BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy17891
         (163 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P83941|ELOC_RAT Transcription elongation factor B polypeptide 1 OS=Rattus
           norvegicus GN=Tceb1 PE=1 SV=1
          Length = 112

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/109 (92%), Positives = 105/109 (96%)

Query: 55  EDKQHGGCEGPNAMYVKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFR 114
           E+K +GGCEGP+AMYVKLISSDGHEFIVKREHAL SGTIKAMLSGPGQFAENETNE+NFR
Sbjct: 4   EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63

Query: 115 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPAIALELLMAANFLDC 163
           EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAP IALELLMAANFLDC
Sbjct: 64  EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112


>sp|P83940|ELOC_MOUSE Transcription elongation factor B polypeptide 1 OS=Mus musculus
           GN=Tceb1 PE=1 SV=1
          Length = 112

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/109 (92%), Positives = 105/109 (96%)

Query: 55  EDKQHGGCEGPNAMYVKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFR 114
           E+K +GGCEGP+AMYVKLISSDGHEFIVKREHAL SGTIKAMLSGPGQFAENETNE+NFR
Sbjct: 4   EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63

Query: 115 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPAIALELLMAANFLDC 163
           EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAP IALELLMAANFLDC
Sbjct: 64  EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112


>sp|Q15369|ELOC_HUMAN Transcription elongation factor B polypeptide 1 OS=Homo sapiens
           GN=TCEB1 PE=1 SV=1
          Length = 112

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/109 (92%), Positives = 105/109 (96%)

Query: 55  EDKQHGGCEGPNAMYVKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFR 114
           E+K +GGCEGP+AMYVKLISSDGHEFIVKREHAL SGTIKAMLSGPGQFAENETNE+NFR
Sbjct: 4   EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63

Query: 115 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPAIALELLMAANFLDC 163
           EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAP IALELLMAANFLDC
Sbjct: 64  EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112


>sp|Q2KII4|ELOC_BOVIN Transcription elongation factor B polypeptide 1 OS=Bos taurus
           GN=TCEB1 PE=3 SV=1
          Length = 112

 Score =  214 bits (544), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 101/109 (92%), Positives = 105/109 (96%)

Query: 55  EDKQHGGCEGPNAMYVKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFR 114
           E+K +GGCEGP+AMYVKLISSDGHEFIVKREHAL SGTIKAMLSGPGQFAENETNE+NFR
Sbjct: 4   EEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFR 63

Query: 115 EIPSHVLQKVCMYFTYKVRYTNSSTEIPEFPIAPAIALELLMAANFLDC 163
           EIPSHVL KVCMYFTYKVRYTNSSTEIPEFPIAP IALELLMAANFLDC
Sbjct: 64  EIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC 112


>sp|Q54Q05|ELOC_DICDI Transcription elongation factor B polypeptide 1 OS=Dictyostelium
           discoideum GN=tceb1 PE=3 SV=1
          Length = 109

 Score =  108 bits (270), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/99 (51%), Positives = 74/99 (74%), Gaps = 1/99 (1%)

Query: 66  NAMYVKLISSDGHEFIVKREHALMSGTIKAMLSGP-GQFAENETNEINFREIPSHVLQKV 124
           N+  ++L SS GHEF++ R+ + +SGTIK+MLSG    F E++ NEI FREI + VL+KV
Sbjct: 11  NSDVLRLYSSTGHEFVLSRKMSYVSGTIKSMLSGDNSNFMEDQNNEIRFREISTPVLEKV 70

Query: 125 CMYFTYKVRYTNSSTEIPEFPIAPAIALELLMAANFLDC 163
             YF +K +YTNS+T++PEFPI   + ++LL+AA+FLD 
Sbjct: 71  IQYFYFKNKYTNSTTDLPEFPINEKVVVDLLLAAHFLDT 109


>sp|Q9USX9|ELOC_SCHPO Elongin-C OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=elc1 PE=3 SV=1
          Length = 97

 Score = 82.4 bits (202), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/94 (46%), Positives = 64/94 (68%), Gaps = 2/94 (2%)

Query: 69  YVKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYF 128
           YV+LIS DG  FI+++E A +SGTI+A+L+  G F+E + NE  F +I + +L+KVC Y 
Sbjct: 5   YVRLISGDGFVFILEKEIACLSGTIRAILN-EGIFSEAQKNECTFPDIRATLLEKVCEYL 63

Query: 129 TYKVRYTNSSTEIPEFPIAPAIALELLMAANFLD 162
            Y  RY N   +IP+F I P + LELL+ A +L+
Sbjct: 64  HYNYRYKN-QLDIPKFDIPPEMVLELLVTAEYLE 96


>sp|Q03071|ELOC_YEAST Elongin-C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
           GN=ELC1 PE=1 SV=1
          Length = 99

 Score = 71.2 bits (173), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 60/96 (62%), Gaps = 6/96 (6%)

Query: 69  YVKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYF 128
           +V L+S D  E+ + R  A++S T+KAM+ GP  F E++   I  ++  SH+L+K   Y 
Sbjct: 5   FVTLVSKDDKEYEISRSAAMISPTLKAMIEGP--FRESK-GRIELKQFDSHILEKAVEYL 61

Query: 129 TYKVRYTNSS---TEIPEFPIAPAIALELLMAANFL 161
            Y ++Y+  S    EIPEF I   ++LELL+AA++L
Sbjct: 62  NYNLKYSGVSEDDDEIPEFEIPTEMSLELLLAADYL 97


>sp|Q751F9|ELOC_ASHGO Elongin-C OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC
           9923 / NRRL Y-1056) GN=ELC1 PE=3 SV=1
          Length = 100

 Score = 67.4 bits (163), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 4/95 (4%)

Query: 69  YVKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYF 128
           +V L+SSDG  F V RE A++S T+  ML     FAE +  ++    I S +L KV  Y 
Sbjct: 6   HVTLVSSDGKSFEVPRERAMLSPTLAKMLD--SSFAEAKEAKVTLPTIESSMLAKVVEYL 63

Query: 129 TY--KVRYTNSSTEIPEFPIAPAIALELLMAANFL 161
            Y  + ++ +   +IP+F + P I+LELL+AA++L
Sbjct: 64  EYLEEYKHKDDGEDIPQFEVPPEISLELLLAADYL 98


>sp|Q6PEC4|SKP1_RAT S-phase kinase-associated protein 1 OS=Rattus norvegicus GN=Skp1
           PE=2 SV=3
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|Q9WTX5|SKP1_MOUSE S-phase kinase-associated protein 1 OS=Mus musculus GN=Skp1 PE=1
           SV=3
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|Q71U00|SKP1_XENLA S-phase kinase-associated protein 1 OS=Xenopus laevis GN=skp1 PE=1
           SV=3
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|Q5R512|SKP1_PONAB S-phase kinase-associated protein 1 OS=Pongo abelii GN=SKP1 PE=2
           SV=1
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|Q4R5B9|SKP1_MACFA S-phase kinase-associated protein 1 OS=Macaca fascicularis GN=SKP1
           PE=2 SV=1
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|P63208|SKP1_HUMAN S-phase kinase-associated protein 1 OS=Homo sapiens GN=SKP1 PE=1
           SV=2
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|Q5ZKF5|SKP1_CHICK S-phase kinase-associated protein 1 OS=Gallus gallus GN=SKP1 PE=2
           SV=1
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|P63209|SKP1_CAVPO S-phase kinase-associated protein 1 OS=Cavia porcellus GN=SKP1 PE=2
           SV=2
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|Q3ZCF3|SKP1_BOVIN S-phase kinase-associated protein 1 OS=Bos taurus GN=SKP1 PE=2 SV=1
          Length = 163

 Score = 41.2 bits (95), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 15/108 (13%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KL SSDG  F V  E A  S TIK ML   G   E + + +    + + +L+KV  + T
Sbjct: 4   IKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCT 63

Query: 130 Y-------KVRYTNSSTEIPEFPIAP--------AIALELLMAANFLD 162
           +            N      + P+              EL++AAN+LD
Sbjct: 64  HHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILAANYLD 111


>sp|Q9Y709|SKP1_SCHPO Suppressor of kinetochore protein 1 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=skp1 PE=1 SV=1
          Length = 161

 Score = 36.6 bits (83), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 23/111 (20%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           +KLISSD  EF+V +  A  S  IK ML   G+        I    + S+VL+KV  +  
Sbjct: 4   IKLISSDNEEFVVDQLIAERSMLIKNMLEDVGEI----NVPIPLPNVSSNVLRKVLEWCE 59

Query: 130 Y-------------KVRYTNSSTEIPEF-----PIAPAIALELLMAANFLD 162
           +              +R    ST+I E+      +   +  E+++A+N+LD
Sbjct: 60  HHKNDLYSGTEEESDIRLK-KSTDIDEWDRKFMAVDQEMLFEIVLASNYLD 109


>sp|P52285|SKP1A_DICDI SCF ubiquitin ligase complex protein SKP1a OS=Dictyostelium
           discoideum GN=fpaA PE=1 SV=1
          Length = 162

 Score = 36.2 bits (82), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 19/108 (17%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           VKL SSD   F +++E A MS TIK M+   G+      + I    + S +L+KV  Y  
Sbjct: 4   VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGE----SDSPIPLPNVTSTILEKVLDYCR 59

Query: 130 YKVRYTNSS----------TEIPEF-----PIAPAIALELLMAANFLD 162
           +  ++ +             +IP +      +      EL++AAN+LD
Sbjct: 60  HHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLD 107


>sp|Q557E4|SKP1B_DICDI SCF ubiquitin ligase complex protein SKP1b OS=Dictyostelium
           discoideum GN=fpaB-1 PE=1 SV=1
          Length = 162

 Score = 35.4 bits (80), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 19/108 (17%)

Query: 70  VKLISSDGHEFIVKREHALMSGTIKAMLSGPGQFAENETNEINFREIPSHVLQKVCMYFT 129
           VKL SSD   F +++E A MS TIK M+   G+        I    + S +L+KV  Y  
Sbjct: 4   VKLESSDEKVFEIEKEIACMSVTIKNMIEDIGE----SDAPIPLPNVTSTILEKVLDYCR 59

Query: 130 YKVRYTNSS----------TEIPEF-----PIAPAIALELLMAANFLD 162
           +  ++ +             +IP +      +      EL++AAN+LD
Sbjct: 60  HHHQHPSPQGDDKKDEKRLDDIPPYDRDFCKVDQPTLFELILAANYLD 107


>sp|Q54TK4|Y1809_DICDI Rap-GAP domain-containing protein DDB_G0281809 OS=Dictyostelium
           discoideum GN=DDB_G0281809 PE=4 SV=1
          Length = 1619

 Score = 30.0 bits (66), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 112 NFREIPSHVLQKVCMYFTYKVRYTNSSTEIPEF 144
           NF E  S V++K+C + T+K + TN S E  + 
Sbjct: 808 NFLENASTVVRKLCKFITFKCKETNMSPETEDL 840


>sp|Q9ER75|IRX6_MOUSE Iroquois-class homeodomain protein IRX-6 OS=Mus musculus GN=Irx6
           PE=2 SV=2
          Length = 438

 Score = 29.6 bits (65), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 14/89 (15%)

Query: 9   GDKPTIYCEGLNSSEIEEEEDRIGESQPFLEQTGRYFYLGTYIGKDEDKQHGGCEGPNAM 68
           G +P   C  LN     E +D  G   P L Q G Y+   T +G+ +  ++GG E     
Sbjct: 88  GPEPPTLCGALNPQY--EFKDAAGSFAPSLTQPGAYYPYETTLGQYQYDRYGGVE----- 140

Query: 69  YVKLISSDGHEFIVKREHALMSGTIKAML 97
               +SS G      RE    +  +KA L
Sbjct: 141 ----LSSAGRRKNATRES---TSALKAWL 162


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.137    0.405 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,990,391
Number of Sequences: 539616
Number of extensions: 2572097
Number of successful extensions: 5128
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 5104
Number of HSP's gapped (non-prelim): 27
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)