BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1789
(499 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 9/257 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 59 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 118
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 119 CLRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASK 171
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 291
Query: 470 CWAMNPEGRPTFPQLHS 486
CW E RP+F +L S
Sbjct: 292 CWHPKAEMRPSFSELVS 308
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 9/257 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 58 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 117
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 118 CLRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASK 170
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 290
Query: 470 CWAMNPEGRPTFPQLHS 486
CW E RP+F +L S
Sbjct: 291 CWHPKAEMRPSFSELVS 307
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 189 bits (479), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 9/257 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 32 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 91
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 92 CLRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASK 144
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 264
Query: 470 CWAMNPEGRPTFPQLHS 486
CW E RP+F +L S
Sbjct: 265 CWHPKAEMRPSFSELVS 281
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 274 WHPKAEMRPSFSELVS 289
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 39 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 98
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 99 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASKK 151
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 211
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 212 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 271
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 272 WHPKAEMRPSFSELVS 287
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 38 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 97
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 98 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASKK 150
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 210
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 211 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 270
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 271 WHPKAEMRPSFSELVS 286
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 41 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 100
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 101 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASKK 153
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 213
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 214 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 274 WHPKAEMRPSFSELVS 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 212
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 272
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 273 WHPKAEMRPSFSELVS 288
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 188 bits (478), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/256 (36%), Positives = 143/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 36 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 95
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 96 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASKK 148
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ +Y+ + + PVKW+A+ESL +
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQK 208
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 209 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 268
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 269 WHPKAEMRPSFSELVS 284
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 185 bits (469), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 142/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 100 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 159
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G+++
Sbjct: 160 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKFLASKK 212
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ ++ + + PVKW+A+ESL +
Sbjct: 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 272
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 273 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 332
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 333 WHPKAEMRPSFSELVS 348
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 142/257 (55%), Gaps = 9/257 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 38 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 97
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G+++
Sbjct: 98 CLRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKFLASK 150
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+K +++ D LARD++ ++ + + PVKW+A+ESL +
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 270
Query: 470 CWAMNPEGRPTFPQLHS 486
CW E RP+F +L S
Sbjct: 271 CWHPKAEMRPSFSELVS 287
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 142/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G+++
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ ++ + + PVKW+A+ESL +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 274
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 275 WHPKAEMRPSFSELVS 290
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 185 bits (469), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/255 (35%), Positives = 141/255 (55%), Gaps = 9/255 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 45 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 104
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G+++
Sbjct: 105 CLRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKFLASK 157
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+K +++ D LARD++ ++ + + PVKW+A+ESL +
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 277
Query: 470 CWAMNPEGRPTFPQL 484
CW E RP+F +L
Sbjct: 278 CWHPKAEMRPSFSEL 292
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 142/257 (55%), Gaps = 9/257 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 40 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 99
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G+++
Sbjct: 100 CLRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+K +++ D LARD++ ++ + + PVKW+A+ESL +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 272
Query: 470 CWAMNPEGRPTFPQLHS 486
CW E RP+F +L S
Sbjct: 273 CWHPKAEMRPSFSELVS 289
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 142/257 (55%), Gaps = 9/257 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 40 RGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGI 99
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G+++
Sbjct: 100 CLRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKFLASK 152
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+K +++ D LARD++ ++ + + PVKW+A+ESL +
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLK 272
Query: 470 CWAMNPEGRPTFPQLHS 486
CW E RP+F +L S
Sbjct: 273 CWHPKAEMRPSFSELVS 289
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 184 bits (468), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/256 (35%), Positives = 141/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 40 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 99
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G++Y
Sbjct: 100 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKYLASKK 152
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD++ + + + PVKW+A+ESL +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQK 212
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 213 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 272
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 273 WHPKAEMRPSFSELVS 288
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/256 (35%), Positives = 141/256 (55%), Gaps = 9/256 (3%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG VY GT + DG + VK++ +VS L EG+ M SH N+L++LG+
Sbjct: 42 GHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGIC 101
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ SP ++ PY + +L+ F++ H T ++++ LQ+ G+++
Sbjct: 102 LRSEGSPLVVLPYMKHGDLRNFIRN-------ETHNPTVKDLIGFGLQVAKGMKFLASKK 154
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHKT 410
A RNC++D+K +++ D LARD+ ++ + + PVKW+A+ESL +
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQK 214
Query: 411 FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYC 470
F+T SDVW+FGVLLWEL T PY +++ F++ L G RL QP CPD L+ VM C
Sbjct: 215 FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 274
Query: 471 WAMNPEGRPTFPQLHS 486
W E RP+F +L S
Sbjct: 275 WHPKAEMRPSFSELVS 290
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 155/294 (52%), Gaps = 7/294 (2%)
Query: 207 NKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT-DNASAV 265
+++L KL ++ I R + L + EG FG V G +EDG +V VKT+ DN+S
Sbjct: 19 SEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQR 78
Query: 266 QVSLLLQEGMAMYGLSHKNILTVLGVSIEDHT----SPFLIYPYQDYTNLKRFLQKCKLC 321
++ L E M SH N++ +LGV IE + P +I P+ Y +L +L +L
Sbjct: 79 EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRL- 137
Query: 322 PEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARD 381
G H + Q ++ + I +G++Y A RNC++ D + + + D L++
Sbjct: 138 ETGPKH-IPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKK 196
Query: 382 LFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF 441
++ DY+ G PVKW+AIESL + +++ SDVWAFGV +WE+ T PY +
Sbjct: 197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH 256
Query: 442 EMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQL 495
EM L G+RL QP +C DEL+ +M CW +P RPTF L L++ L
Sbjct: 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 183 bits (464), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/252 (35%), Positives = 140/252 (55%), Gaps = 9/252 (3%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
+G FG VY G Y ++ + +K+++ QV L+EG+ M GL+H N+L ++G+
Sbjct: 31 KGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGI 90
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ P ++ PY + +L +F++ + P T ++++ LQ+ G++Y
Sbjct: 91 MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNP-------TVKDLISFGLQVARGMEYLAEQ 143
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR--PVKWLAIESLVHK 409
A RNC++D+ +++ D LARD+ +Y+ + + + PVKW A+ESL
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F+T SDVW+FGVLLWEL T PY IDPF++ L G RL QP CPD L+ VM
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQ 263
Query: 470 CWAMNPEGRPTF 481
CW +P RPTF
Sbjct: 264 CWEADPAVRPTF 275
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 150/281 (53%), Gaps = 9/281 (3%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL---- 329
M G + +++ +LGV + ++ + +LK +L+ + PE +
Sbjct: 71 ASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENNPGRPPP 127
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T QE++ M +I G+ Y A RNC+V ++I D + RD++ +DY+
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + D
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
G L+QP NCP+ + +M CW NP+ RPTF ++ + L++
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 149/281 (53%), Gaps = 9/281 (3%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 12 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 71
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL---- 329
M G + +++ +LGV + ++ + +LK +L+ + PE +
Sbjct: 72 ASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENNPGRPPP 128
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T QE++ M +I G+ Y A RNC+V ++I D + RD++ +DY+
Sbjct: 129 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 188
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + D
Sbjct: 189 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 248
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
G L+QP NCP+ + +M CW NP RPTF ++ + L++
Sbjct: 249 GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 289
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 149/281 (53%), Gaps = 9/281 (3%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL---- 329
M G + +++ +LGV + ++ + +LK +L+ + PE +
Sbjct: 71 ASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENNPGRPPP 127
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T QE++ M +I G+ Y A RNC+V ++I D + RD++ +DY+
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYR 187
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + D
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
G L+QP NCP+ + +M CW NP RPTF ++ + L++
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 149/278 (53%), Gaps = 9/278 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 13 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 72
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL----TTQ 332
M G + +++ +LGV + ++ + +LK +L+ L PE + T Q
Sbjct: 73 MKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRS--LRPEAENNPGRPPPTLQ 129
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
E++ M +I G+ Y A RNC+V ++I D + RD++ +DY+ G
Sbjct: 130 EMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + DG
Sbjct: 190 KGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY 249
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L+QP NCP+ + +M CW NP+ RPTF ++ + L++
Sbjct: 250 LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 149/281 (53%), Gaps = 9/281 (3%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL---- 329
M G + +++ +LGV + ++ + +LK +L+ + PE +
Sbjct: 71 ASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENNPGRPPP 127
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T QE++ M +I G+ Y A RNC+V ++I D + RD++ + Y+
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYR 187
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + D
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
G L+QP NCP+ + +M CW NP+ RPTF ++ + L++
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 146/296 (49%), Gaps = 8/296 (2%)
Query: 207 NKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTV-TDNASAV 265
+ +L EKL ++ I + L + +G FG V +EDG +V VK + D ++
Sbjct: 8 SDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASS 67
Query: 266 QVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTS-----PFLIYPYQDYTNLKRFLQKCKL 320
+ L+E M H ++ ++GVS+ P +I P+ + +L FL ++
Sbjct: 68 DIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI 127
Query: 321 CPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR 380
L Q +V + I G++Y A RNC++ + + + + D L+R
Sbjct: 128 GEN--PFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185
Query: 381 DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDP 440
++ DY+ G PVKWLA+ESL ++ SDVWAFGV +WE+ T Q PYA I+
Sbjct: 186 KIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN 245
Query: 441 FEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLT 496
E+ L G RL QP C +E++ +M CW+ +P+ RP+F L L+ L+
Sbjct: 246 AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 9/281 (3%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 8 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 67
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL---- 329
M G + +++ +LGV + ++ + +LK +L+ + PE +
Sbjct: 68 ASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENNPGRPPP 124
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T QE++ M +I G+ Y A RNC+V ++I D + RD+ +D
Sbjct: 125 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 184
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + D
Sbjct: 185 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 244
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
G L+QP NCP+ + +M CW NP+ RPTF ++ + L++
Sbjct: 245 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 285
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 147/281 (52%), Gaps = 9/281 (3%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL---- 329
M G + +++ +LGV + ++ + +LK +L+ + PE +
Sbjct: 71 ASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENNPGRPPP 127
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T QE++ M +I G+ Y A RNC+V ++I D + RD+ +D
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + D
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
G L+QP NCP+ + +M CW NP+ RPTF ++ + L++
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKD 288
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 89/281 (31%), Positives = 146/281 (51%), Gaps = 9/281 (3%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ L +G+FG VY G + + E V VKTV ++AS + L E
Sbjct: 11 EWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE 70
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL---- 329
M G + +++ +LGV + ++ + +LK +L+ + PE +
Sbjct: 71 ASVMKGFTCHHVVRLLGV-VSKGQPTLVVMELMAHGDLKSYLRSLR--PEAENNPGRPPP 127
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T QE++ M +I G+ Y A RNC+V ++I D + RD+ +D
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXR 187
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G PV+W+A ESL F+T+SD+W+FGV+LWE+T+LA+QPY + ++ + D
Sbjct: 188 KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMD 247
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
G L+QP NCP+ + +M CW NP RPTF ++ + L++
Sbjct: 248 GGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKD 288
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 137/278 (49%), Gaps = 19/278 (6%)
Query: 232 EGTFGRVYRGTYTEEDGVE--EEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
EG FG+V + T G V VK + +NAS ++ LL E + ++H +++ +
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGV----------------AHTLTTQE 333
G +D LI Y Y +L+ FL++ + G LT +
Sbjct: 93 GACSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 334 VVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDN 393
++ QI G+QY A RN +V + +++I+D L+RD++ D +
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQ 211
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+AIESL ++T SDVW+FGVLLWE+ TL PY I P + L+ G+R+
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+P NC +E++ +M CW P+ RP F + L++
Sbjct: 272 ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 232 EGTFGRVYRGTYTEEDGVE--EEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
EG FG+V + T G V VK + +NAS ++ LL E + ++H +++ +
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGV----------------AHTLTTQE 333
G +D LI Y Y +L+ FL++ + G LT +
Sbjct: 93 GACSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 334 VVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDN 393
++ QI G+QY A RN +V + +++I+D L+RD++ D
Sbjct: 152 LISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+AIESL ++T SDVW+FGVLLWE+ TL PY I P + L+ G+R+
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+P NC +E++ +M CW P+ RP F + L++
Sbjct: 272 ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 232 EGTFGRVYRGTYTEEDGVE--EEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
EG FG+V + T G V VK + +NAS ++ LL E + ++H +++ +
Sbjct: 33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLY 92
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGV----------------AHTLTTQE 333
G +D LI Y Y +L+ FL++ + G LT +
Sbjct: 93 GACSQDGPL-LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGD 151
Query: 334 VVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDN 393
++ QI G+QY A RN +V + +++I+D L+RD++ D
Sbjct: 152 LISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQ 211
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+AIESL ++T SDVW+FGVLLWE+ TL PY I P + L+ G+R+
Sbjct: 212 GRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRM 271
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+P NC +E++ +M CW P+ RP F + L++
Sbjct: 272 ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCK--LCPEGVAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + + V +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 258 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 145/279 (51%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCK--LCPEGVAHTLTT 331
M + +++ +LGV + +I +LK +L+ + + V +
Sbjct: 69 ASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 128 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 187
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 188 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 247
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 248 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + +I +LK +L+ + E V +
Sbjct: 101 ASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 160 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 219
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 220 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 279
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 280 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + E V +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 244
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 245 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 145/279 (51%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + +I +LK +L+ + E V +
Sbjct: 73 ASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 132 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 191
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 251
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 252 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + E V +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 131 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 250
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 251 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + E V +
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 129 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 189 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 248
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 249 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + E V +
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 131 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 191 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 250
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 251 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 146/279 (52%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + E V +
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD++ +DY+ G
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 198 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 257
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 258 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 137/277 (49%), Gaps = 15/277 (5%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQE 273
L + ++R + + G FG VY G + + V VKT+ ++ ++V L+E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKE 57
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQ 332
M + H N++ +LGV + PF +I + Y NL +L++C ++
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECN------RQEVSAV 109
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++ M QI ++Y A RNC+V + +++ D L+R L D
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHA 168
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
P+KW A ESL + FS SDVWAFGVLLWE+ T PY IDP ++ L+ YR
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +P CP++++ +M CW NP RP+F ++H +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 15/277 (5%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQE 273
L + ++R + + G +G VY G + + V VKT+ ++ ++V L+E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKE 57
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQ 332
M + H N++ +LGV + PF +I + Y NL +L++C ++
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIIIEFMTYGNLLDYLRECN------RQEVSAV 109
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++ M QI ++Y A RNC+V + +++ D L+R L D
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHA 168
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
P+KW A ESL + FS SDVWAFGVLLWE+ T PY IDP ++ L+ YR
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +P CP++++ +M CW NP RP+F ++H +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 15/277 (5%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQE 273
L + ++R + + G +G VY G + + V VKT+ ++ ++V L+E
Sbjct: 3 LDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKE 57
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQ 332
M + H N++ +LGV + PF +I + Y NL +L++C ++
Sbjct: 58 AAVMKEIKHPNLVQLLGVCTRE--PPFYIITEFMTYGNLLDYLRECN------RQEVSAV 109
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++ M QI ++Y A RNC+V + +++ D L+R L D
Sbjct: 110 VLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTFTAHA 168
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
P+KW A ESL + FS SDVWAFGVLLWE+ T PY IDP ++ L+ YR
Sbjct: 169 GAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYR 228
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +P CP++++ +M CW NP RP+F ++H +
Sbjct: 229 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFE 265
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 145/272 (53%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+T+LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIITLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + E V +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC V + ++I D + RD++ +DY+ G
Sbjct: 125 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 185 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 244
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD L +M CW NP+ RP+F ++ S ++E
Sbjct: 245 LLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT- 328
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ ++
Sbjct: 82 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEYSY 137
Query: 329 ---------LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 258 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 18 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 74
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT- 328
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ ++
Sbjct: 75 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEYSY 130
Query: 329 ---------LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 191 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 250
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 251 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 295
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 66 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 122
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT- 328
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ ++
Sbjct: 123 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEYSY 178
Query: 329 ---------LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 239 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 298
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 299 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 343
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 17 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 73
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT- 328
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ ++
Sbjct: 74 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEYSY 129
Query: 329 ---------LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 190 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 249
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 250 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 294
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 14 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 70
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT- 328
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ ++
Sbjct: 71 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEYSY 126
Query: 329 ---------LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 187 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 246
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 247 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 291
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 149/285 (52%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT- 328
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ ++
Sbjct: 82 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARE--PPGLEYSY 137
Query: 329 ---------LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 258 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 148/285 (51%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 10 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 66
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAH-- 327
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ +
Sbjct: 67 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEYCY 122
Query: 328 --------TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 183 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 242
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 243 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 287
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 148/285 (51%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAH-- 327
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ +
Sbjct: 82 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEYCY 137
Query: 328 --------TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ DY+ N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 198 RDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 258 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 91 EGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 146
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 147 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 203
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 204 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 323
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 324 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 355
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIINLLGACTQDGPL-YVIVAYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 231 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C ++ ++ M QI ++Y
Sbjct: 286 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 396
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 456
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 457 QWNPSDRPSFAEIHQAFE 474
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIINLLGACTQDGPL-YVIVGYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 17/295 (5%)
Query: 201 SRLDDRNKDLH-EKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT 259
S +D ++L+ + + + ++R + + G +G VY G + + V VKT+
Sbjct: 10 SGVDLGTENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKK---YSLTVAVKTLK 66
Query: 260 DNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPF-LIYPYQDYTNLKRFLQKC 318
++ ++V L+E M + H N++ +LGV + PF ++ Y Y NL +L++C
Sbjct: 67 EDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTLE--PPFYIVTEYMPYGNLLDYLREC 122
Query: 319 KLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNAL 378
+T ++ M QI ++Y A RNC+V + +++ D L
Sbjct: 123 N------REEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGL 176
Query: 379 ARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEI 438
+R L D + P+KW A ESL + TFS SDVWAFGVLLWE+ T PY I
Sbjct: 177 SR-LMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGI 235
Query: 439 DPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE-FH 492
D ++ L+ GYR+ QP CP +++ +M CW +P RP+F + H + FH
Sbjct: 236 DLSQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFH 290
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 145 bits (365), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 37 EGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 92
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 93 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 149
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 150 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 209
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 210 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 269
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 270 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 301
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIIHLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 91/272 (33%), Positives = 144/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 34 EGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 89
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 90 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 146
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ DY+
Sbjct: 147 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 266
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 267 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 298
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 270 GQYGEVYEGVWKK---YSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 325 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 376
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 435
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 436 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 495
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 496 QWNPSDRPSFAEIHQAFE 513
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 24 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C ++ ++ M QI ++Y
Sbjct: 79 TRE--PPFYIIIEFMTYGNLLDYLRECN------RQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 249
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 250 QWNPSDRPSFAEIHQAFE 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 24 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C ++ ++ M QI ++Y
Sbjct: 79 TRE--PPFYIIIEFMTYGNLLDYLRECN------RQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 249
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 250 QWNPSDRPSFAEIHQAFE 267
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 24 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C ++ ++ M QI ++Y
Sbjct: 79 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 249
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 250 QWNPSDRPSFAEIHQAFE 267
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 29 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C ++ ++ M QI ++Y
Sbjct: 84 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 254
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 255 QWNPSDRPSFAEIHQAFE 272
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 228 GQYGEVYEGVWKK---YSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 283 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 334
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 393
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 394 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 453
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 454 QWNPSDRPSFAEIHQAFE 471
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 142/279 (50%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + +I +LK +L+ + E V +
Sbjct: 73 ASVMKEFNCHHVVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD+ +D G
Sbjct: 132 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 191
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 251
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD LF +M CW NP+ RP+F ++ S ++E
Sbjct: 252 LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 130/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 24 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C ++ ++ M QI ++Y
Sbjct: 79 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 249
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 250 QWNPSDRPSFAEIHQAFE 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 29 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 84 TRE--PPFYIIIEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 254
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 255 QWNPSDRPSFAEIHQAFE 272
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 26 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 81 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 251
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 252 QWNPSDRPSFAEIHQAFE 269
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 29 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 84 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 254
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 255 QWNPSDRPSFAEIHQAFE 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 26 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 81 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 191
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 251
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 252 QWNPSDRPSFAEIHQAFE 269
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 29 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 84 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 194
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 254
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 255 QWNPSDRPSFAEIHQAFE 272
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 37 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 92 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 143
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 202
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 262
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 263 QWNPSDRPSFAEIHQAFE 280
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 24 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 79 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 249
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 250 QWNPSDRPSFAEIHQAFE 267
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 25 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 80 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKF 190
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 250
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 251 QWNPSDRPSFAEIHQAFE 268
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 24 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 79 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 189
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 249
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 250 QWNPSDRPSFAEIHQAFE 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 28 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 83 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKF 193
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 253
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 254 QWNPSDRPSFAEIHQAFE 271
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 129/258 (50%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 26 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 81 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 132
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D + P+KW A ESL + F
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKF 191
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 251
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 252 QWNPSDRPSFAEIHQAFE 269
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 32 EGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 87
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 88 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 144
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y RN +V + ++I D LARD+ DY+
Sbjct: 145 DLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTT 204
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 205 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 264
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 265 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 296
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 25 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 80 TRE--PPFYIIIEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 131
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D P+KW A ESL + F
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKF 190
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 250
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 251 QWNPSDRPSFAEIHQAFE 268
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 128/258 (49%), Gaps = 15/258 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G +G VY G + + V VKT+ ++ ++V L+E M + H N++ +LGV
Sbjct: 29 GQYGEVYEGVWKKYSLT---VAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ PF +I + Y NL +L++C + ++ M QI ++Y
Sbjct: 84 TRE--PPFYIITEFMTYGNLLDYLRECN------RQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + +++ D L+R L D P+KW A ESL + F
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKF 194
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S SDVWAFGVLLWE+ T PY ID ++ L+ YR+ +P CP++++ +M CW
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 254
Query: 472 AMNPEGRPTFPQLHSCLQ 489
NP RP+F ++H +
Sbjct: 255 QWNPSDRPSFAEIHQAFE 272
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 142/279 (50%), Gaps = 5/279 (1%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQE 273
E + R ++ + +G+FG VY G +D E V +KTV + AS + L E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG--VAHTLTT 331
M + +++ +LGV + + +I +LK +L+ + E V +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPT-LVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG 391
+++ M +I G+ Y A RNC+V + ++I D + RD+ +D G
Sbjct: 123 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 392 DNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY 451
PV+W++ ESL F+T SDVW+FGV+LWE+ TLA+QPY + ++ + +G
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 242
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
L++P NCPD L +M CW NP+ RP+F ++ S ++E
Sbjct: 243 LLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 146/285 (51%), Gaps = 26/285 (9%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLL 271
+ R R+ L EG FG+V E G++++ V VK + +A+ +S L+
Sbjct: 25 LPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLI 81
Query: 272 QEG--MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT- 328
E M M G HKNI+ +LG +D ++I Y NL+ +LQ + P G+ +
Sbjct: 82 SEMEMMKMIG-KHKNIINLLGACTQDGPL-YVIVEYASKGNLREYLQARR--PPGLEFSF 137
Query: 329 ---------LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
L+++++V Q+ G++Y A RN +V + ++I D LA
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD+ D N PVKW+A E+L + ++ SDVW+FGVLLWE+ TL PY +
Sbjct: 198 RDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP 257
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E+ L++G+R+++P NC +EL+ +M CW P RPTF QL
Sbjct: 258 VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 302
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 13/280 (4%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGT-YT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEG 274
I+R + L EG FG+V+ Y E+D + V VKT+ D + + +E
Sbjct: 10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKIL--VAVKTLKDASDNARKDFH-REA 66
Query: 275 MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQK----CKLCPEGVAHT-L 329
+ L H++I+ GV +E +++ Y + +L +FL+ L EG T L
Sbjct: 67 ELLTNLQHEHIVKFYGVCVEG-DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTEL 125
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC 389
T +++ + QI G+ Y ATRNC+V + L ++I D ++RD++ +DY+
Sbjct: 126 TQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
+G + P++W+ ES++++ F+T SDVW+ GV+LWE+ T +QP+ ++ E+ +
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 245
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
G L +P CP E++ +M CW P R +H+ LQ
Sbjct: 246 GRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQ 285
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 142/272 (52%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ ++ +T +
Sbjct: 101 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEYSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ D
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 26/272 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEE-------VLVKTVTDNASAVQVSLLLQEG--MAMYGLSH 282
EG FG+V E G++++ V VK + D+A+ +S L+ E M M G H
Sbjct: 45 EGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-KH 100
Query: 283 KNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQ 332
KNI+ +LG +D ++I Y NL+ +L+ + P G+ + +T +
Sbjct: 101 KNIINLLGACTQDGPL-YVIVEYASKGNLREYLRARR--PPGMEXSYDINRVPEEQMTFK 157
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++V Q+ G++Y A RN +V + ++I D LARD+ D
Sbjct: 158 DLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
N PVKW+A E+L + ++ SDVW+FGVL+WE+ TL PY I E+ L++G+R
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+++P NC +EL+ +M CW P RPTF QL
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 137/276 (49%), Gaps = 19/276 (6%)
Query: 232 EGTFGRVYRGTYTEEDGVEE--EVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
EG FGRV++ E V VK + + ASA + +E M + NI+ +L
Sbjct: 57 EGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLL 116
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQK------CKLCPEGVAH----------TLTTQE 333
GV L++ Y Y +L FL+ C L ++ L+ E
Sbjct: 117 GVCAVGKPM-CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAE 175
Query: 334 VVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDN 393
+ + Q+ G+ Y ATRNC+V + + ++I D L+R+++ +DY+ N
Sbjct: 176 QLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGN 235
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
+ P++W+ ES+ + ++T SDVWA+GV+LWE+ + QPY + E+ ++DG L
Sbjct: 236 DAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL 295
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
P NCP EL+++M CW+ P RP+F +H LQ
Sbjct: 296 ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 146/295 (49%), Gaps = 13/295 (4%)
Query: 207 NKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRG-TYTEEDGVE-EEVLVKTVTDNASA 264
N+ KL E+++ VR E FG+VY+G + G + + V +KT+ D A
Sbjct: 13 NQHKQAKLKEISLSA--VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG 70
Query: 265 VQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFL-QKCKLCPE 323
E M L H N++ +LGV +D +I+ Y + +L FL +
Sbjct: 71 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS-MIFSYCSHGDLHEFLVMRSPHSDV 129
Query: 324 G-------VAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDN 376
G V L + V + QI G++Y ATRN +V DKL ++I+D
Sbjct: 130 GSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL 189
Query: 377 ALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYA 436
L R+++ +DY+ L N P++W+A E++++ FS SD+W++GV+LWE+ + QPY
Sbjct: 190 GLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
Query: 437 EIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ +++ L P +CP ++++M CW P RP F +HS L+ +
Sbjct: 250 GYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/289 (29%), Positives = 144/289 (49%), Gaps = 13/289 (4%)
Query: 213 KLSELTIQRCRVRLFSVNMEGTFGRVYRG-TYTEEDGVE-EEVLVKTVTDNASAVQVSLL 270
KL E+++ VR E FG+VY+G + G + + V +KT+ D A
Sbjct: 2 KLKEISLSA--VRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 271 LQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFL-QKCKLCPEG----- 324
E M L H N++ +LGV +D +I+ Y + +L FL + G
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLS-MIFSYCSHGDLHEFLVMRSPHSDVGSTDDD 118
Query: 325 --VAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL 382
V L + V + QI G++Y ATRN +V DKL ++I+D L R++
Sbjct: 119 RTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 178
Query: 383 FPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE 442
+ +DY+ L N P++W+A E++++ FS SD+W++GV+LWE+ + QPY +
Sbjct: 179 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD 238
Query: 443 MAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+ +++ L P +CP ++++M CW P RP F +HS L+ +
Sbjct: 239 VVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 287
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 15/269 (5%)
Query: 232 EGTFGRVY----RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILT 287
EG FG+V+ E+D + V VK + + + + + +E + L H++I+
Sbjct: 51 EGAFGKVFLAECHNLLPEQDKML--VAVKALKEASESARQDFQ-REAELLTMLQHQHIVR 107
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQK----CKLCPEG---VAHTLTTQEVVDMCLQ 340
GV E +++ Y + +L RFL+ KL G L +++ + Q
Sbjct: 108 FFGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 341 IIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKW 400
+ G+ Y ATRNC+V L ++I D ++RD++ +DY+ +G P++W
Sbjct: 167 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 226
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCP 460
+ ES++++ F+T SDVW+FGV+LWE+ T +QP+ ++ E + G L +P CP
Sbjct: 227 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP 286
Query: 461 DELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
E++++M CW P+ R + +H+ LQ
Sbjct: 287 PEVYAIMRGCWQREPQQRHSIKDVHARLQ 315
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 15/269 (5%)
Query: 232 EGTFGRVY----RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILT 287
EG FG+V+ E+D + V VK + + + + + +E + L H++I+
Sbjct: 28 EGAFGKVFLAECHNLLPEQDKML--VAVKALKEASESARQDFQ-REAELLTMLQHQHIVR 84
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQK----CKLCPEG---VAHTLTTQEVVDMCLQ 340
GV E +++ Y + +L RFL+ KL G L +++ + Q
Sbjct: 85 FFGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 341 IIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKW 400
+ G+ Y ATRNC+V L ++I D ++RD++ +DY+ +G P++W
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 203
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCP 460
+ ES++++ F+T SDVW+FGV+LWE+ T +QP+ ++ E + G L +P CP
Sbjct: 204 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP 263
Query: 461 DELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
E++++M CW P+ R + +H+ LQ
Sbjct: 264 PEVYAIMRGCWQREPQQRHSIKDVHARLQ 292
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 138/269 (51%), Gaps = 15/269 (5%)
Query: 232 EGTFGRVY----RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILT 287
EG FG+V+ E+D + V VK + + + + + +E + L H++I+
Sbjct: 22 EGAFGKVFLAECHNLLPEQDKML--VAVKALKEASESARQDFQ-REAELLTMLQHQHIVR 78
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQK----CKLCPEG---VAHTLTTQEVVDMCLQ 340
GV E +++ Y + +L RFL+ KL G L +++ + Q
Sbjct: 79 FFGVCTEGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 341 IIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKW 400
+ G+ Y ATRNC+V L ++I D ++RD++ +DY+ +G P++W
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW 197
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCP 460
+ ES++++ F+T SDVW+FGV+LWE+ T +QP+ ++ E + G L +P CP
Sbjct: 198 MPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPRACP 257
Query: 461 DELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
E++++M CW P+ R + +H+ LQ
Sbjct: 258 PEVYAIMRGCWQREPQQRHSIKDVHARLQ 286
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 26/291 (8%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS-------AVQVSLLLQEGMA 276
++ V EG FG+V + ++DG+ + +K + + AS A ++ +L + G
Sbjct: 24 IKFQDVIGEGNFGQVLKAR-IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-- 80
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKL--------CPEGVAHT 328
H NI+ +LG + E +L Y + NL FL+K ++ A T
Sbjct: 81 ----HHPNIINLLG-ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 135
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L++Q+++ + G+ Y A RN +V + +I D L+R
Sbjct: 136 LSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKK 195
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ 448
+G PV+W+AIESL + ++T SDVW++GVLLWE+ +L PY + E+ L
Sbjct: 196 TMG---RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 252
Query: 449 DGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
GYRL +P+NC DE++ +M CW P RP+F Q+ L + YV
Sbjct: 253 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 303
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 26/291 (8%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS-------AVQVSLLLQEGMA 276
++ V EG FG+V + ++DG+ + +K + + AS A ++ +L + G
Sbjct: 17 IKFQDVIGEGNFGQVLKAR-IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-- 73
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKL--------CPEGVAHT 328
H NI+ +LG + E +L Y + NL FL+K ++ A T
Sbjct: 74 ----HHPNIINLLG-ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 128
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L++Q+++ + G+ Y A RN +V + +I D L+R
Sbjct: 129 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 188
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ 448
+G PV+W+AIESL + ++T SDVW++GVLLWE+ +L PY + E+ L
Sbjct: 189 TMG---RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 245
Query: 449 DGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
GYRL +P+NC DE++ +M CW P RP+F Q+ L + YV
Sbjct: 246 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 296
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 140/291 (48%), Gaps = 26/291 (8%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS-------AVQVSLLLQEGMA 276
++ V EG FG+V + ++DG+ + +K + + AS A ++ +L + G
Sbjct: 27 IKFQDVIGEGNFGQVLKAR-IKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-- 83
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKL--------CPEGVAHT 328
H NI+ +LG + E +L Y + NL FL+K ++ A T
Sbjct: 84 ----HHPNIINLLG-ACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST 138
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L++Q+++ + G+ Y A RN +V + +I D L+R
Sbjct: 139 LSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKK 198
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ 448
+G PV+W+AIESL + ++T SDVW++GVLLWE+ +L PY + E+ L
Sbjct: 199 TMG---RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP 255
Query: 449 DGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
GYRL +P+NC DE++ +M CW P RP+F Q+ L + YV
Sbjct: 256 QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 12/290 (4%)
Query: 210 LHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLV--KTVTDNASAVQV 267
+H + I+R + L EG FG+V+ ++++LV K + D A +
Sbjct: 3 MHSGIHVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARK 62
Query: 268 SLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQK--------CK 319
+E + L H++I+ GV D +++ Y + +L +FL+
Sbjct: 63 DFQ-REAELLTNLQHEHIVKFYGVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 320 LCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA 379
P L +++ + QI G+ Y ATRNC+V L ++I D ++
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 380 RDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
RD++ +DY+ +G + P++W+ ES++++ F+T SDVW+FGV+LWE+ T +QP+ ++
Sbjct: 181 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
E+ + G L +P CP E++ VM CW P+ R +++ L
Sbjct: 241 NTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILH 290
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 14/284 (4%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAM 277
++ +R V G FG VY+G + + + V+ V +K + +N S +L E M
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
G+ + +LG+ + L+ Y L +++ + L +Q++++
Sbjct: 74 AGVGSPYVSRLLGICLTSTVQ--LVTQLMPYGCLLDHVRENR-------GRLGSQDLLNW 124
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR--DLFPSDYHCLGDNEN 395
C+QI G+ Y A RN +V ++ITD LAR D+ ++YH D
Sbjct: 125 CMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA--DGGK 182
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW+A+ES++ + F+ SDVW++GV +WEL T +PY I E+ L+ G RL Q
Sbjct: 183 VPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQ 242
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
P C +++ +M CW ++ E RP F +L S R+V
Sbjct: 243 PPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMARDPQRFV 286
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ + + L E
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA--FLAEAN 56
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 108
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + + +
Sbjct: 109 DMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAK 167
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 168 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 227
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 228 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 263
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ + + L E
Sbjct: 2 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSLKQGSMSPDA--FLAEAN 55
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 56 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGI--KLTINKLL 107
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + + +
Sbjct: 108 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAK 166
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 167 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 226
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 227 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 60
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 112
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + + +
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAK 171
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 231
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 12 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 65
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 117
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + + +
Sbjct: 118 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAK 176
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 177 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 236
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 237 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 272
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 35 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 94
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K ++L ++
Sbjct: 95 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRK-------YSLDLASLILYA 145
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 146 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 204
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 264
Query: 459 CPDELFSVMAYCWAMNPEGRPTF----PQLHSCLQEFHAQ 494
CP L+S+M CWA +P RP F QL + L+E AQ
Sbjct: 265 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 304
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 66
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 118
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + + +
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAK 177
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 237
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 71
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K ++L ++
Sbjct: 72 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRK-------YSLDLASLILYA 122
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 123 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 181
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 241
Query: 459 CPDELFSVMAYCWAMNPEGRPTF----PQLHSCLQEFHAQ 494
CP L+S+M CWA +P RP F QL + L+E AQ
Sbjct: 242 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 281
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 129/263 (49%), Gaps = 14/263 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEE-EVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G G +E V +KT+ + Q L E M SH NI+ + GV
Sbjct: 55 GEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGV 114
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
I + +I Y + L +FL++ + ++V M I G++Y
Sbjct: 115 -ISKYKPMMIITEYMENGALDKFLREKD-------GEFSVLQLVGMLRGIAAGMKYLANM 166
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALAR---DLFPSDYHCLGDNENRPVKWLAIESLVH 408
A RN +V+ L +++D L+R D + Y G P++W A E++ +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK--IPIRWTAPEAISY 224
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
+ F++ASDVW+FG+++WE+ T ++PY E+ E+ ++ DG+RL P++CP ++ +M
Sbjct: 225 RKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMM 284
Query: 469 YCWAMNPEGRPTFPQLHSCLQEF 491
CW RP F + S L +
Sbjct: 285 QCWQQERARRPKFADIVSILDKL 307
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 17 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 70
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 122
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + + +
Sbjct: 123 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAK 181
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 182 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 241
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 242 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 277
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 9 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K ++L ++
Sbjct: 69 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRK-------YSLDLASLILYA 119
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 120 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 178
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 238
Query: 459 CPDELFSVMAYCWAMNPEGRPTF----PQLHSCLQEFHAQ 494
CP L+S+M CWA +P RP F QL + L+E AQ
Sbjct: 239 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 278
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 10 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 69
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K ++L ++
Sbjct: 70 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRK-------YSLDLASLILYA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 121 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTF----PQLHSCLQEFHAQ 494
CP L+S+M CWA +P RP F QL + L+E AQ
Sbjct: 240 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 279
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 133/280 (47%), Gaps = 14/280 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 4 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 63
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K ++L ++
Sbjct: 64 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRK-------YSLDLASLILYA 114
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 173
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 233
Query: 459 CPDELFSVMAYCWAMNPEGRPTF----PQLHSCLQEFHAQ 494
CP L+S+M CWA +P RP F QL + L+E AQ
Sbjct: 234 CPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEKAQ 273
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 139/277 (50%), Gaps = 16/277 (5%)
Query: 233 GTFGRVYRGT---YTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLS-HKNILTV 288
G FG+V T +ED V + V VK + A A + L+ E M L H+NI+ +
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLK-VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 289 LGVSIEDHTSPFL-IYPYQDYTNLKRFLQKCKLCPE-----GVAH-TLTTQEVVDMCLQI 341
LG H P L I Y Y +L FL++ E +A+ TL+T++++ Q+
Sbjct: 116 LGACT--HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWL 401
G+ + A RN ++ + +I D LARD+ + + N PVKW+
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 402 AIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNCP 460
A ES+ ++ SDVW++G+LLWE+ +L PY I L +DGY++ QP P
Sbjct: 234 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP 293
Query: 461 DELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTR 497
++S+M CWA+ P RPTF Q+ S LQE AQ R
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQICSFLQE-QAQEDR 329
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 9 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 62
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 114
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + +
Sbjct: 115 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAK 173
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 174 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 233
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 269
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 8 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 61
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 113
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + +
Sbjct: 114 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAK 172
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 173 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 232
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 268
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K ++L ++
Sbjct: 67 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRK-------YSLDLASLILYA 117
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 176
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
CP L+S+M CWA +P RP F +L + L
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 12/275 (4%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R V L + EG FG VY G YT G + V VKT + + + E + M
Sbjct: 21 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 80
Query: 279 GLSHKNILTVLGVSIEDHTSPFL-IYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
L H +I+ ++G+ E+ T + +YPY + L +L++ K ++L +V
Sbjct: 81 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNK-------NSLKVLTLVLY 130
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
LQI + Y A RN +V +++ D L+R + DY+ P
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLP 189
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
+KW++ ES+ + F+TASDVW F V +WE+ + +QP+ ++ ++ L+ G RL +P
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD 249
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFH 492
CP L+++M CW +P RP F +L L + +
Sbjct: 250 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 284
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 60
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 112
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + +
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAK 171
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 231
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K ++L ++
Sbjct: 67 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRK-------YSLDLASLILYA 117
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 176
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
CP L+S+M CWA +P RP F +L + L
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 60
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 112
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + +
Sbjct: 113 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAK 171
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 172 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 231
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 15 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 68
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 120
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + +
Sbjct: 121 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAK 179
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 180 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 239
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 16 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 69
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 121
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + +
Sbjct: 122 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAK 180
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 181 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 240
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 276
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 12/275 (4%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R V L + EG FG VY G YT G + V VKT + + + E + M
Sbjct: 5 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 64
Query: 279 GLSHKNILTVLGVSIEDHTSPFL-IYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
L H +I+ ++G+ E+ T + +YPY + L +L++ K ++L +V
Sbjct: 65 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNK-------NSLKVLTLVLY 114
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
LQI + Y A RN +V +++ D L+R + DY+ P
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLP 173
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
+KW++ ES+ + F+TASDVW F V +WE+ + +QP+ ++ ++ L+ G RL +P
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD 233
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFH 492
CP L+++M CW +P RP F +L L + +
Sbjct: 234 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 268
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 135/275 (49%), Gaps = 12/275 (4%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R V L + EG FG VY G YT G + V VKT + + + E + M
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFL-IYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
L H +I+ ++G+ E+ T + +YPY + L +L++ K ++L +V
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIMELYPYGE---LGHYLERNK-------NSLKVLTLVLY 118
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
LQI + Y A RN +V +++ D L+R + DY+ P
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-KASVTRLP 177
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
+KW++ ES+ + F+TASDVW F V +WE+ + +QP+ ++ ++ L+ G RL +P
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD 237
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFH 492
CP L+++M CW +P RP F +L L + +
Sbjct: 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 135/276 (48%), Gaps = 15/276 (5%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGM 275
E + R ++L G FG V+ G Y +V VK++ ++ L E
Sbjct: 13 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEAN 66
Query: 276 AMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVV 335
M L H+ ++ + V ++ ++I Y + +L FL+ P G+ LT +++
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI--YIITEYMENGSLVDFLK----TPSGIK--LTINKLL 118
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNEN 395
DM QI G+ + N +V D L +I D LAR L + +
Sbjct: 119 DMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDNEXTAREGAK 177
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P+KW A E++ + TF+ SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +
Sbjct: 178 FPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVR 237
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
P NCP+EL+ +M CW PE RPTF L S L++F
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 446
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K +L ++
Sbjct: 447 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKF-------SLDLASLILYA 497
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ + P+
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK-LPI 556
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
CP L+S+M CWA +P RP F +L + L
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 140/281 (49%), Gaps = 22/281 (7%)
Query: 233 GTFGRVYRGT---YTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLS-HKNILTV 288
G FG+V T +ED V + V VK + A A + L+ E M L H+NI+ +
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLK-VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 289 LGVSIEDHTSPFL-IYPYQDYTNLKRFLQKCKLCPEGVAHT----------LTTQEVVDM 337
LG H P L I Y Y +L FL++ + P G+ ++ L++++++
Sbjct: 116 LGACT--HGGPVLVITEYCCYGDLLNFLRRKR--PPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
Q+ G+ + A RN ++ + +I D LARD+ + + N P
Sbjct: 172 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 231
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQP 456
VKW+A ES+ ++ SDVW++G+LLWE+ +L PY I L +DGY++ QP
Sbjct: 232 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 291
Query: 457 VNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTR 497
P ++S+M CWA+ P RPTF Q+ S LQE AQ R
Sbjct: 292 AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE-QAQEDR 331
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 128/270 (47%), Gaps = 10/270 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K +L ++
Sbjct: 67 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKF-------SLDLASLILYA 117
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ P+
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYY-KASKGKLPI 176
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
CP L+S+M CWA +P RP F +L + L
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/277 (33%), Positives = 138/277 (49%), Gaps = 16/277 (5%)
Query: 233 GTFGRVYRGT---YTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLS-HKNILTV 288
G FG+V T +ED V + V VK + A A + L+ E M L H+NI+ +
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLK-VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 289 LGVSIEDHTSPFL-IYPYQDYTNLKRFLQKCKLCPE-----GVAH-TLTTQEVVDMCLQI 341
LG H P L I Y Y +L FL++ E +A+ T +T++++ Q+
Sbjct: 116 LGACT--HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWL 401
G+ + A RN ++ + +I D LARD+ + + N PVKW+
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 402 AIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNCP 460
A ES+ ++ SDVW++G+LLWE+ +L PY I L +DGY++ QP P
Sbjct: 234 APESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP 293
Query: 461 DELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTR 497
++S+M CWA+ P RPTF Q+ S LQE AQ R
Sbjct: 294 KNIYSIMQACWALEPTHRPTFQQICSFLQE-QAQEDR 329
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 128 bits (322), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ L+H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 88 ISKLNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 145
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 265
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 266 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 293
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 129/270 (47%), Gaps = 10/270 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 446
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K +L ++
Sbjct: 447 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKF-------SLDLASLILYA 497
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S Y+ + P+
Sbjct: 498 YQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK-LPI 556
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 616
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
CP L+S+M CWA +P RP F +L + L
Sbjct: 617 CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 130/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 101
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ L+H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 102 ISKLNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 159
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 279
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 280 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 307
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 7/254 (2%)
Query: 233 GTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
G FG VY G + D +V VKT+ + S L E + + +H+NI+ +G
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
VS++ F++ +LK FL++ + P + +L +++ + I G QY
Sbjct: 101 VSLQSLPR-FILMELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLHVARDIACGCQYLEE 158
Query: 351 XXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
A RNC++ R+ +I D +ARD++ + Y+ G PVKW+ E+ +
Sbjct: 159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 218
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
F++ +D W+FGVLLWE+ +L PY E+ + G R++ P NCP ++ +M
Sbjct: 219 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM 278
Query: 468 AYCWAMNPEGRPTF 481
CW PE RP F
Sbjct: 279 TQCWQHQPEDRPNF 292
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 28 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 87
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ +H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 145
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 265
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 266 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 293
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 7/254 (2%)
Query: 233 GTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
G FG VY G + D +V VKT+ + S L E + + +H+NI+ +G
Sbjct: 41 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 100
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
VS++ F++ +LK FL++ + P + +L +++ + I G QY
Sbjct: 101 VSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLHVARDIACGCQYLEE 158
Query: 351 XXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
A RNC++ R+ +I D +ARD++ + Y+ G PVKW+ E+ +
Sbjct: 159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 218
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
F++ +D W+FGVLLWE+ +L PY E+ + G R++ P NCP ++ +M
Sbjct: 219 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM 278
Query: 468 AYCWAMNPEGRPTF 481
CW PE RP F
Sbjct: 279 TQCWQHQPEDRPNF 292
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 19 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 78
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ +H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 79 ISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 136
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 137 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 256
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 257 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 284
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 7/254 (2%)
Query: 233 GTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
G FG VY G + D +V VKT+ + S L E + + +H+NI+ +G
Sbjct: 68 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 127
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
VS++ F++ +LK FL++ + P + +L +++ + I G QY
Sbjct: 128 VSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLHVARDIACGCQYLEE 185
Query: 351 XXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
A RNC++ R+ +I D +ARD++ + Y+ G PVKW+ E+ +
Sbjct: 186 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 245
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
F++ +D W+FGVLLWE+ +L PY E+ + G R++ P NCP ++ +M
Sbjct: 246 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM 305
Query: 468 AYCWAMNPEGRPTF 481
CW PE RP F
Sbjct: 306 TQCWQHQPEDRPNF 319
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 87 CLTSTVQ--LIMQLMPFGXLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 257
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 258 MIDADSRPKFREL 270
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 7/254 (2%)
Query: 233 GTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
G FG VY G + D +V VKT+ + S L E + + +H+NI+ +G
Sbjct: 48 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 107
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
VS++ F++ +LK FL++ + P + +L +++ + I G QY
Sbjct: 108 VSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLHVARDIACGCQYLEE 165
Query: 351 XXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
A RNC++ R+ +I D +ARD++ + Y+ G PVKW+ E+ +
Sbjct: 166 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 225
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
F++ +D W+FGVLLWE+ +L PY E+ + G R++ P NCP ++ +M
Sbjct: 226 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM 285
Query: 468 AYCWAMNPEGRPTF 481
CW PE RP F
Sbjct: 286 TQCWQHQPEDRPNF 299
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 45 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 104
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ +H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 162
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 163 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 282
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 283 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 310
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 14/274 (5%)
Query: 233 GTFGRVYRGT---YTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLS-HKNILTV 288
G FG+V T +ED V + V VK + A A + L+ E M L H+NI+ +
Sbjct: 49 GAFGKVVEATAFGLGKEDAVLK-VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 107
Query: 289 LGVSIEDHTSPFLIYP----YQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
LG H P L+ Y D N R + L E L ++++ Q+ G
Sbjct: 108 LGACT--HGGPVLVITEYCCYGDLLNFLRRKAEADLDKED-GRPLELRDLLHFSSQVAQG 164
Query: 345 VQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIE 404
+ + A RN ++ + +I D LARD+ + + N PVKW+A E
Sbjct: 165 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 224
Query: 405 SLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNCPDEL 463
S+ ++ SDVW++G+LLWE+ +L PY I L +DGY++ QP P +
Sbjct: 225 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNI 284
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTR 497
+S+M CWA+ P RPTF Q+ S LQE AQ R
Sbjct: 285 YSIMQACWALEPTHRPTFQQICSFLQE-QAQEDR 317
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 101
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ +H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPR-FILMELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 159
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 279
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 280 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 307
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 7/254 (2%)
Query: 233 GTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
G FG VY G + D +V VKT+ + S L E + + +H+NI+ +G
Sbjct: 58 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 117
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
VS++ F++ +LK FL++ + P + +L +++ + I G QY
Sbjct: 118 VSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLHVARDIACGCQYLEE 175
Query: 351 XXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
A RNC++ R+ +I D +ARD++ + Y+ G PVKW+ E+ +
Sbjct: 176 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFM 235
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
F++ +D W+FGVLLWE+ +L PY E+ + G R++ P NCP ++ +M
Sbjct: 236 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM 295
Query: 468 AYCWAMNPEGRPTF 481
CW PE RP F
Sbjct: 296 TQCWQHQPEDRPNF 309
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 127
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ +H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 185
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 186 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 305
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 306 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 333
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 138/277 (49%), Gaps = 24/277 (8%)
Query: 233 GTFGRVYRGTY--TEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGL-SHKNILTVL 289
G FG+V T + GV +V VK + + A + + L+ E M L SH+NI+ +L
Sbjct: 56 GAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLL 115
Query: 290 GVSIEDHTSP-FLIYPYQDYTNLKRFLQ---------------KCKLCPEGVAHTLTTQE 333
G + P +LI+ Y Y +L +L+ + +L E + LT ++
Sbjct: 116 GACT--LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFED 173
Query: 334 VVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDN 393
++ Q+ G+++ A RN +V ++I D LARD+ + + N
Sbjct: 174 LLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGN 233
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE--MAASLQDGY 451
PVKW+A ESL ++ SDVW++G+LLWE+ +L PY I P + +Q+G+
Sbjct: 234 ARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGI-PVDANFYKLIQNGF 292
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
+++QP +E++ +M CWA + RP+FP L S L
Sbjct: 293 KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 86 CLTSTVQ--LITQLMPFGXLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 257 MIDADSRPKFREL 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 14/274 (5%)
Query: 233 GTFGRVYRGT---YTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLS-HKNILTV 288
G FG+V T +ED V + V VK + A A + L+ E M L H+NI+ +
Sbjct: 57 GAFGKVVEATAFGLGKEDAVLK-VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 115
Query: 289 LGVSIEDHTSPFLIYP----YQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
LG H P L+ Y D N R + L E L ++++ Q+ G
Sbjct: 116 LGACT--HGGPVLVITEYCCYGDLLNFLRRKAEADLDKED-GRPLELRDLLHFSSQVAQG 172
Query: 345 VQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIE 404
+ + A RN ++ + +I D LARD+ + + N PVKW+A E
Sbjct: 173 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPE 232
Query: 405 SLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNCPDEL 463
S+ ++ SDVW++G+LLWE+ +L PY I L +DGY++ QP P +
Sbjct: 233 SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNI 292
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTR 497
+S+M CWA+ P RPTF Q+ S LQE AQ R
Sbjct: 293 YSIMQACWALEPTHRPTFQQICSFLQE-QAQEDR 325
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 129/268 (48%), Gaps = 7/268 (2%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ R + L G FG VY G + D +V VKT+ + S L E +
Sbjct: 42 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALI 101
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
+ +H+NI+ +GVS++ F++ +LK FL++ + P + +L +++
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLH 159
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDN 393
+ I G QY A RNC++ R+ +I D +ARD++ + Y+ G
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRL 453
PVKW+ E+ + F++ +D W+FGVLLWE+ +L PY E+ + G R+
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRM 279
Query: 454 NQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+ P NCP ++ +M CW PE RP F
Sbjct: 280 DPPKNCPGPVYRIMTQCWQHQPEDRPNF 307
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 10/267 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAM 277
++ + V G FG VY+G + E + V+ V +K + + S +L E M
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
+ + ++ +LG+ + LI + L ++++ K + +Q +++
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNW 129
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
C+QI G+ Y A RN +V ++ITD LA+ L + + P
Sbjct: 130 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
+KW+A+ES++H+ ++ SDVW++GV +WEL T +PY I E+++ L+ G RL QP
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQL 484
C +++ +M CW ++ + RP F +L
Sbjct: 250 ICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 27 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 86
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 87 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 138 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 197
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 198 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 257
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 258 MIDADSRPKFREL 270
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 86 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 257 MIDADSRPKFREL 269
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 15/287 (5%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQ 272
L E ++R +V L S G FG VY+G + E + V+ V +K + + +
Sbjct: 35 LKETELKRVKV-LGS----GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD 89
Query: 273 EGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQ 332
E + M + H +++ +LGV + L+ + L ++ + K + +Q
Sbjct: 90 EALIMASMDHPHLVRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHK-------DNIGSQ 140
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
+++ C+QI G+ Y A RN +V ++ITD LAR L + D
Sbjct: 141 LLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 200
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
P+KW+A+E + ++ F+ SDVW++GV +WEL T +PY I E+ L+ G R
Sbjct: 201 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER 260
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
L QP C +++ VM CW ++ + RP F +L + RY+
Sbjct: 261 LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYL 307
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 89
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 90 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 260
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 261 MIDADSRPKFREL 273
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 89 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 259
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 260 MIDADSRPKFREL 272
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 88 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 258
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 259 MIDADSRPKFREL 271
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 10/267 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAM 277
++ + V G FG VY+G + E + V+ V +K + + S +L E M
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 78
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
+ + ++ +LG+ + LI + L ++++ K + +Q +++
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNW 129
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
C+QI G+ Y A RN +V ++ITD LA+ L + + P
Sbjct: 130 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
+KW+A+ES++H+ ++ SDVW++GV +WEL T +PY I E+++ L+ G RL QP
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 249
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQL 484
C +++ +M CW ++ + RP F +L
Sbjct: 250 ICTIDVYMIMVKCWMIDADSRPKFREL 276
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 32 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 91
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 92 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 143 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 202
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 203 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 262
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 263 MIDADSRPKFREL 275
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 10/267 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAM 277
++ + V G FG VY+G + E + V+ V +K + + S +L E M
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 71
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
+ + ++ +LG+ + LI + L ++++ K + +Q +++
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNW 122
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
C+QI G+ Y A RN +V ++ITD LA+ L + + P
Sbjct: 123 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
+KW+A+ES++H+ ++ SDVW++GV +WEL T +PY I E+++ L+ G RL QP
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 242
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQL 484
C +++ +M CW ++ + RP F +L
Sbjct: 243 ICTIDVYMIMVKCWMIDADSRPKFREL 269
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 93 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 263
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 264 MIDADSRPKFREL 276
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 88 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 258
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 259 MIDADSRPKFREL 271
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 20 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 79
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 80 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 131 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 190
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 191 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 250
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 251 MIDADSRPKFREL 263
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 86 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 257 MIDADSRPKFREL 269
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 10/270 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
IQR R+ L EG FG V++G Y + V +KT + S LQE + M
Sbjct: 7 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 66
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H +I+ ++GV E+ ++I L+ FLQ K +L ++
Sbjct: 67 QFDHPHIVKLIGVITENPV--WIIMELCTLGELRSFLQVRKF-------SLDLASLILYA 117
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ + Y A RN +V +++ D L+R + S P+
Sbjct: 118 YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXX-KASKGKLPI 176
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A ES+ + F++ASDVW FGV +WE+ +P+ + ++ +++G RL P N
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPN 236
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
CP L+S+M CWA +P RP F +L + L
Sbjct: 237 CPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 86 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 256
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 257 MIDADSRPKFREL 269
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 89 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 259
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 260 MIDADSRPKFREL 272
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 89 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 259
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 260 MIDADSRPKFREL 272
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 136/286 (47%), Gaps = 25/286 (8%)
Query: 233 GTFGRVYRGT---YTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLS-HKNILTV 288
G FG+V T +ED V + V VK + A A + L+ E M L H+NI+ +
Sbjct: 42 GAFGKVVEATAFGLGKEDAVLK-VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNL 100
Query: 289 LGVSIEDHTSPFL-IYPYQDYTNLKRFLQKCKLC-----------PEGV----AHTLTTQ 332
LG H P L I Y Y +L FL++ PEG+ L +
Sbjct: 101 LGACT--HGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
+++ Q+ G+ + A RN ++ + +I D LARD+ + +
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 218
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGY 451
N PVKW+A ES+ ++ SDVW++G+LLWE+ +L PY I L +DGY
Sbjct: 219 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY 278
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTR 497
++ QP P ++S+M CWA+ P RPTF Q+ S LQE AQ R
Sbjct: 279 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE-QAQEDR 323
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 23 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 82
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 83 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAEGMNYLEDR 133
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 134 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 193
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 194 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 253
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 254 MIDADSRPKFREL 266
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 36 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 95
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 96 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 147 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 206
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 207 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 266
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 267 MIDADSRPKFREL 279
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 132/267 (49%), Gaps = 10/267 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAM 277
++ + V G FG VY+G + E + V+ V +K + + S +L E M
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVM 96
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
+ + ++ +LG+ + LI + L ++++ K + +Q +++
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNW 147
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
C+QI G+ Y A RN +V ++ITD LA+ L + + P
Sbjct: 148 CVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
+KW+A+ES++H+ ++ SDVW++GV +WEL T +PY I E+++ L+ G RL QP
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP 267
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQL 484
C +++ +M CW ++ + RP F +L
Sbjct: 268 ICTIDVYMIMVKCWMIDADSRPKFREL 294
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 29 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 88
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 89 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 140 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 199
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 200 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 259
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 260 MIDADSRPKFREL 272
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 15/287 (5%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQ 272
L E ++R +V L S G FG VY+G + E + V+ V +K + + +
Sbjct: 12 LKETELKRVKV-LGS----GAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMD 66
Query: 273 EGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQ 332
E + M + H +++ +LGV + L+ + L ++ + K + +Q
Sbjct: 67 EALIMASMDHPHLVRLLGVCLSPTIQ--LVTQLMPHGCLLEYVHEHK-------DNIGSQ 117
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
+++ C+QI G+ Y A RN +V ++ITD LAR L + D
Sbjct: 118 LLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNAD 177
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
P+KW+A+E + ++ F+ SDVW++GV +WEL T +PY I E+ L+ G R
Sbjct: 178 GGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGER 237
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
L QP C +++ VM CW ++ + RP F +L + RY+
Sbjct: 238 LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRYL 284
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 125/254 (49%), Gaps = 7/254 (2%)
Query: 233 GTFGRVYRGTYT--EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
G FG VY G + D +V VKT+ + S L E + + +H+NI+ +G
Sbjct: 42 GAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIG 101
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
VS++ F++ +LK FL++ + P + +L +++ + I G QY
Sbjct: 102 VSLQSLPR-FILLELMAGGDLKSFLRETRPRPSQPS-SLAMLDLLHVARDIACGCQYLEE 159
Query: 351 XXXXXXXXATRNCVV--DDKLRI-QITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
A RNC++ R+ +I D +A+D++ + Y+ G PVKW+ E+ +
Sbjct: 160 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFM 219
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
F++ +D W+FGVLLWE+ +L PY E+ + G R++ P NCP ++ +M
Sbjct: 220 EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVYRIM 279
Query: 468 AYCWAMNPEGRPTF 481
CW PE RP F
Sbjct: 280 TQCWQHQPEDRPNF 293
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 127/259 (49%), Gaps = 15/259 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G G V+ G Y +V VK++ ++ L E M L H+ ++ + V
Sbjct: 24 GQAGEVWMGYYNGHT----KVAVKSL--KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
++ ++I Y + +L FL+ P G+ LT +++DM QI G+ +
Sbjct: 78 TQEPI--YIITEYMENGSLVDFLK----TPSGI--KLTINKLLDMAAQIAEGMAFIEERN 129
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
N +V D L +I D LAR L + P+KW A E++ + TF+
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINYGTFT 188
Query: 413 TASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWA 472
SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +P NCP+EL+ +M CW
Sbjct: 189 IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWK 248
Query: 473 MNPEGRPTFPQLHSCLQEF 491
PE RPTF L S L++F
Sbjct: 249 ERPEDRPTFDYLRSVLEDF 267
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 30 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 89
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 90 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD A+ L + + P+KW+A+ES++H+ +
Sbjct: 141 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 200
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 201 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 260
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 261 MIDADSRPKFREL 273
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 88 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD A+ L + + P+KW+A+ES++H+ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 258
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 259 MIDADSRPKFREL 271
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V + + + S +L E M + + ++ +LG+
Sbjct: 60 GAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 119
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 120 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD LA+ L + + P+KW+A+ES++H+ +
Sbjct: 171 RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 230
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 231 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 290
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 291 MIDADSRPKFREL 303
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 26 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 85
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 86 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD A+ L + + P+KW+A+ES++H+ +
Sbjct: 137 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 196
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 256
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 257 MIDADSRPKFREL 269
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 33 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 92
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 93 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD A+ L + + P+KW+A+ES++H+ +
Sbjct: 144 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 203
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 204 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMVKCW 263
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 264 MIDADSRPKFREL 276
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 88 CLTSTVQ--LIMQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD A+ L + + P+KW+A+ES++H+ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 258
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 259 MIDADSRPKFREL 271
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 10/253 (3%)
Query: 233 GTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G FG VY+G + E + V+ V +K + + S +L E M + + ++ +LG+
Sbjct: 28 GAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGI 87
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ LI + L ++++ K + +Q +++ C+QI G+ Y
Sbjct: 88 CLTSTVQ--LITQLMPFGCLLDYVREHK-------DNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RN +V ++ITD A+ L + + P+KW+A+ES++H+ +
Sbjct: 139 RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIY 198
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
+ SDVW++GV +WEL T +PY I E+++ L+ G RL QP C +++ +M CW
Sbjct: 199 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIMRKCW 258
Query: 472 AMNPEGRPTFPQL 484
++ + RP F +L
Sbjct: 259 MIDADSRPKFREL 271
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 128/260 (49%), Gaps = 15/260 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ TY + +V VKT+ + +V+ L E M L H ++ + V
Sbjct: 199 GQFGEVWMATYNKHT----KVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVV 252
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
++ ++I + +L FL+ EG L +++D QI G+ +
Sbjct: 253 TKEPI--YIITEFMAKGSLLDFLK----SDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN 304
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
N +V L +I D LAR + ++Y + P+KW A E++ +F+
Sbjct: 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFT 363
Query: 413 TASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWA 472
SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +P NCP+EL+++M CW
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWK 423
Query: 473 MNPEGRPTFPQLHSCLQEFH 492
PE RPTF + S L +F+
Sbjct: 424 NRPEERPTFEYIQSVLDDFY 443
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 127/260 (48%), Gaps = 15/260 (5%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ TY + +V VKT+ + +V+ L E M L H ++ + V
Sbjct: 26 GQFGEVWMATYNKHT----KVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVV 79
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
++ ++I + +L FL+ EG L +++D QI G+ +
Sbjct: 80 TKEPI--YIITEFMAKGSLLDFLK----SDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN 131
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
N +V L +I D LAR + ++Y + P+KW A E++ +F+
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR-EGAKFPIKWTAPEAINFGSFT 190
Query: 413 TASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWA 472
SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +P NCP+EL+++M CW
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWK 250
Query: 473 MNPEGRPTFPQLHSCLQEFH 492
PE RPTF + S L +F
Sbjct: 251 NRPEERPTFEYIQSVLDDFE 270
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D + +HE EL + + V G FG V G E V +KT+
Sbjct: 28 FEDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLC 321
+ Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA- 142
Query: 322 PEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR- 380
T ++V M I G++Y A RN +++ L +++D LAR
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARV 196
Query: 381 --DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEI 438
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 197 LEDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 439 DPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 127/266 (47%), Gaps = 19/266 (7%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHK 283
++L +G FG V G Y +V VK + ++A+A L E M L H
Sbjct: 195 LKLLQTIGKGEFGDVMLGDYRGN-----KVAVKCIKNDATA---QAFLAEASVMTQLRHS 246
Query: 284 NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIM 343
N++ +LGV +E+ +++ Y +L +L+ G + L ++ L +
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS-----RGRS-VLGGDCLLKFSLDVCE 300
Query: 344 GVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAI 403
++Y A RN +V + +++D L ++ + D PVKW A
Sbjct: 301 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP 355
Query: 404 ESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDEL 463
E+L K FST SDVW+FG+LLWE+ + + PY I ++ ++ GY+++ P CP +
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAV 415
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ VM CW ++ RPTF QL L+
Sbjct: 416 YDVMKNCWHLDAATRPTFLQLREQLE 441
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D + +HE EL + + V G FG V G E V +KT+
Sbjct: 28 FEDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLC 321
+ Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA- 142
Query: 322 PEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 381 --DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEI 438
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 197 LEDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 439 DPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R ++L G FG V+ GT+ +V +KT+ + + L+E M
Sbjct: 6 IPRESLQLIKRLGNGQFGEVWMGTWNGNT----KVAIKTLKPGTMSPES--FLEEAQIMK 59
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H ++ + V E+ +++ Y + +L FL+ +G L +VDM
Sbjct: 60 KLKHDKLVQLYAVVSEEPI--YIVTEYMNKGSLLDFLK------DGEGRALKLPNLVDMA 111
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
Q+ G+ Y + N +V + L +I D LAR L + P+
Sbjct: 112 AQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR-LIEDNEXTARQGAKFPI 170
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL EL T + PY ++ E+ ++ GYR+ P +
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQD 230
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP L +M +CW +PE RPTF L S L+++
Sbjct: 231 CPISLHELMIHCWKKDPEERPTFEYLQSFLEDY 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D + +HE EL + + V G FG V G E V +KT+
Sbjct: 28 FEDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLC 321
+ Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA- 142
Query: 322 PEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 381 --DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEI 438
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 197 LEDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 439 DPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 69 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y A N +V + L ++ D LAR L + + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D + +HE EL + + V G FG V G E V +KT+
Sbjct: 28 FEDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLC 321
+ Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA- 142
Query: 322 PEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR- 380
T ++V M I G++Y A RN +++ L +++D L R
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV 196
Query: 381 --DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEI 438
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 197 LEDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 439 DPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 17/293 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D + +HE EL + + V G FG V G E V +KT+
Sbjct: 28 FEDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLC 321
+ Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA- 142
Query: 322 PEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 381 --DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEI 438
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 197 LEDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 439 DPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 127/274 (46%), Gaps = 14/274 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R ++L G FG V+ G Y +V VKT+ +VQ L+E M
Sbjct: 10 IPRESIKLVKRLGAGQFGEVWMGYYNNST----KVAVKTLKPGTMSVQA--FLEEANLMK 63
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H ++ + V + ++I Y +L FL+ EG L +++D
Sbjct: 64 TLQHDKLVRLYAVVTREEPI-YIITEYMAKGSLLDFLK----SDEGGKVLLP--KLIDFS 116
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L +I D LAR + ++Y + P+
Sbjct: 117 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-EGAKFPI 175
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E++ F+ SDVW+FG+LL+E+ T + PY ++ +L GYR+ + N
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRMPRVEN 235
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFH 492
CPDEL+ +M CW E RPTF L S L +F+
Sbjct: 236 CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFY 269
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 17/292 (5%)
Query: 204 DDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS 263
+D + +HE EL + + V G FG V G E V +KT+ +
Sbjct: 27 EDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 264 AVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLCP 322
Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA-- 140
Query: 323 EGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR-- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 141 -----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 195
Query: 381 -DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 196 EDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 253
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 254 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 17/292 (5%)
Query: 204 DDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS 263
+D + +HE EL + + V G FG V G E V +KT+ +
Sbjct: 29 EDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 264 AVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLCP 322
Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 323 EGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR-- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 143 -----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 381 -DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 198 EDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHK 283
++L +G FG V G Y +V VK + ++A+A L E M L H
Sbjct: 8 LKLLQTIGKGEFGDVMLGDYRGN-----KVAVKCIKNDATA---QAFLAEASVMTQLRHS 59
Query: 284 NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIM 343
N++ +LGV +E+ +++ Y +L +L+ L ++ L +
Sbjct: 60 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG------RSVLGGDCLLKFSLDVCE 113
Query: 344 GVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAI 403
++Y A RN +V + +++D L ++ + D PVKW A
Sbjct: 114 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP 168
Query: 404 ESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDEL 463
E+L K FST SDVW+FG+LLWE+ + + PY I ++ ++ GY+++ P CP +
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAV 228
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ VM CW ++ RP+F QL L+
Sbjct: 229 YEVMKNCWHLDAAMRPSFLQLREQLE 254
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 138/292 (47%), Gaps = 17/292 (5%)
Query: 204 DDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS 263
+D + +HE EL + + V G FG V G E V +KT+ +
Sbjct: 29 EDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 264 AVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLCP 322
Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEYMENGSLDSFLRKHDA-- 142
Query: 323 EGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR-- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 143 -----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 381 -DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 198 EDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHK 283
++L +G FG V G Y +V VK + ++A+A L E M L H
Sbjct: 23 LKLLQTIGKGEFGDVMLGDYRGN-----KVAVKCIKNDATA---QAFLAEASVMTQLRHS 74
Query: 284 NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIM 343
N++ +LGV +E+ +++ Y +L +L+ L ++ L +
Sbjct: 75 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG------RSVLGGDCLLKFSLDVCE 128
Query: 344 GVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAI 403
++Y A RN +V + +++D L ++ + D PVKW A
Sbjct: 129 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP 183
Query: 404 ESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDEL 463
E+L K FST SDVW+FG+LLWE+ + + PY I ++ ++ GY+++ P CP +
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAV 243
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ VM CW ++ RP+F QL L+
Sbjct: 244 YEVMKNCWHLDAAMRPSFLQLREQLE 269
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 11/257 (4%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G ++ + V VK+ + + LQE + SH NI+ ++GV
Sbjct: 125 GNFGEVFSGRLRADNTL---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ IY + FL L EG L + ++ M G++Y
Sbjct: 182 TQKQP----IYIVMELVQGGDFL--TFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
A RNC+V +K ++I+D ++R+ Y G PVKW A E+L + +S
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 413 TASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWA 472
+ SDVW+FG+LLWE +L PY + + ++ G RL P CPD +F +M CWA
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWA 353
Query: 473 MNPEGRPTFPQLHSCLQ 489
P RP+F ++ LQ
Sbjct: 354 YEPGQRPSFSTIYQELQ 370
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL--LLQEGMAMYGLS 281
+RL +G+FG V RG + G V VK + + + ++ ++E AM+ L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 282 HKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI 341
H+N++ + GV L P + T L + H L + +Q+
Sbjct: 70 HRNLIRLYGV--------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-LSRYAVQV 120
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH-CLGDNENRPVKW 400
G+ Y A RN ++ + ++I D L R L +D H + ++ P W
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 180
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNC 459
A ESL +TFS ASD W FGV LWE+ T Q+P+ ++ ++ + ++G RL +P +C
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
P ++++VM CWA PE RPTF L L E
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL--LLQEGMAMYGLS 281
+RL +G+FG V RG + G V VK + + + ++ ++E AM+ L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 282 HKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI 341
H+N++ + GV L P + T L + H L + +Q+
Sbjct: 70 HRNLIRLYGV--------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-LSRYAVQV 120
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH-CLGDNENRPVKW 400
G+ Y A RN ++ + ++I D L R L +D H + ++ P W
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNC 459
A ESL +TFS ASD W FGV LWE+ T Q+P+ ++ ++ + ++G RL +P +C
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
P ++++VM CWA PE RPTF L L E
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 135/292 (46%), Gaps = 17/292 (5%)
Query: 205 DRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASA 264
D N+ + E E+ + V++ V G FG V RG E V +KT+ +
Sbjct: 1 DPNEAVREFAKEIDV--SYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTE 58
Query: 265 VQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEG 324
Q L E M H NI+ + GV + + ++ + + L FL+
Sbjct: 59 RQRREFLSEASIMGQFEHPNIIRLEGV-VTNSMPVMILTEFMENGALDSFLRLND----- 112
Query: 325 VAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLF- 383
T ++V M I G++Y A RN +V+ L +++D L+R L
Sbjct: 113 --GQFTVIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
Query: 384 ----PSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
P++ LG P++W A E++ + F++ASD W++G+++WE+ + ++PY ++
Sbjct: 171 NSSDPTETSSLGGK--IPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMS 228
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ +++ YRL P +CP L +M CW + RP FPQ+ S L +
Sbjct: 229 NQDVINAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL--LLQEGMAMYGLS 281
+RL +G+FG V RG + G V VK + + + ++ ++E AM+ L
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 282 HKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI 341
H+N++ + GV L P + T L + H L + +Q+
Sbjct: 74 HRNLIRLYGV--------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-LSRYAVQV 124
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH-CLGDNENRPVKW 400
G+ Y A RN ++ + ++I D L R L +D H + ++ P W
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNC 459
A ESL +TFS ASD W FGV LWE+ T Q+P+ ++ ++ + ++G RL +P +C
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
P ++++VM CWA PE RPTF L L E
Sbjct: 245 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 275
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL--LLQEGMAMYGLS 281
+RL +G+FG V RG + G V VK + + + ++ ++E AM+ L
Sbjct: 14 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 73
Query: 282 HKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI 341
H+N++ + GV L P + T L + H L + +Q+
Sbjct: 74 HRNLIRLYGV--------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-LSRYAVQV 124
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH-CLGDNENRPVKW 400
G+ Y A RN ++ + ++I D L R L +D H + ++ P W
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 184
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNC 459
A ESL +TFS ASD W FGV LWE+ T Q+P+ ++ ++ + ++G RL +P +C
Sbjct: 185 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
P ++++VM CWA PE RPTF L L E
Sbjct: 245 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 275
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL--LLQEGMAMYGLS 281
+RL +G+FG V RG + G V VK + + + ++ ++E AM+ L
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 282 HKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI 341
H+N++ + GV L P + T L + H L + +Q+
Sbjct: 80 HRNLIRLYGV--------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-LSRYAVQV 130
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH-CLGDNENRPVKW 400
G+ Y A RN ++ + ++I D L R L +D H + ++ P W
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAW 190
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNC 459
A ESL +TFS ASD W FGV LWE+ T Q+P+ ++ ++ + ++G RL +P +C
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
P ++++VM CWA PE RPTF L L E
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 281
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL--LLQEGMAMYGLS 281
+RL +G+FG V RG + G V VK + + + ++ ++E AM+ L
Sbjct: 10 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 69
Query: 282 HKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI 341
H+N++ + GV L P + T L + H L + +Q+
Sbjct: 70 HRNLIRLYGV--------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-LSRYAVQV 120
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH-CLGDNENRPVKW 400
G+ Y A RN ++ + ++I D L R L +D H + ++ P W
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 180
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNC 459
A ESL +TFS ASD W FGV LWE+ T Q+P+ ++ ++ + ++G RL +P +C
Sbjct: 181 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
P ++++VM CWA PE RPTF L L E
Sbjct: 241 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 271
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 4 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 57
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 58 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 109
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 110 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 168
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 228
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 261
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 23/258 (8%)
Query: 233 GTFGRV----YRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTV 288
G FG V +RG Y +V +K + + + + ++E M LSH+ ++ +
Sbjct: 20 GQFGVVKYGKWRGQY--------DVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 289 LGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
GV + F+I Y L +L++ + H TQ++++MC + ++Y
Sbjct: 70 YGVCTK-QRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 121
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
A RNC+V+D+ ++++D L+R + +Y PV+W E L++
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SRGSKFPVRWSPPEVLMY 180
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SD+WAFGVL+WE+ +L + PY E A + G RL +P ++++++M
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 240
Query: 469 YCWAMNPEGRPTFPQLHS 486
CW + RPTF L S
Sbjct: 241 SCWHEKADERPTFKILLS 258
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 129/271 (47%), Gaps = 13/271 (4%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL--LLQEGMAMYGLS 281
+RL +G+FG V RG + G V VK + + + ++ ++E AM+ L
Sbjct: 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD 79
Query: 282 HKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI 341
H+N++ + GV L P + T L + H L + +Q+
Sbjct: 80 HRNLIRLYGV--------VLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGT-LSRYAVQV 130
Query: 342 IMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH-CLGDNENRPVKW 400
G+ Y A RN ++ + ++I D L R L +D H + ++ P W
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 190
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPVNC 459
A ESL +TFS ASD W FGV LWE+ T Q+P+ ++ ++ + ++G RL +P +C
Sbjct: 191 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
P ++++VM CWA PE RPTF L L E
Sbjct: 251 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLE 281
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 10/281 (3%)
Query: 220 QRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
+ +R V G FG V++G + E + ++ V +K + D + + +A+
Sbjct: 11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 70
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H +I+ +LG+ +S L+ Y +L +++ + L Q +++
Sbjct: 71 SLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHR-------GALGPQLLLNWG 121
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
+QI G+ Y A RN ++ ++Q+ D +A L P D L P+
Sbjct: 122 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 181
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A+ES+ ++ SDVW++GV +WEL T +PYA + E+ L+ G RL QP
Sbjct: 182 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI 241
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
C +++ VM CW ++ RPTF +L + RY+
Sbjct: 242 CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYL 282
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 132/281 (46%), Gaps = 10/281 (3%)
Query: 220 QRCRVRLFSVNMEGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
+ +R V G FG V++G + E + ++ V +K + D + + +A+
Sbjct: 29 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 88
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H +I+ +LG+ +S L+ Y +L +++ + L Q +++
Sbjct: 89 SLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHR-------GALGPQLLLNWG 139
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
+QI G+ Y A RN ++ ++Q+ D +A L P D L P+
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPI 199
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW+A+ES+ ++ SDVW++GV +WEL T +PYA + E+ L+ G RL QP
Sbjct: 200 KWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQI 259
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
C +++ VM CW ++ RPTF +L + RY+
Sbjct: 260 CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPRYL 300
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 14/274 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R ++L G FG V+ G Y +V VKT+ +VQ L+E M
Sbjct: 9 IPRESIKLVKKLGAGQFGEVWMGYYNNST----KVAVKTLKPGTMSVQA--FLEEANLMK 62
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H ++ + V ++ ++I + +L FL+ EG L +++D
Sbjct: 63 TLQHDKLVRLYAVVTKEEPI-YIITEFMAKGSLLDFLK----SDEGGKVLLP--KLIDFS 115
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L +I D LAR + ++Y + P+
Sbjct: 116 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR-EGAKFPI 174
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E++ F+ S+VW+FG+LL+E+ T + PY ++ ++L GYR+ + N
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMEN 234
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFH 492
CPDEL+ +M CW E RPTF L S L +F+
Sbjct: 235 CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFY 268
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 69 KLRHEKLVQLYAVVSEEPI--YIVIEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 6 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 59
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 60 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 111
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 112 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 170
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 230
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 263
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 210 LHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL 269
+HE EL + + V G FG V G E V +KT+ + Q
Sbjct: 6 VHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 270 LLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL 329
L E M H NI+ + GV + ++ Y + +L FL+K
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD-------AQF 115
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR---DLFPSD 386
T ++V M I G++Y A RN +++ L +++D L+R D +
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAAS 446
Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+ ++ +
Sbjct: 176 YTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 234 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 15/285 (5%)
Query: 210 LHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL 269
+HE EL + + V G FG V G E V +KT+ + Q
Sbjct: 23 VHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 80
Query: 270 LLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL 329
L E M H NI+ + GV + ++ Y + +L FL+K
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEYMENGSLDSFLRKHD-------AQF 132
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR---DLFPSD 386
T ++V M I G++Y A RN +++ L +++D L+R D +
Sbjct: 133 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 192
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAAS 446
Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+ ++ +
Sbjct: 193 YTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 250
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 251 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 69 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 264 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 317
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ L ++VDM
Sbjct: 318 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------ETGKYLRLPQLVDMA 369
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 370 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 428
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 488
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 23/258 (8%)
Query: 233 GTFGRV----YRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTV 288
G FG V +RG Y +V +K + + + + ++E M LSH+ ++ +
Sbjct: 15 GQFGVVKYGKWRGQY--------DVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 289 LGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
GV + F+I Y L +L++ + H TQ++++MC + ++Y
Sbjct: 65 YGVCTK-QRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 116
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
A RNC+V+D+ ++++D L+R + +Y PV+W E L++
Sbjct: 117 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 175
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SD+WAFGVL+WE+ +L + PY E A + G RL +P ++++++M
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 235
Query: 469 YCWAMNPEGRPTFPQLHS 486
CW + RPTF L S
Sbjct: 236 SCWHEKADERPTFKILLS 253
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 124/266 (46%), Gaps = 19/266 (7%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHK 283
++L +G FG V G Y +V VK + ++A+A L E M L H
Sbjct: 14 LKLLQTIGKGEFGDVMLGDYRGN-----KVAVKCIKNDATA---QAFLAEASVMTQLRHS 65
Query: 284 NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIM 343
N++ +LGV +E+ +++ Y +L +L+ L ++ L +
Sbjct: 66 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG------RSVLGGDCLLKFSLDVCE 119
Query: 344 GVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAI 403
++Y A RN +V + +++D L ++ + D PVKW A
Sbjct: 120 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----DTGKLPVKWTAP 174
Query: 404 ESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDEL 463
E+L FST SDVW+FG+LLWE+ + + PY I ++ ++ GY+++ P CP +
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAV 234
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ VM CW ++ RP+F QL L+
Sbjct: 235 YEVMKNCWHLDAAMRPSFLQLREQLE 260
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 234
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ L ++VDM
Sbjct: 235 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------ETGKYLRLPQLVDMA 286
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 345
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 69 KLRHEKLVQLYAVVSEEPI--YIVCEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 23/258 (8%)
Query: 233 GTFGRV----YRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTV 288
G FG V +RG Y +V +K + + + + ++E M LSH+ ++ +
Sbjct: 19 GQFGVVKYGKWRGQY--------DVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 289 LGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
GV + F+I Y L +L++ + H TQ++++MC + ++Y
Sbjct: 69 YGVCTK-QRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 120
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
A RNC+V+D+ ++++D L+R + +Y PV+W E L++
Sbjct: 121 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 179
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SD+WAFGVL+WE+ +L + PY E A + G RL +P ++++++M
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 239
Query: 469 YCWAMNPEGRPTFPQLHS 486
CW + RPTF L S
Sbjct: 240 SCWHEKADERPTFKILLS 257
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 234
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ L ++VDM
Sbjct: 235 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------ETGKYLRLPQLVDMA 286
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 345
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 23/258 (8%)
Query: 233 GTFGRV----YRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTV 288
G FG V +RG Y +V +K + + + + ++E M LSH+ ++ +
Sbjct: 35 GQFGVVKYGKWRGQY--------DVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 289 LGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
GV + F+I Y L +L++ + H TQ++++MC + ++Y
Sbjct: 85 YGVCTK-QRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 136
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
A RNC+V+D+ ++++D L+R + +Y PV+W E L++
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 195
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SD+WAFGVL+WE+ +L + PY E A + G RL +P ++++++M
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 255
Query: 469 YCWAMNPEGRPTFPQLHS 486
CW + RPTF L S
Sbjct: 256 SCWHEKADERPTFKILLS 273
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 65
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y + +L FL+ L ++VDM
Sbjct: 66 KLRHEKLVQLYAVVSEEPI--YIVTEYMNKGSLLDFLKG------ETGKYLRLPQLVDMS 117
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 176
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 236
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 269
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 23/258 (8%)
Query: 233 GTFGRV----YRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTV 288
G FG V +RG Y +V +K + + + + ++E M LSH+ ++ +
Sbjct: 20 GQFGVVKYGKWRGQY--------DVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 289 LGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
GV + F+I Y L +L++ + H TQ++++MC + ++Y
Sbjct: 70 YGVCTK-QRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 121
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
A RNC+V+D+ ++++D L+R + +Y PV+W E L++
Sbjct: 122 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 180
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SD+WAFGVL+WE+ +L + PY E A + G RL +P ++++++M
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 240
Query: 469 YCWAMNPEGRPTFPQLHS 486
CW + RPTF L S
Sbjct: 241 SCWHEKADERPTFKILLS 258
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D + +HE EL + + V G FG V G E V +KT+
Sbjct: 28 FEDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY 85
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLC 321
+ Q L E M H NI+ + GV + + P +I + +L FL+K
Sbjct: 86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDA- 142
Query: 322 PEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 143 ------QFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV 196
Query: 381 --DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEI 438
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 197 LEDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
Query: 439 DPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 255 SNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 126/258 (48%), Gaps = 23/258 (8%)
Query: 233 GTFGRV----YRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTV 288
G FG V +RG Y +V +K + + + + ++E M LSH+ ++ +
Sbjct: 26 GQFGVVKYGKWRGQY--------DVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 289 LGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
GV + F+I Y L +L++ + H TQ++++MC + ++Y
Sbjct: 76 YGVCTK-QRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 127
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
A RNC+V+D+ ++++D L+R + +Y PV+W E L++
Sbjct: 128 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS-SVGSKFPVRWSPPEVLMY 186
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SD+WAFGVL+WE+ +L + PY E A + G RL +P ++++++M
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYTIMY 246
Query: 469 YCWAMNPEGRPTFPQLHS 486
CW + RPTF L S
Sbjct: 247 SCWHEKADERPTFKILLS 264
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 181 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 234
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ L ++VDM
Sbjct: 235 KLRHEKLVQLYAVVSEEPI--YIVGEYMSKGSLLDFLKG------ETGKYLRLPQLVDMA 286
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 287 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 345
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 405
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 406 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 130/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
+ H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 69 KIRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 8 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 61
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ L ++VDM
Sbjct: 62 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------ETGKYLRLPQLVDMA 113
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 114 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 172
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 232
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 265
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 69 KLRHEKLVQLYAVVSEEPI--YIVIEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y L FL+ + L ++VDM
Sbjct: 69 KLRHEKLVQLYAVVSEEPI--YIVMEYMSKGCLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 182 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGNMSPEA--FLQEAQVMK 235
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y +L FL+ + L ++VDM
Sbjct: 236 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGSLLDFLKG------EMGKYLRLPQLVDMA 287
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D L R L + + P+
Sbjct: 288 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGR-LIEDNEYTARQGAKFPI 346
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 406
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 407 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 439
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 137/292 (46%), Gaps = 17/292 (5%)
Query: 204 DDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS 263
+D + +HE EL + + V G FG V G E V +KT+ +
Sbjct: 29 EDPTQTVHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 264 AVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLCP 322
Q L E M H NI+ + GV + + P +I + +L FL+K
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--SKPVMIVTEXMENGSLDSFLRKHDA-- 142
Query: 323 EGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR-- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 143 -----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 197
Query: 381 -DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
D + Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+
Sbjct: 198 EDDPEAAYTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS 255
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 256 NQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 15 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 68
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y L FL+ + L ++VDM
Sbjct: 69 KLRHEKLVQLYAVVSEEPI--YIVTEYMSKGCLLDFLKG------EMGKYLRLPQLVDMA 120
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + + P+
Sbjct: 121 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEYTARQGAKFPI 179
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 239
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW +PE RPTF L + L+++
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 139/292 (47%), Gaps = 17/292 (5%)
Query: 204 DDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS 263
+D N+ +HE E I+ + + V G FG V G E V +KT+ +
Sbjct: 6 EDPNQAVHEFAKE--IEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 264 AVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIY-PYQDYTNLKRFLQKCKLCP 322
Q L E M H NI+ + GV + + P +I Y + +L FL+K
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTK--SKPVMIVTEYMENGSLDTFLKKND--- 118
Query: 323 EGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR-- 380
T ++V M I G++Y A RN +++ L +++D L+R
Sbjct: 119 ----GQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
Query: 381 -DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
D + Y G P++W A E++ + F++ASDVW++G+++WE+ + ++PY E+
Sbjct: 175 EDDPEAAYTTRGGK--IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++++GYRL P++CP L+ +M CW RP F ++ + L +
Sbjct: 233 NQDVIKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 128/273 (46%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 12 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 65
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ +++ Y + +L FL+ L ++VDM
Sbjct: 66 KLRHEKLVQLYAVVSEEPI--YIVTEYMNKGSLLDFLKG------ETGKYLRLPQLVDMS 117
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + P+
Sbjct: 118 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEWTARQGAKFPI 176
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 236
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 269
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 123/260 (47%), Gaps = 25/260 (9%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ TY + +V VKT+ + +V+ L E M L H ++ + V
Sbjct: 193 GQFGEVWMATYNKHT----KVAVKTMKPGSMSVEA--FLAEANVMKTLQHDKLVKLHAVV 246
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
++ ++I + +L FL+ EG L +++D QI G+ +
Sbjct: 247 TKEPI--YIITEFMAKGSLLDFLK----SDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN 298
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
N +V L +I D LAR P+KW A E++ +F+
Sbjct: 299 YIHRDLRAANILVSASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFT 347
Query: 413 TASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWA 472
SDVW+FG+LL E+ T + PY + E+ +L+ GYR+ +P NCP+EL+++M CW
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWK 407
Query: 473 MNPEGRPTFPQLHSCLQEFH 492
PE RPTF + S L +F+
Sbjct: 408 NRPEERPTFEYIQSVLDDFY 427
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 35/264 (13%)
Query: 233 GTFGRV----YRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTV 288
G FG V +RG Y +V +K + + + + ++E M LSH+ ++ +
Sbjct: 35 GQFGVVKYGKWRGQY--------DVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 289 LGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
GV + F+I Y L +L++ + H TQ++++MC + ++Y
Sbjct: 85 YGVCTK-QRPIFIITEYMANGCLLNYLREMR-------HRFQTQQLLEMCKDVCEAMEYL 136
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR------PVKWLA 402
A RNC+V+D+ ++++D L+R + L D E PV+W
Sbjct: 137 ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSR-------YVLDDEETSSVGSKFPVRWSP 189
Query: 403 IESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDE 462
E L++ FS+ SD+WAFGVL+WE+ +L + PY E A + G RL +P ++
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEK 249
Query: 463 LFSVMAYCWAMNPEGRPTFPQLHS 486
++++M CW + RPTF L S
Sbjct: 250 VYTIMYSCWHEKADERPTFKILLS 273
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 11/257 (4%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G ++ + V VK+ + + LQE + SH NI+ ++GV
Sbjct: 125 GNFGEVFSGRLRADNTL---VAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ IY + FL L EG L + ++ M G++Y
Sbjct: 182 TQKQP----IYIVMELVQGGDFL--TFLRTEGA--RLRVKTLLQMVGDAAAGMEYLESKC 233
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
A RNC+V +K ++I+D ++R+ G PVKW A E+L + +S
Sbjct: 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYS 293
Query: 413 TASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWA 472
+ SDVW+FG+LLWE +L PY + + ++ G RL P CPD +F +M CWA
Sbjct: 294 SESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLMEQCWA 353
Query: 473 MNPEGRPTFPQLHSCLQ 489
P RP+F ++ LQ
Sbjct: 354 YEPGQRPSFSTIYQELQ 370
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 132/285 (46%), Gaps = 15/285 (5%)
Query: 210 LHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSL 269
+HE EL + + V G FG V G E V +KT+ + Q
Sbjct: 6 VHEFAKEL--DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 270 LLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTL 329
L E M H NI+ + GV + ++ + +L FL+K
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGV-VTKSKPVMIVTEXMENGSLDSFLRKHD-------AQF 115
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR---DLFPSD 386
T ++V M I G++Y A RN +++ L +++D L+R D +
Sbjct: 116 TVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA 175
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAAS 446
Y G P++W + E++ ++ F++ASDVW++G++LWE+ + ++PY E+ ++ +
Sbjct: 176 YTTRGGK--IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 233
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+ +GYRL P++CP L+ +M CW + RP F Q+ S L +
Sbjct: 234 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 126/273 (46%), Gaps = 15/273 (5%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I R +RL +G FG V+ GT+ +G V +KT+ + + LQE M
Sbjct: 5 IPRESLRLEVKLGQGCFGEVWMGTW---NGTTR-VAIKTLKPGTMSPEA--FLQEAQVMK 58
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
L H+ ++ + V E+ ++ Y +L FL+ L ++VDM
Sbjct: 59 KLRHEKLVQLYAVVSEEPIX--IVTEYMSKGSLLDFLKG------ETGKYLRLPQLVDMA 110
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV 398
QI G+ Y N +V + L ++ D LAR L + P+
Sbjct: 111 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR-LIEDNEXTARQGAKFPI 169
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
KW A E+ ++ F+ SDVW+FG+LL ELTT + PY + E+ ++ GYR+ P
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPE 229
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP+ L +M CW PE RPTF L + L+++
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 262
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 17/253 (6%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G + +D +V +KT+ + A + + ++E M LSH ++ + GV
Sbjct: 18 GQFGLVHLGYWLNKD----KVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYGVC 71
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+E +P L++ + ++ L +L+ + + ++ MCL + G+ Y
Sbjct: 72 LEQ--APICLVFEFMEHGCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + I+++D + R + D + PVKW + E +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW+FGVL+WE+ + + PY E+ + G+RL +P ++ +M +CW
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 241
Query: 472 AMNPEGRPTFPQL 484
PE RP F +L
Sbjct: 242 KERPEDRPAFSRL 254
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G + +D +V +KT+ + A + + ++E M LSH ++ + GV
Sbjct: 16 GQFGLVHLGYWLNKD----KVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYGVC 69
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+E +P L++ + ++ L +L+ + + ++ MCL + G+ Y
Sbjct: 70 LEQ--APICLVFEFMEHGCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + I+++D + R + D + PVKW + E +
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW+FGVL+WE+ + + PY E+ + G+RL +P ++ +M +CW
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 239
Query: 472 AMNPEGRPTFPQLHSCLQE 490
PE RP F +L L E
Sbjct: 240 KERPEDRPAFSRLLRQLAE 258
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 126/273 (46%), Gaps = 15/273 (5%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHK 283
V++ V G FG V RG E V +KT+ + Q L E M H
Sbjct: 16 VKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHP 75
Query: 284 NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIM 343
NI+ + GV + + ++ + + L FL+ T ++V M I
Sbjct: 76 NIIRLEGV-VTNSMPVMILTEFMENGALDSFLRLND-------GQFTVIQLVGMLRGIAS 127
Query: 344 GVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLF-----PSDYHCLGDNENRPV 398
G++Y A RN +V+ L +++D L+R L P+ LG P+
Sbjct: 128 GMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGK--IPI 185
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
+W A E++ + F++ASD W++G+++WE+ + ++PY ++ ++ +++ YRL P +
Sbjct: 186 RWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYRLPPPPD 245
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP L +M CW + RP FPQ+ S L +
Sbjct: 246 CPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G + +D +V +KT+ + A + + ++E M LSH ++ + GV
Sbjct: 18 GQFGLVHLGYWLNKD----KVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYGVC 71
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+E +P L++ + ++ L +L+ + + ++ MCL + G+ Y
Sbjct: 72 LEQ--APICLVFEFMEHGCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + I+++D + R + D + PVKW + E +
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW+FGVL+WE+ + + PY E+ + G+RL +P ++ +M +CW
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 241
Query: 472 AMNPEGRPTFPQLHSCLQE 490
PE RP F +L L E
Sbjct: 242 KERPEDRPAFSRLLRQLAE 260
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 123/271 (45%), Gaps = 9/271 (3%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I+ R+ + + G G V G + V +K + + Q L E M
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H NI+ + GV + ++ Y + +L FL+ T ++V M
Sbjct: 106 QFDHPNIIRLEGVVTRGRLA-MIVTEYMENGSLDTFLRTHD-------GQFTIMQLVGML 157
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS-DYHCLGDNENRP 397
+ G++Y A RN +VD L +++D L+R L D P
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIP 217
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV 457
++W A E++ +TFS+ASDVW+FGV++WE+ ++PY + ++ +S+++GYRL P+
Sbjct: 218 IRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPM 277
Query: 458 NCPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
CP L +M CW + RP F Q+ S L
Sbjct: 278 GCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 13/273 (4%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I+ R+ + + G G V G + V +K + + Q L E M
Sbjct: 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMG 105
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMC 338
H NI+ + GV + ++ Y + +L FL+ T ++V M
Sbjct: 106 QFDHPNIIRLEGVVTRGRLA-MIVTEYMENGSLDTFLRTHD-------GQFTIMQLVGML 157
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR---DLFPSDYHCLGDNEN 395
+ G++Y A RN +VD L +++D L+R D + Y G
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI- 216
Query: 396 RPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
P++W A E++ +TFS+ASDVW+FGV++WE+ ++PY + ++ +S+++GYRL
Sbjct: 217 -PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPA 275
Query: 456 PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCL 488
P+ CP L +M CW + RP F Q+ S L
Sbjct: 276 PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 17/259 (6%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G + +D +V +KT+ + A + + ++E M LSH ++ + GV
Sbjct: 21 GQFGLVHLGYWLNKD----KVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYGVC 74
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+E +P L++ + ++ L +L+ + + ++ MCL + G+ Y
Sbjct: 75 LEQ--APICLVFEFMEHGCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + I+++D + R + D + PVKW + E +
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW+FGVL+WE+ + + PY E+ + G+RL +P ++ +M +CW
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 244
Query: 472 AMNPEGRPTFPQLHSCLQE 490
PE RP F +L L E
Sbjct: 245 RERPEDRPAFSRLLRQLAE 263
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 14/300 (4%)
Query: 198 PSYSRLDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLV 255
P LD+ + L S+ R R++L G FG+V D V V
Sbjct: 40 PDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 99
Query: 256 KTVTDNASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRF 314
K + + A+ + L+ E + + H N++ +LG + +I + + NL +
Sbjct: 100 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 159
Query: 315 LQK-------CKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
L+ K+ PE + LT + ++ Q+ G+++ A RN ++
Sbjct: 160 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 219
Query: 367 DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWE 426
+K ++I D LARD++ + + P+KW+A E++ + ++ SDVW+FGVLLWE
Sbjct: 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 279
Query: 427 LTTLAQQPY--AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ +L PY +ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 280 IFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 338
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 137/300 (45%), Gaps = 14/300 (4%)
Query: 198 PSYSRLDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLV 255
P LD+ + L S+ R R++L G FG+V D V V
Sbjct: 3 PDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 256 KTVTDNASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRF 314
K + + A+ + L+ E + + H N++ +LG + +I + + NL +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 315 LQK-------CKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
L+ K+ PE + LT + ++ Q+ G+++ A RN ++
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 367 DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWE 426
+K ++I D LARD++ + + P+KW+A E++ + ++ SDVW+FGVLLWE
Sbjct: 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 427 LTTLAQQPY--AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ +L PY +ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 243 IFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 126/273 (46%), Gaps = 15/273 (5%)
Query: 217 LTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMA 276
+ ++R + L G FG V G + + +V VK + + + + QE
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQ----YDVAVKMIKEGS--MSEDEFFQEAQT 56
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVD 336
M LSH ++ GV + + IY +Y + L + +G L ++++
Sbjct: 57 MMKLSHPKLVKFYGVC----SKEYPIYIVTEYISNGCLLNYLRSHGKG----LEPSQLLE 108
Query: 337 MCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR 396
MC + G+ + A RNC+VD L ++++D + R + D +
Sbjct: 109 MCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKF 167
Query: 397 PVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQP 456
PVKW A E + +S+ SDVWAFG+L+WE+ +L + PY E+ + G+RL +P
Sbjct: 168 PVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP 227
Query: 457 VNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
D ++ +M CW PE RPTF QL S ++
Sbjct: 228 HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 10/291 (3%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTY--TEEDGVEEEVLVKTVTD 260
LD+ + L S+ R R+ L G FG+V ++ V VK + +
Sbjct: 8 LDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE 67
Query: 261 NASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFL--QK 317
A+ + L+ E + + H N++ +LG + +I + + NL +L ++
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 318 CKLCPEGVAHT--LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITD 375
+ P + LT + ++ Q+ G+++ A RN ++ +K ++I D
Sbjct: 128 NEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXD 187
Query: 376 NALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY 435
LARD++ + + P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY
Sbjct: 188 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
Query: 436 --AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 248 PGVKIDE-EFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 297
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 17/259 (6%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G + +D +V +KT+ + + + ++E M LSH ++ + GV
Sbjct: 38 GQFGLVHLGYWLNKD----KVAIKTIKEGS--MSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+E +P L++ + ++ L +L+ + + ++ MCL + G+ Y
Sbjct: 92 LEQ--APICLVFEFMEHGCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + I+++D + R + D + PVKW + E +
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW+FGVL+WE+ + + PY E+ + G+RL +P ++ +M +CW
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 261
Query: 472 AMNPEGRPTFPQLHSCLQE 490
PE RP F +L L E
Sbjct: 262 KERPEDRPAFSRLLRQLAE 280
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 17/293 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D N+ + E E+ I C V++ V G FG V G E V +KT+
Sbjct: 16 FEDPNEAVREFAKEIDIS-C-VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCP 322
+ Q L E M H N++ + GV + T +I + + +L FL++
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGV-VTKSTPVMIITEFMENGSLDSFLRQND--- 129
Query: 323 EGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL 382
T ++V M I G++Y A RN +V+ L +++D L+R L
Sbjct: 130 ----GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 185
Query: 383 F-----PSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAE 437
P+ LG P++W A E++ ++ F++ASDVW++G+++WE+ + ++PY +
Sbjct: 186 EDDTSDPTYTSALGGK--IPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 243
Query: 438 IDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQE 490
+ ++ +++ YRL P++CP L +M CW + RP F Q+ + L +
Sbjct: 244 MTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 296
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 14/300 (4%)
Query: 198 PSYSRLDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLV 255
P LD+ + L S+ R R++L G FG+V D V V
Sbjct: 3 PDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 256 KTVTDNASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRF 314
K + + A+ + L+ E + + H N++ +LG + +I + + NL +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 315 LQK-------CKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
L+ K+ PE + LT + ++ Q+ G+++ A RN ++
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 367 DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWE 426
+K ++I D LARD++ + P+KW+A E++ + ++ SDVW+FGVLLWE
Sbjct: 183 EKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 427 LTTLAQQPY--AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ +L PY +ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 243 IFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 215 SELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLVKTVTDNASAVQVSLLLQ 272
S+ R R++L G FG+V D V VK + + A+ + L+
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 273 EGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQK-------CKLCPEG 324
E + + H N++ +LG + +I + + NL +L+ K+ PE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 325 VAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLF 383
+ LT + ++ Q+ G+++ A RN ++ +K ++I D LARD++
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 384 PSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPF 441
+ + P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 249
Query: 442 EMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E L++G R+ P E++ M CW P RPTF +L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 14/300 (4%)
Query: 198 PSYSRLDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLV 255
P LD+ + L S+ R R++L G FG+V D V V
Sbjct: 5 PDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 64
Query: 256 KTVTDNASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRF 314
K + + A+ + L+ E + + H N++ +LG + +I + + NL +
Sbjct: 65 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 124
Query: 315 LQK-------CKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
L+ K PE + LT + ++ Q+ G+++ A RN ++
Sbjct: 125 LRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 184
Query: 367 DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWE 426
+K ++I D LARD++ + + P+KW+A E++ + ++ SDVW+FGVLLWE
Sbjct: 185 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 244
Query: 427 LTTLAQQPY--AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ +L PY +ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 245 IFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 303
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 131/283 (46%), Gaps = 14/283 (4%)
Query: 215 SELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLVKTVTDNASAVQVSLLLQ 272
S+ R R++L G FG+V D V VK + + A+ + L+
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 273 EGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQK-------CKLCPEG 324
E + + H N++ +LG + +I + + NL +L+ K+ PE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 325 VAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLF 383
+ LT + ++ Q+ G+++ A RN ++ +K ++I D LARD++
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 384 PSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPF 441
+ + P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 249
Query: 442 EMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E L++G R+ P E++ M CW P RPTF +L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 137/292 (46%), Gaps = 15/292 (5%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNA 262
+D N+ + E E+ C +++ V G FG V G E V +KT+
Sbjct: 12 FEDPNQAVREFAKEIDAS-C-IKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 263 SAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCP 322
+ Q L E M H NI+ + GV + +I Y + +L FL+K
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGV-VTKCKPVMIITEYMENGSLDAFLRKND--- 125
Query: 323 EGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR-- 380
T ++V M I G++Y A RN +V+ L +++D ++R
Sbjct: 126 ----GRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVL 181
Query: 381 -DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID 439
D + Y G P++W A E++ ++ F++ASDVW++G+++WE+ + ++PY ++
Sbjct: 182 EDDPEAAYTTRGGK--IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 239
Query: 440 PFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++++GYRL P++CP L +M CW RP F Q+ + L +
Sbjct: 240 NQDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 123/259 (47%), Gaps = 17/259 (6%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ G + +D +V +KT+ + A + + ++E M LSH ++ + GV
Sbjct: 19 GQFGLVHLGYWLNKD----KVAIKTIREGAMSEED--FIEEAEVMMKLSHPKLVQLYGVC 72
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+E +P L+ + ++ L +L+ + + ++ MCL + G+ Y
Sbjct: 73 LEQ--APICLVTEFMEHGCLSDYLRTQR-------GLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
A RNC+V + I+++D + R + D + PVKW + E +
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW+FGVL+WE+ + + PY E+ + G+RL +P ++ +M +CW
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCW 242
Query: 472 AMNPEGRPTFPQLHSCLQE 490
PE RP F +L L E
Sbjct: 243 RERPEDRPAFSRLLRQLAE 261
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 10/291 (3%)
Query: 203 LDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTY--TEEDGVEEEVLVKTVTD 260
LD+ + L S+ R R+ L G FG+V ++ V VK + +
Sbjct: 8 LDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKE 67
Query: 261 NASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFL--QK 317
A+ + L+ E + + H N++ +LG + +I + + NL +L ++
Sbjct: 68 GATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR 127
Query: 318 CKLCPEGVAHT--LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITD 375
+ P + LT + ++ Q+ G+++ A RN ++ +K ++I D
Sbjct: 128 NEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICD 187
Query: 376 NALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY 435
LARD++ + + P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY
Sbjct: 188 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
Query: 436 --AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 248 PGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 297
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 136/298 (45%), Gaps = 12/298 (4%)
Query: 198 PSYSRLDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTY--TEEDGVEEEVLV 255
P LD+ + L S+ R R++L G FG+V ++ V V
Sbjct: 5 PDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAV 64
Query: 256 KTVTDNASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRF 314
K + + A+ + L+ E + + H N++ +LG + +I + + NL +
Sbjct: 65 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 124
Query: 315 LQKCK-----LCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDK 368
L+ + PE + LT + ++ Q+ G+++ A RN ++ +K
Sbjct: 125 LRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK 184
Query: 369 LRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELT 428
++I D LARD+ + P+KW+A E++ + ++ SDVW+FGVLLWE+
Sbjct: 185 NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 429 TLAQQPY--AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+L PY +ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 245 SLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V G E V +KT+ + Q L E M H NI+ + GV
Sbjct: 19 GEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGV- 77
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ +I Y + +L FL+K T ++V M I G++Y
Sbjct: 78 VTKCKPVMIITEYMENGSLDAFLRKND-------GRFTVIQLVGMLRGIGSGMKYLSDMS 130
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALAR---DLFPSDYHCLGDNENRPVKWLAIESLVHK 409
A RN +V+ L +++D ++R D + Y G P++W A E++ ++
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK--IPIRWTAPEAIAYR 188
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F++ASDVW++G+++WE+ + ++PY ++ ++ ++++GYRL P++CP L +M
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 248
Query: 470 CWAMNPEGRPTFPQLHSCLQEF 491
CW RP F Q+ + L +
Sbjct: 249 CWQKERSDRPKFGQIVNMLDKL 270
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V G E V +KT+ + Q L E M H NI+ + GV
Sbjct: 25 GEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGV- 83
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ +I Y + +L FL+K T ++V M I G++Y
Sbjct: 84 VTKCKPVMIITEYMENGSLDAFLRKND-------GRFTVIQLVGMLRGIGSGMKYLSDMS 136
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALAR---DLFPSDYHCLGDNENRPVKWLAIESLVHK 409
A RN +V+ L +++D ++R D + Y G P++W A E++ ++
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGK--IPIRWTAPEAIAYR 194
Query: 410 TFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY 469
F++ASDVW++G+++WE+ + ++PY ++ ++ ++++GYRL P++CP L +M
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDCPIALHQLMLD 254
Query: 470 CWAMNPEGRPTFPQLHSCLQEF 491
CW RP F Q+ + L +
Sbjct: 255 CWQKERSDRPKFGQIVNMLDKL 276
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 15/273 (5%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHK 283
V++ V G FG V G E V +KT+ + Q L E M H
Sbjct: 9 VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHP 68
Query: 284 NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIM 343
N++ + GV + T +I + + +L FL++ T ++V M I
Sbjct: 69 NVIHLEGV-VTKSTPVMIITEFMENGSLDSFLRQND-------GQFTVIQLVGMLRGIAA 120
Query: 344 GVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLF-----PSDYHCLGDNENRPV 398
G++Y A RN +V+ L +++D L+R L P+ LG P+
Sbjct: 121 GMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK--IPI 178
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
+W A E++ ++ F++ASDVW++G+++WE+ + ++PY ++ ++ +++ YRL P++
Sbjct: 179 RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMD 238
Query: 459 CPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
CP L +M CW + RP F Q+ + L +
Sbjct: 239 CPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 14/300 (4%)
Query: 198 PSYSRLDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLV 255
P LD+ + L S+ R R++L G FG+V D V V
Sbjct: 3 PDELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 62
Query: 256 KTVTDNASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRF 314
K + + A+ + L+ E + + H N++ +LG + +I + + NL +
Sbjct: 63 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122
Query: 315 LQK-------CKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
L+ K+ PE + LT + ++ Q+ G+++ A RN ++
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182
Query: 367 DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWE 426
+K ++I D LARD+ + P+KW+A E++ + ++ SDVW+FGVLLWE
Sbjct: 183 EKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE 242
Query: 427 LTTLAQQPY--AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ +L PY +ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 243 IFSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 11/250 (4%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V +G Y + +V +K + +++E M+ L + I+ ++GV
Sbjct: 347 GNFGSVRQGVYRMRKK-QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 405
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ + L+ L +FL G + V ++ Q+ MG++Y
Sbjct: 406 QAE--ALMLVMEMAGGGPLHKFLV-------GKREEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVHKTF 411
A RN ++ ++ +I+D L++ L D Y+ P+KW A E + + F
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 516
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW++GV +WE + Q+PY ++ E+ A ++ G R+ P CP EL+++M+ CW
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCW 576
Query: 472 AMNPEGRPTF 481
E RP F
Sbjct: 577 IYKWEDRPDF 586
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 11/250 (4%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V +G Y + +V +K + +++E M+ L + I+ ++GV
Sbjct: 21 GNFGSVRQGVYRMRKK-QIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC 79
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
+ + L+ L +FL G + V ++ Q+ MG++Y
Sbjct: 80 QAE--ALMLVMEMAGGGPLHKFLV-------GKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVHKTF 411
A RN ++ ++ +I+D L++ L D Y+ P+KW A E + + F
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKF 190
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCW 471
S+ SDVW++GV +WE + Q+PY ++ E+ A ++ G R+ P CP EL+++M+ CW
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDCW 250
Query: 472 AMNPEGRPTF 481
E RP F
Sbjct: 251 IYKWEDRPDF 260
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 27/281 (9%)
Query: 232 EGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG FG+V Y E D E+V VK++ + ++ L +E + L H+NI+ G
Sbjct: 31 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKG 90
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ ED + LI + +LK +L K K + + ++ + +QI G+ Y
Sbjct: 91 ICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-------NKINLKQQLKYAVQICKGMDYLG 143
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESLVH 408
A RN +V+ + +++I D L + + + + D+ + PV W A E L+
Sbjct: 144 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 203
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF--------------EMAASLQDGYRLN 454
F ASDVW+FGV L EL T + + F + +L++G RL
Sbjct: 204 SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP 263
Query: 455 QPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQL 495
P NCPDE++ +M CW P R +F L ++ F A L
Sbjct: 264 CPPNCPDEVYQLMRKCWEFQPSNRTSFQNL---IEGFEALL 301
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 14/283 (4%)
Query: 215 SELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLVKTVTDNASAVQVSLLLQ 272
S+ R R++L G FG+V D V VK + + A+ + L+
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 273 EGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQK-------CKLCPEG 324
E + + H N++ +LG + +I + + NL +L+ K+ PE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 325 VAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLF 383
+ LT + ++ Q+ G+++ A RN ++ +K ++I D LARD+
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 384 PSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPF 441
+ P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 249
Query: 442 EMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E L++G R+ P E++ M CW P RPTF +L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 24/270 (8%)
Query: 232 EGTFGRVYRGTYTEE-DGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG FG+V Y E D E+V VK++ + ++ L +E + L H+NI+ G
Sbjct: 19 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKG 78
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ ED + LI + +LK +L K K + + ++ + +QI G+ Y
Sbjct: 79 ICTEDGGNGIKLIMEFLPSGSLKEYLPKNK-------NKINLKQQLKYAVQICKGMDYLG 131
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESLVH 408
A RN +V+ + +++I D L + + + + D+ + PV W A E L+
Sbjct: 132 SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQ 191
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF--------------EMAASLQDGYRLN 454
F ASDVW+FGV L EL T + + F + +L++G RL
Sbjct: 192 SKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP 251
Query: 455 QPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
P NCPDE++ +M CW P R +F L
Sbjct: 252 CPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 281
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 15/291 (5%)
Query: 204 DDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNAS 263
+D N+ +H+ EL C +++ V G FG V G + V +KT+ +
Sbjct: 27 EDPNRAVHQFAKELDAS-C-IKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 264 AVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPE 323
Q L E M H N++ + GV + ++ + + L FL+K
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGV-VTRGKPVMIVIEFMENGALDAFLRKHD---- 139
Query: 324 GVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR--- 380
T ++V M I G++Y A RN +V+ L +++D L+R
Sbjct: 140 ---GQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIE 196
Query: 381 DLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDP 440
D + Y G PV+W A E++ ++ F++ASDVW++G+++WE+ + ++PY ++
Sbjct: 197 DDPEAVYTTTGGK--IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
Query: 441 FEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ ++++GYRL P++CP L +M CW RP F Q+ L +
Sbjct: 255 QDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 14/283 (4%)
Query: 215 SELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLVKTVTDNASAVQVSLLLQ 272
S+ R R++L G FG+V D V VK + + A+ + L+
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 273 EGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQK-------CKLCPEG 324
E + + H N++ +LG + +I + + NL +L+ K+ PE
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 325 VAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLF 383
+ LT + ++ Q+ G+++ A RN ++ +K ++I D LARD+
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 384 PSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPF 441
+ P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 249
Query: 442 EMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
E L++G R+ P E++ M CW P RPTF +L
Sbjct: 250 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 292
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 36 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 92
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 93 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 142
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 143 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 262
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 263 LCWTYDVENRPGFAAVELRLRNYY 286
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 380 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 436
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 437 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 486
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 487 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 606
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 607 LCWTYDVENRPGFAAVELRLRNYY 630
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 16 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 72
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 73 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 122
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 123 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 242
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 243 LCWTYDVENRPGFAAVELRLRNYY 266
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 381 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 437
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 438 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 487
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 488 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 607
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 608 LCWTYDVENRPGFAAVELRLRNYY 631
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 28 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 84
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 85 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 134
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 254
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 255 LCWTYDVENRPGFAAVELRLRNYY 278
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 18 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 74
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 75 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 124
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 125 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 244
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 245 LCWTYDVENRPGFAAVELRLRNYY 268
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 78
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 79 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 128
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 248
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 249 LCWTYDVENRPGFAAVELRLRNYY 272
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 94
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 95 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 144
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 145 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 264
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 265 LCWTYDVENRPGFAAVELRLRNYY 288
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 126/264 (47%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 38 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 94
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 95 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 144
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD-YHCLGDNENRPVKWLAIESLVH 408
A RN ++ + +I+D L++ L + Y+ + PVKW A E + +
Sbjct: 145 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 264
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 265 LCWTYDVENRPGFAAVELRLRNYY 288
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 133/299 (44%), Gaps = 13/299 (4%)
Query: 198 PSYSRLDDRNKDLHEKLSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVE--EEVLV 255
P LD+ + L S+ R R+ L G FG+V D V V
Sbjct: 4 PDELPLDEHCERLPYDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAV 63
Query: 256 KTVTDNASAVQVSLLLQEGMAMYGLSHK-NILTVLGVSIEDHTSPFLIYPYQDYTNLKRF 314
K + + A+ + L+ E + + H N++ +LG + +I + + NL +
Sbjct: 64 KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 123
Query: 315 LQKCK------LCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDD 367
L+ + PE + LT + ++ Q+ G+++ A RN ++ +
Sbjct: 124 LRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 183
Query: 368 KLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWEL 427
K ++I D LARD+ + P+KW+A E++ + ++ SDVW+FGVLLWE+
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 428 TTLAQQPY--AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+L PY +ID E L++G R+ P E++ M CW P RPTF +L
Sbjct: 244 FSLGASPYPGVKIDE-EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 124/264 (46%), Gaps = 17/264 (6%)
Query: 233 GTFGRVYRGTYT---EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG V +G Y V ++L D A + LL E M L + I+ ++
Sbjct: 22 GNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDE---LLAEANVMQQLDNPYIVRMI 78
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
G+ + S L+ + L ++LQ+ + + + ++++ Q+ MG++Y
Sbjct: 79 GIC--EAESWMLVMEMAELGPLNKYLQQNR--------HVKDKNIIELVHQVSMGMKYLE 128
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR-PVKWLAIESLVH 408
A RN ++ + +I+D L++ L + + PVKW A E + +
Sbjct: 129 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMA 468
FS+ SDVW+FGVL+WE + Q+PY + E+ A L+ G R+ P CP E++ +M
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMYDLMN 248
Query: 469 YCWAMNPEGRPTFPQLHSCLQEFH 492
CW + E RP F + L+ ++
Sbjct: 249 LCWTYDVENRPGFAAVELRLRNYY 272
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 127/272 (46%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 21 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 79
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 80 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 132
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD--YHCLGDNENRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D Y+ + + P+ W A ESL
Sbjct: 133 TKRYIHRNLATRNILVENENRVKIGDFGLTK-VLPQDKEYYKVKEPGESPIFWYAPESLT 191
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 192 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 251
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 252 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 283
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 131
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEFFKVKEPGESPIFWYAPESLT 190
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 88/158 (55%), Gaps = 3/158 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS-DY 387
+T ++++ Q+ G+++ A RN ++ + ++I D LARD++ + DY
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 388 HCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE-MAAS 446
GD P+KW+A ES+ K +ST SDVW++GVLLWE+ +L PY + E +
Sbjct: 256 VRKGDT-RLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSR 314
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L++G R+ P E++ +M CW +P+ RP F +L
Sbjct: 315 LREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAEL 352
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 128/284 (45%), Gaps = 28/284 (9%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 18 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 76
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 77 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 129
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 130 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 188
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 189 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 248
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLT 496
L +P CPDE++ +M CW N RP+F L + + Q+
Sbjct: 249 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 292
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 38 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 96
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 97 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 149
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 268
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 269 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 19 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 77
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 78 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 130
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 131 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 189
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQ---PYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 190 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 249
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 250 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 281
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 38 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 96
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 97 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 149
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 150 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 208
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 209 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 268
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 269 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 300
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 131
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 24 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 82
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 83 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 135
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 136 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 194
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 195 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 254
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 255 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 286
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 20 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 78
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 79 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 131
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 132 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 190
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQ---PYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 191 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 250
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 251 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 26 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 84
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 85 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 137
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 138 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 196
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 197 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 256
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 257 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 288
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 23 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 82 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 134
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 128/284 (45%), Gaps = 28/284 (9%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 51 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 109
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 110 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 162
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 163 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 221
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 222 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 281
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLT 496
L +P CPDE++ +M CW N RP+F L + + Q+
Sbjct: 282 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 27 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 85
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 86 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 138
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 139 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 197
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 198 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 257
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 258 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 289
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 25 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 83
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 84 VCYSAGRRNLKLIMEYLPYGSLRDYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 136
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 137 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 195
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 196 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 255
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 256 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 287
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 124/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 23 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI + Y +L+ +LQK K E + H Q +C G++Y
Sbjct: 82 VCYSAGRRNLKLIMEFLPYGSLREYLQKHK---ERIDHIKLLQYTSQIC----KGMEYLG 134
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 19/295 (6%)
Query: 221 RCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAM- 277
R R+ G FG+V T + V VK + +A + L+ E +
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 81
Query: 278 YGLSHKNILTVLGV-SIEDHTSPFLIYPYQDYTNLKRFLQKCK---LCPEGVAHTLTTQE 333
Y +H NI+ +LG +I T +I Y Y +L FL++ + +C + + E
Sbjct: 82 YLGNHMNIVNLLGACTIGGPT--LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 334 VV-------DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD 386
+ Q+ G+ + A RN ++ +I D LARD+
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPFEMA 444
+ + N PVKW+A ES+ + ++ SDVW++G+ LWEL +L PY +D +
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFY 258
Query: 445 ASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
+++G+R+ P + P E++ +M CW +P RPTF Q+ +++ ++ T ++
Sbjct: 259 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 313
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
LT + ++ Q+ G+++ A RN ++ +K ++I D LARD++ +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPFEMAAS 446
+ P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID E
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR 306
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L++G R+ P E++ M CW P RPTF +L
Sbjct: 307 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 344
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 17/294 (5%)
Query: 221 RCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAM- 277
R R+ G FG+V T + V VK + +A + L+ E +
Sbjct: 38 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 97
Query: 278 YGLSHKNILTVLGV-SIEDHTSPFLIYPYQDYTNLKRFLQKCK---LCPEGVAHTLTTQE 333
Y +H NI+ +LG +I T +I Y Y +L FL++ + +C + + E
Sbjct: 98 YLGNHMNIVNLLGACTIGGPT--LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 155
Query: 334 VV-------DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD 386
+ Q+ G+ + A RN ++ +I D LARD+
Sbjct: 156 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID-PFEMAA 445
+ + N PVKW+A ES+ + ++ SDVW++G+ LWEL +L PY + +
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 275
Query: 446 SLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
+++G+R+ P + P E++ +M CW +P RPTF Q+ +++ ++ T ++
Sbjct: 276 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 329
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
LT + ++ Q+ G+++ A RN ++ +K ++I D LARD++ +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPFEMAAS 446
+ P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID E
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR 308
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L++G R+ P E++ M CW P RPTF +L
Sbjct: 309 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 346
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
LT + ++ Q+ G+++ A RN ++ +K ++I D LARD++ +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPFEMAAS 446
+ P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID E
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR 315
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L++G R+ P E++ M CW P RPTF +L
Sbjct: 316 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 353
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 17/294 (5%)
Query: 221 RCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAM- 277
R R+ G FG+V T + V VK + +A + L+ E +
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 278 YGLSHKNILTVLGV-SIEDHTSPFLIYPYQDYTNLKRFLQKCK---LCPEGVAHTLTTQE 333
Y +H NI+ +LG +I T +I Y Y +L FL++ + +C + + E
Sbjct: 105 YLGNHMNIVNLLGACTIGGPT--LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 334 VV-------DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD 386
+ Q+ G+ + A RN ++ +I D LARD+
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID-PFEMAA 445
+ + N PVKW+A ES+ + ++ SDVW++G+ LWEL +L PY + +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 282
Query: 446 SLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
+++G+R+ P + P E++ +M CW +P RPTF Q+ +++ ++ T ++
Sbjct: 283 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 135/295 (45%), Gaps = 19/295 (6%)
Query: 221 RCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAM- 277
R R+ G FG+V T + V VK + +A + L+ E +
Sbjct: 40 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 99
Query: 278 YGLSHKNILTVLGV-SIEDHTSPFLIYPYQDYTNLKRFLQKCK---LCPEGVAHTLTTQE 333
Y +H NI+ +LG +I T +I Y Y +L FL++ + +C + + E
Sbjct: 100 YLGNHMNIVNLLGACTIGGPT--LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 157
Query: 334 VV-------DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD 386
+ Q+ G+ + A RN ++ +I D LARD+
Sbjct: 158 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPFEMA 444
+ + N PVKW+A ES+ + ++ SDVW++G+ LWEL +L PY +D +
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFY 276
Query: 445 ASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
+++G+R+ P + P E++ +M CW +P RPTF Q+ +++ ++ T ++
Sbjct: 277 KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 331
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 3/158 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
LT + ++ Q+ G+++ A RN ++ +K ++I D LARD++ +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY--AEIDPFEMAAS 446
+ P+KW+A E++ + ++ SDVW+FGVLLWE+ +L PY +ID E
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRR 313
Query: 447 LQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L++G R+ P E++ M CW P RPTF +L
Sbjct: 314 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 351
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 123/272 (45%), Gaps = 28/272 (10%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y +D E V VK + +++ + +E + L H NI+ G
Sbjct: 23 KGNFGSVEMCRYDPLQDNTGEVVAVKKLQ-HSTEEHLRDFEREIEILKSLQHDNIVKYKG 81
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
V LI Y Y +L+ +LQ A + +++ QI G++Y
Sbjct: 82 VCYSAGRRNLKLIMEYLPYGSLRDYLQ-------AHAERIDHIKLLQYTSQICKGMEYLG 134
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIESLV 407
ATRN +V+++ R++I D L + + P D E P+ W A ESL
Sbjct: 135 TKRYIHRDLATRNILVENENRVKIGDFGLTK-VLPQDKEXXKVKEPGESPIFWYAPESLT 193
Query: 408 HKTFSTASDVWAFGVLLWELTTL---AQQPYAE------------IDPFEMAASLQDGYR 452
FS ASDVW+FGV+L+EL T ++ P AE + F + L++ R
Sbjct: 194 ESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGR 253
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L +P CPDE++ +M CW N RP+F L
Sbjct: 254 LPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 285
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 133/294 (45%), Gaps = 17/294 (5%)
Query: 221 RCRVRLFSVNMEGTFGRVYRGTYTE--EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAM- 277
R R+ G FG+V T + V VK + +A + L+ E +
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 278 YGLSHKNILTVLGV-SIEDHTSPFLIYPYQDYTNLKRFLQKCK---LCPEGVAHTLTTQE 333
Y +H NI+ +LG +I T +I Y Y +L FL++ + +C + + E
Sbjct: 105 YLGNHMNIVNLLGACTIGGPT--LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 162
Query: 334 VV-------DMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSD 386
+ Q+ G+ + A RN ++ +I D LAR +
Sbjct: 163 LALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID-PFEMAA 445
+ + N PVKW+A ES+ + ++ SDVW++G+ LWEL +L PY + +
Sbjct: 223 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYK 282
Query: 446 SLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
+++G+R+ P + P E++ +M CW +P RPTF Q+ +++ ++ T ++
Sbjct: 283 MIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNHI 336
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 26/280 (9%)
Query: 232 EGTFGRVYRGTYT-EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG FG+V Y DG E V VK + + S QE + L H++I+ G
Sbjct: 24 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG 83
Query: 291 V-SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ S L+ Y +L+ +L + H++ +++ QI G+ Y
Sbjct: 84 CCEDQGEKSLQLVMEYVPLGSLRDYLPR---------HSIGLAQLLLFAQQICEGMAYLH 134
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS-DYHCLGDNENRPVKWLAIESLVH 408
A RN ++D+ ++I D LA+ + +Y+ + ++ + PV W A E L
Sbjct: 135 AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 409 KTFSTASDVWAFGVLLWELTTL---AQQP-----------YAEIDPFEMAASLQDGYRLN 454
F ASDVW+FGV L+EL T +Q P ++ + L+ G RL
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 455 QPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQ 494
+P CP E++ +M CW RPTF L L+ H +
Sbjct: 255 RPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 26/280 (9%)
Query: 232 EGTFGRVYRGTYT-EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG FG+V Y DG E V VK + + S QE + L H++I+ G
Sbjct: 24 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKG 83
Query: 291 V-SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ S L+ Y +L+ +L + H++ +++ QI G+ Y
Sbjct: 84 CCEDQGEKSLQLVMEYVPLGSLRDYLPR---------HSIGLAQLLLFAQQICEGMAYLH 134
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS-DYHCLGDNENRPVKWLAIESLVH 408
A RN ++D+ ++I D LA+ + +Y+ + ++ + PV W A E L
Sbjct: 135 SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 194
Query: 409 KTFSTASDVWAFGVLLWELTTL---AQQP-----------YAEIDPFEMAASLQDGYRLN 454
F ASDVW+FGV L+EL T +Q P ++ + L+ G RL
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 254
Query: 455 QPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQ 494
+P CP E++ +M CW RPTF L L+ H +
Sbjct: 255 RPDKCPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 294
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 26/280 (9%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG FG+V Y DG E V VK + +A S QE + L H++I+ G
Sbjct: 41 EGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKG 100
Query: 291 VSIEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ + L+ Y +L+ +L + H++ +++ QI G+ Y
Sbjct: 101 CCEDAGAASLQLVMEYVPLGSLRDYLPR---------HSIGLAQLLLFAQQICEGMAYLH 151
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS-DYHCLGDNENRPVKWLAIESLVH 408
A RN ++D+ ++I D LA+ + + + + ++ + PV W A E L
Sbjct: 152 AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 409 KTFSTASDVWAFGVLLWELTTL---AQQP-----------YAEIDPFEMAASLQDGYRLN 454
F ASDVW+FGV L+EL T +Q P ++ + L+ G RL
Sbjct: 212 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLP 271
Query: 455 QPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQ 494
+P CP E++ +M CW RPTF L L+ H +
Sbjct: 272 RPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEK 311
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 232 EGTFGRVYRGTYT-EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG FG+V Y DG E V VK + + S +E + L H++I+ G
Sbjct: 18 EGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG 77
Query: 291 V-SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ S L+ Y +L+ +L + H + +++ QI G+ Y
Sbjct: 78 CCEDQGEKSVQLVMEYVPLGSLRDYLPR---------HCVGLAQLLLFAQQICEGMAYLH 128
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS-DYHCLGDNENRPVKWLAIESLVH 408
A RN ++D+ ++I D LA+ + +Y+ + ++ + PV W A E L
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 409 KTFSTASDVWAFGVLLWELTTLA---QQPY-----------AEIDPFEMAASLQDGYRLN 454
F ASDVW+FGV L+EL T Q P+ ++ + L+ G RL
Sbjct: 189 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 248
Query: 455 QPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+P CP E++ +M CW RPTF L LQ
Sbjct: 249 RPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 283
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 119/275 (43%), Gaps = 26/275 (9%)
Query: 232 EGTFGRVYRGTYT-EEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG FG+V Y DG E V VK + + S +E + L H++I+ G
Sbjct: 19 EGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKG 78
Query: 291 V-SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ S L+ Y +L+ +L + H + +++ QI G+ Y
Sbjct: 79 CCEDQGEKSVQLVMEYVPLGSLRDYLPR---------HCVGLAQLLLFAQQICEGMAYLH 129
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS-DYHCLGDNENRPVKWLAIESLVH 408
A RN ++D+ ++I D LA+ + +Y+ + ++ + PV W A E L
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 409 KTFSTASDVWAFGVLLWELTTLA---QQPY-----------AEIDPFEMAASLQDGYRLN 454
F ASDVW+FGV L+EL T Q P+ ++ + L+ G RL
Sbjct: 190 CKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLP 249
Query: 455 QPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+P CP E++ +M CW RPTF L LQ
Sbjct: 250 RPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQ 284
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/277 (29%), Positives = 117/277 (42%), Gaps = 35/277 (12%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y D V VK + + Q +E + L I+ G
Sbjct: 20 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSDFIVKYRG 78
Query: 291 VSI-EDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
VS S L+ Y L+ FLQ+ + L ++ QI G++Y
Sbjct: 79 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-------RLDASRLLLYSSQICKGMEYLG 131
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFP--SDYHCLGDNENRPVKWLAIESLV 407
A RN +V+ + ++I D LA+ L P DY+ + + P+ W A ESL
Sbjct: 132 SRRCVHRDLAARNILVESEAHVKIADFGLAK-LLPLDKDYYVVREPGQSPIFWYAPESLS 190
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQ---PYAEIDPFEMAASLQD-------------GY 451
FS SDVW+FGV+L+EL T + P AE M S +D G
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGSERDVPALSRLLELLEEGQ 248
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTF----PQL 484
RL P CP E+ +M CWA +P+ RP+F PQL
Sbjct: 249 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 285
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y D V VK + + Q +E + L I+ G
Sbjct: 21 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSDFIVKYRG 79
Query: 291 VSI-EDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
VS S L+ Y L+ FLQ+ + L ++ QI G++Y
Sbjct: 80 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-------RLDASRLLLYSSQICKGMEYLG 132
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFP--SDYHCLGDNENRPVKWLAIESLV 407
A RN +V+ + ++I D LA+ L P DY+ + + P+ W A ESL
Sbjct: 133 SRRCVHRDLAARNILVESEAHVKIADFGLAK-LLPLDKDYYVVREPGQSPIFWYAPESLS 191
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQ---PYAEIDPFEMAASLQD-------------GY 451
FS SDVW+FGV+L+EL T + P AE M +D G
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCERDVPALCRLLELLEEGQ 249
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTF----PQL 484
RL P CP E+ +M CWA +P+ RP+F PQL
Sbjct: 250 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 286
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 116/277 (41%), Gaps = 35/277 (12%)
Query: 232 EGTFGRVYRGTYTE-EDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G FG V Y D V VK + + Q +E + L I+ G
Sbjct: 33 KGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQ-REIQILKALHSDFIVKYRG 91
Query: 291 VSI-EDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
VS S L+ Y L+ FLQ+ + L ++ QI G++Y
Sbjct: 92 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-------RLDASRLLLYSSQICKGMEYLG 144
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFP--SDYHCLGDNENRPVKWLAIESLV 407
A RN +V+ + ++I D LA+ L P DY+ + + P+ W A ESL
Sbjct: 145 SRRCVHRDLAARNILVESEAHVKIADFGLAK-LLPLDKDYYVVREPGQSPIFWYAPESLS 203
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQ---PYAEIDPFEMAASLQD-------------GY 451
FS SDVW+FGV+L+EL T + P AE M +D G
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCERDVPALSRLLELLEEGQ 261
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTF----PQL 484
RL P CP E+ +M CWA +P+ RP+F PQL
Sbjct: 262 RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 298
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 128/283 (45%), Gaps = 28/283 (9%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTD-NASAVQVSLLLQEG 274
++ I C + + G+FG V+R + D V VK + + + A +V+ L+E
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSD-----VAVKILMEQDFHAERVNEFLREV 85
Query: 275 MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEV 334
M L H NI+ +G ++ + ++ Y +L R L K G L +
Sbjct: 86 AIMKRLRHPNIVLFMG-AVTQPPNLSIVTEYLSRGSLYRLLHKS-----GAREQLDERRR 139
Query: 335 VDMCLQIIMGVQYXXXXXXXXXXXATR--NCVVDDKLRIQITDNALAR---DLFPSDYHC 389
+ M + G+ Y + N +VD K +++ D L+R F S
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSA 199
Query: 390 LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
G E W+A E L + + SDV++FGV+LWEL TL QQP+ ++P ++ A++
Sbjct: 200 AGTPE-----WMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV-- 251
Query: 450 GY---RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
G+ RL P N ++ +++ CW P RP+F + L+
Sbjct: 252 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 129/280 (46%), Gaps = 22/280 (7%)
Query: 216 ELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTD-NASAVQVSLLLQEG 274
++ I C + + G+FG V+R + D V VK + + + A +V+ L+E
Sbjct: 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSD-----VAVKILMEQDFHAERVNEFLREV 85
Query: 275 MAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEV 334
M L H NI+ +G ++ + ++ Y +L R L K G L +
Sbjct: 86 AIMKRLRHPNIVLFMG-AVTQPPNLSIVTEYLSRGSLYRLLHKS-----GAREQLDERRR 139
Query: 335 VDMCLQIIMGVQYXXXXXXXXXXXATR--NCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
+ M + G+ Y + N +VD K +++ D L+R L S +
Sbjct: 140 LSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKX 198
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY- 451
P +W+A E L + + SDV++FGV+LWEL TL QQP+ ++P ++ A++ G+
Sbjct: 199 AAGTP-EWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPWGNLNPAQVVAAV--GFK 254
Query: 452 --RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
RL P N ++ +++ CW P RP+F + L+
Sbjct: 255 CKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLR 294
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 78/167 (46%), Gaps = 25/167 (14%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFP--SDYHCLGDNENRP 397
QI G++Y A RN +V+ + ++I D LA+ L P D + + P
Sbjct: 119 QICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAK-LLPLDKDXXVVREPGQSP 177
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQ---PYAEIDPFEMAASLQD----- 449
+ W A ESL FS SDVW+FGV+L+EL T + P AE M +D
Sbjct: 178 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF--LRMMGCERDVPALC 235
Query: 450 --------GYRLNQPVNCPDELFSVMAYCWAMNPEGRPTF----PQL 484
G RL P CP E+ +M CWA +P+ RP+F PQL
Sbjct: 236 RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 282
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 35/264 (13%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVT---DNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
G FG+VYR + + +EV VK D + + + QE L H NI+ +
Sbjct: 18 GGFGKVYRAFW-----IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 290 GVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
GV +++ + L+ + L R L ++ P+ +V+ +QI G+ Y
Sbjct: 73 GVCLKE-PNLCLVMEFARGGPLNRVLSGKRIPPD---------ILVNWAVQIARGMNYLH 122
Query: 350 XXXXXXXX---XATRNCVVDDKLR--------IQITDNALARDLFPSDYHCLGDNENRPV 398
+ N ++ K+ ++ITD LAR+ + +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAAGAY 178
Query: 399 KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL-QDGYRLNQPV 457
W+A E + FS SDVW++GVLLWEL T + P+ ID +A + + L P
Sbjct: 179 AWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAYGVAMNKLALPIPS 237
Query: 458 NCPDELFSVMAYCWAMNPEGRPTF 481
CP+ +M CW +P RP+F
Sbjct: 238 TCPEPFAKLMEDCWNPDPHSRPSF 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 119/273 (43%), Gaps = 25/273 (9%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 35 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E ++++D+ Q G+ Y
Sbjct: 89 STKPQLA--IVTQWCEGSSLYHHLHASETKFE-------MKKLIDIARQTARGMDYLHAK 139
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKT- 410
+ N + + ++I D LA + + + + W+A E + +
Sbjct: 140 SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDS 199
Query: 411 --FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPDEL 463
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP +
Sbjct: 200 NPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRM 258
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLT 496
+MA C + RP+FP++ + ++E +L+
Sbjct: 259 KRLMAECLKKKRDERPSFPRILAEIEELARELS 291
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 109/290 (37%), Gaps = 43/290 (14%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
+G FG+ + T+ E EV+V L+E M L H N+L +GV
Sbjct: 20 KGCFGQAIKVTHRETG----EVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQ----EVVDMCLQIIMGVQY 347
+D F I Y L+ G+ ++ +Q + V I G+ Y
Sbjct: 76 LYKDKRLNF-ITEYIKGGTLR-----------GIIKSMDSQYPWSQRVSFAKDIASGMAY 123
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLG-------DNENRPV-- 398
+ NC+V + + + D LAR + G D + R
Sbjct: 124 LHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVV 183
Query: 399 ---KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQ 455
W+A E + +++ DV++FG++L E+ DP + ++ G +
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNA-----DPDYLPRTMDFGLNVRG 238
Query: 456 ------PVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRYV 499
P NCP F + C ++PE RP+F +L L+ L ++
Sbjct: 239 FLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAGHL 288
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 29/275 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 23 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E ++++D+ Q G+ Y
Sbjct: 77 STKPQLA--IVTQWCEGSSLYHHLHASETKFE-------MKKLIDIARQTARGMDYLHAK 127
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + ++I D LA + + + + + + W+A E + +
Sbjct: 128 SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIRMQ 185
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 186 DSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK 244
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLT 496
+ +MA C + RP+FP++ + ++E +L+
Sbjct: 245 RMKRLMAECLKKKRDERPSFPRILAEIEELARELS 279
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 25/266 (9%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 39 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 93 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 143
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKT- 410
+ N + + L ++I D LA + + + + W+A E + +
Sbjct: 144 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 203
Query: 411 --FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPDEL 463
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP +
Sbjct: 204 NPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 262
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+MA C + RP FPQ+ + ++
Sbjct: 263 KRLMAECLKKKRDERPLFPQILASIE 288
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 25/266 (9%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 47 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 101 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 151
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKT- 410
+ N + + L ++I D LA + + + + W+A E + +
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 411 --FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPDEL 463
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP +
Sbjct: 212 NPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 270
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+MA C + RP FPQ+ + ++
Sbjct: 271 KRLMAECLKKKRDERPLFPQILASIE 296
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 115/266 (43%), Gaps = 25/266 (9%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 19 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 73 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 123
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKT- 410
+ N + + L ++I D LA + + + + W+A E + +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 411 --FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPDEL 463
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAM 242
Query: 464 FSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+MA C + RP FPQ+ + ++
Sbjct: 243 KRLMAECLKKKRDERPLFPQILASIE 268
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 116/270 (42%), Gaps = 29/270 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 35 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 292 SIEDHTSPFLIYPYQ--DYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
S T+P L Q + ++L L + E ++++D+ Q G+ Y
Sbjct: 89 S----TAPQLAIVTQWCEGSSLYHHLHASETKFE-------MKKLIDIARQTARGMDYLH 137
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + ++I D LA + + + + W+A E + +
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ 197
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPK 256
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
+ +MA C + RP+FP++ + ++E
Sbjct: 257 RMKRLMAECLKKKRDERPSFPRILAEIEEL 286
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 21 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 75 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 125
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + L ++I D LA + + + + + + W+A E + +
Sbjct: 126 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIRMQ 183
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 184 DKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 242
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +MA C + RP FPQ+ + ++
Sbjct: 243 AMKRLMAECLKKKRDERPLFPQILASIE 270
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 46 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 100 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 150
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + L ++I D LA + + + + + + W+A E + +
Sbjct: 151 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIRMQ 208
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 209 DKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 267
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +MA C + RP FPQ+ + ++
Sbjct: 268 AMKRLMAECLKKKRDERPLFPQILASIE 295
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 47 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 101 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 151
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + L ++I D LA + + + + + + W+A E + +
Sbjct: 152 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIRMQ 209
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 210 DKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 268
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +MA C + RP FPQ+ + ++
Sbjct: 269 AMKRLMAECLKKKRDERPLFPQILASIE 296
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 24 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 78 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 128
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + L ++I D LA + + + + + + W+A E + +
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIRMQ 186
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 245
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +MA C + RP FPQ+ + ++
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 24 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 78 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 128
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + L ++I D LA + + + + + + W+A E + +
Sbjct: 129 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIRMQ 186
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 187 DKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 245
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +MA C + RP FPQ+ + ++
Sbjct: 246 AMKRLMAECLKKKRDERPLFPQILASIE 273
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 117/268 (43%), Gaps = 29/268 (10%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 19 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S + + ++ + + ++L L + E + +++D+ Q G+ Y
Sbjct: 73 STKPQLA--IVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLHAK 123
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLVHK 409
+ N + + L ++I D LA + + + + + + W+A E + +
Sbjct: 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIRMQ 181
Query: 410 T---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NCPD 461
+S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NCP
Sbjct: 182 DKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPK 240
Query: 462 ELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
+ +MA C + RP FPQ+ + ++
Sbjct: 241 AMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 112/263 (42%), Gaps = 30/263 (11%)
Query: 232 EGTFGRVYRGTYTEEDGV----EEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILT 287
+GTF ++++G E E EVL+K V D A + M LSHK+++
Sbjct: 18 QGTFTKIFKGVRREVGDYGQLHETEVLLK-VLDKAHRNYSESFFEAASMMSKLSHKHLVL 76
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
GV + + L+ + + +L +L+K K C + L EV Q+ + +
Sbjct: 77 NYGVCVCGDEN-ILVQEFVKFGSLDTYLKKNKNC----INILWKLEVAK---QLAAAMHF 128
Query: 348 XXXXXXXXXXXATRNCVV---DDKLR-----IQITDNALARDLFPSDYHCLGDNENRPVK 399
+N ++ +D+ I+++D ++ + P D +
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL------QERIP 182
Query: 400 WLAIESLVH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
W+ E + + K + A+D W+FG LWE+ + +P + +D +D ++L P
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKA 242
Query: 459 CPDELFSVMAYCWAMNPEGRPTF 481
EL +++ C P+ RP+F
Sbjct: 243 A--ELANLINNCMDYEPDHRPSF 263
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 33/270 (12%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNA-SAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
G+FG VY+G + +V VK + A + Q+ E + H NIL +G
Sbjct: 19 GSFGTVYKGKW------HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 292 SIEDHTSPFLIYPYQ--DYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
S T+P L Q + ++L L + E + +++D+ Q G+ Y
Sbjct: 73 S----TAPQLAIVTQWCEGSSLYHHLHIIETKFEMI-------KLIDIARQTAQGMDYLH 121
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALA--RDLFPSDYHCLGDNENRPVKWLAIESLV 407
+ N + + L ++I D LA + + + + + + W+A E +
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQF--EQLSGSILWMAPEVIR 179
Query: 408 HKT---FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPV-----NC 459
+ +S SDV+AFG++L+EL T Q PY+ I+ + + L+ + NC
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNC 238
Query: 460 PDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
P + +MA C + RP FPQ+ + ++
Sbjct: 239 PKAMKRLMAECLKKKRDERPLFPQILASIE 268
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 30/263 (11%)
Query: 232 EGTFGRVYRGTYTEEDGV----EEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILT 287
+GTF ++++G E E EVL+K V D A + M LSHK+++
Sbjct: 18 QGTFTKIFKGVRREVGDYGQLHETEVLLK-VLDKAHRNYSESFFEAASMMSKLSHKHLVL 76
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
GV + L+ + + +L +L+K K C + L EV Q+ + +
Sbjct: 77 NYGVCFCGDEN-ILVQEFVKFGSLDTYLKKNKNC----INILWKLEVAK---QLAWAMHF 128
Query: 348 XXXXXXXXXXXATRNCVV---DDKLR-----IQITDNALARDLFPSDYHCLGDNENRPVK 399
+N ++ +D+ I+++D ++ + P D +
Sbjct: 129 LEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDIL------QERIP 182
Query: 400 WLAIESLVH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVN 458
W+ E + + K + A+D W+FG LWE+ + +P + +D +D ++L P
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKA 242
Query: 459 CPDELFSVMAYCWAMNPEGRPTF 481
EL +++ C P+ RP+F
Sbjct: 243 A--ELANLINNCMDYEPDHRPSF 263
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 29/270 (10%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
E G +++G + D V + + V+ + S + +E + SH N+L VLG
Sbjct: 20 ENHSGELWKGRWQGNDIVVKVLKVR----DWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 292 -SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
P LI + Y +L L EG + + V L + G+ +
Sbjct: 76 CQSPPAPHPTLITHWMPYGSLYNVLH------EGTNFVVDQSQAVKFALDMARGMAFLHT 129
Query: 351 XXXXXXXXA--TRNCVVDDKL--RIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESL 406
A +R+ ++D+ + RI + D + F S W+A E+L
Sbjct: 130 LEPLIPRHALNSRSVMIDEDMTARISMADVKFS---FQSPGRMYAP------AWVAPEAL 180
Query: 407 VHKTFST---ASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ-DGYRLNQPVNCPDE 462
K T ++D+W+F VLLWEL T + P+A++ E+ + +G R P
Sbjct: 181 QKKPEDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGMKVALEGLRPTIPPGISPH 239
Query: 463 LFSVMAYCWAMNPEGRPTFPQLHSCLQEFH 492
+ +M C +P RP F + L++
Sbjct: 240 VSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 122/280 (43%), Gaps = 41/280 (14%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLL------LQEGMAMYGLSHKNI 285
+G FG V++G ++ V V +K++ S + ++ +E M L+H NI
Sbjct: 29 KGGFGLVHKGRLVKDKSV---VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNL-KRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
+ + G+ H P ++ + +L R L K AH + + + L I +G
Sbjct: 86 VKLYGLM---HNPPRMVMEFVPCGDLYHRLLDK--------AHPIKWSVKLRLMLDIALG 134
Query: 345 VQYXXXXXXXXXXXATRNCVV-----DDKLRI--QITDNALARDLFPSDYHCLGDNENRP 397
++Y R+ + D+ + ++ D +L++ S LG+
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGN----- 189
Query: 398 VKWLAIESL--VHKTFSTASDVWAFGVLLWELTT----LAQQPYAEIDPFEMAASLQDGY 451
+W+A E++ ++++ +D ++F ++L+ + T + Y +I M ++G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEGL 247
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
R P +CP L +V+ CW+ +P+ RP F + L E
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 124/285 (43%), Gaps = 35/285 (12%)
Query: 219 IQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMY 278
I+ V L + G+FG VY+G + + V+ ++K V + + Q E +
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVK---ILKVV--DPTPEQFQAFRNEVAVLR 87
Query: 279 GLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQ----EV 334
H NIL +G +D+ + ++ + + ++L + L H T+ ++
Sbjct: 88 KTRHVNILLFMGYMTKDNLA--IVTQWCEGSSLYKHL-----------HVQETKFQMFQL 134
Query: 335 VDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE 394
+D+ Q G+ Y + N + + L ++I D LA +
Sbjct: 135 IDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQP 194
Query: 395 NRPVKWLAIESLVHKT---FSTASDVWAFGVLLWELTTLAQQPYAEIDPF-EMAASLQDG 450
V W+A E + + FS SDV+++G++L+EL T + PY+ I+ ++ + G
Sbjct: 195 TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMVGRG 253
Query: 451 Y------RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQ 489
Y +L + NCP + ++A C E RP FPQ+ S ++
Sbjct: 254 YASPDLSKLYK--NCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 121/280 (43%), Gaps = 41/280 (14%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLL------LQEGMAMYGLSHKNI 285
+G FG V++G ++ V V +K++ S + ++ +E M L+H NI
Sbjct: 29 KGGFGLVHKGRLVKDKSV---VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNL-KRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
+ + G+ H P ++ + +L R L K AH + + + L I +G
Sbjct: 86 VKLYGLM---HNPPRMVMEFVPCGDLYHRLLDK--------AHPIKWSVKLRLMLDIALG 134
Query: 345 VQYXXXXXXXXXXXATRNCVV-----DDKLRI--QITDNALARDLFPSDYHCLGDNENRP 397
++Y R+ + D+ + ++ D L++ S LG+
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGN----- 189
Query: 398 VKWLAIESL--VHKTFSTASDVWAFGVLLWELTT----LAQQPYAEIDPFEMAASLQDGY 451
+W+A E++ ++++ +D ++F ++L+ + T + Y +I M ++G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEGL 247
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
R P +CP L +V+ CW+ +P+ RP F + L E
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 30/259 (11%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V + + +D V +K + + + L++ + ++H NI+ + G
Sbjct: 19 GAFGVVCKAKWRAKD-----VAIKQIESESERKAFIVELRQ---LSRVNHPNIVKLYGAC 70
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ +P L+ Y + +L L + P T + CLQ GV Y
Sbjct: 71 L----NPVCLVMEYAEGGSLYNVLHGAEPLP-----YYTAAHAMSWCLQCSQGVAYLHSM 121
Query: 352 XXXXXXXATRN----CVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
+V ++I D A D+ N W+A E
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKGSAAWMAPEVFE 176
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEID--PFEMAASLQDGYRLNQPVNCPDELFS 465
+S DV+++G++LWE+ T ++P+ EI F + ++ +G R N P + S
Sbjct: 177 GSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES 235
Query: 466 VMAYCWAMNPEGRPTFPQL 484
+M CW+ +P RP+ ++
Sbjct: 236 LMTRCWSKDPSQRPSMEEI 254
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 104/259 (40%), Gaps = 30/259 (11%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V + + +D V +K + + + L++ + ++H NI+ + G
Sbjct: 20 GAFGVVCKAKWRAKD-----VAIKQIESESERKAFIVELRQ---LSRVNHPNIVKLYGAC 71
Query: 293 IEDHTSPF-LIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
+ +P L+ Y + +L L + P T + CLQ GV Y
Sbjct: 72 L----NPVCLVMEYAEGGSLYNVLHGAEPLP-----YYTAAHAMSWCLQCSQGVAYLHSM 122
Query: 352 XXXXXXXATRN----CVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
+V ++I D A D+ N W+A E
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI-----QTHMTNNKGSAAWMAPEVFE 177
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEID--PFEMAASLQDGYRLNQPVNCPDELFS 465
+S DV+++G++LWE+ T ++P+ EI F + ++ +G R N P + S
Sbjct: 178 GSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIES 236
Query: 466 VMAYCWAMNPEGRPTFPQL 484
+M CW+ +P RP+ ++
Sbjct: 237 LMTRCWSKDPSQRPSMEEI 255
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 120/280 (42%), Gaps = 41/280 (14%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLL------LQEGMAMYGLSHKNI 285
+G FG V++G ++ V V +K++ S + ++ +E M L+H NI
Sbjct: 29 KGGFGLVHKGRLVKDKSV---VAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNI 85
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNL-KRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
+ + G+ H P ++ + +L R L K AH + + + L I +G
Sbjct: 86 VKLYGLM---HNPPRMVMEFVPCGDLYHRLLDK--------AHPIKWSVKLRLMLDIALG 134
Query: 345 VQYXXXXXXXXXXXATRNCVV-----DDKLRI--QITDNALARDLFPSDYHCLGDNENRP 397
++Y R+ + D+ + ++ D ++ S LG+
Sbjct: 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGN----- 189
Query: 398 VKWLAIESL--VHKTFSTASDVWAFGVLLWELTT----LAQQPYAEIDPFEMAASLQDGY 451
+W+A E++ ++++ +D ++F ++L+ + T + Y +I M ++G
Sbjct: 190 FQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIR--EEGL 247
Query: 452 RLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
R P +CP L +V+ CW+ +P+ RP F + L E
Sbjct: 248 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 114/264 (43%), Gaps = 25/264 (9%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG+VY+G DG + V +K T +S + + H ++++++G
Sbjct: 50 GVFGKVYKGVL--RDGAK--VALKRRTPESSQGIEEFETEIETLSF-CRHPHLVSLIGFC 104
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
++ LIY Y + NLKR L L +++ ++ +++C+ G+ Y
Sbjct: 105 -DERNEMILIYKYMENGNLKRHLYGSDLP----TMSMSWEQRLEICIGAARGLHYLHTRA 159
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
+ N ++D+ +ITD +++ D L + ++ E + +
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLT 219
Query: 413 TASDVWAFGVLLWEL----TTLAQQ-PYAEIDPFEMAASLQDGYRLNQPV--NCPDEL-- 463
SDV++FGV+L+E+ + + Q P ++ E A + +L Q V N D++
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP 279
Query: 464 -----FSVMAY-CWAMNPEGRPTF 481
F A C A++ E RP+
Sbjct: 280 ESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 101/266 (37%), Gaps = 25/266 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
E G +++G + D V + + V+ + S + +E + SH N+L VLG
Sbjct: 20 ENHSGELWKGRWQGNDIVVKVLKVR----DWSTRKSRDFNEECPRLRIFSHPNVLPVLGA 75
Query: 292 -SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
P LI + Y +L L EG + + V L G +
Sbjct: 76 CQSPPAPHPTLITHWXPYGSLYNVLH------EGTNFVVDQSQAVKFALDXARGXAFLHT 129
Query: 351 XXXXXXXXA--TRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
A +R+ +D+ +I+ + + W+A E+L
Sbjct: 130 LEPLIPRHALNSRSVXIDEDXTARISXADVK-------FSFQSPGRXYAPAWVAPEALQK 182
Query: 409 KTFST---ASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ-DGYRLNQPVNCPDELF 464
K T ++D W+F VLLWEL T + P+A++ E+ + +G R P +
Sbjct: 183 KPEDTNRRSADXWSFAVLLWELVT-REVPFADLSNXEIGXKVALEGLRPTIPPGISPHVS 241
Query: 465 SVMAYCWAMNPEGRPTFPQLHSCLQE 490
+ C +P RP F + L++
Sbjct: 242 KLXKICXNEDPAKRPKFDXIVPILEK 267
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 113/264 (42%), Gaps = 25/264 (9%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG+VY+G DG + V +K T +S + + H ++++++G
Sbjct: 50 GVFGKVYKGVL--RDGAK--VALKRRTPESSQGIEEFETEIETLSF-CRHPHLVSLIGFC 104
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXX 352
++ LIY Y + NLKR L L +++ ++ +++C+ G+ Y
Sbjct: 105 -DERNEMILIYKYMENGNLKRHLYGSDLP----TMSMSWEQRLEICIGAARGLHYLHTRA 159
Query: 353 XXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFS 412
+ N ++D+ +ITD +++ L + ++ E + +
Sbjct: 160 IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLT 219
Query: 413 TASDVWAFGVLLWEL----TTLAQQ-PYAEIDPFEMAASLQDGYRLNQPV--NCPDEL-- 463
SDV++FGV+L+E+ + + Q P ++ E A + +L Q V N D++
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRP 279
Query: 464 -----FSVMAY-CWAMNPEGRPTF 481
F A C A++ E RP+
Sbjct: 280 ESLRKFGDTAVKCLALSSEDRPSM 303
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 69
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + D +LK+F+ L G+ L + Q++ G+ +
Sbjct: 70 LLDV-IHTENKLYLVFEHVD-QDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 121
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 178
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 229
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 230 VWPGVTSM-PDYKPSFPK 246
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLSF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 20 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 73
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 74 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 125
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 182
Query: 407 V-HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 233
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 234 VWPGVTSM-PDYKPSFPK 250
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 67
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 68 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 119
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 176
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 227
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 228 VWPGVTSM-PDYKPSFPK 244
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 20 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 73
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 74 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 125
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 182
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 233
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 234 VWPGVTSM-PDYKPSFPK 250
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 17 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 70
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 71 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 122
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 179
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 230
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 231 VWPGVTSM-PDYKPSFPK 247
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 175
Query: 407 V-HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 65
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 66 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 117
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 174
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 225
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 226 VWPGVTSM-PDYKPSFPK 242
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 65
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 66 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 117
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 174
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 225
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 226 VWPGVTSM-PDYKPSFPK 242
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 69
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 70 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 121
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 178
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 229
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 230 VWPGVTSM-PDYKPSFPK 246
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 68
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 69 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 120
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 177
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 228
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 229 VWPGVTSM-PDYKPSFPK 245
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 69
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 70 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 121
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 178
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 229
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 230 VWPGVTSM-PDYKPSFPK 246
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 67
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 68 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 119
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 176
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 227
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 228 VWPGVTSM-PDYKPSFPK 244
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 68
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 69 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 120
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 177
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 228
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 229 VWPGVTSM-PDYKPSFPK 245
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 99/230 (43%), Gaps = 26/230 (11%)
Query: 232 EGTFGRVYRGTYTEEDGVEE-EVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G+FG+V+ + + + + L K V V+ +++ + +++ H LT +
Sbjct: 27 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL-AWEHP-FLTHMF 84
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
+ + + F + Y + +L +Q C H +II+G+Q+
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSC--------HKFDLSRATFYAAEIILGLQFLHS 136
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV----KWLAIESL 406
N ++D I+I D + ++ + LGD + ++A E L
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKE------NMLGDAKTNXFCGTPDYIAPEIL 190
Query: 407 VHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQP 456
+ + ++ + D W+FGVLL+E+ + Q P+ D E+ S+ R++ P
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEM-LIGQSPFHGQDEEELFHSI----RMDNP 235
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 116/294 (39%), Gaps = 45/294 (15%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
+G +G V+RG + G V + + D S + + + + L H NIL +
Sbjct: 18 KGRYGEVWRGLW---HGESVAVKIFSSRDEQSWFRETEIYNTVL----LRHDNILGFIAS 70
Query: 292 SIEDHTSP---FLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQI-IMGVQY 347
+ S +LI Y ++ +L FLQ+ L P + L + I G Q
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQ- 129
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALA-RDLFPSDYHCLGDNENRPVK-WLAIES 405
+RN +V L+ I D LA SDY +G+N K ++A E
Sbjct: 130 -GKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEV 188
Query: 406 LVHKTFS------TASDVWAFGVLLWELTTLA---------QQPYAEIDPFEMAASLQDG 450
L + + +D+WAFG++LWE+ + P+ ++ P + S +D
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPND--PSFEDM 246
Query: 451 YRL----NQPVNCPDELFS---------VMAYCWAMNPEGRPTFPQLHSCLQEF 491
++ Q P+ L + +M CW NP R T ++ LQ+
Sbjct: 247 KKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNPSARLTALRIKKTLQKI 300
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/230 (20%), Positives = 99/230 (43%), Gaps = 26/230 (11%)
Query: 232 EGTFGRVYRGTYTEEDGVEE-EVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
+G+FG+V+ + + + + L K V V+ +++ + +++ H LT +
Sbjct: 28 KGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL-AWEHP-FLTHMF 85
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
+ + + F + Y + +L +Q C H +II+G+Q+
Sbjct: 86 CTFQTKENLFFVMEYLNGGDLMYHIQSC--------HKFDLSRATFYAAEIILGLQFLHS 137
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV----KWLAIESL 406
N ++D I+I D + ++ + LGD + ++A E L
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKE------NMLGDAKTNEFCGTPDYIAPEIL 191
Query: 407 VHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQP 456
+ + ++ + D W+FGVLL+E+ + Q P+ D E+ S+ R++ P
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEM-LIGQSPFHGQDEEELFHSI----RMDNP 236
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 17 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 70
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 71 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 122
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 179
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 230
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 231 VWPGVTSM-PDYKPSFPK 247
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 65
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 66 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 117
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 174
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 225
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 226 VWPGVTSM-PDYKPSFPK 242
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 67
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 68 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 119
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 176
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 227
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 228 VWPGVTSM-PDYKPSFPK 244
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 65
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 66 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 117
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 174
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 225
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 226 VWPGVTSM-PDYKPSFPK 242
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 67
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 68 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 119
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
N +++ + I++ D LAR P + +E + + A E L
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 176
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 227
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 228 VWPGVTSM-PDYKPSFPK 244
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 111/281 (39%), Gaps = 44/281 (15%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
+G FG+VY G + E + L+ DN Q+ +E MA H+N++ +G
Sbjct: 43 KGRFGQVYHGRWHGEVAIR---LIDIERDNED--QLKAFKREVMAYRQTRHENVVLFMGA 97
Query: 292 SIEDHTSPFL--IYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXX 349
+ + P L I L ++ K+ L + + +I+ G+ Y
Sbjct: 98 CM---SPPHLAIITSLCKGRTLYSVVRDAKIV-------LDVNKTRQIAQEIVKGMGYLH 147
Query: 350 XXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENR---PVKWL----- 401
++N D+ ++ ITD L S G E++ WL
Sbjct: 148 AKGILHKDLKSKNVFYDNG-KVVITDFGL---FSISGVLQAGRREDKLRIQNGWLCHLAP 203
Query: 402 -AIESLVHKT------FSTASDVWAFGVLLWELTT----LAQQPYAEIDPFEMAASLQDG 450
I L T FS SDV+A G + +EL QP AE ++M ++
Sbjct: 204 EIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-AEAIIWQMGTGMKPN 262
Query: 451 YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEF 491
L+Q + E+ ++ +CWA E RPTF +L L++
Sbjct: 263 --LSQ-IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 68
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 69 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 120
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
N +++ + I++ D LAR P + +E + + A E L
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 177
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 228
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 229 VWPGVTSM-PDYKPSFPK 245
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E ++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E ++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 12 EGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 65
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 66 LLDV-IHTENKLYLVFEFL-HQDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 117
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 174
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 225
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 226 VWPGVTSM-PDYKPSFPK 242
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 14 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 67
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 68 LLDV-IHTENKLYLVFEFLS-MDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 119
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
N +++ + I++ D LAR P + +E + + A E L
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 176
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 227
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 228 VWPGVTSM-PDYKPSFPK 244
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 69
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + +LK+F+ L G+ L + Q++ G+ +
Sbjct: 70 LLDV-IHTENKLYLVFEFLS-MDLKKFMDASALT--GIPLPL----IKSYLFQLLQGLAF 121
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
N +++ + I++ D LAR P + +E + + A E L
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 178
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 229
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 230 VWPGVTSM-PDYKPSFPK 246
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EGT+ VY+G D + V +K + ++E + L H NI+T+ +
Sbjct: 12 EGTYATVYKGKSKLTDNL---VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
I S L++ Y D +LK++L C + + V Q++ G+ Y
Sbjct: 69 -IHTEKSLTLVFEYLD-KDLKQYLDDC-------GNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALAR-DLFPSDYHCLGDNENRPVKWLAIESLVHKT 410
+N +++++ +++ D LAR P+ + DNE + + + L+ T
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTY---DNEVVTLWYRPPDILLGST 176
Query: 411 -FSTASDVWAFGVLLWELTT 429
+ST D+W G + +E+ T
Sbjct: 177 DYSTQIDMWGVGCIFYEMAT 196
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 69
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK F+ L G+ L + Q++ G+ +
Sbjct: 70 LLDV-IHTENKLYLVFEFL-HQDLKTFMDASALT--GIPLPL----IKSYLFQLLQGLAF 121
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 178
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 229
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 230 VWPGVTSM-PDYKPSFPK 246
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 118/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 12 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 65
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK F+ L G+ L + Q++ G+ +
Sbjct: 66 LLDV-IHTENKLYLVFEHV-HQDLKTFMDASALT--GIPLPL----IKSYLFQLLQGLAF 117
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT---HEVVTLWYRAPEIL 174
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 225
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 226 VWPGVTSM-PDYKPSFPK 242
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 87/201 (43%), Gaps = 27/201 (13%)
Query: 233 GTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNIL 286
G+FGRV+ G Y +++E++V+ QV E + + ++H I+
Sbjct: 17 GSFGRVHLIRSRHNGRYYAMKVLKKEIVVR-------LKQVEHTNDERLMLSIVTHPFII 69
Query: 287 TVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQ 346
+ G + +D F+I Y + L L+K + P VA + +CL ++
Sbjct: 70 RMWG-TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE----VCL----ALE 120
Query: 347 YXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESL 406
Y N ++D I+ITD A+ + Y G + ++A E +
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD-----YIAPEVV 175
Query: 407 VHKTFSTASDVWAFGVLLWEL 427
K ++ + D W+FG+L++E+
Sbjct: 176 STKPYNKSIDWWSFGILIYEM 196
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 16 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 69
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + +LK F+ L G+ L + Q++ G+ +
Sbjct: 70 LLDV-IHTENKLYLVFEFLS-MDLKDFMDASALT--GIPLPL----IKSYLFQLLQGLAF 121
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 178
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 179 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 229
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 230 VWPGVTSM-PDYKPSFPK 246
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 13 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 66
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + + +LK F+ L G+ L + Q++ G+ +
Sbjct: 67 LLDV-IHTENKLYLVFEFL-HQDLKDFMDASALT--GIPLPL----IKSYLFQLLQGLAF 118
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
N +++ + I++ D LAR P + +E + + A E L
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 175
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 226
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 227 VWPGVTSM-PDYKPSFPK 243
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 117/258 (45%), Gaps = 33/258 (12%)
Query: 232 EGTFGRVY--RGTYTEEDGVEEEVLVKTVTDN--ASAVQVSLLLQEGMAMYGLSHKNILT 287
EGT+G VY R T E +++ + T T+ ++A++ LL+E L+H NI+
Sbjct: 15 EGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE------LNHPNIVK 68
Query: 288 VLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+L V I +L++ + +LK F+ L G+ L + Q++ G+ +
Sbjct: 69 LLDV-IHTENKLYLVFEFLS-MDLKDFMDASALT--GIPLPL----IKSYLFQLLQGLAF 120
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESL 406
+N +++ + I++ D LAR P + +E + + A E L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX---HEVVTLWYRAPEIL 177
Query: 407 VH-KTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ K +STA D+W+ G + E+ T F + + +R+ + + PDE+
Sbjct: 178 LGCKYYSTAVDIWSLGCIFAEMVTRRAL-------FPGDSEIDQLFRIFRTLGTPDEV-- 228
Query: 466 VMAYCWAMNPEGRPTFPQ 483
V +M P+ +P+FP+
Sbjct: 229 VWPGVTSM-PDYKPSFPK 245
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
Query: 362 NCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFG 421
N +D K +++ D LAR + D + P +++ E + +++ SD+W+ G
Sbjct: 146 NVFLDGKQNVKLGDFGLAR-ILNHDEDFAKEFVGTPY-YMSPEQMNRMSYNEKSDIWSLG 203
Query: 422 VLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
LL+EL L P+ E+A +++G P DEL ++ + RP+
Sbjct: 204 CLLYELCALM-PPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSV 262
Query: 482 PQL 484
++
Sbjct: 263 EEI 265
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 362 NCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFG 421
N +D K +++ D LAR + D P +++ E + +++ SD+W+ G
Sbjct: 146 NVFLDGKQNVKLGDFGLAR-ILNHDTSFAKTFVGTPY-YMSPEQMNRMSYNEKSDIWSLG 203
Query: 422 VLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
LL+EL L P+ E+A +++G P DEL ++ + RP+
Sbjct: 204 CLLYELCAL-MPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSV 262
Query: 482 PQL 484
++
Sbjct: 263 EEI 265
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 362 NCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFG 421
N +D K +++ D LAR + D P +++ E + +++ SD+W+ G
Sbjct: 146 NVFLDGKQNVKLGDFGLAR-ILNHDTSFAKAFVGTPY-YMSPEQMNRMSYNEKSDIWSLG 203
Query: 422 VLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
LL+EL L P+ E+A +++G P DEL ++ + RP+
Sbjct: 204 CLLYELCAL-MPPFTAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSV 262
Query: 482 PQL 484
++
Sbjct: 263 EEI 265
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD LA+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D++ IQ+TD A+ + + G E
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 190
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/88 (23%), Positives = 44/88 (50%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P ++ +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ S +SD+WA G ++++L
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQL 227
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + + G E
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE--- 224
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 225 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 224
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 225 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDG 450
+LA E ++ K ++ A D WA GVL++E+ P+ +P ++ + G
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADEPIQIYEKIVSG 253
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 18/155 (11%)
Query: 285 ILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
LT L S +D+++ +++ Y + L++ E A Q I++
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ--------IVLT 154
Query: 345 VQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIE 404
+Y N ++D + I++TD A+ + + G E +LA E
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPE 209
Query: 405 SLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
++ K ++ A D WA GVL++E+ A QP
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 196
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 196
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 18/155 (11%)
Query: 285 ILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
LT L S +D+++ +++ Y + L++ E A Q I++
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ--------IVLT 154
Query: 345 VQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIE 404
+Y N ++D + I++TD A+ + + G E +LA E
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPE 209
Query: 405 SLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
++ K ++ A D WA GVL++E+ A QP
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 224
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 225 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 198
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 64/155 (41%), Gaps = 18/155 (11%)
Query: 285 ILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
LT L S +D+++ +++ Y + L++ E A Q I++
Sbjct: 103 FLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ--------IVLT 154
Query: 345 VQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIE 404
+Y N ++D + I++TD A+ + + G E +LA E
Sbjct: 155 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPE 209
Query: 405 SLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
++ K ++ A D WA GVL++E+ A QP
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----- 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + I++TD LA+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 18/210 (8%)
Query: 224 VRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHK 283
VRL + EG+FG+ TE DG + V+ + S+ + +E + + H
Sbjct: 27 VRLQKIG-EGSFGKAILVKSTE-DG-RQYVIKEINISRMSSKEREESRREVAVLANMKHP 83
Query: 284 NILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIM 343
NI+ S E++ S +++ Y + +L + + K GV +++D +QI +
Sbjct: 84 NIVQYRE-SFEENGSLYIVMDYCEGGDLFKRINAQK----GV--LFQEDQILDWFVQICL 136
Query: 344 GVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPS---DYHCLGDNENRPVKW 400
+++ ++N + +Q+ D +AR L + C+G P +
Sbjct: 137 ALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGT----PY-Y 191
Query: 401 LAIESLVHKTFSTASDVWAFGVLLWELTTL 430
L+ E +K ++ SD+WA G +L+EL TL
Sbjct: 192 LSPEICENKPYNNKSDIWALGCVLYELCTL 221
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----- 189
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 31/208 (14%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G FG V+ EE E ++KT+ + S V + + E + L H NI+ + V
Sbjct: 33 GAFGDVH---LVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV- 88
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCK--------LCPEGVAHTLTTQEVVDMCLQIIMG 344
++DY N+ ++ C+ + + L+ V ++ Q++
Sbjct: 89 ------------FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNA 136
Query: 345 VQYXXXXXXXXXXXATRNCVVDD---KLRIQITDNALARDLFPSDYHCLGDNENRPVKWL 401
+ Y N + D I+I D LA +LF SD H N ++
Sbjct: 137 LAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA-ELFKSDEHST--NAAGTALYM 193
Query: 402 AIESLVHKTFSTASDVWAFGVLLWELTT 429
A E + + + D+W+ GV+++ L T
Sbjct: 194 APE-VFKRDVTFKCDIWSAGVVMYFLLT 220
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 123/325 (37%), Gaps = 72/325 (22%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT--DNASAVQVSLLL 271
L + T+ R ++ L +G +G V+RG++ E+ V VK + D S + + L
Sbjct: 30 LVQRTVAR-QITLLECVGKGRYGEVWRGSWQGEN-----VAVKIFSSRDEKSWFRETELY 83
Query: 272 QEGMAMYGLSHKNILTVLG---VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT 328
M L H+NIL + S T +LI Y + +L +LQ
Sbjct: 84 NTVM----LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ------------ 127
Query: 329 LTTQEVVDMCLQIIMGVQYXXXX------------XXXXXXXATRNCVVDDKLRIQITDN 376
LTT + V CL+I++ + ++N +V + I D
Sbjct: 128 LTTLDTVS-CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADL 186
Query: 377 ALARDLFPSDYHC-LGDNENRPVKWLAIESLVHKTFST-------ASDVWAFGVLLWELT 428
LA S +G+N K ++ +T D+WAFG++LWE+
Sbjct: 187 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
Query: 429 TLA---------QQPYAEIDPFEMAASLQDGYRL----NQPVNCPDELFS---------V 466
+ P+ ++ P + S +D ++ Q N P+ FS +
Sbjct: 247 RRMVSNGIVEDYKPPFYDVVPND--PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKL 304
Query: 467 MAYCWAMNPEGRPTFPQLHSCLQEF 491
M CW NP R T ++ L +
Sbjct: 305 MKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + I++TD A+ + + G E
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 204
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-- 204
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 ---LAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 114/305 (37%), Gaps = 67/305 (21%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG- 290
+G +G V+RG++ E+ V + + D S + + L M L H+NIL +
Sbjct: 18 KGRYGEVWRGSWQGENVA---VKIFSSRDEKSWFRETELYNTVM----LRHENILGFIAS 70
Query: 291 --VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
S T +LI Y + +L +LQ LTT + V CL+I++ +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------------LTTLDTVS-CLRIVLSIASG 117
Query: 349 XXX------------XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC-LGDNEN 395
++N +V + I D LA S +G+N
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 396 RPVKWLAIESLVHKTFST-------ASDVWAFGVLLWELTTLA---------QQPYAEID 439
K ++ +T D+WAFG++LWE+ + P+ ++
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 440 PFEMAASLQDGYRL----NQPVNCPDELFS---------VMAYCWAMNPEGRPTFPQLHS 486
P + S +D ++ Q N P+ FS +M CW NP R T ++
Sbjct: 238 PND--PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
Query: 487 CLQEF 491
L +
Sbjct: 296 TLTKI 300
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + I++TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++++ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + I++TD A+ + + G E
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE--- 203
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/305 (21%), Positives = 114/305 (37%), Gaps = 67/305 (21%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG- 290
+G +G V+RG++ E+ V + + D S + + L M L H+NIL +
Sbjct: 18 KGRYGEVWRGSWQGENVA---VKIFSSRDEKSWFRETELYNTVM----LRHENILGFIAS 70
Query: 291 --VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
S T +LI Y + +L +LQ LTT + V CL+I++ +
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------------LTTLDTVS-CLRIVLSIASG 117
Query: 349 XXX------------XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHC-LGDNEN 395
++N +V + I D LA S +G+N
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 396 RPVKWLAIESLVHKTFST-------ASDVWAFGVLLWELTTLA---------QQPYAEID 439
K ++ +T D+WAFG++LWE+ + P+ ++
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVV 237
Query: 440 PFEMAASLQDGYRL----NQPVNCPDELFS---------VMAYCWAMNPEGRPTFPQLHS 486
P + S +D ++ Q N P+ FS +M CW NP R T ++
Sbjct: 238 PND--PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK 295
Query: 487 CLQEF 491
L +
Sbjct: 296 TLTKI 300
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 43/88 (48%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P ++ +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQL 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 43/90 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P ++ +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY 387
LT E QI++G QY N +++ L ++I D LA + +Y
Sbjct: 111 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EY 167
Query: 388 HCLGDNENRPV-----KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE 442
D E + V ++A E L K S DVW+ G +++ T L +P PFE
Sbjct: 168 ----DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY--TLLVGKP-----PFE 216
Query: 443 MAASLQDGYRLNQ-----PVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ + R+ + P + S++ +P RPT +L
Sbjct: 217 TSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL 263
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 23/199 (11%)
Query: 293 IEDHTSPFLI---YPYQDYTNLK---RFLQKCKLCPEGVAHTLTTQEVVDMCL-QIIMGV 345
+ D PF++ Y +Q L FL+ L + T+E V L ++ +G+
Sbjct: 84 LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGL 143
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP------VK 399
+ N ++D++ I++TD L+++ D+E + V+
Sbjct: 144 DHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAI--------DHEKKAYSFCGTVE 195
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNC 459
++A E + + S ++D W++GVL++E+ T P+ D E + +L P
Sbjct: 196 YMAPEVVNRQGHSHSADWWSYGVLMFEMLT-GSLPFQGKDRKETMTLILKA-KLGMPQFL 253
Query: 460 PDELFSVMAYCWAMNPEGR 478
E S++ + NP R
Sbjct: 254 STEAQSLLRALFKRNPANR 272
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 221 RCRVRLFSVNM-----EGTFGRVYRGTYTEEDGVEE----EVLVKTVTDNASAVQVSLLL 271
R R++L N +G+FG+V +E G +E ++L K V V+ +++
Sbjct: 335 RDRMKLTDFNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 391
Query: 272 QEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTT 331
+ +A+ G LT L + + + Y + +L +Q+ E A
Sbjct: 392 KRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----- 444
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR----DLFPSDY 387
V +I +G+ + N ++D + I+I D + + D +
Sbjct: 445 ---VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX 501
Query: 388 HCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL 447
C + ++A E + ++ + + D WAFGVLL+E+ Q P+ D E+ S+
Sbjct: 502 FCGTPD------YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSI 554
Query: 448 QD 449
+
Sbjct: 555 ME 556
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQL 228
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 107/269 (39%), Gaps = 34/269 (12%)
Query: 223 RVRLFSVNM-----EGTFGRVYRGTYTEEDGVEE----EVLVKTVTDNASAVQVSLLLQE 273
RV+L N +G+FG+V + G EE ++L K V V+ +++ +
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKV---MLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKR 71
Query: 274 GMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQE 333
+A+ L LT L + + + Y + +L +Q+ +
Sbjct: 72 VLAL--LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG--------KFKEPQ 121
Query: 334 VVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDN 393
V +I +G+ + N ++D + I+I D + ++ H +
Sbjct: 122 AVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKE------HMMDGV 175
Query: 394 ENRPV----KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
R ++A E + ++ + + D WA+GVLL+E+ Q P+ D E+ S+ +
Sbjct: 176 TTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIME 234
Query: 450 GYRLNQPVNCPDELFSVMAYCWAMNPEGR 478
+ ++ P + E S+ +P R
Sbjct: 235 -HNVSYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY 387
LT E QI++G QY N +++ L ++I D LA + +Y
Sbjct: 135 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EY 191
Query: 388 HCLGDNENRPV-----KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE 442
D E + V ++A E L K S DVW+ G +++ T L +P PFE
Sbjct: 192 ----DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY--TLLVGKP-----PFE 240
Query: 443 MAASLQDGYRLNQ-----PVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ + R+ + P + S++ +P RPT +L
Sbjct: 241 TSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL 287
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQL 227
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 67/167 (40%), Gaps = 24/167 (14%)
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY 387
LT E QI++G QY N +++ L ++I D LA + +Y
Sbjct: 137 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EY 193
Query: 388 HCLGDNENRPV-----KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE 442
D E + V ++A E L K S DVW+ G +++ T L +P PFE
Sbjct: 194 ----DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY--TLLVGKP-----PFE 242
Query: 443 MAASLQDGYRLNQ-----PVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ + R+ + P + S++ +P RPT +L
Sbjct: 243 TSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL 289
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 46/315 (14%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT--DNASAVQVSLLL 271
L + TI R V S+ +G FG V+RG + E EV VK + + S + + +
Sbjct: 35 LVQRTIARTIVLQESIG-KGRFGEVWRGKWRGE-----EVAVKIFSSREERSWFREAEIY 88
Query: 272 QEGMAMYGLSHKNILTVLGVSIEDH---TSPFLIYPYQDYTNLKRFLQKCKLCPEG-VAH 327
Q M L H+NIL + +D+ T +L+ Y ++ +L +L + + EG +
Sbjct: 89 QTVM----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL 144
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA-RDLFPSD 386
L+T + I+G Q ++N +V I D LA R +D
Sbjct: 145 ALSTASGLAHLHMEIVGTQ--GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 202
Query: 387 YHCLGDNENRPVK-WLAIE----SLVHKTFST--ASDVWAFGVLLWELTTLA-------- 431
+ N K ++A E S+ K F + +D++A G++ WE+
Sbjct: 203 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 262
Query: 432 -QQPYAEIDPFEMAASLQDGYRLNQPV--NCPDELFS---------VMAYCWAMNPEGRP 479
Q PY ++ P + + Q + N P+ S +M CW N R
Sbjct: 263 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 322
Query: 480 TFPQLHSCLQEFHAQ 494
T ++ L + Q
Sbjct: 323 TALRIKKTLSQLSQQ 337
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/88 (22%), Positives = 42/88 (47%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQ 197
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWEL 427
+++ E L K+ +SD+WA G ++++L
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQL 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
+I+ ++Y N ++++ + IQITD A+ L P + +
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT 429
+++ E L K+ +SD+WA G ++++L
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + IQ+TD A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 33/242 (13%)
Query: 221 RCRVRLFSVNM-----EGTFGRVYRGTYTEEDGVEE----EVLVKTVTDNASAVQVSLLL 271
R R++L N +G+FG+V +E G +E ++L K V V+ +++
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKV---MLSERKGTDELYAVKILKKDVVIQDDDVECTMVE 70
Query: 272 QEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTT 331
+ +A+ G LT L + + + Y + +L +Q+ E A
Sbjct: 71 KRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----- 123
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALAR----DLFPSDY 387
V +I +G+ + N ++D + I+I D + + D +
Sbjct: 124 ---VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKX 180
Query: 388 HCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASL 447
C + ++A E + ++ + + D WAFGVLL+E+ Q P+ D E+ S+
Sbjct: 181 FCGTPD------YIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSI 233
Query: 448 QD 449
+
Sbjct: 234 ME 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 18/155 (11%)
Query: 285 ILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
L L S +D+++ +++ Y ++ L++ E A Q I++
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ--------IVLT 153
Query: 345 VQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIE 404
+Y N ++D + I++ D A+ + + G E +LA E
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAPE 208
Query: 405 SLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
++ K ++ A D WA GVL++E+ A QP
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/155 (21%), Positives = 63/155 (40%), Gaps = 18/155 (11%)
Query: 285 ILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMG 344
L L S +D+++ +++ Y ++ L++ E A Q I++
Sbjct: 102 FLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ--------IVLT 153
Query: 345 VQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIE 404
+Y N ++D + I++ D A+ + + G E +LA E
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAPE 208
Query: 405 SLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
++ K ++ A D WA GVL++E+ A QP
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 102/261 (39%), Gaps = 27/261 (10%)
Query: 250 EEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYT 309
+E+V +K + + LL+E AM H NI++ S +L+
Sbjct: 35 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY-TSFVVKDELWLVMKLLSGG 93
Query: 310 NLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKL 369
++ ++ E + L + + +++ G++Y N ++ +
Sbjct: 94 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG 153
Query: 370 RIQITDNALARDLFPSDYHCLGDNENRPVK--------WLAIESLVH-KTFSTASDVWAF 420
+QI D ++ L GD V+ W+A E + + + +D+W+F
Sbjct: 154 SVQIADFGVSAFLATG-----GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 208
Query: 421 GVLLWELTTLAQQPYAEIDPFEM--------AASLQDGYRLNQPVNCPDELFSVM-AYCW 471
G+ EL T A PY + P ++ SL+ G + + + + F M + C
Sbjct: 209 GITAIELATGA-APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCL 267
Query: 472 AMNPEGRPTFPQL--HSCLQE 490
+PE RPT +L H Q+
Sbjct: 268 QKDPEKRPTAAELLRHKFFQK 288
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 125/315 (39%), Gaps = 46/315 (14%)
Query: 214 LSELTIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT--DNASAVQVSLLL 271
L + TI R V S+ +G FG V+RG + E EV VK + + S + + +
Sbjct: 22 LVQRTIARTIVLQESIG-KGRFGEVWRGKWRGE-----EVAVKIFSSREERSWFREAEIY 75
Query: 272 QEGMAMYGLSHKNILTVLGVSIEDH---TSPFLIYPYQDYTNLKRFLQKCKLCPEG-VAH 327
Q M L H+NIL + +D+ T +L+ Y ++ +L +L + + EG +
Sbjct: 76 QTVM----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKL 131
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA-RDLFPSD 386
L+T + I+G Q ++N +V I D LA R +D
Sbjct: 132 ALSTASGLAHLHMEIVGTQ--GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATD 189
Query: 387 YHCLGDNENRPVK-WLAIE----SLVHKTFST--ASDVWAFGVLLWELTTLA-------- 431
+ N K ++A E S+ K F + +D++A G++ WE+
Sbjct: 190 TIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 249
Query: 432 -QQPYAEIDPFEMAASLQDGYRLNQPV--NCPDELFS---------VMAYCWAMNPEGRP 479
Q PY ++ P + + Q + N P+ S +M CW N R
Sbjct: 250 YQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARL 309
Query: 480 TFPQLHSCLQEFHAQ 494
T ++ L + Q
Sbjct: 310 TALRIKKTLSQLSQQ 324
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 102/261 (39%), Gaps = 27/261 (10%)
Query: 250 EEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYT 309
+E+V +K + + LL+E AM H NI++ S +L+
Sbjct: 40 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY-TSFVVKDELWLVMKLLSGG 98
Query: 310 NLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKL 369
++ ++ E + L + + +++ G++Y N ++ +
Sbjct: 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDG 158
Query: 370 RIQITDNALARDLFPSDYHCLGDNENRPVK--------WLAIESLVH-KTFSTASDVWAF 420
+QI D ++ L GD V+ W+A E + + + +D+W+F
Sbjct: 159 SVQIADFGVSAFLATG-----GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSF 213
Query: 421 GVLLWELTTLAQQPYAEIDPFEM--------AASLQDGYRLNQPVNCPDELFSVM-AYCW 471
G+ EL T A PY + P ++ SL+ G + + + + F M + C
Sbjct: 214 GITAIELATGA-APYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCL 272
Query: 472 AMNPEGRPTFPQL--HSCLQE 490
+PE RPT +L H Q+
Sbjct: 273 QKDPEKRPTAAELLRHKFFQK 293
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 10/102 (9%)
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP 397
QI++ +Y N ++D + I++ D A+ + + G E
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE--- 204
Query: 398 VKWLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 205 --YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 10/100 (10%)
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVK 399
QI++ +Y N ++D + I++ D A+ + + G E
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----- 203
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTT-----LAQQP 434
+LA E ++ K ++ A D WA GVL++E+ A QP
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/153 (20%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 280 LSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT-LTTQEVVDMC 338
LSH+NI++++ V ED +L+ Y + L +++ +H L+ ++
Sbjct: 68 LSHQNIVSMIDVDEEDDCY-YLVMEYIEGPTLSEYIE---------SHGPLSVDTAINFT 117
Query: 339 LQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY----HCLGDNE 394
QI+ G+++ +N ++D ++I D +A+ L + H LG
Sbjct: 118 NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG--- 174
Query: 395 NRPVKWLAIESLVHKTFSTASDVWAFGVLLWEL 427
V++ + E + +D+++ G++L+E+
Sbjct: 175 --TVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 46/311 (14%)
Query: 218 TIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT--DNASAVQVSLLLQEGM 275
TI R V S+ +G FG V+RG + E EV VK + + S + + + Q M
Sbjct: 3 TIARTIVLQESIG-KGRFGEVWRGKWRGE-----EVAVKIFSSREERSWFREAEIYQTVM 56
Query: 276 AMYGLSHKNILTVLGVSIEDH---TSPFLIYPYQDYTNLKRFLQKCKLCPEG-VAHTLTT 331
L H+NIL + +D+ T +L+ Y ++ +L +L + + EG + L+T
Sbjct: 57 ----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 112
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA-RDLFPSDYHCL 390
+ I+G Q ++N +V I D LA R +D +
Sbjct: 113 ASGLAHLHMEIVGTQ--GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 170
Query: 391 GDNENRPVK-WLAIE----SLVHKTFST--ASDVWAFGVLLWELTTLA---------QQP 434
N K ++A E S+ K F + +D++A G++ WE+ Q P
Sbjct: 171 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 230
Query: 435 YAEIDPFEMAASLQDGYRLNQPV--NCPDELFS---------VMAYCWAMNPEGRPTFPQ 483
Y ++ P + + Q + N P+ S +M CW N R T +
Sbjct: 231 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 290
Query: 484 LHSCLQEFHAQ 494
+ L + Q
Sbjct: 291 IKKTLSQLSQQ 301
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 46/311 (14%)
Query: 218 TIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT--DNASAVQVSLLLQEGM 275
TI R V S+ +G FG V+RG + E EV VK + + S + + + Q M
Sbjct: 6 TIARTIVLQESIG-KGRFGEVWRGKWRGE-----EVAVKIFSSREERSWFREAEIYQTVM 59
Query: 276 AMYGLSHKNILTVLGVSIEDH---TSPFLIYPYQDYTNLKRFLQKCKLCPEG-VAHTLTT 331
L H+NIL + +D+ T +L+ Y ++ +L +L + + EG + L+T
Sbjct: 60 ----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 115
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA-RDLFPSDYHCL 390
+ I+G Q ++N +V I D LA R +D +
Sbjct: 116 ASGLAHLHMEIVGTQ--GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 173
Query: 391 GDNENRPVK-WLAIE----SLVHKTFST--ASDVWAFGVLLWELTTLA---------QQP 434
N K ++A E S+ K F + +D++A G++ WE+ Q P
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 233
Query: 435 YAEIDPFEMAASLQDGYRLNQPV--NCPDELFS---------VMAYCWAMNPEGRPTFPQ 483
Y ++ P + + Q + N P+ S +M CW N R T +
Sbjct: 234 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 293
Query: 484 LHSCLQEFHAQ 494
+ L + Q
Sbjct: 294 IKKTLSQLSQQ 304
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 123/311 (39%), Gaps = 46/311 (14%)
Query: 218 TIQRCRVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVT--DNASAVQVSLLLQEGM 275
TI R V S+ +G FG V+RG + E EV VK + + S + + + Q M
Sbjct: 1 TIARTIVLQESIG-KGRFGEVWRGKWRGE-----EVAVKIFSSREERSWFREAEIYQTVM 54
Query: 276 AMYGLSHKNILTVLGVSIEDH---TSPFLIYPYQDYTNLKRFLQKCKLCPEG-VAHTLTT 331
L H+NIL + +D+ T +L+ Y ++ +L +L + + EG + L+T
Sbjct: 55 ----LRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALST 110
Query: 332 QEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA-RDLFPSDYHCL 390
+ I+G Q ++N +V I D LA R +D +
Sbjct: 111 ASGLAHLHMEIVGTQ--GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDI 168
Query: 391 GDNENRPVK-WLAIE----SLVHKTFST--ASDVWAFGVLLWELTTLA---------QQP 434
N K ++A E S+ K F + +D++A G++ WE+ Q P
Sbjct: 169 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 228
Query: 435 YAEIDPFEMAASLQDGYRLNQPV--NCPDELFS---------VMAYCWAMNPEGRPTFPQ 483
Y ++ P + + Q + N P+ S +M CW N R T +
Sbjct: 229 YYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 288
Query: 484 LHSCLQEFHAQ 494
+ L + Q
Sbjct: 289 IKKTLSQLSQQ 299
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 45/297 (15%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVT--DNASAVQVSLLLQEGMAMYGLSHKNILTVL 289
+G FG V+RG + E EV VK + + S + + + Q M L H+NIL +
Sbjct: 13 KGRFGEVWRGKWRGE-----EVAVKIFSSREERSWFREAEIYQTVM----LRHENILGFI 63
Query: 290 GVSIEDH---TSPFLIYPYQDYTNLKRFLQKCKLCPEG-VAHTLTTQEVVDMCLQIIMGV 345
+D+ T +L+ Y ++ +L +L + + EG + L+T + I+G
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALA-RDLFPSDYHCLGDNENRPVK-WLAI 403
Q ++N +V I D LA R +D + N K ++A
Sbjct: 124 Q--GKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAP 181
Query: 404 E----SLVHKTFST--ASDVWAFGVLLWELTTLA---------QQPYAEIDPFEMAASLQ 448
E S+ K F + +D++A G++ WE+ Q PY ++ P + +
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEM 241
Query: 449 DGYRLNQPV--NCPDELFS---------VMAYCWAMNPEGRPTFPQLHSCLQEFHAQ 494
Q + N P+ S +M CW N R T ++ L + Q
Sbjct: 242 RKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 24/167 (14%)
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY 387
LT E QI++G QY N +++ L ++I D LA + +Y
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EY 169
Query: 388 HCLGDNENRPV-----KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE 442
D E + ++A E L K S DVW+ G +++ T L +P PFE
Sbjct: 170 ----DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY--TLLVGKP-----PFE 218
Query: 443 MAASLQDGYRLNQ-----PVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ + R+ + P + S++ +P RPT +L
Sbjct: 219 TSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL 265
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 299 PFLI---YPYQDYTNLK---RFLQKCKLCPEGVAHTLTTQEVVDMCL-QIIMGVQYXXXX 351
PF++ Y +Q L FL+ L + T+E V L ++ + + +
Sbjct: 87 PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL 146
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP------VKWLAIES 405
N ++D++ I++TD L+++ D+E + V+++A E
Sbjct: 147 GIIYRDLKPENILLDEEGHIKLTDFGLSKESI--------DHEKKAYSFCGTVEYMAPEV 198
Query: 406 LVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS 465
+ + + ++D W+FGVL++E+ T P+ D E + +L P E S
Sbjct: 199 VNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKA-KLGMPQFLSPEAQS 256
Query: 466 VMAYCWAMNPEGR 478
++ + NP R
Sbjct: 257 LLRMLFKRNPANR 269
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 24/167 (14%)
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY 387
LT E QI++G QY N +++ L ++I D LA + +Y
Sbjct: 113 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EY 169
Query: 388 HCLGDNENRPV-----KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE 442
D E + ++A E L K S DVW+ G +++ T L +P PFE
Sbjct: 170 ----DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY--TLLVGKP-----PFE 218
Query: 443 MAASLQDGYRLNQ-----PVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ + R+ + P + S++ +P RPT +L
Sbjct: 219 TSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL 265
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EGT+G VY+ + + E L K + S ++E + L H NI+ + V
Sbjct: 12 EGTYGVVYKA---QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
I L++ + D +LK+ L C EG ++T + + LQ++ G+ Y
Sbjct: 69 -IHTKKRLVLVFEHLD-QDLKKLLDVC----EGGLESVTAKSFL---LQLLNGIAYCHDR 119
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESLV-HK 409
+N +++ + ++I D LAR P + +E + + A + L+ K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT---HEVVTLWYRAPDVLMGSK 176
Query: 410 TFSTASDVWAFGVLLWELTTLA 431
+ST D+W+ G + E+ A
Sbjct: 177 KYSTTIDIWSVGCIFAEMVNGA 198
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 362 NCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP------VKWLAIESLVHKTFSTAS 415
N ++D++ I++TD L+++ D+E + V+++A E + + + ++
Sbjct: 156 NILLDEEGHIKLTDFGLSKESI--------DHEKKAYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 416 DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNP 475
D W+FGVL++E+ T P+ D E + +L P E S++ + NP
Sbjct: 208 DWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKA-KLGMPQFLSPEAQSLLRMLFKRNP 265
Query: 476 EGR 478
R
Sbjct: 266 ANR 268
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
GT+ VY+G + GV V +K V ++ S ++E M L H+NI+ + V
Sbjct: 16 GTYATVYKG-LNKTTGVY--VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDV- 71
Query: 293 IEDHTSPFLIYPYQDYTNLKRFLQKCKL--CPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
I L++ + D +LK+++ + P G+ L V Q++ G+ +
Sbjct: 72 IHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNL----VKYFQWQLLQGLAFCHE 126
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALAR------DLFPSDYHCLGDNENRPVKWLAIE 404
+N +++ + ++++ D LAR + F S+ L W
Sbjct: 127 NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTL---------WYRAP 177
Query: 405 SLV--HKTFSTASDVWAFGVLLWELTT 429
++ +T+ST+ D+W+ G +L E+ T
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMIT 204
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 24/167 (14%)
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY 387
LT E QI++G QY N +++ L ++I D LA + +Y
Sbjct: 117 ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV---EY 173
Query: 388 HCLGDNENRPV-----KWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFE 442
D E + ++A E L K S DVW+ G +++ T L +P PFE
Sbjct: 174 ----DGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY--TLLVGKP-----PFE 222
Query: 443 MAASLQDGYRLNQ-----PVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ + R+ + P + S++ +P RPT +L
Sbjct: 223 TSCLKETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINEL 269
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 30/243 (12%)
Query: 251 EEVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQD 307
+EV VK + N+S++Q L +E M L+H NI+ + V IE + +L+ Y
Sbjct: 40 KEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 308 YTNLKRFLQKCKLCPEGVAH-TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 97 GGEVFDYL---------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 367 DKLRIQITDNALARDL-FPS--DYHCLGDNENRPVKWLAIESLVHKTFSTAS-DVWAFGV 422
+ I+I D + + F + D C P + A E K + DVW+ GV
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFC-----GSP-PYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 423 LLWELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+L+ L + P+ + E+ + G YR+ P + +++ +NP R T
Sbjct: 202 ILYTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 482 PQL 484
Q+
Sbjct: 259 EQI 261
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 362 NCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRP------VKWLAIESLVHKTFSTAS 415
N ++D++ I++TD L+++ D+E + V+++A E + + + ++
Sbjct: 156 NILLDEEGHIKLTDFGLSKESI--------DHEKKAYSFCGTVEYMAPEVVNRRGHTQSA 207
Query: 416 DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAYCWAMNP 475
D W+FGVL++E+ T P+ D E + +L P E S++ + NP
Sbjct: 208 DWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKA-KLGMPQFLSPEAQSLLRMLFKRNP 265
Query: 476 EGR 478
R
Sbjct: 266 ANR 268
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 30/243 (12%)
Query: 251 EEVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQD 307
+EV VK + N+S++Q L +E M L+H NI+ + V IE + +L+ Y
Sbjct: 40 KEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 308 YTNLKRFLQKCKLCPEGVAH-TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 97 GGEVFDYL---------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 367 DKLRIQITDNALARDL-FPS--DYHCLGDNENRPVKWLAIESLVHKTFSTAS-DVWAFGV 422
+ I+I D + + F + D C P + A E K + DVW+ GV
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFC-----GSP-PYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 423 LLWELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+L+ L + P+ + E+ + G YR+ P + +++ +NP R T
Sbjct: 202 ILYTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 482 PQL 484
Q+
Sbjct: 259 EQI 261
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EGT+G VY+ + + E L K + S ++E + L H NI+ + V
Sbjct: 12 EGTYGVVYKA---QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
I L++ + D +LK+ L C EG ++T + + LQ++ G+ Y
Sbjct: 69 -IHTKKRLVLVFEHLD-QDLKKLLDVC----EGGLESVTAKSFL---LQLLNGIAYCHDR 119
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESLV-HK 409
+N +++ + ++I D LAR P + +E + + A + L+ K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT---HEVVTLWYRAPDVLMGSK 176
Query: 410 TFSTASDVWAFGVLLWEL 427
+ST D+W+ G + E+
Sbjct: 177 KYSTTIDIWSVGCIFAEM 194
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 87/198 (43%), Gaps = 17/198 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EGT+G VY+ + + E L K + S ++E + L H NI+ + V
Sbjct: 12 EGTYGVVYKA---QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
I L++ + D +LK+ L C EG ++T + + LQ++ G+ Y
Sbjct: 69 -IHTKKRLVLVFEHLD-QDLKKLLDVC----EGGLESVTAKSFL---LQLLNGIAYCHDR 119
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESLV-HK 409
+N +++ + ++I D LAR P + +E + + A + L+ K
Sbjct: 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYT---HEIVTLWYRAPDVLMGSK 176
Query: 410 TFSTASDVWAFGVLLWEL 427
+ST D+W+ G + E+
Sbjct: 177 KYSTTIDIWSVGCIFAEM 194
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 30/243 (12%)
Query: 251 EEVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQD 307
+EV VK + N+S++Q L +E M L+H NI+ + V IE + +L+ Y
Sbjct: 40 KEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 308 YTNLKRFLQKCKLCPEGVAH-TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 97 GGEVFDYL---------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 367 DKLRIQITDNALARDL-FPS--DYHCLGDNENRPVKWLAIESLVHKTFSTAS-DVWAFGV 422
+ I+I D + + F + D C P + A E K + DVW+ GV
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDAFC-----GAP-PYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 423 LLWELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+L+ L + P+ + E+ + G YR+ P + +++ +NP R T
Sbjct: 202 ILYTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 482 PQL 484
Q+
Sbjct: 259 EQI 261
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 18/204 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVT-DNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EGT+G V++ E E V +K V D+ S L+E + L HKNI+ +
Sbjct: 12 EGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
V D L++ + D +LK++ C L + V Q++ G+ +
Sbjct: 69 VLHSDKKLT-LVFEFCD-QDLKKYFDSCN-------GDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH-- 408
+N +++ +++ D LAR F C + W ++
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLAR-AFGIPVRCY--SAEVVTLWYRPPDVLFGA 176
Query: 409 KTFSTASDVWAFGVLLWELTTLAQ 432
K +ST+ D+W+ G + EL A+
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAAR 200
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/267 (19%), Positives = 104/267 (38%), Gaps = 18/267 (6%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
G F VYR DGV + + D A + ++E + L+H N++
Sbjct: 43 GQFSEVYRAA-CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF 101
Query: 293 IEDHTSPFLIYPYQDYTNLKR----FLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYX 348
IED+ ++ D +L R F ++ +L PE + V +Q+ +++
Sbjct: 102 IEDNELN-IVLELADAGDLSRMIKHFKKQKRLIPE--------RTVWKYFVQLCSALEHM 152
Query: 349 XXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH 408
N + +++ D L R F S P +++ E +
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGR-FFSSKTTAAHSLVGTPY-YMSPERIHE 210
Query: 409 KTFSTASDVWAFGVLLWELTTLAQQPYAE-IDPFEMAASLQD-GYRLNQPVNCPDELFSV 466
++ SD+W+ G LL+E+ L Y + ++ + + ++ Y + +EL +
Sbjct: 211 NGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQL 270
Query: 467 MAYCWAMNPEGRPTFPQLHSCLQEFHA 493
+ C +PE RP ++ + HA
Sbjct: 271 VNMCINPDPEKRPDVTYVYDVAKRMHA 297
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 9/161 (5%)
Query: 328 TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDY 387
TLT E+ + + G++Y N +++ + ++ D +A L +D
Sbjct: 121 TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQL--TDX 178
Query: 388 HCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDP----FEM 443
+ W+A E + ++ +D+W+ G+ E+ + PYA+I P F +
Sbjct: 179 MAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE-GKPPYADIHPMRAIFMI 237
Query: 444 AASLQDGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
+ +R +P D + C +PE R T QL
Sbjct: 238 PTNPPPTFR--KPELWSDNFTDFVKQCLVKSPEQRATATQL 276
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 30/243 (12%)
Query: 251 EEVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQD 307
+EV VK + N+S++Q L +E M L+H NI+ + V IE + +L+ Y
Sbjct: 33 KEVAVKIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 89
Query: 308 YTNLKRFLQKCKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 90 GGEVFDYL---------VAHGWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 140
Query: 367 DKLRIQITDNALARDL-FPS--DYHCLGDNENRPVKWLAIESLVHKTFSTAS-DVWAFGV 422
+ I+I D + + F + D C P + A E K + DVW+ GV
Sbjct: 141 ADMNIKIADFGFSNEFTFGNKLDTFC-----GSP-PYAAPELFQGKKYDGPEVDVWSLGV 194
Query: 423 LLWELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+L+ L + P+ + E+ + G YR+ P + +++ +NP R T
Sbjct: 195 ILYTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTL 251
Query: 482 PQL 484
Q+
Sbjct: 252 EQI 254
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 30/243 (12%)
Query: 251 EEVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQD 307
+EV V+ + N+S++Q L +E M L+H NI+ + V IE + +L+ Y
Sbjct: 40 KEVAVRIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 308 YTNLKRFLQKCKLCPEGVAH-TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 97 GGEVFDYL---------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 367 DKLRIQITDNALARDL-FPS--DYHCLGDNENRPVKWLAIESLVHKTFSTAS-DVWAFGV 422
+ I+I D + + F + D C P + A E K + DVW+ GV
Sbjct: 148 ADMNIKIADFGFSNEFTFGNKLDTFC-----GSP-PYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 423 LLWELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+L+ L + P+ + E+ + G YR+ P + +++ +NP R T
Sbjct: 202 ILYTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 482 PQL 484
Q+
Sbjct: 259 EQI 261
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 98/243 (40%), Gaps = 30/243 (12%)
Query: 251 EEVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQD 307
+EV V+ + N+S++Q L +E M L+H NI+ + V IE + +L+ Y
Sbjct: 40 KEVAVRIIDKTQLNSSSLQK--LFREVRIMKVLNHPNIVKLFEV-IETEKTLYLVMEYAS 96
Query: 308 YTNLKRFLQKCKLCPEGVAH-TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVD 366
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 97 GGEVFDYL---------VAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLD 147
Query: 367 DKLRIQITDNALARDLFPSDYHCLGDNENR---PVKWLAIESLVHKTFSTAS-DVWAFGV 422
+ I+I D + + G+ + + A E K + DVW+ GV
Sbjct: 148 ADMNIKIADFGFSNEF------TFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 423 LLWELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTF 481
+L+ L + P+ + E+ + G YR+ P + +++ +NP R T
Sbjct: 202 ILYTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKKFLILNPSKRGTL 258
Query: 482 PQL 484
Q+
Sbjct: 259 EQI 261
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 96/242 (39%), Gaps = 30/242 (12%)
Query: 252 EVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDY 308
EV +K + N +++Q L +E M L+H NI+ + V IE + +LI Y
Sbjct: 42 EVAIKIIDKTQLNPTSLQK--LFREVRIMKILNHPNIVKLFEV-IETEKTLYLIMEYASG 98
Query: 309 TNLKRFLQKCKLCPEGVAH-TLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDD 367
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 99 GEVFDYL---------VAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA 149
Query: 368 KLRIQITDNALARDLFPS---DYHCLGDNENRPVKWLAIESLVHKTFSTAS-DVWAFGVL 423
+ I+I D + + D C P + A E K + DVW+ GV+
Sbjct: 150 DMNIKIADFGFSNEFTVGGKLDAFC-----GAP-PYAAPELFQGKKYDGPEVDVWSLGVI 203
Query: 424 LWELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFP 482
L+ L + P+ + E+ + G YR+ P + +++ +NP R T
Sbjct: 204 LYTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKRFLVLNPIKRGTLE 260
Query: 483 QL 484
Q+
Sbjct: 261 QI 262
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 3/156 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L ++ + +I+ G+ Y N ++ + +++ D +A L +D
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQ 178
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ 448
+ W+A E + + + +D+W+ G+ EL + P++E+ P ++ +
Sbjct: 179 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP 237
Query: 449 DGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
N L + C P RPT +L
Sbjct: 238 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 273
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 97/241 (40%), Gaps = 28/241 (11%)
Query: 252 EVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDY 308
EV +K + N +++Q L +E M L+H NI+ + V IE + +LI Y
Sbjct: 39 EVAIKIIDKTQLNPTSLQK--LFREVRIMKILNHPNIVKLFEV-IETEKTLYLIMEYASG 95
Query: 309 TNLKRFLQKCKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDD 367
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 96 GEVFDYL---------VAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA 146
Query: 368 KLRIQITDNALARDLFPSDYHCLG--DNENRPVKWLAIESLVHKTFSTAS-DVWAFGVLL 424
+ I+I D F +++ G D + A E K + DVW+ GV+L
Sbjct: 147 DMNIKIADFG-----FSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 201
Query: 425 WELTTLAQQPYAEIDPFEMAASLQDG-YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQ 483
+ L + P+ + E+ + G YR+ P + +++ +NP R T Q
Sbjct: 202 YTLVS-GSLPFDGQNLKELRERVLRGKYRI--PFYMSTDCENLLKRFLVLNPIKRGTLEQ 258
Query: 484 L 484
+
Sbjct: 259 I 259
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 406 LVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID-PFEMAASLQDGYRLNQPVN-CPDEL 463
L K +S SD+W+ G+ + EL L + PY PF+ + + P + E
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAIL-RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF 287
Query: 464 FSVMAYCWAMNPEGRPTFPQL 484
+ C N + RPT+P+L
Sbjct: 288 VDFTSQCLKKNSKERPTYPEL 308
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Query: 406 LVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID-PFEMAASLQDGYRLNQPVN-CPDEL 463
L K +S SD+W+ G+ + EL L + PY PF+ + + P + E
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAIL-RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF 243
Query: 464 FSVMAYCWAMNPEGRPTFPQL 484
+ C N + RPT+P+L
Sbjct: 244 VDFTSQCLKKNSKERPTYPEL 264
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 3/156 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L ++ + +I+ G+ Y N ++ + +++ D +A L +D
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQ 158
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ 448
+ W+A E + + + +D+W+ G+ EL + P++E+ P ++ +
Sbjct: 159 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP 217
Query: 449 DGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
N L + C P RPT +L
Sbjct: 218 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 186 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 238
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 239 -----GDI-PFEHDEEIIGGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 288
Query: 486 SCLQE 490
+Q+
Sbjct: 289 PWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 185 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 237
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 238 -----GDI-PFEHDEEIIGGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 287
Query: 486 SCLQE 490
+Q+
Sbjct: 288 PWMQD 292
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 186 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 238
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 239 -----GDI-PFEHDEEIIGGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 288
Query: 486 SCLQE 490
+Q+
Sbjct: 289 PWMQD 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 153 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 205
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 206 -----GDI-PFEHDEEIIGGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 255
Query: 486 SCLQE 490
+Q+
Sbjct: 256 PWMQD 260
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 3/156 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L ++ + +I+ G+ Y N ++ + +++ D +A L +D
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQ 158
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ 448
+ W+A E + + + +D+W+ G+ EL + P++E+ P ++ +
Sbjct: 159 IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP 217
Query: 449 DGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
N L + C P RPT +L
Sbjct: 218 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 253
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 3/156 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L ++ + +I+ G+ Y N ++ + +++ D +A L +D
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQ 173
Query: 389 CLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQ 448
+ W+A E + + + +D+W+ G+ EL + P++E+ P ++ +
Sbjct: 174 IKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP 232
Query: 449 DGYRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
N L + C P RPT +L
Sbjct: 233 KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKEL 268
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 153 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 205
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 206 -----GDI-PFEHDEEIIRGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 255
Query: 486 SCLQE 490
+Q+
Sbjct: 256 PWMQD 260
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 205 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 257
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 258 -----GDI-PFEHDEEIIRGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 307
Query: 486 SCLQE 490
+Q+
Sbjct: 308 PWMQD 312
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 186 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 238
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 239 -----GDI-PFEHDEEIIGGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 288
Query: 486 SCLQE 490
+Q+
Sbjct: 289 PWMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 185 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 237
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 238 -----GDI-PFEHDEEIIGGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 287
Query: 486 SCLQE 490
+Q+
Sbjct: 288 PWMQD 292
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 180 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 232
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 233 -----GDI-PFEHDEEIIRGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 282
Query: 486 SCLQE 490
+Q+
Sbjct: 283 PWMQD 287
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 200 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 252
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 253 -----GDI-PFEHDEEIIRGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 302
Query: 486 SCLQE 490
+Q+
Sbjct: 303 PWMQD 307
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 185 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 237
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 238 -----GDI-PFEHDEEIIGGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 287
Query: 486 SCLQE 490
+Q+
Sbjct: 288 PWMQD 292
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 186 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 238
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 239 -----GDI-PFEHDEEIIGGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 288
Query: 486 SCLQE 490
+Q+
Sbjct: 289 PWMQD 293
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 153 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 205
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 206 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 255
Query: 486 SCLQE 490
+Q+
Sbjct: 256 PWMQD 260
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 78/198 (39%), Gaps = 9/198 (4%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG FG VY+G Y V + L V ++ QE M H+N++ +LG
Sbjct: 35 EGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLGF 92
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S D L+Y Y +L L C +G L+ + G+ +
Sbjct: 93 S-SDGDDLCLVYVYMPNGSLLDRLS----CLDGTP-PLSWHMRCKIAQGAANGINFLHEN 146
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
+ N ++D+ +I+D LAR + ++A E+L
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEAL-RGEI 205
Query: 412 STASDVWAFGVLLWELTT 429
+ SD+++FGV+L E+ T
Sbjct: 206 TPKSDIYSFGVVLLEIIT 223
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 100/275 (36%), Gaps = 22/275 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG FG VY+G Y V + L V ++ QE M H+N++ +LG
Sbjct: 41 EGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLGF 98
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S D L+Y Y +L L C +G L+ + G+ +
Sbjct: 99 S-SDGDDLCLVYVYMPNGSLLDRLS----CLDGTP-PLSWHMRCKIAQGAANGINFLHEN 152
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
+ N ++D+ +I+D LAR + ++A E+L
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEAL-RGEI 211
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDP--------FEMAASLQDGYRLNQPVNCPDE- 462
+ SD+++FGV+L E+ T +P +++ +N D
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 271
Query: 463 ----LFSVMAYCWAMNPEGRPTFPQLHSCLQEFHA 493
++SV + C RP ++ LQE A
Sbjct: 272 SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 156 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 208
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 209 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 258
Query: 486 SCLQE 490
+Q+
Sbjct: 259 PWMQD 263
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 157 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 209
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 210 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 259
Query: 486 SCLQE 490
+Q+
Sbjct: 260 PWMQD 264
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 200 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 252
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 253 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 302
Query: 486 SCLQE 490
+Q+
Sbjct: 303 PWMQD 307
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 172 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 224
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 225 -----GDI-PFEHDEEIIRGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 274
Query: 486 SCLQE 490
+Q+
Sbjct: 275 PWMQD 279
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 173 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 225
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 226 -----GDI-PFEHDEEIIRGQVFFRQRVSXECQ----HLIRWCLALRPSDRPTFEEIQNH 275
Query: 486 SCLQE 490
+Q+
Sbjct: 276 PWMQD 280
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 158 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 210
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 211 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 260
Query: 486 SCLQE 490
+Q+
Sbjct: 261 PWMQD 265
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 157 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 209
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 210 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 259
Query: 486 SCLQE 490
+Q+
Sbjct: 260 PWMQD 264
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 185 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 237
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 238 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 287
Query: 486 SCLQE 490
+Q+
Sbjct: 288 PWMQD 292
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 89/222 (40%), Gaps = 25/222 (11%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG+ G V T E ++V VK + D + LL E + M H N++
Sbjct: 55 EGSTGIVCIAT---EKHTGKQVAVKKM-DLRKQQRRELLFNEVVIMRDYHHDNVV----- 105
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXX 350
D S +L+ + + FL+ L + V HT + +++ +CL ++ + Y
Sbjct: 106 ---DMYSSYLVG--DELWVVMEFLEGGALT-DIVTHTRMNEEQIATVCLSVLRALSYLHN 159
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALARDL---FPSDYHCLGDNENRPVKWLAIESLV 407
+ + ++ RI+++D + P +G W+A E +
Sbjct: 160 QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTP-----YWMAPEVIS 214
Query: 408 HKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
+ T D+W+ G+++ E+ + PY P + ++D
Sbjct: 215 RLPYGTEVDIWSLGIMVIEMID-GEPPYFNEPPLQAMRRIRD 255
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 173 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 225
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 226 -----GDI-PFEHDEEIIRGQVFFRQRVSXECQ----HLIRWCLALRPXDRPTFEEIQNH 275
Query: 486 SCLQE 490
+Q+
Sbjct: 276 PWMQD 280
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 200 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 252
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 253 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 302
Query: 486 SCLQE 490
+Q+
Sbjct: 303 PWMQD 307
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 158 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 210
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 211 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 260
Query: 486 SCLQE 490
+Q+
Sbjct: 261 PWMQD 265
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 158 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 210
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 211 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 260
Query: 486 SCLQE 490
+Q+
Sbjct: 261 PWMQD 265
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 100/275 (36%), Gaps = 22/275 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG FG VY+G Y V + L V ++ QE M H+N++ +LG
Sbjct: 41 EGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVMAKCQHENLVELLGF 98
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S D L+Y Y +L L C +G L+ + G+ +
Sbjct: 99 S-SDGDDLCLVYVYMPNGSLLDRLS----CLDGTP-PLSWHMRCKIAQGAANGINFLHEN 152
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
+ N ++D+ +I+D LAR + ++A E+L
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEAL-RGEI 211
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDP--------FEMAASLQDGYRLNQPVNCPDE- 462
+ SD+++FGV+L E+ T +P +++ +N D
Sbjct: 212 TPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADST 271
Query: 463 ----LFSVMAYCWAMNPEGRPTFPQLHSCLQEFHA 493
++SV + C RP ++ LQE A
Sbjct: 272 SVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 192 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 244
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 245 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 294
Query: 486 SCLQE 490
+Q+
Sbjct: 295 PWMQD 299
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 172 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 224
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 225 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 274
Query: 486 SCLQE 490
+Q+
Sbjct: 275 PWMQD 279
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 371 IQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTL 430
I AL +D +D+ G P +W+ H+ ++ VW+ G+LL+++
Sbjct: 173 IDFGSGALLKDTVYTDFD--GTRVYSPPEWIR----YHRYHGRSAAVWSLGILLYDMVC- 225
Query: 431 AQQPYAEIDPFEMAASLQDG---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--H 485
+I PFE + G +R C ++ +C A+ P RPTF ++ H
Sbjct: 226 -----GDI-PFEHDEEIIRGQVFFRQRVSSECQ----HLIRWCLALRPSDRPTFEEIQNH 275
Query: 486 SCLQE 490
+Q+
Sbjct: 276 PWMQD 280
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/315 (20%), Positives = 122/315 (38%), Gaps = 54/315 (17%)
Query: 217 LTIQRC---RVRLFSVNMEGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQE 273
L +QR ++++ +G +G V+ G + G + V V T+ AS + + + Q
Sbjct: 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTTEEASWFRETEIYQT 85
Query: 274 GMAMYGLSHKNILTVLGVSIE---DHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLT 330
+ + H+NIL + I+ T +LI Y + +L +L+ L + + L
Sbjct: 86 VL----MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLK-LA 140
Query: 331 TQEVVDMCLQIIMGVQYXXXXXXXXXXXATRN---------CVVDDKLRIQITDNALARD 381
V +C ++N C+ D L ++ + D
Sbjct: 141 YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVD 200
Query: 382 LFPSDYHCLGDNENRPVKWLAIESLVHKTFST--ASDVWAFGVLLWELTTLA-------- 431
+ P+ +G P + L ESL F + +D+++FG++LWE+
Sbjct: 201 IPPNTR--VGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEE 257
Query: 432 -QQPYAEIDPFE--------------MAASLQDGYRLNQPVNCPDELFSVMAYCWAMNPE 476
Q PY ++ P + + S + + ++ C ++ +M CWA NP
Sbjct: 258 YQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDE---CLRQMGKLMTECWAHNPA 314
Query: 477 GRPTFPQLHSCLQEF 491
R T ++ L +
Sbjct: 315 SRLTALRVKKTLAKM 329
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Query: 406 LVHKTFSTASDVWAFGVLLWELTTLAQQPYAEID-PFEMAASLQDGYRLNQPVN-CPDEL 463
L K +S SD+W+ G+ EL L + PY PF+ + + P + E
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAIL-RFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEF 270
Query: 464 FSVMAYCWAMNPEGRPTFPQL 484
+ C N + RPT+P+L
Sbjct: 271 VDFTSQCLKKNSKERPTYPEL 291
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 24/186 (12%)
Query: 320 LCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKL---RIQITDN 376
LC +A ++ +V+ + QI+ GV Y +N ++ I+I D
Sbjct: 119 LCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDF 178
Query: 377 ALARDLFPSDYHC-LGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPY 435
++R + + C L + P ++LA E L + +TA+D+W G++ + L T P+
Sbjct: 179 GMSRKI---GHACELREIMGTP-EYLAPEILNYDPITTATDMWNIGIIAYMLLT-HTSPF 233
Query: 436 AEIDPFEMAASLQDGYRLNQPVNCPDELFSVMAY--------CWAMNPEGRPTFP--QLH 485
D E ++ ++N V+ +E FS ++ NPE RPT H
Sbjct: 234 VGEDNQETYLNIS---QVN--VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288
Query: 486 SCLQEF 491
S LQ++
Sbjct: 289 SWLQQW 294
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 35 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 92 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 141
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/204 (20%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 37 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L KC+ L+ + QI+ G++Y
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLL-KCQ--------HLSNDHICYFLYQILRGLKY 143
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 82/204 (40%), Gaps = 18/204 (8%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVT-DNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EGT+G V++ E E V +K V D+ S L+E + L HKNI+ +
Sbjct: 12 EGTYGTVFKAKNRE---THEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
V D L++ + D +LK++ C L + V Q++ G+ +
Sbjct: 69 VLHSDKKLT-LVFEFCD-QDLKKYFDSCN-------GDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVH-- 408
+N +++ +++ + LAR F C + W ++
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLAR-AFGIPVRCY--SAEVVTLWYRPPDVLFGA 176
Query: 409 KTFSTASDVWAFGVLLWELTTLAQ 432
K +ST+ D+W+ G + EL +
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGR 200
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 80/208 (38%), Gaps = 25/208 (12%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV- 291
G FG V R + + E+V +K S E M L+H N+++ V
Sbjct: 26 GGFGYVLRWIHQD---TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLC---PEGVAHTLTTQEVVDMCLQIIMG 344
+ + P L Y + +L+++L + + C EG TL + I
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD--------ISSA 134
Query: 345 VQYXXXXXXXXXXXATRNCVVD---DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWL 401
++Y N V+ +L +I D A++L D L +++L
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYL 191
Query: 402 AIESLVHKTFSTASDVWAFGVLLWELTT 429
A E L K ++ D W+FG L +E T
Sbjct: 192 APELLEQKKYTVTVDYWSFGTLAFECIT 219
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 80/208 (38%), Gaps = 25/208 (12%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV- 291
G FG V R + + E+V +K S E M L+H N+++ V
Sbjct: 25 GGFGYVLRWIHQD---TGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLC---PEGVAHTLTTQEVVDMCLQIIMG 344
+ + P L Y + +L+++L + + C EG TL + I
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSD--------ISSA 133
Query: 345 VQYXXXXXXXXXXXATRNCVVD---DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWL 401
++Y N V+ +L +I D A++L D L +++L
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYL 190
Query: 402 AIESLVHKTFSTASDVWAFGVLLWELTT 429
A E L K ++ D W+FG L +E T
Sbjct: 191 APELLEQKKYTVTVDYWSFGTLAFECIT 218
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 26/186 (13%)
Query: 252 EVLVKTVTD---NASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDY 308
EV VK + N +++Q L +E M L+H NI+ + V IE + +L+ Y
Sbjct: 42 EVAVKIIDKTQLNPTSLQK--LFREVRIMKILNHPNIVKLFEV-IETEKTLYLVMEYASG 98
Query: 309 TNLKRFLQKCKLCPEGVAHT-LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDD 367
+ +L VAH + +E QI+ VQY N ++D
Sbjct: 99 GEVFDYL---------VAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDG 149
Query: 368 KLRIQITDNALARDLFPS---DYHCLGDNENRPVKWLAIESLVHKTFSTAS-DVWAFGVL 423
+ I+I D + + D C P + A E K + DVW+ GV+
Sbjct: 150 DMNIKIADFGFSNEFTVGNKLDTFC-----GSP-PYAAPELFQGKKYDGPEVDVWSLGVI 203
Query: 424 LWELTT 429
L+ L +
Sbjct: 204 LYTLVS 209
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
W+A E + ++T D+W+ G+++ E+ + PY P + L+D
Sbjct: 207 WMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRD 255
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 116/290 (40%), Gaps = 45/290 (15%)
Query: 231 MEGTFGRVY-------RGTYTE----EDGVEEEVLVKTVTDNASAV--QVSLLLQEGMAM 277
+GTF Y +G++ E +D + ++ V + ASA S +L+E +
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
L H NI+ + + +ED +S +++ YT + F + K + + +
Sbjct: 76 KKLDHPNIMKLFEI-LEDSSSFYIVGEL--YTGGELFDEIIK------RKRFSEHDAARI 126
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLR---IQITDNALARDLFPSDYHCLGDNE 394
Q+ G+ Y N +++ K + I+I D L+ C N
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST--------CFQQNT 178
Query: 395 NRPVK-----WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
+ ++A E L T+ DVW+ GV+L+ L + P+ + +++ ++
Sbjct: 179 KMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVET 236
Query: 450 G---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--HSCLQEFHAQ 494
G + L Q D+ ++ +P R T Q H +Q++ ++
Sbjct: 237 GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 58/290 (20%), Positives = 116/290 (40%), Gaps = 45/290 (15%)
Query: 231 MEGTFGRVY-------RGTYTE----EDGVEEEVLVKTVTDNASAV--QVSLLLQEGMAM 277
+GTF Y +G++ E +D + ++ V + ASA S +L+E +
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
L H NI+ + + +ED +S +++ YT + F + K + + +
Sbjct: 76 KKLDHPNIMKLFEI-LEDSSSFYIVGEL--YTGGELFDEIIK------RKRFSEHDAARI 126
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLR---IQITDNALARDLFPSDYHCLGDNE 394
Q+ G+ Y N +++ K + I+I D L+ C N
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST--------CFQQNT 178
Query: 395 NRPVK-----WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
+ ++A E L T+ DVW+ GV+L+ L + P+ + +++ ++
Sbjct: 179 KMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVET 236
Query: 450 G---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL--HSCLQEFHAQ 494
G + L Q D+ ++ +P R T Q H +Q++ ++
Sbjct: 237 GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSE 286
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 35 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGINDI 91
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 92 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 141
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 33 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 139
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 30/172 (17%)
Query: 300 FLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXA 359
F + Y + +L +Q+ + PE A + + I + + Y
Sbjct: 97 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE--------ISLALNYLHERGIIYRDLK 148
Query: 360 TRNCVVDDKLRIQITDNALARD-LFPSD---YHCLGDNENRPVKWLAIESLVHKTFSTAS 415
N ++D + I++TD + ++ L P D C N ++A E L + + +
Sbjct: 149 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN------YIAPEILRGEDYGFSV 202
Query: 416 DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
D WA GVL++E+ A PF++ S N N D LF V+
Sbjct: 203 DWWALGVLMFEMM-------AGRSPFDIVGSSD-----NPDQNTEDYLFQVI 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 37 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDI 93
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 143
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 37 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 143
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 37 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 143
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 203
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 38 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 95 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 144
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIM 204
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 33 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 139
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 30/172 (17%)
Query: 300 FLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXA 359
F + Y + +L +Q+ + PE A + + I + + Y
Sbjct: 82 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE--------ISLALNYLHERGIIYRDLK 133
Query: 360 TRNCVVDDKLRIQITDNALARD-LFPSD---YHCLGDNENRPVKWLAIESLVHKTFSTAS 415
N ++D + I++TD + ++ L P D C N ++A E L + + +
Sbjct: 134 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN------YIAPEILRGEDYGFSV 187
Query: 416 DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
D WA GVL++E+ A PF++ S N N D LF V+
Sbjct: 188 DWWALGVLMFEMM-------AGRSPFDIVGSSD-----NPDQNTEDYLFQVI 227
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 30/172 (17%)
Query: 300 FLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXA 359
F + Y + +L +Q+ + PE A + + I + + Y
Sbjct: 129 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE--------ISLALNYLHERGIIYRDLK 180
Query: 360 TRNCVVDDKLRIQITDNALARD-LFPSDY---HCLGDNENRPVKWLAIESLVHKTFSTAS 415
N ++D + I++TD + ++ L P D C N ++A E L + + +
Sbjct: 181 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN------YIAPEILRGEDYGFSV 234
Query: 416 DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
D WA GVL++E+ A PF++ S N N D LF V+
Sbjct: 235 DWWALGVLMFEMM-------AGRSPFDIVGSSD-----NPDQNTEDYLFQVI 274
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 33 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 139
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 53 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 109
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 110 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 159
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 160 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 35 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 91
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 92 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 141
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 142 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 201
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLS 225
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 30/172 (17%)
Query: 300 FLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXA 359
F + Y + +L +Q+ + PE A + + I + + Y
Sbjct: 86 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAE--------ISLALNYLHERGIIYRDLK 137
Query: 360 TRNCVVDDKLRIQITDNALARD-LFPSD---YHCLGDNENRPVKWLAIESLVHKTFSTAS 415
N ++D + I++TD + ++ L P D C N ++A E L + + +
Sbjct: 138 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN------YIAPEILRGEDYGFSV 191
Query: 416 DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFSVM 467
D WA GVL++E+ A PF++ S N N D LF V+
Sbjct: 192 DWWALGVLMFEMM-------AGRSPFDIVGSSD-----NPDQNTEDYLFQVI 231
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 38 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 94
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 95 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 144
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 145 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 204
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 39 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 95
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 96 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 145
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 146 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 205
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 30 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 86
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 87 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 136
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 137 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 196
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 37 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 143
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 33 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 139
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 31 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 88 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 137
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 31 EGAYGMVC-SAYDNLNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 87
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 88 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 137
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 138 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 197
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLS 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 83/205 (40%), Gaps = 21/205 (10%)
Query: 232 EGTFGRVYRGTYTEEDGVEE-EVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLG 290
EG +G V + D V + V +K ++ L+E + H+N++ +
Sbjct: 53 EGAYGMVS----SAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRD 108
Query: 291 V----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQ 346
+ ++E +++ + T+L + L+ +L + + + L QI+ G++
Sbjct: 109 ILRASTLEAMRDVYIVQDLME-TDLYKLLKSQQLSNDHICYFL---------YQILRGLK 158
Query: 347 YXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESL 406
Y N +++ ++I D LAR P H E +W +
Sbjct: 159 YIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEI 218
Query: 407 V--HKTFSTASDVWAFGVLLWELTT 429
+ K ++ + D+W+ G +L E+ +
Sbjct: 219 MLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|2YGQ|A Chain A, Wif Domain-Epidermal Growth Factor (Egf)-Like Domains 1-3
Of Human Wnt Inhibitory Factor 1 In Complex With
1,2-Dipalmitoylphosphatidylcholine
Length = 324
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 32/68 (47%), Gaps = 6/68 (8%)
Query: 24 ISVESTNKDALINPHLNISSIGSIPTSIQTFSINLPCTGTMNA------EVIVLISINVT 77
+S+ S +K + +P +N+ +G++P + PC G + +VIV+ S T
Sbjct: 73 LSLRSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNT 132
Query: 78 LSRNSNNV 85
+ + N
Sbjct: 133 ILKTPQNA 140
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 41 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 97
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 98 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 147
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 148 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 207
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V +K ++ L+E + H+NI+ + +
Sbjct: 33 EGAYGMVC-SAYDNVNKVR--VAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 89
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 90 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 139
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 140 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 199
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLS 223
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQV-SLLLQEGMAMYGLSHKNILTVLG 290
EGT+G VY+ +D V +K + +A + S ++E + L H NI++++
Sbjct: 31 EGTYGVVYKA----KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
V I L++ + + +LK+ L + K L ++ Q++ GV +
Sbjct: 87 V-IHSERCLTLVFEFME-KDLKKVLDENKT-------GLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESLV-H 408
+N +++ +++ D LAR P + +E + + A + L+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT---HEVVTLWYRAPDVLMGS 194
Query: 409 KTFSTASDVWAFGVLLWELTT 429
K +ST+ D+W+ G + E+ T
Sbjct: 195 KKYSTSVDIWSIGCIFAEMIT 215
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 74/189 (39%), Gaps = 33/189 (17%)
Query: 251 EEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTN 310
E V +K + N + + E A+ L H++I + V +E F++ Y
Sbjct: 36 EMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV-LETANKIFMVLEY----- 89
Query: 311 LKRFLQKCKLCPEG-------VAHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNC 363
CP G L+ +E + QI+ V Y N
Sbjct: 90 ----------CPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENL 139
Query: 364 VVDDKLRIQITDNAL-ARDLFPSDYH---CLGDNENRPVKWLAIESLVHKTF-STASDVW 418
+ D+ ++++ D L A+ DYH C G + + A E + K++ + +DVW
Sbjct: 140 LFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGS-----LAYAAPELIQGKSYLGSEADVW 194
Query: 419 AFGVLLWEL 427
+ G+LL+ L
Sbjct: 195 SMGILLYVL 203
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 9/155 (5%)
Query: 333 EVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGD 392
++ M +I+ G+ Y N ++ ++ +++ D +A L +D +
Sbjct: 121 QIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRN 178
Query: 393 NENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYR 452
W+A E + + + +D+W+ G+ EL + P +++ P + + +
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK-GEPPNSDMHPMRVLFLIP---K 234
Query: 453 LNQPVNCPDELFSVMAY---CWAMNPEGRPTFPQL 484
N P D S + C +P RPT +L
Sbjct: 235 NNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKEL 269
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQV-SLLLQEGMAMYGLSHKNILTVLG 290
EGT+G VY+ +D V +K + +A + S ++E + L H NI++++
Sbjct: 31 EGTYGVVYKA----KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 291 VSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXX 350
V I L++ + + +LK+ L + K L ++ Q++ GV +
Sbjct: 87 V-IHSERCLTLVFEFME-KDLKKVLDENKT-------GLQDSQIKIYLYQLLRGVAHCHQ 137
Query: 351 XXXXXXXXATRNCVVDDKLRIQITDNALARDL-FPSDYHCLGDNENRPVKWLAIESLV-H 408
+N +++ +++ D LAR P + +E + + A + L+
Sbjct: 138 HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYT---HEVVTLWYRAPDVLMGS 194
Query: 409 KTFSTASDVWAFGVLLWELTT 429
K +ST+ D+W+ G + E+ T
Sbjct: 195 KKYSTSVDIWSIGCIFAEMIT 215
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 116/292 (39%), Gaps = 48/292 (16%)
Query: 231 MEGTFGRVY-------RGTYTE----EDGVEEEVLVKTVTDNASAV--QVSLLLQEGMAM 277
+GTF Y +G++ E +D + ++ V + ASA S +L+E +
Sbjct: 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELL 75
Query: 278 YGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDM 337
L H NI+ + + +ED +S +++ YT + F + K + + +
Sbjct: 76 KKLDHPNIMKLFEI-LEDSSSFYIVGEL--YTGGELFDEIIK------RKRFSEHDAARI 126
Query: 338 CLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLR---IQITDNALARDLFPSDYHCLGDNE 394
Q+ G+ Y N +++ K + I+I D L+ C N
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST--------CFQQNT 178
Query: 395 NRPVK-----WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQD 449
+ ++A E L T+ DVW+ GV+L+ L + P+ + +++ ++
Sbjct: 179 KMKDRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVET 236
Query: 450 G---YRLNQPVNCPDELFSVMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRY 498
G + L Q D+ ++ +P R T Q CL+ H + +Y
Sbjct: 237 GKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQ---CLE--HPWIQKY 283
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 232 EGTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
+GTFG+V G Y + +EV++ + A V S +LQ +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQN-------TRHPF 66
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
LT L + + H + Y + L L + ++ E A + I+ +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--------IVSAL 118
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D I+ITD L ++ SD + P ++LA E
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKTFCGTP-EYLAPEV 176
Query: 406 LVHKTFSTASDVWAFGVLLWEL 427
L + A D W GV+++E+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 232 EGTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
+GTFG+V G Y + +EV++ + A V S +LQ +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQN-------TRHPF 66
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
LT L + + H + Y + L L + ++ E A + I+ +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--------IVSAL 118
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D I+ITD L ++ SD + P ++LA E
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTP-EYLAPEV 176
Query: 406 LVHKTFSTASDVWAFGVLLWEL 427
L + A D W GV+++E+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEM 198
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 232 EGTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
+GTFG+V G Y + +EV++ + A V S +LQ +
Sbjct: 18 KGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQN-------TRHPF 69
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
LT L + + H + Y + L L + ++ E A + I+ +
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--------IVSAL 121
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D I+ITD L ++ SD + P ++LA E
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKTFCGTP-EYLAPEV 179
Query: 406 LVHKTFSTASDVWAFGVLLWEL 427
L + A D W GV+++E+
Sbjct: 180 LEDNDYGRAVDWWGLGVVMYEM 201
>pdb|2D3J|A Chain A, Nmr Structure Of The Wif Domain From Human Wif-1
Length = 157
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Query: 24 ISVESTNKDALINPHLNISSIGSIPTSIQTFSINLPCTGTMNA------EVIVLISINVT 77
+S+ S +K + +P +N+ +G++P + PC G + +VIV+ S T
Sbjct: 80 LSLRSLDKGIMADPTVNVPLLGTVPHKASVVQVGFPCLGKQDGVAAFEVDVIVMNSEGNT 139
Query: 78 LSRNSNNVTSLNFKRKKICLR 98
+ + N K CL+
Sbjct: 140 ILQTPQNAIFF-----KTCLQ 155
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 329 LTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYH 388
L+ + QI+ G++Y N +++ ++I D LAR P H
Sbjct: 141 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDH 200
Query: 389 CLGDNENRPVKWLAIESLV--HKTFSTASDVWAFGVLLWELTT 429
E +W ++ K ++ + D+W+ G +L E+ +
Sbjct: 201 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS 243
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 232 EGTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
+GTFG+V G Y + +EV++ + A V S +LQ +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQN-------TRHPF 66
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
LT L + + H + Y + L L + ++ E A + I+ +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--------IVSAL 118
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D I+ITD L ++ SD + P ++LA E
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKTFCGTP-EYLAPEV 176
Query: 406 LVHKTFSTASDVWAFGVLLWEL 427
L + A D W GV+++E+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEM 198
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 232 EGTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
+GTFG+V G Y + +EV++ + A V S +LQ +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQN-------TRHPF 66
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
LT L + + H + Y + L L + ++ E A + I+ +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--------IVSAL 118
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D I+ITD L ++ SD + P ++LA E
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTP-EYLAPEV 176
Query: 406 LVHKTFSTASDVWAFGVLLWEL 427
L + A D W GV+++E+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEM 198
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/204 (19%), Positives = 81/204 (39%), Gaps = 19/204 (9%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG +G V Y + V V ++ ++ L+E + H+NI+ + +
Sbjct: 37 EGAYGMVC-SAYDNLNKVR--VAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDI 93
Query: 292 ----SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
+IE +++ + T+L + L+ L + + + L QI+ G++Y
Sbjct: 94 IRAPTIEQMKDVYIVQDLME-TDLYKLLKTQHLSNDHICYFL---------YQILRGLKY 143
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLV 407
N +++ ++I D LAR P H E +W ++
Sbjct: 144 IHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
Query: 408 --HKTFSTASDVWAFGVLLWELTT 429
K ++ + D+W+ G +L E+ +
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLS 227
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 362 NCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFG 421
N ++DD I+I+D LA + P G V ++A E + ++ ++ + D WA G
Sbjct: 316 NILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGT--VGYMAPEVVKNERYTFSPDWWALG 372
Query: 422 VLLWELTTLAQQPYAE 437
LL+E+ Q P+ +
Sbjct: 373 CLLYEMIA-GQSPFQQ 387
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 362 NCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFG 421
N ++DD I+I+D LA + P G V ++A E + ++ ++ + D WA G
Sbjct: 316 NILLDDHGHIRISDLGLAVHV-PEGQTIKGRVGT--VGYMAPEVVKNERYTFSPDWWALG 372
Query: 422 VLLWELTTLAQQPYAE 437
LL+E+ Q P+ +
Sbjct: 373 CLLYEMIA-GQSPFQQ 387
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 15/201 (7%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
EG FG VY+G Y V + L V ++ QE H+N++ +LG
Sbjct: 32 EGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEELK-QQFDQEIKVXAKCQHENLVELLGF 89
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S D L+Y Y +L L C +G L+ + G+ +
Sbjct: 90 S-SDGDDLCLVYVYXPNGSLLDRLS----CLDGTP-PLSWHXRCKIAQGAANGINFLHEN 143
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPV---KWLAIESLVH 408
+ N ++D+ +I+D LAR S+ +R V + A E+L
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLAR---ASEKFAQXVXXSRIVGTTAYXAPEAL-R 199
Query: 409 KTFSTASDVWAFGVLLWELTT 429
+ SD+++FGV+L E+ T
Sbjct: 200 GEITPKSDIYSFGVVLLEIIT 220
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 17/81 (20%)
Query: 366 DDKLRIQITDNALARDLFPSDYHCLGDNENRPVK-------WLAIESLVHKTFSTASDVW 418
+D L I+I D AR L P D N+P+K + A E L + + D+W
Sbjct: 143 NDNLEIKIIDFGFAR-LKPPD--------NQPLKTPCFTLHYAAPELLNQNGYDESCDLW 193
Query: 419 AFGVLLWELTTLAQQPYAEID 439
+ GV+L+ + + Q P+ D
Sbjct: 194 SLGVILYTMLS-GQVPFQSHD 213
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 53/275 (19%), Positives = 99/275 (36%), Gaps = 37/275 (13%)
Query: 232 EGTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGV 291
+G+FG VY+G D +EV+ + D A +Q+ + + +T
Sbjct: 29 KGSFGEVYKGI----DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 292 SIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQYXXXX 351
S T ++I +Y L K P L + + +I+ G+ Y
Sbjct: 85 SYLKSTKLWII---MEYLGGGSALDLLKPGP------LEETYIATILREILKGLDYLHSE 135
Query: 352 XXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTF 411
N ++ ++ +++ D +A L +D + W+A E + +
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSAY 193
Query: 412 STASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPDELFS------ 465
+D+W+ G+ EL + P +++ P + + P N P L
Sbjct: 194 DFKADIWSLGITAIELAK-GEPPNSDLHPMRVLFLI--------PKNSPPTLEGQHSKPF 244
Query: 466 --VMAYCWAMNPEGRPTFPQLHSCLQEFHAQLTRY 498
+ C +P RPT +L H +TRY
Sbjct: 245 KEFVEACLNKDPRFRPTAKELLK-----HKFITRY 274
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 232 EGTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
+GTFG+V G Y + +EV++ + A V S +LQ +
Sbjct: 15 KGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQN-------TRHPF 66
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
LT L + + H + Y + L L + ++ E A + I+ +
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--------IVSAL 118
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D I+ITD L ++ SD + P ++LA E
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTP-EYLAPEV 176
Query: 406 LVHKTFSTASDVWAFGVLLWEL 427
L + A D W GV+++E+
Sbjct: 177 LEDNDYGRAVDWWGLGVVMYEM 198
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 78/202 (38%), Gaps = 24/202 (11%)
Query: 232 EGTFGRVY------RGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
+GTFG+V G Y + +EV++ + A V S +LQ +
Sbjct: 20 KGTFGKVILVREKATGRYYAMKILRKEVIIAK-DEVAHTVTESRVLQN-------TRHPF 71
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
LT L + + H + Y + L L + ++ E A + I+ +
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAE--------IVSAL 123
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D I+ITD L ++ SD + P ++LA E
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGI-SDGATMKXFCGTP-EYLAPEV 181
Query: 406 LVHKTFSTASDVWAFGVLLWEL 427
L + A D W GV+++E+
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEM 203
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 232 EGTFGRVYRGTYTEEDG------VEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
EG+FG+V +T + ++VL K+ ++S L L H +I
Sbjct: 14 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL-------LRHPHI 66
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
+ + V I+ ++ Y +Q+ K+ + QE QII V
Sbjct: 67 IKLYDV-IKSKDEIIMVIEYAGNELFDYIVQRDKM---------SEQEARRFFQQIISAV 116
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D+ L ++I D L+ + +D + L + P + A E
Sbjct: 117 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSP-NYAAPEV 173
Query: 406 LVHKTFSTAS-DVWAFGVLLW 425
+ K ++ DVW+ GV+L+
Sbjct: 174 ISGKLYAGPEVDVWSCGVILY 194
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 232 EGTFGRVYRGTYTEEDG------VEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
EG+FG+V +T + ++VL K+ ++S L L H +I
Sbjct: 24 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL-------LRHPHI 76
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
+ + V I+ ++ Y +Q+ K+ + QE QII V
Sbjct: 77 IKLYDV-IKSKDEIIMVIEYAGNELFDYIVQRDKM---------SEQEARRFFQQIISAV 126
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D+ L ++I D L+ + +D + L + P + A E
Sbjct: 127 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSP-NYAAPEV 183
Query: 406 LVHKTFSTAS-DVWAFGVLLW 425
+ K ++ DVW+ GV+L+
Sbjct: 184 ISGKLYAGPEVDVWSCGVILY 204
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 232 EGTFGRVYRGTYTEEDG------VEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
EG+FG+V +T + ++VL K+ ++S L L H +I
Sbjct: 18 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL-------LRHPHI 70
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
+ + V I+ ++ Y +Q+ K+ + QE QII V
Sbjct: 71 IKLYDV-IKSKDEIIMVIEYAGNELFDYIVQRDKM---------SEQEARRFFQQIISAV 120
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D+ L ++I D L+ + +D + L + P + A E
Sbjct: 121 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSP-NYAAPEV 177
Query: 406 LVHKTFSTAS-DVWAFGVLLW 425
+ K ++ DVW+ GV+L+
Sbjct: 178 ISGKLYAGPEVDVWSCGVILY 198
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 81/201 (40%), Gaps = 27/201 (13%)
Query: 232 EGTFGRVYRGTYTEEDG------VEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNI 285
EG+FG+V +T + ++VL K+ ++S L L H +I
Sbjct: 23 EGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL-------LRHPHI 75
Query: 286 LTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGV 345
+ + V I+ ++ Y +Q+ K+ + QE QII V
Sbjct: 76 IKLYDV-IKSKDEIIMVIEYAGNELFDYIVQRDKM---------SEQEARRFFQQIISAV 125
Query: 346 QYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIES 405
+Y N ++D+ L ++I D L+ + +D + L + P + A E
Sbjct: 126 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM--TDGNFLKTSCGSP-NYAAPEV 182
Query: 406 LVHKTFSTAS-DVWAFGVLLW 425
+ K ++ DVW+ GV+L+
Sbjct: 183 ISGKLYAGPEVDVWSCGVILY 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 23/233 (9%)
Query: 259 TDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKC 318
T SA L +E L H NI+ L SI++ + +L++ +
Sbjct: 64 TKKLSARDFQKLEREARICRKLQHPNIVR-LHDSIQEESFHYLVFD---------LVTGG 113
Query: 319 KLCPEGVAHTLTTQEVVDMCLQ-IIMGVQYXXXXXXXXXXXATRNCVVDDKLR---IQIT 374
+L + VA ++ C+Q I+ + Y N ++ K + +++
Sbjct: 114 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 173
Query: 375 DNALARDLFPSD-YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQ 433
D LA ++ S+ +H +L+ E L +S D+WA GV+L+ + +
Sbjct: 174 DFGLAIEVNDSEAWHGFAGTPG----YLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYP 228
Query: 434 PYAEIDPFEMAASLQDG-YRLNQPV--NCPDELFSVMAYCWAMNPEGRPTFPQ 483
P+ + D + A ++ G Y P E S++ +NP+ R T Q
Sbjct: 229 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ 281
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 23/233 (9%)
Query: 259 TDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKC 318
T SA L +E L H NI+ L SI++ + +L++ +
Sbjct: 41 TKKLSARDFQKLEREARICRKLQHPNIVR-LHDSIQEESFHYLVFD---------LVTGG 90
Query: 319 KLCPEGVAHTLTTQEVVDMCLQ-IIMGVQYXXXXXXXXXXXATRNCVVDDKLR---IQIT 374
+L + VA ++ C+Q I+ + Y N ++ K + +++
Sbjct: 91 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150
Query: 375 DNALARDLFPSD-YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQ 433
D LA ++ S+ +H +L+ E L +S D+WA GV+L+ + +
Sbjct: 151 DFGLAIEVNDSEAWHGFAGTPG----YLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYP 205
Query: 434 PYAEIDPFEMAASLQDG-YRLNQPV--NCPDELFSVMAYCWAMNPEGRPTFPQ 483
P+ + D + A ++ G Y P E S++ +NP+ R T Q
Sbjct: 206 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ 258
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 93/233 (39%), Gaps = 23/233 (9%)
Query: 259 TDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKC 318
T SA L +E L H NI+ L SI++ + +L++ +
Sbjct: 40 TKKLSARDFQKLEREARICRKLQHPNIVR-LHDSIQEESFHYLVFD---------LVTGG 89
Query: 319 KLCPEGVAHTLTTQEVVDMCLQ-IIMGVQYXXXXXXXXXXXATRNCVVDDKLR---IQIT 374
+L + VA ++ C+Q I+ + Y N ++ K + +++
Sbjct: 90 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 149
Query: 375 DNALARDLFPSD-YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQ 433
D LA ++ S+ +H +L+ E L +S D+WA GV+L+ + +
Sbjct: 150 DFGLAIEVNDSEAWHGFAGTPG----YLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYP 204
Query: 434 PYAEIDPFEMAASLQDG-YRLNQPV--NCPDELFSVMAYCWAMNPEGRPTFPQ 483
P+ + D + A ++ G Y P E S++ +NP+ R T Q
Sbjct: 205 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ 257
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/197 (20%), Positives = 80/197 (40%), Gaps = 20/197 (10%)
Query: 259 TDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKC 318
T SA L +E L H NI+ L SI++ + +L++ +
Sbjct: 41 TKKLSARDFQKLEREARICRKLQHPNIVR-LHDSIQEESFHYLVF---------DLVTGG 90
Query: 319 KLCPEGVAHTLTTQEVVDMCLQ-IIMGVQYXXXXXXXXXXXATRNCVVDDKLR---IQIT 374
+L + VA ++ C+Q I+ + Y N ++ K + +++
Sbjct: 91 ELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA 150
Query: 375 DNALARDLFPSD-YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQ 433
D LA ++ S+ +H +L+ E L +S D+WA GV+L+ + +
Sbjct: 151 DFGLAIEVNDSEAWHGFAGTPG----YLSPEVLKKDPYSKPVDIWACGVILY-ILLVGYP 205
Query: 434 PYAEIDPFEMAASLQDG 450
P+ + D + A ++ G
Sbjct: 206 PFWDEDQHRLYAQIKAG 222
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF 441
W+A E + K + D+W+ G++ E+ + PY +P
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPL 223
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF 441
W+A E + K + D+W+ G++ E+ + PY +P
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPL 222
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF 441
W+A E + K + D+W+ G++ E+ + PY +P
Sbjct: 183 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPL 223
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF 441
W+A E + K + D+W+ G++ E+ + PY +P
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPL 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 400 WLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPF 441
W+A E + K + D+W+ G++ E+ + PY +P
Sbjct: 182 WMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPL 222
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 141 IVDGMLKL--IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 198
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 199 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 255
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 256 CCLKRDPKQRISIPEL 271
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 400 WLAIESLVHKT-----FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY--R 452
W+A E ++ +T + +DVW+ G+ L E+ + + P+ E++P + +
Sbjct: 175 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKSEPPT 233
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L QP + C N + R T QL
Sbjct: 234 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 265
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 140 IVDGMLKL--IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 197
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 198 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 254
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 255 CCLKRDPKQRISIPEL 270
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 400 WLAIESLVHKT-----FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY--R 452
W+A E ++ +T + +DVW+ G+ L E+ + + P+ E++P + +
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKSEPPT 259
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L QP + C N + R T QL
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 400 WLAIESLVHKT-----FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY--R 452
W+A E ++ +T + +DVW+ G+ L E+ + + P+ E++P + +
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKSEPPT 259
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L QP + C N + R T QL
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 144 IVDGMLKL--IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 201
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 202 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 258
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 259 CCLKRDPKQRISIPEL 274
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 160 IVDGMLKL--IDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 218 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 274
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 275 CCLKRDPKQRISIPEL 290
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 8/92 (8%)
Query: 400 WLAIESLVHKT-----FSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGY--R 452
W+A E ++ +T + +DVW+ G+ L E+ + + P+ E++P + +
Sbjct: 201 WMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEI-EPPHHELNPMRVLLKIAKSEPPT 259
Query: 453 LNQPVNCPDELFSVMAYCWAMNPEGRPTFPQL 484
L QP + C N + R T QL
Sbjct: 260 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQL 291
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/211 (17%), Positives = 84/211 (39%), Gaps = 26/211 (12%)
Query: 233 GTFGRVYRGTYTEEDGVEEEVLVKTVTDNASAVQVSLLLQEGMAMYGLSHKNILTVLGVS 292
GT+G+VY+G + + + ++ D ++ + + + + H+NI T G
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS----HHRNIATYYGAF 90
Query: 293 IEDHTSP-----FLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQIIMGVQY 347
I+ + +L+ + ++ ++ K +TL + + +C +I+ G+ +
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTK------GNTLKEEWIAYICREILRGLSH 144
Query: 348 XXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNE--NRPVKWLAIES 405
+N ++ + +++ D ++ L D N P W+A E
Sbjct: 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPY-WMAPEV 200
Query: 406 LV-----HKTFSTASDVWAFGVLLWELTTLA 431
+ T+ SD+W+ G+ E+ A
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGA 231
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 188 IVDGMLKL--IDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 246 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 302
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 303 CCLKRDPKQRISIPEL 318
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 383 FPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTT 429
F SDYH N + + A E +++ + +SD+W+FG +L EL T
Sbjct: 211 FKSDYHGSIINTRQ---YRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 160 IVDGMLKL--IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 218 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 274
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 275 CCLKRDPKQRISIPEL 290
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 188 IVDGMLKL--IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 246 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 302
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 303 CCLKRDPKQRISIPEL 318
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 20/136 (14%)
Query: 364 VVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTAS-------- 415
+VD L++ D +A + P + D++ V ++ E++ + S +
Sbjct: 188 IVDGMLKL--IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 416 ---DVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDGYRLNQPVNCPD----ELFSVMA 468
DVW+ G +L+ + T + P+ +I + L N + PD +L V+
Sbjct: 246 PKSDVWSLGCILYYM-TYGKTPFQQI--INQISKLHAIIDPNHEIEFPDIPEKDLQDVLK 302
Query: 469 YCWAMNPEGRPTFPQL 484
C +P+ R + P+L
Sbjct: 303 CCLKRDPKQRISIPEL 318
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 73/189 (38%), Gaps = 20/189 (10%)
Query: 280 LSHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCL 339
L H NI+ + V ED +L+ + Y + F Q H + ++
Sbjct: 103 LDHPNIIKLFDV-FEDKKYFYLVTEF--YEGGELFEQIIN------RHKFDECDAANIMK 153
Query: 340 QIIMGVQYXXXXXXXXXXXATRNCVVDDK---LRIQITDNALARDLFPSDYHCLGDNENR 396
QI+ G+ Y N ++++K L I+I D L+ F DY +
Sbjct: 154 QILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS-FFSKDYKL---RDRL 209
Query: 397 PVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAASLQDG---YRL 453
+ ++ K ++ DVW+ GV+++ + P+ + ++ ++ G +
Sbjct: 210 GTAYYIAPEVLKKKYNEKCDVWSCGVIMY-ILLCGYPPFGGQNDQDIIKKVEKGKYYFDF 268
Query: 454 NQPVNCPDE 462
N N DE
Sbjct: 269 NDWKNISDE 277
>pdb|2YGP|A Chain A, Wif Domain-Egf-Like Domain 1 Met77trp Of Human Wnt
Inhibitory Factor 1 In Complex With
1,2-Dipalmitoylphosphatidylcholine
Length = 188
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/84 (19%), Positives = 35/84 (41%), Gaps = 3/84 (3%)
Query: 24 ISVESTNKDALINPHLNISSIGSIPTSIQTFSINLPCTGTMNAEVIVLISINVTLSRNSN 83
+S+ S + + +P +N+ +G++P + PC G + + ++V + NS
Sbjct: 73 LSLRSLDXGIMADPTVNVPLLGTVPHXASVVQVGFPCLGXQDG--VAAFEVDVIV-MNSE 129
Query: 84 NVTSLNFKRKKICLRVAADLDEPS 107
T L + I + + P
Sbjct: 130 GNTILXTPQNAIFFKTCQQAECPG 153
>pdb|2YGO|A Chain A, Wif Domain-Egf-Like Domain 1 Of Human Wnt Inhibitory
Factor 1 In Complex With
1,2-Dipalmitoylphosphatidylcholine
Length = 188
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 6/79 (7%)
Query: 24 ISVESTNKDALINPHLNISSIGSIPTSIQTFSINLPCTGTMNA------EVIVLISINVT 77
+S+ S + + +P +N+ +G++P + PC G + +VIV+ S T
Sbjct: 73 LSLRSLDXGIMADPTVNVPLLGTVPHXASVVQVGFPCLGXQDGVAAFEVDVIVMNSEGNT 132
Query: 78 LSRNSNNVTSLNFKRKKIC 96
+ N ++ C
Sbjct: 133 ILXTPQNAIFFKTCQQAEC 151
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCV---VDDKLRIQITDNALARDLFPSD 386
T ++ + Q++ V+Y N + +D+ +I I+D L++ P
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG- 172
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAAS 446
L P ++A E L K +S A D W+ GV+ + L Y E D
Sbjct: 173 -SVLSTACGTP-GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230
Query: 447 LQDGYRLNQPV--NCPDELFSVMAYCWAMNPEGRPTFPQ 483
L+ Y + P + D + + +PE R T Q
Sbjct: 231 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Query: 367 DKLRIQITDNALARDLFPSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWE 426
DK+R++I D A + H D + R ++ +IE L+ +ST +D+W+ + +E
Sbjct: 223 DKIRVKIADLGNACWVHK---HFTEDIQTR--QYRSIEVLIGAGYSTPADIWSTACMAFE 277
Query: 427 LTT 429
L T
Sbjct: 278 LAT 280
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCV---VDDKLRIQITDNALARDLFPSD 386
T ++ + Q++ V+Y N + +D+ +I I+D L++ P
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAAS 446
L P ++A E L K +S A D W+ GV+ + L Y E D
Sbjct: 174 --VLSTACGTP-GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230
Query: 447 LQDGYRLNQPV--NCPDELFSVMAYCWAMNPEGRPTFPQ 483
L+ Y + P + D + + +PE R T Q
Sbjct: 231 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 65/156 (41%), Gaps = 15/156 (9%)
Query: 277 MYGLSHKNILTVLGVSIEDHTSPFLIYPYQDYTNL-KRFLQKCKLCPEGVAHTLTTQEVV 335
M L H N++ + + E L+ Y D L R + + ++ LT + +
Sbjct: 140 MNQLDHANLIQLYD-AFESKNDIVLVMEYVDGGELFDRIIDE--------SYNLTELDTI 190
Query: 336 DMCLQIIMGVQYXXXXXXXXXXXATRN--CVVDDKLRIQITDNALARDLFPSDYHCLGDN 393
QI G+++ N CV D +I+I D LAR P + L N
Sbjct: 191 LFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LKVN 248
Query: 394 ENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTT 429
P ++LA E + + S +D+W+ GV+ + L +
Sbjct: 249 FGTP-EFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 281 SHKNILTVLGVSIEDHTSPFLIYPYQDYTNLKRFLQKCKLCPEGVAHTLTTQEVVDMCLQ 340
H +I+T++ S E + FL++ +L R + E VA L+ +E +
Sbjct: 158 GHPHIITLID-SYESSSFMFLVF------DLMRKGELFDYLTEKVA--LSEKETRSIMRS 208
Query: 341 IIMGVQYXXXXXXXXXXXATRNCVVDDKLRIQITDNALARDLFPSDYHCLGDNENRPVKW 400
++ V + N ++DD ++I+++D + L P + L + P +
Sbjct: 209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELCGTP-GY 265
Query: 401 LAIESL------VHKTFSTASDVWAFGVLLWELTTLAQQP 434
LA E L H + D+WA GV+L+ T LA P
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILF--TLLAGSP 303
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCV---VDDKLRIQITDNALARDLFPSD 386
T ++ + Q++ V+Y N + +D+ +I I+D L++ P
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAAS 446
L P ++A E L K +S A D W+ GV+ + L Y E D
Sbjct: 174 --VLSTACGTP-GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230
Query: 447 LQDGYRLNQPV--NCPDELFSVMAYCWAMNPEGRPTFPQ 483
L+ Y + P + D + + +PE R T Q
Sbjct: 231 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 8/159 (5%)
Query: 330 TTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCV---VDDKLRIQITDNALARDLFPSD 386
T ++ + Q++ V+Y N + +D+ +I I+D L++ P
Sbjct: 114 TERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS 173
Query: 387 YHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWELTTLAQQPYAEIDPFEMAAS 446
L P ++A E L K +S A D W+ GV+ + L Y E D
Sbjct: 174 --VLSTACGTP-GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQI 230
Query: 447 LQDGYRLNQPV--NCPDELFSVMAYCWAMNPEGRPTFPQ 483
L+ Y + P + D + + +PE R T Q
Sbjct: 231 LKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQ 269
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 28.5 bits (62), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 326 AHTLTTQEVVDMCLQIIMGVQYXXXXXXXXXXXATRNCVVDDKLR--IQITDNALARDLF 383
A L +E+V Q+ +Q+ N + + I+I + AR L
Sbjct: 96 AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155
Query: 384 PSDYHCLGDNENRPVKWLAIESLVHKTFSTASDVWAFGVLLWEL 427
P D L ++ A E H STA+D+W+ G L++ L
Sbjct: 156 PGDNFRLLFT---APEYYAPEVHQHDVVSTATDMWSLGTLVYVL 196
>pdb|2YGN|A Chain A, Wif Domain Of Human Wnt Inhibitory Factor 1 In Complex
With 1,2-Dipalmitoylphosphatidylcholine
Length = 156
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 11/61 (18%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 24 ISVESTNKDALINPHLNISSIGSIPTSIQTFSINLPCTGTMNAEVIVLISINVTLSRNSN 83
+S+ S + + +P +N+ +G++P + PC G + + ++V + +
Sbjct: 73 LSLRSLDXGIMADPTVNVPLLGTVPHXASVVQVGFPCLGXQDG--VAAFEVDVIVMNSEG 130
Query: 84 N 84
N
Sbjct: 131 N 131
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,613,313
Number of Sequences: 62578
Number of extensions: 515259
Number of successful extensions: 2010
Number of sequences better than 100.0: 701
Number of HSP's better than 100.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 1136
Number of HSP's gapped (non-prelim): 730
length of query: 499
length of database: 14,973,337
effective HSP length: 103
effective length of query: 396
effective length of database: 8,527,803
effective search space: 3377009988
effective search space used: 3377009988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)