Query psy17893
Match_columns 143
No_of_seqs 117 out of 416
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 16:50:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17893.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17893hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t3y_A Coactosin-like protein; 100.0 1.6E-33 5.6E-38 209.8 10.9 108 33-140 2-109 (141)
2 1x67_A Drebrin-like protein; c 100.0 6.1E-31 2.1E-35 196.6 10.8 110 29-140 8-120 (146)
3 1hqz_1 ABP1P, actin-binding pr 99.9 9.1E-27 3.1E-31 172.2 10.5 110 29-140 1-116 (141)
4 1cfy_A Cofilin; actin-binding, 99.9 1.8E-25 6.2E-30 165.3 9.7 108 32-140 4-117 (143)
5 1f7s_A Actin depolymerizing fa 99.9 4.7E-25 1.6E-29 162.8 10.3 108 32-140 6-119 (139)
6 2kd5_A ADF H, actin severing a 99.9 1.1E-24 3.9E-29 161.9 9.7 108 29-138 1-113 (144)
7 1cnu_A Actophorin, ADF, cofili 99.9 2E-24 6.9E-29 158.5 9.3 103 37-140 6-113 (137)
8 2xfa_A Actin depolymerization 99.9 4.4E-24 1.5E-28 159.0 9.6 111 29-140 4-126 (148)
9 2kvk_A Actin severing and dyna 99.9 3.8E-24 1.3E-28 159.3 8.6 111 29-141 1-116 (144)
10 2i2q_A Cofilin; N-terminal ser 99.9 1.2E-23 4.1E-28 154.5 10.7 108 32-140 4-115 (137)
11 1m4j_A A6 gene product, twinfi 99.9 2.5E-23 8.5E-28 154.1 8.5 107 29-139 1-116 (142)
12 2d8b_A Twinfilin-1; cell-free 99.9 7E-23 2.4E-27 156.0 8.5 113 20-136 13-131 (166)
13 1v6f_A MGMF-beta, GLIA maturat 99.9 1.4E-22 4.6E-27 152.0 9.8 104 36-140 16-125 (151)
14 2w0i_A Twinfilin-2; cytoskelet 99.9 1.2E-22 4.1E-27 149.5 8.8 98 37-136 5-106 (135)
15 2lj8_A Cofilin/actin depolymer 99.9 2.6E-22 8.8E-27 149.5 10.5 112 28-141 8-123 (144)
16 1vkk_A GMF-gamma, GLIA maturat 99.9 1.5E-22 5.2E-27 152.6 9.3 105 34-139 20-130 (154)
17 1ak6_A Destrin; actin depolyme 99.9 9.9E-24 3.4E-28 161.8 1.5 117 24-140 3-142 (174)
18 2vac_A Twinfilin-2; transferas 99.9 5.6E-22 1.9E-26 145.6 8.7 100 36-139 6-113 (134)
19 1tvj_A Cofilin; ADF, actin bin 99.9 9E-22 3.1E-26 149.8 9.3 107 34-140 5-133 (166)
20 2l72_A Tgadf, actin depolymeri 99.9 7.2E-22 2.5E-26 146.9 7.9 103 29-140 20-124 (139)
21 3q2b_A Pfadf1, cofilin/actin-d 99.8 1.1E-19 3.9E-24 132.4 6.1 100 32-140 5-109 (124)
22 3daw_B Twinfilin-1, protein A6 99.7 2.4E-16 8.2E-21 119.9 8.7 99 36-136 24-126 (164)
23 2vik_A Villin 14T; actin-bindi 34.9 40 0.0014 23.6 3.7 55 79-137 36-90 (126)
24 1t44_G Chimera of gelsolin dom 32.0 42 0.0014 24.2 3.5 55 79-136 35-89 (147)
25 2lnd_A De novo designed protei 30.8 1.2E+02 0.0042 20.3 5.6 72 8-95 12-86 (112)
26 2ff3_A Gelsolin; protein-prote 27.4 60 0.0021 23.5 3.7 84 42-136 28-111 (150)
27 3cip_G Gelsolin; actin, dictyo 27.2 64 0.0022 22.6 3.7 84 42-136 9-92 (128)
No 1
>1t3y_A Coactosin-like protein; beta sheet, protein binding; 1.15A {Homo sapiens} SCOP: d.109.1.2 PDB: 1t2l_A 1t3x_A 1vfq_A 1tmw_A 1wnj_A 1udm_A 1wm4_A
Probab=100.00 E-value=1.6e-33 Score=209.78 Aligned_cols=108 Identities=43% Similarity=0.678 Sum_probs=103.7
Q ss_pred cccChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEee
Q psy17893 33 TTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWV 112 (143)
Q Consensus 33 ~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~Wi 112 (143)
+.+++++|.+||++||++++.++|++|+|++++|+|.++|+||+||+++|++++|+||++|+..+++++.|+|||||+||
T Consensus 2 ~~~~~~~~~~a~~~v~~~~~~~~wilf~~~~~~i~v~~~G~g~~e~~~~L~~~~~~Ya~~r~~~~~~~~~~~K~vfI~W~ 81 (141)
T 1t3y_A 2 TKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWI 81 (141)
T ss_dssp CEECHHHHHHHHHHHHCTTSSCCEEEEEEETTEEEEEEEESSHHHHHHHCCTTCEEEEEEEEEECSGGGCEEEEEEEEEE
T ss_pred CCCChHHHHHHHHHHHcCCCCceEEEEEEcCCEEEEEecCCCHHHHHhhCCCCceEEEEEEEEecCCCCceeeEEEEEEC
Confidence 46899999999999999988899999999999999999999999999999999999999999878888999999999999
Q ss_pred cCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 113 GCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 113 Ge~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
||++|+++||++++|+++|+++|+|||.
T Consensus 82 pd~~~~~~K~~~as~k~~vk~~l~g~~~ 109 (141)
T 1t3y_A 82 GENVSGLQRAKTGTDKTLVKEVVQNFAK 109 (141)
T ss_dssp CTTSCHHHHHHHHHHHHHHTTTSCCCSE
T ss_pred CCCCCHHHhhhHHHHHHHHHHHhcccEE
Confidence 9999999999999999999999999984
No 2
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=99.97 E-value=6.1e-31 Score=196.57 Aligned_cols=110 Identities=20% Similarity=0.414 Sum_probs=102.2
Q ss_pred eccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceee
Q psy17893 29 CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLK 105 (143)
Q Consensus 29 ~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~K 105 (143)
|++....++++|.+||++|++++..++|++|+|+++ +|+|.++|+ ||+||+++|++++|+||++|++ ++++.++|
T Consensus 8 m~~~l~~~~~e~~~a~~~v~~~~~~~~wi~~~i~~~~~~l~v~~~G~~~~~e~~~~L~~~~~~Y~~~r~~--~~~~~~~K 85 (146)
T 1x67_A 8 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSGKVMYAFCRVK--DPNSGLPK 85 (146)
T ss_dssp SCCCCCTTHHHHHHHHHHHHCSSSSCSEEEEEESSSSSCEEEEEEESSCHHHHHHHCCTTSEEEEEEEEE--CSSSCSEE
T ss_pred eEEEcCCCCHHHHHHHHHHHcCCCCccEEEEEEeCCCcEEEEEeccCCCHHHHHhhCCCCceEEEEEEEE--cCCCCeee
Confidence 444556679999999999999987899999999986 799999999 9999999999999999999998 56788999
Q ss_pred EEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 106 FLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 106 fVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
||||+||||++|+++||+|++|+++|++.|+++|.
T Consensus 86 ~vfI~W~pd~a~v~~Km~yas~k~~lk~~l~g~~~ 120 (146)
T 1x67_A 86 FVLINWTGEGVNDVRKGACASHVSTMASFLKGAHV 120 (146)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHHHHTTTEEE
T ss_pred EEEEEECCCCCChhheeeehhhHHHHHHhcCCcEE
Confidence 99999999999999999999999999999999985
No 3
>1hqz_1 ABP1P, actin-binding protein; cofilin homology domain, NEW YORK SGX researc for structural genomics, NYSGXRC, structural genomics, PSI; 2.10A {Saccharomyces cerevisiae} SCOP: d.109.1.2
Probab=99.94 E-value=9.1e-27 Score=172.17 Aligned_cols=110 Identities=18% Similarity=0.270 Sum_probs=98.0
Q ss_pred eccc-cc--cChHHHHHHHHHHHcC-CCCccEEEEEeeC-CeEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcce
Q psy17893 29 CVCP-TT--LDSKSIKSAYEDVRSD-ASQTQWAVFKYQD-SKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRR 103 (143)
Q Consensus 29 ~~m~-~~--~~~~~i~~A~~~Vr~d-~~~~nWilf~y~~-~~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r 103 (143)
|+|+ .+ .++++|.+||++++.+ .+.++|++|+|++ ++|+|.++|++++||+++|++++++||++|+. ++++.+
T Consensus 1 ~~m~~i~l~~~~~e~~~a~~~~~~~~~~~~~~ii~~i~~~~~i~v~~~g~~~~el~~~l~~~~~rY~~~~~~--~~~~~~ 78 (141)
T 1hqz_1 1 MALEPIDYTTHSREIDAEYLKIVRGSDPDTTWLIISPNAKKEYEPESTGSSFHDFLQLFDETKVQYGLARVS--PPGSDV 78 (141)
T ss_dssp --CCCCCCSTTHHHHHHHHHHHHHTCCTTCCEEEEEECTTSCEEEEEEESCHHHHHTCCCTTSCEEEEEEEC--CTTCSC
T ss_pred CcccccccCCCCHHHHHHHHHHHhCCCCCceEEEEEEcCCCEEEEEeecCCHHHHHhhCCCCceEEEEEEEe--cCCCce
Confidence 4555 33 3479999999999997 4579999999998 47999999999999999999999999999998 556889
Q ss_pred eeEEEEEeecCCcccccceeeeecHHHHHh-hccCCcc
Q psy17893 104 LKFLLITWVGCEVGVIQRAKVSIDKALVKS-VITFKFK 140 (143)
Q Consensus 104 ~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~-~~~~yh~ 140 (143)
.|+|||.|||+++++..||.|++|++.+++ .|+++|.
T Consensus 79 ~k~vfI~w~Pd~~~vk~Kmlyas~k~~l~~~~l~g~~~ 116 (141)
T 1hqz_1 79 EKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHV 116 (141)
T ss_dssp CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTSCSCSE
T ss_pred eeEEEEEECCCCCChhheEEEeccHHHHHHHhCCceEE
Confidence 999999999999999999999999999997 9999985
No 4
>1cfy_A Cofilin; actin-binding, cytoskeleton, actin-binding protein; 2.30A {Saccharomyces cerevisiae} SCOP: d.109.1.2 PDB: 1cof_A 1qpv_A
Probab=99.92 E-value=1.8e-25 Score=165.34 Aligned_cols=108 Identities=13% Similarity=0.227 Sum_probs=96.5
Q ss_pred ccccChHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeecC--CHHHHHhccCCCceEEEEEEeEe-CCCC-cceee
Q psy17893 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARGQ--SFDKFRAQFRPDERSFGYLRMMT-GDEM-SRRLK 105 (143)
Q Consensus 32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~~-~d~~-s~r~K 105 (143)
+....+++|.+||+++|.++ .++|++|+|++ ++|++.++|+ +++||+++|++++++|+++|+.. .+++ +.+.|
T Consensus 4 sGi~v~~e~~~a~~~~~~~~-~~~~ii~~i~~~~~~i~v~~~g~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~~k 82 (143)
T 1cfy_A 4 SGVAVADESLTAFNDLKLGK-KYKFILFGLNDAKTEIVVKETSTDPSYDAFLEKLPENDCLYAIYDFEYEINGNEGKRSK 82 (143)
T ss_dssp --CEECHHHHHHHHHHHHHC-CCSEEEEEECTTSSEEEEEEEECCCCHHHHHTTSCTTCCEEEEEEEEEECSSSCCEEEE
T ss_pred CCcEeCHHHHHHHHHHHCCC-CeeEEEEEEcCCCCEEEEEecCCCCCHHHHHHhCCCCCcEEEEEEeeeecCCCcccccC
Confidence 34445899999999999986 69999999987 3899999887 89999999999999999999994 4444 78999
Q ss_pred EEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 106 FLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 106 fVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
+|||.|||+++++.+||.|++|++.+++.|+++|.
T Consensus 83 ~vfI~w~Pd~a~v~~KmlyAssk~~l~~~l~g~~~ 117 (143)
T 1cfy_A 83 IVFFTWSPDTAPVRSKMVYASSKDALRRALNGVST 117 (143)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTCCE
T ss_pred EEEEEECCCCCChhheeehHhhHHHHHHhcCCceE
Confidence 99999999999999999999999999999999885
No 5
>1f7s_A Actin depolymerizing factor (ADF); KINK in alpha-helix 3, plant protein; HET: LDA; 2.00A {Arabidopsis thaliana} SCOP: d.109.1.2
Probab=99.92 E-value=4.7e-25 Score=162.76 Aligned_cols=108 Identities=15% Similarity=0.237 Sum_probs=98.6
Q ss_pred ccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeE-eCCCCcceee
Q psy17893 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLK 105 (143)
Q Consensus 32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~K 105 (143)
+....+++|.+||++++.++ .++|++|+|+++ +|++.++|+ +++||.++|++++++|+++|+. ..++++.+.|
T Consensus 6 sGi~v~~e~~~af~~~~~~~-~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~~k 84 (139)
T 1f7s_A 6 SGMAVHDDCKLRFLELKAKR-THRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLPADECRYAIYDFDFVTAENCQKSK 84 (139)
T ss_dssp CCCEECHHHHHHHHHHHHHC-CCSEEEEEEETTTTEEEEEEECCSSCCHHHHHTTSCTTSCEEEEEEEEEECTTSCEEEE
T ss_pred cCcEeCHHHHHHHHHHHcCC-CcEEEEEEECCCCcEEEEEeecCCCCCHHHHHHhCCCCCceEEEEEeeeeccccCcccC
Confidence 44456899999999999865 689999999886 899999886 7999999999999999999999 5667789999
Q ss_pred EEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 106 FLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 106 fVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
+|||.|||+++++..||.|++|++.+++.|+++|.
T Consensus 85 ~vfI~w~P~~a~v~~KmlyAssk~~l~~~l~g~~v 119 (139)
T 1f7s_A 85 IFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQV 119 (139)
T ss_dssp EEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCCE
T ss_pred EEEEEECCCCCChhHheehHHhHHHHHHhcCCeEE
Confidence 99999999999999999999999999999999985
No 6
>2kd5_A ADF H, actin severing and dynamics regulatory protein; cofilin, solution structure, hormone; NMR {Leishmania donovani} PDB: 2kvk_A
Probab=99.91 E-value=1.1e-24 Score=161.87 Aligned_cols=108 Identities=18% Similarity=0.292 Sum_probs=96.8
Q ss_pred eccccccChHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcce
Q psy17893 29 CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRR 103 (143)
Q Consensus 29 ~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r 103 (143)
|+|+...-+++|.+||+++|.++ ++|++|+|++ ++|+|.++|. +++||.++|++++++|+++|+....+++++
T Consensus 1 Ms~SGi~vs~e~~~a~~~~~~~~--~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~ 78 (144)
T 2kd5_A 1 MAISGVTLEESVRGAIDDLRMKK--SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAGSKR 78 (144)
T ss_dssp CCCCSCBCCHHHHHHHHHHTTTS--SSEEEEEECSSSCBEEEEEECCSCCCHHHHTTTTSCSSCEEEEEEEEEESSSCEE
T ss_pred CCccCCCcCHHHHHHHHHHHcCC--eeEEEEEECCCCCEEEEEeccCCCCCHHHHHHhCCccCcEEEEEEEEecCCCCCc
Confidence 45666666999999999999876 9999999986 3799998885 799999999999999999999854334789
Q ss_pred eeEEEEEeecCCcccccceeeeecHHHHHhhccCC
Q psy17893 104 LKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFK 138 (143)
Q Consensus 104 ~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~y 138 (143)
.|+|||.|||+++++..||.|++|++.+++.|+++
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyAssk~~l~~~l~g~ 113 (144)
T 2kd5_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEGY 113 (144)
T ss_dssp EEEEEEEECCCCSCSHHHHHHHHHGGGGTTTTCCS
T ss_pred cCEEEEEECCCCCCHHHHhhhHHHHHHHHHHhCCe
Confidence 99999999999999999999999999999999987
No 7
>1cnu_A Actophorin, ADF, cofilin; actin-binding protein, contractIle; 2.25A {Acanthamoeba polyphaga} SCOP: d.109.1.2 PDB: 1ahq_A
Probab=99.91 E-value=2e-24 Score=158.53 Aligned_cols=103 Identities=13% Similarity=0.243 Sum_probs=93.0
Q ss_pred hHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEe
Q psy17893 37 SKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITW 111 (143)
Q Consensus 37 ~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~W 111 (143)
+++|.+||+++|.++ .++|++|+|++ ++|++.++|+ +++||.++|++++++|+++|+....++..+.|+|||.|
T Consensus 6 ~~e~~~a~~~~~~~~-~~~~ii~~i~~~~~~i~v~~~g~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~k~vfI~w 84 (137)
T 1cnu_A 6 SDDCVQKFNELKLGH-QHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGGQRNKITFILW 84 (137)
T ss_dssp CHHHHHHHHHHHHHC-CCSEEEEEECTTSSEEEEEEECCTTCCHHHHHTTSCTTSCEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CHHHHHHHHHHHcCC-CccEEEEEEcCCCCEEEEEeccCCCCCHHHHHHhCCCCCceEEEEEeeeecCCCCccCEEEEEE
Confidence 689999999999976 69999999987 3899999994 89999999999999999999984222227899999999
Q ss_pred ecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 112 VGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 112 iGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
||+++++.+||.|++|++.+++.|+++|.
T Consensus 85 ~Pd~a~v~~Kmlyassk~~l~~~l~g~~~ 113 (137)
T 1cnu_A 85 APDSAPIKSKMMYTSTKDSIKKKLVGIQV 113 (137)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHSTTCCE
T ss_pred CCCCCChHHheehHHhHHHHHHHhcCceE
Confidence 99999999999999999999999999875
No 8
>2xfa_A Actin depolymerization factor 2; actin binding protein, protein binding; 2.10A {Plasmodium berghei}
Probab=99.90 E-value=4.4e-24 Score=159.03 Aligned_cols=111 Identities=13% Similarity=0.109 Sum_probs=97.4
Q ss_pred ecccc-ccChHHHHHHHHHHHcCCCCccEEEEEeeCC-eEEEe------eecC---CHHHHHhccCCCceEEEEEEeEe-
Q psy17893 29 CVCPT-TLDSKSIKSAYEDVRSDASQTQWAVFKYQDS-KISCT------ARGQ---SFDKFRAQFRPDERSFGYLRMMT- 96 (143)
Q Consensus 29 ~~m~~-~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~-~l~l~------~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~- 96 (143)
|+|+. ...+++|.+||+++|.++ .++|++|+|+++ +|++. .+|+ +++||++.|++++++|++||+..
T Consensus 4 msm~sGi~v~~e~~~af~~~k~~k-~~~~ii~~i~~~~~i~v~~~~~~~~~g~~~~~~~~~~~~L~~~~prY~~y~~~~~ 82 (148)
T 2xfa_A 4 GSMVSGVNVSDECIYEFNRLKVKH-LNKYIIYKIENLEKIVVDVLEHDMELTSLDNIIMRIKNNLKNTECRYIIADMPIP 82 (148)
T ss_dssp --CCCCCEECHHHHHHHHHHHTSC-CCSEEEEEEETTTEEEEEEEECCTTCCCHHHHHHHHHHTCBTTBCEEEEEEEEEC
T ss_pred ccccCCCeeCHHHHHHHHHHHCCC-ceEEEEEEECCCCEEEEEecccccccCCCCCCHHHHHHhCCcCCcEEEEEecccc
Confidence 67753 336999999999999976 699999999644 79998 7785 79999999999999999999994
Q ss_pred CCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 97 GDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 97 ~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
.++++.+.|+|||.|||+++++.+||.||++++.+++.|+++|.
T Consensus 83 ~~~g~~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~~ 126 (148)
T 2xfa_A 83 TPEGVLRDRIYFIFWSPGLSKPKEKMLYAASKESLVRKINGIFK 126 (148)
T ss_dssp CSSCCCEEEEEEEEECCTTSCHHHHHHHHHHHHHHHTTCTTCSE
T ss_pred cCCCCcccCEEEEEECCCCCChHHHhHhHHHHHHHHHHhcCCeE
Confidence 55677899999999999999999999999999999999998875
No 9
>2kvk_A Actin severing and dynamics regulatory protein; ADF/cofilin, hormone; NMR {Leishmania donovani}
Probab=99.90 E-value=3.8e-24 Score=159.33 Aligned_cols=111 Identities=17% Similarity=0.293 Sum_probs=99.5
Q ss_pred eccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcce
Q psy17893 29 CVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRR 103 (143)
Q Consensus 29 ~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r 103 (143)
|+|+...-+++|.+||+++|.++ ++|++|+++.+ +|++..+|. +++||.++|++++++||+||+...++++.+
T Consensus 1 Ma~SGv~v~de~~~af~~lk~~k--~~~vi~~I~~~~~~i~v~~~~~~~~~~~e~~~~L~~~~prY~~y~~~~~~~~~~~ 78 (144)
T 2kvk_A 1 MAISGVTLEESVRGAIDDLRMKK--SRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFDFEYNDAGSKR 78 (144)
T ss_dssp CCCCCCEECHHHHHHHHHHHTTS--SSEEEEEECTTSCEEEEEEEECTTCCHHHHHHTCCTTSCCEEEEEEEEEETTEEE
T ss_pred CCcCCcccCHHHHHHHHHHhcCC--ceEEEEEEeCCCcEEEEEeccCCCCCHHHHHHhCCccCceEEEEEeeeccCCCCc
Confidence 78887777899999999999864 69999999764 688877775 699999999999999999999976777889
Q ss_pred eeEEEEEeecCCcccccceeeeecHHHHHhhccCCccc
Q psy17893 104 LKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKF 141 (143)
Q Consensus 104 ~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~~ 141 (143)
.|+|||.|||+++|+..||.|++|++.+++.|++++.+
T Consensus 79 ~k~vfI~w~Pd~a~vk~KMlyassk~~lk~~l~~~~~i 116 (144)
T 2kvk_A 79 EKLILIQWIPDTARPREKMMYSASRDALSSVSEGYLPI 116 (144)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCTTEEEE
T ss_pred ccEEEEEECCCCCCHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 99999999999999999999999999999999986543
No 10
>2i2q_A Cofilin; N-terminal serine, actin-binding protein; HET: LDA; 1.72A {Schizosaccharomyces pombe}
Probab=99.90 E-value=1.2e-23 Score=154.54 Aligned_cols=108 Identities=16% Similarity=0.230 Sum_probs=94.1
Q ss_pred ccccChHHHHHHHHHHHcCCCCccEEEEEeeC--CeEEEeeec--CCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEE
Q psy17893 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQD--SKISCTARG--QSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFL 107 (143)
Q Consensus 32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~--~~l~l~~~G--~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfV 107 (143)
+....+++|.+||+++|.++ .++|++|+|++ ++|++.... .+++||.++|++++++|+++|+....+++.+.|+|
T Consensus 4 sGi~v~~e~~~a~~~~~~~~-~~~~ii~~i~~~~~~i~v~~~~~~~~~~el~~~L~~~~~rY~~~~~~~~~~~~~~~k~v 82 (137)
T 2i2q_A 4 SGVKVSPECLEAFQELKLGK-SLRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRYAIYDFEFNLGEGVRNKII 82 (137)
T ss_dssp SCCEECHHHHHHHHHHHHTC-CCSEEEEEECTTSSEEEEEEEECCCCHHHHHHTSCSSSCEEEEEEEEECSSSSCEEEEE
T ss_pred CCcccCHHHHHHHHHHHCCC-CceEEEEEECCCCcEEEEecCCCCCCHHHHHHhCCCcCceEEEEEeeeecCCCCccCEE
Confidence 44446899999999999976 69999999987 378887632 38999999999999999999999533333899999
Q ss_pred EEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 108 LITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
||.|||+++++.+||.|++|++.+++.|+++|+
T Consensus 83 fI~w~Pd~a~vk~KMlyassk~~l~~~l~g~~~ 115 (137)
T 2i2q_A 83 FISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGT 115 (137)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHTTCCCCCE
T ss_pred EEEECCCCCChhHhhhhHHHHHHHHHHhcCceE
Confidence 999999999999999999999999999998875
No 11
>1m4j_A A6 gene product, twinfilin; mixed beta-sheet, PAIR of alpha-helices, structural protein; 1.60A {Mus musculus} SCOP: d.109.1.2
Probab=99.89 E-value=2.5e-23 Score=154.15 Aligned_cols=107 Identities=13% Similarity=0.239 Sum_probs=91.2
Q ss_pred ecccccc-ChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC-C------HHHHHhcc-CCCceEEEEEEeEeCCC
Q psy17893 29 CVCPTTL-DSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ-S------FDKFRAQF-RPDERSFGYLRMMTGDE 99 (143)
Q Consensus 29 ~~m~~~~-~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~-G------l~El~~~L-~dd~v~Ygl~Rv~~~d~ 99 (143)
|+|+..+ .+++|.++|+++|.++ ++|++|++++++|++..+|. + ++||++.| ++++++|+++|+....+
T Consensus 1 Msm~SGi~v~~e~~~~f~~~k~~k--~~~ii~~i~~~~ivv~~~~~~~~~~~~~~~e~~~~l~~~~~~rY~~~~~~~~~~ 78 (142)
T 1m4j_A 1 MSHQTGIQASEDVKEIFARARNGK--YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLLEDKQPCYVLFRLDSQNA 78 (142)
T ss_dssp ------CCBCHHHHHHHHHHHTTT--CSEEEEEECSSSEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEET
T ss_pred CCCcCCCeECHHHHHHHHHHhcCC--eEEEEEEEcCCEEEEEeecCCCccccccHHHHHHhhCCCCCceEEEEEcCcCCC
Confidence 4555433 6899999999999875 89999999998999998887 4 89999998 68999999999984332
Q ss_pred CcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893 100 MSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKF 139 (143)
Q Consensus 100 ~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh 139 (143)
.+.|+|||+|+|+++++.+||.|+++++.+++.|++.|
T Consensus 79 --~~~k~vfI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~ 116 (142)
T 1m4j_A 79 --QGYEWIFIAWSPDHSHVRQKMLYAATRATLKKEFGGGH 116 (142)
T ss_dssp --TEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred --CCceEEEEEEcCCCCCHHHHHHHHHHHHHHHHHcCCce
Confidence 36999999999999999999999999999999999887
No 12
>2d8b_A Twinfilin-1; cell-free protein synthesis, actin-binding protein, developmental regulation, cellular remodeling, cytoskeleton, morphology; NMR {Mus musculus}
Probab=99.88 E-value=7e-23 Score=156.05 Aligned_cols=113 Identities=12% Similarity=0.100 Sum_probs=97.5
Q ss_pred hhCCCCCceecccccc--ChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEe
Q psy17893 20 MSVPMTPRKCVCPTTL--DSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRM 94 (143)
Q Consensus 20 ~~~~~~~~~~~m~~~~--~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv 94 (143)
.++..+.|+ |+... .+++|.+||+++|.+ .++|++|+|+++ +|+|..+|. +++||.+.|++++++|++||+
T Consensus 13 ~~~~~~~~~--~sgv~~~v~~e~~~a~~~lk~~--~~~~vifkId~~~~~I~v~~~~~~~~~el~~~Lp~~~pRY~~y~~ 88 (166)
T 2d8b_A 13 VSVDTKHQT--LQGVAFPISRDAFQALEKLSKK--QLNYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLY 88 (166)
T ss_dssp CSCCCCCSC--SCCCCCCBCHHHHHHHHHHHTT--CCSCCEEEEETTTTEEEEEECCCCCSTTHHHHSCSSCCEEEEEEE
T ss_pred cccccCccc--cCCcccCcCHHHHHHHHHHHcC--CCcEEEEEEeCCCCEEEEEecCCCCHHHHHHhCCCCCceEEEEec
Confidence 344455554 55444 599999999999996 689999999883 799999888 899999999999999999999
Q ss_pred EeCCCCcceeeEEEEEeecC-CcccccceeeeecHHHHHhhcc
Q psy17893 95 MTGDEMSRRLKFLLITWVGC-EVGVIQRAKVSIDKALVKSVIT 136 (143)
Q Consensus 95 ~~~d~~s~r~KfVfI~WiGe-~V~~~~Kar~s~hk~~Vk~~~~ 136 (143)
....++.++.|+|||.|||+ ++++..||.|+++|+.+++.++
T Consensus 89 ~~~~~~~~~~k~vFI~w~P~~~~~ik~KMlYAssk~~l~~~l~ 131 (166)
T 2d8b_A 89 KHSHEGDYLESVVFIYSMPGYTCSIRERMLYSSCKSPLLEIVE 131 (166)
T ss_dssp EEEETTEEEEEEEEEEECCCSSSCHHHHHHHHHTTHHHHHHHT
T ss_pred cccCCCCccccEEEEEECCCCCCCHHHeeehhhhHHHHHHHHh
Confidence 84333347999999999999 9999999999999999999999
No 13
>1v6f_A MGMF-beta, GLIA maturation factor, beta; actin binding protein, cytoskeleton, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.109.1.2
Probab=99.88 E-value=1.4e-22 Score=151.98 Aligned_cols=104 Identities=10% Similarity=0.007 Sum_probs=93.0
Q ss_pred ChHHHHHHHHHHHcCCC-CccEEEEEeeCC--eEEEeeecC--CHHHHHhccCCCceEEEEEEeE-eCCCCcceeeEEEE
Q psy17893 36 DSKSIKSAYEDVRSDAS-QTQWAVFKYQDS--KISCTARGQ--SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLKFLLI 109 (143)
Q Consensus 36 ~~~~i~~A~~~Vr~d~~-~~nWilf~y~~~--~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~KfVfI 109 (143)
.+++|.+||+++|.+++ .++|++|+|+++ +|+|..+|. +++||.++|++++++|+++|+. ...+++.+.|+|||
T Consensus 16 v~~e~~~a~~~lr~~k~~~~~~iifki~~~~~~I~v~~~~~~~~~~el~~~Lp~~~prY~~~~~~~~~~~~~~~~k~vfI 95 (151)
T 1v6f_A 16 VAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSPDELKDELPERQPRFIVYSYKYQHDDGRVSYPLCFI 95 (151)
T ss_dssp ECHHHHHHHHHHHTCCCSSCEEEEEEECSSSCEEEEEEEEESCCHHHHGGGSCSSSCEEEEEECCEECTTSCEECCEEEE
T ss_pred ECHHHHHHHHHHHhccCCCccEEEEEEcCCCcEEEEEecCCCCCHHHHHhhCCCCCceEEEEecccccCCCcccccEEEE
Confidence 57899999999999774 689999999884 699988774 8999999999999999999998 34556779999999
Q ss_pred EeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 110 TWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 110 ~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
.|||+++++..||.|+++++.+++.+ ++|+
T Consensus 96 ~w~P~~a~vk~KMlYAssk~~l~~~l-gi~~ 125 (151)
T 1v6f_A 96 FSSPVGCKPEQQMMYAGSKNKLVQTA-ELTK 125 (151)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHHT-TCSE
T ss_pred EECCCCCChHHheehHHHHHHHHHHh-CCeE
Confidence 99999999999999999999999999 5654
No 14
>2w0i_A Twinfilin-2; cytoskeleton, actin-binding, actin binding, cofilin-like, phosphoprotein, phosphorylation, transferase, protein tyros kinase-9; 1.8A {Homo sapiens}
Probab=99.88 E-value=1.2e-22 Score=149.50 Aligned_cols=98 Identities=9% Similarity=0.107 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEeec
Q psy17893 37 SKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVG 113 (143)
Q Consensus 37 ~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiG 113 (143)
+++|.+||+++|.++ ++|++|+++++ +|+|..+|. +++||.+.|++++++|+++|+....+++.+.|+|||.|||
T Consensus 5 ~~e~~~a~~~lk~~~--~~~ii~~id~~~~~I~v~~~~~~~~~el~~~Lp~~~~rY~~y~~~~~~~~~~~~k~vfI~w~P 82 (135)
T 2w0i_A 5 QPEAQRALQQLKQKM--VNYIQMKLDLERETIELVHTEPTDVAQLPSRVPRDAARYHFFLYKHTHEGDPLESVVFIYSMP 82 (135)
T ss_dssp CHHHHHHHHHHHTTS--CSEEEEEEETTTTEEEEEECCCCCGGGGGGGSCSSSCEEEEEEEEEEETTEEEEEEEEEEECC
T ss_pred CHHHHHHHHHHHcCC--CcEEEEEEeCCCCEEEEEecCCCCHHHHHhhCCCCCcEEEEEecccccCCCCCccEEEEEECC
Confidence 789999999999965 99999999874 799998888 8999999999999999999999544455899999999999
Q ss_pred C-CcccccceeeeecHHHHHhhcc
Q psy17893 114 C-EVGVIQRAKVSIDKALVKSVIT 136 (143)
Q Consensus 114 e-~V~~~~Kar~s~hk~~Vk~~~~ 136 (143)
+ ++++..||.||++++.+++.++
T Consensus 83 ~~~~~vk~kMlYassk~~l~~~l~ 106 (135)
T 2w0i_A 83 GYKCSIKERMLYSSCKSRLLDSVE 106 (135)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHhHhHHhHHHHHHHHh
Confidence 9 9999999999999999999998
No 15
>2lj8_A Cofilin/actin depolymerizing factor, putative; protein binding; NMR {Trypanosoma brucei}
Probab=99.88 E-value=2.6e-22 Score=149.53 Aligned_cols=112 Identities=13% Similarity=0.187 Sum_probs=98.6
Q ss_pred eeccccccChHHHHHHHHHHHcCCCCccEEEEEeeCC-eEEEeeecC---CHHHHHhccCCCceEEEEEEeEeCCCCcce
Q psy17893 28 KCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDS-KISCTARGQ---SFDKFRAQFRPDERSFGYLRMMTGDEMSRR 103 (143)
Q Consensus 28 ~~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~-~l~l~~~G~---Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r 103 (143)
-|+|+..--+++|.+||++++..+ ++|++|..+++ ++++...|. +++||.+.|++++++|+++|+....+++.+
T Consensus 8 ~Ma~SGi~vsde~~~af~~lk~~k--~~~ii~~i~d~~~~vv~~~~~~~~~~de~~~~L~~~~prY~~y~~~~~~~~~~~ 85 (144)
T 2lj8_A 8 HMAMSGVSVADECVTALNDLRHKK--SRYVIMHIVDQKSIAVKTIGERGANFDQFIEAIDKNVPCYAAFDFEYTTNDGPR 85 (144)
T ss_dssp -CCCSSCEECHHHHHHHHHHTTTS--SSEEEEEEETTTEEEEEEECSSCCCHHHHHHHCCSSSCEEEEEEEEECSSSSSE
T ss_pred ccccCCceeCHHHHHHHHHHhcCC--ceEEEEEEECCcEEEEEecCCCCCCHHHHHHhCcccCCcceeeeeeeccCCCCc
Confidence 489987777899999999999754 79999999775 666666554 799999999999999999999966666778
Q ss_pred eeEEEEEeecCCcccccceeeeecHHHHHhhccCCccc
Q psy17893 104 LKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFKF 141 (143)
Q Consensus 104 ~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~~ 141 (143)
.|+|||.|||+++|+..||.|+++++++++.|+++|.+
T Consensus 86 ~k~vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~~~~~i 123 (144)
T 2lj8_A 86 DKLILISWNPDSGAPRTKMLYSSSRDALVPLTQGFQGI 123 (144)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHHHHTTTSEEE
T ss_pred ccEEEEEEcCCCCCHHHHHHHHHHHHHHHHHhCCeeEE
Confidence 99999999999999999999999999999999999864
No 16
>1vkk_A GMF-gamma, GLIA maturation factor gamma; 15079298, structural GEN JCSG, protein structure initiative, PSI, joint center for S genomics; 1.35A {Mus musculus} SCOP: d.109.1.2 PDB: 1wfs_A 3l50_A
Probab=99.88 E-value=1.5e-22 Score=152.61 Aligned_cols=105 Identities=10% Similarity=-0.004 Sum_probs=92.8
Q ss_pred ccChHHHHHHHHHHHcCC-CCccEEEEEeeCC--eEEEeeecC--CHHHHHhccCCCceEEEEEEeE-eCCCCcceeeEE
Q psy17893 34 TLDSKSIKSAYEDVRSDA-SQTQWAVFKYQDS--KISCTARGQ--SFDKFRAQFRPDERSFGYLRMM-TGDEMSRRLKFL 107 (143)
Q Consensus 34 ~~~~~~i~~A~~~Vr~d~-~~~nWilf~y~~~--~l~l~~~G~--Gl~El~~~L~dd~v~Ygl~Rv~-~~d~~s~r~KfV 107 (143)
.-.+++|.+||+++|.++ ..++|++|+++++ +|+|..+|. +++||.+.|++++++|++||+. ...+++.+.|+|
T Consensus 20 ~~v~~e~~~a~~~lk~~k~~~~~~iifkId~~~~~I~v~~~~~~~~~~e~~~~Lp~~~pRY~vy~~~~~~~~g~~~~klv 99 (154)
T 1vkk_A 20 CEVDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISPEELKLELPERQPRFVVYSYKYVHDDGRVSYPLC 99 (154)
T ss_dssp CEECHHHHHHHHHHHTCCCCSCEEEEEEEETTTTEEEEEEEEESCCHHHHHHHSCSSSCEEEEEECCEECTTSCEECCEE
T ss_pred eeeCHHHHHHHHHHHhcccCCccEEEEEEcCCCCEEEEEEcCCCCCHHHHHHhCCCCCcEEEEEEeeeccCCCcccccEE
Confidence 335889999999999876 3799999999874 798887653 8999999999999999999998 445567899999
Q ss_pred EEEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893 108 LITWVGCEVGVIQRAKVSIDKALVKSVITFKF 139 (143)
Q Consensus 108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh 139 (143)
||.|||+++++..||.||++++.+++.| +.|
T Consensus 100 FI~w~P~~a~vk~KMlYAssk~~l~~~l-gi~ 130 (154)
T 1vkk_A 100 FIFSSPVGCKPEQQMMYAGSKNRLVQTA-ELT 130 (154)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHHHT-TCC
T ss_pred EEEECCCCCChhhhhhhHhhHHHHHHhh-Cce
Confidence 9999999999999999999999999999 554
No 17
>1ak6_A Destrin; actin depolymerization factor, actin-binding protein; NMR {Homo sapiens} SCOP: d.109.1.2 PDB: 1ak7_A 1q8g_A 1q8x_A 3j0s_M
Probab=99.87 E-value=9.9e-24 Score=161.81 Aligned_cols=117 Identities=11% Similarity=0.186 Sum_probs=100.4
Q ss_pred CCCceeccccccC-hHHHHHHHHHHHcCCC--------CccEEEEEeeCC--eEEEeee--------c---C-CHHHHHh
Q psy17893 24 MTPRKCVCPTTLD-SKSIKSAYEDVRSDAS--------QTQWAVFKYQDS--KISCTAR--------G---Q-SFDKFRA 80 (143)
Q Consensus 24 ~~~~~~~m~~~~~-~~~i~~A~~~Vr~d~~--------~~nWilf~y~~~--~l~l~~~--------G---~-Gl~El~~ 80 (143)
.+||.|+|+..+. +++|.++|+++|.+++ .++|++|+++++ .|++... | . +++||++
T Consensus 3 ~~~~~m~m~SGi~vs~e~~~~f~~~k~~ks~~~~~~~~~~~~iifki~~~~~~Iivee~~~~~~~~~g~~~~~~~~ef~~ 82 (174)
T 1ak6_A 3 ITPSSGNSASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVGVTITDPFKHFVG 82 (174)
T ss_dssp CCCCCSTTTTCCCCCSHHHHHHHHTSSSCCSSHHHHGGGCCCEECCCSTTSCSCCCCSSCCCCSSSTTTTCCSSSHHHHH
T ss_pred cCcCcccccCCCccCHHHHHHHHHHHcCCcccccccccceeEEEEEECCCCcEEEEeccccccccccCcccCCCHHHHHH
Confidence 3678899886555 9999999999999864 688999999884 5777652 3 3 7999999
Q ss_pred ccCCCceEEEEEEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 81 QFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 81 ~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
.|++++++|++||+.....++.+.|+|||.|||+++++.+||.||++++.+++.|+++|+
T Consensus 83 ~L~~~~prY~ly~~~~~~~~~~~~klvfI~W~Pd~a~vk~KMlYAssk~~lk~~l~gi~~ 142 (174)
T 1ak6_A 83 MLPEKDCRYALYDASFETKESRKEELMFFLWAPELAPLKSKMIYASSKDAIKKKFQGIKH 142 (174)
T ss_dssp TSCSSCCCCEECCCCCCCSSCSCCCCCEEEECCSSSCHHHHHSHHHHHHHHHHHCTTCSC
T ss_pred hCCCCCcEEEEEeCcccCCCCccccEEEEEECCCCCCHHHhhHHHHHHHHHHHHhcCCeE
Confidence 999999999999997433345899999999999999999999999999999999988764
No 18
>2vac_A Twinfilin-2; transferase, actin binding, phosphorylation, cofilin-like, cytoskeleton, actin-binding, protein tyrosine kinase-9; 1.70A {Homo sapiens}
Probab=99.86 E-value=5.6e-22 Score=145.59 Aligned_cols=100 Identities=12% Similarity=0.225 Sum_probs=90.4
Q ss_pred ChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC-C------HHHHHhcc-CCCceEEEEEEeEeCCCCcceeeEE
Q psy17893 36 DSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ-S------FDKFRAQF-RPDERSFGYLRMMTGDEMSRRLKFL 107 (143)
Q Consensus 36 ~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~-G------l~El~~~L-~dd~v~Ygl~Rv~~~d~~s~r~KfV 107 (143)
-+++|.++|+++|.++ ++|++|++++++|++..+|. + ++||++.| ++++++|+++|+....+ .+.|+|
T Consensus 6 v~~e~~~~f~~~k~~k--~r~ii~~i~~~~ivv~~~~~~~~~~~~~~~~~~~~l~~~~~prY~v~~~~~~~~--~~~k~v 81 (134)
T 2vac_A 6 ATEELKEFFAKARAGS--VRLIKVVIEDEQLVLGASQEPVGRWDQDYDRAVLPLLDAQQPCYLLYRLDSQNA--QGFEWL 81 (134)
T ss_dssp ECHHHHHHHHHHHHSS--CSEEEEEEETTEEEEEEEECCCSCHHHHHHHHHGGGCCTTCCEEEEEEEEEEET--TEEEEE
T ss_pred eCHHHHHHHHHHhcCC--eEEEEEEecCCEEEEEeecCcCcccccCHHHHHHhcCCCCCCEEEEEECCcCCC--CCceEE
Confidence 4799999999999876 89999999999999998887 4 79999998 68999999999984332 259999
Q ss_pred EEEeecCCcccccceeeeecHHHHHhhccCCc
Q psy17893 108 LITWVGCEVGVIQRAKVSIDKALVKSVITFKF 139 (143)
Q Consensus 108 fI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh 139 (143)
||+|+|+++++.+||.||++++.+++.|++.|
T Consensus 82 fI~w~Pd~a~vr~KMlYAssk~~lk~~l~g~~ 113 (134)
T 2vac_A 82 FLAWSPDNSPVRLKMLYAATRATVKKEFGGGH 113 (134)
T ss_dssp EEEECCTTSCHHHHHHHHHHHHHHHHHHCGGG
T ss_pred EEEEcCCCCCHHHHhHHHHHHHHHHHHcCCCe
Confidence 99999999999999999999999999999877
No 19
>1tvj_A Cofilin; ADF, actin binding protein, actin depolymerizing factor, actin-binding protein; NMR {Gallus gallus}
Probab=99.86 E-value=9e-22 Score=149.79 Aligned_cols=107 Identities=12% Similarity=0.202 Sum_probs=92.8
Q ss_pred ccChHHHHHHHHHHHcCCC--------CccEEEEEeeCC--eEEEee--------ec---C-CHHHHHhccCCCceEEEE
Q psy17893 34 TLDSKSIKSAYEDVRSDAS--------QTQWAVFKYQDS--KISCTA--------RG---Q-SFDKFRAQFRPDERSFGY 91 (143)
Q Consensus 34 ~~~~~~i~~A~~~Vr~d~~--------~~nWilf~y~~~--~l~l~~--------~G---~-Gl~El~~~L~dd~v~Ygl 91 (143)
..-+++|.++|+++|.+++ .++|++|+++++ .|++.+ .| . +++||++.|++++++|++
T Consensus 5 i~vs~e~~~~f~~~k~~k~~~~~~~~~~~~~iifki~~~~~~iivee~~~~~~~~~~~~~~~~~~ef~~~L~~~~prY~v 84 (166)
T 1tvj_A 5 VTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDIGDTVEDPYTAFVKLLPLNDCRYAL 84 (166)
T ss_dssp CEECHHHHHHHHHHHSCCCSCHHHHTTCEEEEEEEECTTSSEEEEEEEEEEETTTBTTTBSCHHHHHHHHCCTTSCEEEE
T ss_pred CeeCHHHHHHHHHHhcCCCccccccccceeEEEEEECCCCcEEEEeccccccccccCccccCCHHHHHHhCCCCCcEEEE
Confidence 3358999999999999864 689999999884 677776 45 3 799999999999999999
Q ss_pred EEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 92 LRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 92 ~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
||+.....++.+.|+|||.|||+++++.+||.||++++.+++.|++.|+
T Consensus 85 y~~~~~~~~~~~~klvfI~W~Pd~a~vr~KMlYAssk~~lk~~l~gi~~ 133 (166)
T 1tvj_A 85 YDATYETKESKKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKH 133 (166)
T ss_dssp EEEEEEESSCEEEEEEEEEECCTTSCHHHHHHHHHHHHHHHHTTTTCCC
T ss_pred EeccccCCCCCccCEEEEEECCCCCCHHHhhHHHHhHHHHHHHhcCCeE
Confidence 9998432235899999999999999999999999999999999988764
No 20
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=99.86 E-value=7.2e-22 Score=146.94 Aligned_cols=103 Identities=17% Similarity=0.291 Sum_probs=91.6
Q ss_pred ecccccc-ChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceeeE
Q psy17893 29 CVCPTTL-DSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKF 106 (143)
Q Consensus 29 ~~m~~~~-~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~Kf 106 (143)
|+|+..+ .+++|.+||+++|.++ .++|++|++++++|++..+|+ +++||.+.|++++++|++|| + + .|+
T Consensus 20 ~~m~sGi~vs~e~~~af~~lk~~k-~~~~ii~~I~~~eivv~~~g~~~~~el~~~Lp~~~prY~~y~----d-g---~k~ 90 (139)
T 2l72_A 20 RHMASGMGVDENCVARFNELKIRK-TVKWIVFKIENTKIVVEKDGKGNADEFRGALPANDCRFGVYD----C-G---NKI 90 (139)
T ss_dssp --CCTTCEECHHHHHHHHHHTTTT-CCCEEEEEEETTEEEEEEEESSHHHHHHHHCCCCSCCEEEEE----C-S---SCE
T ss_pred ccccCCCCcCHHHHHHHHHHhCCC-CeeEEEEEEcCCEEEEeecCCCCHHHHHHhCCCCCcEEEEEc----C-C---CcE
Confidence 5555433 6999999999999876 689999999998899988888 89999999999999999999 2 2 799
Q ss_pred EEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 107 LLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 107 VfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
|||.|||+++++.+||.|+++++.+++.|++.|.
T Consensus 91 vFI~w~Pd~a~vk~KMlYASsk~~lk~~l~g~~v 124 (139)
T 2l72_A 91 QFVLWCPDNAPVKPRMTYASSKDALLKKLDGATA 124 (139)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHHHHHHHCSCCS
T ss_pred EEEEECCCCCChhHeeehHhhHHHHHHHhCCceE
Confidence 9999999999999999999999999999998764
No 21
>3q2b_A Pfadf1, cofilin/actin-depolymerizing factor homolog 1; actin regulator, actin-binding protein; HET: TAR; 1.60A {Plasmodium falciparum} PDB: 2xf1_A
Probab=99.79 E-value=1.1e-19 Score=132.43 Aligned_cols=100 Identities=9% Similarity=0.149 Sum_probs=91.1
Q ss_pred ccccChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC--CHHHHHhccCCCc---eEEEEEEeEeCCCCcceeeE
Q psy17893 32 PTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ--SFDKFRAQFRPDE---RSFGYLRMMTGDEMSRRLKF 106 (143)
Q Consensus 32 ~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~--Gl~El~~~L~dd~---v~Ygl~Rv~~~d~~s~r~Kf 106 (143)
+...-+++|.++++++|.++ .++|++|++++++|++..+|. .++||.+.|++++ ++|+++|+ +.|+
T Consensus 5 SGi~vs~e~~~~f~~lk~~k-~~~~ii~kI~~~~ivv~~~~~~~~~~~f~~~Lp~~~~~~prY~vy~~--------~~k~ 75 (124)
T 3q2b_A 5 SGIRVNDNCVTEFNNMKIRK-TCGWIIFVIQNCEIIIHSKGASTTLTELVQSIDKNNEIQCAYVVFDA--------VSKI 75 (124)
T ss_dssp CSCEECHHHHHHHHHHHHHT-SSEEEEEEEETTEEEEEEEEECSCHHHHHHHHHHCTTCSEEEEEEEC--------SSCE
T ss_pred CCCccCHHHHHHHHHHhcCC-CcEEEEEEEcCCEEEEeccCCCCCHHHHHHHccccCCCCcEEEEEec--------CCCE
Confidence 34446899999999999865 489999999999999988886 8999999999999 99999998 4799
Q ss_pred EEEEeecCCcccccceeeeecHHHHHhhccCCcc
Q psy17893 107 LLITWVGCEVGVIQRAKVSIDKALVKSVITFKFK 140 (143)
Q Consensus 107 VfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~yh~ 140 (143)
|||.|||+++++..||.||+.++.+++.|++.|.
T Consensus 76 vfI~w~Pd~a~vk~KMlYASsk~~l~~~l~g~~~ 109 (124)
T 3q2b_A 76 HFFMYARESSNSRDRMTYASSKQAILKKIEGVNV 109 (124)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHHTTSTTSEE
T ss_pred EEEEECCCCCChhHhhhhHHHHHHHHHHhCCCce
Confidence 9999999999999999999999999999999885
No 22
>3daw_B Twinfilin-1, protein A6; actin depolymerisation, actin binding proteins, cytoskeleton, structural protein/contractIle protein complex; HET: ATP; 2.55A {Mus musculus} PDB: 2hd7_A
Probab=99.66 E-value=2.4e-16 Score=119.93 Aligned_cols=99 Identities=11% Similarity=0.106 Sum_probs=86.9
Q ss_pred ChHHHHHHHHHHHcCCCCccEEEEEeeCC--eEEEeeecC-CHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEee
Q psy17893 36 DSKSIKSAYEDVRSDASQTQWAVFKYQDS--KISCTARGQ-SFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWV 112 (143)
Q Consensus 36 ~~~~i~~A~~~Vr~d~~~~nWilf~y~~~--~l~l~~~G~-Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~Wi 112 (143)
-+++|.+||+++|.+ ..+|++|+++.+ +|+|..++. +++||.+.|++++++|++||+....++....+.|||.||
T Consensus 24 v~~e~~~a~~~lk~~--~~~~iifkId~~~e~I~v~~~~~~~~~df~~~Lp~~~pRY~vyd~~~~~~g~~~~~~ifi~~~ 101 (164)
T 3daw_B 24 ISRDAFQALEKLSKK--QLNYVQLEIDIKNETIILANTENTELRDLPKRIPKDSARYHFFLYKHSHEGDYLESVVFIYSM 101 (164)
T ss_dssp BCHHHHHHHHHHHTT--SCSEEEEEEETTTTEEEEEECCCCCGGGSGGGSCSSSCEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred ECHHHHHHHHHHHcC--CceEEEEEEeCCCCEEEEEeCCCCCHHHHHHhCCccCceEEEEecccccCCCccccEEEEEEc
Confidence 488999999999986 489999999874 788877754 899999999999999999999953334456778999999
Q ss_pred cC-CcccccceeeeecHHHHHhhcc
Q psy17893 113 GC-EVGVIQRAKVSIDKALVKSVIT 136 (143)
Q Consensus 113 Ge-~V~~~~Kar~s~hk~~Vk~~~~ 136 (143)
|+ ++++..||.||+.|+.+++.++
T Consensus 102 P~~~a~ik~kMlYASsK~~l~~~l~ 126 (164)
T 3daw_B 102 PGYTCSIRERMLYSSCKSPLLEIVE 126 (164)
T ss_dssp CSTTSCHHHHHHHHHTHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhHHHHHHHHh
Confidence 99 9999999999999999999987
No 23
>2vik_A Villin 14T; actin-binding protein, capping protein, calcium-binding protein, cytoskeletal protein; NMR {Gallus gallus} SCOP: d.109.1.1 PDB: 2vil_A
Probab=34.89 E-value=40 Score=23.60 Aligned_cols=55 Identities=7% Similarity=0.089 Sum_probs=39.5
Q ss_pred HhccCCCceEEEEEEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhccC
Q psy17893 79 RAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVITF 137 (143)
Q Consensus 79 ~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~~ 137 (143)
-.+|-+++++-.++... .+.+.+++.-.|+|.+++.-.++.++.+.-.+.+.+.+
T Consensus 36 ~G~Fy~gd~YIvl~t~~----~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lgg 90 (126)
T 2vik_A 36 YGNFYEGDCYVLLSTRK----TGSGFSYNIHYWLGKNSSQDEQGAAAIYTTQMDEYLGS 90 (126)
T ss_dssp TTCCCSSSCEEEEEEEE----CSSSEEEEEEEEECTTSCHHHHHHHHHHHHHHHHHTTS
T ss_pred cCeeCCCCeEEEEEecc----CCCceeEEEEEEeCCCCCchhHHHHHHHHHHHHHHcCC
Confidence 44566666654444332 23356889999999999999999888888888777653
No 24
>1t44_G Chimera of gelsolin domain 1 and C-terminal domain of thymosin beta-4; structural protein; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1
Probab=31.98 E-value=42 Score=24.18 Aligned_cols=55 Identities=13% Similarity=0.164 Sum_probs=40.1
Q ss_pred HhccCCCceEEEEEEeEeCCCCcceeeEEEEEeecCCcccccceeeeecHHHHHhhcc
Q psy17893 79 RAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQRAKVSIDKALVKSVIT 136 (143)
Q Consensus 79 ~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~Kar~s~hk~~Vk~~~~ 136 (143)
-.+|-+++++-.++.... .+.+.++++-.|+|.+++.-.++.++.+.-.+.+.+.
T Consensus 35 ~G~Fy~gd~YIvl~ty~~---~~g~~~~~i~~W~G~~ss~de~g~Aa~~aveLd~~lg 89 (147)
T 1t44_G 35 YGDFFTGDAYVILKTVQL---RNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLN 89 (147)
T ss_dssp TTEEETTCEEEEEEEEEC---TTSCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred cCeecCCCeEEEEEEEec---CCCceEEEEEEEeCCCCChhHHHHHHHHHHHHHHHcC
Confidence 456776766555554432 1235688999999999999999988888888877765
No 25
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=30.84 E-value=1.2e+02 Score=20.32 Aligned_cols=72 Identities=13% Similarity=0.279 Sum_probs=51.7
Q ss_pred hhHHHHhhhhhhhhCCCCCceeccccccChHHHHHHHHHHHcCCCCccEEEEEeeCCeEEEeeecC---CHHHHHhccCC
Q psy17893 8 RDLISIMSDLIDMSVPMTPRKCVCPTTLDSKSIKSAYEDVRSDASQTQWAVFKYQDSKISCTARGQ---SFDKFRAQFRP 84 (143)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~~~i~~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~---Gl~El~~~L~d 84 (143)
..+||-...-..--.|+|--+.+- ++.+|+..+..++++.. -+++.-.|. .+.||...-..
T Consensus 12 tniissvqerakhnypgryirtat----ssqdirdiiksmkdngk------------plvvfvngasqndvnefqneakk 75 (112)
T 2lnd_A 12 TNIISSVQERAKHNYPGRYIRTAT----SSQDIRDIIKSMKDNGK------------PLVVFVNGASQNDVNEFQNEAKK 75 (112)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEC----SHHHHHHHHHHHTTCCS------------CEEEEECSCCHHHHHHHHHHHHH
T ss_pred chHHHHHHHHhhcCCCCceeeecc----chhhHHHHHHHHHhcCC------------eEEEEecCcccccHHHHHHHHHh
Confidence 345665555566678888655442 58899999999988542 355555565 68999888888
Q ss_pred CceEEEEEEeE
Q psy17893 85 DERSFGYLRMM 95 (143)
Q Consensus 85 d~v~Ygl~Rv~ 95 (143)
+.+.|-+++-+
T Consensus 76 egvsydvlkst 86 (112)
T 2lnd_A 76 EGVSYDVLKST 86 (112)
T ss_dssp HTCEEEEEECC
T ss_pred cCcchhhhccC
Confidence 88999998865
No 26
>2ff3_A Gelsolin; protein-protein complex, structural protein/contractIle protein complex; HET: ATP; 2.00A {Homo sapiens} SCOP: d.109.1.1 PDB: 2ff6_G*
Probab=27.44 E-value=60 Score=23.55 Aligned_cols=84 Identities=11% Similarity=0.192 Sum_probs=52.3
Q ss_pred HHHHHHHcCCCCccEEEEEeeCCeEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEeecCCcccccc
Q psy17893 42 SAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQR 121 (143)
Q Consensus 42 ~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~K 121 (143)
.+++.+.....-.-|-| ++.+++... ++.-.+|-+++++-.++.... ...+.++++-.|+|.+++.-.+
T Consensus 28 ~~f~~~g~~~gl~VWrI---e~~~~v~vp-----~~~~G~FysgD~YIVl~ty~~---~~g~~~~~IyfW~G~~ss~de~ 96 (150)
T 2ff3_A 28 PEFLKAGKEPGLQIWRV---EKFDLVPVP-----TNLYGDFFTGDAYVILKTVQL---RNGNLQYDLHYWLGNECSQDES 96 (150)
T ss_dssp HHHHHTTSSSEEEEEEE---ETTEEEECC-----GGGTTEEETTSEEEEEEEEEC---TTSSEEEEEEEEECTTCCHHHH
T ss_pred hhhhccCCCCCeEEEEE---eCCEEEECC-----hHHcCeecCCCeEEEEEEEec---CCCceEEEEEEEeCCCCCchhH
Confidence 46666655333345544 343333321 223456776766555554432 1235678999999999999999
Q ss_pred eeeeecHHHHHhhcc
Q psy17893 122 AKVSIDKALVKSVIT 136 (143)
Q Consensus 122 ar~s~hk~~Vk~~~~ 136 (143)
+.++.+.-.+.+.+.
T Consensus 97 gaAA~~aveLd~~lg 111 (150)
T 2ff3_A 97 GAAAIFTVQLDDYLN 111 (150)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 988888777777665
No 27
>3cip_G Gelsolin; actin, dictyostelium discoideum, actin-associated methyl histidine, ATP-binding, cytoskeleton, nucleotide-BIN phosphoprotein; HET: HIC ATP; 1.60A {Homo sapiens} SCOP: d.109.1.1 PDB: 3ci5_G* 1p8z_G* 1d4x_G* 1nlv_G* 1mdu_A* 1nm1_G* 1nmd_G* 1yag_G* 1yvn_G* 3cjb_G* 3cjc_G* 1esv_S* 1eqy_S* 1c0g_S* 1c0f_S* 1dej_S* 3a5l_S* 3a5m_S* 3a5n_S* 3a5o_S*
Probab=27.23 E-value=64 Score=22.58 Aligned_cols=84 Identities=11% Similarity=0.192 Sum_probs=51.4
Q ss_pred HHHHHHHcCCCCccEEEEEeeCCeEEEeeecCCHHHHHhccCCCceEEEEEEeEeCCCCcceeeEEEEEeecCCcccccc
Q psy17893 42 SAYEDVRSDASQTQWAVFKYQDSKISCTARGQSFDKFRAQFRPDERSFGYLRMMTGDEMSRRLKFLLITWVGCEVGVIQR 121 (143)
Q Consensus 42 ~A~~~Vr~d~~~~nWilf~y~~~~l~l~~~G~Gl~El~~~L~dd~v~Ygl~Rv~~~d~~s~r~KfVfI~WiGe~V~~~~K 121 (143)
.+++.+.....-.-|-| ++.+++... ++.-.+|-+++++-.++.... ...+.++++-.|+|.+++.-.+
T Consensus 9 ~~~~~~g~~~gl~vWrI---e~~~~~~vp-----~~~~G~Fy~gd~YIvl~ty~~---~~g~~~~~i~~W~G~~ss~de~ 77 (128)
T 3cip_G 9 PEFLKAGKEPGLQIWRV---EKFDLVPVP-----TNLYGDFFTGDAYVILKTVQL---RNGNLQYDLHYWLGNECSQDES 77 (128)
T ss_dssp HHHHHTTSSSEEEEEEE---ETTEEEECC-----GGGTTEEETTCEEEEEEEEEC---TTSCEEEEEEEEECTTCCHHHH
T ss_pred hhHHhcCCCCCeEEEEE---eCCEEEECC-----hHHcCeecCCCeEEEEEEEec---CCCceEEEEEEEcCCCCCcchH
Confidence 35666554333344544 343333321 223445766666555544432 1235678999999999999999
Q ss_pred eeeeecHHHHHhhcc
Q psy17893 122 AKVSIDKALVKSVIT 136 (143)
Q Consensus 122 ar~s~hk~~Vk~~~~ 136 (143)
+.++.+...+.+.+.
T Consensus 78 g~Aa~~aveLd~~lg 92 (128)
T 3cip_G 78 GAAAIFTVQLDDYLN 92 (128)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 988888877777665
Done!