BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17893
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q14019|COTL1_HUMAN Coactosin-like protein OS=Homo sapiens GN=COTL1 PE=1 SV=3
Length = 142
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 58/104 (55%)
Query: 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
T +D ++ ++AY VR D S W FKY S I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 61
Query: 92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
+R TGD MS+R KF LITW+G V +QRAK DK LVK V+
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 105
>sp|Q2HJ57|COTL1_BOVIN Coactosin-like protein OS=Bos taurus GN=COTL1 PE=2 SV=3
Length = 142
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%)
Query: 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
T +D ++ ++AY VR D+S W FKY S I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRTAYNLVRDDSSAVIWVTFKYDGSTIVPGEQGAEYQDFIQQCTDDVRLFAF 61
Query: 92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
+R TGD MS+R KF LITW+G V +QRAK DK LVK V+
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 105
>sp|B0BNA5|COTL1_RAT Coactosin-like protein OS=Rattus norvegicus GN=Cotl1 PE=1 SV=1
Length = 142
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 59/104 (56%)
Query: 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
T +D ++ ++AY VR D S W FKY + I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRAAYNLVRDDGSSVIWVTFKYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 61
Query: 92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
+R TGD MS+R KF LITW+G +V +QRAK DK LVK V+
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105
>sp|Q9CQI6|COTL1_MOUSE Coactosin-like protein OS=Mus musculus GN=Cotl1 PE=1 SV=3
Length = 142
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 59/104 (56%)
Query: 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGY 91
T +D ++ ++AY VR D S W F+Y + I +G + F Q D R F +
Sbjct: 2 ATKIDKEACRAAYNLVRDDGSAVIWVTFRYDGATIVPGDQGADYQHFIQQCTDDVRLFAF 61
Query: 92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
+R TGD MS+R KF LITW+G +V +QRAK DK LVK V+
Sbjct: 62 VRFTTGDAMSKRSKFALITWIGEDVSGLQRAKTGTDKTLVKEVV 105
>sp|P34121|COAA_DICDI Coactosin OS=Dictyostelium discoideum GN=coaA PE=1 SV=1
Length = 146
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 35 LDSKSIKSAYEDVRSDASQTQWAVFKYQD-SKISCTARGQS-FDKFRAQF-RPDERSFGY 91
+ S +K+AY++V +D++ T W +FKY+ +KI + +G F + + +P ER + Y
Sbjct: 4 VSSTELKAAYDEVLADSNDTNWCLFKYEGKNKIVLSGKGSGGFAELAQEINQPSERLYAY 63
Query: 92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
LR+++GD+ S+R KF+ I+W G EVG + +A VS+ KA VK VI
Sbjct: 64 LRVVSGDDESKRSKFVFISWCGEEVGPLAKANVSVHKASVKQVI 107
>sp|Q9P7E8|APP1_SCHPO Protein app1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=app1 PE=2 SV=1
Length = 857
Score = 45.8 bits (107), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSK---ISCTARGQSFDKFRAQFRPDERSF 89
T+ I++ YE V S A WA+F Y+ + + A G D+F +F + F
Sbjct: 7 TSTHGAEIRNVYEKVLSGADDCSWAIFGYEKGQGNILKVVASGNDNDEFLDEFDENAVLF 66
Query: 90 GYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVI 135
G+LR+ D + KF+L+ W C ++ SI A V +++
Sbjct: 67 GFLRVK--DVNTGLNKFVLVCW--CGEAAARKGLFSIHMATVSNLL 108
>sp|Q16643|DREB_HUMAN Drebrin OS=Homo sapiens GN=DBN1 PE=1 SV=4
Length = 649
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 42 SAYEDVRSDASQTQWAVFKYQDS----KISCTARGQSFDKFRAQFRPDERSFGYLRMMTG 97
+AYE+V + S WA++ Y+D K++ + G + F + +G+ +
Sbjct: 15 AAYEEVIREESAADWALYTYEDGSDDLKLAASGEG-GLQELSGHFENQKVMYGFCSVK-- 71
Query: 98 DEMSRRLKFLLITWVGCEV 116
D + K++LI WVG +V
Sbjct: 72 DSQAALPKYVLINWVGEDV 90
>sp|Q07266|DREB_RAT Drebrin OS=Rattus norvegicus GN=Dbn1 PE=2 SV=3
Length = 707
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 42 SAYEDVRSDASQTQWAVFKYQDS----KISCTARGQSFDKFRAQFRPDERSFGYLRMMTG 97
+AYE+V + S WA++ Y+D K++ + G + F + +G+ +
Sbjct: 15 AAYEEVIREESAADWALYTYEDGSDDLKLAASGEG-GLQELSGHFENQKVMYGFCSVK-- 71
Query: 98 DEMSRRLKFLLITWVGCEV 116
D + K++LI WVG +V
Sbjct: 72 DSQAALPKYVLINWVGEDV 90
>sp|Q9QXS6|DREB_MOUSE Drebrin OS=Mus musculus GN=Dbn1 PE=1 SV=4
Length = 706
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 42 SAYEDVRSDASQTQWAVFKYQDS----KISCTARGQSFDKFRAQFRPDERSFGYLRMMTG 97
+AYE+V + S WA++ Y+D K++ + G + F + +G+ +
Sbjct: 15 AAYEEVIREESAADWALYTYEDGSDDLKLAASGEG-GLQELSGHFENQKVMYGFCSVK-- 71
Query: 98 DEMSRRLKFLLITWVGCEV 116
D + K++LI WVG +V
Sbjct: 72 DSQAALPKYVLINWVGEDV 90
>sp|A6H7G2|DBNL_BOVIN Drebrin-like protein OS=Bos taurus GN=DBNL PE=2 SV=1
Length = 423
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 36 DSKSIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGY 91
+ ++ AY+ V ++ S T WA+F Y+ D +++ T G ++ + + + +
Sbjct: 8 NGPALLEAYQQVVNEKSSTDWALFTYEGNSNDIRVAGTGEG-GLEEMVEELNSGKVMYAF 66
Query: 92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRA 122
R+ D S KF+LI W G V +++
Sbjct: 67 CRVK--DPNSGLPKFVLINWTGEGVNDVRKG 95
>sp|Q9VU84|DBNL_DROME Drebrin-like protein OS=Drosophila melanogaster GN=CG10083 PE=1
SV=1
Length = 531
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 40 IKSAYEDVRSDASQTQWAVFKY--QDSKISCTARGQ-SFDKFRAQFRPDERSFGYLRMMT 96
I +A++DV D S T W++F Y Q +++ A G D+ + + ++R+
Sbjct: 12 IVAAWKDVLDDKSDTNWSLFGYEGQTNELKVVATGDGGVDELNEDLNSGKIMYAFVRIE- 70
Query: 97 GDEMSRRLKFLLITWVGCEVGVIQRA 122
D + K+LLI W G V+++
Sbjct: 71 -DPKTGLNKYLLINWQGEGAPVLRKG 95
>sp|Q6GM14|DBNLB_XENLA Drebrin-like protein B OS=Xenopus laevis GN=dbnl-b PE=2 SV=1
Length = 376
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 36 DSKSIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGY 91
+ ++++AY+DV + ++T WA++ Y+ D +++ T G ++ + + + +
Sbjct: 8 NGAALQAAYKDVLDEKTKTDWALYTYEGNSNDIRLAETGDG-GLEELVEELSSGKVMYAF 66
Query: 92 LRMMTGDEMSRRLKFLLITWVG 113
R+ D S KF+LI W G
Sbjct: 67 CRVK--DPNSGLPKFVLINWTG 86
>sp|Q9UJU6|DBNL_HUMAN Drebrin-like protein OS=Homo sapiens GN=DBNL PE=1 SV=1
Length = 430
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 43/88 (48%), Gaps = 7/88 (7%)
Query: 39 SIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGYLRM 94
+++ AY V ++ S T WA+F Y+ D +++ T G ++ + + + + R+
Sbjct: 11 ALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEG-GLEEMVEELNSGKVMYAFCRV 69
Query: 95 MTGDEMSRRLKFLLITWVGCEVGVIQRA 122
D S KF+LI W G V +++
Sbjct: 70 K--DPNSGLPKFVLINWTGEGVNDVRKG 95
>sp|Q7ZXQ9|DBNLA_XENLA Drebrin-like protein A OS=Xenopus laevis GN=dbnl-a PE=2 SV=1
Length = 447
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 36 DSKSIKSAYEDVRSDASQTQWAVFKYQ----DSKISCTARGQSFDKFRAQFRPDERSFGY 91
+ +++ AY+DV + ++T WA++ Y+ D +++ T G ++ + + + +
Sbjct: 8 NGAALQGAYKDVLDEKTKTDWALYTYEGNSNDIRLAETGDG-GLEELVEELSSGKVMYAF 66
Query: 92 LRMMTGDEMSRRLKFLLITWVG 113
R+ D S KF+L+ W G
Sbjct: 67 CRVK--DPNSGLPKFVLVNWTG 86
>sp|A5UHJ5|TIG_HAEIG Trigger factor OS=Haemophilus influenzae (strain PittGG) GN=tig
PE=3 SV=1
Length = 432
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 76 DKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEV--GVIQRAKVSIDKALVKS 133
D+F A+F P+ +S LR M R LK L++ V +V G+I++ + + ++V+
Sbjct: 250 DEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVINGLIEQNPIDVPASVVEE 309
Query: 134 VI 135
I
Sbjct: 310 EI 311
>sp|B2IB12|ACSA_BEII9 Acetyl-coenzyme A synthetase OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=acsA PE=3
SV=1
Length = 645
Score = 30.8 bits (68), Expect = 3.0, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 89 FGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKV 124
+ Y+ +M G E S RL+ L+TWV ++G I V
Sbjct: 558 YAYVTLMNGIEPSDRLRTELVTWVRKDIGPIATPDV 593
>sp|A5UE12|TIG_HAEIE Trigger factor OS=Haemophilus influenzae (strain PittEE) GN=tig
PE=3 SV=1
Length = 432
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 76 DKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEV--GVIQRAKVSIDKALVKS 133
D+F A+F P+ +S LR M R LK L++ V +V G+I++ + + + V+
Sbjct: 250 DEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVINGLIEQNPIDVPASAVEE 309
Query: 134 VI 135
I
Sbjct: 310 EI 311
>sp|Q4QMK6|TIG_HAEI8 Trigger factor OS=Haemophilus influenzae (strain 86-028NP) GN=tig
PE=3 SV=1
Length = 432
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 76 DKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEV--GVIQRAKVSIDKALVKS 133
D+F A+F P+ +S LR M R LK L++ V +V G+I++ + + + V+
Sbjct: 250 DEFVAKFGPNTKSVADLRAEIRKNMERELKNALVSRVKQQVINGLIEQNPIDVPASAVEE 309
Query: 134 VI 135
I
Sbjct: 310 EI 311
>sp|Q9FF86|DCR_ARATH BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1
Length = 484
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 47/94 (50%), Gaps = 6/94 (6%)
Query: 46 DVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMS-RRL 104
D R+D + +F+++D+ ++C A G S +FR E FG+ + T S R
Sbjct: 357 DARNDEWEKSPKIFQFKDAGVNCVAVGSS-----PRFRVYEVDFGFGKPETVRSGSNNRF 411
Query: 105 KFLLITWVGCEVGVIQRAKVSIDKALVKSVITFK 138
++ + G G+ +++++ ++++ ++ K
Sbjct: 412 NGMMYLYQGKAGGISIDVEITLEASVMEKLVKSK 445
>sp|B0UW21|TIG_HAES2 Trigger factor OS=Haemophilus somnus (strain 2336) GN=tig PE=3 SV=1
Length = 432
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 76 DKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEV--GVIQRAKVSIDKALVKS 133
D+F A+F P+ ++ LR M R LK L++ + +V G++++ + + A V+
Sbjct: 250 DEFVAKFGPNTKNVADLRNEIAKNMQRELKNALVSRIKTQVIDGLLEQNPIEVPTAAVEQ 309
Query: 134 VI 135
I
Sbjct: 310 EI 311
>sp|Q0I4F2|TIG_HAES1 Trigger factor OS=Haemophilus somnus (strain 129Pt) GN=tig PE=3
SV=1
Length = 432
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 76 DKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEV--GVIQRAKVSIDKALVKS 133
D+F A+F P+ ++ LR M R LK L++ + +V G++++ + + A V+
Sbjct: 250 DEFVAKFGPNTKNVADLRNEIAKNMQRELKNALVSRIKTQVIDGLLEQNPIEVPTAAVEQ 309
Query: 134 VI 135
I
Sbjct: 310 EI 311
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,104,867
Number of Sequences: 539616
Number of extensions: 1615848
Number of successful extensions: 3940
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3932
Number of HSP's gapped (non-prelim): 24
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)