor
binding" evidence=ISO] [GO:0046966 "thyroid hormone receptor
binding" evidence=ISO] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
MGI:MGI:1346344 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0043234 GO:GO:0003677 GO:GO:0031100 GO:GO:0009749
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0032024
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0043433
HOGENOM:HOG000231151 GeneTree:ENSGT00390000015719 CTD:8431
eggNOG:NOG235713 HOVERGEN:HBG008136 KO:K08563 OMA:HRTCREA
OrthoDB:EOG4FXR8J EMBL:L76567 EMBL:AY360323 EMBL:AY360324
EMBL:BC019540 IPI:IPI00123317 RefSeq:NP_035980.1 UniGene:Mm.346759
PDB:1YMT PDBsum:1YMT ProteinModelPortal:Q62227 SMR:Q62227
IntAct:Q62227 STRING:Q62227 PhosphoSite:Q62227 PRIDE:Q62227
Ensembl:ENSMUST00000042706 GeneID:23957 KEGG:mmu:23957
InParanoid:Q62227 EvolutionaryTrace:Q62227 NextBio:303792
Bgee:Q62227 CleanEx:MM_NR0B2 Genevestigator:Q62227
GermOnline:ENSMUSG00000037583 Uniprot:Q62227
Length = 260
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 53/187 (28%), Positives = 85/187 (45%)
Query: 3 VKWAKNLPSFAALPFRDQ---------VIXXXXXXXXXXXXNAIQWSLP-LLESSPLFNA 52
V + +NLPSF LP DQ + + +P +L+ L A
Sbjct: 70 VAFLRNLPSFCHLPHEDQRRLLECCWGPLFLLGLAQDAVTFEVAEAPVPSILKKILLEEA 129
Query: 53 SEHV-AAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSL 111
S A P+ + + A V+ L L+ F + + P E+A LK +LF + GL+ S
Sbjct: 130 SSGTQGAQPSDRPQPSLAAVQWLQRCLESFWSLELGPKEYAYLKGTILFNPDVPGLRASC 189
Query: 112 QVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSM 171
+ +LQ +A L + + +PA R R+LLM S +NIP + +FF + + +
Sbjct: 190 HIAHLQQEAHWALCEVLEPWYPASQGRLARILLMASTLKNIPGTLLVDLFFRPIMGDVDI 249
Query: 172 EKLLCDM 178
+LL DM
Sbjct: 250 TELLEDM 256
>UNIPROTKB|E1C7C2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 OMA:ANYSEVL EMBL:AADN02024674
IPI:IPI00583810 ProteinModelPortal:E1C7C2
Ensembl:ENSGALT00000025271 Uniprot:E1C7C2
Length = 454
Score = 187 (70.9 bits), Expect = 6.8e-14, P = 6.8e-14
Identities = 45/176 (25%), Positives = 85/176 (48%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F LP DQV A + S+ + L N ++ +
Sbjct: 198 VEWAKYIPGFCELPLDDQVALLRAHAGEHLLLGAAKRSMAYKDILLLGN--NYIIHRNST 255
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + R+L+ +++ F+ + +D E+ACLKA+V F + +GL + ++++N++ Q Q+
Sbjct: 256 EVEISRVANRILDELVRPFQEIQIDDNEYACLKAIVFFDPDAKGLSNPVKIKNMRYQVQI 315
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I K ++ LL +M
Sbjct: 316 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQLVKLFGIVKIDSLLQEM 371
>MGI|MGI:109128 [details] [associations]
symbol:Hnf4a "hepatic nuclear factor 4, alpha" species:10090
"Mus musculus" [GO:0000062 "fatty-acyl-CoA binding" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006591 "ornithine metabolic process"
evidence=ISO] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0006637 "acyl-CoA metabolic process" evidence=ISO] [GO:0006805
"xenobiotic metabolic process" evidence=ISO] [GO:0007164
"establishment of tissue polarity" evidence=ISO] [GO:0007548 "sex
differentiation" evidence=IMP] [GO:0007596 "blood coagulation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO;IMP] [GO:0010470 "regulation of gastrulation"
evidence=IMP] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=ISO] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0032534 "regulation
of microvillus assembly" evidence=ISO] [GO:0033159 "negative
regulation of protein import into nucleus, translocation"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO;IDA] [GO:0045216 "cell-cell
junction organization" evidence=ISO] [GO:0045722 "positive
regulation of gluconeogenesis" evidence=ISO] [GO:0045723 "positive
regulation of fatty acid biosynthetic process" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=ISO] [GO:0050796 "regulation of insulin
secretion" evidence=IMP] [GO:0055088 "lipid homeostasis"
evidence=ISO] [GO:0055091 "phospholipid homeostasis" evidence=IMP]
[GO:0060395 "SMAD protein signal transduction" evidence=IDA]
[GO:0070328 "triglyceride homeostasis" evidence=IMP] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:2000189
"positive regulation of cholesterol homeostasis" evidence=IMP]
Reactome:REACT_13641 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:109128 GO:GO:0005829
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0006629 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
GO:GO:0050796 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0044212 Reactome:REACT_127416 GO:GO:0000062 GO:GO:0006637
GO:GO:0016290 GO:GO:2000189 GO:GO:0005504 GO:GO:0070328
GO:GO:0006805 GO:GO:0006591 GO:GO:0043433 GO:GO:0030522
GO:GO:0031018 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 HOVERGEN:HBG005606 EMBL:AL591488 GO:GO:0010470
GO:GO:0033159 CTD:3172 eggNOG:NOG241134 KO:K07292 GO:GO:0007164
GO:GO:0032534 EMBL:D29015 EMBL:AY902317 EMBL:AK143948 EMBL:BC039220
EMBL:EF193393 IPI:IPI00230333 IPI:IPI00321964 PIR:S52074
RefSeq:NP_032287.2 UniGene:Mm.202383 ProteinModelPortal:P49698
SMR:P49698 IntAct:P49698 STRING:P49698 PhosphoSite:P49698
PaxDb:P49698 PRIDE:P49698 Ensembl:ENSMUST00000018094
Ensembl:ENSMUST00000109411 GeneID:15378 KEGG:mmu:15378
UCSC:uc008nta.2 UCSC:uc008ntb.1 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 InParanoid:P49698 OMA:PAFCDLP ChiTaRS:HNF4A
NextBio:288038 Bgee:P49698 CleanEx:MM_HNF4A Genevestigator:P49698
GermOnline:ENSMUSG00000017950 Uniprot:P49698
Length = 474
Score = 187 (70.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F L DQV A + S+ + L N P
Sbjct: 199 VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPE- 257
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + +R+L+ ++ F+ + +D E+ACLKA++ F + +GL D +++ L+ Q QV
Sbjct: 258 LAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 317
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 318 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 373
>RGD|2810 [details] [associations]
symbol:Hnf4a "hepatocyte nuclear factor 4, alpha" species:10116
"Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO;IPI] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006591 "ornithine
metabolic process" evidence=ISO] [GO:0006629 "lipid metabolic
process" evidence=ISO] [GO:0006637 "acyl-CoA metabolic process"
evidence=IDA] [GO:0006805 "xenobiotic metabolic process"
evidence=ISO] [GO:0007164 "establishment of tissue polarity"
evidence=IDA] [GO:0007548 "sex differentiation" evidence=ISO]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;IDA] [GO:0009749 "response to glucose
stimulus" evidence=ISO;IDA] [GO:0010470 "regulation of gastrulation"
evidence=ISO] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in regulation
of gene expression" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0032534 "regulation of microvillus assembly"
evidence=IMP] [GO:0033159 "negative regulation of protein import into
nucleus, translocation" evidence=IDA] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045216 "cell-cell junction organization"
evidence=IDA] [GO:0045722 "positive regulation of gluconeogenesis"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0050732 "negative regulation of
peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050796
"regulation of insulin secretion" evidence=ISO] [GO:0051591 "response
to cAMP" evidence=IEP] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0055091 "phospholipid homeostasis" evidence=ISO] [GO:0060395
"SMAD protein signal transduction" evidence=ISO] [GO:0070328
"triglyceride homeostasis" evidence=ISO] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2810
GO:GO:0005737 GO:GO:0008285 GO:GO:0042803 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629 GO:GO:0045722
GO:GO:0042593 GO:GO:0055091 GO:GO:0050796 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0000062 GO:GO:0006637 GO:GO:0016290
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524 GO:GO:0045216
HOVERGEN:HBG005606 GO:GO:0010470 GO:GO:0033159 CTD:3172
eggNOG:NOG241134 KO:K07292 GO:GO:0007164 GO:GO:0032534
HOGENOM:HOG000260822 EMBL:D10554 EMBL:X57133 EMBL:EF193392
IPI:IPI00207142 IPI:IPI00231412 PIR:A36471 PIR:S23502
RefSeq:NP_071516.2 UniGene:Rn.12238 PDB:1M7W PDBsum:1M7W
ProteinModelPortal:P22449 SMR:P22449 IntAct:P22449 STRING:P22449
PhosphoSite:P22449 GeneID:25735 KEGG:rno:25735 InParanoid:P22449
EvolutionaryTrace:P22449 NextBio:607871 ArrayExpress:P22449
Genevestigator:P22449 GermOnline:ENSRNOG00000008895 Uniprot:P22449
Length = 474
Score = 187 (70.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F L DQV A + S+ + L N P
Sbjct: 199 VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPE- 257
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + +R+L+ ++ F+ + +D E+ACLKA++ F + +GL D +++ L+ Q QV
Sbjct: 258 LAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 317
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 318 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 373
>UNIPROTKB|G3V750 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4, alpha, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005504 "fatty acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006591 "ornithine metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006805 "xenobiotic metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0009749 "response to glucose
stimulus" evidence=IEA] [GO:0010470 "regulation of gastrulation"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0055091 "phospholipid homeostasis" evidence=IEA] [GO:0060395
"SMAD protein signal transduction" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 EMBL:CH474005
CTD:3172 KO:K07292 GeneTree:ENSGT00690000101777 RefSeq:NP_071516.2
UniGene:Rn.12238 GeneID:25735 KEGG:rno:25735
Ensembl:ENSRNOT00000011978 Uniprot:G3V750
Length = 474
Score = 187 (70.9 bits), Expect = 7.4e-14, P = 7.4e-14
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F L DQV A + S+ + L N P
Sbjct: 199 VEWAKYIPAFCELLLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPE- 257
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + +R+L+ ++ F+ + +D E+ACLKA++ F + +GL D +++ L+ Q QV
Sbjct: 258 LAEMSRVSIRILDELVLPFQELQIDDNEYACLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 317
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 318 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 373
>UNIPROTKB|P41235 [details] [associations]
symbol:HNF4A "Hepatocyte nuclear factor 4-alpha"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
[GO:0060398 "regulation of growth hormone receptor signaling
pathway" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0030308 "negative regulation of cell growth" evidence=IMP]
[GO:0007596 "blood coagulation" evidence=IDA] [GO:0005102 "receptor
binding" evidence=IDA] [GO:0005504 "fatty acid binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IDA] [GO:0006591 "ornithine metabolic process"
evidence=IMP] [GO:0006805 "xenobiotic metabolic process"
evidence=IMP] [GO:0055088 "lipid homeostasis" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISS] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=ISS] [GO:0001077 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0009749 "response to glucose
stimulus" evidence=ISS] [GO:0050796 "regulation of insulin
secretion" evidence=ISS] [GO:0033613 "activating transcription
factor binding" evidence=ISS] [GO:0055091 "phospholipid
homeostasis" evidence=ISS] [GO:0070328 "triglyceride homeostasis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 EMBL:CH471077 Reactome:REACT_111045
GO:GO:0008285 GO:GO:0042803 GO:GO:0005654 GO:GO:0030154
GO:GO:0030308 GO:GO:0042493 GO:GO:0046872 GO:GO:0007596
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0005102 GO:GO:0006629
GO:GO:0019216 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
Orphanet:552 Pathway_Interaction_DB:hnf3bpathway GO:GO:0050796
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0000062 GO:GO:0006637 GO:GO:0016290 GO:GO:2000189
GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0031018
GO:GO:0051591 GO:GO:0007548 GO:GO:0006367 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 MIM:606391 HOVERGEN:HBG005606 GO:GO:0010470
GO:GO:0033159 GO:GO:0033613 EMBL:X87870 EMBL:X87871 EMBL:X87872
EMBL:Z49825 EMBL:AY680696 EMBL:AY680697 EMBL:AY680698 EMBL:U72969
EMBL:U72959 EMBL:U72961 EMBL:U72962 EMBL:U72963 EMBL:U72964
EMBL:U72965 EMBL:U72966 EMBL:U72967 EMBL:U72968 EMBL:EF591040
EMBL:AL132772 EMBL:BC137539 EMBL:BC137540 EMBL:X76930
IPI:IPI00013196 IPI:IPI00216080 IPI:IPI00300558 IPI:IPI00412368
IPI:IPI00641248 IPI:IPI00645235 IPI:IPI00847265 PIR:JC4937
PIR:JC4938 PIR:JC6096 RefSeq:NP_000448.3 RefSeq:NP_001025174.1
RefSeq:NP_001025175.1 RefSeq:NP_001245284.1 RefSeq:NP_787110.2
RefSeq:NP_849181.1 UniGene:Hs.116462 PDB:1PZL PDB:3CBB PDB:3FS1
PDBsum:1PZL PDBsum:3CBB PDBsum:3FS1 ProteinModelPortal:P41235
SMR:P41235 DIP:DIP-499N IntAct:P41235 MINT:MINT-269829
STRING:P41235 PhosphoSite:P41235 DMDM:148886624 PaxDb:P41235
PRIDE:P41235 Ensembl:ENST00000316099 Ensembl:ENST00000316673
Ensembl:ENST00000415691 Ensembl:ENST00000443598
Ensembl:ENST00000457232 GeneID:3172 KEGG:hsa:3172 UCSC:uc002xlt.3
UCSC:uc002xlu.3 UCSC:uc002xly.3 UCSC:uc002xma.3 CTD:3172
GeneCards:GC20P042984 HGNC:HGNC:5024 HPA:CAB019417 HPA:HPA004712
MIM:125850 MIM:600281 neXtProt:NX_P41235 Orphanet:263455
PharmGKB:PA29349 eggNOG:NOG241134 KO:K07292 BindingDB:P41235
ChEMBL:CHEMBL5398 EvolutionaryTrace:P41235 GenomeRNAi:3172
NextBio:12578 ArrayExpress:P41235 Bgee:P41235 Genevestigator:P41235
GermOnline:ENSG00000101076 GO:GO:0007164 GO:GO:0060398
GO:GO:0032534 Uniprot:P41235
Length = 474
Score = 186 (70.5 bits), Expect = 9.5e-14, P = 9.5e-14
Identities = 48/176 (27%), Positives = 82/176 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV A + S+ + L N P
Sbjct: 199 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPE- 257
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A + +R+L+ ++ F+ + +D E+A LKA++ F + +GL D +++ L+ Q QV
Sbjct: 258 LAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQV 317
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ I F K ++ LL +M
Sbjct: 318 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEM 373
>UNIPROTKB|E1BS38 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00820290 Ensembl:ENSGALT00000033724 Uniprot:E1BS38
Length = 456
Score = 183 (69.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV + S+P + L N P
Sbjct: 190 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSIPYTDFLLLGNDFIIPMHCPEL 249
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ ++ A R+L+ +++ R + +D E+ACLKA++ F + +GL + +V+N++ Q QV
Sbjct: 250 EIARVAT--RILDELVKPLRDIQIDDNEYACLKAIIFFDPDCKGLSEPGKVKNMRFQVQV 307
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RF +LL+ ++I ++ + F K ++ LL +M
Sbjct: 308 NLEDYINDRQYDSRGRFSDILLLLPPLQSITWQMIEQVQFVKLFGVARIDSLLQEM 363
>UNIPROTKB|F1N848 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 OMA:EIEYIAL EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00593954 Ensembl:ENSGALT00000009154
Ensembl:ENSGALT00000039029 Uniprot:F1N848
Length = 459
Score = 183 (69.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 46/176 (26%), Positives = 84/176 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV + S+P + L N P
Sbjct: 200 VEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGVAKRSIPYTDFLLLGNDFIIPMHCPEL 259
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ ++ A R+L+ +++ R + +D E+ACLKA++ F + +GL + +V+N++ Q QV
Sbjct: 260 EIARVAT--RILDELVKPLRDIQIDDNEYACLKAIIFFDPDCKGLSEPGKVKNMRFQVQV 317
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RF +LL+ ++I ++ + F K ++ LL +M
Sbjct: 318 NLEDYINDRQYDSRGRFSDILLLLPPLQSITWQMIEQVQFVKLFGVARIDSLLQEM 373
>UNIPROTKB|F1NRP9 [details] [associations]
symbol:NR0B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006694 "steroid biosynthetic process" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030238
"male sex determination" evidence=IEA] [GO:0030325 "adrenal gland
development" evidence=IEA] [GO:0032448 "DNA hairpin binding"
evidence=IEA] [GO:0033144 "negative regulation of intracellular
steroid hormone receptor signaling pathway" evidence=IEA]
[GO:0033327 "Leydig cell differentiation" evidence=IEA] [GO:0035258
"steroid hormone receptor binding" evidence=IEA] [GO:0042788
"polysomal ribosome" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA] [GO:0050682 "AF-2 domain binding"
evidence=IEA] [GO:0060008 "Sertoli cell differentiation"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0003714 GO:GO:0008104 GO:GO:0030154
GO:GO:0006950 GO:GO:0006694 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003723
GO:GO:0042788 GO:GO:0000122 GO:GO:0043433 GO:GO:0033144
GO:GO:0007530 GO:GO:0045596 GO:GO:0032448 InterPro:IPR025900
Pfam:PF14046 GeneTree:ENSGT00390000015719 EMBL:AADN02011161
IPI:IPI00597241 ProteinModelPortal:F1NRP9
Ensembl:ENSGALT00000026260 OMA:PCFRELP Uniprot:F1NRP9
Length = 263
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 48/187 (25%), Positives = 89/187 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPL--LESS-PLF--------N 51
+++ +N+P F LP +Q++ Q + L +ES+ P
Sbjct: 73 LRFVQNVPCFQELPLDEQLVLVRSCWAPLLVLGLAQERVHLETVESAEPSMLQRILTTRR 132
Query: 52 ASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSL 111
EH A P + +A +++ + G L + + + E+A LK VLF + GL+ +
Sbjct: 133 LGEHAPA-PGRQHPPSAGEIQAIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPGLQCTQ 191
Query: 112 QVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSM 171
+E LQ +AQ L +HVR H ARF +L ++ S ++I + + +FF + + +M
Sbjct: 192 YIEGLQKEAQEALNEHVRLIHRGDQARFAKLNVVLSLLQSINANVIAELFFRPIIGSVNM 251
Query: 172 EKLLCDM 178
+ +L +M
Sbjct: 252 DDMLLEM 258
>ZFIN|ZDB-GENE-080403-1 [details] [associations]
symbol:nr0b2a "nuclear receptor subfamily 0, group B,
member 2a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
ZFIN:ZDB-GENE-080403-1 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000231151 eggNOG:NOG235713 HOVERGEN:HBG008136 KO:K08563
OrthoDB:EOG4FXR8J EMBL:BC058069 IPI:IPI00897501
RefSeq:NP_001243120.1 UniGene:Dr.13394 ProteinModelPortal:Q6PEG7
GeneID:403010 KEGG:dre:403010 CTD:403010 InParanoid:Q6PEG7
ArrayExpress:Q6PEG7 Uniprot:Q6PEG7
Length = 265
Score = 167 (63.8 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 51/185 (27%), Positives = 81/185 (43%)
Query: 3 VKWAKNLPSFAALPFRDQV---------IXXXXXXXXXXXXNAIQWSLPLLESSPLFNAS 53
V + KNLP+F LP +DQ+ + + + P + L +
Sbjct: 80 VYFMKNLPAFQQLPPKDQLKLLQNCWTPLFILGLAQDRVHFQVDESAAPSMLKRILLSGQ 139
Query: 54 EHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQV 113
E A T A V+ L + +F + + P E+A LK V+F + LK SL V
Sbjct: 140 ESAGA---DSEQPTLAGVQTLKSCINKFWSLDLSPKEYAYLKGTVIFNPDVPDLKASLFV 196
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ +AQ L + + +P RF R+LL S ++I + + +FF + + +
Sbjct: 197 EGLQYEAQQALKEVLVPLYPQDGGRFARILLTASTLKSITPSLITELFFRPVIGDAQILD 256
Query: 174 LLCDM 178
LL DM
Sbjct: 257 LLADM 261
>ZFIN|ZDB-GENE-030131-2730 [details] [associations]
symbol:hnf4b "hepatic nuclear factor 4, beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-030131-2730 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 eggNOG:NOG241134 HSSP:P11473
EMBL:BC065657 IPI:IPI00509611 RefSeq:NP_991109.1 UniGene:Dr.6336
ProteinModelPortal:Q6P0E0 SMR:Q6P0E0 GeneID:324010 KEGG:dre:324010
CTD:324010 NextBio:20808536 Uniprot:Q6P0E0
Length = 465
Score = 171 (65.3 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 44/178 (24%), Positives = 82/178 (46%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ V+WAK +P F L D+V + SLP S + ++ + V
Sbjct: 197 LLVEWAKRIPEFCELSVDDRVALLRAHSAEHLILGVARRSLPY--SDIILLGNDFIIPVG 254
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+ + VR+L +++ + + + EF CLK +V F + GL+ + V L+ QA
Sbjct: 255 GSEQEMSKVAVRILEELVRPLKELNITDTEFVCLKTIVFFAPDCPGLQCAQAVRRLRFQA 314
Query: 121 QVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
QV+L + Q RFG LLL+ + +++ ++ + + + S++ LL +M
Sbjct: 315 QVLLDEATSE----QRGRFGELLLLLTTLQSVAWQMLEQLQLMRLLGRASVDSLLMEM 368
>RGD|621032 [details] [associations]
symbol:Nr0b2 "nuclear receptor subfamily 0, group B, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0009749 "response
to glucose stimulus" evidence=IMP] [GO:0019904 "protein domain
specific binding" evidence=IEA;ISO] [GO:0031100 "organ
regeneration" evidence=IEP] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] [GO:0042974 "retinoic acid receptor
binding" evidence=IPI] [GO:0042975 "peroxisome proliferator
activated receptor binding" evidence=IPI] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0046965 "retinoid X
receptor binding" evidence=IPI] [GO:0046966 "thyroid hormone
receptor binding" evidence=IPI] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 RGD:621032 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0043234 GO:GO:0032403 GO:GO:0003677 GO:GO:0031100
GO:GO:0009749 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0032024 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0043433 HOGENOM:HOG000231151 GeneTree:ENSGT00390000015719
CTD:8431 eggNOG:NOG235713 HOVERGEN:HBG008136 KO:K08563 OMA:HRTCREA
OrthoDB:EOG4FXR8J EMBL:D86839 EMBL:D86580 EMBL:BC088117
IPI:IPI00209708 RefSeq:NP_476474.1 UniGene:Rn.10712 PDB:1YP0
PDB:1ZGY PDB:1ZH7 PDBsum:1YP0 PDBsum:1ZGY PDBsum:1ZH7
ProteinModelPortal:P97947 DIP:DIP-46314N STRING:P97947
PhosphoSite:P97947 Ensembl:ENSRNOT00000009683 GeneID:117274
KEGG:rno:117274 UCSC:RGD:621032 InParanoid:P97947
EvolutionaryTrace:P97947 NextBio:620203 Genevestigator:P97947
GermOnline:ENSRNOG00000007229 Uniprot:P97947
Length = 260
Score = 160 (61.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 50/187 (26%), Positives = 78/187 (41%)
Query: 3 VKWAKNLPSFAALPFRDQ---------VIXXXXXXXXXXXXNAIQWSLPLLESSPLFNAS 53
V + +NLPSF LP DQ + + +P + L
Sbjct: 70 VAFLRNLPSFCLLPHEDQRRLLEGCWGPLFLLGLAQDTVTFEVAEAPVPSILKKILLEEP 129
Query: 54 EHVA--AVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSL 111
A A P + A V+ L L+ F + + P E+A LK +LF + GL S
Sbjct: 130 NSGAQGAQPPDPPQPSLAAVQWLQHCLESFWSLELGPKEYAYLKGTILFNPDVPGLHASC 189
Query: 112 QVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSM 171
+ +LQ +A L + + +PA R R+LLM S +NI + +FF + + +
Sbjct: 190 HIAHLQQEAHWALCEVLEPWYPASQGRLARILLMASTLKNISCTLLVDLFFRPVIGDVDI 249
Query: 172 EKLLCDM 178
+LL DM
Sbjct: 250 TELLEDM 256
>ZFIN|ZDB-GENE-060929-100 [details] [associations]
symbol:hnf4g "hepatocyte nuclear factor 4, gamma"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-060929-100 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 EMBL:BX640462 IPI:IPI00919669
ProteinModelPortal:F1QM73 Ensembl:ENSDART00000144193
ArrayExpress:F1QM73 Bgee:F1QM73 Uniprot:F1QM73
Length = 458
Score = 165 (63.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 44/176 (25%), Positives = 81/176 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P+F LP DQV + S+ + L N P
Sbjct: 201 VEWAKYIPAFGELPLDDQVSLLRAHAGEHLLLGVAKRSMSYKDLLLLGNGCVIHRNCPEP 260
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + + RVL+ ++ F+ + +D E+A LKA+V F + + L+D +++ ++ Q Q+
Sbjct: 261 EIGRVSN--RVLDELVLPFQDIQIDDNEYAALKAIVFFDPDAKSLRDPSKIKAMRYQVQM 318
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L ++ RFG LLL+ ++I ++ + F K ++ LL +M
Sbjct: 319 SLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQLQFIKLFGLAKIDNLLQEM 374
>ZFIN|ZDB-GENE-040616-4 [details] [associations]
symbol:esrrgb "estrogen-related receptor gamma b"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-4 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
EMBL:BX004824 IPI:IPI00502886 Ensembl:ENSDART00000122258
ArrayExpress:F1QRG9 Bgee:F1QRG9 Uniprot:F1QRG9
Length = 444
Score = 164 (62.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 45/177 (25%), Positives = 77/177 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F++L DQ+ SLP + LF A +++
Sbjct: 266 ISWAKHIPGFSSLSLSDQMSLLQSAWMEILVLRVAFRSLPC-DDRLLF-ADDYIMDAEQA 323
Query: 63 K-ASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQ 121
K A +L +++R+R + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 324 KCAGLLELHTAILQ-LVRRYRCMSLEREEFVTLKAIALANSDSMHIEDVEAVQGLQDALH 382
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + HH P R G+L++ R + V+H K M KL ++
Sbjct: 383 EALLDYECVHHSEDPRRAGKLIMTLPLLRQTSAKAVRHFCSIKQDGRVPMHKLFLEL 439
>FB|FBgn0004914 [details] [associations]
symbol:Hnf4 "Hepatocyte nuclear factor 4" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0007498 "mesoderm
development" evidence=NAS] [GO:0007492 "endoderm development"
evidence=NAS] [GO:0008610 "lipid biosynthetic process"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016042 "lipid catabolic process" evidence=IDA]
[GO:0034440 "lipid oxidation" evidence=IDA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
EMBL:AE014134 GO:GO:0016042 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 EMBL:U70874 PIR:S36218
RefSeq:NP_723414.1 UniGene:Dm.4524 ProteinModelPortal:P49866
SMR:P49866 MINT:MINT-1331960 STRING:P49866 PaxDb:P49866
EnsemblMetazoa:FBtr0079749 GeneID:44544 KEGG:dme:Dmel_CG9310
CTD:44544 FlyBase:FBgn0004914 InParanoid:P49866 KO:K08704
OrthoDB:EOG4Z08MV GenomeRNAi:44544 NextBio:837399 Bgee:P49866
GermOnline:CG9310 GO:GO:0034440 Uniprot:P49866
Length = 666
Score = 166 (63.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 49/182 (26%), Positives = 84/182 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN---ASEHVA-- 57
V+WAK +P+F L DQV + S+ L + L N + H
Sbjct: 249 VEWAKQIPAFNELQLDDQVALLRAHAGEHLLLGLSRRSMHLKDVLLLSNNCVITRHCPDP 308
Query: 58 -AVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENL 116
PN S+ A R+++ ++ + VG+D EFAC+KA+V F +GL + ++++L
Sbjct: 309 LVSPNLDISRIGA--RIIDELVTVMKDVGIDDTEFACIKALVFFDPNAKGLNEPHRIKSL 366
Query: 117 QDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+ Q L ++ RFG +LL+ ++I ++ I FAK ++ LL
Sbjct: 367 RHQILNNLEDYISDRQYESRGRFGEILLILPVLQSITWQMIEQIQFAKIFGVAHIDSLLQ 426
Query: 177 DM 178
+M
Sbjct: 427 EM 428
>UNIPROTKB|F6V776 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:EDRHLGS Ensembl:ENSCAFT00000027147
EMBL:AAEX03005862 EMBL:AAEX03005860 EMBL:AAEX03005861
Uniprot:F6V776
Length = 438
Score = 163 (62.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SLP L A +++ +
Sbjct: 260 IGWAKHIPGFSNLSLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLVYAEDYIMDEEHS 317
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + R + +++R++ + V+ EF LKA+ L S++ ++D V+ LQD
Sbjct: 318 RLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHE 377
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 378 ALQDYELSQRHEEPRRTGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEM 433
>UNIPROTKB|E2QSQ7 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
Ensembl:ENSCAFT00000027147 Uniprot:E2QSQ7
Length = 441
Score = 163 (62.4 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SLP L A +++ +
Sbjct: 255 IGWAKHIPGFSNLSLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLVYAEDYIMDEEHS 312
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + R + +++R++ + V+ EF LKA+ L S++ ++D V+ LQD
Sbjct: 313 RLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHE 372
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 373 ALQDYELSQRHEEPRRTGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEM 428
>UNIPROTKB|E7EWD9 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC008050
EMBL:AC016543 HGNC:HGNC:3473 ChiTaRS:ESRRB IPI:IPI00965112
ProteinModelPortal:E7EWD9 SMR:E7EWD9 Ensembl:ENST00000512784
ArrayExpress:E7EWD9 Bgee:E7EWD9 Uniprot:E7EWD9
Length = 508
Score = 164 (62.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F++L DQ+ + SLP L A +++ +
Sbjct: 260 IGWAKHIPGFSSLSLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLVYAEDYIMDEEHS 317
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + R + +++R++ + V+ EF LKA+ L S++ ++D V+ LQD
Sbjct: 318 RLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHE 377
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 378 ALQDYELSQRHEEPWRTGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEM 433
>UNIPROTKB|O95718 [details] [associations]
symbol:ESRRB "Steroid hormone receptor ERR2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0019827
"stem cell maintenance" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0001892
"embryonic placenta development" evidence=NAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000980 "RNA polymerase II distal enhancer sequence-specific
DNA binding" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005654 GO:GO:0005496 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000980 GO:GO:0003713
GO:GO:0008134 GO:GO:0006367 GO:GO:0019827 Orphanet:90636
GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 EMBL:AF094517 EMBL:AY451389 EMBL:AY451390
EMBL:AB307714 EMBL:HQ692852 EMBL:AC008050 EMBL:AC016543
EMBL:BC131517 IPI:IPI00032812 RefSeq:NP_004443.3 UniGene:Hs.435845
PDB:1LO1 PDBsum:1LO1 ProteinModelPortal:O95718 SMR:O95718
STRING:O95718 PhosphoSite:O95718 PaxDb:O95718 PRIDE:O95718
DNASU:2103 Ensembl:ENST00000261532 Ensembl:ENST00000380887
Ensembl:ENST00000505752 Ensembl:ENST00000509242
Ensembl:ENST00000556177 GeneID:2103 KEGG:hsa:2103 CTD:2103
GeneCards:GC14P076837 HGNC:HGNC:3473 MIM:602167 MIM:608565
neXtProt:NX_O95718 PharmGKB:PA27889 KO:K08553 OMA:EDRHLGS
OrthoDB:EOG479F71 BindingDB:O95718 ChEMBL:CHEMBL3751 ChiTaRS:ESRRB
EvolutionaryTrace:O95718 GenomeRNAi:2103 NextBio:8507
ArrayExpress:O95718 Bgee:O95718 CleanEx:HS_ESRRB
Genevestigator:O95718 GermOnline:ENSG00000119715 GO:GO:0001834
Uniprot:O95718
Length = 508
Score = 164 (62.8 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 44/176 (25%), Positives = 78/176 (44%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F++L DQ+ + SLP L A +++ +
Sbjct: 255 IGWAKHIPGFSSLSLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLVYAEDYIMDEEHS 312
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + R + +++R++ + V+ EF LKA+ L S++ ++D V+ LQD
Sbjct: 313 RLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHE 372
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 373 ALQDYELSQRHEEPWRTGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEM 428
>UNIPROTKB|F1N0K9 [details] [associations]
symbol:LOC100852315 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:DAAA02029654 EMBL:DAAA02029655
IPI:IPI00690687 ProteinModelPortal:F1N0K9
Ensembl:ENSBTAT00000016290 Uniprot:F1N0K9
Length = 478
Score = 162 (62.1 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SLP L A +++ +
Sbjct: 300 IGWAKHIPGFSNLSLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLVYAEDYIMDEEHS 357
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + R + +++R++ + V+ EF LKA+ L S++ ++D V+ LQD
Sbjct: 358 RLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHE 417
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 418 ALQDYELSQRHEEPRRTGKLLLTLPLLRQTAAKAVQHFYSIKLQGKVPMHKLFLEM 473
>UNIPROTKB|G5E5I7 [details] [associations]
symbol:NR0B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060008 "Sertoli cell differentiation" evidence=IEA]
[GO:0050682 "AF-2 domain binding" evidence=IEA] [GO:0045596
"negative regulation of cell differentiation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042788 "polysomal
ribosome" evidence=IEA] [GO:0035258 "steroid hormone receptor
binding" evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0033144 "negative regulation of intracellular
steroid hormone receptor signaling pathway" evidence=IEA]
[GO:0032448 "DNA hairpin binding" evidence=IEA] [GO:0030325
"adrenal gland development" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006950 "response to stress"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0008104 GO:GO:0006950 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0043433
GO:GO:0033144 GO:GO:0060008 GO:GO:0030238 GO:GO:0045596
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 CTD:190 KO:K08562
OMA:CCFCGED GeneTree:ENSGT00390000015719 EMBL:DAAA02073850
RefSeq:NP_001192786.1 UniGene:Bt.13026 Ensembl:ENSBTAT00000020641
GeneID:281949 KEGG:bta:281949 NextBio:20805825 Uniprot:G5E5I7
Length = 471
Score = 143 (55.4 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 34/112 (30%), Positives = 57/112 (50%)
Query: 67 TAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQ 126
+AA+V+ + G L + R + + E+A LK VLF + GL+ ++ LQ Q +L++
Sbjct: 355 SAAEVQTIKGFLAKCRSLDITTKEYAYLKGTVLFNPDLPGLQCVKYIQGLQWGTQQILSE 414
Query: 127 HVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
HVR H ARF L R I + + +FF + SM+ ++ +M
Sbjct: 415 HVRMTHGVYRARFAELNSALFLLRFISANTLAELFFRPIIGTVSMDDMMLEM 466
Score = 40 (19.1 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 267 LRFVKYLPCFQVLPLDQQLV 286
>UNIPROTKB|F1S2P9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0001834 "trophectodermal cell
proliferation" evidence=IEA] [GO:0001831 "trophectodermal cellular
morphogenesis" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 GeneTree:ENSGT00700000104391
OMA:EDRHLGS GO:GO:0001834 EMBL:CT757460 Ensembl:ENSSSCT00000002655
Uniprot:F1S2P9
Length = 504
Score = 162 (62.1 bits), Expect = 4.3e-11, P = 4.3e-11
Identities = 44/176 (25%), Positives = 77/176 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SLP L A +++ +
Sbjct: 255 IGWAKHIPGFSNLSLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLVYAEDYIMDEEHS 312
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + R + +++R++ + V+ EF LKA+ L S++ ++D V+ LQD
Sbjct: 313 RLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSDSMYIEDLEAVQKLQDLLHE 372
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 373 ALQDYELSQRHEEPRRTGKLLLTLPLLRQTAAKAVQHFYSIKLQGKVPMHKLFLEM 428
>RGD|1359557 [details] [associations]
symbol:Esrrb "estrogen-related receptor beta" species:10116
"Rattus norvegicus" [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA;ISO]
[GO:0001834 "trophectodermal cell proliferation" evidence=IEA;ISO]
[GO:0001892 "embryonic placenta development" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1359557
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0001892
GO:GO:0019827 GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 CTD:2103 KO:K08553
OMA:EDRHLGS OrthoDB:EOG479F71 GO:GO:0001834 EMBL:X51417
EMBL:AY383731 IPI:IPI00194043 RefSeq:NP_001008516.2
UniGene:Rn.104984 ProteinModelPortal:P11475 SMR:P11475
STRING:P11475 PhosphoSite:P11475 PRIDE:P11475
Ensembl:ENSRNOT00000013867 GeneID:299210 KEGG:rno:299210
UCSC:RGD:1359557 InParanoid:P11475 NextBio:645036
Genevestigator:P11475 Uniprot:P11475
Length = 433
Score = 156 (60.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 43/176 (24%), Positives = 76/176 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SLP L A +++ +
Sbjct: 255 ISWAKHIPGFSNLTLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLAYAEDYIMDEEHS 312
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ R + +++R++ + V+ EF LKA+ L S++ +++ V+ LQD
Sbjct: 313 RLVGLLELYRAILQLVRRYKKLKVEKEEFVMLKALALANSDSMYIENLEAVQKLQDLLHE 372
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 373 ALQDYELSQRHEEPRRAGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEM 428
>UNIPROTKB|F1NBB9 [details] [associations]
symbol:ESRRB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001831
"trophectodermal cellular morphogenesis" evidence=IEA] [GO:0001834
"trophectodermal cell proliferation" evidence=IEA] [GO:0001892
"embryonic placenta development" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104391
OMA:EDRHLGS EMBL:AADN02003482 EMBL:AADN02003483 IPI:IPI00811660
Ensembl:ENSGALT00000016888 Uniprot:F1NBB9
Length = 438
Score = 156 (60.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 43/176 (24%), Positives = 77/176 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SLP + L A +++ +
Sbjct: 260 IGWAKHIPGFSNLSLGDQMSLLQSAWMEILILGIVYRSLPYEDK--LVYAEDYIMDEEHS 317
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ + + +++R++ + V+ EF LKA+ L S++ ++D V+ LQD
Sbjct: 318 RLTGLLELYLAILQLVRRYKKLKVEKEEFVTLKALALANSDSMHIEDMDAVQKLQDLLHE 377
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 378 ALQDYELSQRNEEPRRAGKLLLTLPLLRQTAAKAVQHFYSIKLQGKVPMHKLFLEM 433
>MGI|MGI:1346832 [details] [associations]
symbol:Esrrb "estrogen related receptor, beta" species:10090
"Mus musculus" [GO:0000980 "RNA polymerase II distal enhancer
sequence-specific DNA binding" evidence=IDA] [GO:0001701 "in utero
embryonic development" evidence=IMP] [GO:0001831 "trophectodermal
cellular morphogenesis" evidence=IMP] [GO:0001834 "trophectodermal
cell proliferation" evidence=IMP] [GO:0001892 "embryonic placenta
development" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019827 "stem cell maintenance" evidence=IMP] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:1346832 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0000980 GO:GO:0003713 GO:GO:0001892 GO:GO:0019827
GO:GO:0001831 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 CTD:2103 KO:K08553
OrthoDB:EOG479F71 GO:GO:0001834 EMBL:X89594 EMBL:S82458
EMBL:AK052256 EMBL:AC126685 EMBL:AC132189 EMBL:BC132595
EMBL:BC132597 IPI:IPI00874774 IPI:IPI01026653 PIR:S58087
RefSeq:NP_001152972.1 RefSeq:NP_036064.3 UniGene:Mm.235550
ProteinModelPortal:Q61539 DIP:DIP-46110N IntAct:Q61539
STRING:Q61539 PhosphoSite:Q61539 PRIDE:Q61539
Ensembl:ENSMUST00000021680 Ensembl:ENSMUST00000167891 GeneID:26380
KEGG:mmu:26380 InParanoid:Q61539 NextBio:304293 CleanEx:MM_ESRRB
Genevestigator:Q61539 GermOnline:ENSMUSG00000021255 Uniprot:Q61539
Length = 433
Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 43/176 (24%), Positives = 76/176 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F +L DQ+ + SLP L A +++ +
Sbjct: 255 INWAKHIPGFPSLTLGDQMSLLQSAWMEILILGIVYRSLPY--DDKLAYAEDYIMDEEHS 312
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
+ R + +++R++ + V+ EF LKA+ L S++ +++ V+ LQD
Sbjct: 313 RLVGLLDLYRAILQLVRRYKKLKVEKEEFMILKALALANSDSMYIENLEAVQKLQDLLHE 372
Query: 123 MLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + +P R G+LLL R + VQH + K M KL +M
Sbjct: 373 ALQDYELSQRHEEPRRAGKLLLTLPLLRQTAAKAVQHFYSVKLQGKVPMHKLFLEM 428
>UNIPROTKB|Q15466 [details] [associations]
symbol:NR0B2 "Nuclear receptor subfamily 0 group B member
2" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0009749 "response to glucose stimulus"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0032024 "positive regulation of insulin secretion"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042975 "peroxisome proliferator activated receptor binding"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0046965 "retinoid X receptor binding" evidence=IEA] [GO:0046966
"thyroid hormone receptor binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0030521 "androgen receptor signaling pathway" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=IDA] [GO:0008203 "cholesterol metabolic process"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005737 GO:GO:0003714 GO:GO:0043234 GO:GO:0005654
GO:GO:0003677 GO:GO:0031100 GO:GO:0009749 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0008203 GO:GO:0032024
GO:GO:0003700 GO:GO:0000122 GO:GO:0043433 MIM:601665 PDB:2Z4J
PDBsum:2Z4J GO:GO:0006367 EMBL:AL356390 HOGENOM:HOG000231151
EMBL:L76571 EMBL:AB058644 EMBL:BC030207 IPI:IPI00017483
RefSeq:NP_068804.1 UniGene:Hs.427055 PDB:1YUC PDB:2Q3Y PDB:4DOR
PDBsum:1YUC PDBsum:2Q3Y PDBsum:4DOR ProteinModelPortal:Q15466
SMR:Q15466 DIP:DIP-46313N IntAct:Q15466 STRING:Q15466
PhosphoSite:Q15466 DMDM:9978744 PRIDE:Q15466 DNASU:8431
Ensembl:ENST00000254227 GeneID:8431 KEGG:hsa:8431 UCSC:uc001bnf.3
CTD:8431 GeneCards:GC01M027237 HGNC:HGNC:7961 MIM:604630
neXtProt:NX_Q15466 PharmGKB:PA31747 eggNOG:NOG235713
HOVERGEN:HBG008136 InParanoid:Q15466 KO:K08563 OMA:HRTCREA
OrthoDB:EOG4FXR8J PhylomeDB:Q15466 ChEMBL:CHEMBL5603
EvolutionaryTrace:Q15466 GenomeRNAi:8431 NextBio:31546
ArrayExpress:Q15466 Bgee:Q15466 CleanEx:HS_NR0B2
Genevestigator:Q15466 GermOnline:ENSG00000131910 Uniprot:Q15466
Length = 257
Score = 149 (57.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 49/188 (26%), Positives = 85/188 (45%)
Query: 3 VKWAKNLPSFAALPFRDQ---------VIXXXXXXXXXXXXNAIQWSLPLLESSPLF--- 50
V + +NLPSF LP +DQ + + +P + L
Sbjct: 67 VAFLRNLPSFWQLPPQDQRRLLQGCWGPLFLLGLAQDAVTFEVAEAPVPSILKKILLEEP 126
Query: 51 NASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDS 110
++S +P+ AA V+ L L+ F + + P E+ACLK +LF + GL+ +
Sbjct: 127 SSSGGSGQLPDRPQPSLAA-VQWLQCCLESFWSLELSPKEYACLKGTILFNPDVPGLQAA 185
Query: 111 LQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTS 170
+ +LQ +A +L + + PA R R+LL S ++IP++ + +FF + +
Sbjct: 186 SHIGHLQQEAHWVLCEVLEPWCPAAQGRLTRVLLTASTLKSIPTSLLGDLFFRPIIGDVD 245
Query: 171 MEKLLCDM 178
+ LL DM
Sbjct: 246 IAGLLGDM 253
>UNIPROTKB|F1NBB5 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107
IPI:IPI00579920 ProteinModelPortal:F1NBB5
Ensembl:ENSGALT00000016889 ArrayExpress:F1NBB5 Uniprot:F1NBB5
Length = 393
Score = 152 (58.6 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 217 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYAEDYIM---DE 271
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 272 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 331
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 332 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 390
>UNIPROTKB|F1SA88 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 OMA:RMSSKDR EMBL:CU463901
EMBL:CU929762 ProteinModelPortal:F1SA88 SMR:F1SA88
Ensembl:ENSSSCT00000011830 Uniprot:F1SA88
Length = 396
Score = 152 (58.6 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 218 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 272
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 273 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 332
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 333 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 391
>UNIPROTKB|Q5UKY7 [details] [associations]
symbol:ESRRG "Nuclear receptor subfamily 3 group B member
3" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005496
"steroid binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 CTD:2104 KO:K08554 EMBL:AADN02012104
EMBL:AADN02012105 EMBL:AADN02012106 EMBL:AADN02012107 EMBL:AY702438
IPI:IPI00601951 RefSeq:NP_001007082.1 UniGene:Gga.11217 SMR:Q5UKY7
STRING:Q5UKY7 Ensembl:ENSGALT00000015707 GeneID:421357
KEGG:gga:421357 InParanoid:Q5UKY7 NextBio:20824134 Uniprot:Q5UKY7
Length = 435
Score = 152 (58.6 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 257 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYAEDYIM---DE 311
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 312 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 371
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 372 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 430
>UNIPROTKB|J9NWD9 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AAEX03018324 GeneID:478961
KEGG:cfa:478961 RefSeq:XP_003434352.1 ProteinModelPortal:J9NWD9
Ensembl:ENSCAFT00000046515 Uniprot:J9NWD9
Length = 435
Score = 152 (58.6 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 257 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 311
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 312 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 371
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 372 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 430
>UNIPROTKB|E1BC39 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00700000104391 GO:GO:0003708
OMA:RMSSKDR EMBL:DAAA02042485 EMBL:DAAA02042486 EMBL:DAAA02042487
IPI:IPI00685955 Ensembl:ENSBTAT00000061126 Uniprot:E1BC39
Length = 450
Score = 152 (58.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 272 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 326
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 327 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 386
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 387 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 445
>UNIPROTKB|E2R7U1 [details] [associations]
symbol:ESRRG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00700000104391
CTD:2104 KO:K08554 GO:GO:0003708 OMA:RMSSKDR EMBL:AAEX03018324
RefSeq:XP_849276.1 ProteinModelPortal:E2R7U1
Ensembl:ENSCAFT00000017132 GeneID:478961 KEGG:cfa:478961
BindingDB:E2R7U1 NextBio:20854219 Uniprot:E2R7U1
Length = 458
Score = 152 (58.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 280 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 334
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 335 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 394
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 395 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 453
>UNIPROTKB|P62508 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0050682 "AF-2 domain binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0045893 GO:GO:0005654 EMBL:CH471100 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006367
DrugBank:DB00255 eggNOG:NOG282629 HOVERGEN:HBG108344 EMBL:AF094518
EMBL:AB020639 EMBL:AF058291 EMBL:AY388456 EMBL:AY388457
EMBL:AY388458 EMBL:AY388459 EMBL:AY388460 EMBL:AY388461
EMBL:AK131193 EMBL:AK290945 EMBL:AK291028 EMBL:AK291647
EMBL:CR749497 EMBL:AY528719 EMBL:AL445650 EMBL:AL512650
EMBL:AC096635 EMBL:AC096634 EMBL:AL391216 EMBL:AL512626
EMBL:AL513312 EMBL:AL603752 EMBL:BC008218 EMBL:BC064700
EMBL:AF117255 IPI:IPI00025743 IPI:IPI00427737 IPI:IPI00554597
IPI:IPI00940244 RefSeq:NP_001127757.1 RefSeq:NP_001230434.1
RefSeq:NP_001230435.1 RefSeq:NP_001230436.1 RefSeq:NP_001230438.1
RefSeq:NP_001230439.1 RefSeq:NP_001230440.1 RefSeq:NP_001230441.1
RefSeq:NP_001230442.1 RefSeq:NP_001230443.1 RefSeq:NP_001230444.1
RefSeq:NP_001230447.1 RefSeq:NP_001230448.1 RefSeq:NP_001429.2
RefSeq:NP_996317.1 RefSeq:NP_996318.1 UniGene:Hs.444225
UniGene:Hs.738938 PDB:1KV6 PDB:1TFC PDB:1VJB PDB:2E2R PDB:2EWP
PDB:2GP7 PDB:2GPO PDB:2GPP PDB:2GPU PDB:2GPV PDB:2P7A PDB:2P7G
PDB:2P7Z PDB:2ZAS PDB:2ZBS PDB:2ZKC PDBsum:1KV6 PDBsum:1TFC
PDBsum:1VJB PDBsum:2E2R PDBsum:2EWP PDBsum:2GP7 PDBsum:2GPO
PDBsum:2GPP PDBsum:2GPU PDBsum:2GPV PDBsum:2P7A PDBsum:2P7G
PDBsum:2P7Z PDBsum:2ZAS PDBsum:2ZBS PDBsum:2ZKC
ProteinModelPortal:P62508 SMR:P62508 IntAct:P62508
MINT:MINT-4824700 STRING:P62508 PhosphoSite:P62508 DMDM:50402102
PRIDE:P62508 DNASU:2104 Ensembl:ENST00000359162
Ensembl:ENST00000360012 Ensembl:ENST00000361395
Ensembl:ENST00000361525 Ensembl:ENST00000366938
Ensembl:ENST00000366940 Ensembl:ENST00000391890
Ensembl:ENST00000408911 Ensembl:ENST00000463665
Ensembl:ENST00000487276 Ensembl:ENST00000493603
Ensembl:ENST00000493748 GeneID:2104 KEGG:hsa:2104 UCSC:uc001hkw.2
CTD:2104 GeneCards:GC01M216676 HGNC:HGNC:3474 HPA:HPA044678
MIM:602969 neXtProt:NX_P62508 PharmGKB:PA27891 InParanoid:P62508
KO:K08554 BindingDB:P62508 ChEMBL:CHEMBL4245 ChiTaRS:ESRRG
EvolutionaryTrace:P62508 GenomeRNAi:2104 NextBio:8511
ArrayExpress:P62508 Bgee:P62508 Genevestigator:P62508
GermOnline:ENSG00000196482 GO:GO:0050682 GO:GO:0003708
Uniprot:P62508
Length = 458
Score = 152 (58.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 280 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 334
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 335 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 394
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 395 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 453
>MGI|MGI:1347056 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=NAS] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0007275 "multicellular organismal development"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=NAS] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1347056
GO:GO:0007275 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496
GO:GO:0046872 GO:GO:0003677 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0005516 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71
CTD:2104 KO:K08554 GO:GO:0003708 EMBL:AF117254 EMBL:AB093266
EMBL:AK052731 EMBL:BC082324 IPI:IPI00453754 IPI:IPI00468998
RefSeq:NP_001230721.1 RefSeq:NP_036065.1 UniGene:Mm.388156
UniGene:Mm.421613 UniGene:Mm.89989 PDB:1S9P PDB:1S9Q PDBsum:1S9P
PDBsum:1S9Q ProteinModelPortal:P62509 SMR:P62509 IntAct:P62509
STRING:P62509 PhosphoSite:P62509 PRIDE:P62509
Ensembl:ENSMUST00000027906 Ensembl:ENSMUST00000110938
Ensembl:ENSMUST00000110939 GeneID:26381 KEGG:mmu:26381
UCSC:uc007eaa.1 UCSC:uc007eab.1 InParanoid:P62509 OMA:RMSSKDR
BindingDB:P62509 NextBio:304297 Bgee:P62509 CleanEx:MM_ESRRG
Genevestigator:P62509 GermOnline:ENSMUSG00000026610 Uniprot:P62509
Length = 458
Score = 152 (58.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 280 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 334
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 335 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 394
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 395 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 453
>RGD|1303236 [details] [associations]
symbol:Esrrg "estrogen-related receptor gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0050682 "AF-2 domain binding"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:1303236
GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 DrugBank:DB00255 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344
GeneTree:ENSGT00700000104391 OrthoDB:EOG479F71 CTD:2104 KO:K08554
GO:GO:0050682 GO:GO:0003708 OMA:RMSSKDR EMBL:AB126962 EMBL:AB126963
EMBL:AY341057 IPI:IPI00421426 IPI:IPI00454520 RefSeq:NP_976081.1
UniGene:Rn.214491 ProteinModelPortal:P62510 SMR:P62510
STRING:P62510 PhosphoSite:P62510 PRIDE:P62510
Ensembl:ENSRNOT00000003489 GeneID:360896 KEGG:rno:360896
UCSC:RGD:1303236 InParanoid:P62510 BindingDB:P62510 NextBio:674519
Genevestigator:P62510 GermOnline:ENSRNOG00000002593 Uniprot:P62510
Length = 458
Score = 152 (58.6 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 280 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 334
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 335 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 394
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 395 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 453
>UNIPROTKB|F8W8J3 [details] [associations]
symbol:ESRRG "Estrogen-related receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:AL445650 EMBL:AL512650 EMBL:AC096635 EMBL:AC096634
EMBL:AL391216 EMBL:AL512626 EMBL:AL513312 EMBL:AL603752
IPI:IPI00554597 RefSeq:NP_001230447.1 UniGene:Hs.444225
UniGene:Hs.738938 DNASU:2104 GeneID:2104 KEGG:hsa:2104 CTD:2104
HGNC:HGNC:3474 KO:K08554 ChiTaRS:ESRRG GenomeRNAi:2104 NextBio:8511
GO:GO:0003708 OMA:RMSSKDR ProteinModelPortal:F8W8J3 SMR:F8W8J3
Ensembl:ENST00000366937 UCSC:uc001hkx.2 ArrayExpress:F8W8J3
Bgee:F8W8J3 Uniprot:F8W8J3
Length = 470
Score = 152 (58.6 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 292 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILGVVYRSLSFEDE--LVYADDYIM---DE 346
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 347 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 406
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G++L+ R + VQH + K M KL +M
Sbjct: 407 LHEALQDYEAGQHMEDPRRAGKMLMTLPLLRQTSTKAVQHFYNIKLEGKVPMHKLFLEM 465
>UNIPROTKB|K7GQM0 [details] [associations]
symbol:RXRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GeneTree:ENSGT00690000101777
EMBL:CT737383 Ensembl:ENSSSCT00000035096 Uniprot:K7GQM0
Length = 388
Score = 150 (57.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 254 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 312
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 313 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 372
Query: 123 MLAQHVRTHHPAQPAR 138
L + + +P Q R
Sbjct: 373 SLETYCKQKYPEQQGR 388
>ZFIN|ZDB-GENE-070130-1 [details] [associations]
symbol:nr0b1 "nuclear receptor subfamily 0, group B,
member 1" species:7955 "Danio rerio" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0030104 "water homeostasis"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
ZFIN:ZDB-GENE-070130-1 GO:GO:0005634 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0030104 GeneTree:ENSGT00390000015719 EMBL:CR352256
IPI:IPI00774565 ProteinModelPortal:F1QNF1
Ensembl:ENSDART00000128468 Uniprot:F1QNF1
Length = 292
Score = 147 (56.8 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 48/186 (25%), Positives = 81/186 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+K+ KN+P F LP DQ Q + E+S S + +G
Sbjct: 105 LKFVKNVPCFRELPADDQHTLVRSGWAPLLVLGMAQDRIDF-ETSETQEPSMLQRILTSG 163
Query: 63 KASQ---------TAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQV 113
+ Q DV+ + L++ + + E+A LK +LF + GL+ +
Sbjct: 164 QDKQDNQSHNGGVALTDVQGIKMFLRKCWGLDISTKEYAYLKGAILFNPDVAGLQCQHYI 223
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
+ LQ +A L ++V+ H ARF +L L S R+I + V +FF + +ME+
Sbjct: 224 QALQSEANQALNEYVKMIHRGDSARFAKLFLALSMLRSINANVVAGLFFKPVIGAVNMEE 283
Query: 174 LLCDMY 179
LL +M+
Sbjct: 284 LLLEMF 289
>UNIPROTKB|P79386 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9823 "Sus scrofa" [GO:0016020 "membrane" evidence=ISS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISS]
[GO:0032448 "DNA hairpin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:0042788
"polysomal ribosome" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008406 "gonad
development" evidence=ISS] [GO:0006694 "steroid biosynthetic
process" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0035258 "steroid hormone receptor
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0008104 "protein localization" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0060008 "Sertoli cell
differentiation" evidence=IEA] [GO:0050682 "AF-2 domain binding"
evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0033327 "Leydig cell differentiation"
evidence=IEA] [GO:0030238 "male sex determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0019904 GO:GO:0003714 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0006950 GO:GO:0016020 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0008584 GO:GO:0000122
GO:GO:0043433 GO:GO:0033144 GO:GO:0060008 GO:GO:0030238
GO:GO:0045596 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 CTD:190 eggNOG:NOG238310
HOGENOM:HOG000231151 KO:K08562 OrthoDB:EOG48D0V9 EMBL:U82466
EMBL:AF035816 EMBL:AF019044 RefSeq:NP_999552.1 UniGene:Ssc.14500
ProteinModelPortal:P79386 STRING:P79386 GeneID:397680
KEGG:ssc:397680 Uniprot:P79386
Length = 471
Score = 132 (51.5 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 47 SPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRG 106
SP H+ + + A+V+ + G L + + + E+A LK VLF + G
Sbjct: 335 SPQPPVQPHLVLPSEAEHLPSVAEVQAIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPG 394
Query: 107 LKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTV 166
L+ ++ LQ Q +L++H+R H ARF L R I + + +FF +
Sbjct: 395 LQCVKYIQGLQWGTQQILSEHIRMTHRGYQARFAELNSALFLLRFINANVLAELFFRPII 454
Query: 167 ANTSMEKLLCDM 178
SM+ ++ +M
Sbjct: 455 GTVSMDDMMLEM 466
Score = 40 (19.1 bits), Expect = 6.4e-10, Sum P(2) = 6.4e-10
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 266 LRFVKYLPCFQVLPLDQQLV 285
>UNIPROTKB|F1SPV3 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9823 "Sus scrofa" [GO:0060008 "Sertoli cell
differentiation" evidence=IEA] [GO:0050682 "AF-2 domain binding"
evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042788 "polysomal ribosome" evidence=IEA]
[GO:0035258 "steroid hormone receptor binding" evidence=IEA]
[GO:0033327 "Leydig cell differentiation" evidence=IEA] [GO:0033144
"negative regulation of intracellular steroid hormone receptor
signaling pathway" evidence=IEA] [GO:0032448 "DNA hairpin binding"
evidence=IEA] [GO:0030325 "adrenal gland development" evidence=IEA]
[GO:0030238 "male sex determination" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0008104 GO:GO:0006950 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0043433
GO:GO:0033144 GO:GO:0060008 GO:GO:0030238 GO:GO:0045596
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 OMA:CCFCGED
GeneTree:ENSGT00390000015719 EMBL:CU481468
ProteinModelPortal:F1SPV3 Ensembl:ENSSSCT00000013344 Uniprot:F1SPV3
Length = 472
Score = 132 (51.5 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 34/132 (25%), Positives = 60/132 (45%)
Query: 47 SPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRG 106
SP H+ + + A+V+ + G L + + + E+A LK VLF + G
Sbjct: 336 SPQPPVQPHLVLPSEAEHLPSVAEVQAIKGFLAKCWSLDISTKEYAYLKGTVLFNPDLPG 395
Query: 107 LKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTV 166
L+ ++ LQ Q +L++H+R H ARF L R I + + +FF +
Sbjct: 396 LQCVKYIQGLQWGTQQILSEHIRMTHRGYQARFAELNSALFLLRFINANVLAELFFRPII 455
Query: 167 ANTSMEKLLCDM 178
SM+ ++ +M
Sbjct: 456 GTVSMDDMMLEM 467
Score = 40 (19.1 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 267 LRFVKYLPCFQVLPLDQQLV 286
>ZFIN|ZDB-GENE-030821-2 [details] [associations]
symbol:esrrga "estrogen-related receptor gamma a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030821-2 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 EMBL:CT027582 IPI:IPI00489991
ProteinModelPortal:F1QH45 Ensembl:ENSDART00000126966
ArrayExpress:F1QH45 Bgee:F1QH45 Uniprot:F1QH45
Length = 508
Score = 151 (58.2 bits), Expect = 6.7e-10, P = 6.7e-10
Identities = 44/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F+ L DQ+ + SL + L A +++ +
Sbjct: 330 IGWAKHIPGFSTLSLADQMSLLQSAWMEILILRVVYRSLSFEDK--LVYAEDYIM---DE 384
Query: 63 KASQTAADVRVLNGVLQ---RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
S+ A + + N +LQ +++ + ++ EF LKA+ L S++ ++D V+ LQD
Sbjct: 385 DQSKLAGLLDLNNAILQLVKKYKSMKLEKEEFVTLKAIALANSDSMHIEDVEAVQKLQDV 444
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G+LL+ R + VQH + K M KL ++
Sbjct: 445 LHEALQDYEAGQHVEDPRRAGKLLMTLPLLRQTSTKAVQHFYSIKQDGKVPMHKLFLEL 503
>UNIPROTKB|Q0GFF5 [details] [associations]
symbol:RXRbeta "Retinoid X receptor beta" species:9823 "Sus
scrofa" [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004886
"9-cis retinoic acid receptor activity" evidence=IEA] [GO:0001893
"maternal placenta development" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300
GO:GO:0045944 GO:GO:0044212 GO:GO:0060038 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 GO:GO:0055012 HOGENOM:HOG000260821
OrthoDB:EOG4SJ5DV GO:GO:0004886 KO:K08525 CTD:6257 EMBL:CT737383
RefSeq:NP_001177175.1 UniGene:Ssc.1598 GeneID:100156801
KEGG:ssc:100156801 EMBL:DQ866835 SMR:Q0GFF5 STRING:Q0GFF5
Ensembl:ENSSSCT00000001642 Uniprot:Q0GFF5
Length = 484
Score = 150 (57.9 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
V+WAK +P F++LP DQVI + S+ + + L HV
Sbjct: 350 VEWAKRIPHFSSLPLDDQVILLRAGWNELLIASFSHRSIDVRDGI-LLATGLHVHRNSAH 408
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
A A RVL ++ + R + +D E CL+A++LF + +GL + +VE L+++
Sbjct: 409 SAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYA 468
Query: 123 MLAQHVRTHHPAQPAR 138
L + + +P Q R
Sbjct: 469 SLETYCKQKYPEQQGR 484
>UNIPROTKB|E2QTG2 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0003677
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0043433 Ensembl:ENSCAFT00000019466
Uniprot:E2QTG2
Length = 260
Score = 143 (55.4 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 51/188 (27%), Positives = 81/188 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXX---------XXXXXXXXNAIQWSLPLLESSPLF--- 50
V + KNLPSF LP +DQ + + +P + L
Sbjct: 70 VVFLKNLPSFCQLPPQDQQLLLRVCWGPLFLLGLAQDTVTFEVAEAPVPSILKKILLEEP 129
Query: 51 NASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDS 110
++ H +P+ AA V+ L L+ F + + P E+A LK +LF GL S
Sbjct: 130 SSGAHSGQLPDRPQPSLAA-VQWLQCCLESFWSLELGPKEYAYLKETILFNPGLPGLHAS 188
Query: 111 LQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTS 170
+ +LQ++A L + + PA R R+LL S ++IP + + +FF V +
Sbjct: 189 SHIGHLQEEAHHALCEALEPWCPAGQGRLARVLLTASTLKSIPPSLLGDLFFRPIVGDID 248
Query: 171 MEKLLCDM 178
+ LL DM
Sbjct: 249 IAGLLEDM 256
>UNIPROTKB|E2R3L9 [details] [associations]
symbol:NR0B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060008 "Sertoli cell differentiation"
evidence=IEA] [GO:0050682 "AF-2 domain binding" evidence=IEA]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042788 "polysomal ribosome" evidence=IEA] [GO:0035258 "steroid
hormone receptor binding" evidence=IEA] [GO:0033327 "Leydig cell
differentiation" evidence=IEA] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=IEA] [GO:0032448 "DNA hairpin binding" evidence=IEA]
[GO:0030325 "adrenal gland development" evidence=IEA] [GO:0030238
"male sex determination" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0008104 GO:GO:0006950 GO:GO:0006694
GO:GO:0030325 GO:GO:0033327 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0043433
GO:GO:0033144 GO:GO:0060008 GO:GO:0030238 GO:GO:0045596
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 KO:K08562 OMA:CCFCGED
GeneTree:ENSGT00390000015719 EMBL:AAEX03026238
RefSeq:XP_003640302.1 Ensembl:ENSCAFT00000021662 GeneID:100855508
KEGG:cfa:100855508 Uniprot:E2R3L9
Length = 471
Score = 130 (50.8 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 35/122 (28%), Positives = 60/122 (49%)
Query: 59 VPNGKASQ--TAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENL 116
VP +A + TAA+V+ + L + + + E+A LK VLF + GL ++ L
Sbjct: 345 VPPREAGRLPTAAEVQAIKCFLAKCWSLDISTKEYAYLKGTVLFNPDLPGLHCVKYIQGL 404
Query: 117 QDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
Q AQ +L+ H+R H ARF L R + + + +FF + + SM+ ++
Sbjct: 405 QWGAQQILSDHIRMTHRGYQARFTELNSALFLLRYVNADVIVELFFRPIIGSVSMDDMML 464
Query: 177 DM 178
+M
Sbjct: 465 EM 466
Score = 40 (19.1 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 267 LRFVKYLPCFQVLPLDQQLV 286
>UNIPROTKB|F6V4A2 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0003677 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00390000015719 CTD:8431
KO:K08563 OMA:HRTCREA EMBL:AAEX03001717 Ensembl:ENSCAFT00000019466
RefSeq:XP_854945.1 GeneID:612125 KEGG:cfa:612125 Uniprot:F6V4A2
Length = 279
Score = 143 (55.4 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/188 (27%), Positives = 81/188 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXX---------XXXXXXXXNAIQWSLPLLESSPLF--- 50
V + KNLPSF LP +DQ + + +P + L
Sbjct: 70 VVFLKNLPSFCQLPPQDQQLLLRVCWGPLFLLGLAQDTVTFEVAEAPVPSILKKILLEEP 129
Query: 51 NASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDS 110
++ H +P+ AA V+ L L+ F + + P E+A LK +LF GL S
Sbjct: 130 SSGAHSGQLPDRPQPSLAA-VQWLQCCLESFWSLELGPKEYAYLKETILFNPGLPGLHAS 188
Query: 111 LQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTS 170
+ +LQ++A L + + PA R R+LL S ++IP + + +FF V +
Sbjct: 189 SHIGHLQEEAHHALCEALEPWCPAGQGRLARVLLTASTLKSIPPSLLGDLFFRPIVGDID 248
Query: 171 MEKLLCDM 178
+ LL DM
Sbjct: 249 IAGLLEDM 256
>UNIPROTKB|F1P0D1 [details] [associations]
symbol:F1P0D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
GeneTree:ENSGT00700000104390 OMA:KADVQRP EMBL:AADN02014532
EMBL:AADN02014533 IPI:IPI00577280 Ensembl:ENSGALT00000013874
ArrayExpress:F1P0D1 Uniprot:F1P0D1
Length = 600
Score = 146 (56.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 44/182 (24%), Positives = 83/182 (45%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVA-AV 59
+++ WA+++P+F AL Q + + S+ L H+ ++
Sbjct: 400 LSMHWARSIPAFQALGQECNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNHLQNSI 459
Query: 60 PNGKASQTAADVRVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGLKDSLQV 113
K S +V+ + LQ F + +D E+A LKA+VLF + GL S Q+
Sbjct: 460 QEDKLSGDRIK-QVMEHIWKLQEFCNSMAKIDIDGYEYAYLKAIVLFSPDHPGLNSSTQI 518
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E Q++AQ+ L +V+ +P R R+L+ R + S+ + +FF + N ++
Sbjct: 519 EKFQEKAQMELQDYVQKTYPEDTYRLARILVRLPALRLMSSSITEELFFTGLIGNVPIDS 578
Query: 174 LL 175
++
Sbjct: 579 II 580
>UNIPROTKB|Q9BG94 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9483 "Callithrix jacchus" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 EMBL:AF322895 ProteinModelPortal:Q9BG94
HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258 InterPro:IPR025900
Pfam:PF14046 Uniprot:Q9BG94
Length = 470
Score = 125 (49.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 33/134 (24%), Positives = 60/134 (44%)
Query: 45 ESSPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSET 104
E P+ H+A + +A+ V+ + L + + + E+A LK VLF +
Sbjct: 332 EPLPVPTLQPHLAPPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDV 391
Query: 105 RGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAK 164
GL+ ++ LQ Q +L++H+R H RF L R I + + +FF
Sbjct: 392 PGLQCVKYIQGLQWGTQQILSEHIRMTHRGHHDRFIELNSALFLLRFINANVIAELFFRP 451
Query: 165 TVANTSMEKLLCDM 178
+ SM+ ++ +M
Sbjct: 452 IIGTVSMDDMMLEM 465
Score = 40 (19.1 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 266 LRFVKYLPCFQVLPLDQQLV 285
>ZFIN|ZDB-GENE-040616-2 [details] [associations]
symbol:esrrb "estrogen-related receptor beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040616-2 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104391 EMBL:CABZ01058931 EMBL:CABZ01058932
EMBL:CABZ01058933 EMBL:CABZ01073498 EMBL:CABZ01073499
EMBL:CABZ01073500 EMBL:CABZ01113871 IPI:IPI00504271
ProteinModelPortal:F1R2J7 Ensembl:ENSDART00000007600 Bgee:F1R2J7
Uniprot:F1R2J7
Length = 484
Score = 143 (55.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 42/178 (23%), Positives = 79/178 (44%)
Query: 3 VKWAKNLPS-FAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
+ WAK++P+ F++L DQ+ + + SLP + L A ++V +
Sbjct: 304 IGWAKHIPAGFSSLSLGDQMSLLQSAWMEILILSIVFRSLPYEDE--LVYAEDYVMDEEH 361
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKS-ETRGLKDSLQVENLQDQA 120
+ + + ++++++ + V+ EF LKA+ L S ++ ++D V+ LQD
Sbjct: 362 SRLTGLLDLYLSILQLVRKYKKLKVEKEEFVTLKAIALANSTDSMHIEDVESVQKLQDAL 421
Query: 121 QVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + H P R G+LL+ R + +QH + K M KL +M
Sbjct: 422 HEALQDYESCQHAEDPRRAGKLLMTLPLLRQTATKAIQHFYSIKMQGKVPMHKLFLEM 479
>UNIPROTKB|F1NW94 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104390 EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00586813
Ensembl:ENSGALT00000018481 ArrayExpress:F1NW94 Uniprot:F1NW94
Length = 562
Score = 143 (55.4 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++PSF AL +D I N + ++L L + S + N + +AA
Sbjct: 362 LSMHWARSIPSFQALG-QDNSISLVKACW-----NEL-FTLGLAQCSQVMNVATILAAFV 414
Query: 61 NGKASQTAADVR-------VLNGV--LQRF--RLVGV--DPAEFACLKAVVLFKSETRGL 107
N D V+ + LQ F +V + D E+A LKA+VLF + GL
Sbjct: 415 NHLHDSLQQDKLPTDRGKLVMEHIFKLQEFCNSMVKLCLDGYEYAYLKAIVLFSPDHPGL 474
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
++ +Q+E Q++A + +V +P R RLLL R + +A + +FFA +
Sbjct: 475 ENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPALRLMSAAITEELFFAGLIG 534
Query: 168 NTSMEKLL 175
N ++ ++
Sbjct: 535 NVQIDSII 542
>UNIPROTKB|I3LCV8 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0008206 GO:GO:0005543 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042632 GO:GO:0042127 GO:GO:0044212
GO:GO:0045070 GeneTree:ENSGT00670000097927 EMBL:FP236742
Ensembl:ENSSSCT00000026077 OMA:DINEYSC Uniprot:I3LCV8
Length = 167
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 77 VLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQP 136
++ + R + D EF CLK +VLF + + L++ VE +Q+Q L + ++P Q
Sbjct: 60 LVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQVNAALLDYTMCNYPQQT 119
Query: 137 ARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
+FG+LLL + R I +++++ + LL +M
Sbjct: 120 EKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIEM 161
>UNIPROTKB|E1BZA2 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0016605 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 GO:GO:0048386
GeneTree:ENSGT00700000104390 OMA:QNSNEMS EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00681663
Ensembl:ENSGALT00000030638 ArrayExpress:E1BZA2 Uniprot:E1BZA2
Length = 639
Score = 143 (55.4 bits), Expect = 6.9e-09, P = 6.9e-09
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++PSF AL +D I N + ++L L + S + N + +AA
Sbjct: 439 LSMHWARSIPSFQALG-QDNSISLVKACW-----NEL-FTLGLAQCSQVMNVATILAAFV 491
Query: 61 NGKASQTAADVR-------VLNGV--LQRF--RLVGV--DPAEFACLKAVVLFKSETRGL 107
N D V+ + LQ F +V + D E+A LKA+VLF + GL
Sbjct: 492 NHLHDSLQQDKLPTDRGKLVMEHIFKLQEFCNSMVKLCLDGYEYAYLKAIVLFSPDHPGL 551
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
++ +Q+E Q++A + +V +P R RLLL R + +A + +FFA +
Sbjct: 552 ENVVQIEKFQEKAYMEFQDYVTKAYPDDTYRLSRLLLRLPALRLMSAAITEELFFAGLIG 611
Query: 168 NTSMEKLL 175
N ++ ++
Sbjct: 612 NVQIDSII 619
>ZFIN|ZDB-GENE-030131-4652 [details] [associations]
symbol:nr5a5 "nuclear receptor subfamily 5, group
A, member 5" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;NAS;IDA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-4652 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HSSP:P03372 InterPro:IPR016355 PIRSF:PIRSF002530 HOVERGEN:HBG106677
EMBL:AF327373 IPI:IPI00508517 RefSeq:NP_999944.1 UniGene:Dr.11921
ProteinModelPortal:Q98ST8 SMR:Q98ST8 GeneID:407626 KEGG:dre:407626
CTD:407626 InParanoid:Q98ST8 NextBio:20818501 ArrayExpress:Q98ST8
Uniprot:Q98ST8
Length = 537
Score = 141 (54.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 43/179 (24%), Positives = 78/179 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAI--QWSLPLLESSPLFNASEHVAAVP 60
V+WA+N F L DQ++ + + Q + S L + A+
Sbjct: 353 VEWARNCELFKELKVDDQMVLLQSCWSELLVLDHLCRQVAYGRDGSICLITGQQIEASTI 412
Query: 61 NGKASQTAAD-VRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
+A T + V ++ + R + +D EF CLK +VLF + + +++ QVE Q++
Sbjct: 413 LSQAGVTLSSLVSRAQDLVTKLRSLQLDREEFVCLKYLVLFNPDVKSVQNRRQVEQTQER 472
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L H HP +FG+LLL + R+I ++++ + + LL +M
Sbjct: 473 VNKALMDHTMQTHPGHSDKFGQLLLRLPEVRSISLQVEEYLYQRHLLGDFPCNSLLTEM 531
>UNIPROTKB|Q28CK1 [details] [associations]
symbol:nr2c1 "Nuclear receptor subfamily 2 group C member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0030522 eggNOG:NOG297520 HOVERGEN:HBG008596 KO:K08543
CTD:7181 HOGENOM:HOG000013058 OrthoDB:EOG476JZT EMBL:CR926338
EMBL:BC123034 RefSeq:NP_001016207.1 UniGene:Str.15706 HSSP:P33242
ProteinModelPortal:Q28CK1 SMR:Q28CK1 STRING:Q28CK1 GeneID:548961
KEGG:xtr:548961 Xenbase:XB-GENE-484727 Bgee:Q28CK1 Uniprot:Q28CK1
Length = 636
Score = 142 (55.0 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 50/188 (26%), Positives = 92/188 (48%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++PSF +L + + N + +SL L + + N +AA
Sbjct: 436 LSMHWARSIPSFQSLGQENSI------SLVKACWNEL-FSLGLAQCCQVMNVETILAAFV 488
Query: 61 NG-----KASQTAAD-VR-VLNGV--LQRF--RLV--GVDPAEFACLKAVVLFKSETRGL 107
N + + +AD V+ V++ + LQ F +V VD E+A LKA+ LF + GL
Sbjct: 489 NHLHNSMQHDKLSADKVKLVMDHIFKLQEFCNSMVKLSVDGYEYAYLKAIALFSPDHPGL 548
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
++ +E LQ++A + +V +P R RLLL R + +A + +FFA +
Sbjct: 549 ENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALRLLNAAITEELFFAGLIG 608
Query: 168 NTSMEKLL 175
N ++ ++
Sbjct: 609 NVQIDSII 616
>ZFIN|ZDB-GENE-990415-68 [details] [associations]
symbol:esrra "estrogen-related receptor alpha"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0042074 "cell
migration involved in gastrulation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-68
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0042074 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OMA:PLPFPGS GeneTree:ENSGT00700000104391 HSSP:P20393 EMBL:BX465841
EMBL:AY556395 IPI:IPI00482428 RefSeq:NP_998120.1 UniGene:Dr.30382
SMR:Q6Q6F6 Ensembl:ENSDART00000100658 GeneID:405891 KEGG:dre:405891
InParanoid:Q6Q6F6 NextBio:20817852 Uniprot:Q6Q6F6
Length = 436
Score = 139 (54.0 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/177 (26%), Positives = 74/177 (41%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F +L DQ+ SL E +F A + V
Sbjct: 255 IGWAKHIPGFLSLSLADQMSVLQSVWLEVLVLGVAYRSLGC-EDEVVF-AEDFVLDEEMS 312
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA-Q 121
+ + ++ + +RFR + +D EF LKA+ L S++ ++D V+ L+D Q
Sbjct: 313 RVAGLTELNAAISQLARRFRALQLDREEFVMLKAIALTNSDSVYIEDMEAVQKLRDLLHQ 372
Query: 122 VMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
+L V+ P P R GRLLL R + + KT M KL +M
Sbjct: 373 ALLELEVQ-RRPDDPQRAGRLLLTLPLLRQTAGRALTTFYSIKTRGGVPMHKLFLEM 428
>RGD|68353 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member 2"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO;ISS] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005543
"phospholipid binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0008206 "bile acid metabolic process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA;ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:68353 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0003690 GO:GO:0045070 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:AB012960 EMBL:AB012961
IPI:IPI00212414 IPI:IPI00212417 RefSeq:NP_068510.1 UniGene:Rn.42941
ProteinModelPortal:Q9QWM1 SMR:Q9QWM1 STRING:Q9QWM1
PhosphoSite:Q9QWM1 Ensembl:ENSRNOT00000000811
Ensembl:ENSRNOT00000000812 GeneID:60349 KEGG:rno:60349
UCSC:RGD:68353 InParanoid:Q9QWM1 NextBio:612007
Genevestigator:Q9QWM1 GermOnline:ENSRNOG00000000653 Uniprot:Q9QWM1
Length = 560
Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
R R + D EF CLK +VLF S+ + L++ VE +Q+Q L + ++P Q +F
Sbjct: 456 RLRSLQFDQREFVCLKFLVLFSSDVKNLENFQLVEGVQEQVNAALLDYTLCNYPQQTEKF 515
Query: 140 GRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
G+LLL + R I ++++ + LL +M
Sbjct: 516 GQLLLRLPEIRAISKQAEDYLYYKHVNGDVPYNNLLIEM 554
>ZFIN|ZDB-GENE-990415-79 [details] [associations]
symbol:nr5a2 "nuclear receptor subfamily 5, group A,
member 2" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS;IDA] [GO:0051216 "cartilage development"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-79 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0051216
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
HOGENOM:HOG000063718 HOVERGEN:HBG106677 HSSP:P45448 EMBL:AL954148
EMBL:BC163522 EMBL:AY034061 IPI:IPI00511047 UniGene:Dr.6870
SMR:Q90YL6 STRING:Q90YL6 Ensembl:ENSDART00000127424
InParanoid:Q90YL6 Uniprot:Q90YL6
Length = 517
Score = 139 (54.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 34/119 (28%), Positives = 61/119 (51%)
Query: 64 ASQTAADVRVL----NGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
ASQ A + L ++ + R + +D EF CLK +VLF + + L++ VE++Q+Q
Sbjct: 393 ASQAGATLNNLLSHAQELVSKLRSLQLDQREFVCLKFLVLFSLDVKNLENFHLVESVQEQ 452
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L +V ++P Q +FG+LLL + R I +++++ + LL +M
Sbjct: 453 VNAALLDYVMCNYPQQTDKFGQLLLRLPEIRAISLQAEEYLYYKHLNGDVPCNNLLIEM 511
>FB|FBgn0003651 [details] [associations]
symbol:svp "seven up" species:7227 "Drosophila melanogaster"
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0007503 "fat body development" evidence=TAS] [GO:0061331
"epithelial cell proliferation involved in Malpighian tubule
morphogenesis" evidence=IMP] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048749
"compound eye development" evidence=NAS] [GO:0004872 "receptor
activity" evidence=NAS;TAS] [GO:0001752 "compound eye photoreceptor
fate commitment" evidence=TAS] [GO:0007465 "R7 cell fate
commitment" evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=TAS] [GO:0007462 "R1/R6 cell fate commitment"
evidence=TAS] [GO:0007510 "cardioblast cell fate determination"
evidence=IGI;IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007507
"heart development" evidence=NAS;TAS] [GO:0001700 "embryonic
development via the syncytial blastoderm" evidence=NAS] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007419
"ventral cord development" evidence=TAS] [GO:0042331 "phototaxis"
evidence=IMP] [GO:0007270 "neuron-neuron synaptic transmission"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0046530
"photoreceptor cell differentiation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0007601 UniGene:Dm.20676 GeneID:41491
KEGG:dme:Dmel_CG11502 CTD:41491 FlyBase:FBgn0003651
GeneTree:ENSGT00670000097509 KO:K14032 GenomeRNAi:41491
NextBio:824138 GermOnline:CG11502 GO:GO:0004879 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 GO:GO:0007510
GO:GO:0061331 GO:GO:0007503 GO:GO:0007270 GO:GO:0042331
GO:GO:0007462 GO:GO:0007464 GO:GO:0007465 GO:GO:0007419
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:M28864
PIR:B32693 RefSeq:NP_731681.1 ProteinModelPortal:P16376 SMR:P16376
STRING:P16376 EnsemblMetazoa:FBtr0082563 InParanoid:P16376
PhylomeDB:P16376 Bgee:P16376 Uniprot:P16376
Length = 746
Score = 141 (54.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 33/99 (33%), Positives = 50/99 (50%)
Query: 2 AVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPN 61
AV+WAKN+P F L DQV NA Q S+PL + L A H + +
Sbjct: 352 AVEWAKNIPFFPELQVTDQVALLRLVWSELFVLNASQCSMPLHVAPLLAAAGLHASPMAA 411
Query: 62 GKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLF 100
+ +R+ +++ + + VD AE++CLKA+VLF
Sbjct: 412 DRVVAFMDHIRIFQEQVEKLKALHVDSAEYSCLKAIVLF 450
>MGI|MGI:1346834 [details] [associations]
symbol:Nr5a2 "nuclear receptor subfamily 5, group A, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005543
"phospholipid binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0008206 "bile acid metabolic process" evidence=IMP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042632 "cholesterol homeostasis"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045070 "positive regulation of viral
genome replication" evidence=ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Reactome:REACT_13641 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1346834 GO:GO:0005829 GO:GO:0005634
GO:GO:0008206 GO:GO:0005543 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0042632 GO:GO:0042127 GO:GO:0044212
Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018 GO:GO:0045070
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 InterPro:IPR016355
PIRSF:PIRSF002530 PDB:3F5C PDBsum:3F5C PDB:1ZH7 PDBsum:1ZH7
CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677 KO:K08027
OrthoDB:EOG470TH1 OMA:NTFGLMC EMBL:M81385 EMBL:BC137845
IPI:IPI00129665 PIR:S27874 RefSeq:NP_109601.1 UniGene:Mm.16794
PDB:1PK5 PDBsum:1PK5 ProteinModelPortal:P45448 SMR:P45448
STRING:P45448 PhosphoSite:P45448 PRIDE:P45448
Ensembl:ENSMUST00000027649 GeneID:26424 KEGG:mmu:26424
UCSC:uc007cvc.2 InParanoid:P45448 EvolutionaryTrace:P45448
NextBio:304453 Bgee:P45448 CleanEx:MM_NR5A2 Genevestigator:P45448
GermOnline:ENSMUSG00000026398 Uniprot:P45448
Length = 560
Score = 139 (54.0 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
R R + D EF CLK +VLF S+ + L++ VE +Q+Q L + ++P Q +F
Sbjct: 456 RLRSLQFDQREFVCLKFLVLFSSDVKNLENLQLVEGVQEQVNAALLDYTVCNYPQQTEKF 515
Query: 140 GRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
G+LLL + R I ++++ + LL +M
Sbjct: 516 GQLLLRLPEIRAISKQAEDYLYYKHVNGDVPYNNLLIEM 554
>FB|FBgn0261239 [details] [associations]
symbol:Hr39 "Hormone receptor-like in 39" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=ISS;NAS;IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS;IDA] [GO:0000978 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;NAS]
[GO:0003712 "transcription cofactor activity" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0016321 "female meiosis
chromosome segregation" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0035072 "ecdysone-mediated induction of salivary gland cell
autophagic cell death" evidence=IMP] [GO:0035211 "spermathecum
morphogenesis" evidence=IMP] [GO:0060968 "regulation of gene
silencing" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 EMBL:AE014134 GO:GO:0046872 GO:GO:0004879
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0000978 GO:GO:0006919 GO:GO:0016321
GO:GO:0035072 GO:GO:0060968 EMBL:L06423 EMBL:L07551 EMBL:L07549
EMBL:L07550 EMBL:AY069676 PIR:S33708 PIR:S33709 RefSeq:NP_476932.1
RefSeq:NP_476933.1 RefSeq:NP_599123.1 RefSeq:NP_724322.1
UniGene:Dm.4837 ProteinModelPortal:Q05192 SMR:Q05192 IntAct:Q05192
MINT:MINT-807520 STRING:Q05192 EnsemblMetazoa:FBtr0081479
EnsemblMetazoa:FBtr0081480 EnsemblMetazoa:FBtr0081481 GeneID:35398
KEGG:dme:Dmel_CG8676 CTD:35398 FlyBase:FBgn0261239 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 InParanoid:Q05192 KO:K08705
OMA:YTLAHYP OrthoDB:EOG4P8D09 PhylomeDB:Q05192 GenomeRNAi:35398
NextBio:793317 Bgee:Q05192 GermOnline:CG8676 GO:GO:0035211
Uniprot:Q05192
Length = 808
Score = 141 (54.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 37/142 (26%), Positives = 65/142 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
VKW K+LP F + DQ+ + S+ + + +
Sbjct: 632 VKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLSQAKS 691
Query: 63 KASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQV 122
QT + R+LN + R + VD E+ +K +VL +S+T L+++++V Q++A
Sbjct: 692 NGLQTCIE-RMLN-LTDHLRRLRVDRYEYVAMKVIVLLQSDTTELQEAVKVRECQEKALQ 749
Query: 123 MLAQHVRTHHPAQPARFGRLLL 144
L + H+P P++FG LLL
Sbjct: 750 SLQAYTLAHYPDTPSKFGELLL 771
>MGI|MGI:1352462 [details] [associations]
symbol:Nr1h3 "nuclear receptor subfamily 1, group H, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006633 "fatty acid
biosynthetic process" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010867 "positive regulation of triglyceride
biosynthetic process" evidence=ISO] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=ISO]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=ISO;IDA] [GO:0010887 "negative regulation of cholesterol
storage" evidence=ISO;IGI] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IDA] [GO:0032270 "positive
regulation of cellular protein metabolic process" evidence=ISO]
[GO:0032369 "negative regulation of lipid transport" evidence=ISO]
[GO:0032376 "positive regulation of cholesterol transport"
evidence=ISO] [GO:0032570 "response to progesterone stimulus"
evidence=ISO] [GO:0032810 "sterol response element binding"
evidence=ISO] [GO:0034145 "positive regulation of toll-like
receptor 4 signaling pathway" evidence=ISO] [GO:0042632
"cholesterol homeostasis" evidence=IGI] [GO:0043031 "negative
regulation of macrophage activation" evidence=IDA] [GO:0043277
"apoptotic cell clearance" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IDA]
[GO:0044255 "cellular lipid metabolic process" evidence=IDA]
[GO:0045723 "positive regulation of fatty acid biosynthetic
process" evidence=ISO] [GO:0045861 "negative regulation of
proteolysis" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048550 "negative regulation of pinocytosis"
evidence=ISO] [GO:0050728 "negative regulation of inflammatory
response" evidence=IDA] [GO:0051006 "positive regulation of
lipoprotein lipase activity" evidence=ISO] [GO:0055088 "lipid
homeostasis" evidence=IGI;IMP] [GO:0055092 "sterol homeostasis"
evidence=IMP] [GO:0070328 "triglyceride homeostasis"
evidence=IGI;IMP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO;IDA] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=IMP] [GO:0090341
"negative regulation of secretion of lysosomal enzymes"
evidence=IMP] [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:1352462 GO:GO:0005634 GO:GO:0005737 GO:GO:0008286
GO:GO:0046872 GO:GO:0003677 GO:GO:0050728 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0045861
GO:GO:0006633 GO:GO:0071222 GO:GO:0042632 GO:GO:0010887
GO:GO:0010875 GO:GO:0000122 GO:GO:0051006 GO:GO:0000790
GO:GO:2000189 GO:GO:0070328 GO:GO:0010867 GO:GO:0032570
GO:GO:0032270 GO:GO:0045723 GO:GO:0043031 GO:GO:0043277
eggNOG:NOG285805 GeneTree:ENSGT00680000099585 GO:GO:0010870
GO:GO:0032369 GO:GO:0034145 EMBL:AL691450 GO:GO:0048550
HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 CTD:10062 KO:K08536 OMA:CILREEA
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:AJ132599
EMBL:AJ132600 EMBL:AJ132601 EMBL:AF085745 IPI:IPI00129650
RefSeq:NP_001171201.1 RefSeq:NP_038867.2 UniGene:Mm.22690 PDB:2ACL
PDB:3FAL PDB:3FC6 PDBsum:2ACL PDBsum:3FAL PDBsum:3FC6
ProteinModelPortal:Q9Z0Y9 SMR:Q9Z0Y9 IntAct:Q9Z0Y9 STRING:Q9Z0Y9
PhosphoSite:Q9Z0Y9 PRIDE:Q9Z0Y9 Ensembl:ENSMUST00000002177
Ensembl:ENSMUST00000111354 Ensembl:ENSMUST00000111356 GeneID:22259
KEGG:mmu:22259 InParanoid:Q9Z0Y9 EvolutionaryTrace:Q9Z0Y9
NextBio:302349 Bgee:Q9Z0Y9 CleanEx:MM_NR1H3 Genevestigator:Q9Z0Y9
GermOnline:ENSMUSG00000002108 Uniprot:Q9Z0Y9
Length = 445
Score = 137 (53.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 49/186 (26%), Positives = 86/186 (46%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN-ASEHVAAVPN 61
V +AK LP F L DQ+ +AI+ + LLE+S +N SE + + +
Sbjct: 267 VDFAKQLPGFLQLSREDQI--------ALLKTSAIE--VMLLETSRRYNPGSESITFLKD 316
Query: 62 GKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFACLKAVVLFKSETRGLKDSLQV 113
++ V +N + + R + ++ AEFA L A+ +F ++ ++D LQV
Sbjct: 317 FSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQV 376
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ L +V +HP P F R+L+ R + S + +F A + + +
Sbjct: 377 ERLQHTYVEALHAYVSINHPHDPLMFPRMLMKLVSLRTLSSVHSEQVF-ALRLQDKKLPP 435
Query: 174 LLCDMY 179
LL +++
Sbjct: 436 LLSEIW 441
>UNIPROTKB|Q6GN21 [details] [associations]
symbol:nr2c1-a "Nuclear receptor subfamily 2 group C member
1-A" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 EMBL:BC073700 EMBL:AF013295
RefSeq:NP_001084198.1 UniGene:Xl.21534 ProteinModelPortal:Q6GN21
SMR:Q6GN21 GeneID:399361 KEGG:xla:399361 CTD:399361
Xenbase:XB-GENE-6254030 HOVERGEN:HBG008596 KO:K08543 Uniprot:Q6GN21
Length = 637
Score = 139 (54.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 49/188 (26%), Positives = 88/188 (46%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++PSF +L + + N + +SL L + S + N +AA
Sbjct: 437 LSMHWARSIPSFQSLGQENSI------SLVKACWNEL-FSLGLAQCSQVMNVETILAAFV 489
Query: 61 NGKASQTAAD------VRVLNG---VLQRF--RLVG--VDPAEFACLKAVVLFKSETRGL 107
N + D V+++ LQ F +V VD E+A LKA+ LF + GL
Sbjct: 490 NHLQNSMQHDKLSSDKVKLVTDHIFKLQEFCNSMVKLCVDGYEYAYLKAIALFSPDHPGL 549
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
++ +E LQ++A + +V +P R RLLL R + +A + +FFA +
Sbjct: 550 ENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALRLMNAAITEELFFAGLIG 609
Query: 168 NTSMEKLL 175
N ++ ++
Sbjct: 610 NVQIDSII 617
>UNIPROTKB|Q6QMY5 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:AY533243 RefSeq:NP_001002936.1 UniGene:Cfa.3916
HSSP:P11474 ProteinModelPortal:Q6QMY5 SMR:Q6QMY5 STRING:Q6QMY5
GeneID:403169 KEGG:cfa:403169 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 InParanoid:Q6QMY5 KO:K08552
OrthoDB:EOG48KRBN NextBio:20816913 Uniprot:Q6QMY5
Length = 422
Score = 136 (52.9 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/182 (25%), Positives = 79/182 (43%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ + WAK++P F++L DQ+ Q SLPL + L A + V
Sbjct: 237 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDE--LAFAEDLVLDEE 294
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+A+ VL +++R + + ++ E+ LKA+ L S++ ++D+ VE L++
Sbjct: 295 GARAAGLGELGAVLLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREAL 354
Query: 121 -QVMLAQHVRTHHP---AQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+ +L P A+ R GRLLL R + H + K M KL
Sbjct: 355 HEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFL 414
Query: 177 DM 178
+M
Sbjct: 415 EM 416
>UNIPROTKB|E1B9Y6 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007283 GO:GO:0021549 GO:GO:0030522 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182
KO:K08544 OMA:KADVQRP EMBL:DAAA02054598 IPI:IPI00714058
RefSeq:NP_001178990.1 UniGene:Bt.57739 PRIDE:E1B9Y6
Ensembl:ENSBTAT00000018228 GeneID:505531 KEGG:bta:505531
NextBio:20867182 Uniprot:E1B9Y6
Length = 611
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 48/189 (25%), Positives = 92/189 (48%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++P+F AL +D N + ++L L + + + + S +AA+
Sbjct: 411 LSMHWARSIPAFQALG-QD-----CNTSLVRACWNEL-FTLGLAQCAQVMSLSTILAAIV 463
Query: 61 NGKASQTAADV-------RVLNGV--LQRF-----RLVGVDPAEFACLKAVVLFKSETRG 106
N + D +V+ + LQ F RL +D E+A LKA+VLF + G
Sbjct: 464 NHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMARL-DIDGYEYAYLKAIVLFSPDHPG 522
Query: 107 LKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTV 166
L + Q+E Q++AQ+ L +V+ + R R+L+ R + S+ + +FF +
Sbjct: 523 LTSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSSITEELFFTGLI 582
Query: 167 ANTSMEKLL 175
N S++ ++
Sbjct: 583 GNVSIDSII 591
>UNIPROTKB|P51843 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0030238 "male sex
determination" evidence=IEA] [GO:0033327 "Leydig cell
differentiation" evidence=IEA] [GO:0045596 "negative regulation of
cell differentiation" evidence=IEA] [GO:0060008 "Sertoli cell
differentiation" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0021854 "hypothalamus development" evidence=NAS]
[GO:0021983 "pituitary gland development" evidence=NAS] [GO:0019904
"protein domain specific binding" evidence=IPI] [GO:0008584 "male
gonad development" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0050682
"AF-2 domain binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=IDA] [GO:0035258 "steroid hormone receptor binding"
evidence=IPI] [GO:0042803 "protein homodimerization activity"
evidence=IPI] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA;NAS] [GO:0003723 "RNA binding" evidence=IDA]
[GO:0042788 "polysomal ribosome" evidence=IDA] [GO:0032448 "DNA
hairpin binding" evidence=IDA] [GO:0006694 "steroid biosynthetic
process" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0008406 "gonad development" evidence=IMP]
[GO:0030325 "adrenal gland development" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IMP] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0030522
"intracellular receptor mediated signaling pathway"
evidence=NAS;IDA] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0005654 GO:GO:0008104 GO:GO:0006950
GO:GO:0016020 GO:GO:0006694 GO:GO:0030325 GO:GO:0033327
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0043434 GO:GO:0007283 GO:GO:0003723
GO:GO:0042788 GO:GO:0008584 GO:GO:0000122 GO:GO:0003690
GO:GO:0043433 DrugBank:DB00755 GO:GO:0021983
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367 DrugBank:DB01234
GO:GO:0021854 GO:GO:0033144 GO:GO:0060008 Orphanet:242
GO:GO:0030238 GO:GO:0045596 Orphanet:251510 HOVERGEN:HBG005453
GO:GO:0032448 InterPro:IPR025900 Pfam:PF14046 EMBL:S74720
EMBL:U31929 EMBL:BC011564 IPI:IPI00020943 IPI:IPI00646717
PIR:S50854 RefSeq:NP_000466.2 UniGene:Hs.268490
ProteinModelPortal:P51843 SMR:P51843 IntAct:P51843
MINT:MINT-2855705 STRING:P51843 PhosphoSite:P51843 DMDM:20532385
PaxDb:P51843 PRIDE:P51843 DNASU:190 Ensembl:ENST00000378970
Ensembl:ENST00000453287 GeneID:190 KEGG:hsa:190 UCSC:uc004dcf.4
CTD:190 GeneCards:GC0XM030322 HGNC:HGNC:7960 MIM:300018 MIM:300200
MIM:300473 neXtProt:NX_P51843 Orphanet:95702 PharmGKB:PA31746
eggNOG:NOG238310 HOGENOM:HOG000231151 InParanoid:P51843 KO:K08562
OMA:CCFCGED OrthoDB:EOG48D0V9 PhylomeDB:P51843 ChEMBL:CHEMBL1795094
GenomeRNAi:190 NextBio:776 ArrayExpress:P51843 Bgee:P51843
CleanEx:HS_NR0B1 Genevestigator:P51843 GermOnline:ENSG00000169297
Uniprot:P51843
Length = 470
Score = 123 (48.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 33/134 (24%), Positives = 59/134 (44%)
Query: 45 ESSPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSET 104
E P+ H+A + +A+ V+ + L + + + E+A LK VLF +
Sbjct: 332 EPLPVPTLQHHLAPPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDV 391
Query: 105 RGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAK 164
GL+ ++ LQ Q +L++H R H RF L R I + + +FF
Sbjct: 392 PGLQCVKYIQGLQWGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFRP 451
Query: 165 TVANTSMEKLLCDM 178
+ SM+ ++ +M
Sbjct: 452 IIGTVSMDDMMLEM 465
Score = 40 (19.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 266 LRFVKYLPCFQVLPLDQQLV 285
>UNIPROTKB|Q9BG93 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9544 "Macaca mulatta" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 eggNOG:NOG238310
HOGENOM:HOG000231151 OrthoDB:EOG48D0V9 EMBL:AF322896
UniGene:Mmu.3542 ProteinModelPortal:Q9BG93 STRING:Q9BG93
InParanoid:Q9BG93 Uniprot:Q9BG93
Length = 470
Score = 123 (48.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 33/134 (24%), Positives = 59/134 (44%)
Query: 45 ESSPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSET 104
E P+ H+A + +A+ V+ + L + + + E+A LK VLF +
Sbjct: 332 EPLPVPTLQHHLAPPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDV 391
Query: 105 RGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAK 164
GL+ ++ LQ Q +L++H R H RF L R I + + +FF
Sbjct: 392 PGLQCVKYIQGLQWGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFRP 451
Query: 165 TVANTSMEKLLCDM 178
+ SM+ ++ +M
Sbjct: 452 IIGTVSMDDMMLEM 465
Score = 40 (19.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 266 LRFVKYLPCFQVLPLDQQLV 285
>UNIPROTKB|E2QX37 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181
OMA:QNSNEMS EMBL:AAEX03009951 RefSeq:XP_854792.1
ProteinModelPortal:E2QX37 Ensembl:ENSCAFT00000010109 GeneID:611980
KEGG:cfa:611980 NextBio:20897515 Uniprot:E2QX37
Length = 605
Score = 123 (48.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E+A LKA+VLF + GL++ Q+E Q++A V ++ +P R RLLL
Sbjct: 496 IDGYEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLR 555
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
R + + + +FF + N ++ ++ + K
Sbjct: 556 LPALRLMNATITEELFFKGLIGNVRIDSVIPHILK 590
Score = 43 (20.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 1 MAVKWAKNLPSFAAL 15
+++ WA ++PSF AL
Sbjct: 405 LSMHWALSIPSFQAL 419
>UNIPROTKB|F1SQP7 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0048386
GeneTree:ENSGT00700000104390 KO:K08543 OMA:QNSNEMS EMBL:FP236518
RefSeq:XP_003126756.1 Ensembl:ENSSSCT00000000986 GeneID:100516014
KEGG:ssc:100516014 Uniprot:F1SQP7
Length = 605
Score = 123 (48.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E+A LKA+VLF + GL++ Q+E Q++A V ++ +P R RLLL
Sbjct: 496 IDGYEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLR 555
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
R + + + +FF + N ++ ++ + K
Sbjct: 556 LPALRLMNATITEELFFKGLIGNVRIDSVIPHILK 590
Score = 43 (20.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 1 MAVKWAKNLPSFAAL 15
+++ WA ++PSF AL
Sbjct: 405 LSMHWALSIPSFQAL 419
>UNIPROTKB|E1BML7 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043433 "negative regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043433 GeneTree:ENSGT00390000015719 CTD:8431 KO:K08563
OMA:HRTCREA EMBL:DAAA02006367 IPI:IPI00694275 RefSeq:XP_002685805.1
RefSeq:XP_592675.1 ProteinModelPortal:E1BML7
Ensembl:ENSBTAT00000019772 GeneID:514770 KEGG:bta:514770
NextBio:20871503 Uniprot:E1BML7
Length = 260
Score = 131 (51.2 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 46/183 (25%), Positives = 78/183 (42%)
Query: 7 KNLPSFAALPFRDQ---------VIXXXXXXXXXXXXNAIQWSLP-LLESSPLFNASEHV 56
+NLPSF LP D+ + + +P +L+ L S
Sbjct: 74 RNLPSFCQLPHHDRRQLLRGCWGPLFLLGLAQDTVTFQVAEVPMPSILKKILLEKPSNGA 133
Query: 57 AAVPNGKASQTA-ADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVEN 115
+ Q + A+V+ L L+ F + + P E+A LK +LF + GL S + +
Sbjct: 134 GSSQRPDRPQPSLAEVQWLQCCLESFWSLELGPKEYAYLKGTILFNPDVPGLYASSHIGH 193
Query: 116 LQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLL 175
LQ +A L + + PA +R R+LL S ++IP + + +F + + + LL
Sbjct: 194 LQQEAHQALWEVLEPWCPAGQSRLARVLLTASTLKSIPPSLLGDLFLRPVIGDVDIADLL 253
Query: 176 CDM 178
DM
Sbjct: 254 EDM 256
>UNIPROTKB|Q5E9B6 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9913
"Bos taurus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0044255 "cellular
lipid metabolic process" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0090341 "negative regulation of
secretion of lysosomal enzymes" evidence=IEA] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048550 "negative regulation of pinocytosis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045861
"negative regulation of proteolysis" evidence=IEA] [GO:0045723
"positive regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0043277 "apoptotic cell clearance" evidence=IEA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0034145 "positive regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0032810 "sterol response element
binding" evidence=IEA] [GO:0032570 "response to progesterone
stimulus" evidence=IEA] [GO:0032369 "negative regulation of lipid
transport" evidence=IEA] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=IEA] [GO:0010887
"negative regulation of cholesterol storage" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0010867 "positive
regulation of triglyceride biosynthetic process" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0050728 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045861 GO:GO:0044255
GO:GO:0042632 GO:GO:0000122 GO:GO:0051006 GO:GO:0000790
GO:GO:2000189 GO:GO:0070328 GO:GO:0010867 GO:GO:0032570
GO:GO:0032270 GO:GO:0045723 GO:GO:0046965 GO:GO:0043031
GO:GO:0043277 eggNOG:NOG285805 GeneTree:ENSGT00680000099585
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845
EMBL:BT021004 EMBL:BC103207 IPI:IPI00716440 RefSeq:NP_001014861.1
UniGene:Bt.88106 ProteinModelPortal:Q5E9B6 SMR:Q5E9B6 STRING:Q5E9B6
PRIDE:Q5E9B6 Ensembl:ENSBTAT00000014131 GeneID:507176
KEGG:bta:507176 CTD:10062 InParanoid:Q5E9B6 KO:K08536 OMA:CILREEA
NextBio:20867938 GO:GO:0032810 GO:GO:0090188 GO:GO:0090341
Uniprot:Q5E9B6
Length = 447
Score = 135 (52.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN-ASEHVAAVPN 61
V +AK LP F L DQ+ +AI+ + LLE+S +N SE + + +
Sbjct: 269 VDFAKQLPGFLQLSREDQI--------ALLKTSAIE--VMLLETSRRYNPGSESITFLKD 318
Query: 62 GKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFACLKAVVLFKSETRGLKDSLQV 113
++ V +N + + R + ++ AEFA L A+ +F ++ ++D LQV
Sbjct: 319 FSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQV 378
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ L +V HHP F R+L+ R + S + +F A + + +
Sbjct: 379 ERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF-ALRLQDKKLPP 437
Query: 174 LLCDMY 179
LL +++
Sbjct: 438 LLSEIW 443
>UNIPROTKB|Q13133 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0044255 "cellular lipid metabolic process" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0032810 "sterol response element binding"
evidence=IDA] [GO:0043277 "apoptotic cell clearance" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0032270 "positive regulation of cellular protein
metabolic process" evidence=IMP] [GO:0010875 "positive regulation
of cholesterol efflux" evidence=IDA;IMP] [GO:0045723 "positive
regulation of fatty acid biosynthetic process" evidence=IMP]
[GO:0051006 "positive regulation of lipoprotein lipase activity"
evidence=IMP] [GO:0010745 "negative regulation of macrophage
derived foam cell differentiation" evidence=IC] [GO:0032369
"negative regulation of lipid transport" evidence=IMP] [GO:0048550
"negative regulation of pinocytosis" evidence=IMP] [GO:0032376
"positive regulation of cholesterol transport" evidence=IDA]
[GO:0032570 "response to progesterone stimulus" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0050728
"negative regulation of inflammatory response" evidence=ISS]
[GO:0042632 "cholesterol homeostasis" evidence=ISS] [GO:0055092
"sterol homeostasis" evidence=ISS] [GO:0090341 "negative regulation
of secretion of lysosomal enzymes" evidence=ISS] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IDA] [GO:0034145 "positive regulation of toll-like
receptor 4 signaling pathway" evidence=IDA] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IDA] [GO:0042752
"regulation of circadian rhythm" evidence=TAS] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0060336 "negative regulation of
interferon-gamma-mediated signaling pathway" evidence=NAS]
[GO:0055088 "lipid homeostasis" evidence=ISS] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=ISS] [GO:2000189
"positive regulation of cholesterol homeostasis" evidence=IDA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=ISS] [GO:0070328 "triglyceride homeostasis" evidence=ISS]
[GO:0010887 "negative regulation of cholesterol storage"
evidence=IMP] [GO:0010867 "positive regulation of triglyceride
biosynthetic process" evidence=IMP] [GO:0015485 "cholesterol
binding" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0008286
GO:GO:0045893 GO:GO:0005654 EMBL:CH471064 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0045861 GO:GO:0044255 GO:GO:0042752
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0015485 GO:GO:0071222
GO:GO:0042632 GO:GO:0010887 GO:GO:0010745 GO:GO:0010875
GO:GO:0000122 GO:GO:0051006 GO:GO:0044212 GO:GO:0000790
GO:GO:0003713 GO:GO:2000189 GO:GO:0070328 GO:GO:0010867
GO:GO:0032570 GO:GO:0032270 Orphanet:803 GO:GO:0006367
GO:GO:0045723 GO:GO:0043031 GO:GO:0043277 GO:GO:0060336
eggNOG:NOG285805 GO:GO:0010870 GO:GO:0032369 GO:GO:0034145
EMBL:AC018410 PDB:3IPQ PDB:3IPS PDB:3IPU PDBsum:3IPQ PDBsum:3IPS
PDBsum:3IPU PDB:1UHL PDBsum:1UHL GO:GO:0048550 HOVERGEN:HBG108655
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845 CTD:10062
KO:K08536 OMA:CILREEA GO:GO:0032810 GO:GO:0090188 GO:GO:0090341
EMBL:U22662 EMBL:AK290614 EMBL:BC008819 EMBL:BC041172
IPI:IPI00220134 IPI:IPI00301894 IPI:IPI00796145 PIR:I38975
RefSeq:NP_001123573.1 RefSeq:NP_001123574.1 RefSeq:NP_005684.2
UniGene:Hs.438863 ProteinModelPortal:Q13133 SMR:Q13133
IntAct:Q13133 STRING:Q13133 PhosphoSite:Q13133 DMDM:23503089
PaxDb:Q13133 PRIDE:Q13133 DNASU:10062 Ensembl:ENST00000395397
Ensembl:ENST00000405853 Ensembl:ENST00000407404
Ensembl:ENST00000441012 Ensembl:ENST00000467728 GeneID:10062
KEGG:hsa:10062 UCSC:uc001nek.3 UCSC:uc001nen.4
GeneCards:GC11P047269 HGNC:HGNC:7966 HPA:CAB037109 HPA:HPA036443
MIM:602423 neXtProt:NX_Q13133 PharmGKB:PA31751 InParanoid:Q13133
PhylomeDB:Q13133 BindingDB:Q13133 ChEMBL:CHEMBL2808
EvolutionaryTrace:Q13133 GenomeRNAi:10062 NextBio:38029
ArrayExpress:Q13133 Bgee:Q13133 CleanEx:HS_NR1H3
Genevestigator:Q13133 GermOnline:ENSG00000025434 Uniprot:Q13133
Length = 447
Score = 135 (52.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN-ASEHVAAVPN 61
V +AK LP F L DQ+ +AI+ + LLE+S +N SE + + +
Sbjct: 269 VDFAKQLPGFLQLSREDQI--------ALLKTSAIE--VMLLETSRRYNPGSESITFLKD 318
Query: 62 GKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFACLKAVVLFKSETRGLKDSLQV 113
++ V +N + + R + ++ AEFA L A+ +F ++ ++D LQV
Sbjct: 319 FSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQV 378
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ L +V HHP F R+L+ R + S + +F A + + +
Sbjct: 379 ERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF-ALRLQDKKLPP 437
Query: 174 LLCDMY 179
LL +++
Sbjct: 438 LLSEIW 443
>UNIPROTKB|Q4TU03 [details] [associations]
symbol:LXRA "Liver X receptor alpha" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0046965
"retinoid X receptor binding" evidence=ISS] [GO:0044255 "cellular
lipid metabolic process" evidence=ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA] [GO:0090341
"negative regulation of secretion of lysosomal enzymes"
evidence=IEA] [GO:0090188 "negative regulation of pancreatic juice
secretion" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:0051006 "positive regulation of
lipoprotein lipase activity" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048550
"negative regulation of pinocytosis" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045861 "negative regulation of
proteolysis" evidence=IEA] [GO:0045723 "positive regulation of
fatty acid biosynthetic process" evidence=IEA] [GO:0043277
"apoptotic cell clearance" evidence=IEA] [GO:0043031 "negative
regulation of macrophage activation" evidence=IEA] [GO:0042632
"cholesterol homeostasis" evidence=IEA] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0032810 "sterol response element binding" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0032369 "negative regulation of lipid transport" evidence=IEA]
[GO:0032270 "positive regulation of cellular protein metabolic
process" evidence=IEA] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA] [GO:0010875 "positive regulation
of cholesterol efflux" evidence=IEA] [GO:0010870 "positive
regulation of receptor biosynthetic process" evidence=IEA]
[GO:0010867 "positive regulation of triglyceride biosynthetic
process" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0032570 GO:GO:0032270 GO:GO:0045723
GO:GO:0046965 GO:GO:0043031 GO:GO:0043277
GeneTree:ENSGT00680000099585 GO:GO:0010870 GO:GO:0032369
GO:GO:0034145 GO:GO:0032376 GO:GO:0048550 HOVERGEN:HBG108655
InterPro:IPR023257 PRINTS:PR02034 CTD:10062 KO:K08536 OMA:CILREEA
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:CU469364
EMBL:DQ059138 EMBL:AB254406 RefSeq:NP_001095284.1 UniGene:Ssc.48215
SMR:Q4TU03 STRING:Q4TU03 Ensembl:ENSSSCT00000014461 GeneID:397553
KEGG:ssc:397553 Uniprot:Q4TU03
Length = 447
Score = 135 (52.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN-ASEHVAAVPN 61
V +AK LP F L DQ+ +AI+ + LLE+S +N SE + + +
Sbjct: 269 VDFAKQLPGFLQLSREDQI--------ALLKTSAIE--VMLLETSRRYNPGSESITFLKD 318
Query: 62 GKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFACLKAVVLFKSETRGLKDSLQV 113
++ V +N + + R + ++ AEFA L A+ +F ++ ++D LQV
Sbjct: 319 FSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQV 378
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ L +V HHP F R+L+ R + S + +F A + + +
Sbjct: 379 ERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF-ALRLQDKKLPP 437
Query: 174 LLCDMY 179
LL +++
Sbjct: 438 LLSEIW 443
>UNIPROTKB|E2RS27 [details] [associations]
symbol:NR1H3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0090341 "negative regulation of
secretion of lysosomal enzymes" evidence=IEA] [GO:0090188 "negative
regulation of pancreatic juice secretion" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:0051006 "positive
regulation of lipoprotein lipase activity" evidence=IEA]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048550 "negative regulation of pinocytosis"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045861
"negative regulation of proteolysis" evidence=IEA] [GO:0045723
"positive regulation of fatty acid biosynthetic process"
evidence=IEA] [GO:0044255 "cellular lipid metabolic process"
evidence=IEA] [GO:0043277 "apoptotic cell clearance" evidence=IEA]
[GO:0043031 "negative regulation of macrophage activation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0034145 "positive regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0032810 "sterol response element
binding" evidence=IEA] [GO:0032570 "response to progesterone
stimulus" evidence=IEA] [GO:0032369 "negative regulation of lipid
transport" evidence=IEA] [GO:0032270 "positive regulation of
cellular protein metabolic process" evidence=IEA] [GO:0010887
"negative regulation of cholesterol storage" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0010870 "positive regulation of receptor
biosynthetic process" evidence=IEA] [GO:0010867 "positive
regulation of triglyceride biosynthetic process" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0045893 GO:GO:0046872
GO:GO:0050728 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0032570 GO:GO:0032270 GO:GO:0045723
GO:GO:0043031 GO:GO:0043277 GeneTree:ENSGT00680000099585
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 InterPro:IPR023257 PRINTS:PR02034 OMA:CILREEA
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:AAEX03011491
ProteinModelPortal:E2RS27 Ensembl:ENSCAFT00000014022 Uniprot:E2RS27
Length = 450
Score = 135 (52.6 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 49/186 (26%), Positives = 85/186 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN-ASEHVAAVPN 61
V +AK LP F L DQ+ +AI+ + LLE+S +N SE + + +
Sbjct: 272 VDFAKQLPGFLQLSREDQI--------ALLKTSAIE--VMLLETSRRYNPGSESITFLKD 321
Query: 62 GKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFACLKAVVLFKSETRGLKDSLQV 113
++ V +N + + R + ++ AEFA L A+ +F ++ ++D LQV
Sbjct: 322 FSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFALLIAISIFSADRPNVQDQLQV 381
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ L +V HHP F R+L+ R + S + +F A + + +
Sbjct: 382 ERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF-ALRLQDKKLPP 440
Query: 174 LLCDMY 179
LL +++
Sbjct: 441 LLSEIW 446
>UNIPROTKB|Q66J63 [details] [associations]
symbol:nr2c1-b "Nuclear receptor subfamily 2 group C member
1-B" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 HOVERGEN:HBG008596
KO:K08543 EMBL:BC081046 RefSeq:NP_001087654.1 UniGene:Xl.7293
ProteinModelPortal:Q66J63 SMR:Q66J63 GeneID:447478 KEGG:xla:447478
CTD:447478 Xenbase:XB-GENE-865413 Uniprot:Q66J63
Length = 637
Score = 137 (53.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 49/188 (26%), Positives = 92/188 (48%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++PSF +L + + N + +SL L + + N +AA
Sbjct: 437 LSMHWARSIPSFLSLGQENSI------SLVKACWNEL-FSLGLAQCCQVMNVETILAAFV 489
Query: 61 NG-----KASQTAAD-VR-VLNGV--LQRF--RLVG--VDPAEFACLKAVVLFKSETRGL 107
N + + ++D V+ V++ + LQ F +V VD E+A LKA+ LF + GL
Sbjct: 490 NHLHNSMQHDKLSSDKVKLVMDHIFKLQEFCNSMVKRCVDGYEYAYLKAIALFSPDHPGL 549
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
++ +E LQ++A + +V +P R RLLL R + +A + +FFA +
Sbjct: 550 ENVSHIEKLQEKAYMEFQDYVTKTYPEDTYRLSRLLLRLPALRLLNAAITEELFFAGLIG 609
Query: 168 NTSMEKLL 175
N ++ ++
Sbjct: 610 NVQIDSII 617
>UNIPROTKB|Q26622 [details] [associations]
symbol:SHR2 "Orphan steroid hormone receptor 2"
species:7668 "Strongylocentrotus purpuratus" [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005652 "nuclear lamina" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0048471 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045177
GO:GO:0030522 GO:GO:0005652 eggNOG:NOG297520 KO:K14031 EMBL:U38281
EMBL:U38528 EMBL:U38529 RefSeq:NP_001116968.1 UniGene:Spu.209
ProteinModelPortal:Q26622 SMR:Q26622 GeneID:373398 KEGG:spu:373398
CTD:373398 Uniprot:Q26622
Length = 583
Score = 136 (52.9 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 45/182 (24%), Positives = 79/182 (43%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHV-AAV 59
+++ WA++LP+F L Q + + S+ L H+ ++
Sbjct: 376 LSMHWARSLPAFQVLSADTHTSMVQKCWSELFTLGLAQCAQAMALSTILTAIVNHLQTSL 435
Query: 60 PNGKASQTAADVRVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGLKDSLQV 113
K S V+ + LQ F + VD EFA LK +VLF + GL + Q+
Sbjct: 436 QQDKLSADRVKA-VMEHIWKLQEFVTTTSKLDVDQTEFAYLKTIVLFSPDHPGLSNVRQI 494
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E Q+ A L + +P++ RF +LLL R + A ++ +FFA + N ++
Sbjct: 495 EKFQEMAISELHDYEAQTYPSKLNRFSKLLLRLPTLRLLSPAIMEELFFAGLIGNVQIDS 554
Query: 174 LL 175
++
Sbjct: 555 II 556
>ZFIN|ZDB-GENE-080403-8 [details] [associations]
symbol:nr2c2 "nuclear receptor subfamily 2, group C,
member 2" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-8 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 eggNOG:NOG297520 GeneTree:ENSGT00700000104390
HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182 KO:K08544
OMA:KADVQRP OrthoDB:EOG4Z36D8 EMBL:FP017199 IPI:IPI00511238
RefSeq:NP_001116766.1 UniGene:Dr.160181 SMR:B0UXU0
Ensembl:ENSDART00000011597 Ensembl:ENSDART00000125232 GeneID:569321
KEGG:dre:569321 NextBio:20889621 Uniprot:B0UXU0
Length = 623
Score = 136 (52.9 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 87 DPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMT 146
D E+A LKA+VLF + GL Q+E Q++AQ+ L +V+ +P + R R+LL
Sbjct: 515 DAYEYAYLKAIVLFSPDHPGLSSCSQIEKFQEKAQMELQDYVQKTYPDETYRLARILLRL 574
Query: 147 SQCRNIPSARVQHIFFAKTVANTSMEKLL 175
R + S+ + +FF + N ++ ++
Sbjct: 575 PALRLMSSSITEELFFTGLIGNVPIDSII 603
>UNIPROTKB|B4E2P3 [details] [associations]
symbol:NR5A2 "cDNA FLJ52395, highly similar to Orphan
nuclear receptor NR5A2" species:9606 "Homo sapiens" [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0042127 "regulation of
cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008206
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0042632 GO:GO:0042127 GO:GO:0030522
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 UniGene:Hs.33446 HGNC:HGNC:7984 EMBL:AC096633
EMBL:AK304365 EMBL:AK316513 IPI:IPI01009507 SMR:B4E2P3
STRING:B4E2P3 Ensembl:ENST00000544748 Uniprot:B4E2P3
Length = 469
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 64 ASQTAADVRVLNGVLQ----RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
ASQ A + L Q + R + D EF CLK +VLF + + L++ VE +Q+Q
Sbjct: 345 ASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQ 404
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + ++P Q +FG+LLL + R I +++++ + LL +M
Sbjct: 405 VNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIEM 463
>UNIPROTKB|P49116 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007399 GO:GO:0005654
GO:GO:0030154 EMBL:CH471055 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0004872 GO:GO:0003700
GO:GO:0007283 GO:GO:0003713 GO:GO:0021549 GO:GO:0046982
GO:GO:0040019 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0051321 GO:GO:0048520 EMBL:AC090954 eggNOG:NOG297520
HOVERGEN:HBG008596 HOGENOM:HOG000013058 EMBL:U10990 EMBL:L27586
EMBL:AB307708 EMBL:AK290590 EMBL:AC090937 IPI:IPI00332451
IPI:IPI00749258 PIR:A57031 PIR:I59309 RefSeq:NP_003289.2
UniGene:Hs.555973 PDB:3P0U PDBsum:3P0U ProteinModelPortal:P49116
SMR:P49116 DIP:DIP-5999N IntAct:P49116 STRING:P49116
PhosphoSite:P49116 DMDM:1351190 PaxDb:P49116 PRIDE:P49116
DNASU:7182 Ensembl:ENST00000323373 Ensembl:ENST00000393102
Ensembl:ENST00000406272 Ensembl:ENST00000425241 GeneID:7182
KEGG:hsa:7182 UCSC:uc003bzj.4 CTD:7182 GeneCards:GC03P014989
HGNC:HGNC:7972 HPA:HPA006313 MIM:601426 neXtProt:NX_P49116
PharmGKB:PA31755 KO:K08544 OMA:KADVQRP OrthoDB:EOG4Z36D8
BindingDB:P49116 ChEMBL:CHEMBL5716 ChiTaRS:NR2C2
EvolutionaryTrace:P49116 GenomeRNAi:7182 NextBio:28158
ArrayExpress:P49116 Bgee:P49116 CleanEx:HS_NR2C2
Genevestigator:P49116 GermOnline:ENSG00000177463 Uniprot:P49116
Length = 596
Score = 135 (52.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++P+F AL +D N + ++L L + + + + S +AA+
Sbjct: 396 LSMHWARSIPAFQALG-QD-----CNTSLVRACWNEL-FTLGLAQCAQVMSLSTILAAIV 448
Query: 61 NGKASQTAADV-------RVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGL 107
N + D +V+ + LQ F + +D E+A LKA+VLF + GL
Sbjct: 449 NHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGL 508
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
+ Q+E Q++AQ+ L +V+ + R R+L+ R + S + +FF +
Sbjct: 509 TSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIG 568
Query: 168 NTSMEKLL 175
N S++ ++
Sbjct: 569 NVSIDSII 576
>UNIPROTKB|F1SPJ9 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 GO:GO:0021549 GO:GO:0040019 GO:GO:0051321
GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182 KO:K08544
OMA:KADVQRP EMBL:CU856531 EMBL:CU469370 RefSeq:XP_003132435.3
Ensembl:ENSSSCT00000012690 GeneID:100513111 KEGG:ssc:100513111
Uniprot:F1SPJ9
Length = 596
Score = 135 (52.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++P+F AL +D N + ++L L + + + + S +AA+
Sbjct: 396 LSMHWARSIPAFQALG-QD-----CNTSLVRACWNEL-FTLGLAQCAQVMSLSTILAAIV 448
Query: 61 NGKASQTAADV-------RVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGL 107
N + D +V+ + LQ F + +D E+A LKA+VLF + GL
Sbjct: 449 NHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGL 508
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
+ Q+E Q++AQ+ L +V+ + R R+L+ R + S + +FF +
Sbjct: 509 TSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIG 568
Query: 168 NTSMEKLL 175
N S++ ++
Sbjct: 569 NVSIDSII 576
>UNIPROTKB|F1PXN4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
OMA:NTFGLMC EMBL:AAEX03005037 Ensembl:ENSCAFT00000017785
Uniprot:F1PXN4
Length = 519
Score = 134 (52.2 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 64 ASQTAADVRVLNGVLQ----RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
ASQ A + L Q + R + D EF CLK +VLF + + L++ VE +Q+Q
Sbjct: 395 ASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQ 454
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + ++P Q +FG+LLL + R I +++++ + LL +M
Sbjct: 455 VNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIEM 513
>UNIPROTKB|E2RI85 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051321 "meiotic cell cycle" evidence=IEA]
[GO:0048520 "positive regulation of behavior" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390
OMA:KADVQRP EMBL:AAEX03012056 Ensembl:ENSCAFT00000007359
NextBio:20858740 Uniprot:E2RI85
Length = 629
Score = 135 (52.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++P+F AL +D N + ++L L + + + + S +AA+
Sbjct: 429 LSMHWARSIPAFQALG-QD-----CNTSLVRACWNEL-FTLGLAQCAQVMSLSTILAAIV 481
Query: 61 NGKASQTAADV-------RVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGL 107
N + D +V+ + LQ F + +D E+A LKA+VLF + GL
Sbjct: 482 NHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGL 541
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
+ Q+E Q++AQ+ L +V+ + R R+L+ R + S + +FF +
Sbjct: 542 TSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIG 601
Query: 168 NTSMEKLL 175
N S++ ++
Sbjct: 602 NVSIDSII 609
>UNIPROTKB|O00482 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0008206 "bile acid metabolic process"
evidence=IEA] [GO:0042127 "regulation of cell proliferation"
evidence=IEA] [GO:0042632 "cholesterol homeostasis" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0009790 "embryo
development" evidence=TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IDA] [GO:0042592
"homeostatic process" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0005543 "phospholipid binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0045070 "positive regulation of viral
genome replication" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0008206 GO:GO:0005543 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
EMBL:CH471067 GO:GO:0042632 GO:GO:0003705 GO:GO:0042127
GO:GO:0009790 GO:GO:0044212 GO:GO:0006367 GO:GO:0042592
GO:GO:0045070 PDB:3TX7 PDBsum:3TX7 eggNOG:NOG240365 PDB:1YOK
PDB:1ZDU PDB:3PLZ PDB:4DOS PDBsum:1YOK PDBsum:1ZDU PDBsum:3PLZ
PDBsum:4DOS InterPro:IPR016355 PIRSF:PIRSF002530 PDB:1YUC PDB:4DOR
PDBsum:1YUC PDBsum:4DOR CTD:2494 HOGENOM:HOG000063718
HOVERGEN:HBG106677 KO:K08027 OrthoDB:EOG470TH1 EMBL:U80251
EMBL:AF146343 EMBL:AF124247 EMBL:AF190464 EMBL:BC118571
EMBL:BC118652 EMBL:U93553 IPI:IPI00011769 IPI:IPI00217284
IPI:IPI00217285 RefSeq:NP_003813.1 RefSeq:NP_995582.1
UniGene:Hs.33446 PDB:2A66 PDBsum:2A66 ProteinModelPortal:O00482
SMR:O00482 DIP:DIP-37952N IntAct:O00482 MINT:MINT-2997724
STRING:O00482 PhosphoSite:O00482 PRIDE:O00482
Ensembl:ENST00000236914 Ensembl:ENST00000367362 GeneID:2494
KEGG:hsa:2494 UCSC:uc001gvb.3 GeneCards:GC01P199996 HGNC:HGNC:7984
HPA:HPA005455 HPA:HPA017067 MIM:604453 neXtProt:NX_O00482
PharmGKB:PA31765 InParanoid:O00482 OMA:NTFGLMC PhylomeDB:O00482
BindingDB:O00482 ChEMBL:CHEMBL3544 EvolutionaryTrace:O00482
GenomeRNAi:2494 NextBio:9851 ArrayExpress:O00482 Bgee:O00482
CleanEx:HS_NR5A2 Genevestigator:O00482 GermOnline:ENSG00000116833
Uniprot:O00482
Length = 541
Score = 134 (52.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 64 ASQTAADVRVLNGVLQ----RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
ASQ A + L Q + R + D EF CLK +VLF + + L++ VE +Q+Q
Sbjct: 417 ASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQ 476
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + ++P Q +FG+LLL + R I +++++ + LL +M
Sbjct: 477 VNAALLDYTMCNYPQQTEKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPYNNLLIEM 535
>UNIPROTKB|F1MBX3 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 CTD:2101 KO:K08552 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:DAAA02063533 IPI:IPI00695134
RefSeq:NP_001178302.1 UniGene:Bt.15797 PRIDE:F1MBX3
Ensembl:ENSBTAT00000036417 GeneID:507834 KEGG:bta:507834
NextBio:20868240 Uniprot:F1MBX3
Length = 422
Score = 132 (51.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ + WAK++P F++L DQ+ Q SLPL + L A + V
Sbjct: 237 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDE--LAFAEDLVLDEE 294
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+A+ L +++R + + ++ E+ LKA+ L S++ ++D+ VE L++
Sbjct: 295 GARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREAL 354
Query: 121 -QVMLAQHVRTHHP---AQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+ +L P A+ R GRLLL R + H + K M KL
Sbjct: 355 HEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFL 414
Query: 177 DM 178
+M
Sbjct: 415 EM 416
>UNIPROTKB|F1RQP2 [details] [associations]
symbol:ESRRA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0019904 "protein domain
specific binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 InterPro:IPR027289
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PIRSF:PIRSF500939
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:FP312658
Ensembl:ENSSSCT00000014241 Uniprot:F1RQP2
Length = 422
Score = 132 (51.5 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ + WAK++P F++L DQ+ Q SLPL + L A + V
Sbjct: 237 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDE--LAFAEDLVLDEE 294
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+A+ L +++R + + ++ E+ LKA+ L S++ ++D+ VE L++
Sbjct: 295 GARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREAL 354
Query: 121 -QVMLAQHVRTHHP---AQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+ +L P A+ R GRLLL R + H + K M KL
Sbjct: 355 HEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFL 414
Query: 177 DM 178
+M
Sbjct: 415 EM 416
>UNIPROTKB|P11474 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0045667
"regulation of osteoblast differentiation" evidence=IEA]
[GO:0045670 "regulation of osteoclast differentiation"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0042127
GO:GO:0051216 GO:GO:0045670 GO:GO:0006367 GO:GO:0045667 CTD:2101
eggNOG:NOG282629 HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552
OrthoDB:EOG48KRBN EMBL:X51416 EMBL:L38487 EMBL:AP001453
IPI:IPI00005717 IPI:IPI00792208 PIR:A29345 RefSeq:NP_004442.3
UniGene:Hs.110849 PDB:1XB7 PDB:2PJL PDB:3D24 PDB:3K6P PDBsum:1XB7
PDBsum:2PJL PDBsum:3D24 PDBsum:3K6P ProteinModelPortal:P11474
SMR:P11474 DIP:DIP-35053N IntAct:P11474 MINT:MINT-215609
STRING:P11474 PhosphoSite:P11474 DMDM:215274146 PaxDb:P11474
PRIDE:P11474 DNASU:2101 Ensembl:ENST00000000442
Ensembl:ENST00000405666 Ensembl:ENST00000406310 GeneID:2101
KEGG:hsa:2101 UCSC:uc001nzq.1 UCSC:uc001nzr.1 GeneCards:GC11P064073
HGNC:HGNC:3471 MIM:601998 neXtProt:NX_P11474 PharmGKB:PA27887
OMA:PLPFPGS BindingDB:P11474 ChEMBL:CHEMBL3429
EvolutionaryTrace:P11474 GenomeRNAi:2101 NextBio:8503
ArrayExpress:P11474 Bgee:P11474 CleanEx:HS_ESRRA
Genevestigator:P11474 GermOnline:ENSG00000173153 Uniprot:P11474
Length = 423
Score = 132 (51.5 bits), Expect = 5.6e-08, P = 5.6e-08
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ + WAK++P F++L DQ+ Q SLPL + L A + V
Sbjct: 238 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDE--LAFAEDLVLDEE 295
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+A+ L +++R + + ++ E+ LKA+ L S++ ++D+ VE L++
Sbjct: 296 GARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREAL 355
Query: 121 -QVMLAQHVRTHHP---AQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+ +L P A+ R GRLLL R + H + K M KL
Sbjct: 356 HEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFL 415
Query: 177 DM 178
+M
Sbjct: 416 EM 417
>MGI|MGI:1352466 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=IMP]
[GO:0051321 "meiotic cell cycle" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:U32939 MGI:MGI:1352466 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0021549 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
eggNOG:NOG297520 HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182
KO:K08544 OrthoDB:EOG4Z36D8 ChiTaRS:NR2C2 EMBL:U11688 EMBL:S75970
IPI:IPI00113012 PIR:I54075 PIR:JC4299 RefSeq:NP_035760.1
UniGene:Mm.442385 UniGene:Mm.87062 ProteinModelPortal:P49117
SMR:P49117 STRING:P49117 PhosphoSite:P49117 PRIDE:P49117
Ensembl:ENSMUST00000113460 GeneID:22026 KEGG:mmu:22026
InParanoid:P49117 NextBio:301768 Bgee:P49117 CleanEx:MM_NR2C2
Genevestigator:P49117 GermOnline:ENSMUSG00000005893 Uniprot:P49117
Length = 596
Score = 134 (52.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++P+F AL +D N + ++L L + + + + S +AA+
Sbjct: 396 LSMHWARSIPAFQALG-QD-----CNTSLVRACWNEL-FTLGLAQCAQVMSLSTILAAIV 448
Query: 61 NGKASQTAADV-------RVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGL 107
N + D +V+ + LQ F + +D E+A LKA+VLF + GL
Sbjct: 449 NHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGL 508
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
+ Q+E Q++AQ+ L +V+ + R R+L+ R + S + +FF +
Sbjct: 509 TGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIG 568
Query: 168 NTSMEKLL 175
N S++ ++
Sbjct: 569 NVSIDSII 576
>RGD|3201 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member 2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=ISO]
[GO:0051321 "meiotic cell cycle" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 eggNOG:NOG297520 HOVERGEN:HBG008596
HOGENOM:HOG000013058 CTD:7182 KO:K08544 OrthoDB:EOG4Z36D8 EMBL:L27513
IPI:IPI00213603 PIR:I80177 RefSeq:NP_059019.1 UniGene:Rn.10485
ProteinModelPortal:P55094 SMR:P55094 STRING:P55094 PhosphoSite:P55094
PRIDE:P55094 GeneID:50659 KEGG:rno:50659 UCSC:RGD:3201
InParanoid:P55094 NextBio:610474 ArrayExpress:P55094
Genevestigator:P55094 GermOnline:ENSRNOG00000010536 Uniprot:P55094
Length = 596
Score = 134 (52.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++P+F AL +D N + ++L L + + + + S +AA+
Sbjct: 396 LSMHWARSIPAFQALG-QD-----CNTSLVRACWNEL-FTLGLAQCAQVMSLSTILAAIV 448
Query: 61 NGKASQTAADV-------RVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGL 107
N + D +V+ + LQ F + +D E+A LKA+VLF + GL
Sbjct: 449 NHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGHEYAYLKAIVLFSPDHPGL 508
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
+ Q+E Q++AQ+ L +V+ + R R+L+ R + S + +FF +
Sbjct: 509 TGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIG 568
Query: 168 NTSMEKLL 175
N S++ ++
Sbjct: 569 NVSIDSII 576
>UNIPROTKB|G3V7F5 [details] [associations]
symbol:Nr2c2 "RCG56527, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048520 "positive regulation of behavior"
evidence=IEA] [GO:0051321 "meiotic cell cycle" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:CH473957 GeneTree:ENSGT00700000104390 OMA:KADVQRP
Ensembl:ENSRNOT00000014353 Uniprot:G3V7F5
Length = 596
Score = 134 (52.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 46/188 (24%), Positives = 90/188 (47%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+++ WA+++P+F AL +D N + ++L L + + + + S +AA+
Sbjct: 396 LSMHWARSIPAFQALG-QD-----CNTSLVRACWNEL-FTLGLAQCAQVMSLSTILAAIV 448
Query: 61 NGKASQTAADV-------RVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGL 107
N + D +V+ + LQ F + +D E+A LKA+VLF + GL
Sbjct: 449 NHLQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGL 508
Query: 108 KDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVA 167
+ Q+E Q++AQ+ L +V+ + R R+L+ R + S + +FF +
Sbjct: 509 TGTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGLIG 568
Query: 168 NTSMEKLL 175
N S++ ++
Sbjct: 569 NVSIDSII 576
>ZFIN|ZDB-GENE-000112-47 [details] [associations]
symbol:ppardb "peroxisome proliferator-activated
receptor delta b" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-000112-47 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104361 HOGENOM:HOG000261626
HOVERGEN:HBG106004 KO:K04504 EMBL:CU302443 EMBL:BC162172
EMBL:BC162174 IPI:IPI00505722 RefSeq:NP_571543.1 UniGene:Dr.27180
SMR:A9C4A5 STRING:A9C4A5 Ensembl:ENSDART00000128783
Ensembl:ENSDART00000132584 GeneID:30754 KEGG:dre:30754 CTD:30754
OMA:NTTHEPS NextBio:20807098 Uniprot:A9C4A5
Length = 517
Score = 133 (51.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 52/190 (27%), Positives = 83/190 (43%)
Query: 4 KWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNGK 63
++AKN+P F L DQV AI LP L N + A NGK
Sbjct: 338 EFAKNIPGFVDLFLNDQV-----TLLKYGVHEAIFAMLP-----SLMNKDGLLVA--NGK 385
Query: 64 ASQTAADVRVL----NGVLQ-------RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQ 112
T +R L + +++ +F + +D ++ A A ++ + GL + Q
Sbjct: 386 GFVTREFLRSLRKPFSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLMNVKQ 445
Query: 113 VENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHI-FFAKTVANTSM 171
VE +QD L QH++ HHP F +LL + R + + Q + KT + TS+
Sbjct: 446 VEQIQDGILQALDQHLQVHHPDSSHLFPKLLQKMADLRQLVTENAQLVQMIKKTESETSL 505
Query: 172 EKLLCDMYKN 181
LL ++YK+
Sbjct: 506 HPLLQEIYKD 515
>UNIPROTKB|Q9BG96 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9600 "Pongo pygmaeus" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 eggNOG:NOG238310
HOGENOM:HOG000231151 EMBL:AF322893 ProteinModelPortal:Q9BG96
STRING:Q9BG96 InParanoid:Q9BG96 Uniprot:Q9BG96
Length = 470
Score = 122 (48.0 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 33/134 (24%), Positives = 59/134 (44%)
Query: 45 ESSPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSET 104
E P+ H+A + +A+ V+ + L + + + E+A LK VLF +
Sbjct: 332 EPLPVPTLQPHLAPPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNRDV 391
Query: 105 RGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAK 164
GL+ ++ LQ Q +L++H R H RF L R I + + +FF
Sbjct: 392 PGLQCVKYIQGLQWGTQQILSEHTRMTHQGPHDRFIELNSALFLLRFINANVIAELFFRP 451
Query: 165 TVANTSMEKLLCDM 178
+ SM+ ++ +M
Sbjct: 452 IIGTVSMDDMMLEM 465
Score = 40 (19.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 266 LRFVKYLPCFQVLPLDQQLV 285
>UNIPROTKB|Q9BG97 [details] [associations]
symbol:NR0B1 "Nuclear receptor subfamily 0 group B member
1" species:9598 "Pan troglodytes" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006694
"steroid biosynthetic process" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] [GO:0008406 "gonad development"
evidence=ISS] [GO:0008584 "male gonad development" evidence=ISS]
[GO:0016020 "membrane" evidence=ISS] [GO:0019904 "protein domain
specific binding" evidence=ISS] [GO:0030325 "adrenal gland
development" evidence=ISS] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISS] [GO:0032448 "DNA hairpin
binding" evidence=ISS] [GO:0033144 "negative regulation of
intracellular steroid hormone receptor signaling pathway"
evidence=ISS] [GO:0035258 "steroid hormone receptor binding"
evidence=ISS] [GO:0042788 "polysomal ribosome" evidence=ISS]
[GO:0042803 "protein homodimerization activity" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398 SMART:SM00430
GO:GO:0005634 GO:GO:0019904 GO:GO:0045892 GO:GO:0042803
GO:GO:0008104 GO:GO:0016020 GO:GO:0006694 GO:GO:0030325
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0003723 GO:GO:0042788 GO:GO:0008584
GO:GO:0033144 HOVERGEN:HBG005453 GO:GO:0032448 GO:GO:0035258
InterPro:IPR025900 Pfam:PF14046 eggNOG:NOG238310
HOGENOM:HOG000231151 OrthoDB:EOG48D0V9 EMBL:AF322892
UniGene:Ptr.6300 ProteinModelPortal:Q9BG97 STRING:Q9BG97
InParanoid:Q9BG97 Uniprot:Q9BG97
Length = 470
Score = 122 (48.0 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 33/134 (24%), Positives = 59/134 (44%)
Query: 45 ESSPLFNASEHVAAVPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSET 104
E P+ H+A + +A+ V+ + L + + + E+A LK VLF +
Sbjct: 332 EPLPVPTLQPHLAPPAEARKVPSASQVQAIKCFLSKCWSLNISTKEYAYLKGTVLFNPDV 391
Query: 105 RGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAK 164
GL+ ++ LQ Q +L++H R H RF L R I + + +FF
Sbjct: 392 PGLQCVKYIQGLQWGTQQILSEHTRMTHQGPHDRFIELNSTLFLLRFINANVIAELFFRP 451
Query: 165 TVANTSMEKLLCDM 178
+ SM+ ++ +M
Sbjct: 452 IIGTVSMDDMMLEM 465
Score = 40 (19.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 266 LRFVKYLPCFQVLPLDQQLV 285
>UNIPROTKB|F1STR7 [details] [associations]
symbol:NR0B2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043433 "negative regulation of sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0003677 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043433 GeneTree:ENSGT00390000015719 KO:K08563 OMA:HRTCREA
EMBL:FP015947 RefSeq:XP_003127768.1 UniGene:Ssc.33438
ProteinModelPortal:F1STR7 Ensembl:ENSSSCT00000003959
GeneID:100526226 KEGG:ssc:100526226 ArrayExpress:F1STR7
Uniprot:F1STR7
Length = 260
Score = 127 (49.8 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 47/183 (25%), Positives = 78/183 (42%)
Query: 7 KNLPSFAALPFRDQ---------VIXXXXXXXXXXXXNAIQWSLP-LLESSPLFNASEHV 56
+NLPSF LP +DQ + + +P +L+ L S
Sbjct: 74 RNLPSFCQLPPQDQRQLLRGCWGPLFLLGLAQDIVTFEVAEVPVPSILKKILLEEPSSGA 133
Query: 57 AA-VPNGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVEN 115
+ P + + A V+ L L+ + + P E+A LK +LF + GL S + +
Sbjct: 134 GSGQPLDRPQPSLAAVQWLQCCLESLWSLELGPKEYAYLKGTILFNPDVPGLYASSHIGH 193
Query: 116 LQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLL 175
LQ +A L + + PA +R R+LL S ++IP + +FF + + + LL
Sbjct: 194 LQHEAHQALWEVLEPWCPAGQSRLARVLLAASTLKSIPPTLLGDLFFRPVIGDVDIVGLL 253
Query: 176 CDM 178
DM
Sbjct: 254 EDM 256
>MGI|MGI:1346831 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0030278 "regulation of ossification" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISO] [GO:0045670 "regulation of osteoclast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051216 "cartilage development" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1346831
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 CTD:2101 eggNOG:NOG282629 HOGENOM:HOG000233467
HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN OMA:PLPFPGS
EMBL:U85259 EMBL:AK156371 EMBL:BC138586 EMBL:BC171958
IPI:IPI00762735 RefSeq:NP_031979.2 UniGene:Mm.386776
ProteinModelPortal:O08580 SMR:O08580 IntAct:O08580 STRING:O08580
PhosphoSite:O08580 PRIDE:O08580 Ensembl:ENSMUST00000025906
GeneID:26379 KEGG:mmu:26379 GeneTree:ENSGT00700000104391
InParanoid:B2RRU9 ChEMBL:CHEMBL1914280 NextBio:304289 Bgee:O08580
CleanEx:MM_ESRRA Genevestigator:O08580
GermOnline:ENSMUSG00000024955 Uniprot:O08580
Length = 422
Score = 131 (51.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 44/183 (24%), Positives = 78/183 (42%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ + WAK++P F++L DQ+ Q SLPL + +E +
Sbjct: 237 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAF---AEDLVLDE 293
Query: 61 NGKASQTAADV-RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
G + D+ L +++R + + ++ E+ LKA+ L S++ ++D+ VE L++
Sbjct: 294 EGARAAGLGDLGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREA 353
Query: 120 A-QVMLAQHVRTHHP---AQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLL 175
+ +L P A+ R GRLLL R + H + K M KL
Sbjct: 354 LHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLF 413
Query: 176 CDM 178
+M
Sbjct: 414 LEM 416
>RGD|1583866 [details] [associations]
symbol:Esrra "estrogen related receptor, alpha" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0030278 "regulation of ossification"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045670 "regulation of
osteoclast differentiation" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0051216 "cartilage
development" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:1583866 GO:GO:0005634 GO:GO:0045893 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0042127 GO:GO:0051216 GO:GO:0045670
GO:GO:0045667 HSSP:P11474 CTD:2101 eggNOG:NOG282629
HOGENOM:HOG000233467 HOVERGEN:HBG108344 KO:K08552 OrthoDB:EOG48KRBN
OMA:PLPFPGS GeneTree:ENSGT00700000104391 EMBL:AY280663
EMBL:BC104701 IPI:IPI00371457 RefSeq:NP_001008511.2
UniGene:Rn.130171 ProteinModelPortal:Q5QJV7 SMR:Q5QJV7
STRING:Q5QJV7 PhosphoSite:Q5QJV7 PRIDE:Q5QJV7
Ensembl:ENSRNOT00000028697 GeneID:293701 KEGG:rno:293701
UCSC:RGD:1583866 InParanoid:Q5QJV7 NextBio:636801
Genevestigator:Q5QJV7 Uniprot:Q5QJV7
Length = 422
Score = 131 (51.2 bits), Expect = 7.1e-08, P = 7.1e-08
Identities = 44/183 (24%), Positives = 78/183 (42%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ + WAK++P F++L DQ+ Q SLPL + +E +
Sbjct: 237 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDELAF---AEDLVLDE 293
Query: 61 NGKASQTAADV-RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
G + D+ L +++R + + ++ E+ LKA+ L S++ ++D+ VE L++
Sbjct: 294 EGARAAGLGDLGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREA 353
Query: 120 A-QVMLAQHVRTHHP---AQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLL 175
+ +L P A+ R GRLLL R + H + K M KL
Sbjct: 354 LHEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLF 413
Query: 176 CDM 178
+M
Sbjct: 414 LEM 416
>UNIPROTKB|Q800Q2 [details] [associations]
symbol:ERalpha "Estrogen receptor alpha" species:48416
"Zoarces viviparus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000536 InterPro:IPR001292 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 Pfam:PF02159
PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 GO:GO:0030284
HSSP:P03372 EMBL:AY223902 ProteinModelPortal:Q800Q2 SMR:Q800Q2
Uniprot:Q800Q2
Length = 570
Score = 132 (51.5 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 48/188 (25%), Positives = 77/188 (40%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK LP F L DQV I W +F A + + G
Sbjct: 318 IAWAKKLPGFLQLGLHDQVQLLESSWLEVLMIGLI-WRSIHCPGKLIF-AQDLILDRNEG 375
Query: 63 KASQTAADV-RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSET--------RGLKDSLQV 113
+ A++ +L RFRL+ + P EF CLKA++L S L D+ V
Sbjct: 376 DCVEGMAEIFDMLLATTSRFRLLKLKPEEFVCLKAIILLNSGAFSFCTATMEPLHDTAAV 435
Query: 114 ENLQDQAQVMLAQHVRTHHPA---QPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTS 170
+++ D L H+ + Q R +LLL+ S R++ + ++H++ K
Sbjct: 436 QHMLDTITDTLIHHIGQSGCSVQQQSRRQAQLLLLLSHIRHMSNKGMEHLYSMKCKNKVP 495
Query: 171 MEKLLCDM 178
+ LL +M
Sbjct: 496 LYDLLLEM 503
>UNIPROTKB|F1NVB5 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008206
"bile acid metabolic process" evidence=IEA] [GO:0042127 "regulation
of cell proliferation" evidence=IEA] [GO:0042632 "cholesterol
homeostasis" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045070 "positive regulation
of viral genome replication" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0008206 GO:GO:0005543
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 GO:GO:0042632 GO:GO:0042127
GO:GO:0044212 GO:GO:0045070 GeneTree:ENSGT00670000097927
InterPro:IPR016355 PIRSF:PIRSF002530 IPI:IPI00679374 OMA:NTFGLMC
EMBL:AADN02033799 EMBL:AADN02033800 EMBL:AADN02033801
EMBL:AADN02033802 EMBL:AADN02033803 Ensembl:ENSGALT00000003418
ArrayExpress:F1NVB5 Uniprot:F1NVB5
Length = 501
Score = 131 (51.2 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 34/119 (28%), Positives = 57/119 (47%)
Query: 64 ASQTAADVRVLNGVLQ----RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
ASQ A + L Q + R + D EF CLK +VLF + + L++ VE +Q+Q
Sbjct: 377 ASQAGATLNNLMSHAQELVAKLRSLQFDLREFVCLKFLVLFSLDVKNLENFQLVEGVQEQ 436
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + ++P Q +FG+LLL + R I +++++ + LL +M
Sbjct: 437 VNAALLDYTMCNYPQQTDKFGQLLLRLPEIRAISMQAEEYLYYKHLNGDVPCNNLLIEM 495
>UNIPROTKB|F1PFF7 [details] [associations]
symbol:ESRRA "Steroid hormone receptor ERR1" species:9615
"Canis lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 InterPro:IPR027289 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PIRSF:PIRSF500939 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 OMA:PLPFPGS
GeneTree:ENSGT00700000104391 EMBL:AAEX03011644
Ensembl:ENSCAFT00000022969 Uniprot:F1PFF7
Length = 613
Score = 132 (51.5 bits), Expect = 9.9e-08, P = 9.9e-08
Identities = 45/182 (24%), Positives = 78/182 (42%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVP 60
+ + WAK++P F++L DQ+ Q SLPL + L A + V
Sbjct: 428 VTISWAKSIPGFSSLSLSDQMSVLQSVWMEVLVLGVAQRSLPLQDE--LAFAEDLVLDEE 485
Query: 61 NGKASQTAADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQA 120
+A+ L +++R + + ++ E+ LKA+ L S++ ++D+ VE L++
Sbjct: 486 GARAAGLGELGAALLQLVRRLQALRLEREEYVLLKALALANSDSVHIEDAEAVEQLREAL 545
Query: 121 -QVMLAQHVRTHHP---AQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLC 176
+ +L P A+ R GRLLL R + H + K M KL
Sbjct: 546 HEALLEYEAGRAGPGGGAERRRAGRLLLTLPLLRQTAGKVLAHFYGVKLEGKVPMHKLFL 605
Query: 177 DM 178
+M
Sbjct: 606 EM 607
>ZFIN|ZDB-GENE-040616-3 [details] [associations]
symbol:esrrd "estrogen-related receptor delta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040616-3 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104391 EMBL:CABZ01076181
EMBL:CABZ01076182 IPI:IPI00898096 Ensembl:ENSDART00000125432
Bgee:F1Q8K8 Uniprot:F1Q8K8
Length = 431
Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 45/179 (25%), Positives = 75/179 (41%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK++P F AL DQ+ N + W L F +E++ N
Sbjct: 253 IGWAKHIPGFCALSLLDQMALLQSGWMETLLLN-VAWRSQALAEELQF--AENLRL--NE 307
Query: 63 KASQTAA--DV-RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
SQ A D+ L + R++ + + EF LKA+ L S+ ++ + V+ QD
Sbjct: 308 SQSQAAGLHDLYTALRHLTCRYQQMSLKQEEFIILKAMALANSDAENVEGAEAVQCFQDA 367
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + + HP++ R GR+L+ R + V+ T + M KL +M
Sbjct: 368 LHEALQEFEISQHPSEAHRAGRMLMTLPLLRQTANRSVRCFRRLHTDGHVPMHKLFLEM 426
>ZFIN|ZDB-GENE-041210-198 [details] [associations]
symbol:nr2c1 "nuclear receptor subfamily 2, group
C, member 1" species:7955 "Danio rerio" [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041210-198 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596
OMA:MEHIWRM EMBL:BX640593 IPI:IPI00494218 UniGene:Dr.42016
SMR:Q5RH32 Ensembl:ENSDART00000066948 Ensembl:ENSDART00000128968
InParanoid:Q5RH32 Uniprot:Q5RH32
Length = 600
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 42/182 (23%), Positives = 82/182 (45%)
Query: 1 MAVKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHV-AAV 59
+++ WA+++P+F AL + + Q S + + L H+ ++
Sbjct: 400 LSMHWARSIPAFQALGSENGITLMKACWNELFALGLAQCSHIMNVETILTAIINHLQTSL 459
Query: 60 PNGKASQTAADVRVLNGV--LQRF----RLVGVDPAEFACLKAVVLFKSETRGLKDSLQV 113
K S +V+ + +Q F + D E+A LKAVVLF + + +LQ+
Sbjct: 460 DEEKLSPERVK-QVMEHIWRMQEFCNSMSRMSPDAYEYAYLKAVVLFSPDHSAVDGTLQI 518
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E Q++A + L +V +P R +LL+ R + +A + +FFA + N ++
Sbjct: 519 ERFQEKAYMELQDYVSKVYPEDTYRLSKLLVRLPALRLMSAAVTEELFFAGLIGNVQIDS 578
Query: 174 LL 175
++
Sbjct: 579 II 580
>UNIPROTKB|F1MCM4 [details] [associations]
symbol:NR5A2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045070 "positive
regulation of viral genome replication" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042632 "cholesterol homeostasis" evidence=IEA] [GO:0042127
"regulation of cell proliferation" evidence=IEA] [GO:0008206 "bile
acid metabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005737 GO:GO:0008206
GO:GO:0005543 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0042632
GO:GO:0042127 GO:GO:0044212 GO:GO:0045070
GeneTree:ENSGT00670000097927 InterPro:IPR016355 PIRSF:PIRSF002530
CTD:2494 KO:K08027 OMA:NTFGLMC EMBL:DAAA02043946 EMBL:DAAA02043947
EMBL:DAAA02043948 EMBL:DAAA02043949 EMBL:DAAA02043950
EMBL:DAAA02043951 IPI:IPI01004030 RefSeq:NP_001193745.1
UniGene:Bt.107646 UniGene:Bt.10845 UniGene:Bt.97978
Ensembl:ENSBTAT00000012207 GeneID:541305 KEGG:bta:541305
NextBio:20879130 ArrayExpress:F1MCM4 Uniprot:F1MCM4
Length = 541
Score = 130 (50.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 33/119 (27%), Positives = 57/119 (47%)
Query: 64 ASQTAADVRVLNGVLQ----RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
ASQ A + L Q + R + D EF CLK +VLF + + L++ VE +Q+Q
Sbjct: 417 ASQAGATLNNLMSHAQELVAKLRSLQFDQREFVCLKFLVLFSLDVKNLENFQLVEGVQEQ 476
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + ++P Q +FG+LLL + R + +++++ + LL +M
Sbjct: 477 VNAALLDYTVCNYPQQTEKFGQLLLRLPEIRALSMQAEEYLYYKHLNGDVPYNNLLIEM 535
>RGD|61909 [details] [associations]
symbol:Nr1h3 "nuclear receptor subfamily 1, group H, member 3"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000790 "nuclear chromatin" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA;TAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA;ISO] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEP] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEP] [GO:0010867 "positive regulation of
triglyceride biosynthetic process" evidence=IEA;ISO] [GO:0010870
"positive regulation of receptor biosynthetic process"
evidence=IEA;ISO] [GO:0010875 "positive regulation of cholesterol
efflux" evidence=IEA;ISO] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA;ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISO] [GO:0032270
"positive regulation of cellular protein metabolic process"
evidence=IEA;ISO] [GO:0032369 "negative regulation of lipid
transport" evidence=IEA;ISO] [GO:0032376 "positive regulation of
cholesterol transport" evidence=ISO] [GO:0032570 "response to
progesterone stimulus" evidence=IEA;ISO] [GO:0032810 "sterol
response element binding" evidence=IEA;ISO] [GO:0034145 "positive
regulation of toll-like receptor 4 signaling pathway"
evidence=IEA;ISO] [GO:0042632 "cholesterol homeostasis"
evidence=IEA;ISO] [GO:0043031 "negative regulation of macrophage
activation" evidence=IEA;ISO] [GO:0043277 "apoptotic cell clearance"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0044255 "cellular lipid metabolic
process" evidence=IEA;ISO] [GO:0045723 "positive regulation of fatty
acid biosynthetic process" evidence=IEA;ISO] [GO:0045861 "negative
regulation of proteolysis" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046965 "retinoid
X receptor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0048550 "negative
regulation of pinocytosis" evidence=IEA;ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA;ISO] [GO:0051006
"positive regulation of lipoprotein lipase activity"
evidence=IEA;ISO] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0055092 "sterol homeostasis" evidence=ISO] [GO:0070328
"triglyceride homeostasis" evidence=IEA;ISO] [GO:0071222 "cellular
response to lipopolysaccharide" evidence=IEA;ISO] [GO:0090188
"negative regulation of pancreatic juice secretion"
evidence=IEA;ISO] [GO:0090341 "negative regulation of secretion of
lysosomal enzymes" evidence=IEA;ISO] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61909 GO:GO:0005634 GO:GO:0005737
GO:GO:0008286 GO:GO:0045893 GO:GO:0046872 GO:GO:0050728
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0046982 GO:GO:0032570 GO:GO:0032270
GO:GO:0045723 GO:GO:0043031 GO:GO:0043277 eggNOG:NOG285805
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845 GO:GO:0032810
GO:GO:0090188 GO:GO:0090341 EMBL:U11685 IPI:IPI00207179 PIR:A56043
UniGene:Rn.11209 ProteinModelPortal:Q62685 SMR:Q62685 STRING:Q62685
PhosphoSite:Q62685 PRIDE:Q62685 UCSC:RGD:61909 InParanoid:Q62685
ArrayExpress:Q62685 Genevestigator:Q62685
GermOnline:ENSRNOG00000013172 Uniprot:Q62685
Length = 445
Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/186 (25%), Positives = 85/186 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN-ASEHVAAVPN 61
V +AK LP F L DQ+ +AI+ + LLE+S +N SE + + +
Sbjct: 267 VDFAKQLPGFLQLSREDQI--------ALLKTSAIE--VMLLETSRRYNPGSESITFLKD 316
Query: 62 GKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFACLKAVVLFKSETRGLKDSLQV 113
++ V +N + + R + ++ AEFA L A+ +F ++ ++D LQV
Sbjct: 317 FSYNREDFAKAGLQVEFINPIFEFSRSMNELQLNDAEFALLIAISIFSADRPNVQDQLQV 376
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ L +V +HP F R+L+ R + S + +F A + + +
Sbjct: 377 ERLQHTYVEALHAYVSINHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF-ALRLQDKKLPP 435
Query: 174 LLCDMY 179
LL +++
Sbjct: 436 LLSEIW 441
>UNIPROTKB|Q62685 [details] [associations]
symbol:Nr1h3 "Oxysterols receptor LXR-alpha" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61909 GO:GO:0005634 GO:GO:0005737
GO:GO:0008286 GO:GO:0045893 GO:GO:0046872 GO:GO:0050728
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629
GO:GO:0045861 GO:GO:0044255 GO:GO:0042632 GO:GO:0000122
GO:GO:0051006 GO:GO:0000790 GO:GO:2000189 GO:GO:0070328
GO:GO:0010867 GO:GO:0046982 GO:GO:0032570 GO:GO:0032270
GO:GO:0045723 GO:GO:0043031 GO:GO:0043277 eggNOG:NOG285805
GO:GO:0010870 GO:GO:0032369 GO:GO:0034145 GO:GO:0032376
GO:GO:0048550 HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7
InterPro:IPR023257 PRINTS:PR02034 HOGENOM:HOG000220845
GO:GO:0032810 GO:GO:0090188 GO:GO:0090341 EMBL:U11685
IPI:IPI00207179 PIR:A56043 UniGene:Rn.11209
ProteinModelPortal:Q62685 SMR:Q62685 STRING:Q62685
PhosphoSite:Q62685 PRIDE:Q62685 UCSC:RGD:61909 InParanoid:Q62685
ArrayExpress:Q62685 Genevestigator:Q62685
GermOnline:ENSRNOG00000013172 Uniprot:Q62685
Length = 445
Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 48/186 (25%), Positives = 85/186 (45%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFN-ASEHVAAVPN 61
V +AK LP F L DQ+ +AI+ + LLE+S +N SE + + +
Sbjct: 267 VDFAKQLPGFLQLSREDQI--------ALLKTSAIE--VMLLETSRRYNPGSESITFLKD 316
Query: 62 GKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFACLKAVVLFKSETRGLKDSLQV 113
++ V +N + + R + ++ AEFA L A+ +F ++ ++D LQV
Sbjct: 317 FSYNREDFAKAGLQVEFINPIFEFSRSMNELQLNDAEFALLIAISIFSADRPNVQDQLQV 376
Query: 114 ENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEK 173
E LQ L +V +HP F R+L+ R + S + +F A + + +
Sbjct: 377 ERLQHTYVEALHAYVSINHPHDRLMFPRMLMKLVSLRTLSSVHSEQVF-ALRLQDKKLPP 435
Query: 174 LLCDMY 179
LL +++
Sbjct: 436 LLSEIW 441
>UNIPROTKB|E9PLL4 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC018410
InterPro:IPR023257 PRINTS:PR02034 HGNC:HGNC:7966 IPI:IPI00976161
ProteinModelPortal:E9PLL4 SMR:E9PLL4 Ensembl:ENST00000481889
ArrayExpress:E9PLL4 Bgee:E9PLL4 Uniprot:E9PLL4
Length = 466
Score = 120 (47.3 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 38/146 (26%), Positives = 69/146 (47%)
Query: 43 LLESSPLFN-ASEHVAAVPNGKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFAC 93
LLE+S +N SE + + + ++ V +N + + R + ++ AEFA
Sbjct: 318 LLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFAL 377
Query: 94 LKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIP 153
L A+ +F ++ ++D LQVE LQ L +V HHP F R+L+ R +
Sbjct: 378 LIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLS 437
Query: 154 SARVQHIFFAKTVANTSMEKLLCDMY 179
S + +F A + + + LL +++
Sbjct: 438 SVHSEQVF-ALRLQDKKLPPLLSEIW 462
Score = 42 (19.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 3 VKWAKNLPSFAALPFRDQV 21
V +AK LP F L DQ+
Sbjct: 224 VDFAKQLPGFLQLSREDQI 242
>UNIPROTKB|O42101 [details] [associations]
symbol:NR5A2 "Nuclear receptor subfamily 5 group A member
2" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 InterPro:IPR016355 PIRSF:PIRSF002530 EMBL:AB002403
IPI:IPI00679374 RefSeq:NP_990409.1 UniGene:Gga.572
ProteinModelPortal:O42101 SMR:O42101 STRING:O42101 GeneID:395961
KEGG:gga:395961 CTD:2494 HOGENOM:HOG000063718 HOVERGEN:HBG106677
InParanoid:O42101 KO:K08027 OrthoDB:EOG470TH1 NextBio:20816026
Uniprot:O42101
Length = 501
Score = 126 (49.4 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 34/119 (28%), Positives = 56/119 (47%)
Query: 64 ASQTAADVRVLNGVLQ----RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQ 119
ASQ A + L Q + R + D EF CLK +VLF + + L++ VE +Q+Q
Sbjct: 377 ASQAGATLNNLMSHAQELVAKLRSLQFDLREFVCLKFLVLFSLDVKNLENFQLVEGVQEQ 436
Query: 120 AQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
L + ++P Q +FG+LLL + R I ++++ + LL +M
Sbjct: 437 VNAALLDYTMCNYPQQTDKFGQLLLRLPEIRAISMQAEEYLYCKHLNGDVPCNNLLIEM 495
>UNIPROTKB|A0JNE3 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0016605 "PML body" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG297520 KO:K08543
EMBL:BC126643 IPI:IPI00685366 RefSeq:NP_001071372.1
UniGene:Bt.28215 ProteinModelPortal:A0JNE3 SMR:A0JNE3 STRING:A0JNE3
GeneID:511407 KEGG:bta:511407 CTD:7181 HOGENOM:HOG000013058
InParanoid:A0JNE3 OrthoDB:EOG476JZT NextBio:20869910 Uniprot:A0JNE3
Length = 608
Score = 123 (48.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E+A LKA+VLF + GL++ Q+E Q++A V ++ +P R RLLL
Sbjct: 499 IDGYEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLR 558
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
R + + + +FF + N ++ ++ + K
Sbjct: 559 LPALRLMNATITEELFFKGLIGNVRIDSVIPHILK 593
>UNIPROTKB|F1N0I2 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 IPI:IPI00685366
UniGene:Bt.28215 OMA:QNSNEMS EMBL:DAAA02012799 PRIDE:F1N0I2
Ensembl:ENSBTAT00000023577 Uniprot:F1N0I2
Length = 608
Score = 123 (48.4 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E+A LKA+VLF + GL++ Q+E Q++A V ++ +P R RLLL
Sbjct: 499 IDGYEYAYLKAIVLFSPDHPGLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLR 558
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
R + + + +FF + N ++ ++ + K
Sbjct: 559 LPALRLMNATITEELFFKGLIGNVRIDSVIPHILK 593
>UNIPROTKB|O19052 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:9986 "Oryctolagus cuniculus" [GO:0003677 "DNA
binding" evidence=ISS] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=ISS]
[GO:0032526 "response to retinoic acid" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003077
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0032526 GO:GO:0030522 GO:GO:0030374 eggNOG:NOG266867
HOGENOM:HOG000261626 HOVERGEN:HBG106004 InterPro:IPR022590
Pfam:PF12577 OrthoDB:EOG41ZF9W EMBL:U84893 UniGene:Ocu.2191
ProteinModelPortal:O19052 SMR:O19052 STRING:O19052 Uniprot:O19052
Length = 475
Score = 110 (43.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 371 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPEASQLF 430
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 431 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 473
Score = 52 (23.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P F +L DQV
Sbjct: 296 EYAKNIPGFVSLDLNDQV 313
>MGI|MGI:1352465 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1352465 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0048386 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596 KO:K08543 CTD:7181
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:U28280 EMBL:U28269 EMBL:U28270
EMBL:U28271 EMBL:U28272 EMBL:U28273 EMBL:U28274 EMBL:U28275
EMBL:U28276 EMBL:U28277 EMBL:U28278 EMBL:U28279 EMBL:U28265
EMBL:Y11436 EMBL:U30482 EMBL:L26957 EMBL:AK146891 EMBL:AK149374
EMBL:AC127596 EMBL:AC138026 EMBL:BC090662 EMBL:BC094580
IPI:IPI00314621 IPI:IPI00656276 RefSeq:NP_035759.3
UniGene:Mm.107483 ProteinModelPortal:Q505F1 SMR:Q505F1
DIP:DIP-29275N STRING:Q505F1 PhosphoSite:Q505F1 PaxDb:Q505F1
PRIDE:Q505F1 Ensembl:ENSMUST00000092213 Ensembl:ENSMUST00000099343
Ensembl:ENSMUST00000105290 GeneID:22025 KEGG:mmu:22025
InParanoid:Q0VGP8 NextBio:301764 Bgee:Q505F1 CleanEx:MM_NR2C1
Genevestigator:Q505F1 GermOnline:ENSMUSG00000005897 Uniprot:Q505F1
Length = 590
Score = 116 (45.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E+A LKA+VLF + GL++ +E Q++A V ++ +P R RLLL
Sbjct: 481 IDGHEYAYLKAIVLFSPDHPGLENMELIERFQEKAYVEFQDYITRTYPDDTYRLSRLLLR 540
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
R + + + +FF + N ++ ++ + K
Sbjct: 541 LPALRLMNATITEELFFKGLIGNVRIDSVIPHILK 575
Score = 43 (20.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 1 MAVKWAKNLPSFAAL 15
+++ WA ++PSF AL
Sbjct: 390 LSMHWALSIPSFQAL 404
>RGD|3200 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048386 "positive regulation of retinoic
acid receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3200 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 EMBL:CH473960 HSSP:P03372 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:L26398 EMBL:BC061822
IPI:IPI00208150 RefSeq:NP_665723.1 UniGene:Rn.79894
ProteinModelPortal:Q8VIJ4 SMR:Q8VIJ4 STRING:Q8VIJ4 PhosphoSite:Q8VIJ4
PRIDE:Q8VIJ4 Ensembl:ENSRNOT00000009578 GeneID:252924 KEGG:rno:252924
UCSC:RGD:3200 InParanoid:Q8VIJ4 NextBio:624089 ArrayExpress:Q8VIJ4
Genevestigator:Q8VIJ4 Uniprot:Q8VIJ4
Length = 590
Score = 116 (45.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E+A LKA+VLF + GL++ +E Q++A V ++ +P R RLLL
Sbjct: 481 IDGHEYAYLKAIVLFSPDHPGLENMELIEKFQEKAYVEFQDYITRTYPDDTYRLSRLLLR 540
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
R + + + +FF + N ++ ++ + K
Sbjct: 541 LPALRLMNATITEELFFKGLIGNVRIDSVIPHILK 575
Score = 43 (20.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 1 MAVKWAKNLPSFAAL 15
+++ WA ++PSF AL
Sbjct: 390 LSMHWALSIPSFQAL 404
>UNIPROTKB|Q9I878 [details] [associations]
symbol:PPAR gamma "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001012 "RNA polymerase
II regulatory region DNA binding" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0008144 "drug binding" evidence=IEA] [GO:0008217 "regulation of
blood pressure" evidence=IEA] [GO:0010871 "negative regulation of
receptor biosynthetic process" evidence=IEA] [GO:0010887 "negative
regulation of cholesterol storage" evidence=IEA] [GO:0010891
"negative regulation of sequestering of triglyceride" evidence=IEA]
[GO:0015909 "long-chain fatty acid transport" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0030224 "monocyte
differentiation" evidence=IEA] [GO:0030374 "ligand-dependent
nuclear receptor transcription coactivator activity" evidence=IEA]
[GO:0030855 "epithelial cell differentiation" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0035357
"peroxisome proliferator activated receptor signaling pathway"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042953 "lipoprotein transport" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0045600 "positive regulation of
fat cell differentiation" evidence=IEA] [GO:0045713 "low-density
lipoprotein particle receptor biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046965 "retinoid X
receptor binding" evidence=IEA] [GO:0048469 "cell maturation"
evidence=IEA] [GO:0048662 "negative regulation of smooth muscle
cell proliferation" evidence=IEA] [GO:0050872 "white fat cell
differentiation" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0055098 "response to low-density lipoprotein
particle stimulus" evidence=IEA] [GO:0060336 "negative regulation
of interferon-gamma-mediated signaling pathway" evidence=IEA]
[GO:0071285 "cellular response to lithium ion" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003077 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005829
GO:GO:0005634 GO:GO:0008285 GO:GO:0051091 GO:GO:0006917
GO:GO:0032869 GO:GO:0046872 GO:GO:0008144 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0050873
GO:GO:0050872 GO:GO:0045600 GO:GO:0003682 GO:GO:0042593
GO:GO:0010887 GO:GO:0055098 GO:GO:0042953 GO:GO:0000122
GO:GO:0010891 GO:GO:0006919 GO:GO:0001012 GO:GO:0045165
GO:GO:0071285 GO:GO:0015909 eggNOG:NOG266867
GeneTree:ENSGT00700000104361 GO:GO:0060336 GO:GO:0010871
HOGENOM:HOG000261626 HOVERGEN:HBG106004 CTD:5468 KO:K08530
OMA:KTTDKSP GO:GO:0045713 InterPro:IPR022590 Pfam:PF12577
OrthoDB:EOG41ZF9W HSSP:Q96J12 EMBL:AADN02013929 EMBL:AF163811
EMBL:AF470456 EMBL:AB045597 IPI:IPI00598191 RefSeq:NP_001001460.1
UniGene:Gga.3858 SMR:Q9I878 STRING:Q9I878
Ensembl:ENSGALT00000007976 GeneID:373928 KEGG:gga:373928
InParanoid:Q9I878 NextBio:20813460 Uniprot:Q9I878
Length = 475
Score = 112 (44.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 371 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 430
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 431 AKLLQKMTDLRQIVTEHVQLLQIIKKTETDMSLHPLLQEIYKD 473
Score = 48 (22.0 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P F L DQV
Sbjct: 296 EFAKNIPGFVNLDLNDQV 313
Score = 44 (20.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 52 ASEHVAAVPNGKASQTAADVR 72
+S H +P G+A QT+ D +
Sbjct: 44 SSPHYEDIPLGRADQTSIDYK 64
>UNIPROTKB|P13056 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0048386
"positive regulation of retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471054 GO:GO:0003700 GO:GO:0000122 GO:GO:0048386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway eggNOG:NOG297520
HOVERGEN:HBG008596 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT EMBL:M21985 EMBL:M29959 EMBL:M29960 EMBL:AK291319
EMBL:AC011598 EMBL:BC040141 IPI:IPI00019051 IPI:IPI00334759
IPI:IPI00798023 PIR:A31521 PIR:A36738 PIR:B36738
RefSeq:NP_001027458.1 RefSeq:NP_001120834.1 RefSeq:NP_003288.2
UniGene:Hs.108301 UniGene:Hs.707524 ProteinModelPortal:P13056
SMR:P13056 IntAct:P13056 STRING:P13056 PhosphoSite:P13056
DMDM:226693548 PRIDE:P13056 DNASU:7181 Ensembl:ENST00000330677
Ensembl:ENST00000333003 Ensembl:ENST00000393101 GeneID:7181
KEGG:hsa:7181 UCSC:uc001tdm.4 UCSC:uc001tdn.4 UCSC:uc001tdo.4
GeneCards:GC12M095414 HGNC:HGNC:7971 HPA:CAB010395 MIM:601529
neXtProt:NX_P13056 PharmGKB:PA31754 OMA:QNSNEMS PhylomeDB:P13056
ChEMBL:CHEMBL1961787 GenomeRNAi:7181 NextBio:28152 Bgee:P13056
CleanEx:HS_NR2C1 Genevestigator:P13056 GermOnline:ENSG00000120798
Uniprot:P13056
Length = 603
Score = 116 (45.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E+A LKA+VLF + L++ Q+E Q++A V ++ +P R RLLL
Sbjct: 494 IDGYEYAYLKAIVLFSPDHPSLENMEQIEKFQEKAYVEFQDYITKTYPDDTYRLSRLLLR 553
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYK 180
R + + + +FF + N ++ ++ + K
Sbjct: 554 LPALRLMNATITEELFFKGLIGNIRIDSVIPHILK 588
Score = 43 (20.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 7/15 (46%), Positives = 12/15 (80%)
Query: 1 MAVKWAKNLPSFAAL 15
+++ WA ++PSF AL
Sbjct: 403 LSMHWALSIPSFQAL 417
>UNIPROTKB|E9PID2 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC018410
InterPro:IPR023257 PRINTS:PR02034 HGNC:HGNC:7966 IPI:IPI01011352
ProteinModelPortal:E9PID2 SMR:E9PID2 Ensembl:ENST00000527949
ArrayExpress:E9PID2 Bgee:E9PID2 Uniprot:E9PID2
Length = 296
Score = 120 (47.3 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 38/146 (26%), Positives = 69/146 (47%)
Query: 43 LLESSPLFN-ASEHVAAVPNGKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFAC 93
LLE+S +N SE + + + ++ V +N + + R + ++ AEFA
Sbjct: 148 LLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFAL 207
Query: 94 LKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIP 153
L A+ +F ++ ++D LQVE LQ L +V HHP F R+L+ R +
Sbjct: 208 LIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLS 267
Query: 154 SARVQHIFFAKTVANTSMEKLLCDMY 179
S + +F A + + + LL +++
Sbjct: 268 SVHSEQVF-ALRLQDKKLPPLLSEIW 292
>UNIPROTKB|O62807 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:9823 "Sus scrofa" [GO:0050872 "white fat cell
differentiation" evidence=ISS] [GO:0045600 "positive regulation of
fat cell differentiation" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0032526 "response to retinoic acid"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0071285
"cellular response to lithium ion" evidence=IEA] [GO:0060336
"negative regulation of interferon-gamma-mediated signaling
pathway" evidence=IEA] [GO:0055098 "response to low-density
lipoprotein particle stimulus" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0048662 "negative regulation of
smooth muscle cell proliferation" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0045713 "low-density lipoprotein particle
receptor biosynthetic process" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0042953 "lipoprotein transport"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0035357 "peroxisome proliferator activated receptor signaling
pathway" evidence=IEA] [GO:0033613 "activating transcription factor
binding" evidence=IEA] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0030224 "monocyte
differentiation" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0015909 "long-chain fatty acid transport"
evidence=IEA] [GO:0010891 "negative regulation of sequestering of
triglyceride" evidence=IEA] [GO:0010887 "negative regulation of
cholesterol storage" evidence=IEA] [GO:0010871 "negative regulation
of receptor biosynthetic process" evidence=IEA] [GO:0008217
"regulation of blood pressure" evidence=IEA] [GO:0008144 "drug
binding" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006917 "induction of apoptosis" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0001012 "RNA polymerase II regulatory region DNA binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003077 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005829 GO:GO:0005634
GO:GO:0008285 GO:GO:0051091 GO:GO:0006917 GO:GO:0032869
GO:GO:0046872 GO:GO:0003677 GO:GO:0008144 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0050873
GO:GO:0050872 GO:GO:0045600 GO:GO:0003682 GO:GO:0042593
GO:GO:0010887 GO:GO:0055098 GO:GO:0042953 GO:GO:0000122
GO:GO:0010891 GO:GO:0006919 GO:GO:0032526 GO:GO:0008217
GO:GO:0001890 GO:GO:0001012 GO:GO:0045165 GO:GO:0030374
GO:GO:0030855 GO:GO:0048469 GO:GO:0030224 GO:GO:0071285
GO:GO:0015909 eggNOG:NOG266867 GeneTree:ENSGT00700000104361
GO:GO:0060336 GO:GO:0010871 HOGENOM:HOG000261626 HOVERGEN:HBG106004
CTD:5468 KO:K08530 OMA:KTTDKSP GO:GO:0045713 InterPro:IPR022590
Pfam:PF12577 EMBL:AF059245 EMBL:AF103946 EMBL:AJ006756
EMBL:AJ006757 EMBL:AB097930 PIR:JE0280 RefSeq:NP_999544.1
UniGene:Ssc.14475 ProteinModelPortal:O62807 SMR:O62807
STRING:O62807 Ensembl:ENSSSCT00000012672 GeneID:397671
KEGG:ssc:397671 ArrayExpress:O62807 Uniprot:O62807
Length = 504
Score = 111 (44.1 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 400 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 459
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 460 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 502
Score = 49 (22.3 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P F L DQV
Sbjct: 325 EYAKNIPGFVNLDLNDQV 342
>UNIPROTKB|O18971 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:9913 "Bos taurus" [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045165 "cell fate commitment" evidence=ISS]
[GO:0030855 "epithelial cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0045598 "regulation of
fat cell differentiation" evidence=ISS] [GO:0050872 "white fat cell
differentiation" evidence=ISS] [GO:0045600 "positive regulation of
fat cell differentiation" evidence=ISS] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0032526 "response to retinoic acid" evidence=ISS] [GO:0071285
"cellular response to lithium ion" evidence=IEA] [GO:0060336
"negative regulation of interferon-gamma-mediated signaling
pathway" evidence=IEA] [GO:0055098 "response to low-density
lipoprotein particle stimulus" evidence=IEA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0048662 "negative regulation of
smooth muscle cell proliferation" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0045713 "low-density lipoprotein particle
receptor biosynthetic process" evidence=IEA] [GO:0042953
"lipoprotein transport" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0030224
"monocyte differentiation" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0015909 "long-chain fatty acid
transport" evidence=IEA] [GO:0010891 "negative regulation of
sequestering of triglyceride" evidence=IEA] [GO:0010887 "negative
regulation of cholesterol storage" evidence=IEA] [GO:0010871
"negative regulation of receptor biosynthetic process"
evidence=IEA] [GO:0008217 "regulation of blood pressure"
evidence=IEA] [GO:0008144 "drug binding" evidence=IEA] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0001012 "RNA polymerase II
regulatory region DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003077 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005829
GO:GO:0005634 GO:GO:0045892 GO:GO:0008285 GO:GO:0051091
GO:GO:0006917 GO:GO:0032869 GO:GO:0046872 GO:GO:0003677
GO:GO:0008144 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0050873 GO:GO:0050872 GO:GO:0003700
GO:GO:0045600 GO:GO:0003682 GO:GO:0042593 GO:GO:0010887
GO:GO:0055098 GO:GO:0042953 GO:GO:0000122 GO:GO:0010891
GO:GO:0006919 GO:GO:0032526 GO:GO:0008217 GO:GO:0001890
GO:GO:0001012 GO:GO:0045165 GO:GO:0030374 GO:GO:0030855
GO:GO:0048469 GO:GO:0030224 GO:GO:0071285 GO:GO:0015909
eggNOG:NOG266867 GeneTree:ENSGT00700000104361 GO:GO:0060336
GO:GO:0010871 HOGENOM:HOG000261626 HOVERGEN:HBG106004 EMBL:Y12420
EMBL:Y12419 EMBL:AY179866 EMBL:BC116098 IPI:IPI00693988
IPI:IPI00701013 PIR:JC5777 RefSeq:NP_851367.1 UniGene:Bt.3862
ProteinModelPortal:O18971 SMR:O18971 STRING:O18971 PRIDE:O18971
Ensembl:ENSBTAT00000001760 Ensembl:ENSBTAT00000044038
Ensembl:ENSBTAT00000044042 GeneID:281993 KEGG:bta:281993 CTD:5468
InParanoid:O18971 KO:K08530 OMA:KTTDKSP NextBio:20805861
GO:GO:0045713 InterPro:IPR022590 Pfam:PF12577 Uniprot:O18971
Length = 505
Score = 111 (44.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 401 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 460
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 461 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 503
Score = 49 (22.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P F L DQV
Sbjct: 326 EYAKNIPGFVNLDLNDQV 343
>UNIPROTKB|B5MBY7 [details] [associations]
symbol:NR1H3 "Oxysterols receptor LXR-alpha" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AC018410
HOVERGEN:HBG108655 OrthoDB:EOG4DV5M7 InterPro:IPR023257
PRINTS:PR02034 HOGENOM:HOG000220845 HGNC:HGNC:7966 IPI:IPI00879649
ProteinModelPortal:B5MBY7 SMR:B5MBY7 STRING:B5MBY7
Ensembl:ENST00000405576 ArrayExpress:B5MBY7 Bgee:B5MBY7
Uniprot:B5MBY7
Length = 342
Score = 120 (47.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 38/146 (26%), Positives = 69/146 (47%)
Query: 43 LLESSPLFN-ASEHVAAVPNGKASQ-----TAADVRVLNGVLQRFRLVG---VDPAEFAC 93
LLE+S +N SE + + + ++ V +N + + R + ++ AEFA
Sbjct: 194 LLETSRRYNPGSESITFLKDFSYNREDFAKAGLQVEFINPIFEFSRAMNELQLNDAEFAL 253
Query: 94 LKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRNIP 153
L A+ +F ++ ++D LQVE LQ L +V HHP F R+L+ R +
Sbjct: 254 LIAISIFSADRPNVQDQLQVERLQHTYVEALHAYVSIHHPHDRLMFPRMLMKLVSLRTLS 313
Query: 154 SARVQHIFFAKTVANTSMEKLLCDMY 179
S + +F A + + + LL +++
Sbjct: 314 SVHSEQVF-ALRLQDKKLPPLLSEIW 338
>UNIPROTKB|P57797 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:10029 "Cricetulus griseus" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISS] [GO:0032526
"response to retinoic acid" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003077
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0032526 GO:GO:0030522 GO:GO:0030374 HOVERGEN:HBG106004
CTD:5468 InterPro:IPR022590 Pfam:PF12577 EMBL:Z30972 PIR:JC4264
RefSeq:NP_001231210.1 ProteinModelPortal:P57797 SMR:P57797
PRIDE:P57797 GeneID:100689245 Uniprot:P57797
Length = 475
Score = 110 (43.8 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 371 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 430
Query: 140 GRLLLMTSQCRNIPSARVQ--HIFFAKTVANTSMEKLLCDMYKN 181
++L + R I + VQ H+ KT + S+ LL ++YK+
Sbjct: 431 AKVLQKMTDLRQIVTEHVQLLHVI-KKTETDMSLHPLLQEIYKD 473
Score = 48 (22.0 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P F L DQV
Sbjct: 296 EYAKNIPGFINLDLNDQV 313
>MGI|MGI:97747 [details] [associations]
symbol:Pparg "peroxisome proliferator activated receptor
gamma" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0001012 "RNA polymerase II regulatory region
DNA binding" evidence=IDA] [GO:0001818 "negative regulation of
cytokine production" evidence=IMP] [GO:0001890 "placenta
development" evidence=IMP] [GO:0002674 "negative regulation of
acute inflammatory response" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO;IDA;IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006917 "induction
of apoptosis" evidence=ISO] [GO:0006919 "activation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=ISO] [GO:0006954 "inflammatory response" evidence=TAS]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008217 "regulation of blood pressure"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;IMP] [GO:0010745 "negative regulation of macrophage
derived foam cell differentiation" evidence=ISO] [GO:0010871
"negative regulation of receptor biosynthetic process"
evidence=ISO] [GO:0010887 "negative regulation of cholesterol
storage" evidence=ISO] [GO:0010891 "negative regulation of
sequestering of triglyceride" evidence=ISO] [GO:0015909 "long-chain
fatty acid transport" evidence=IMP] [GO:0019216 "regulation of
lipid metabolic process" evidence=ISO] [GO:0019395 "fatty acid
oxidation" evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030224 "monocyte differentiation" evidence=ISO] [GO:0030308
"negative regulation of cell growth" evidence=ISO] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISO;IDA] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=TAS] [GO:0030855 "epithelial
cell differentiation" evidence=IGI] [GO:0032526 "response to
retinoic acid" evidence=ISO;IDA] [GO:0032869 "cellular response to
insulin stimulus" evidence=ISO] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0033993 "response
to lipid" evidence=IDA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=ISO] [GO:0042953 "lipoprotein
transport" evidence=ISO] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO;IDA] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045444 "fat cell differentiation"
evidence=IGI;IDA] [GO:0045598 "regulation of fat cell
differentiation" evidence=ISO;IGI;IDA] [GO:0045600 "positive
regulation of fat cell differentiation" evidence=IGI;IMP;IDA]
[GO:0045713 "low-density lipoprotein particle receptor biosynthetic
process" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA;IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IDA] [GO:0046321 "positive
regulation of fatty acid oxidation" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046965 "retinoid X receptor
binding" evidence=ISO] [GO:0048469 "cell maturation" evidence=ISO]
[GO:0048662 "negative regulation of smooth muscle cell
proliferation" evidence=ISO] [GO:0048714 "positive regulation of
oligodendrocyte differentiation" evidence=ISO] [GO:0050544
"arachidonic acid binding" evidence=IDA] [GO:0050872 "white fat
cell differentiation" evidence=IDA] [GO:0050873 "brown fat cell
differentiation" evidence=IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0051974 "negative regulation of telomerase
activity" evidence=ISO] [GO:0055098 "response to low-density
lipoprotein particle stimulus" evidence=ISO] [GO:0060336 "negative
regulation of interferon-gamma-mediated signaling pathway"
evidence=ISO] [GO:0071285 "cellular response to lithium ion"
evidence=IDA] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003077
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:97747 GO:GO:0005829 GO:GO:0008285 GO:GO:0005654
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0006954 GO:GO:0045944 GO:GO:0050873 GO:GO:0050872
GO:GO:0045600 GO:GO:0003682 GO:GO:0000122 Reactome:REACT_127416
GO:GO:0032526 GO:GO:0001890 GO:GO:0001012 GO:GO:0050544
GO:GO:0071407 GO:GO:0045165 GO:GO:0030374 GO:GO:0030855
GO:GO:0071285 Reactome:REACT_27166 GO:GO:0015909 eggNOG:NOG266867
GeneTree:ENSGT00700000104361 GO:GO:0001818 HOGENOM:HOG000261626
HOVERGEN:HBG106004 CTD:5468 KO:K08530 InterPro:IPR022590
Pfam:PF12577 OrthoDB:EOG41ZF9W EMBL:U09138 EMBL:U01664 EMBL:U01841
EMBL:U10374 IPI:IPI00125193 IPI:IPI00266075 PIR:A54101
RefSeq:NP_001120802.1 RefSeq:NP_035276.2 UniGene:Mm.3020
ProteinModelPortal:P37238 SMR:P37238 IntAct:P37238 STRING:P37238
PhosphoSite:P37238 PRIDE:P37238 Ensembl:ENSMUST00000171644
GeneID:19016 KEGG:mmu:19016 UCSC:uc012eqj.1 InParanoid:P37238
BindingDB:P37238 ChEMBL:CHEMBL2459 NextBio:295444 Bgee:P37238
CleanEx:MM_PPARG Genevestigator:P37238
GermOnline:ENSMUSG00000000440 Uniprot:P37238
Length = 505
Score = 110 (43.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 401 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 460
Query: 140 GRLLLMTSQCRNIPSARVQ--HIFFAKTVANTSMEKLLCDMYKN 181
++L + R I + VQ H+ KT + S+ LL ++YK+
Sbjct: 461 AKVLQKMTDLRQIVTEHVQLLHVI-KKTETDMSLHPLLQEIYKD 503
Score = 48 (22.0 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P F L DQV
Sbjct: 326 EYAKNIPGFINLDLNDQV 343
>RGD|3371 [details] [associations]
symbol:Pparg "peroxisome proliferator-activated receptor gamma"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001012 "RNA polymerase II regulatory region DNA binding"
evidence=IEA;ISO] [GO:0001818 "negative regulation of cytokine
production" evidence=ISO] [GO:0001890 "placenta development"
evidence=IEA;ISO] [GO:0002674 "negative regulation of acute
inflammatory response" evidence=IMP] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=IEA;ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005829
"cytosol" evidence=ISO;IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEP] [GO:0006631 "fatty
acid metabolic process" evidence=TAS] [GO:0006917 "induction of
apoptosis" evidence=IEA;ISO] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process"
evidence=IEA;ISO] [GO:0007165 "signal transduction" evidence=ISO]
[GO:0007507 "heart development" evidence=IEP] [GO:0008144 "drug
binding" evidence=IEA;ISO] [GO:0008217 "regulation of blood pressure"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO;IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0010033 "response to organic substance" evidence=IEP] [GO:0010745
"negative regulation of macrophage derived foam cell differentiation"
evidence=ISO] [GO:0010871 "negative regulation of receptor
biosynthetic process" evidence=IEA;ISO] [GO:0010887 "negative
regulation of cholesterol storage" evidence=IEA;ISO] [GO:0010891
"negative regulation of sequestering of triglyceride"
evidence=IEA;ISO] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0015909 "long-chain fatty acid transport"
evidence=IEA;ISO] [GO:0019216 "regulation of lipid metabolic process"
evidence=IMP] [GO:0019395 "fatty acid oxidation" evidence=IMP]
[GO:0019899 "enzyme binding" evidence=IEA;ISO] [GO:0030224 "monocyte
differentiation" evidence=IEA;ISO] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=ISO;ISS]
[GO:0030855 "epithelial cell differentiation" evidence=IEA;ISO]
[GO:0031000 "response to caffeine" evidence=IEP] [GO:0031100 "organ
regeneration" evidence=IEP] [GO:0032526 "response to retinoic acid"
evidence=ISO;ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=IEA;ISO] [GO:0033189 "response to vitamin A" evidence=IEP]
[GO:0033613 "activating transcription factor binding"
evidence=IEA;ISO] [GO:0033993 "response to lipid" evidence=ISO]
[GO:0035357 "peroxisome proliferator activated receptor signaling
pathway" evidence=IEA;ISO] [GO:0042493 "response to drug"
evidence=IEP] [GO:0042593 "glucose homeostasis" evidence=IEA;ISO]
[GO:0042953 "lipoprotein transport" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0043627
"response to estrogen stimulus" evidence=IEP] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO;IDA]
[GO:0045165 "cell fate commitment" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=ISO] [GO:0045598 "regulation of fat
cell differentiation" evidence=ISO;IDA] [GO:0045600 "positive
regulation of fat cell differentiation" evidence=ISO;ISS] [GO:0045713
"low-density lipoprotein particle receptor biosynthetic process"
evidence=IEA;ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IDA] [GO:0046321 "positive regulation of fatty acid
oxidation" evidence=IMP] [GO:0046965 "retinoid X receptor binding"
evidence=IEA;ISO] [GO:0048469 "cell maturation" evidence=IEA;ISO]
[GO:0048662 "negative regulation of smooth muscle cell proliferation"
evidence=IEA;ISO] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IMP] [GO:0050544 "arachidonic acid binding"
evidence=ISO] [GO:0050872 "white fat cell differentiation"
evidence=ISO;ISS] [GO:0050873 "brown fat cell differentiation"
evidence=IEA;ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0051974 "negative regulation of telomerase
activity" evidence=IMP] [GO:0055098 "response to low-density
lipoprotein particle stimulus" evidence=IEA;ISO] [GO:0060336
"negative regulation of interferon-gamma-mediated signaling pathway"
evidence=IEA;ISO] [GO:0071285 "cellular response to lithium ion"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003077
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3371
GO:GO:0005829 GO:GO:0005634 GO:GO:0008285 GO:GO:0007507 GO:GO:0051091
GO:GO:0006917 GO:GO:0030308 GO:GO:0032869 GO:GO:0042493 GO:GO:0046872
GO:GO:0008144 GO:GO:0031100 GO:GO:0009409 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0050873 GO:GO:0002674
GO:GO:0031000 GO:GO:0050872 GO:GO:0003700 GO:GO:0045600 GO:GO:0003682
GO:GO:0019395 GO:GO:0042593 GO:GO:0046321 GO:GO:0010887 GO:GO:0055098
GO:GO:0042953 GO:GO:0000122 GO:GO:0010891 GO:GO:0044212 GO:GO:0006919
GO:GO:0032526 GO:GO:0008217 GO:GO:0048714 GO:GO:0043627 GO:GO:0001890
GO:GO:0001012 GO:GO:0033189 GO:GO:0045165 GO:GO:0030374 GO:GO:0030855
GO:GO:0048469 GO:GO:0030224 GO:GO:0071285 GO:GO:0015909
eggNOG:NOG266867 GeneTree:ENSGT00700000104361 GO:GO:0060336
GO:GO:0051974 GO:GO:0010871 HOGENOM:HOG000261626 HOVERGEN:HBG106004
CTD:5468 KO:K08530 OMA:KTTDKSP GO:GO:0045713 InterPro:IPR022590
Pfam:PF12577 EMBL:AF156666 EMBL:AF156665 EMBL:AB019561 EMBL:Y12882
EMBL:AB011365 EMBL:AF246457 EMBL:AF246458 IPI:IPI00207539
IPI:IPI00231890 RefSeq:NP_001138838.1 RefSeq:NP_001138839.1
RefSeq:NP_037256.1 UniGene:Rn.23443 ProteinModelPortal:O88275
SMR:O88275 STRING:O88275 PhosphoSite:O88275
Ensembl:ENSRNOT00000012137 Ensembl:ENSRNOT00000051858 GeneID:25664
KEGG:rno:25664 UCSC:RGD:3371 InParanoid:O88275 BindingDB:O88275
ChEMBL:CHEMBL4797 NextBio:607577 Genevestigator:O88275
GermOnline:ENSRNOG00000008839 Uniprot:O88275
Length = 505
Score = 110 (43.8 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 27/104 (25%), Positives = 52/104 (50%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 401 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 460
Query: 140 GRLLLMTSQCRNIPSARVQ--HIFFAKTVANTSMEKLLCDMYKN 181
++L + R I + VQ H+ KT + S+ LL ++YK+
Sbjct: 461 AKVLQKMTDLRQIVTEHVQLLHVI-KKTETDMSLHPLLQEIYKD 503
Score = 48 (22.0 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P F L DQV
Sbjct: 326 EYAKNIPGFINLDLNDQV 343
>UNIPROTKB|E9PFV2 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003077 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 InterPro:IPR022590 Pfam:PF12577 EMBL:AC090947
EMBL:AC091492 EMBL:AC093174 HGNC:HGNC:9236 ChiTaRS:PPARG
IPI:IPI00791321 ProteinModelPortal:E9PFV2 SMR:E9PFV2 PRIDE:E9PFV2
Ensembl:ENST00000397026 ArrayExpress:E9PFV2 Bgee:E9PFV2
Uniprot:E9PFV2
Length = 483
Score = 111 (44.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 379 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 438
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 439 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 481
Score = 44 (20.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++P F L DQV
Sbjct: 304 EYAKSIPGFVNLDLNDQV 321
>UNIPROTKB|F1NHW8 [details] [associations]
symbol:PPARD "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008366 "axon ensheathment"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0015908
"fatty acid transport" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031589 "cell-substrate
adhesion" evidence=IEA] [GO:0042060 "wound healing" evidence=IEA]
[GO:0042640 "anagen" evidence=IEA] [GO:0043616 "keratinocyte
proliferation" evidence=IEA] [GO:0045598 "regulation of fat cell
differentiation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0051546 "keratinocyte migration" evidence=IEA] [GO:0060612
"adipose tissue development" evidence=IEA] [GO:0070539 "linoleic
acid binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003075
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01290
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0006915 GO:GO:0045893 GO:GO:0043616
GO:GO:0030154 GO:GO:0046872 GO:GO:0008144 GO:GO:0008284
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0014068
GO:GO:0015908 GO:GO:0006635 GO:GO:0000122 GO:GO:0042060
GO:GO:0045598 GO:GO:0050680 GO:GO:0031589
GeneTree:ENSGT00700000104361 GO:GO:0070539 GO:GO:0051546
OMA:SSLFLND EMBL:AC140943 IPI:IPI00588578
Ensembl:ENSGALT00000004076 Uniprot:F1NHW8
Length = 443
Score = 109 (43.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ + A ++ + GL + QVE +QD L H++++HP F
Sbjct: 339 KFNALELDDSDLSLFVAAIILCGDRPGLMNVKQVEEIQDNILRALEFHLQSNHPDAQYLF 398
Query: 140 GRLLLMTSQCRNIPSARVQHIF-FAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + KT TS+ LL ++YK+
Sbjct: 399 PKLLQKMADLRQLVTEHAQLVQKIKKTETETSLHPLLQEIYKD 441
Score = 46 (21.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++PSF L DQV
Sbjct: 264 EFAKSIPSFIGLYLNDQV 281
>UNIPROTKB|Q4U3Q4 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:9615 "Canis lupus familiaris" [GO:0050872 "white fat
cell differentiation" evidence=ISS] [GO:0045600 "positive
regulation of fat cell differentiation" evidence=ISS] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0032526 "response to
retinoic acid" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0071285 "cellular response to lithium ion" evidence=IEA]
[GO:0060336 "negative regulation of interferon-gamma-mediated
signaling pathway" evidence=IEA] [GO:0055098 "response to
low-density lipoprotein particle stimulus" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0050873 "brown fat
cell differentiation" evidence=IEA] [GO:0048662 "negative
regulation of smooth muscle cell proliferation" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0046965 "retinoid X
receptor binding" evidence=IEA] [GO:0045713 "low-density
lipoprotein particle receptor biosynthetic process" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0042953
"lipoprotein transport" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0035357 "peroxisome proliferator
activated receptor signaling pathway" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0030855
"epithelial cell differentiation" evidence=IEA] [GO:0030224
"monocyte differentiation" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0015909 "long-chain fatty acid
transport" evidence=IEA] [GO:0010891 "negative regulation of
sequestering of triglyceride" evidence=IEA] [GO:0010887 "negative
regulation of cholesterol storage" evidence=IEA] [GO:0010871
"negative regulation of receptor biosynthetic process"
evidence=IEA] [GO:0008217 "regulation of blood pressure"
evidence=IEA] [GO:0008144 "drug binding" evidence=IEA] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=IEA] [GO:0006917 "induction of
apoptosis" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0001012 "RNA polymerase II
regulatory region DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003077 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005829
GO:GO:0005634 GO:GO:0008285 GO:GO:0051091 GO:GO:0006917
GO:GO:0032869 GO:GO:0046872 GO:GO:0003677 GO:GO:0008144
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0050873 GO:GO:0050872 GO:GO:0045600 GO:GO:0003682
GO:GO:0042593 GO:GO:0010887 GO:GO:0055098 GO:GO:0042953
GO:GO:0000122 GO:GO:0010891 GO:GO:0006919 GO:GO:0032526
GO:GO:0008217 GO:GO:0001890 GO:GO:0001012 GO:GO:0045165
GO:GO:0030374 GO:GO:0030855 GO:GO:0048469 GO:GO:0030224
GO:GO:0071285 GO:GO:0015909 eggNOG:NOG266867 GO:GO:0060336
GO:GO:0010871 HOGENOM:HOG000261626 HOVERGEN:HBG106004 CTD:5468
KO:K08530 GO:GO:0045713 InterPro:IPR022590 Pfam:PF12577
EMBL:DQ016141 RefSeq:NP_001019803.1 UniGene:Cfa.3467
ProteinModelPortal:Q4U3Q4 SMR:Q4U3Q4 STRING:Q4U3Q4 GeneID:403606
KEGG:cfa:403606 OrthoDB:EOG41ZF9W BindingDB:Q4U3Q4
ChEMBL:CHEMBL1932903 NextBio:20817111 Uniprot:Q4U3Q4
Length = 505
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 401 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 460
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 461 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 503
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++P F L DQV
Sbjct: 326 EYAKSIPGFVNLDLNDQV 343
>UNIPROTKB|P37231 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001012 "RNA polymerase II regulatory region DNA
binding" evidence=IEA] [GO:0002674 "negative regulation of acute
inflammatory response" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0007507 "heart development"
evidence=IEA] [GO:0009409 "response to cold" evidence=IEA]
[GO:0019395 "fatty acid oxidation" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0031000
"response to caffeine" evidence=IEA] [GO:0031100 "organ
regeneration" evidence=IEA] [GO:0033189 "response to vitamin A"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0043627 "response to estrogen stimulus" evidence=IEA]
[GO:0046321 "positive regulation of fatty acid oxidation"
evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0051974 "negative regulation of
telomerase activity" evidence=IEA] [GO:0071285 "cellular response
to lithium ion" evidence=IEA] [GO:0050872 "white fat cell
differentiation" evidence=ISS;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0032526 "response to retinoic acid" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0030374 "ligand-dependent nuclear
receptor transcription coactivator activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0007584 "response
to nutrient" evidence=TAS] [GO:0006629 "lipid metabolic process"
evidence=TAS] [GO:0045600 "positive regulation of fat cell
differentiation" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0010745 "negative regulation of macrophage
derived foam cell differentiation" evidence=IC;IDA] [GO:0010887
"negative regulation of cholesterol storage" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS;IDA] [GO:0010871 "negative
regulation of receptor biosynthetic process" evidence=IDA]
[GO:0010891 "negative regulation of sequestering of triglyceride"
evidence=IDA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0008144 "drug binding" evidence=IDA] [GO:0008217
"regulation of blood pressure" evidence=IMP] [GO:0032869 "cellular
response to insulin stimulus" evidence=IMP] [GO:0033613 "activating
transcription factor binding" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=IMP] [GO:0055088 "lipid homeostasis"
evidence=TAS] [GO:0001890 "placenta development" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;IDA] [GO:0004955 "prostaglandin receptor
activity" evidence=TAS] [GO:0030224 "monocyte differentiation"
evidence=IDA] [GO:0046965 "retinoid X receptor binding"
evidence=IDA] [GO:0033993 "response to lipid" evidence=ISS]
[GO:0050544 "arachidonic acid binding" evidence=ISS] [GO:0005829
"cytosol" evidence=ISS] [GO:0015909 "long-chain fatty acid
transport" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0030855 "epithelial cell differentiation" evidence=ISS]
[GO:0045165 "cell fate commitment" evidence=ISS] [GO:0007165
"signal transduction" evidence=IDA] [GO:0042953 "lipoprotein
transport" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045713 "low-density lipoprotein
particle receptor biosynthetic process" evidence=IDA] [GO:0055098
"response to low-density lipoprotein particle stimulus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0048469 "cell
maturation" evidence=IDA] [GO:0045087 "innate immune response"
evidence=TAS] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IDA]
[GO:0006917 "induction of apoptosis" evidence=IDA] [GO:0060336
"negative regulation of interferon-gamma-mediated signaling
pathway" evidence=IMP] [GO:0048662 "negative regulation of smooth
muscle cell proliferation" evidence=IDA] [GO:0035357 "peroxisome
proliferator activated receptor signaling pathway" evidence=IMP]
[GO:0060694 "regulation of cholesterol transporter activity"
evidence=IC] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003077 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005829 Reactome:REACT_111045
GO:GO:0005654 GO:GO:0007507 GO:GO:0051091 GO:GO:0006917
GO:GO:0030308 GO:GO:0032869 GO:GO:0042493 EMBL:CH471055
GO:GO:0046872 Pathway_Interaction_DB:nfat_tfpathway GO:GO:0008144
GO:GO:0031100 GO:GO:0009409 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0050873 GO:GO:0007584
GO:GO:0006629 GO:GO:0045087 GO:GO:0002674 GO:GO:0031000
GO:GO:0050872 GO:GO:0045600 GO:GO:0003682 GO:GO:0019395
GO:GO:0042593 GO:GO:0046321 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0010887 GO:GO:0010745 GO:GO:0055098 GO:GO:0042953
GO:GO:0000122 GO:GO:0010891 GO:GO:0044212 GO:GO:0055088
GO:GO:0006919 GO:GO:0032526 GO:GO:0008217 DrugBank:DB00159
DrugBank:DB00197 GO:GO:0048714 GO:GO:0043627 GO:GO:0001890
GO:GO:0001012 GO:GO:0048662 MIM:601665 GO:GO:0033189 GO:GO:0050544
GO:GO:0006367 DrugBank:DB01076 GO:GO:0045165 GO:GO:0030374
GO:GO:0030855 GO:GO:0048469 GO:GO:0046965 GO:GO:0030224
GO:GO:0071285 GO:GO:0015909 eggNOG:NOG266867 DrugBank:DB01132
DrugBank:DB00412 MIM:137800 GO:GO:0060336 Orphanet:360
GO:GO:0033613 GO:GO:0035357 GO:GO:0051974 PDB:1FM6 PDB:1FM9
PDB:1K74 PDB:1RDT PDB:2FVJ PDB:2GTK PDB:2HFP PDB:2PRG PDB:3CWD
PDB:3ET3 PDB:3FEJ PDB:3FUR PDB:3G9E PDB:3H0A PDB:3LMP PDB:3QT0
PDB:3S9S PDB:3T03 PDB:3V9Y PDB:3VN2 PDB:4F9M PDBsum:1FM6
PDBsum:1FM9 PDBsum:1K74 PDBsum:1RDT PDBsum:2FVJ PDBsum:2GTK
PDBsum:2HFP PDBsum:2PRG PDBsum:3CWD PDBsum:3ET3 PDBsum:3FEJ
PDBsum:3FUR PDBsum:3G9E PDBsum:3H0A PDBsum:3LMP PDBsum:3QT0
PDBsum:3S9S PDBsum:3T03 PDBsum:3V9Y PDBsum:3VN2 PDBsum:4F9M
PDB:3DZU PDB:3DZY PDB:3E00 PDBsum:3DZU PDBsum:3DZY PDBsum:3E00
PDB:1WM0 PDBsum:1WM0 PDB:1ZGY PDBsum:1ZGY GO:GO:0010871
HOVERGEN:HBG106004 CTD:5468 KO:K08530 OMA:KTTDKSP GO:GO:0045713
InterPro:IPR022590 Pfam:PF12577 EMBL:U79012 EMBL:U63415 EMBL:D83233
EMBL:L40904 EMBL:AB005526 EMBL:X90563 EMBL:DQ356894 EMBL:BT007281
EMBL:AK290581 EMBL:AB451337 EMBL:AB451486 EMBL:AY157024
EMBL:AC090947 EMBL:AC091492 EMBL:AC093174 EMBL:BC006811
IPI:IPI00020897 IPI:IPI00853091 IPI:IPI00926009 PIR:JC4859
PIR:PC4290 PIR:PC4429 RefSeq:NP_005028.4 RefSeq:NP_056953.2
RefSeq:NP_619725.2 RefSeq:NP_619726.2 UniGene:Hs.162646 PDB:1I7I
PDB:1KNU PDB:1NYX PDB:1PRG PDB:1ZEO PDB:2ATH PDB:2F4B PDB:2G0G
PDB:2G0H PDB:2HWQ PDB:2HWR PDB:2I4J PDB:2I4P PDB:2I4Z PDB:2OM9
PDB:2P4Y PDB:2POB PDB:2Q59 PDB:2Q5P PDB:2Q5S PDB:2Q61 PDB:2Q6R
PDB:2Q6S PDB:2Q8S PDB:2QMV PDB:2VSR PDB:2VST PDB:2VV0 PDB:2VV1
PDB:2VV2 PDB:2VV3 PDB:2VV4 PDB:2XKW PDB:2YFE PDB:2ZK0 PDB:2ZK1
PDB:2ZK2 PDB:2ZK3 PDB:2ZK4 PDB:2ZK5 PDB:2ZK6 PDB:2ZNO PDB:2ZVT
PDB:3ADS PDB:3ADT PDB:3ADU PDB:3ADV PDB:3ADW PDB:3ADX PDB:3AN3
PDB:3AN4 PDB:3B0Q PDB:3B0R PDB:3B1M PDB:3B3K PDB:3BC5 PDB:3CDP
PDB:3CDS PDB:3CS8 PDB:3D6D PDB:3ET0 PDB:3GBK PDB:3HO0 PDB:3HOD
PDB:3IA6 PDB:3K8S PDB:3KMG PDB:3NOA PDB:3OSI PDB:3OSW PDB:3PBA
PDB:3PO9 PDB:3PRG PDB:3R5N PDB:3R8A PDB:3R8I PDB:3SZ1 PDB:3TY0
PDB:3U9Q PDB:3V9T PDB:3V9V PDB:3VJH PDB:3VJI PDB:4A4V PDB:4A4W
PDB:4PRG PDBsum:1I7I PDBsum:1KNU PDBsum:1NYX PDBsum:1PRG
PDBsum:1ZEO PDBsum:2ATH PDBsum:2F4B PDBsum:2G0G PDBsum:2G0H
PDBsum:2HWQ PDBsum:2HWR PDBsum:2I4J PDBsum:2I4P PDBsum:2I4Z
PDBsum:2OM9 PDBsum:2P4Y PDBsum:2POB PDBsum:2Q59 PDBsum:2Q5P
PDBsum:2Q5S PDBsum:2Q61 PDBsum:2Q6R PDBsum:2Q6S PDBsum:2Q8S
PDBsum:2QMV PDBsum:2VSR PDBsum:2VST PDBsum:2VV0 PDBsum:2VV1
PDBsum:2VV2 PDBsum:2VV3 PDBsum:2VV4 PDBsum:2XKW PDBsum:2YFE
PDBsum:2ZK0 PDBsum:2ZK1 PDBsum:2ZK2 PDBsum:2ZK3 PDBsum:2ZK4
PDBsum:2ZK5 PDBsum:2ZK6 PDBsum:2ZNO PDBsum:2ZVT PDBsum:3ADS
PDBsum:3ADT PDBsum:3ADU PDBsum:3ADV PDBsum:3ADW PDBsum:3ADX
PDBsum:3AN3 PDBsum:3AN4 PDBsum:3B0Q PDBsum:3B0R PDBsum:3B1M
PDBsum:3B3K PDBsum:3BC5 PDBsum:3CDP PDBsum:3CDS PDBsum:3CS8
PDBsum:3D6D PDBsum:3ET0 PDBsum:3GBK PDBsum:3HO0 PDBsum:3HOD
PDBsum:3IA6 PDBsum:3K8S PDBsum:3KMG PDBsum:3NOA PDBsum:3OSI
PDBsum:3OSW PDBsum:3PBA PDBsum:3PO9 PDBsum:3PRG PDBsum:3R5N
PDBsum:3R8A PDBsum:3R8I PDBsum:3SZ1 PDBsum:3TY0 PDBsum:3U9Q
PDBsum:3V9T PDBsum:3V9V PDBsum:3VJH PDBsum:3VJI PDBsum:4A4V
PDBsum:4A4W PDBsum:4PRG ProteinModelPortal:P37231 SMR:P37231
DIP:DIP-35528N IntAct:P37231 MINT:MINT-5209723 STRING:P37231
PhosphoSite:P37231 DMDM:13432234 PRIDE:P37231 DNASU:5468
Ensembl:ENST00000287820 Ensembl:ENST00000309576
Ensembl:ENST00000396999 Ensembl:ENST00000397010
Ensembl:ENST00000397012 Ensembl:ENST00000397015 GeneID:5468
KEGG:hsa:5468 UCSC:uc003bwr.3 GeneCards:GC03P012328 HGNC:HGNC:9236
HPA:CAB004282 MIM:601487 MIM:604367 MIM:606641 MIM:609338
neXtProt:NX_P37231 Orphanet:79083 PharmGKB:PA281 InParanoid:P37231
PhylomeDB:P37231 BindingDB:P37231 ChEMBL:CHEMBL235 ChiTaRS:PPARG
EvolutionaryTrace:P37231 GenomeRNAi:5468 NextBio:21164
ArrayExpress:P37231 Bgee:P37231 Genevestigator:P37231
GermOnline:ENSG00000132170 GO:GO:0004955 GO:GO:0060694
Uniprot:P37231
Length = 505
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 401 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 460
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 461 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 503
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++P F L DQV
Sbjct: 326 EYAKSIPGFVNLDLNDQV 343
>UNIPROTKB|O18924 [details] [associations]
symbol:PPARG "Peroxisome proliferator-activated receptor
gamma" species:9544 "Macaca mulatta" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISS] [GO:0032526
"response to retinoic acid" evidence=ISS] [GO:0045600 "positive
regulation of fat cell differentiation" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0050872 "white fat cell
differentiation" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003077 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005829 GO:GO:0005634
GO:GO:0008285 GO:GO:0051091 GO:GO:0006917 GO:GO:0032869
GO:GO:0046872 GO:GO:0003677 GO:GO:0008144 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0050873
GO:GO:0050872 GO:GO:0045600 GO:GO:0003682 GO:GO:0042593
GO:GO:0010887 GO:GO:0055098 GO:GO:0042953 GO:GO:0000122
GO:GO:0010891 GO:GO:0006919 GO:GO:0032526 GO:GO:0008217
GO:GO:0001890 GO:GO:0001012 GO:GO:0045165 GO:GO:0030374
GO:GO:0030855 GO:GO:0048469 GO:GO:0030224 GO:GO:0071285
GO:GO:0015909 eggNOG:NOG266867 GO:GO:0060336 GO:GO:0010871
HOGENOM:HOG000261626 HOVERGEN:HBG106004 CTD:5468 KO:K08530
GO:GO:0045713 InterPro:IPR022590 Pfam:PF12577 OrthoDB:EOG41ZF9W
EMBL:AF033103 EMBL:AF033343 EMBL:AF033342 RefSeq:NP_001028032.1
UniGene:Mmu.3422 ProteinModelPortal:O18924 SMR:O18924
MINT:MINT-138526 STRING:O18924 GeneID:574190 KEGG:mcc:574190
InParanoid:O18924 NextBio:19981584 Uniprot:O18924
Length = 505
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 401 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 460
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 461 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 503
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++P F L DQV
Sbjct: 326 EYAKSIPGFVNLDLNDQV 343
>UNIPROTKB|Q95KZ8 [details] [associations]
symbol:PPARgamma2 "Peroxisome proliferator-activated
receptor gamma 2" species:9541 "Macaca fascicularis" [GO:0045600
"positive regulation of fat cell differentiation" evidence=ISS]
[GO:0050872 "white fat cell differentiation" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003077 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01291 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0050872 GO:GO:0045600 GO:GO:0030522 HOVERGEN:HBG106004
InterPro:IPR022590 Pfam:PF12577 EMBL:AY048695 HSSP:Q96J12
ProteinModelPortal:Q95KZ8 SMR:Q95KZ8 Uniprot:Q95KZ8
Length = 505
Score = 111 (44.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A AV++ + GL + +E++QD L ++ +HP F
Sbjct: 401 KFNALELDDSDLAIFIAVIILSGDRPGLLNVKPIEDIQDNLLQALELQLKLNHPESSQLF 460
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R I + VQ + KT + S+ LL ++YK+
Sbjct: 461 AKLLQKMTDLRQIVTEHVQLLQVIKKTETDMSLHPLLQEIYKD 503
Score = 44 (20.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++P F L DQV
Sbjct: 326 EYAKSIPGFVNLDLNDQV 343
>RGD|3370 [details] [associations]
symbol:Ppard "peroxisome proliferator-activated receptor delta"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001890 "placenta development" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;TAS] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO;TAS] [GO:0005504 "fatty
acid binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006029 "proteoglycan metabolic process" evidence=IDA]
[GO:0006629 "lipid metabolic process" evidence=ISO;IDA] [GO:0006776
"vitamin A metabolic process" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0007507 "heart development" evidence=IEP]
[GO:0007566 "embryo implantation" evidence=IEP] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0008284 "positive regulation of cell proliferation" evidence=ISO]
[GO:0008289 "lipid binding" evidence=ISO] [GO:0008366 "axon
ensheathment" evidence=ISO] [GO:0008654 "phospholipid biosynthetic
process" evidence=IDA] [GO:0009299 "mRNA transcription" evidence=IDA]
[GO:0009749 "response to glucose stimulus" evidence=IEP] [GO:0010033
"response to organic substance" evidence=IEP] [GO:0014068 "positive
regulation of phosphatidylinositol 3-kinase cascade" evidence=ISO]
[GO:0014823 "response to activity" evidence=IEP] [GO:0014912
"negative regulation of smooth muscle cell migration" evidence=IDA]
[GO:0019395 "fatty acid oxidation" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030308 "negative regulation of
cell growth" evidence=IDA] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=ISO] [GO:0031589 "cell-substrate
adhesion" evidence=ISO] [GO:0032024 "positive regulation of insulin
secretion" evidence=IDA] [GO:0032966 "negative regulation of collagen
biosynthetic process" evidence=IMP] [GO:0033189 "response to vitamin
A" evidence=IEP] [GO:0042060 "wound healing" evidence=ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0042640 "anagen" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=IDA] [GO:0043616 "keratinocyte
proliferation" evidence=ISO] [GO:0045598 "regulation of fat cell
differentiation" evidence=ISO] [GO:0045684 "positive regulation of
epidermis development" evidence=IDA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045909 "positive
regulation of vasodilation" evidence=IDA] [GO:0046697
"decidualization" evidence=IEP] [GO:0048662 "negative regulation of
smooth muscle cell proliferation" evidence=IDA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=ISO]
[GO:0050728 "negative regulation of inflammatory response"
evidence=IDA] [GO:0051059 "NF-kappaB binding" evidence=IPI]
[GO:0051546 "keratinocyte migration" evidence=ISO] [GO:0060612
"adipose tissue development" evidence=ISO] [GO:0070539 "linoleic acid
binding" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003075
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01290
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3370
GO:GO:0005634 GO:GO:0043066 GO:GO:0007507 GO:GO:0030308 GO:GO:0014823
GO:GO:0046872 GO:GO:0050728 GO:GO:0009749 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0032966 GO:GO:0045909 GO:GO:0032024
GO:GO:0019395 GO:GO:0008654 GO:GO:0003713 GO:GO:0005504 GO:GO:0014912
GO:GO:0048662 GO:GO:0033189 GO:GO:0006776 GO:GO:0006029 GO:GO:0046697
GO:GO:0007566 GO:GO:0009299 HOVERGEN:HBG106004 IPI:IPI00325169
UniGene:Rn.96181 HSSP:Q03181 EMBL:U75918 ProteinModelPortal:Q9QWI0
SMR:Q9QWI0 STRING:Q9QWI0 UCSC:RGD:3370 InParanoid:Q9QWI0
Genevestigator:Q9QWI0 GO:GO:0045684 Uniprot:Q9QWI0
Length = 440
Score = 106 (42.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A A ++ + GL + QVE +QD L H++ +HP F
Sbjct: 336 KFNALELDDSDLALFIAAIILCGDRPGLMNVPQVEAIQDTILQALEFHLQVNHPDSQYLF 395
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + + KT + T + LL ++YK+
Sbjct: 396 PKLLQKMADLRQLVTEHAQMMQWLKKTESETLLHPLLQEIYKD 438
Score = 50 (22.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P+F++L DQV
Sbjct: 261 EFAKNIPNFSSLFLNDQV 278
>UNIPROTKB|Q99ND3 [details] [associations]
symbol:Ppard "Protein Ppard" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001890 "placenta
development" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008366 "axon ensheathment" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0015908 "fatty acid transport"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031589 "cell-substrate adhesion" evidence=IEA] [GO:0042060
"wound healing" evidence=IEA] [GO:0042640 "anagen" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0045598
"regulation of fat cell differentiation" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051546 "keratinocyte migration" evidence=IEA]
[GO:0060612 "adipose tissue development" evidence=IEA] [GO:0070539
"linoleic acid binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003075 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01290 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3370 GO:GO:0005634 GO:GO:0006915
GO:GO:0045893 GO:GO:0043616 GO:GO:0030154 GO:GO:0046872
GO:GO:0008144 GO:GO:0008284 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0014068 GO:GO:0060612 GO:GO:0015908
GO:GO:0006635 GO:GO:0000122 GO:GO:0001890 GO:GO:0042060
GO:GO:0042640 GO:GO:0045598 GO:GO:0050680 GO:GO:0031589
EMBL:CH473988 GO:GO:0008366 GeneTree:ENSGT00700000104361
GO:GO:0070539 GO:GO:0051546 HOVERGEN:HBG106004 CTD:5467 KO:K04504
OMA:SSLFLND EMBL:AJ306400 IPI:IPI00325169 RefSeq:NP_037273.2
UniGene:Rn.96181 HSSP:Q03181 SMR:Q99ND3 STRING:Q99ND3
Ensembl:ENSRNOT00000042539 GeneID:25682 KEGG:rno:25682
InParanoid:Q99ND3 NextBio:607651 Genevestigator:Q99ND3
Uniprot:Q99ND3
Length = 440
Score = 106 (42.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A A ++ + GL + QVE +QD L H++ +HP F
Sbjct: 336 KFNALELDDSDLALFIAAIILCGDRPGLMNVPQVEAIQDTILQALEFHLQVNHPDSQYLF 395
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + + KT + T + LL ++YK+
Sbjct: 396 PKLLQKMADLRQLVTEHAQMMQWLKKTESETLLHPLLQEIYKD 438
Score = 50 (22.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P+F++L DQV
Sbjct: 261 EFAKNIPNFSSLFLNDQV 278
>UNIPROTKB|Q9YHZ7 [details] [associations]
symbol:esr1 "Estrogen receptor" species:7998 "Ictalurus
punctatus" [GO:0030284 "estrogen receptor activity" evidence=IDA]
[GO:0042562 "hormone binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042562
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 GO:GO:0030284
EMBL:AF253505 EMBL:AF061275 EMBL:AF253506 RefSeq:NP_001187003.1
UniGene:Ipu.11209 ProteinModelPortal:Q9YHZ7 SMR:Q9YHZ7
GeneID:100304474 CTD:246870 Uniprot:Q9YHZ7
Length = 617
Score = 119 (46.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 44/188 (23%), Positives = 75/188 (39%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQWSLPLLESSPLFNASEHVAAVPNG 62
+ WAK +P F L DQV I W + L A + + G
Sbjct: 363 IAWAKKVPGFQDLSLHDQVQLLESSWLEILMIGLI-WR-SIYTPGKLIFAQDLILDKSEG 420
Query: 63 KASQTAADV-RVLNGVLQRFRLVGVDPAEFACLKAVVLFKS--------ETRGLKDSLQV 113
+ + A++ +L + RFR + + EF CLKA++L S L+D V
Sbjct: 421 ECVEGMAEIFDMLLATVARFRTLKLKSEEFVCLKAIILLNSGAFSFCSSPVEPLRDGFMV 480
Query: 114 ENLQDQAQVMLAQHVRTHHPA---QPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTS 170
+ + D L ++ + Q R +LLL+ S R++ ++H++ K
Sbjct: 481 QCMMDNITDALIYYISQSGISVQLQSRRQAQLLLLLSHIRHMSYKGMEHLYSMKCKNKVP 540
Query: 171 MEKLLCDM 178
+ LL +M
Sbjct: 541 LYDLLLEM 548
>MGI|MGI:101884 [details] [associations]
symbol:Ppard "peroxisome proliferator activator receptor
delta" species:10090 "Mus musculus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001890 "placenta development" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO;TAS] [GO:0005504 "fatty acid binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006029 "proteoglycan
metabolic process" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006629 "lipid
metabolic process" evidence=ISO;IMP] [GO:0006776 "vitamin A
metabolic process" evidence=ISO] [GO:0006915 "apoptotic process"
evidence=ISO] [GO:0007566 "embryo implantation" evidence=TAS]
[GO:0008047 "enzyme activator activity" evidence=TAS] [GO:0008144
"drug binding" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IMP] [GO:0008289 "lipid binding" evidence=ISO] [GO:0008366
"axon ensheathment" evidence=IMP] [GO:0008544 "epidermis
development" evidence=TAS] [GO:0008654 "phospholipid biosynthetic
process" evidence=ISO] [GO:0009299 "mRNA transcription"
evidence=ISO] [GO:0009987 "cellular process" evidence=TAS]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IDA] [GO:0014912 "negative regulation of smooth
muscle cell migration" evidence=ISO] [GO:0016501 "prostacyclin
receptor activity" evidence=TAS] [GO:0019395 "fatty acid oxidation"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IMP;IDA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISO;TAS] [GO:0031589 "cell-substrate adhesion"
evidence=IMP] [GO:0032024 "positive regulation of insulin
secretion" evidence=ISO] [GO:0032966 "negative regulation of
collagen biosynthetic process" evidence=ISO] [GO:0042060 "wound
healing" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IGI] [GO:0042640 "anagen" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043616 "keratinocyte proliferation"
evidence=IMP] [GO:0045598 "regulation of fat cell differentiation"
evidence=IMP] [GO:0045684 "positive regulation of epidermis
development" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045909 "positive
regulation of vasodilation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=TAS] [GO:0046982 "protein heterodimerization activity"
evidence=TAS] [GO:0048662 "negative regulation of smooth muscle
cell proliferation" evidence=ISO] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IGI] [GO:0050728
"negative regulation of inflammatory response" evidence=ISO]
[GO:0050796 "regulation of insulin secretion" evidence=NAS]
[GO:0051059 "NF-kappaB binding" evidence=ISO] [GO:0051546
"keratinocyte migration" evidence=IMP] [GO:0060612 "adipose tissue
development" evidence=IMP] [GO:0070539 "linoleic acid binding"
evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003075
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01290
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
MGI:MGI:101884 GO:GO:0005634 GO:GO:0006915 GO:GO:0045893
GO:GO:0043616 GO:GO:0030154 GO:GO:0046872 GO:GO:0003677
GO:GO:0008144 GO:GO:0008284 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0014068 GO:GO:0060612 GO:GO:0015908
GO:GO:0050796 GO:GO:0006635 GO:GO:0000122 GO:GO:0046982
GO:GO:0001890 GO:GO:0042060 GO:GO:0042640 GO:GO:0008047
GO:GO:0045598 GO:GO:0050680 GO:GO:0031589 GO:GO:0007566
GO:GO:0046965 GO:GO:0008366 eggNOG:NOG266867 GO:GO:0070539
GO:GO:0051546 HOGENOM:HOG000261626 HOVERGEN:HBG106004
OrthoDB:EOG4FFD1Q CTD:5467 KO:K04504 OMA:SSLFLND EMBL:L28116
EMBL:U10375 EMBL:BC070398 EMBL:U01665 IPI:IPI00271799 PIR:I55442
RefSeq:NP_035275.1 UniGene:Mm.328914 ProteinModelPortal:P35396
SMR:P35396 DIP:DIP-29851N IntAct:P35396 STRING:P35396
PhosphoSite:P35396 PRIDE:P35396 Ensembl:ENSMUST00000002320
GeneID:19015 KEGG:mmu:19015 InParanoid:P35396 BindingDB:P35396
ChEMBL:CHEMBL2458 NextBio:295440 Bgee:P35396 CleanEx:MM_PPARD
Genevestigator:P35396 GermOnline:ENSMUSG00000002250 GO:GO:0016501
Uniprot:P35396
Length = 440
Score = 105 (42.0 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 27/103 (26%), Positives = 51/103 (49%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A A ++ + GL + QVE +QD L H++ +HP F
Sbjct: 336 KFNALELDDSDLALFIAAIILCGDRPGLMNVPQVEAIQDTILRALEFHLQVNHPDSQYLF 395
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + + KT + T + LL ++YK+
Sbjct: 396 PKLLQKMADLRQLVTEHAQMMQWLKKTESETLLHPLLQEIYKD 438
Score = 50 (22.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AKN+P+F++L DQV
Sbjct: 261 EFAKNIPNFSSLFLNDQV 278
>ZFIN|ZDB-GENE-040724-202 [details] [associations]
symbol:nr6a1b "nuclear receptor subfamily 6, group
A, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISS] [GO:0048513 "organ
development" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0016477 "cell migration" evidence=ISS]
[GO:0030917 "midbrain-hindbrain boundary development" evidence=ISS]
[GO:0022008 "neurogenesis" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040724-202 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803
GO:GO:0016477 GO:GO:0022008 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0030917
HSSP:P03372 eggNOG:NOG253308 HOGENOM:HOG000113847
HOVERGEN:HBG052664 OrthoDB:EOG4SJ5DP EMBL:AL772368 EMBL:BC097237
EMBL:DQ017610 IPI:IPI00495851 RefSeq:NP_001028892.1
UniGene:Dr.86752 ProteinModelPortal:Q4V8R7 SMR:Q4V8R7 GeneID:497167
KEGG:dre:497167 CTD:497167 NextBio:20865875 Uniprot:Q4V8R7
Length = 455
Score = 117 (46.2 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/153 (22%), Positives = 66/153 (43%)
Query: 3 VKWAKNLPSFAALPFRDQVIXXXXXXXXXXXXNAIQ-WSLPLLESSPLFNASEHVAAVPN 61
+ W K LP F L +D ++I S +L L N + H +
Sbjct: 265 IVWLKRLPFFTDLSIKDCTRLLGSSWHQLILLSSITVHSAQIL--GELANVTHHYTPSSH 322
Query: 62 G--KASQTAADV-RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQD 118
+ + A +V LN + ++F + + E++CLK + L ET GL ++ ++ L +
Sbjct: 323 TLQRFGEDAMEVMESLNFLFRKFHQLNISNEEYSCLKTITLLNQETTGLCNTSMLKQLSE 382
Query: 119 QAQVMLAQHVRTHHPAQPARFGRLLLMTSQCRN 151
+ + + HP +P RF ++ ++ R+
Sbjct: 383 RYWTLCRELTERLHPQRPKRFSDIITCLTEIRH 415
>WB|WBGene00003625 [details] [associations]
symbol:nhr-31 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006970 "response to
osmotic stress" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0009886
"post-embryonic morphogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0009792 GO:GO:0006355
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0006970 EMBL:FO080616
GeneTree:ENSGT00670000097927 EMBL:AF273776 PIR:T34121
RefSeq:NP_001021329.1 RefSeq:NP_001021330.1 RefSeq:NP_741456.1
UniGene:Cel.18366 ProteinModelPortal:Q18192 SMR:Q18192
DIP:DIP-26995N IntAct:Q18192 MINT:MINT-1044174 STRING:Q18192
PaxDb:Q18192 EnsemblMetazoa:C26B2.3a GeneID:177601
KEGG:cel:CELE_C26B2.3 UCSC:C26B2.3a.1 CTD:177601 WormBase:C26B2.3a
WormBase:C26B2.3b WormBase:C26B2.3c eggNOG:NOG281167
InParanoid:Q18192 OMA:ISLREMF NextBio:897532 ArrayExpress:Q18192
Uniprot:Q18192
Length = 583
Score = 117 (46.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 72 RVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQ--VENLQDQAQVMLAQHVR 129
R LN ++ R + + E LKA+++ +GL + + + L+D+ Q ML Q V+
Sbjct: 350 RTLNELVAPLRKLNLKEEEIVPLKAIIILNPNAKGLSEHARHAISELRDKVQDMLFQIVK 409
Query: 130 THHPAQPA--RFGRLLLMTSQCRNIPSARVQHIFFAKTVAN-TSMEKLLCDMY 179
HP A RFG LLL+ + +++ F + + S + LL +M+
Sbjct: 410 ELHPIYSASSRFGNLLLLLPTITTLSGLMSENMHFCQALGGRASGDNLLAEMF 462
>MGI|MGI:1352460 [details] [associations]
symbol:Nr0b1 "nuclear receptor subfamily 0, group B, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IMP] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO;IGI] [GO:0003723 "RNA binding" evidence=ISO;IDA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=ISO] [GO:0006950 "response to stress" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007530 "sex
determination" evidence=IGI] [GO:0008104 "protein localization"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008406 "gonad development" evidence=ISO]
[GO:0008584 "male gonad development" evidence=ISO;IMP] [GO:0016020
"membrane" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IGI] [GO:0030238 "male sex determination"
evidence=IGI;IMP] [GO:0030325 "adrenal gland development"
evidence=ISO;IGI] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=ISO] [GO:0032448 "DNA hairpin binding"
evidence=ISO] [GO:0033144 "negative regulation of intracellular
steroid hormone receptor signaling pathway" evidence=ISO]
[GO:0033327 "Leydig cell differentiation" evidence=IMP] [GO:0035258
"steroid hormone receptor binding" evidence=ISO] [GO:0042788
"polysomal ribosome" evidence=ISO;IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;IDA] [GO:0050682 "AF-2
domain binding" evidence=ISO] [GO:0060008 "Sertoli cell
differentiation" evidence=IMP] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 MGI:MGI:1352460 GO:GO:0005634 GO:GO:0003714
GO:GO:0008104 GO:GO:0006950 GO:GO:0006694 GO:GO:0030325
GO:GO:0033327 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0043434 GO:GO:0007283
GO:GO:0003723 GO:GO:0042788 GO:GO:0000122 GO:GO:0003690
GO:GO:0043433 GO:GO:0033144 GO:GO:0060008 GO:GO:0030238
GO:GO:0045596 HOVERGEN:HBG005453 GO:GO:0032448 InterPro:IPR025900
Pfam:PF14046 CTD:190 eggNOG:NOG238310 HOGENOM:HOG000231151
KO:K08562 OrthoDB:EOG48D0V9 EMBL:S83180 EMBL:S83178 EMBL:U41568
IPI:IPI00117060 PIR:JC5199 RefSeq:NP_031456.1 UniGene:Mm.5180
PDB:3F5C PDBsum:3F5C ProteinModelPortal:Q61066 SMR:Q61066
DIP:DIP-29929N IntAct:Q61066 STRING:Q61066 PhosphoSite:Q61066
PRIDE:Q61066 DNASU:11614 Ensembl:ENSMUST00000026036 GeneID:11614
KEGG:mmu:11614 GeneTree:ENSGT00390000015719 InParanoid:Q61066
EvolutionaryTrace:Q61066 NextBio:279166 Bgee:Q61066
CleanEx:MM_NR0B1 Genevestigator:Q61066
GermOnline:ENSMUSG00000025056 Uniprot:Q61066
Length = 472
Score = 110 (43.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 31/111 (27%), Positives = 50/111 (45%)
Query: 68 AADVRVLNGVLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQH 127
AA V+ + + + +D E+A LK VLF + GL+ +E LQ + Q +L +H
Sbjct: 357 AAAVQAIKSFFFKCWSLNIDTKEYAYLKGTVLFNPDLPGLQCVKYIEGLQWRTQQILTEH 416
Query: 128 VRTHHPAQPARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
+R R L R I S V +FF + SM+ ++ +M
Sbjct: 417 IRMMQREYQIRSAELNSALFLLRFINSDVVTELFFRPIIGAVSMDDMMLEM 467
Score = 39 (18.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 3 VKWAKNLPSFAALPFRDQVI 22
+++ K LP F LP Q++
Sbjct: 268 LRFVKYLPCFQILPLDQQLV 287
>UNIPROTKB|I3L6W7 [details] [associations]
symbol:LOC100624946 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003076 InterPro:IPR008946
Pfam:PF00104 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01289
SMART:SM00430 GO:GO:0005634 GO:GO:0003677 GO:GO:0008144
GO:GO:0004879 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0046321 GO:GO:0010887 GO:GO:0000122 GO:GO:0010891
GO:GO:0042060 GO:GO:0008544 GO:GO:0070166 GO:GO:0032099
GeneTree:ENSGT00700000104361 GO:GO:0072363 GO:GO:0072369
GO:GO:0010871 GO:GO:0072366 Ensembl:ENSSSCT00000030949
Uniprot:I3L6W7
Length = 225
Score = 95 (38.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 23/103 (22%), Positives = 52/103 (50%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ + A ++ + GL + +E +Q+ +L H++T+HP F
Sbjct: 121 KFNALELDDSDLSLFVAAIICCGDRPGLLNVGHIERMQEGIVHVLKLHLQTNHPDDVFLF 180
Query: 140 GRLLLMTSQCRNIPSARVQHI-FFAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + KT A+ ++ LL ++Y++
Sbjct: 181 PKLLQKLADLRQLVTEHAQLVQVIKKTEADAALHPLLQEIYRD 223
Score = 50 (22.7 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++P FA+L DQV
Sbjct: 46 EFAKSIPGFASLDLNDQV 63
>UNIPROTKB|F5H830 [details] [associations]
symbol:PPARD "Peroxisome proliferator-activated receptor
delta" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008366 "axon ensheathment" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0015908 "fatty acid transport"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031589 "cell-substrate adhesion" evidence=IEA] [GO:0042060
"wound healing" evidence=IEA] [GO:0042640 "anagen" evidence=IEA]
[GO:0043616 "keratinocyte proliferation" evidence=IEA] [GO:0045598
"regulation of fat cell differentiation" evidence=IEA] [GO:0050680
"negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0051546 "keratinocyte migration" evidence=IEA]
[GO:0060612 "adipose tissue development" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003075 InterPro:IPR008946
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00398 PRINTS:PR01288
PRINTS:PR01290 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0043616 GO:GO:0030154 GO:GO:0046872
GO:GO:0008284 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 SUPFAM:SSF48508 GO:GO:0014068
GO:GO:0060612 GO:GO:0015908 GO:GO:0006635 GO:GO:0000122
GO:GO:0001890 GO:GO:0042060 GO:GO:0030522 GO:GO:0042640
GO:GO:0045598 GO:GO:0050680 GO:GO:0031589 GO:GO:0008366
EMBL:AL022721 GO:GO:0051546 HGNC:HGNC:9235 ChiTaRS:PPARD
IPI:IPI01009482 ProteinModelPortal:F5H830 SMR:F5H830
Ensembl:ENST00000540939 ArrayExpress:F5H830 Bgee:F5H830
Uniprot:F5H830
Length = 338
Score = 101 (40.6 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 27/103 (26%), Positives = 50/103 (48%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A A ++ + GL + +VE +QD L H++ +HP F
Sbjct: 234 KFNALELDDSDLALFIAAIILCGDRPGLMNVPRVEAIQDTILRALEFHLQANHPDAQYLF 293
Query: 140 GRLLLMTSQCRNIPSARVQHIF-FAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + KT TS+ LL ++YK+
Sbjct: 294 PKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKD 336
Score = 48 (22.0 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++PSF++L DQV
Sbjct: 159 EFAKSIPSFSSLFLNDQV 176
>UNIPROTKB|A4IFL4 [details] [associations]
symbol:PPARD "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070539 "linoleic acid binding" evidence=IEA]
[GO:0060612 "adipose tissue development" evidence=IEA] [GO:0051546
"keratinocyte migration" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
evidence=IEA] [GO:0043616 "keratinocyte proliferation"
evidence=IEA] [GO:0042640 "anagen" evidence=IEA] [GO:0042060 "wound
healing" evidence=IEA] [GO:0031589 "cell-substrate adhesion"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0015908 "fatty acid transport" evidence=IEA] [GO:0014068
"positive regulation of phosphatidylinositol 3-kinase cascade"
evidence=IEA] [GO:0008366 "axon ensheathment" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0008144 "drug binding" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0006635 "fatty acid
beta-oxidation" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003074 InterPro:IPR003075 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01290 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0006915 GO:GO:0045893 GO:GO:0043616 GO:GO:0030154
GO:GO:0046872 GO:GO:0008144 GO:GO:0008284 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0014068 GO:GO:0060612
GO:GO:0015908 GO:GO:0006635 GO:GO:0000122 GO:GO:0001890
GO:GO:0042060 GO:GO:0042640 GO:GO:0045598 GO:GO:0050680
GO:GO:0031589 GO:GO:0008366 eggNOG:NOG266867
GeneTree:ENSGT00700000104361 GO:GO:0070539 GO:GO:0051546
HOGENOM:HOG000261626 HOVERGEN:HBG106004 OrthoDB:EOG4FFD1Q CTD:5467
KO:K04504 OMA:SSLFLND EMBL:DAAA02054950 EMBL:BC134636
IPI:IPI00699355 RefSeq:NP_001077105.1 UniGene:Bt.13264 SMR:A4IFL4
STRING:A4IFL4 Ensembl:ENSBTAT00000023319 GeneID:353106
KEGG:bta:353106 InParanoid:A4IFL4 NextBio:20812691 Uniprot:A4IFL4
Length = 441
Score = 106 (42.4 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A A ++ + GL + QVE +QD L H++ +HP F
Sbjct: 337 KFNALELDDSDLALFIAAIILCGDRPGLMNVSQVEAIQDTILRALEFHLQANHPDAQYLF 396
Query: 140 GRLLLMTSQCRNIPSARVQHIF-FAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + KT TS+ LL ++YK+
Sbjct: 397 PKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKD 439
Score = 44 (20.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++PSF L DQV
Sbjct: 262 EFAKSIPSFGDLFLNDQV 279
>ZFIN|ZDB-GENE-990415-212 [details] [associations]
symbol:pparda "peroxisome proliferator-activated
receptor delta a" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006950 "response to stress" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003074
InterPro:IPR003075 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01288 PRINTS:PR01290 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-212 GO:GO:0005634
GO:GO:0006950 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104361
EMBL:FP067424 IPI:IPI00488450 Ensembl:ENSDART00000123458
Ensembl:ENSDART00000149743 Uniprot:F1QJT0
Length = 496
Score = 115 (45.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 29/103 (28%), Positives = 52/103 (50%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A A ++ + GL + QVE +QD L QH++ +HP F
Sbjct: 392 KFNALELDDSDLALFVAAIILCGDRPGLMNVHQVEKIQDSILQALNQHLQLNHPDGRFIF 451
Query: 140 GRLLLMTSQCRNIPSARVQHIF-FAKTVANTSMEKLLCDMYKN 181
RLL + R + + Q + KT + TS+ LL ++Y++
Sbjct: 452 PRLLQKLADLRQLVTENAQLVQKIKKTESETSLHPLLQEIYRD 494
>ZFIN|ZDB-GENE-040702-6 [details] [associations]
symbol:nr5a1b "nuclear receptor subfamily 5, group A,
member 1b" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040702-6 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
eggNOG:NOG240365 GeneTree:ENSGT00670000097927 EMBL:AL772368
InterPro:IPR016355 PIRSF:PIRSF002530 HOGENOM:HOG000063718
HOVERGEN:HBG106677 EMBL:FP016184 EMBL:FP085418 EMBL:BC162252
EMBL:BC162260 EMBL:AY212920 IPI:IPI00497101 RefSeq:NP_997999.1
UniGene:Dr.30454 HSSP:P45448 SMR:Q800U8 Ensembl:ENSDART00000028265
GeneID:405759 KEGG:dre:405759 CTD:405759 InParanoid:Q800U8
OMA:YCITANS OrthoDB:EOG4P2Q2C NextBio:20817729 Uniprot:Q800U8
Length = 502
Score = 115 (45.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 77 VLQRFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQP 136
++QR + + +D E ACLK ++LF + + L++ VE++ +Q L ++ +P P
Sbjct: 393 LVQRLQELQLDRRETACLKYLILFNPDVKLLENQPYVESVYEQVNAALLEYTLCAYPQFP 452
Query: 137 ARFGRLLLMTSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
RF ++LL + R + S ++ + LL +M
Sbjct: 453 DRFSQILLRLPELRALSSQAEDYLCYKHLSGEVPCNNLLIEM 494
>UNIPROTKB|G3X6X1 [details] [associations]
symbol:G3X6X1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0048566 "embryonic digestive
tract development" evidence=IEA] [GO:0048048 "embryonic eye
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0008285 GO:GO:0022008 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0043065 GO:GO:0048566 GO:GO:0035264 GO:GO:0035116
GO:GO:0048048 GO:GO:0001657 GO:GO:0021756 GO:GO:0032331
GO:GO:0003417 GO:GO:0003708 GO:GO:0061037 GO:GO:0055012
GeneTree:ENSGT00680000099662 EMBL:DAAA02061104 EMBL:DAAA02061105
EMBL:DAAA02061106 EMBL:DAAA02061107 EMBL:DAAA02061108
ProteinModelPortal:G3X6X1 Ensembl:ENSBTAT00000015305 OMA:DVFICIN
Uniprot:G3X6X1
Length = 446
Score = 103 (41.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 24/96 (25%), Positives = 48/96 (50%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D AE L A+ L + + L++ +V+ LQ+ L ++R P++P F ++L+
Sbjct: 312 MDDAETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPSKPHMFPKILMK 371
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYKN 181
+ R+I + + + K SM L+ +M +N
Sbjct: 372 ITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLEN 407
Score = 48 (22.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 3 VKWAKNLPSFAALPFRDQV 21
V++AK LP F L DQ+
Sbjct: 231 VEFAKRLPGFTGLTIADQI 249
>UNIPROTKB|E1BXV1 [details] [associations]
symbol:NR5A1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001723 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
SMART:SM00430 GO:GO:0005634 GO:GO:0030154 GO:GO:0005543
GO:GO:0003677 GO:GO:0003707 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0003705 GO:GO:0051457
GO:GO:2000195 GeneTree:ENSGT00670000097927 EMBL:AADN02026333
EMBL:AADN02026334 EMBL:AADN02026335 EMBL:AADN02026336
EMBL:AADN02026337 IPI:IPI00570723 Ensembl:ENSGALT00000001616
Uniprot:E1BXV1
Length = 167
Score = 106 (42.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 23/93 (24%), Positives = 46/93 (49%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
VD EF CLK ++LF + + L++ ++ Q++A L ++ H+P +F +LLL
Sbjct: 69 VDRQEFVCLKFLILFSLDVKYLENHALAKDAQEKANAALLEYTVCHYPHCTDKFRQLLLR 128
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDM 178
++ R + ++++ LL +M
Sbjct: 129 LTEVRALSMQAEEYLYHKHLSGEVPCNNLLIEM 161
>UNIPROTKB|F1RS46 [details] [associations]
symbol:RARB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0048566 "embryonic digestive
tract development" evidence=IEA] [GO:0048048 "embryonic eye
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 Pfam:PF00104 PRINTS:PR00398
PRINTS:PR01292 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0022008 GO:GO:0043565 GO:GO:0003707 Gene3D:1.10.565.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0001657 GO:GO:0021756 GO:GO:0032331 GO:GO:0003417
GO:GO:0003708 GO:GO:0061037 GO:GO:0055012
GeneTree:ENSGT00680000099662 EMBL:CU582923 EMBL:FP012232
Ensembl:ENSSSCT00000012278 OMA:KEGSACS Uniprot:F1RS46
Length = 303
Score = 99 (39.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E L A+ L + + L++ +V+ LQ+ L ++R P++P F ++L+
Sbjct: 169 MDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRRRRPSKPHMFPKILMK 228
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYKN 181
+ R+I + + + K SM L+ +M +N
Sbjct: 229 ITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLEN 264
Score = 48 (22.0 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 3 VKWAKNLPSFAALPFRDQV 21
V++AK LP F L DQ+
Sbjct: 88 VEFAKRLPGFTGLTIADQI 106
>UNIPROTKB|A9XAM2 [details] [associations]
symbol:PPARD "Peroxisome proliferator-activated receptor
delta" species:9823 "Sus scrofa" [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0070539 "linoleic acid
binding" evidence=IEA] [GO:0060612 "adipose tissue development"
evidence=IEA] [GO:0051546 "keratinocyte migration" evidence=IEA]
[GO:0050680 "negative regulation of epithelial cell proliferation"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045598 "regulation of fat cell
differentiation" evidence=IEA] [GO:0043616 "keratinocyte
proliferation" evidence=IEA] [GO:0042640 "anagen" evidence=IEA]
[GO:0042060 "wound healing" evidence=IEA] [GO:0031589
"cell-substrate adhesion" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015908 "fatty acid transport"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0008366
"axon ensheathment" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0008144 "drug binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003074 InterPro:IPR003075
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01288 PRINTS:PR01290
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0006915 GO:GO:0045893 GO:GO:0043616
GO:GO:0030154 GO:GO:0046872 GO:GO:0008144 GO:GO:0008284
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0014068
GO:GO:0060612 GO:GO:0015908 GO:GO:0006635 GO:GO:0000122
GO:GO:0001890 GO:GO:0042060 GO:GO:0042640 GO:GO:0045598
GO:GO:0050680 GO:GO:0031589 GO:GO:0008366 eggNOG:NOG266867
GeneTree:ENSGT00700000104361 GO:GO:0070539 GO:GO:0051546
HOGENOM:HOG000261626 HOVERGEN:HBG106004 CTD:5467 KO:K04504
OMA:SSLFLND EMBL:CU467978 EMBL:EF079119 EMBL:EU169095 EMBL:GU565977
EMBL:GU565976 RefSeq:NP_001123713.1 RefSeq:NP_999317.2
UniGene:Ssc.15972 SMR:A9XAM2 STRING:A9XAM2
Ensembl:ENSSSCT00000001714 GeneID:397297 KEGG:ssc:397297
Uniprot:A9XAM2
Length = 441
Score = 106 (42.4 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 28/103 (27%), Positives = 50/103 (48%)
Query: 80 RFRLVGVDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARF 139
+F + +D ++ A A ++ + GL + QVE +QD L H++ +HP F
Sbjct: 337 KFNALELDDSDLALFIAAIILCGDRPGLMNVSQVEAIQDTILRALEFHLQANHPDAQYLF 396
Query: 140 GRLLLMTSQCRNIPSARVQHIF-FAKTVANTSMEKLLCDMYKN 181
+LL + R + + Q + KT TS+ LL ++YK+
Sbjct: 397 PKLLQKMADLRQLVTEHAQMMQRIKKTETETSLHPLLQEIYKD 439
Score = 42 (19.8 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 4 KWAKNLPSFAALPFRDQV 21
++AK++PSF L DQV
Sbjct: 262 EFAKSIPSFDHLFLNDQV 279
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 50 FNASEHVA-AVPNGKASQTA 68
FN ++ A A+ GKAS TA
Sbjct: 190 FNMTKKKARAILTGKASHTA 209
>ZFIN|ZDB-GENE-980526-72 [details] [associations]
symbol:rarab "retinoic acid receptor, alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003708
"retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-72 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX537121 EMBL:CR392003
IPI:IPI00993231 Ensembl:ENSDART00000126022 Uniprot:E7EZ95
Length = 460
Score = 102 (41.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D AE L A+ L + + L+ S +V+ LQ+ L +VR P +P F ++L+
Sbjct: 318 MDDAETGLLSAICLLCGDRQDLEQSDKVDELQEPLLEALKIYVRNRRPHKPHMFPKMLMK 377
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYKN 181
+ R+I + + + K SM L+ +M +N
Sbjct: 378 ITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLEN 413
Score = 48 (22.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 3 VKWAKNLPSFAALPFRDQV 21
V++AK LP F L DQ+
Sbjct: 237 VEFAKQLPGFTTLTIADQI 255
>UNIPROTKB|F1NQH5 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0043065 GO:GO:0032331 GO:GO:0003708 GO:GO:0061037
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI01017311 Ensembl:ENSGALT00000018429
Ensembl:ENSGALT00000037746 Uniprot:F1NQH5
Length = 359
Score = 99 (39.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/96 (23%), Positives = 47/96 (48%)
Query: 86 VDPAEFACLKAVVLFKSETRGLKDSLQVENLQDQAQVMLAQHVRTHHPAQPARFGRLLLM 145
+D E L A+ L + + L++ ++V+ LQ+ L ++R P +P F ++L+
Sbjct: 261 MDDTETGLLSAICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKRRPNKPHMFPKILMK 320
Query: 146 TSQCRNIPSARVQHIFFAKTVANTSMEKLLCDMYKN 181
+ R+I + + + K SM L+ +M +N
Sbjct: 321 ITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLEN 356
Score = 49 (22.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 3 VKWAKNLPSFAALPFRDQV 21
V++AK LP F +L DQ+
Sbjct: 180 VEFAKRLPGFTSLTIADQI 198
WARNING: HSPs involving 52 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.132 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 181 169 0.00082 108 3 11 22 0.47 31
31 0.47 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 302
No. of states in DFA: 587 (62 KB)
Total size of DFA: 147 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.03u 0.08s 16.11t Elapsed: 00:00:12
Total cpu time: 16.07u 0.08s 16.15t Elapsed: 00:00:13
Start: Thu Aug 15 10:54:43 2013 End: Thu Aug 15 10:54:56 2013
WARNINGS ISSUED: 2