BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17897
(391 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189235030|ref|XP_972320.2| PREDICTED: similar to RT01016p [Tribolium castaneum]
Length = 353
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/384 (60%), Positives = 242/384 (63%), Gaps = 78/384 (20%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMNGTHGGPNGRPHQMS 68
LFSGLNDGL+SRAEALAAVDI KH +S GGP G P Q+
Sbjct: 47 LFSGLNDGLISRAEALAAVDI-KHQSS----------------------GGPGGLP-QLK 82
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 128
H M +HH
Sbjct: 83 HDMM-----------------------------------------------YHHSMGAPP 95
Query: 129 PASHHHVATPSLLLFPQMSHHGMDGLEMLDSIS-SSMTTLTPMSDPTPNPHQLHSSSMYG 187
P S H +P QM H MDGLEMLD IS SSMTTLTPMS+ + + H + +
Sbjct: 96 PVSRPHQDSP---FMRQMGH--MDGLEMLDPISTSSMTTLTPMSETSSHMHSYGMNHVMN 150
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQR 247
+ H HH A GL HPD DTDPRELEAFAERFKQR
Sbjct: 151 HHHHGGPVAPHPGHHGGHPGAHHPAMAAAAAAAAVAGL-HPDADTDPRELEAFAERFKQR 209
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA
Sbjct: 210 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 269
Query: 308 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 367
QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK
Sbjct: 270 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 329
Query: 368 KNVVRVWFCNQRQKQKRMKFAAQH 391
KNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 330 KNVVRVWFCNQRQKQKRMKFAAQH 353
>gi|157110244|ref|XP_001651018.1| inhibitory pou [Aedes aegypti]
gi|108878787|gb|EAT43012.1| AAEL005507-PA [Aedes aegypti]
Length = 357
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/257 (80%), Positives = 209/257 (81%), Gaps = 17/257 (6%)
Query: 143 FPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHH 200
F HH MD ++MLD S SMTTLTPMSD T HQLH S SMN MM
Sbjct: 110 FSFQMHHTMDSIDMLDP-SGSMTTLTPMSDAPITSTHHQLHGSYH---SMNHMMG----- 160
Query: 201 HHHSGALPASHHHG--ATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVT 254
HHHSG L G HHP M + HPDTDTDPRELEAFAERFKQRRIKLGVT
Sbjct: 161 HHHSGPLGGHTPDGFLGAHHPAMAVAVATAGLHPDTDTDPRELEAFAERFKQRRIKLGVT 220
Query: 255 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 314
QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR
Sbjct: 221 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 280
Query: 315 DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 374
DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW
Sbjct: 281 DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 340
Query: 375 FCNQRQKQKRMKFAAQH 391
FCNQRQKQKRMKFAAQH
Sbjct: 341 FCNQRQKQKRMKFAAQH 357
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/130 (54%), Positives = 79/130 (60%), Gaps = 23/130 (17%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSAS--STPTLPTLKHDMMYHHGMNGTHGGPNGRPHQ 66
+FSGLNDG+LSRAEALAAVDIGKH +S + LKHD+MYHH M+ P RP Q
Sbjct: 51 IFSGLNDGILSRAEALAAVDIGKHQSSHPHSQMTSQLKHDVMYHHSMS----APPQRPLQ 106
Query: 67 MS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGH 118
HH MD ++MLD S SMTTLTPMSD T HQLH S SMN MM
Sbjct: 107 NKPFSFQMHHTMDSIDMLDP-SGSMTTLTPMSDAPITSTHHQLHGSYH---SMNHMMG-- 160
Query: 119 HHHHHHSGAL 128
HHHSG L
Sbjct: 161 ---HHHSGPL 167
>gi|349584651|dbj|BAL03078.1| abnormal chemosensory jump 6, isoform B [Bombyx mori]
Length = 355
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/272 (77%), Positives = 218/272 (80%), Gaps = 16/272 (5%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQ 179
+HH G P H A P FPQM HHGM+G++MLD + SSSMTTL PM + P HQ
Sbjct: 99 YHHGVGGPPP---HNARPHQPFFPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQ 155
Query: 180 LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEA 239
LH YG +MN +M HHH A PA H P HPDTDTDPRELEA
Sbjct: 156 LHG---YG-AMNHVMNHHHHPGGLGHAPPAHLGH--------PAAALHPDTDTDPRELEA 203
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ
Sbjct: 204 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 263
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 359
AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI A
Sbjct: 264 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITA 323
Query: 360 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 324 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 355
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 74/105 (70%), Gaps = 15/105 (14%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA--SSTPTLPTLKHDMMYHHGMNGTHGGP---NGR 63
+F GLNDGLLSRAEALAAVDIGKH + P LP LKHDM+YHHG+ GGP N R
Sbjct: 57 IFGGLNDGLLSRAEALAAVDIGKHQSGPQPGPPLPQLKHDMVYHHGV----GGPPPHNAR 112
Query: 64 PH-----QMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLH 102
PH QM HHGM+G++MLD + SSSMTTL PM + P HQLH
Sbjct: 113 PHQPFFPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLH 157
>gi|349584655|dbj|BAL03080.1| abnormal chemosensory jump 6, isoform D [Bombyx mori]
Length = 336
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/272 (77%), Positives = 218/272 (80%), Gaps = 16/272 (5%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQ 179
+HH G P H A P FPQM HHGM+G++MLD + SSSMTTL PM + P HQ
Sbjct: 80 YHHGVGGPPP---HNARPHQPFFPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQ 136
Query: 180 LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEA 239
LH YG +MN +M HHH A PA H P HPDTDTDPRELEA
Sbjct: 137 LHG---YG-AMNHVMNHHHHPGGLGHAPPAHLGH--------PAAALHPDTDTDPRELEA 184
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ
Sbjct: 185 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 244
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 359
AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI A
Sbjct: 245 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITA 304
Query: 360 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 305 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 336
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 74/105 (70%), Gaps = 15/105 (14%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA--SSTPTLPTLKHDMMYHHGMNGTHGGP---NGR 63
+F GLNDGLLSRAEALAAVDIGKH + P LP LKHDM+YHHG+ GGP N R
Sbjct: 38 IFGGLNDGLLSRAEALAAVDIGKHQSGPQPGPPLPQLKHDMVYHHGV----GGPPPHNAR 93
Query: 64 PH-----QMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLH 102
PH QM HHGM+G++MLD + SSSMTTL PM + P HQLH
Sbjct: 94 PHQPFFPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLH 138
>gi|358350601|dbj|BAL15791.1| abnormal chemosensory jump 6, splice form A, partial [Bombyx mori]
Length = 241
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 203/251 (80%), Positives = 210/251 (83%), Gaps = 13/251 (5%)
Query: 142 LFPQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHH 200
FPQM HHGM+G++MLD + SSSMTTL PM + P HQLH YG +MN +M HHH
Sbjct: 3 FFPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLHG---YG-AMNHVMNHHHHP 58
Query: 201 HHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK 260
A PA H P HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK
Sbjct: 59 GGLGHAPPAHLGH--------PAAALHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK 110
Query: 261 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 320
ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS
Sbjct: 111 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 170
Query: 321 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDLKKNVVRVWFCNQRQ
Sbjct: 171 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQ 230
Query: 381 KQKRMKFAAQH 391
KQKRMKFAAQH
Sbjct: 231 KQKRMKFAAQH 241
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 31/44 (70%), Gaps = 4/44 (9%)
Query: 66 QMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLHSSSMYG 108
QM HHGM+G++MLD + SSSMTTL PM + P HQLH YG
Sbjct: 6 QMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLHG---YG 46
>gi|242017557|ref|XP_002429254.1| Inhibitory POU protein, putative [Pediculus humanus corporis]
gi|212514150|gb|EEB16516.1| Inhibitory POU protein, putative [Pediculus humanus corporis]
Length = 296
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 206/260 (79%), Positives = 209/260 (80%), Gaps = 14/260 (5%)
Query: 145 QMSHHGMDGLEMLDSISS-SMTTLTPMSDPTPNPH-QLHSSSMYGPSMNSMMTGHHHHHH 202
QM HHGMDGLEMLD IS+ SMTTLTPMSD + H QLHSS MYGP MN M HHHH
Sbjct: 38 QMGHHGMDGLEMLDPISTTSMTTLTPMSDTSGGGHHQLHSS-MYGPGMNMMTGHHHHHGG 96
Query: 203 HSGALPASHHHGATHHPVMPPGLQHP-----------DTDTDPRELEAFAERFKQRRIKL 251
G H + D DTDPRELEAFAERFKQRRIKL
Sbjct: 97 TLGGPTGHHGGHHHPAHAHHSAMAAAAAAAAAAGLHPDADTDPRELEAFAERFKQRRIKL 156
Query: 252 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 311
GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN
Sbjct: 157 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 216
Query: 312 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV
Sbjct: 217 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 276
Query: 372 RVWFCNQRQKQKRMKFAAQH 391
RVWFCNQRQKQKRMKFAAQH
Sbjct: 277 RVWFCNQRQKQKRMKFAAQH 296
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/89 (73%), Positives = 69/89 (77%), Gaps = 5/89 (5%)
Query: 29 IGKHSASSTPTLPTLKHDMMYHHGMNGTH-GGPNGRPHQMSHHGMDGLEMLDSIS-SSMT 86
+GKH S+TP LP LKHDMMYHHGM GTH G PN R HQM HHGMDGLEMLD IS +SMT
Sbjct: 1 MGKHPVSTTPGLPQLKHDMMYHHGM-GTHPGTPNSRSHQMGHHGMDGLEMLDPISTTSMT 59
Query: 87 TLTPMSDPTPNP-HQLHSSSMYGPSMNSM 114
TLTPMSD + HQLH SSMYGP MN M
Sbjct: 60 TLTPMSDTSGGGHHQLH-SSMYGPGMNMM 87
>gi|349584649|dbj|BAL03077.1| abnormal chemosensory jump 6, isoform A [Bombyx mori]
Length = 356
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 203/251 (80%), Positives = 210/251 (83%), Gaps = 13/251 (5%)
Query: 142 LFPQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHH 200
FPQM HHGM+G++MLD + SSSMTTL PM + P HQLH YG +MN +M HHH
Sbjct: 118 FFPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLHG---YG-AMNHVMNHHHHP 173
Query: 201 HHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK 260
A PA H P HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK
Sbjct: 174 GGLGHAPPAHLGH--------PAAALHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK 225
Query: 261 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 320
ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS
Sbjct: 226 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 285
Query: 321 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDLKKNVVRVWFCNQRQ
Sbjct: 286 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQ 345
Query: 381 KQKRMKFAAQH 391
KQKRMKFAAQH
Sbjct: 346 KQKRMKFAAQH 356
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 16/106 (15%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA--SSTPTLPTLKHDMMYHHGMNGTHGGP---NGR 63
+F GLNDGLLSRAEALAAVDIGKH + P LP LKHDM+YHHG+ GGP N R
Sbjct: 57 IFGGLNDGLLSRAEALAAVDIGKHQSGPQPGPPLPQLKHDMVYHHGV----GGPPPHNAR 112
Query: 64 PH------QMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLH 102
PH QM HHGM+G++MLD + SSSMTTL PM + P HQLH
Sbjct: 113 PHQKPFFPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLH 158
>gi|270004858|gb|EFA01306.1| abnormal chemosensory jump 6 [Tribolium castaneum]
Length = 365
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 228/384 (59%), Positives = 239/384 (62%), Gaps = 85/384 (22%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMNGTHGGPNGRPHQMS 68
LFSGLNDGL+SRAEALAAVD +KH + GGP G P Q+
Sbjct: 66 LFSGLNDGLISRAEALAAVD--------------IKHQ---------SSGGPGGLP-QLK 101
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 128
H M +HH
Sbjct: 102 HDMM-----------------------------------------------YHHSMGAPP 114
Query: 129 PASHHHVATPSLLLFPQMSHHGMDGLEMLDSIS-SSMTTLTPMSDPTPNPHQLHSSSMYG 187
P S H QM H MDGLEMLD IS SSMTTLTPMS+ + + H + +
Sbjct: 115 PVSRPH----------QMGH--MDGLEMLDPISTSSMTTLTPMSETSSHMHSYGMNHVMN 162
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQR 247
+ H HH A GL HPD DTDPRELEAFAERFKQR
Sbjct: 163 HHHHGGPVAPHPGHHGGHPGAHHPAMAAAAAAAAVAGL-HPDADTDPRELEAFAERFKQR 221
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA
Sbjct: 222 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 281
Query: 308 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 367
QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK
Sbjct: 282 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 341
Query: 368 KNVVRVWFCNQRQKQKRMKFAAQH 391
KNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 342 KNVVRVWFCNQRQKQKRMKFAAQH 365
>gi|349584653|dbj|BAL03079.1| abnormal chemosensory jump 6, isoform C [Bombyx mori]
Length = 350
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 209/272 (76%), Positives = 217/272 (79%), Gaps = 21/272 (7%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQ 179
+HH G P H A P PQM HHGM+G++MLD + SSSMTTL PM + P HQ
Sbjct: 99 YHHGVGGPPP---HNARP-----PQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQ 150
Query: 180 LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEA 239
LH YG +MN +M HHH A PA H P HPDTDTDPRELEA
Sbjct: 151 LHG---YG-AMNHVMNHHHHPGGLGHAPPAHLGH--------PAAALHPDTDTDPRELEA 198
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ
Sbjct: 199 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 258
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 359
AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI A
Sbjct: 259 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITA 318
Query: 360 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 319 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 350
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 73/100 (73%), Gaps = 10/100 (10%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA--SSTPTLPTLKHDMMYHHGMNGTHGGP---NGR 63
+F GLNDGLLSRAEALAAVDIGKH + P LP LKHDM+YHHG+ GGP N R
Sbjct: 57 IFGGLNDGLLSRAEALAAVDIGKHQSGPQPGPPLPQLKHDMVYHHGV----GGPPPHNAR 112
Query: 64 PHQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLH 102
P QM HHGM+G++MLD + SSSMTTL PM + P HQLH
Sbjct: 113 PPQMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLH 152
>gi|357622600|gb|EHJ74026.1| inhibitory pou [Danaus plexippus]
Length = 306
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 203/248 (81%), Positives = 209/248 (84%), Gaps = 13/248 (5%)
Query: 145 QMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHH 203
QM HHGM+GL+MLD + SSSMTTL PM + P HQLH YG +MN +M HHH
Sbjct: 71 QMGHHGMEGLDMLDPLTSSSMTTLAPMGEAAPPHHQLHG---YG-AMNHVMNHHHHTGGL 126
Query: 204 SGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALA 263
A PA H P HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALA
Sbjct: 127 GHAPPAHLGH--------PAAALHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALA 178
Query: 264 NLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLP 323
NLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLP
Sbjct: 179 NLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLP 238
Query: 324 AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 383
AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK
Sbjct: 239 AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 298
Query: 384 RMKFAAQH 391
RMKFAAQH
Sbjct: 299 RMKFAAQH 306
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 75/100 (75%), Gaps = 10/100 (10%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA--SSTPTLPTLKHDMMYHHGMNGTHGGP---NGR 63
+FSGLNDGLLSRAEALAAVDIGKH + P LP LKHDM+YHHG+ GGP N R
Sbjct: 13 IFSGLNDGLLSRAEALAAVDIGKHQSGPQPGPPLPQLKHDMVYHHGV----GGPPPHNAR 68
Query: 64 PHQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLH 102
PHQM HHGM+GL+MLD + SSSMTTL PM + P HQLH
Sbjct: 69 PHQMGHHGMEGLDMLDPLTSSSMTTLAPMGEAAPPHHQLH 108
>gi|170058323|ref|XP_001864872.1| inhibitory pou [Culex quinquefasciatus]
gi|167877452|gb|EDS40835.1| inhibitory pou [Culex quinquefasciatus]
Length = 340
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/257 (80%), Positives = 211/257 (82%), Gaps = 21/257 (8%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MDG++MLD S SMTTLTPMS+ T + HQLH S SMN MM H
Sbjct: 96 PLQMHHTMDGIDMLDP-SGSMTTLTPMSEAPITSSHHQLHGSYH---SMNHMMG-----H 146
Query: 202 HHSGALPASHHHG--ATHHPVMPP-----GLQHPDTDTDPRELEAFAERFKQRRIKLGVT 254
HHSG L G +HHP M GL HPDTDTDPRELEAFAERFKQRRIKLGVT
Sbjct: 147 HHSGPLGGHTPDGFLGSHHPAMAVAVAAAGL-HPDTDTDPRELEAFAERFKQRRIKLGVT 205
Query: 255 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 314
QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR
Sbjct: 206 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 265
Query: 315 DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 374
DPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW
Sbjct: 266 DPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 323
Query: 375 FCNQRQKQKRMKFAAQH 391
FCNQRQKQKRMKFAAQH
Sbjct: 324 FCNQRQKQKRMKFAAQH 340
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 83/130 (63%), Gaps = 18/130 (13%)
Query: 3 VRRYALLFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPT--LKHDMMYHHGMNGTHGGP 60
R +FSGLNDG+LSRAEALAAVDIGKH S T T LKHD+MYHH M G P
Sbjct: 37 AEREGDIFSGLNDGILSRAEALAAVDIGKHQGSHAHTQMTQQLKHDVMYHHSM----GAP 92
Query: 61 NGRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGH 118
RP QM HH MDG++MLD S SMTTLTPMS+ T + HQLH S SMN MM
Sbjct: 93 PQRPLQM-HHTMDGIDMLDP-SGSMTTLTPMSEAPITSSHHQLHGSYH---SMNHMMG-- 145
Query: 119 HHHHHHSGAL 128
HHHSG L
Sbjct: 146 ---HHHSGPL 152
>gi|194763449|ref|XP_001963845.1| GF21043 [Drosophila ananassae]
gi|190618770|gb|EDV34294.1| GF21043 [Drosophila ananassae]
Length = 330
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 195/244 (79%), Positives = 203/244 (83%), Gaps = 11/244 (4%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH SG
Sbjct: 74 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-HHHPGTLSG 128
Query: 206 ALPASHHHGATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H H A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA
Sbjct: 129 HTAGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 188
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV
Sbjct: 189 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 248
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 249 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 308
Query: 382 QKRM 385
QKR+
Sbjct: 309 QKRI 312
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 19/83 (22%)
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHH------- 119
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HH
Sbjct: 74 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMSHHHPGTLSGH 129
Query: 120 --HHHHHSGALPASHHHVATPSL 140
HH HS A HH V T ++
Sbjct: 130 TAGHHGHS----AVHHPVITAAV 148
>gi|349584657|dbj|BAL03081.1| abnormal chemosensory jump 6, isoform E [Bombyx mori]
Length = 289
Score = 369 bits (948), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/247 (80%), Positives = 207/247 (83%), Gaps = 13/247 (5%)
Query: 146 MSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS 204
M HHGM+G++MLD + SSSMTTL PM + P HQLH YG +MN +M HHH
Sbjct: 55 MGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLHG---YG-AMNHVMNHHHHPGGLG 110
Query: 205 GALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALAN 264
A PA H P HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALAN
Sbjct: 111 HAPPAHLGH--------PAAALHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALAN 162
Query: 265 LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA 324
LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA
Sbjct: 163 LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA 222
Query: 325 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDLKKNVVRVWFCNQRQKQKR
Sbjct: 223 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDLKKNVVRVWFCNQRQKQKR 282
Query: 385 MKFAAQH 391
MKFAAQH
Sbjct: 283 MKFAAQH 289
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 65 HQMSHHGMDGLEMLDSI-SSSMTTLTPMSDPTPNPHQLH 102
H M HHGM+G++MLD + SSSMTTL PM + P HQLH
Sbjct: 53 HNMGHHGMEGIDMLDPLTSSSMTTLAPMGEGAPPHHQLH 91
>gi|195432290|ref|XP_002064156.1| GK20016 [Drosophila willistoni]
gi|194160241|gb|EDW75142.1| GK20016 [Drosophila willistoni]
Length = 264
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 200/257 (77%), Positives = 210/257 (81%), Gaps = 13/257 (5%)
Query: 140 LLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGH 197
+ LF QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 2 ICLF-QM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-H 54
Query: 198 HHHHHHSGALPASHHHGATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH SG H H A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 55 HHPGTLSGHTAGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 114
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 115 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 174
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 175 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 234
Query: 374 WFCNQRQKQKRMKFAAQ 390
WFCNQRQKQKR+ + Q
Sbjct: 235 WFCNQRQKQKRIVSSVQ 251
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 43/83 (51%), Gaps = 19/83 (22%)
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHH------- 119
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HH
Sbjct: 8 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMSHHHPGTLSGH 63
Query: 120 --HHHHHSGALPASHHHVATPSL 140
HH HS A HH V T ++
Sbjct: 64 TAGHHGHS----AVHHPVITAAV 82
>gi|195397527|ref|XP_002057380.1| GJ16375 [Drosophila virilis]
gi|194147147|gb|EDW62866.1| GJ16375 [Drosophila virilis]
Length = 385
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 196/249 (78%), Positives = 204/249 (81%), Gaps = 11/249 (4%)
Query: 143 FPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHH 200
F HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH
Sbjct: 124 FLSQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-HHHP 178
Query: 201 HHHSGALPASHHHGATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQA 256
SG H H A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGVTQA
Sbjct: 179 GTLSGHTAGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQA 238
Query: 257 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 316
DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP
Sbjct: 239 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 298
Query: 317 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFC 376
DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFC
Sbjct: 299 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFC 358
Query: 377 NQRQKQKRM 385
NQRQKQKR+
Sbjct: 359 NQRQKQKRI 367
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 89/160 (55%), Gaps = 34/160 (21%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH T
Sbjct: 57 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HTM 111
Query: 58 GGPNGRPHQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGP 109
GP RP Q + HH MD L+MLD + SMTTL P+S+ TP LH S
Sbjct: 112 SGPPQRPLQKNGFLSQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH--- 167
Query: 110 SMNSMMTGHH---------HHHHHSGALPASHHHVATPSL 140
SMN MM+ HH HH HS A HH V T ++
Sbjct: 168 SMNHMMSHHHPGTLSGHTAGHHGHS----AVHHPVITAAV 203
>gi|195060344|ref|XP_001995785.1| GH17948 [Drosophila grimshawi]
gi|193896571|gb|EDV95437.1| GH17948 [Drosophila grimshawi]
Length = 320
Score = 368 bits (945), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/269 (74%), Positives = 212/269 (78%), Gaps = 11/269 (4%)
Query: 123 HHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQL 180
H S + AS + S L + HH MD L+MLD + SMTTL P+S+ TP L
Sbjct: 39 HRSSTVTASQTKCCSLSCSLSARRMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHL 97
Query: 181 HSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQ----HPDTDTDPRE 236
H S SMN MM+ HHH SG H H A HHPV+ + HPDTDTDPRE
Sbjct: 98 HGSYH---SMNHMMS-HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRE 153
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP
Sbjct: 154 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 213
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK
Sbjct: 214 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 273
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
IAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 274 IAAIAEKLDLKKNVVRVWFCNQRQKQKRI 302
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 126
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH G
Sbjct: 64 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----HHHPG 114
Query: 127 AL 128
L
Sbjct: 115 TL 116
>gi|17864538|ref|NP_524876.1| abnormal chemosensory jump 6, isoform A [Drosophila melanogaster]
gi|194894619|ref|XP_001978096.1| GG19406 [Drosophila erecta]
gi|97536463|sp|P24350.3|IPOU_DROME RecName: Full=Inhibitory POU protein; Short=I-POU; AltName:
Full=Abnormal chemosensory jump 6 protein
gi|3599515|gb|AAC35369.1| POU domain transcription factor [Drosophila melanogaster]
gi|22833164|gb|AAF48447.2| abnormal chemosensory jump 6, isoform A [Drosophila melanogaster]
gi|190649745|gb|EDV47023.1| GG19406 [Drosophila erecta]
Length = 396
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 200/275 (72%), Positives = 211/275 (76%), Gaps = 23/275 (8%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 117 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 171
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 172 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 223
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 224 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 283
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 284 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 343
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 344 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 378
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 81/139 (58%), Gaps = 26/139 (18%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH +
Sbjct: 68 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSM 122
Query: 58 GGPNGRPHQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGP 109
GP RP Q + HH MD L+MLD + SMTTL P+S+ TP LH S
Sbjct: 123 SGPPQRPLQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH--- 178
Query: 110 SMNSMMTGHHHHHHHSGAL 128
SMN MM+ HHH G L
Sbjct: 179 SMNHMMS-----HHHPGTL 192
>gi|386764465|ref|NP_001245684.1| abnormal chemosensory jump 6, isoform I [Drosophila melanogaster]
gi|383293410|gb|AFH07398.1| abnormal chemosensory jump 6, isoform I [Drosophila melanogaster]
Length = 366
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 200/275 (72%), Positives = 211/275 (76%), Gaps = 23/275 (8%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 87 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 141
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 142 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 193
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 194 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 253
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 254 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 313
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 314 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 348
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 78/132 (59%), Gaps = 26/132 (19%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 45 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 99
Query: 65 HQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMT 116
Q + HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+
Sbjct: 100 LQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS 155
Query: 117 GHHHHHHHSGAL 128
HHH G L
Sbjct: 156 -----HHHPGTL 162
>gi|386764469|ref|NP_001245686.1| abnormal chemosensory jump 6, isoform K [Drosophila melanogaster]
gi|383293412|gb|AFH07400.1| abnormal chemosensory jump 6, isoform K [Drosophila melanogaster]
Length = 370
Score = 363 bits (932), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 194/252 (76%), Positives = 202/252 (80%), Gaps = 19/252 (7%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 110 PLQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 160
Query: 202 HHSGALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH G L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 161 HHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 220
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 221 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 280
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 281 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 340
Query: 374 WFCNQRQKQKRM 385
WFCNQRQKQKR+
Sbjct: 341 WFCNQRQKQKRI 352
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 78/126 (61%), Gaps = 21/126 (16%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 56 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 110
Query: 65 HQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 122
QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 111 LQM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 160
Query: 123 HHSGAL 128
HH G L
Sbjct: 161 HHPGTL 166
>gi|386764475|ref|NP_001245689.1| abnormal chemosensory jump 6, isoform N [Drosophila melanogaster]
gi|383293415|gb|AFH07403.1| abnormal chemosensory jump 6, isoform N [Drosophila melanogaster]
Length = 378
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/252 (76%), Positives = 202/252 (80%), Gaps = 19/252 (7%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 118 PLQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 168
Query: 202 HHSGALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH G L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 169 HHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 228
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 229 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 288
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 289 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 348
Query: 374 WFCNQRQKQKRM 385
WFCNQRQKQKR+
Sbjct: 349 WFCNQRQKQKRI 360
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 21/133 (15%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH +
Sbjct: 57 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSM 111
Query: 58 GGPNGRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMM 115
GP RP QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM
Sbjct: 112 SGPPQRPLQM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMM 166
Query: 116 TGHHHHHHHSGAL 128
+ HHH G L
Sbjct: 167 S-----HHHPGTL 174
>gi|386764467|ref|NP_001245685.1| abnormal chemosensory jump 6, isoform J [Drosophila melanogaster]
gi|383293411|gb|AFH07399.1| abnormal chemosensory jump 6, isoform J [Drosophila melanogaster]
Length = 359
Score = 363 bits (931), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 194/252 (76%), Positives = 202/252 (80%), Gaps = 19/252 (7%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 99 PLQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 149
Query: 202 HHSGALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH G L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 150 HHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 209
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 210 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 269
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 270 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 329
Query: 374 WFCNQRQKQKRM 385
WFCNQRQKQKR+
Sbjct: 330 WFCNQRQKQKRI 341
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 78/126 (61%), Gaps = 21/126 (16%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 45 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 99
Query: 65 HQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 122
QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 100 LQM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 149
Query: 123 HHSGAL 128
HH G L
Sbjct: 150 HHPGTL 155
>gi|195356216|ref|XP_002044576.1| GM25017 [Drosophila sechellia]
gi|194132207|gb|EDW53829.1| GM25017 [Drosophila sechellia]
Length = 258
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/244 (79%), Positives = 203/244 (83%), Gaps = 11/244 (4%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH SG
Sbjct: 2 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-HHHPGTLSG 56
Query: 206 ALPASHHHGATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H H A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA
Sbjct: 57 HTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 116
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV
Sbjct: 117 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 176
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 177 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 236
Query: 382 QKRM 385
QKR+
Sbjct: 237 QKRI 240
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 126
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH G
Sbjct: 2 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----HHHPG 52
Query: 127 AL 128
L
Sbjct: 53 TL 54
>gi|195566864|ref|XP_002106995.1| GD15807 [Drosophila simulans]
gi|194204392|gb|EDX17968.1| GD15807 [Drosophila simulans]
Length = 266
Score = 362 bits (930), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 195/244 (79%), Positives = 203/244 (83%), Gaps = 11/244 (4%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH SG
Sbjct: 10 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-HHHPGTLSG 64
Query: 206 ALPASHHHGATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H H A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA
Sbjct: 65 HTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 124
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV
Sbjct: 125 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 184
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 185 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 244
Query: 382 QKRM 385
QKR+
Sbjct: 245 QKRI 248
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 40/70 (57%), Gaps = 12/70 (17%)
Query: 61 NGRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGH 118
+GR +M HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+
Sbjct: 3 DGRWAEM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-- 55
Query: 119 HHHHHHSGAL 128
HHH G L
Sbjct: 56 ---HHHPGTL 62
>gi|328713589|ref|XP_001950003.2| PREDICTED: inhibitory POU protein-like [Acyrthosiphon pisum]
Length = 424
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 201/260 (77%), Positives = 211/260 (81%), Gaps = 16/260 (6%)
Query: 148 HHGMDGLEMLDSISSS-MTTLTPMSDPT------PNPH---------QLHSSSMYGPSMN 191
H GM+GL++L+ ISSS MTTLTPMSD + P + HS S GP+ +
Sbjct: 165 HPGMEGLDLLEPISSSTMTTLTPMSDGSGHGPLHPGVYGAGMMSGHHHHHSHSGAGPNGH 224
Query: 192 SMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKL 251
HHHHHH + A A+ GLQHPDTDTDPRELEAFAERFKQRRIKL
Sbjct: 225 PHHHHHHHHHHAAAAAAAAAAAAGMIGAGGGAGLQHPDTDTDPRELEAFAERFKQRRIKL 284
Query: 252 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 311
GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN
Sbjct: 285 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 344
Query: 312 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV
Sbjct: 345 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 404
Query: 372 RVWFCNQRQKQKRMKFAAQH 391
RVWFCNQRQKQKRMKFAAQH
Sbjct: 405 RVWFCNQRQKQKRMKFAAQH 424
>gi|198470029|ref|XP_002134478.1| GA26624 [Drosophila pseudoobscura pseudoobscura]
gi|198147148|gb|EDY73105.1| GA26624 [Drosophila pseudoobscura pseudoobscura]
Length = 294
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 190/248 (76%), Positives = 198/248 (79%), Gaps = 19/248 (7%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
HH MD L+MLD + MTTL P+S+ TP LH S SMN MM+ HHH G
Sbjct: 38 HHSMDQLDMLDP-TGQMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----HHHPG 88
Query: 206 ALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQAD 257
L A HHPV+ + HPDTDTDPRELEAFAERFKQRRI GVTQAD
Sbjct: 89 TLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRINFGVTQAD 148
Query: 258 VGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD 317
VGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD
Sbjct: 149 VGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD 208
Query: 318 APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN 377
APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN
Sbjct: 209 APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN 268
Query: 378 QRQKQKRM 385
QRQKQKR+
Sbjct: 269 QRQKQKRI 276
>gi|312377308|gb|EFR24168.1| hypothetical protein AND_11422 [Anopheles darlingi]
Length = 496
Score = 357 bits (917), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 203/300 (67%), Positives = 217/300 (72%), Gaps = 35/300 (11%)
Query: 122 HHHSGALPASHHHVATPSLLLFPQMS-HHGMDGLEMLDSISSSMTTLTPMSDPTP---NP 177
+ SG L HH + F + HH MDG++MLD S SMTTLTPM++ TP +
Sbjct: 202 NRRSGGLKPGHHRSEVMKMFRFVSLQMHHTMDGIDMLDP-SGSMTTLTPMAE-TPISSSH 259
Query: 178 HQLHSS---SMYGPSMNSMMTGHHH-------HHHHSGALPASHHHGATHHPVMPPGLQ- 226
HQLH S + +S G+H H GA S AT++ + G
Sbjct: 260 HQLHGSYHMNHMMSHHHSSHLGNHTPGTDAGTDREHPGA-AGSCVSNATYNAIFADGFLG 318
Query: 227 ---------------HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG 271
HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG
Sbjct: 319 AHHPAMAAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG 378
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK KR
Sbjct: 379 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK--KR 436
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 437 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 496
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 13 LNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMNGTHGGPNGRPHQ 66
++DG+LSRAEALAAVDIGKH + LKHD+MYHHGM G P RP Q
Sbjct: 1 MSDGILSRAEALAAVDIGKHQNNHPQMATQLKHDVMYHHGM----GAPPQRPLQ 50
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 29/39 (74%), Gaps = 5/39 (12%)
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDPTP---NPHQLHSS 104
HH MDG++MLD S SMTTLTPM++ TP + HQLH S
Sbjct: 229 HHTMDGIDMLDP-SGSMTTLTPMAE-TPISSSHHQLHGS 265
>gi|62473727|ref|NP_001014743.1| abnormal chemosensory jump 6, isoform D [Drosophila melanogaster]
gi|61677902|gb|AAX52498.1| abnormal chemosensory jump 6, isoform D [Drosophila melanogaster]
Length = 394
Score = 357 bits (915), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 209/275 (76%), Gaps = 25/275 (9%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 117 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 171
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 172 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 223
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 224 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 283
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQP
Sbjct: 284 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQP 341
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 342 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 376
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 81/139 (58%), Gaps = 26/139 (18%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH +
Sbjct: 68 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSM 122
Query: 58 GGPNGRPHQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGP 109
GP RP Q + HH MD L+MLD + SMTTL P+S+ TP LH S
Sbjct: 123 SGPPQRPLQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH--- 178
Query: 110 SMNSMMTGHHHHHHHSGAL 128
SMN MM+ HHH G L
Sbjct: 179 SMNHMMS-----HHHPGTL 192
>gi|386764473|ref|NP_001245688.1| abnormal chemosensory jump 6, isoform M [Drosophila melanogaster]
gi|383293414|gb|AFH07402.1| abnormal chemosensory jump 6, isoform M [Drosophila melanogaster]
Length = 383
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 209/275 (76%), Gaps = 25/275 (9%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 106 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 160
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 161 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 212
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 213 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 272
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQP
Sbjct: 273 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQP 330
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 331 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 365
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 81/139 (58%), Gaps = 26/139 (18%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH +
Sbjct: 57 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSM 111
Query: 58 GGPNGRPHQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGP 109
GP RP Q + HH MD L+MLD + SMTTL P+S+ TP LH S
Sbjct: 112 SGPPQRPLQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH--- 167
Query: 110 SMNSMMTGHHHHHHHSGAL 128
SMN MM+ HHH G L
Sbjct: 168 SMNHMMS-----HHHPGTL 181
>gi|24642153|ref|NP_727845.1| abnormal chemosensory jump 6, isoform E [Drosophila melanogaster]
gi|22833163|gb|AAN09663.1| abnormal chemosensory jump 6, isoform E [Drosophila melanogaster]
Length = 375
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 209/275 (76%), Gaps = 25/275 (9%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 98 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 152
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 153 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 204
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 205 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 264
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQP
Sbjct: 265 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQP 322
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 323 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 357
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 78/132 (59%), Gaps = 26/132 (19%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 56 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 110
Query: 65 HQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMT 116
Q + HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+
Sbjct: 111 LQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS 166
Query: 117 GHHHHHHHSGAL 128
HHH G L
Sbjct: 167 -----HHHPGTL 173
>gi|212287996|gb|ABI34196.3| RT01016p [Drosophila melanogaster]
gi|212288002|gb|ABI34229.3| RT01116p [Drosophila melanogaster]
Length = 369
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 209/275 (76%), Gaps = 25/275 (9%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 92 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 146
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 147 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 198
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 199 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 258
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQP
Sbjct: 259 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQP 316
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 317 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 351
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 78/132 (59%), Gaps = 26/132 (19%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 50 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 104
Query: 65 HQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMT 116
Q + HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+
Sbjct: 105 LQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS 160
Query: 117 GHHHHHHHSGAL 128
HHH G L
Sbjct: 161 -----HHHPGTL 167
>gi|221329936|ref|NP_001138198.1| abnormal chemosensory jump 6, isoform F [Drosophila melanogaster]
gi|220901779|gb|ACL82930.1| abnormal chemosensory jump 6, isoform F [Drosophila melanogaster]
Length = 364
Score = 355 bits (912), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 209/275 (76%), Gaps = 25/275 (9%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 87 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 141
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 142 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 193
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 194 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 253
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQP
Sbjct: 254 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQP 311
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 312 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 346
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/132 (48%), Positives = 78/132 (59%), Gaps = 26/132 (19%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 45 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 99
Query: 65 HQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMT 116
Q + HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+
Sbjct: 100 LQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS 155
Query: 117 GHHHHHHHSGAL 128
HHH G L
Sbjct: 156 -----HHHPGTL 162
>gi|307210801|gb|EFN87183.1| Inhibitory POU protein [Harpegnathos saltator]
Length = 283
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 200/258 (77%), Positives = 209/258 (81%), Gaps = 14/258 (5%)
Query: 145 QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSS----SMYGPSMNSMMTGHHHH 200
QM H GM+ L+MLD ++SMTTLTPMS+ T H+ S+YG MN MM+ HHHH
Sbjct: 29 QMGHPGMESLDMLDP-ANSMTTLTPMSESTGGGPGHHTGIHGPSVYG-GMNGMMSHHHHH 86
Query: 201 HH-HSGA------LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGV 253
+ SG A GL HPD DTDPRELEAFAERFKQRRIKLGV
Sbjct: 87 GNLGSGGGSVPHPAHHHPAMAAAAPAAAAAGL-HPDADTDPRELEAFAERFKQRRIKLGV 145
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 146 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 205
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 206 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 265
Query: 374 WFCNQRQKQKRMKFAAQH 391
WFCNQRQKQKRMKFAAQH
Sbjct: 266 WFCNQRQKQKRMKFAAQH 283
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/89 (48%), Positives = 55/89 (61%), Gaps = 5/89 (5%)
Query: 43 LKHD--MMYHHGMNGTHGGPNGRPH-QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPH 99
LKHD +YHHG + PN RPH QM H GM+ L+MLD ++SMTTLTPMS+ +
Sbjct: 3 LKHDPVSVYHHGPHMPTPHPNNRPHHQMGHPGMESLDMLDP-ANSMTTLTPMSE-STGGG 60
Query: 100 QLHSSSMYGPSMNSMMTGHHHHHHHSGAL 128
H + ++GPS+ M G HHHH G L
Sbjct: 61 PGHHTGIHGPSVYGGMNGMMSHHHHHGNL 89
>gi|322789765|gb|EFZ14931.1| hypothetical protein SINV_13279 [Solenopsis invicta]
Length = 252
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 195/254 (76%), Positives = 203/254 (79%), Gaps = 12/254 (4%)
Query: 145 QMSHHGMDGLEMLDSISSSMTTLTPMSDPT---PNPHQ-LHSSSMYGPSMNSMMTGHHHH 200
QMSH GM+ L+MLD ++SMTTLTPMS+ T P H +H S+YG M HHH
Sbjct: 1 QMSHPGMESLDMLDP-ANSMTTLTPMSESTGGGPGHHAGIHGPSVYGGMNGMMSHHHHHS 59
Query: 201 HHHSGALPASHHHGATHHPVMPP------GLQHPDTDTDPRELEAFAERFKQRRIKLGVT 254
+ G H GL HPD DTDPRELEAFAERFKQRRIKLGVT
Sbjct: 60 NLGGGGGSVPHPAHHHPAMAAAAAAAAAAGL-HPDADTDPRELEAFAERFKQRRIKLGVT 118
Query: 255 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 314
QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR
Sbjct: 119 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 178
Query: 315 DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 374
DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW
Sbjct: 179 DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 238
Query: 375 FCNQRQKQKRMKFA 388
FCNQRQKQKRMKFA
Sbjct: 239 FCNQRQKQKRMKFA 252
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 5/47 (10%)
Query: 66 QMSHHGMDGLEMLDSISSSMTTLTPMSDPT---PNPHQ-LHSSSMYG 108
QMSH GM+ L+MLD ++SMTTLTPMS+ T P H +H S+YG
Sbjct: 1 QMSHPGMESLDMLDP-ANSMTTLTPMSESTGGGPGHHAGIHGPSVYG 46
>gi|386764461|ref|NP_001245682.1| abnormal chemosensory jump 6, isoform G [Drosophila melanogaster]
gi|383293408|gb|AFH07396.1| abnormal chemosensory jump 6, isoform G [Drosophila melanogaster]
Length = 387
Score = 354 bits (909), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 192/252 (76%), Positives = 200/252 (79%), Gaps = 21/252 (8%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 129 PLQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 179
Query: 202 HHSGALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH G L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 180 HHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 239
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 240 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 299
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 300 RDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 357
Query: 374 WFCNQRQKQKRM 385
WFCNQRQKQKR+
Sbjct: 358 WFCNQRQKQKRI 369
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 21/133 (15%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH +
Sbjct: 68 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSM 122
Query: 58 GGPNGRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMM 115
GP RP QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM
Sbjct: 123 SGPPQRPLQM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMM 177
Query: 116 TGHHHHHHHSGAL 128
+ HHH G L
Sbjct: 178 S-----HHHPGTL 185
>gi|386764471|ref|NP_001245687.1| abnormal chemosensory jump 6, isoform L [Drosophila melanogaster]
gi|383293413|gb|AFH07401.1| abnormal chemosensory jump 6, isoform L [Drosophila melanogaster]
Length = 376
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 192/252 (76%), Positives = 200/252 (79%), Gaps = 21/252 (8%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 118 PLQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 168
Query: 202 HHSGALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH G L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 169 HHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 228
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 229 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 288
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 289 RDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 346
Query: 374 WFCNQRQKQKRM 385
WFCNQRQKQKR+
Sbjct: 347 WFCNQRQKQKRI 358
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 81/133 (60%), Gaps = 21/133 (15%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH +
Sbjct: 57 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSM 111
Query: 58 GGPNGRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMM 115
GP RP QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM
Sbjct: 112 SGPPQRPLQM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMM 166
Query: 116 TGHHHHHHHSGAL 128
+ HHH G L
Sbjct: 167 S-----HHHPGTL 174
>gi|62473739|ref|NP_001014744.1| abnormal chemosensory jump 6, isoform C [Drosophila melanogaster]
gi|61677901|gb|AAX52497.1| abnormal chemosensory jump 6, isoform C [Drosophila melanogaster]
Length = 368
Score = 354 bits (908), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 192/252 (76%), Positives = 200/252 (79%), Gaps = 21/252 (8%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 110 PLQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 160
Query: 202 HHSGALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH G L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 161 HHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 220
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 221 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 280
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 281 RDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 338
Query: 374 WFCNQRQKQKRM 385
WFCNQRQKQKR+
Sbjct: 339 WFCNQRQKQKRI 350
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 78/126 (61%), Gaps = 21/126 (16%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 56 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 110
Query: 65 HQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 122
QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 111 LQM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 160
Query: 123 HHSGAL 128
HH G L
Sbjct: 161 HHPGTL 166
>gi|386764463|ref|NP_001245683.1| abnormal chemosensory jump 6, isoform H [Drosophila melanogaster]
gi|383293409|gb|AFH07397.1| abnormal chemosensory jump 6, isoform H [Drosophila melanogaster]
Length = 357
Score = 353 bits (907), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 192/252 (76%), Positives = 200/252 (79%), Gaps = 21/252 (8%)
Query: 144 PQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 99 PLQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 149
Query: 202 HHSGALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGV 253
HH G L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGV
Sbjct: 150 HHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGV 209
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 210 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 269
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 270 RDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 327
Query: 374 WFCNQRQKQKRM 385
WFCNQRQKQKR+
Sbjct: 328 WFCNQRQKQKRI 339
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 78/126 (61%), Gaps = 21/126 (16%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTHGGPNGRP 64
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH + GP RP
Sbjct: 45 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSMSGPPQRP 99
Query: 65 HQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHH 122
QM HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ H
Sbjct: 100 LQM-HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----H 149
Query: 123 HHSGAL 128
HH G L
Sbjct: 150 HHPGTL 155
>gi|345483076|ref|XP_001605968.2| PREDICTED: inhibitory POU protein-like [Nasonia vitripennis]
Length = 368
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 205/288 (71%), Positives = 218/288 (75%), Gaps = 29/288 (10%)
Query: 122 HHHSGALPASHHHVATPSLLLFP--QMSHHGMDGLEMLDSISSSMTTLTPMSDPTP---- 175
+HH +P+ HH+ P QMSH GM+ L+MLD ++SMTTLTPMS+
Sbjct: 92 YHHGAHMPSPHHNNR-------PHHQMSHPGMESLDMLDP-ANSMTTLTPMSEGAAGGGG 143
Query: 176 -----NPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPAS-------HHHGATHHPVMPP 223
NP H ++GPS+ M G HHHH + S A
Sbjct: 144 GGGANNPG--HHGGIHGPSVYGGMNGMMGHHHHHSQIGGSVPHPHHHPAMAAAAAAAAAA 201
Query: 224 GLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES 283
GL HPD DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES
Sbjct: 202 GL-HPDADTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES 260
Query: 284 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE
Sbjct: 261 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 320
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 321 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 368
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 63/91 (69%), Gaps = 8/91 (8%)
Query: 6 YALLFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHD--MMYHHGMNGTHGGPNGR 63
+ L SGL DGLLSRAEALAA D+GKH+ TP LKHD +YHHG + N R
Sbjct: 51 FGGLNSGLQDGLLSRAEALAA-DLGKHNG-GTPM--PLKHDPVSVYHHGAHMPSPHHNNR 106
Query: 64 P-HQMSHHGMDGLEMLDSISSSMTTLTPMSD 93
P HQMSH GM+ L+MLD ++SMTTLTPMS+
Sbjct: 107 PHHQMSHPGMESLDMLDP-ANSMTTLTPMSE 136
>gi|383850098|ref|XP_003700654.1| PREDICTED: inhibitory POU protein-like [Megachile rotundata]
Length = 364
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 206/286 (72%), Positives = 217/286 (75%), Gaps = 29/286 (10%)
Query: 122 HHHSGALPASH-----HHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
+HH +PA H HH QMSH GM+ L+MLD ++SMTTLTPMS+ T
Sbjct: 92 YHHGAHMPAPHPNNRPHH----------QMSHPGMESLDMLDP-ANSMTTLTPMSENTGG 140
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHH-----------HGATHHPVMPPGL 225
H + ++GPS+ M G HHHH G L A GL
Sbjct: 141 -GPGHHAGIHGPSVYGGMNGMMGHHHHHGNLGGGGGSVPHPAHHHPAMAAXAAAAAAAGL 199
Query: 226 QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
HPD DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT
Sbjct: 200 -HPDADTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 258
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY
Sbjct: 259 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 318
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 319 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 364
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 9/109 (8%)
Query: 6 YALLFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHD--MMYHHGMNGTHGGPNGR 63
+ L SGL DGLLSRAEALAA D+GKH+A TP LKHD +YHHG + PN R
Sbjct: 51 FGGLNSGLQDGLLSRAEALAA-DLGKHNA-GTPM--PLKHDPVSVYHHGAHMPAPHPNNR 106
Query: 64 P-HQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSM 111
P HQMSH GM+ L+MLD ++SMTTLTPMS+ T H + ++GPS+
Sbjct: 107 PHHQMSHPGMESLDMLDP-ANSMTTLTPMSENT-GGGPGHHAGIHGPSV 153
>gi|340722501|ref|XP_003399643.1| PREDICTED: inhibitory POU protein-like [Bombus terrestris]
gi|350418475|ref|XP_003491869.1| PREDICTED: inhibitory POU protein-like [Bombus impatiens]
Length = 364
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 199/258 (77%), Positives = 208/258 (80%), Gaps = 14/258 (5%)
Query: 145 QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS 204
QMSH GM+ L+MLD ++SMTTLTPMS+ T H + ++GPS+ M G HHHH
Sbjct: 110 QMSHPGMESLDMLDP-ANSMTTLTPMSENTGG-GPGHHAGIHGPSVYGGMNGMMGHHHHH 167
Query: 205 GALPASHH-----------HGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGV 253
G L A GL HPD DTDPRELEAFAERFKQRRIKLGV
Sbjct: 168 GNLGGGGGSVPHPAHHHPAMAAAAAAAAAAGL-HPDADTDPRELEAFAERFKQRRIKLGV 226
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR
Sbjct: 227 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 286
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV
Sbjct: 287 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 346
Query: 374 WFCNQRQKQKRMKFAAQH 391
WFCNQRQKQKRMKFAAQH
Sbjct: 347 WFCNQRQKQKRMKFAAQH 364
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 9/109 (8%)
Query: 6 YALLFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHD--MMYHHGMNGTHGGPNGR 63
+ L SGL DGLLSRAEALAA D+GKH+A TP LKHD +YHHG + PN R
Sbjct: 51 FGGLNSGLQDGLLSRAEALAA-DLGKHNAG-TPM--PLKHDPVSVYHHGTHMPTPHPNNR 106
Query: 64 PH-QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSM 111
PH QMSH GM+ L+MLD ++SMTTLTPMS+ T H + ++GPS+
Sbjct: 107 PHHQMSHPGMESLDMLDP-ANSMTTLTPMSENT-GGGPGHHAGIHGPSV 153
>gi|380012129|ref|XP_003690140.1| PREDICTED: inhibitory POU protein-like [Apis florea]
Length = 351
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/165 (99%), Positives = 164/165 (99%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HPD DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL
Sbjct: 187 HPDADTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 246
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF
Sbjct: 247 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 306
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 307 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 351
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/91 (61%), Positives = 67/91 (73%), Gaps = 8/91 (8%)
Query: 6 YALLFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHD--MMYHHGMNGTHGGPNGR 63
+ L SGL DGLLSRAEALAA D+GKH+A TP +P LKHD +YHHG + PN R
Sbjct: 38 FGGLNSGLQDGLLSRAEALAA-DLGKHNAG-TP-MP-LKHDPVSVYHHGAHMPTPHPNNR 93
Query: 64 PH-QMSHHGMDGLEMLDSISSSMTTLTPMSD 93
PH QMSH GM+ L+MLD ++SMTTLTPMS+
Sbjct: 94 PHHQMSHPGMESLDMLDP-ANSMTTLTPMSE 123
>gi|347967307|ref|XP_308015.5| AGAP002172-PA [Anopheles gambiae str. PEST]
gi|333466356|gb|EAA03783.6| AGAP002172-PA [Anopheles gambiae str. PEST]
Length = 397
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 199/306 (65%), Positives = 212/306 (69%), Gaps = 44/306 (14%)
Query: 109 PSMNSMMTGHHHHHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLT 168
P M + + +HH GA P P HH MDG++MLD S SMTTLT
Sbjct: 92 PQMATQLKHDVMYHHGMGAPPQR------------PLQMHHTMDGIDMLDP-SGSMTTLT 138
Query: 169 PMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPAS---HHHGA-------- 215
PM++ T + HQLH S M S H +H G+ A H GA
Sbjct: 139 PMAETPITSSHHQLHGSYHSMNHMMSHHHSSHLGNHTPGSTDAGADREHPGAAGSCVSNA 198
Query: 216 THHPVMPPGLQ----------------HPDTDTDPRELEAFAERFKQRRIKLGVTQADVG 259
T++ + G HPDTDTDPRELEAFAERFKQRRIKLGVTQADVG
Sbjct: 199 TYNAIFADGFLGAHHPAMAAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVG 258
Query: 260 KALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP 319
KALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP
Sbjct: 259 KALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP 318
Query: 320 SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQR 379
SVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQR
Sbjct: 319 SVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQR 376
Query: 380 QKQKRM 385
QKQKRM
Sbjct: 377 QKQKRM 382
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 70/98 (71%), Gaps = 8/98 (8%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMNGTHGGPNGRPHQMS 68
+FSGLNDG+LSRAEALAAVDIGKH + LKHD+MYHHGM G P RP QM
Sbjct: 64 IFSGLNDGILSRAEALAAVDIGKHQNNHPQMATQLKHDVMYHHGM----GAPPQRPLQM- 118
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSS 104
HH MDG++MLD S SMTTLTPM++ T + HQLH S
Sbjct: 119 HHTMDGIDMLDP-SGSMTTLTPMAETPITSSHHQLHGS 155
>gi|66526269|ref|XP_394134.2| PREDICTED: inhibitory POU protein [Apis mellifera]
Length = 364
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 164/165 (99%), Positives = 164/165 (99%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HPD DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL
Sbjct: 200 HPDADTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 259
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF
Sbjct: 260 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 319
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 320 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 364
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 65/91 (71%), Gaps = 8/91 (8%)
Query: 6 YALLFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHD--MMYHHGMNGTHGGPNGR 63
+ L SGL DGLLSRAEALAA D+GKH+A TP LKHD +YHHG + PN R
Sbjct: 51 FGGLNSGLQDGLLSRAEALAA-DLGKHNAG-TPM--PLKHDPVSVYHHGAHMPTPHPNNR 106
Query: 64 PH-QMSHHGMDGLEMLDSISSSMTTLTPMSD 93
PH QMSH GM+ L+MLD ++SMTTLTPMS+
Sbjct: 107 PHHQMSHPGMESLDMLDP-ANSMTTLTPMSE 136
>gi|321466430|gb|EFX77425.1| hypothetical protein DAPPUDRAFT_321295 [Daphnia pulex]
Length = 178
Score = 322 bits (826), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/159 (96%), Positives = 156/159 (98%)
Query: 233 DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
DPRELEAFAERFKQRRIKLGVTQADVGKALANL+LPGVGALSQSTICRFESLTLSHNNMI
Sbjct: 18 DPRELEAFAERFKQRRIKLGVTQADVGKALANLRLPGVGALSQSTICRFESLTLSHNNMI 77
Query: 293 ALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 352
ALKPIL AWLEEAEAQ +NKRRDP+APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP
Sbjct: 78 ALKPILHAWLEEAEAQTRNKRRDPEAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 137
Query: 353 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQ
Sbjct: 138 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQQ 176
>gi|8141|emb|CAA41342.1| Pou-domain protein [Drosophila melanogaster]
gi|227713|prf||1709357A I-POU protein
Length = 367
Score = 322 bits (824), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/159 (97%), Positives = 157/159 (98%), Gaps = 2/159 (1%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA+SQSTICRFESLTL
Sbjct: 193 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAVSQSTICRFESLTL 252
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYF
Sbjct: 253 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYF 310
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 311 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 349
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/82 (47%), Positives = 48/82 (58%), Gaps = 22/82 (26%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMY-HHGMNG-------- 55
+F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MY HH M+G
Sbjct: 56 IFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHHHSMSGPPHASVAD 113
Query: 56 -THGGPNGRPHQMSHHGMDGLE 76
GP G H G DGL+
Sbjct: 114 APLDGPTG------HAGSDGLD 129
>gi|241556601|ref|XP_002399754.1| POU domain protein, putative [Ixodes scapularis]
gi|215499712|gb|EEC09206.1| POU domain protein, putative [Ixodes scapularis]
Length = 282
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 186/249 (74%), Gaps = 39/249 (15%)
Query: 146 MSHH--GMDGLEMLDSIS-SSMTTLTPMSDPTPN--PHQLHSSSMYGPSMNSMMTGHHHH 200
M+HH MDG+++LD + SS+ M+ P P+ PHQ+ +YG M G
Sbjct: 65 MAHHPSTMDGIDLLDPLCPSSLPGPLTMNGPPPDQGPHQI---PLYG------MGGFGGS 115
Query: 201 HHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK 260
H D+D+DPRELEAFAERFKQRRIKLGVTQADVG+
Sbjct: 116 AVH-------------------------DSDSDPRELEAFAERFKQRRIKLGVTQADVGR 150
Query: 261 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 320
ALANLKLPGVG+LSQSTICRFESLTLSHNNM+ALKPIL AWLE AEAQAKNKR D D P
Sbjct: 151 ALANLKLPGVGSLSQSTICRFESLTLSHNNMVALKPILGAWLEAAEAQAKNKRGDSDLPG 210
Query: 321 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ
Sbjct: 211 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 270
Query: 381 KQKRMKFAA 389
KQKRMK++A
Sbjct: 271 KQKRMKYSA 279
>gi|405962730|gb|EKC28379.1| Inhibitory POU protein [Crassostrea gigas]
Length = 364
Score = 304 bits (778), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 193/382 (50%), Positives = 225/382 (58%), Gaps = 102/382 (26%)
Query: 13 LNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMNGTHGGPNGRP--HQMSHH 70
+DG+LSRAE LAAVDI K S+ + +KHD +YH G GG N P HQM
Sbjct: 76 FDDGILSRAEVLAAVDIPKQSSQNL-----MKHDGLYH-GHTADLGGHNVTPPRHQM--- 126
Query: 71 GMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPA 130
Q++ + +GP + + +H G +P
Sbjct: 127 -----------------------------QMNCHTGFGPGDSMLEQLTSNHGMSLGGMPD 157
Query: 131 SHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSM 190
+H+ +A +SI PH H M+ PS+
Sbjct: 158 NHYSIA---------------------NSI----------------PHSHHQ--MFQPSV 178
Query: 191 NSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHP---DTDTDPRELEAFAERFKQR 247
+ + HH G HHPV HP DT+ DPRELEAFAERFKQR
Sbjct: 179 CTNLNAMGSHHTFPG-----------HHPV------HPAIHDTECDPRELEAFAERFKQR 221
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLGVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 222 RIKLGVTQADVGAALANLKLPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAER 281
Query: 308 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 367
QA+ +R++ +A + A E+KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDLK
Sbjct: 282 QAR-ERKEAEAGGL--AAERKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDLK 338
Query: 368 KNVVRVWFCNQRQKQKRMKFAA 389
KNVVRVWFCNQRQKQKRMKF+A
Sbjct: 339 KNVVRVWFCNQRQKQKRMKFSA 360
>gi|390336369|ref|XP_786727.2| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Strongylocentrotus purpuratus]
Length = 350
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 170/272 (62%), Positives = 196/272 (72%), Gaps = 13/272 (4%)
Query: 119 HHHHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPH 178
HHH +SG PA ++P P HH MD E LD IS++ + P S P P
Sbjct: 90 HHHAVNSGMHPAHFAPTSSPVSRGLPH--HHSMDHGEFLD-ISAAASL--PGSGPGPGLS 144
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELE 238
+ S++ + ++ H LP + H + +MP G+ D DTDPRELE
Sbjct: 145 DVQSAAAAAAAAAAV-----SHQSSFTPLPGTGGHFNPMNTMMPHGMGMHDIDTDPRELE 199
Query: 239 AFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPIL 298
AFAERFKQRRIKLGVTQADVGKALANLKLPGVG+LSQSTICRFESLTLSHNNMIALKPIL
Sbjct: 200 AFAERFKQRRIKLGVTQADVGKALANLKLPGVGSLSQSTICRFESLTLSHNNMIALKPIL 259
Query: 299 QAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 358
AWL+EAEA A++ R ++P +L G+KKRKRTSIAAPEKRSLEAYF VQPRPS EKIA
Sbjct: 260 AAWLDEAEAAARDNR---NSPGILDNGDKKRKRTSIAAPEKRSLEAYFTVQPRPSSEKIA 316
Query: 359 AIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQ 390
AIAEKLDLKKNVVRVWFCNQRQKQKRMK++AQ
Sbjct: 317 AIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAQ 348
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 50/101 (49%), Gaps = 19/101 (18%)
Query: 9 LFSGLND-GLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHH------GMNGTHGGPN 61
F L+D G L+RAEALAAVD+ ++ T+K+D Y H GM+ H P
Sbjct: 47 FFGPLDDSGFLARAEALAAVDVMSSMVKTSQPHMTIKNDTNYSHHHAVNSGMHPAHFAPT 106
Query: 62 ------GRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDPTP 96
G PH HH MD E LD IS++ + P S P P
Sbjct: 107 SSPVSRGLPH---HHSMDHGEFLD-ISAAAS--LPGSGPGP 141
>gi|269785107|ref|NP_001161509.1| BRN3 transcription factor [Saccoglossus kowalevskii]
gi|268053987|gb|ACY92480.1| BRN3 transcription factor [Saccoglossus kowalevskii]
Length = 331
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 171/276 (61%), Positives = 193/276 (69%), Gaps = 28/276 (10%)
Query: 116 TGHHHHHHHSGALPASHH-HVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPT 174
TG+HHH + S +HH H++ P+ + H G+D E+L M+ MS+P
Sbjct: 81 TGYHHHMNGS-----NHHPHLSAPT----SRSIHPGLDHGELL---GDPMSMAISMSNPM 128
Query: 175 PNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDP 234
P + +S+ T HH H HH A H +M G+ D DTDP
Sbjct: 129 P----------FTSIGDSITTMAQHHQSHVSMSGHHHHVMAAPHSMMTHGMT--DLDTDP 176
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
RELEAFAE FKQRRIKLGVTQ DVG AL NLKLPGVG+LSQSTICRFESLTLSHNNMIAL
Sbjct: 177 RELEAFAEHFKQRRIKLGVTQCDVGSALGNLKLPGVGSLSQSTICRFESLTLSHNNMIAL 236
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KPIL AWLEEAE AK+K ++PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS
Sbjct: 237 KPILSAWLEEAEKAAKSKDKNPD---IFSNGEKKRKRTSIAAPEKRSLEAYFAVQPRPSS 293
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQ 390
EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+AQ
Sbjct: 294 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAQ 329
>gi|410932847|ref|XP_003979804.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Takifugu rubripes]
Length = 370
Score = 299 bits (766), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 156/209 (74%), Positives = 165/209 (78%), Gaps = 21/209 (10%)
Query: 189 SMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHP------DTDTDPRELEAFAE 242
SMNS +T H G LP HHG + PGL + D+DTDPRELEAFAE
Sbjct: 177 SMNSPLT-------HHGLLPG--HHGGSQ---CGPGLTNTGIPSINDSDTDPRELEAFAE 224
Query: 243 RFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 302
RFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWL
Sbjct: 225 RFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWL 284
Query: 303 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 362
EEAE + K PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAE
Sbjct: 285 EEAEGAQREKMSKPD---IYNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAE 341
Query: 363 KLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
KLDLKKNVVRVWFCNQRQKQKRMKF+A H
Sbjct: 342 KLDLKKNVVRVWFCNQRQKQKRMKFSATH 370
>gi|47230584|emb|CAF99777.1| unnamed protein product [Tetraodon nigroviridis]
Length = 368
Score = 299 bits (765), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 156/209 (74%), Positives = 165/209 (78%), Gaps = 21/209 (10%)
Query: 189 SMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHP------DTDTDPRELEAFAE 242
SMNS +T H G LP HHG + PGL + D+DTDPRELEAFAE
Sbjct: 175 SMNSPLT-------HHGLLPG--HHGGSQGG---PGLTNTGIPSINDSDTDPRELEAFAE 222
Query: 243 RFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 302
RFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWL
Sbjct: 223 RFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWL 282
Query: 303 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 362
EEAE + K PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAE
Sbjct: 283 EEAEGAQREKMSKPD---IYNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAE 339
Query: 363 KLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
KLDLKKNVVRVWFCNQRQKQKRMKF+A H
Sbjct: 340 KLDLKKNVVRVWFCNQRQKQKRMKFSATH 368
>gi|432851959|ref|XP_004067127.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Oryzias latipes]
Length = 370
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/175 (82%), Positives = 152/175 (86%), Gaps = 9/175 (5%)
Query: 223 PGLQHP------DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
PGL +P D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQS
Sbjct: 199 PGLTNPGLSSINDSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQS 258
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNMIALKPILQAWLEEAE + K PD + GEKKRKRTSIAA
Sbjct: 259 TICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMSKPD---IFNGGEKKRKRTSIAA 315
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
PEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+KF+A H
Sbjct: 316 PEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRLKFSAAH 370
>gi|45382097|ref|NP_990090.1| brain-specific homeobox/POU domain protein 3 [Gallus gallus]
gi|2495304|sp|Q91998.1|BRN3_CHICK RecName: Full=Brain-specific homeobox/POU domain protein 3;
Short=Brain-3; Short=Brn-3
gi|1032487|emb|CAA63049.1| brn-3 [Gallus gallus]
gi|1032489|emb|CAA63048.1| brn-3 [Gallus gallus]
Length = 341
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/200 (73%), Positives = 163/200 (81%), Gaps = 7/200 (3%)
Query: 192 SMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKL 251
S M+ +H HHS + SH HG H V + P+T+TDPRELE+FAERFKQRRIKL
Sbjct: 149 SHMSAINHMAHHSQPMNMSHPHGLASHAV----ISGPETETDPRELESFAERFKQRRIKL 204
Query: 252 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 311
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 205 GVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE---RA 261
Query: 312 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
+R P + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 262 QREKMTKPEIYTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 321
Query: 372 RVWFCNQRQKQKRMKFAAQH 391
RVWFCNQRQKQKRMKF+A +
Sbjct: 322 RVWFCNQRQKQKRMKFSATY 341
>gi|57999781|dbj|BAD88442.1| brain-specific homeobox/POU domain protein 3a [Danio rerio]
Length = 366
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/195 (76%), Positives = 158/195 (81%), Gaps = 13/195 (6%)
Query: 203 HSGALPASHHHGATHHPVMPPGLQHP------DTDTDPRELEAFAERFKQRRIKLGVTQA 256
H G LP HHG H PGL + D+DTDPRELEAFAERFKQRRIKLGVTQA
Sbjct: 179 HHGLLPG--HHGGAHQGA--PGLVNNGLPSINDSDTDPRELEAFAERFKQRRIKLGVTQA 234
Query: 257 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 316
DVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K P
Sbjct: 235 DVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMSKP 294
Query: 317 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFC 376
D + EKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFC
Sbjct: 295 D---IFNGSEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFC 351
Query: 377 NQRQKQKRMKFAAQH 391
NQRQKQKR+KF+A H
Sbjct: 352 NQRQKQKRLKFSAAH 366
>gi|348516489|ref|XP_003445771.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Oreochromis niloticus]
Length = 369
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 140/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 210 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 269
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K PD + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 270 NNMIALKPILQAWLEEAEGAQREKMSKPD---IFNGGEKKRKRTSIAAPEKRSLEAYFAV 326
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+KF+A H
Sbjct: 327 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRLKFSAAH 369
>gi|41152054|ref|NP_958442.1| POU domain, class 4, transcription factor 1 [Danio rerio]
gi|33604055|gb|AAH56326.1| POU domain, class 4, transcription factor 1 [Danio rerio]
gi|41946875|gb|AAH65954.1| Pou4f1 protein [Danio rerio]
Length = 366
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 150/195 (76%), Positives = 158/195 (81%), Gaps = 13/195 (6%)
Query: 203 HSGALPASHHHGATHHPVMPPGLQHP------DTDTDPRELEAFAERFKQRRIKLGVTQA 256
H G LP HHG H PGL + D+DTDPRELEAFAERFKQRRIKLGVTQA
Sbjct: 179 HHGLLPG--HHGGAHQGA--PGLVNNGLPSINDSDTDPRELEAFAERFKQRRIKLGVTQA 234
Query: 257 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 316
DVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K P
Sbjct: 235 DVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMSKP 294
Query: 317 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFC 376
D + EKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFC
Sbjct: 295 D---IFNGSEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFC 351
Query: 377 NQRQKQKRMKFAAQH 391
NQRQKQKR+KF+A H
Sbjct: 352 NQRQKQKRLKFSAAH 366
>gi|426375725|ref|XP_004054673.1| PREDICTED: POU domain, class 4, transcription factor 1, partial
[Gorilla gorilla gorilla]
Length = 186
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 27 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 86
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K + P + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 87 NNMIALKPILQAWLEEAEGAQREK---MNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAV 143
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 144 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 186
>gi|397509964|ref|XP_003825378.1| PREDICTED: POU domain, class 4, transcription factor 1, partial
[Pan paniscus]
Length = 174
Score = 292 bits (748), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 15 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 74
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K + P + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 75 NNMIALKPILQAWLEEAEGAQREK---MNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAV 131
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 132 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 174
>gi|395833526|ref|XP_003789781.1| PREDICTED: POU domain, class 4, transcription factor 1 [Otolemur
garnettii]
Length = 316
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 157 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 216
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 217 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 273
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 274 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 316
>gi|148224742|ref|NP_001079200.1| POU class 4 homeobox 1 [Xenopus laevis]
gi|10441360|gb|AAG17008.1|AF184979_1 class IV POU-homeodomain protein [Xenopus laevis]
Length = 343
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 141/198 (71%), Positives = 161/198 (81%), Gaps = 7/198 (3%)
Query: 194 MTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGV 253
M+ +H HH+ ++ +H+H H M +++TDPRELE+FAERFKQRRIKLGV
Sbjct: 153 MSAINHMAHHTQSMNLAHNHALASHATMSCS----ESETDPRELESFAERFKQRRIKLGV 208
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE + +R
Sbjct: 209 TQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE---RAQR 265
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
P + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRV
Sbjct: 266 EKMAKPEIFSGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRV 325
Query: 374 WFCNQRQKQKRMKFAAQH 391
WFCNQRQKQKRMKF+A +
Sbjct: 326 WFCNQRQKQKRMKFSATY 343
>gi|351703117|gb|EHB06036.1| POU domain, class 4, transcription factor 3 [Heterocephalus glaber]
Length = 310
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 151 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 210
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 211 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 267
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 268 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 310
>gi|172087298|ref|XP_001913191.1| brain-specific homeobox/POU domain protein 3 [Oikopleura dioica]
gi|48994299|gb|AAT47873.1| brain-specific homeobox/POU domain protein 3 [Oikopleura dioica]
gi|56694824|gb|AAW23074.1| POU4 [Oikopleura dioica]
gi|313221899|emb|CBY38954.1| unnamed protein product [Oikopleura dioica]
gi|313230047|emb|CBY07751.1| unnamed protein product [Oikopleura dioica]
Length = 384
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/270 (60%), Positives = 191/270 (70%), Gaps = 31/270 (11%)
Query: 133 HHVATPSLLLFPQMSHH----GMDGLEMLDSISSSMTTL---------TPMSDPTPNPHQ 179
HH+++PS+++ PQ+S + G +G E L + + T+ +S P+ + +
Sbjct: 125 HHLSSPSVVV-PQLSSYAVSLGAEGTESLIADGQAYPTIGYGMGLNEAMYISAPSHSQNG 183
Query: 180 LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEA 239
L +S G + NSMM H+SG H G + H MP + DTDPRELEA
Sbjct: 184 LMNS---GLAQNSMMA------HYSGLGTNQIHGGNSTH--MPSA--SAEYDTDPRELEA 230
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FAERFKQRRIKLGVTQADVG+AL LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPILQ
Sbjct: 231 FAERFKQRRIKLGVTQADVGQALGKLKIPGVGSLSQSTICRFESLTLSHNNMVALKPILQ 290
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 359
AWLE AE AK K ++ D EKKRKRTSIAAPEKRSLEAYF VQPRPS EKIAA
Sbjct: 291 AWLERAENAAKAK-KEADG---YTGNEKKRKRTSIAAPEKRSLEAYFTVQPRPSSEKIAA 346
Query: 360 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAEKLDLKKNVVRVWFCNQRQKQKRMKF+A
Sbjct: 347 IAEKLDLKKNVVRVWFCNQRQKQKRMKFSA 376
>gi|431906908|gb|ELK11028.1| POU domain, class 4, transcription factor 1 [Pteropus alecto]
Length = 429
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 270 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 329
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 330 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 386
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 387 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 429
>gi|332841445|ref|XP_003314220.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Pan troglodytes]
Length = 357
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 198 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 257
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 258 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 314
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 315 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 357
>gi|301769209|ref|XP_002920023.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 142 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 201
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 202 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 258
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 259 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 301
>gi|281346918|gb|EFB22502.1| hypothetical protein PANDA_008696 [Ailuropoda melanoleuca]
Length = 297
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 138 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 197
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 198 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 254
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 255 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 297
>gi|344275137|ref|XP_003409370.1| PREDICTED: POU domain, class 4, transcription factor 1-like,
partial [Loxodonta africana]
Length = 199
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 40 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 99
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K + P + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 100 NNMIALKPILQAWLEEAEGAQREK---MNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAV 156
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 157 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 199
>gi|293342246|ref|XP_001076964.2| PREDICTED: uncharacterized protein LOC114503 [Rattus norvegicus]
Length = 352
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 193 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 252
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 253 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 309
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 310 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 352
>gi|440896528|gb|ELR48432.1| POU domain, class 4, transcription factor 1 [Bos grunniens mutus]
Length = 268
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 109 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 168
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 169 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 225
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 226 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 268
>gi|301611601|ref|XP_002935313.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Xenopus (Silurana) tropicalis]
Length = 337
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 183/383 (47%), Positives = 224/383 (58%), Gaps = 90/383 (23%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMNGTHGGPNGRPHQMS 68
+F G ++ LL RAEALAAVDI H S H P+ S
Sbjct: 45 IFGGFDENLLVRAEALAAVDIVSHGKSH--------------------HYKPDA-----S 79
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 128
+H M G+ +S ++ P+S P S +T H HH
Sbjct: 80 YHTMSGIP-----CTSSSSAVPLSHP------------------SALTAHPHHS------ 110
Query: 129 PASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGP 188
H ++G ++LD IS ++T +S + H + SS ++
Sbjct: 111 ------------------VHQCLEG-DLLDHISPTLT----VSGMGASDHTVMSSQLHPH 147
Query: 189 SMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRR 248
+ +M GH H A+ H H + H M D ++DPRELEAFAERFKQRR
Sbjct: 148 HLGAM--GHLHQ-----AMGMGHPHPVSSHNGMSCI---NDVESDPRELEAFAERFKQRR 197
Query: 249 IKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ 308
IKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWL+EAEA
Sbjct: 198 IKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLDEAEAA 257
Query: 309 AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 368
+ K P+ + + E+KRKRTSIAAPEKRSLEAYF++QPRPS EKIAAIAEKLDLKK
Sbjct: 258 YREKNAKPE---LFNSSERKRKRTSIAAPEKRSLEAYFSIQPRPSSEKIAAIAEKLDLKK 314
Query: 369 NVVRVWFCNQRQKQKRMKFAAQH 391
NVVRVWFCNQRQKQKRMK++A H
Sbjct: 315 NVVRVWFCNQRQKQKRMKYSAVH 337
>gi|392353705|ref|XP_341373.4| PREDICTED: POU domain, class 4, transcription factor 1 [Rattus
norvegicus]
Length = 387
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 228 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 287
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 288 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 344
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 345 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 387
>gi|431892513|gb|ELK02946.1| POU domain, class 4, transcription factor 3 [Pteropus alecto]
Length = 338
Score = 290 bits (743), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|11066192|gb|AAG28492.1|AF196575_1 class IV POU-homeodomain protein [Xenopus laevis]
Length = 358
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 138/163 (84%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D++TDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 199 DSETDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 258
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 259 NNMIALKPILQAWLEEAEGAQREKLNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 315
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 316 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 358
>gi|402902239|ref|XP_003919520.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Papio anubis]
Length = 420
Score = 290 bits (742), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 261 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 320
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 321 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 377
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 378 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 420
>gi|455743|gb|AAB29002.1| Brn-3.0=POU-domain protein [mice, trigeminal ganglion, Peptide, 420
aa]
Length = 420
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 261 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 320
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 321 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 377
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 378 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 420
>gi|444725887|gb|ELW66438.1| POU domain, class 4, transcription factor 3 [Tupaia chinensis]
Length = 338
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSTMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|410124577|emb|CBY77550.2| POU-IV a [Pecten maximus]
Length = 329
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 141/161 (87%), Positives = 145/161 (90%), Gaps = 2/161 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT+ DPRELEAFAERFKQRRIKLGVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSH
Sbjct: 167 DTECDPRELEAFAERFKQRRIKLGVTQADVGNALANLKLPGVGSLSQSTICRFESLTLSH 226
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE QA+ KR L EKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 227 NNMIALKPILQAWLEEAEKQAREKREAEGQG--LACSEKKRKRTSIAAPEKRSLEAYFAV 284
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
QPRPSGEKIA IAEKLDLKKNVVRVWFCNQRQKQKRMKF+A
Sbjct: 285 QPRPSGEKIAQIAEKLDLKKNVVRVWFCNQRQKQKRMKFSA 325
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 9 LFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMNGTHGGPNGRP--HQ 66
F G++DGLL+RAE LAAVDI K S+ +KHD +Y H GG N P Q
Sbjct: 38 FFGGVDDGLLARAEVLAAVDISKQSSQQ-----MMKHDGLYGH--TADLGGHNATPSRQQ 90
Query: 67 MSHHGMDGL----EMLDSISSSMT-TLTPMSD 93
+ HG ML+ ++S+ T +L MSD
Sbjct: 91 LQMHGHPSFGPTDVMLEQLTSNPTMSLGGMSD 122
>gi|403285406|ref|XP_003934017.1| PREDICTED: POU domain, class 4, transcription factor 3 [Saimiri
boliviensis boliviensis]
Length = 338
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHSVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|426229808|ref|XP_004008975.1| PREDICTED: POU domain, class 4, transcription factor 3 [Ovis aries]
Length = 338
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|110347449|ref|NP_006228.3| POU domain, class 4, transcription factor 1 [Homo sapiens]
gi|334302933|sp|Q01851.4|PO4F1_HUMAN RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A; AltName: Full=Homeobox/POU
domain protein RDC-1; AltName: Full=Oct-T1
gi|119600991|gb|EAW80585.1| POU domain, class 4, transcription factor 1, isoform CRA_b [Homo
sapiens]
gi|151555159|gb|AAI48793.1| POU class 4 homeobox 1 [synthetic construct]
gi|151556418|gb|AAI48331.1| POU class 4 homeobox 1 [synthetic construct]
Length = 419
Score = 290 bits (742), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 260 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 319
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 320 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 376
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 377 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 419
>gi|418016|gb|AAA65605.1| octamer binding transcription factor 1 [Homo sapiens]
Length = 420
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 261 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 320
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 321 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 377
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 378 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 420
>gi|300796274|ref|NP_001178964.1| POU domain, class 4, transcription factor 3 [Bos taurus]
gi|57043542|ref|XP_544328.1| PREDICTED: POU domain, class 4, transcription factor 3 [Canis lupus
familiaris]
gi|301778637|ref|XP_002924734.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Ailuropoda melanoleuca]
gi|348583198|ref|XP_003477360.1| PREDICTED: POU domain, class 4, transcription factor 3 [Cavia
porcellus]
gi|395817328|ref|XP_003782125.1| PREDICTED: POU domain, class 4, transcription factor 3 [Otolemur
garnettii]
gi|281347269|gb|EFB22853.1| hypothetical protein PANDA_014130 [Ailuropoda melanoleuca]
gi|296485177|tpg|DAA27292.1| TPA: POU class 4 homeobox 3-like [Bos taurus]
gi|351714784|gb|EHB17703.1| POU domain, class 4, transcription factor 3 [Heterocephalus glaber]
gi|440896533|gb|ELR48436.1| POU domain, class 4, transcription factor 3 [Bos grunniens mutus]
Length = 338
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|602106|gb|AAA57161.1| POU domain factor [Homo sapiens]
gi|1582321|prf||2118317B Brn-3a gene
Length = 423
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 264 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 323
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 324 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 380
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 381 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 423
>gi|410948549|ref|XP_003980994.1| PREDICTED: POU domain, class 4, transcription factor 3 [Felis
catus]
Length = 338
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHTAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|51921650|gb|AAU13951.1| Brn3a [Mus musculus]
Length = 421
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 262 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 321
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 322 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 378
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 379 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 421
>gi|334347040|ref|XP_003341880.1| PREDICTED: hypothetical protein LOC100620045 [Monodelphis
domestica]
Length = 377
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 218 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 277
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 278 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 334
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 335 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 377
>gi|332216640|ref|XP_003257458.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Nomascus leucogenys]
Length = 305
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 146 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 205
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 206 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 262
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 263 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 305
>gi|156938250|ref|NP_035273.3| POU domain, class 4, transcription factor 1 [Mus musculus]
gi|341942187|sp|P17208.3|PO4F1_MOUSE RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A; AltName: Full=Brn-3.0
Length = 421
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 262 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 321
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 322 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 378
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 379 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 421
>gi|8490223|gb|AAB30577.2| class V POU transcription factor [Mus sp.]
gi|28932877|gb|AAO60105.1| neuronal transcription factor BRN3a long isoform [Mus musculus]
Length = 421
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 262 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 321
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 322 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 378
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 379 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 421
>gi|247270106|ref|NP_620395.2| POU domain, class 4, transcription factor 3 [Mus musculus]
gi|341941406|sp|Q63955.2|PO4F3_MOUSE RecName: Full=POU domain, class 4, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 3C;
Short=Brain-3C; Short=Brn-3C
gi|148678088|gb|EDL10035.1| POU domain, class 4, transcription factor 3 [Mus musculus]
gi|148877785|gb|AAI45942.1| Pou4f3 protein [Mus musculus]
Length = 338
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|4505965|ref|NP_002691.1| POU domain, class 4, transcription factor 3 [Homo sapiens]
gi|55625186|ref|XP_527063.1| PREDICTED: POU domain, class 4, transcription factor 3 [Pan
troglodytes]
gi|109079182|ref|XP_001100319.1| PREDICTED: POU domain, class 4, transcription factor 3 [Macaca
mulatta]
gi|296193126|ref|XP_002744373.1| PREDICTED: POU domain, class 4, transcription factor 3 [Callithrix
jacchus]
gi|297676316|ref|XP_002816085.1| PREDICTED: POU domain, class 4, transcription factor 3 [Pongo
abelii]
gi|397517875|ref|XP_003829130.1| PREDICTED: POU domain, class 4, transcription factor 3 [Pan
paniscus]
gi|402872948|ref|XP_003900353.1| PREDICTED: POU domain, class 4, transcription factor 3 [Papio
anubis]
gi|426350491|ref|XP_004042805.1| PREDICTED: POU domain, class 4, transcription factor 3 [Gorilla
gorilla gorilla]
gi|2495302|sp|Q15319.1|PO4F3_HUMAN RecName: Full=POU domain, class 4, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 3C;
Short=Brain-3C; Short=Brn-3C
gi|602102|gb|AAA57160.1| POU domain factor [Homo sapiens]
gi|85397011|gb|AAI04924.1| POU class 4 homeobox 3 [Homo sapiens]
gi|85566887|gb|AAI12208.1| POU class 4 homeobox 3 [Homo sapiens]
gi|167773487|gb|ABZ92178.1| POU class 4 homeobox 3 [synthetic construct]
gi|208968685|dbj|BAG74181.1| POU class 4 homeobox 3 [synthetic construct]
gi|313882888|gb|ADR82930.1| POU class 4 homeobox 3 [synthetic construct]
gi|355691717|gb|EHH26902.1| hypothetical protein EGK_16984 [Macaca mulatta]
gi|1582320|prf||2118317A Brn-3c gene
Length = 338
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHTVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|157820659|ref|NP_001102359.1| POU class 4 homeobox 3 [Rattus norvegicus]
gi|149017434|gb|EDL76485.1| POU domain, class 4, transcription factor 3 (predicted) [Rattus
norvegicus]
Length = 338
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|332234875|ref|XP_003266629.1| PREDICTED: POU domain, class 4, transcription factor 3 [Nomascus
leucogenys]
Length = 338
Score = 290 bits (741), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHTVAPHSAMPSCLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|301604667|ref|XP_002931972.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Xenopus (Silurana) tropicalis]
Length = 371
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/163 (84%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D++TDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 212 DSETDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 271
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 272 NNMIALKPILQAWLEEAEGAQREKLNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 328
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 329 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 371
>gi|2981019|gb|AAC06203.1| transcription factor POU4F3 [Homo sapiens]
Length = 338
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHTVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|311250430|ref|XP_003124119.1| PREDICTED: POU domain, class 4, transcription factor 3 [Sus scrofa]
Length = 338
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHTVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|338713587|ref|XP_001501863.3| PREDICTED: POU domain, class 4, transcription factor 3-like [Equus
caballus]
Length = 398
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 172 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 213
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 214 HLHQAMGMSHPHAVAPHSAMPTCLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 271
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 272 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 328
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 329 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 388
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 389 QKRMKYSAVH 398
>gi|148226809|ref|NP_001090776.1| POU class 4 homeobox 1 [Xenopus (Silurana) tropicalis]
gi|134024016|gb|AAI35128.1| pou4f1.2 protein [Xenopus (Silurana) tropicalis]
Length = 340
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/198 (70%), Positives = 160/198 (80%), Gaps = 7/198 (3%)
Query: 194 MTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGV 253
M+ +H HH+ ++ H+H H + +++TDPRELE+FAERFKQRRIKLGV
Sbjct: 150 MSAINHMAHHTQSMNLVHNHSLASHATISCS----ESETDPRELESFAERFKQRRIKLGV 205
Query: 254 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 313
TQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE + K
Sbjct: 206 TQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKM 265
Query: 314 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRV 373
P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRV
Sbjct: 266 AKPE---IFTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRV 322
Query: 374 WFCNQRQKQKRMKFAAQH 391
WFCNQRQKQKRMKF+A +
Sbjct: 323 WFCNQRQKQKRMKFSATY 340
>gi|28932878|gb|AAO60106.1| neuronal transcription factor BRN3a short isoform [Mus musculus]
Length = 337
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 178 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 237
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 238 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 294
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 295 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 337
>gi|344265609|ref|XP_003404875.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Loxodonta africana]
Length = 396
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 170 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 211
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 212 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 269
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 270 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 326
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 327 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 386
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 387 QKRMKYSAVH 396
>gi|126290542|ref|XP_001369099.1| PREDICTED: POU domain, class 4, transcription factor 3 [Monodelphis
domestica]
Length = 337
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 156/249 (62%), Positives = 177/249 (71%), Gaps = 28/249 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHH-----H 202
H G+DG ++L+ IS ++T S + P M T H HH H
Sbjct: 112 HQGLDG-DLLEHISPTLTV----------------SGIGAPEHTVMPTQIHPHHLGAMGH 154
Query: 203 HSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKAL 262
A+ H H + H MP D ++DPRELEAFAERFKQRRIKLGVTQADVG AL
Sbjct: 155 LHQAMGMGHPHAVSTHNGMP---CLSDVESDPRELEAFAERFKQRRIKLGVTQADVGAAL 211
Query: 263 ANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVL 322
ANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 ANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNTKPE---LF 268
Query: 323 PAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQ 382
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQ
Sbjct: 269 NGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQ 328
Query: 383 KRMKFAAQH 391
KRMK++A H
Sbjct: 329 KRMKYSAVH 337
>gi|455744|gb|AAB29003.1| Brn-3.1=POU-domain protein [mice, trigeminal ganglion, Peptide, 338
aa]
Length = 338
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 146/199 (73%), Positives = 159/199 (79%), Gaps = 12/199 (6%)
Query: 200 HHHHSGALP-------ASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLG 252
H HH GA+ SH H H MP L D ++DPRELEAFAERFKQRRIKLG
Sbjct: 145 HPHHLGAMGHLHQPMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLG 202
Query: 253 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 312
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K
Sbjct: 203 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREK 262
Query: 313 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 372
P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 263 NSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVR 319
Query: 373 VWFCNQRQKQKRMKFAAQH 391
VWFCNQRQKQKRMK++A H
Sbjct: 320 VWFCNQRQKQKRMKYSAVH 338
>gi|259155128|ref|NP_001158806.1| POU domain, class 4, transcription factor 2 [Salmo salar]
gi|223647496|gb|ACN10506.1| POU domain, class 4, transcription factor 2 [Salmo salar]
Length = 380
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/212 (71%), Positives = 165/212 (77%), Gaps = 17/212 (8%)
Query: 184 SMYGPSMNSMMTGHHHH-----HHHSGALPASHHHGA-THHPVMPPGLQHPDTDTDPREL 237
SM GP ++ T H H H H AL +H HG +H M D D DPR+L
Sbjct: 178 SMAGPDGSA--TAHPAHMAGMNHMHQAALNMAHAHGLPSHMGCMS------DVDADPRDL 229
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
EAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPI
Sbjct: 230 EAFAERFKQRRIKLGVTQADVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPI 289
Query: 298 LQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 357
LQAWLEEAE K+ R + P + GEKKRKRTSIAAPEKRSLEAYFA+QPRPS EKI
Sbjct: 290 LQAWLEEAE---KSHREKLNKPELYNGGEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKI 346
Query: 358 AAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
AAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 347 AAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 378
>gi|410932089|ref|XP_003979426.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Takifugu rubripes]
Length = 382
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 154/242 (63%), Positives = 179/242 (73%), Gaps = 20/242 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 207
H ++G ++LD I+ + L M+ P S + P+ + M G +H H A+
Sbjct: 159 HQALEG-DLLDHITPGLA-LGAMAGP-------DGSVVSTPAHPAHMAGMNHMHQ--AAI 207
Query: 208 PASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
+H HG +PP + D D DPR+LEAFAERFKQRRIKLGVTQADVG ALA+LK+
Sbjct: 208 NMAHAHG------LPPHMGMTDVDADPRDLEAFAERFKQRRIKLGVTQADVGAALASLKI 261
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK 327
PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R + P + EK
Sbjct: 262 PGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLNKPELFNGAEK 318
Query: 328 KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK+
Sbjct: 319 KRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKY 378
Query: 388 AA 389
+A
Sbjct: 379 SA 380
>gi|546436|gb|AAB30579.1| BRN-3c [Mus musculus]
Length = 338
Score = 288 bits (736), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/248 (62%), Positives = 177/248 (71%), Gaps = 29/248 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 329 QKRMKYSA 336
>gi|47217359|emb|CAG11064.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 142/190 (74%), Positives = 157/190 (82%), Gaps = 9/190 (4%)
Query: 200 HHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVG 259
+H H A+ +H HG +PP + D D DPR+LEAFAERFKQRRIKLGVTQADVG
Sbjct: 22 NHMHQAAINMAHAHG------LPPHMGMTDVDADPRDLEAFAERFKQRRIKLGVTQADVG 75
Query: 260 KALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP 319
ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R + P
Sbjct: 76 AALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLNKP 132
Query: 320 SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQR 379
+ EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQR
Sbjct: 133 ELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQR 192
Query: 380 QKQKRMKFAA 389
QKQKRMK++A
Sbjct: 193 QKQKRMKYSA 202
>gi|66392152|ref|NP_571353.1| POU domain, class 4, transcription factor 3 [Danio rerio]
gi|269849631|sp|Q90435.2|PO4F3_DANRE RecName: Full=POU domain, class 4, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 3.1;
Short=Brain-3.1; Short=zfBrn-3.1
gi|62548392|gb|AAX86839.1| POU domain transcription factor Brn3C [Danio rerio]
Length = 331
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 155/242 (64%), Positives = 173/242 (71%), Gaps = 27/242 (11%)
Query: 155 EMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS-----GALPA 209
++LD ISSS++ S M P S+MT H HH A+
Sbjct: 112 DLLDHISSSLSV----------------SGMGAPPDPSVMTTQAHQHHLQMGHLHQAMAM 155
Query: 210 SHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPG 269
H H + H M D ++DPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PG
Sbjct: 156 GHPHTLSVHNGMACV---NDVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPG 212
Query: 270 VGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 329
VG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K PD + E+KR
Sbjct: 213 VGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNGKPD---LFNGNERKR 269
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
KRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 270 KRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 329
Query: 390 QH 391
H
Sbjct: 330 VH 331
>gi|432847200|ref|XP_004065980.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Oryzias latipes]
Length = 382
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 154/242 (63%), Positives = 179/242 (73%), Gaps = 20/242 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 207
H ++G ++LD I+ + L M+ P S + P+ + M G +H H A+
Sbjct: 159 HQALEG-DLLDHITPGLA-LGAMAGP-------DGSVVSTPAHPAHMAGMNHMHQ--AAI 207
Query: 208 PASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
+H HG +PP + D D DPR+LEAFAERFKQRRIKLGVTQADVG ALA+LK+
Sbjct: 208 NMAHAHG------LPPHMGMNDVDADPRDLEAFAERFKQRRIKLGVTQADVGSALASLKI 261
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK 327
PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R + P + EK
Sbjct: 262 PGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLNKPELFNGAEK 318
Query: 328 KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK+
Sbjct: 319 KRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKY 378
Query: 388 AA 389
+A
Sbjct: 379 SA 380
>gi|348524418|ref|XP_003449720.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Oreochromis niloticus]
Length = 382
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 154/242 (63%), Positives = 179/242 (73%), Gaps = 20/242 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 207
H ++G ++LD I+ + L M+ P S + P+ + M G +H H A+
Sbjct: 159 HQALEG-DLLDHITPGLA-LGAMAGP-------DGSVVSTPAHPAHMAGMNHMHQ--AAI 207
Query: 208 PASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
+H HG +PP + D D DPR+LEAFAERFKQRRIKLGVTQADVG ALA+LK+
Sbjct: 208 NMAHAHG------LPPHMGMNDVDADPRDLEAFAERFKQRRIKLGVTQADVGAALASLKI 261
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK 327
PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R + P + EK
Sbjct: 262 PGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLNKPELFNGAEK 318
Query: 328 KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK+
Sbjct: 319 KRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKY 378
Query: 388 AA 389
+A
Sbjct: 379 SA 380
>gi|395504831|ref|XP_003756750.1| PREDICTED: POU domain, class 4, transcription factor 3 [Sarcophilus
harrisii]
Length = 337
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 156/246 (63%), Positives = 181/246 (73%), Gaps = 22/246 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
H G+DG ++L+ IS ++T ++ + P T P Q+H + GH H
Sbjct: 112 HQGLDG-DLLEHISPTLT-VSGIGAPEHTVMPAQIHPHHLGA-------MGHLHQ----- 157
Query: 206 ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANL 265
A+ H H + H MP D ++DPRELEAFAERFKQRRIKLGVTQADVG ALANL
Sbjct: 158 AMGMGHPHAVSTHNGMP---CLSDVESDPRELEAFAERFKQRRIKLGVTQADVGAALANL 214
Query: 266 KLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAG 325
K+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 215 KIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNTKPE---LFNGS 271
Query: 326 EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM
Sbjct: 272 ERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 331
Query: 386 KFAAQH 391
K++A H
Sbjct: 332 KYSAVH 337
>gi|348583669|ref|XP_003477595.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1-like [Cavia porcellus]
Length = 306
Score = 286 bits (733), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 147 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 206
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 207 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 263
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 264 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 306
>gi|355750291|gb|EHH54629.1| hypothetical protein EGM_15508 [Macaca fascicularis]
Length = 338
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 155/250 (62%), Positives = 177/250 (70%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHTVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWL EAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLGEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>gi|410914858|ref|XP_003970904.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Takifugu rubripes]
Length = 347
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/400 (47%), Positives = 221/400 (55%), Gaps = 94/400 (23%)
Query: 3 VRRYAL--------LFSGLNDGLLSRAEALAAVDIGKHSASSTPTLPTLKHDMMYHHGMN 54
+RR L +F+G ++ LL RAEALAAVDI + S P P D YH
Sbjct: 31 IRRACLPTPSLQGNIFAGFDETLLQRAEALAAVDIV--AQKSHPFKP----DATYH---- 80
Query: 55 GTHGGPNGRPHQMSHHGMDGLEMLDSISSSMTTLTPMS-DPTPNPHQLHSSSMYGPSMNS 113
+MT++T M+ PT + LH S+
Sbjct: 81 -----------------------------TMTSMTSMTCTPTSSSAHLHHPSV------- 104
Query: 114 MMTGHHHHHHHSGALPASHHHVATPSLL--LFPQMSHHGMDGLEMLDSISSSMTTLTPMS 171
+T HHH HH A LL L P +S GM G ++ + S
Sbjct: 105 -LTSHHHPGHHQPA------QGLEGDLLDHLTPGISLGGMTGSDVCSTAS---------- 147
Query: 172 DPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTD 231
H H++ M + + H HG H + G D +
Sbjct: 148 ------HTAHAAHMSAINHMQHHHHSQSMNMHP--------HGLGSHASLGGG---GDAE 190
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
DPRELE+FAERFKQRRIKLGVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM
Sbjct: 191 PDPRELESFAERFKQRRIKLGVTQADVGAALANLKIPGVGCLSQSTICRFESLTLSHNNM 250
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPR 351
+ALKPIL+AWLEEAE + +R P + +KKRKRTSIAAPEKRSLEAYFAVQPR
Sbjct: 251 VALKPILEAWLEEAE---RVQREKMAKPEIFNGADKKRKRTSIAAPEKRSLEAYFAVQPR 307
Query: 352 PSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
PS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A H
Sbjct: 308 PSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH 347
>gi|83751826|gb|ABC42926.1| class IV POU transcription factor [Branchiostoma floridae]
Length = 349
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 159/204 (77%), Gaps = 17/204 (8%)
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQR 247
P+ MTG HH +P HH + H P DTDPRELEAFAE FKQR
Sbjct: 160 PAPTGNMTGMSPHH----LVPNPHHPMSMHDP----------NDTDPRELEAFAEHFKQR 205
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLGVTQADVG+AL LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L+AWL EAE
Sbjct: 206 RIKLGVTQADVGQALGKLKLPGVGSLSQSTICRFESLTLSHNNMVALKPVLEAWLGEAEQ 265
Query: 308 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 367
QA+ K+R PD + EKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLK
Sbjct: 266 QARAKQRSPD---IFNNAEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLK 322
Query: 368 KNVVRVWFCNQRQKQKRMKFAAQH 391
KNVVRVWFCNQRQKQKRMKF+AQ
Sbjct: 323 KNVVRVWFCNQRQKQKRMKFSAQQ 346
>gi|395542581|ref|XP_003773205.1| PREDICTED: POU domain, class 4, transcription factor 2 [Sarcophilus
harrisii]
Length = 353
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 178/243 (73%), Gaps = 21/243 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 207
H ++G E+LD I+ + L M+ P + + S+ + P M +M + H AL
Sbjct: 129 HQALEG-ELLDHITPGLA-LGAMTGPDGS---VVSTPAHAPHMATM------NPMHQAAL 177
Query: 208 PASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
+H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG ALANLK
Sbjct: 178 SMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLK 231
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE 326
+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P + E
Sbjct: 232 IPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPELFNGAE 288
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
KKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK
Sbjct: 289 KKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 348
Query: 387 FAA 389
++A
Sbjct: 349 YSA 351
>gi|32815064|gb|AAP34392.1| POU domain transcription factor Brn3b-s [Danio rerio]
Length = 319
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/243 (62%), Positives = 177/243 (72%), Gaps = 20/243 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 207
H ++G ++LD I+ + M+ P S + P+ + M G +H H A+
Sbjct: 94 HQALEG-DLLDHITPGLALAGAMAGPD-------GSVVSTPAHPAHMAGMNHMHQ--AAI 143
Query: 208 PASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
+H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG ALA+LK
Sbjct: 144 NMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSALASLK 197
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE 326
+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R + P + E
Sbjct: 198 IPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLNKPELFNGAE 254
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
KKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK
Sbjct: 255 KKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 314
Query: 387 FAA 389
++A
Sbjct: 315 YSA 317
>gi|291387569|ref|XP_002710193.1| PREDICTED: POU class 4 homeobox 3-like [Oryctolagus cuniculus]
Length = 166
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/171 (80%), Positives = 149/171 (87%), Gaps = 5/171 (2%)
Query: 221 MPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICR
Sbjct: 1 MPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICR 58
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKR 340
FESLTLSHNNMIALKP+LQAWLEEAEA + K P+ + E+KRKRTSIAAPEKR
Sbjct: 59 FESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---LFNGSERKRKRTSIAAPEKR 115
Query: 341 SLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
SLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A H
Sbjct: 116 SLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 166
>gi|301619177|ref|XP_002938977.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Xenopus (Silurana) tropicalis]
Length = 379
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG TH M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 199 HQAALSMAHAHGLPTHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 252
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 253 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 309
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 310 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 369
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 370 QKRMKYSA 377
>gi|348532016|ref|XP_003453503.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Oreochromis niloticus]
Length = 347
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/195 (73%), Positives = 157/195 (80%), Gaps = 6/195 (3%)
Query: 197 HHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQA 256
H HHHH ++ H HG H + G D + DPRELE+FAERFKQRRIKLGVTQA
Sbjct: 159 HMQHHHHPQSMNM-HPHGLGSHASL--GTAGADAEPDPRELESFAERFKQRRIKLGVTQA 215
Query: 257 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 316
DVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE + +R
Sbjct: 216 DVGAALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE---RAQREKM 272
Query: 317 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFC 376
P + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFC
Sbjct: 273 TKPELFNGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFC 332
Query: 377 NQRQKQKRMKFAAQH 391
NQRQKQKRMKF+A H
Sbjct: 333 NQRQKQKRMKFSATH 347
>gi|348518944|ref|XP_003446991.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Oreochromis niloticus]
Length = 352
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/163 (82%), Positives = 146/163 (89%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D ++DPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 193 DVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 252
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKP+LQAWLEEAEA + K PD + E+KRKRTSIAAPEKRSLEAYFA+
Sbjct: 253 NNMIALKPVLQAWLEEAEAAYREKSSKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAI 309
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A H
Sbjct: 310 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 352
>gi|432895823|ref|XP_004076179.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Oryzias latipes]
Length = 350
Score = 285 bits (729), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/163 (82%), Positives = 146/163 (89%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D ++DPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 191 DVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 250
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKP+LQAWLEEAEA + K PD + E+KRKRTSIAAPEKRSLEAYFA+
Sbjct: 251 NNMIALKPVLQAWLEEAEAAYREKSNKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAI 307
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A H
Sbjct: 308 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH 350
>gi|47086419|ref|NP_997972.1| POU domain, class 4, transcription factor 2 [Danio rerio]
gi|32815062|gb|AAP34391.1| POU domain transcription factor Brn3b-l [Danio rerio]
gi|46804745|dbj|BAD16811.1| Pou4f2/Brn-3b [Danio rerio]
gi|190336895|gb|AAI62336.1| POU domain, class 4, transcription factor 2 [Danio rerio]
gi|190337912|gb|AAI62312.1| POU domain, class 4, transcription factor 2 [Danio rerio]
Length = 384
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/243 (62%), Positives = 177/243 (72%), Gaps = 20/243 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 207
H ++G ++LD I+ + M+ P S + P+ + M G +H H A+
Sbjct: 159 HQALEG-DLLDHITPGLALAGAMAGP-------DGSVVSTPAHPAHMAGMNHMHQ--AAI 208
Query: 208 PASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
+H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG ALA+LK
Sbjct: 209 NMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSALASLK 262
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE 326
+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R + P + E
Sbjct: 263 IPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLNKPELFNGAE 319
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
KKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK
Sbjct: 320 KKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 379
Query: 387 FAA 389
++A
Sbjct: 380 YSA 382
>gi|260812409|ref|XP_002600913.1| hypothetical protein BRAFLDRAFT_215014 [Branchiostoma floridae]
gi|229286203|gb|EEN56925.1| hypothetical protein BRAFLDRAFT_215014 [Branchiostoma floridae]
Length = 166
Score = 285 bits (729), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/165 (83%), Positives = 146/165 (88%), Gaps = 3/165 (1%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
H DTDPRELEAFAE FKQRRIKLGVTQADVG+AL LKLPGVG+LSQSTICRFESLTL
Sbjct: 2 HDPNDTDPRELEAFAEHFKQRRIKLGVTQADVGQALGKLKLPGVGSLSQSTICRFESLTL 61
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
SHNNM+ALKP+L+AWL EAE QA+ K+R PD + EKKRKRTSIAAPEKRSLEAYF
Sbjct: 62 SHNNMVALKPVLEAWLGEAEQQARAKQRSPD---IFNNAEKKRKRTSIAAPEKRSLEAYF 118
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
AVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+AQ
Sbjct: 119 AVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAQQ 163
>gi|281427205|ref|NP_599182.1| POU domain, class 4, transcription factor 2 [Rattus norvegicus]
gi|149037964|gb|EDL92324.1| POU domain, class 4, transcription factor 2 [Rattus norvegicus]
Length = 412
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 207 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 260
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 261 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 320
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 321 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 377
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 378 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 410
>gi|47059067|ref|NP_620394.2| POU domain, class 4, transcription factor 2 [Mus musculus]
gi|2495301|sp|Q63934.1|PO4F2_MOUSE RecName: Full=POU domain, class 4, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 3B;
Short=Brain-3B; Short=Brn-3B; AltName: Full=Brn-3.2
gi|2143434|pir||I58156 Brn-3.2 - mouse
gi|545069|gb|AAC60672.1| Brn-3.2 [Mus sp.]
gi|26352582|dbj|BAC39921.1| unnamed protein product [Mus musculus]
gi|148678910|gb|EDL10857.1| POU domain, class 4, transcription factor 2 [Mus musculus]
gi|162318702|gb|AAI56892.1| POU domain, class 4, transcription factor 2 [synthetic construct]
gi|162319622|gb|AAI56471.1| POU domain, class 4, transcription factor 2 [synthetic construct]
Length = 411
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 206 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 259
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 260 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 319
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 320 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 376
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 377 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 409
>gi|431918288|gb|ELK17515.1| POU domain, class 4, transcription factor 2 [Pteropus alecto]
Length = 408
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 203 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 256
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 257 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 316
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 317 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 373
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 374 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 406
>gi|344291750|ref|XP_003417593.1| PREDICTED: POU domain, class 4, transcription factor 2 [Loxodonta
africana]
Length = 407
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 202 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 255
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 256 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 315
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 316 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 372
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 373 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 405
>gi|391331464|ref|XP_003740166.1| PREDICTED: inhibitory POU protein-like [Metaseiulus occidentalis]
Length = 382
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 176/284 (61%), Positives = 199/284 (70%), Gaps = 34/284 (11%)
Query: 109 PSMNSMMTGHHHHHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLT 168
P M SM +HH G+ S H+ A QMS + G +++D + S L
Sbjct: 116 PDMGSMSM----YHHAMGSTTQSPHNTARS------QMSQMDL-GHDLIDPLCPS--NLP 162
Query: 169 PMS-DPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQH 227
P+ T N Q H + P M G+ HHH A PAS + P G
Sbjct: 163 PLGMTATSNTDQFH----HYP-----MNGNMIHHHQMAAGPASS-------VIDPTG--- 203
Query: 228 PDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
DTDPRELEAFAERFKQRRIKLGVTQADVG+ALANL+LPGVG+LSQSTICRFESLTLS
Sbjct: 204 -GVDTDPRELEAFAERFKQRRIKLGVTQADVGRALANLRLPGVGSLSQSTICRFESLTLS 262
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
HNNM+ALKPIL AWLE AEAQAK KRRDPD P VLPAGEKKRKRTSIAAPEKRSLEA+FA
Sbjct: 263 HNNMVALKPILAAWLEAAEAQAKCKRRDPDMPGVLPAGEKKRKRTSIAAPEKRSLEAFFA 322
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
+QPRPSGE+IA IA KLDLKKNVVRVWFCNQR+KQKRMK++A +
Sbjct: 323 LQPRPSGERIADIASKLDLKKNVVRVWFCNQRRKQKRMKYSASN 366
>gi|126331321|ref|XP_001366960.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Monodelphis domestica]
Length = 412
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 156/243 (64%), Positives = 178/243 (73%), Gaps = 21/243 (8%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGAL 207
H ++G E+LD I+ + L M+ P + + S+ + P M +M + H AL
Sbjct: 188 HQALEG-ELLDHITPGLA-LGAMTGPDGS---VVSTPAHAPHMATM------NPMHQAAL 236
Query: 208 PASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
+H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG ALANLK
Sbjct: 237 SMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLK 290
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE 326
+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P + E
Sbjct: 291 IPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPELFNGAE 347
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
KKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK
Sbjct: 348 KKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 407
Query: 387 FAA 389
++A
Sbjct: 408 YSA 410
>gi|109075830|ref|XP_001098227.1| PREDICTED: POU domain, class 4, transcription factor 2 [Macaca
mulatta]
gi|355687642|gb|EHH26226.1| hypothetical protein EGK_16141 [Macaca mulatta]
Length = 408
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|332217364|ref|XP_003257829.1| PREDICTED: POU domain, class 4, transcription factor 2 [Nomascus
leucogenys]
Length = 408
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|301761736|ref|XP_002916287.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Ailuropoda melanoleuca]
gi|281354088|gb|EFB29672.1| hypothetical protein PANDA_004351 [Ailuropoda melanoleuca]
Length = 408
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|300794126|ref|NP_001179881.1| POU domain, class 4, transcription factor 2 [Bos taurus]
gi|296478787|tpg|DAA20902.1| TPA: Brn3b POU domain transcription factor-like [Bos taurus]
gi|440892619|gb|ELR45731.1| POU domain, class 4, transcription factor 2 [Bos grunniens mutus]
Length = 408
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|149698177|ref|XP_001501851.1| PREDICTED: POU domain, class 4, transcription factor 2 [Equus
caballus]
Length = 406
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 226 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 279
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 280 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 336
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 337 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 396
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 397 QKRMKYSA 404
>gi|73977853|ref|XP_853453.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 3
[Canis lupus familiaris]
Length = 408
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|402870590|ref|XP_003899295.1| PREDICTED: POU domain, class 4, transcription factor 2 [Papio
anubis]
Length = 408
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|348582246|ref|XP_003476887.1| PREDICTED: POU domain, class 4, transcription factor 2-like [Cavia
porcellus]
Length = 408
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|410956775|ref|XP_003985013.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 1
[Felis catus]
gi|410956777|ref|XP_003985014.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 2
[Felis catus]
Length = 265
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 85 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 138
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 139 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 195
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 196 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 255
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 256 QKRMKYSA 263
>gi|395834527|ref|XP_003790251.1| PREDICTED: POU domain, class 4, transcription factor 2 [Otolemur
garnettii]
Length = 407
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 227 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 280
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 281 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 337
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 338 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 397
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 398 QKRMKYSA 405
>gi|444729639|gb|ELW70049.1| POU domain, class 4, transcription factor 2 [Tupaia chinensis]
Length = 265
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 60 AMAGPDGAVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 113
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 114 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 173
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 174 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 230
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 231 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 263
>gi|312469|emb|CAA50589.1| Brn-3b [Homo sapiens]
Length = 264
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 59 AMAGPDGAVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 112
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 113 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 172
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 173 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 229
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 230 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 262
>gi|296195447|ref|XP_002745471.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 1
[Callithrix jacchus]
Length = 408
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|426345637|ref|XP_004040511.1| PREDICTED: POU domain, class 4, transcription factor 2 [Gorilla
gorilla gorilla]
Length = 407
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 227 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 280
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 281 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 337
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 338 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 397
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 398 QKRMKYSA 405
>gi|403272382|ref|XP_003928044.1| PREDICTED: POU domain, class 4, transcription factor 2 [Saimiri
boliviensis boliviensis]
Length = 408
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|297674445|ref|XP_002815238.1| PREDICTED: POU domain, class 4, transcription factor 2 [Pongo
abelii]
Length = 408
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|189054631|dbj|BAG37481.1| unnamed protein product [Homo sapiens]
gi|223459600|gb|AAI36346.1| POU class 4 homeobox 2 [Homo sapiens]
gi|223460822|gb|AAI36345.1| POU class 4 homeobox 2 [Homo sapiens]
Length = 410
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 230 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 283
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 284 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 340
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 341 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 400
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 401 QKRMKYSA 408
>gi|114596306|ref|XP_526699.2| PREDICTED: POU domain, class 4, transcription factor 2 [Pan
troglodytes]
gi|397489785|ref|XP_003815898.1| PREDICTED: POU domain, class 4, transcription factor 2 [Pan
paniscus]
Length = 406
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 226 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 279
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 280 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 336
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 337 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 396
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 397 QKRMKYSA 404
>gi|110347455|ref|NP_004566.2| POU domain, class 4, transcription factor 2 [Homo sapiens]
gi|290457652|sp|Q12837.2|PO4F2_HUMAN RecName: Full=POU domain, class 4, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 3B;
Short=Brain-3B; Short=Brn-3B
gi|119625430|gb|EAX05025.1| POU domain, class 4, transcription factor 2 [Homo sapiens]
Length = 409
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 229 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 282
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 283 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 339
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 340 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 399
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 400 QKRMKYSA 407
>gi|350587752|ref|XP_003129209.3| PREDICTED: POU domain, class 4, transcription factor 2-like [Sus
scrofa]
Length = 322
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 142 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 195
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 196 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 252
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 253 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 312
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 313 QKRMKYSA 320
>gi|355749603|gb|EHH54002.1| hypothetical protein EGM_14732, partial [Macaca fascicularis]
Length = 320
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 115 AMAGPDGAVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 168
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 169 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 228
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 229 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 285
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 286 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 318
>gi|458391|gb|AAA16509.1| Brn-3b [Homo sapiens]
Length = 410
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 230 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 283
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 284 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 340
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 341 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 400
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 401 QKRMKYSA 408
>gi|432093091|gb|ELK25381.1| POU domain, class 4, transcription factor 2 [Myotis davidii]
Length = 404
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 154/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 224 HQAALSMAHTHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 277
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 278 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 334
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
+ EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 335 FNSAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 394
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 395 QKRMKYSA 402
>gi|351714528|gb|EHB17447.1| POU domain, class 4, transcription factor 2 [Heterocephalus glaber]
Length = 205
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 149/212 (70%), Positives = 161/212 (75%), Gaps = 16/212 (7%)
Query: 185 MYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPREL 237
M GP + + T H H H AL +H HG +H M D D DPR+L
Sbjct: 1 MAGPDGSVVSTPAHAPHMGTMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRDL 54
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
EAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPI
Sbjct: 55 EAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPI 114
Query: 298 LQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 357
LQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKI
Sbjct: 115 LQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKI 171
Query: 358 AAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
AAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 172 AAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 203
>gi|327273944|ref|XP_003221739.1| PREDICTED: POU domain, class 4, transcription factor 2-like [Anolis
carolinensis]
Length = 342
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 144/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 162 HQAALSMAHAHGLPAHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 215
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 216 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 272
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
GEKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 273 FNGGEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 332
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 333 QKRMKYSA 340
>gi|169144954|gb|ACA49233.1| POU domain class 4 transcription factor 2 [Homo sapiens]
Length = 403
Score = 283 bits (725), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 223 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 276
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 277 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 333
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 334 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 393
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 394 QKRMKYSA 401
>gi|350587754|ref|XP_003482480.1| PREDICTED: POU domain, class 4, transcription factor 2 [Sus scrofa]
Length = 408
Score = 283 bits (724), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 228 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 281
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 282 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 338
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 339 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 398
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 399 QKRMKYSA 406
>gi|119904806|ref|XP_001253068.1| PREDICTED: POU domain, class 4, transcription factor 1 [Bos taurus]
Length = 241
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/175 (79%), Positives = 148/175 (84%), Gaps = 6/175 (3%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
+HP P H +PRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQS
Sbjct: 73 NHPFKPDATYH---TKNPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQS 129
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAA
Sbjct: 130 TICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAA 186
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
PEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 187 PEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 241
>gi|546434|gb|AAB30578.1| BRN-3b [Mus musculus]
Length = 322
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 117 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 170
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 171 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 230
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 231 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 287
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQK++K++A
Sbjct: 288 IAAIAEKLDLKKNVVRVWFCNQRQKQKKVKYSA 320
>gi|432901481|ref|XP_004076857.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Oryzias latipes]
Length = 348
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/163 (82%), Positives = 144/163 (88%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D + DPRELE+FAERFKQRRIKLGVTQADVG ALANLK+PGVG LSQSTICRFESLTLSH
Sbjct: 189 DAEPDPRELESFAERFKQRRIKLGVTQADVGAALANLKIPGVGCLSQSTICRFESLTLSH 248
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKPIL+AWLEEAE + +R P + G+KKRKRTSIAAPEKRSLEAYFAV
Sbjct: 249 NNMVALKPILEAWLEEAE---RAQREKMSKPEIFNGGDKKRKRTSIAAPEKRSLEAYFAV 305
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A H
Sbjct: 306 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH 348
>gi|395745467|ref|XP_003778272.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Pongo abelii]
Length = 491
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/187 (75%), Positives = 150/187 (80%), Gaps = 11/187 (5%)
Query: 213 HGATHHPVMPPGLQHPD--------TDTDPRELEAFAERFKQRRIKLGVTQADVGKALAN 264
H + P P GL+ P PRELEAFAERFKQRRIKLGVTQADVG ALAN
Sbjct: 308 HDSPRGPTGPGGLRGPSGCXTLFTLXXXXPRELEAFAERFKQRRIKLGVTQADVGSALAN 367
Query: 265 LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA 324
LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K P+ +
Sbjct: 368 LKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPE---LFNG 424
Query: 325 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR
Sbjct: 425 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 484
Query: 385 MKFAAQH 391
MKF+A +
Sbjct: 485 MKFSATY 491
>gi|121582392|ref|NP_001073527.1| uncharacterized protein LOC572084 [Danio rerio]
gi|118764114|gb|AAI28836.1| Zgc:158291 [Danio rerio]
Length = 343
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/163 (82%), Positives = 145/163 (88%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D++ DPRELE+FAERFKQRRIKLGVTQADVG ALANLK+PGVG LSQSTICRFESLTLSH
Sbjct: 184 DSEPDPRELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSH 243
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKPIL+AWLEEAE + K P+ + G+KKRKRTSIAAPEKRSLEAYFAV
Sbjct: 244 NNMVALKPILEAWLEEAERAQREKMAKPE---IFNGGDKKRKRTSIAAPEKRSLEAYFAV 300
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A H
Sbjct: 301 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATH 343
>gi|345326620|ref|XP_001511297.2| PREDICTED: hypothetical protein LOC100080414 [Ornithorhynchus
anatinus]
Length = 827
Score = 281 bits (719), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/219 (68%), Positives = 163/219 (74%), Gaps = 16/219 (7%)
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHH------HHSGALPASHHHGA-THHPVMPPGLQHPD 229
P L +M GP + + T H H H AL +H HG +H M D
Sbjct: 202 PPGLALGAMAGPDGSVVSTPAHGPHLGGMNPMHQAALGMAHAHGLPSHMGCMS------D 255
Query: 230 TDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D DPR+LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHN
Sbjct: 256 VDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHN 315
Query: 290 NMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQ 349
NMIALKPILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+Q
Sbjct: 316 NMIALKPILQAWLEEAE---KSHREKLTKPELFSGAEKKRKRTSIAAPEKRSLEAYFAIQ 372
Query: 350 PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFA 388
PRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++
Sbjct: 373 PRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYS 411
>gi|339242071|ref|XP_003376961.1| POU domain, class 4, transcription factor 1 [Trichinella spiralis]
gi|316974298|gb|EFV57794.1| POU domain, class 4, transcription factor 1 [Trichinella spiralis]
Length = 338
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 146/159 (91%), Gaps = 2/159 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +TDPRELEAFAE FKQRRIKLGVTQADVGKALANLKLPGVG+LSQSTICRFESLTLSH
Sbjct: 182 DLETDPRELEAFAEHFKQRRIKLGVTQADVGKALANLKLPGVGSLSQSTICRFESLTLSH 241
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIAL+PIL AWL++AEA AKNK ++ + +LP EKKRKRTSIAAPEKRSLEAYF V
Sbjct: 242 NNMIALRPILSAWLDQAEAVAKNKLKENNG--ILPNIEKKRKRTSIAAPEKRSLEAYFTV 299
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
QPRPSGEKIAAIAEKL+LKKNVVRVWFCNQRQKQKR+ +
Sbjct: 300 QPRPSGEKIAAIAEKLELKKNVVRVWFCNQRQKQKRLNY 338
>gi|2245514|gb|AAB62538.1| class IV POU protein [Herdmania curvata]
Length = 422
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 135/179 (75%), Positives = 148/179 (82%), Gaps = 6/179 (3%)
Query: 211 HHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGV 270
HH A P+ P L D +TDPRELEAFAERFKQRRIKLGVTQ +VG+ALA LKLPGV
Sbjct: 243 QHHTACSPPITHPSLPVGDYETDPRELEAFAERFKQRRIKLGVTQCNVGQALAKLKLPGV 302
Query: 271 GALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRK 330
G+LSQSTICRFESLTLSHNNM+ALKPIL WLE+AEA+ + K D EKKRK
Sbjct: 303 GSLSQSTICRFESLTLSHNNMVALKPILMTWLEQAEAEYRRKMEDSG------LAEKKRK 356
Query: 331 RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
RTSIAAPEKRSLEAYF++QPRPS EKIAAIA+KLDLKKNVVRVWFCNQRQKQKRMKF+A
Sbjct: 357 RTSIAAPEKRSLEAYFSLQPRPSSEKIAAIADKLDLKKNVVRVWFCNQRQKQKRMKFSA 415
>gi|74136077|ref|NP_001027972.1| POU domain, class 4, transcription factor [Ciona intestinalis]
gi|56900898|gb|AAW31742.1| POU IV homeodomain transcription factor [Ciona intestinalis]
Length = 412
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 184/404 (45%), Positives = 217/404 (53%), Gaps = 79/404 (19%)
Query: 9 LFSGLNDGLLSR-AEALAAVDI-GKHSASSTPT----LPTLKHDMMYHHGMNGT------ 56
LF+G ++ L+R AEALAAV+ GK PT P H + H +
Sbjct: 58 LFAGFDESFLARQAEALAAVEYPGKSQFKPEPTNHSYYPPAPHYVTQQHTTSAVPPPVYS 117
Query: 57 --HGGPNGRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSM 114
H P +D +++D + SS L PT P +SS M M S
Sbjct: 118 SMHPPPAFHHSAALQTSLDSSDVIDQLGSSHCGL-----PTYQPPTFNSSVM----MTSD 168
Query: 115 MTGHHHHHHHSGAL--PASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSD 172
+T H+ H P +H H + ++ S ++TP+S
Sbjct: 169 VTSQPHYITHPAPTYNPPNHFHPTSSAM---------------------HSTVSVTPISA 207
Query: 173 PTPNPHQLHSSSMYGPS-------MNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL 225
P + S P N +TG P P
Sbjct: 208 PIITQAGKYGSGCTTPRDQWDDDVTNVFVTGSP--------------------PPSVPSF 247
Query: 226 QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
+ D DPRELEAFAERFKQRRIKLGVTQ DVG+ALANLKLPGVG+LSQSTICRFESLT
Sbjct: 248 TSNEYDADPRELEAFAERFKQRRIKLGVTQNDVGQALANLKLPGVGSLSQSTICRFESLT 307
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LSHNNM+ALKPIL WLE+AE + + K + GEKKRKRTSIAAPEKRSLEAY
Sbjct: 308 LSHNNMVALKPILITWLEKAEEEHRRKMEN------AAMGEKKRKRTSIAAPEKRSLEAY 361
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
FAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A
Sbjct: 362 FAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSA 405
>gi|345328468|ref|XP_001514803.2| PREDICTED: hypothetical protein LOC100084310 [Ornithorhynchus
anatinus]
Length = 446
Score = 278 bits (711), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/255 (59%), Positives = 168/255 (65%), Gaps = 34/255 (13%)
Query: 168 TPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHH------------------HSGALPA 209
+P S P P HS +Y +M SM + H LPA
Sbjct: 195 SPASAPLPGSVPPHSRKLYTFTMMSMNSKQAFSMHPIMHEPKYTHLQTSSEAIRRACLPA 254
Query: 210 SHHH----GATHHPVMPPGLQHPDTDT---------DPRELEAFAERFKQRRIKLGVTQA 256
G + ++ P+T T DPRELE+FAERFKQRRIKLGVTQA
Sbjct: 255 PQERLQRFGWVKLSLTRRVVREPNTVTLVXXXXXXXDPRELESFAERFKQRRIKLGVTQA 314
Query: 257 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 316
DVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE + K P
Sbjct: 315 DVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQREKLTKP 374
Query: 317 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFC 376
+A G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFC
Sbjct: 375 EA---YGGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFC 431
Query: 377 NQRQKQKRMKFAAQH 391
NQRQKQKRMKF+A +
Sbjct: 432 NQRQKQKRMKFSATY 446
>gi|449499957|ref|XP_002187604.2| PREDICTED: POU domain, class 4, transcription factor 2 [Taeniopygia
guttata]
Length = 373
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 135/161 (83%), Positives = 143/161 (88%), Gaps = 3/161 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D D DPR+LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 214 DVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 273
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+
Sbjct: 274 NNMIALKPILQAWLEEAE---KSHREKLAKPELFSGAEKKRKRTSIAAPEKRSLEAYFAL 330
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 331 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 371
>gi|70570942|dbj|BAE06649.1| transcription factor protein [Ciona intestinalis]
Length = 388
Score = 277 bits (708), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 182/397 (45%), Positives = 217/397 (54%), Gaps = 89/397 (22%)
Query: 9 LFSGLNDGLLSR-AEALAAVDI-GKHSASSTPT----LPTLKHDMMYHHGMNGT------ 56
LF+G ++ L+R AEALAAV+ GK PT P H + H +
Sbjct: 58 LFAGFDESFLARQAEALAAVEYPGKSQFKPEPTNHSYYPPAPHYVTQQHTTSAVPPPVYS 117
Query: 57 --HGGPNGRPHQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSM 114
H P +D +++D + SS L PT P +SS M M S
Sbjct: 118 SMHPPPAFHHSAALQTSLDSSDVIDQLGSSHCGL-----PTYQPPTFNSSVM----MTSD 168
Query: 115 MTGHHHHHHHSGAL--PASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSD 172
+T H+ H P +H H + ++ S ++TP+S
Sbjct: 169 VTSQPHYITHPAPTYNPPNHFHPTSSAM---------------------HSTVSVTPISA 207
Query: 173 PTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDT 232
P ++T +G+ P S P + D
Sbjct: 208 P-------------------IIT-------QAGSPPPSV-----------PSFTSNEYDA 230
Query: 233 DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
DPRELEAFAERFKQRRIKLGVTQ DVG+ALANLKLPGVG+LSQSTICRFESLTLSHNNM+
Sbjct: 231 DPRELEAFAERFKQRRIKLGVTQNDVGQALANLKLPGVGSLSQSTICRFESLTLSHNNMV 290
Query: 293 ALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 352
ALKPIL WLE+AE + + K + GEKKRKRTSIAAPEKRSLEAYFAVQPRP
Sbjct: 291 ALKPILITWLEKAEEEHRRKMEN------AAMGEKKRKRTSIAAPEKRSLEAYFAVQPRP 344
Query: 353 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
S EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A
Sbjct: 345 SSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSA 381
>gi|35915|emb|CAA45907.1| RDC-1 [Homo sapiens]
Length = 331
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 135/163 (82%), Positives = 144/163 (88%), Gaps = 5/163 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAF FKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 174 DSDTDPRELEAFGS-FKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 232
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE ++ + P + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 233 NNMIALKPILQAWLEEAEGPSEKMNK----PELFNGGEKKRKRTSIAAPEKRSLEAYFAV 288
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 289 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 331
>gi|544926|gb|AAB29703.1| class IV POU transcription factor gene Brn-3a product [mice, liver,
Peptide Partial, 147 aa, segment 2 of 2]
Length = 147
Score = 269 bits (688), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 130/150 (86%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
RELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIAL
Sbjct: 1 RELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIAL 60
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KPILQAWLEEAE +R + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS
Sbjct: 61 KPILQAWLEEAEGA---QREKMNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSS 117
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR
Sbjct: 118 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 147
>gi|1083241|pir||S41513 Brn-3c protein - mouse
Length = 250
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 137/187 (73%), Positives = 146/187 (78%), Gaps = 19/187 (10%)
Query: 213 HGATHHPVMPPGLQH-----PDTDTDP----------RELEAFAERFKQRRIKLGVTQAD 257
HG +HP P H P T T P RELEAFAERFKQRRIKLGVTQAD
Sbjct: 68 HG-KNHPFKPDATYHTMSSVPCTSTSPTVPISHPAALRELEAFAERFKQRRIKLGVTQAD 126
Query: 258 VGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD 317
VG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+
Sbjct: 127 VGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE 186
Query: 318 APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN 377
+ E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCN
Sbjct: 187 ---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCN 243
Query: 378 QRQKQKR 384
QRQKQKR
Sbjct: 244 QRQKQKR 250
>gi|544932|gb|AAB29707.1| class IV POU transcription factor gene Brn-3c product [mice, liver,
Peptide Partial, 147 aa, segment 2 of 2]
Length = 147
Score = 266 bits (681), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 127/150 (84%), Positives = 135/150 (90%), Gaps = 3/150 (2%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
RELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIAL
Sbjct: 1 RELEAFAERFKQRRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIAL 60
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+LQAWLEEAEA + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS
Sbjct: 61 KPVLQAWLEEAEAAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSS 117
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR
Sbjct: 118 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 147
>gi|119600990|gb|EAW80584.1| POU domain, class 4, transcription factor 1, isoform CRA_a [Homo
sapiens]
Length = 256
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 128/148 (86%), Positives = 133/148 (89%), Gaps = 3/148 (2%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 112 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 171
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EK
Sbjct: 172 ILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEK 228
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
IAAIAEKLDLKKNVVRVWFCNQRQKQKR
Sbjct: 229 IAAIAEKLDLKKNVVRVWFCNQRQKQKR 256
>gi|1083240|pir||S41512 Brn-3b protein - mouse
Length = 236
Score = 265 bits (676), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 127/150 (84%), Positives = 134/150 (89%), Gaps = 3/150 (2%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
R+LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIAL
Sbjct: 90 RDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIAL 149
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KPILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS
Sbjct: 150 KPILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSS 206
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
EKIAAIAEKLDLKKNVVRVWFCNQRQKQK+
Sbjct: 207 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKK 236
>gi|443691526|gb|ELT93355.1| hypothetical protein CAPTEDRAFT_137474 [Capitella teleta]
Length = 194
Score = 264 bits (675), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 130/162 (80%), Positives = 139/162 (85%), Gaps = 3/162 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D D DPRELEAFAE FKQRRIKLGVTQADVG AL LKLPGVG+LSQSTICRFESLTLSH
Sbjct: 29 DLDCDPRELEAFAEHFKQRRIKLGVTQADVGNALGKLKLPGVGSLSQSTICRFESLTLSH 88
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFA 347
NNM+ALKP+L AWLEEAE A+ + + A GE+KRKRTSIAAPEKRSLEAYF
Sbjct: 89 NNMVALKPVLLAWLEEAEKTAREAK--AAGGDLFGANGERKRKRTSIAAPEKRSLEAYFT 146
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+QPRPSGEKIA IA+KLDLKKNVVRVWFCNQRQKQKRMKFAA
Sbjct: 147 IQPRPSGEKIAQIADKLDLKKNVVRVWFCNQRQKQKRMKFAA 188
>gi|440572045|gb|AGC12567.1| Brn3, partial [Platynereis dumerilii]
Length = 231
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 135/161 (83%), Positives = 142/161 (88%), Gaps = 3/161 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D D DPRELEAFAE KQRRIKLGVTQADVG AL LKLPGVG+LSQSTICRFESLTLSH
Sbjct: 62 DADCDPRELEAFAEHSKQRRIKLGVTQADVGSALGKLKLPGVGSLSQSTICRFESLTLSH 121
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKP+LQAWLEEAEA A+ + + DA L EKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 122 NNMIALKPVLQAWLEEAEAAARESKANADA---LGGAEKKRKRTSIAAPEKRSLEAYFAV 178
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
QPRPSGEKIA IAEKLDLK+NVVRVWFCNQRQKQKRMKFA+
Sbjct: 179 QPRPSGEKIAQIAEKLDLKENVVRVWFCNQRQKQKRMKFAS 219
>gi|544929|gb|AAB29705.1| class IV POU transcription factor gene Brn-3b product [mice, liver,
Peptide Partial, 147 aa, segment 2 of 2]
Length = 147
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/150 (84%), Positives = 134/150 (89%), Gaps = 3/150 (2%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
R+LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIAL
Sbjct: 1 RDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIAL 60
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KPILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS
Sbjct: 61 KPILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSS 117
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
EKIAAIAEKLDLKKNVVRVWFCNQRQKQK+
Sbjct: 118 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKK 147
>gi|268573958|ref|XP_002641956.1| C. briggsae CBR-UNC-86 protein [Caenorhabditis briggsae]
Length = 357
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 135/225 (60%), Positives = 162/225 (72%), Gaps = 13/225 (5%)
Query: 161 SSSMTTLTPMSDPTPNPHQLHSSSMYG-PSMNSMMTGHHHHHHHSGALPASHHHGATHHP 219
+SS +TP+ Q+ + YG P H H + +L S++ T +P
Sbjct: 98 TSSEDQMTPL-------QQVMAMQTYGAPPQFQYNMSHMTQHFTTSSLSTSNN--ITRYP 148
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTIC 279
+ PP + +TDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQSTIC
Sbjct: 149 IAPP---TSELETDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTIC 205
Query: 280 RFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEK 339
RFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAAPEK
Sbjct: 206 RFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAAPEK 265
Query: 340 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
R LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 266 RELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 310
>gi|170585378|ref|XP_001897461.1| transcription factor unc-86 [Brugia malayi]
gi|158595140|gb|EDP33713.1| transcription factor unc-86, putative [Brugia malayi]
Length = 239
Score = 263 bits (672), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/166 (76%), Positives = 139/166 (83%)
Query: 219 PVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
P+ P Q + DTDPRELE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQSTI
Sbjct: 41 PIYPLSAQATELDTDPRELERFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTI 100
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
CRFESLTLSHNNM+ALKPIL +WLE+AE K K DA +LP +KKRKRTSIAAPE
Sbjct: 101 CRFESLTLSHNNMVALKPILHSWLEKAEEVTKTKDMAGDAQGILPNMDKKRKRTSIAAPE 160
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
KR LE YF QPRPSGE+I+AIA KLDLKKNVVRVWFCNQRQKQKR
Sbjct: 161 KRLLEDYFRQQPRPSGERISAIANKLDLKKNVVRVWFCNQRQKQKR 206
>gi|402594024|gb|EJW87951.1| hypothetical protein WUBG_01136 [Wuchereria bancrofti]
Length = 212
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/166 (76%), Positives = 139/166 (83%)
Query: 219 PVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
P+ P Q + DTDPRELE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQSTI
Sbjct: 41 PIYPLSAQATELDTDPRELERFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTI 100
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
CRFESLTLSHNNM+ALKPIL +WLE+AE K K DA +LP +KKRKRTSIAAPE
Sbjct: 101 CRFESLTLSHNNMVALKPILHSWLEKAEEVTKTKDMAGDAQGILPNMDKKRKRTSIAAPE 160
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
KR LE YF QPRPSGE+I+AIA KLDLKKNVVRVWFCNQRQKQKR
Sbjct: 161 KRLLEDYFRQQPRPSGERISAIANKLDLKKNVVRVWFCNQRQKQKR 206
>gi|348020107|gb|AEP43995.1| POU domain class 4 transcription factor 3 [Craspedacusta sowerbyi]
Length = 341
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 139/161 (86%), Gaps = 3/161 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
+T+ PRELE FAERFKQRRIKLGVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSH
Sbjct: 183 ETECTPRELEWFAERFKQRRIKLGVTQADVGAALAHLKLPGVGSLSQSTICRFESLTLSH 242
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKP+L AWL+EAE + K +D + LP +KKRKRTSI A EKRSLEAYFA+
Sbjct: 243 NNMMALKPVLSAWLDEAERANRMKAKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAM 299
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
QPRPS +KIAAIAEKLDL KNVVRVWFCNQRQK+KRMKF+
Sbjct: 300 QPRPSSDKIAAIAEKLDLSKNVVRVWFCNQRQKKKRMKFSV 340
>gi|392895731|ref|NP_001021191.2| Protein UNC-86, isoform b [Caenorhabditis elegans]
gi|351020669|emb|CCD62656.1| Protein UNC-86, isoform b [Caenorhabditis elegans]
Length = 357
Score = 261 bits (668), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 140/168 (83%), Gaps = 3/168 (1%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
+P+ PP D DTDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQS
Sbjct: 146 RYPIAPPT---SDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQS 202
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAA
Sbjct: 203 TICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAA 262
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
PEKR LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 263 PEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 310
>gi|392895729|ref|NP_498795.2| Protein UNC-86, isoform a [Caenorhabditis elegans]
gi|351020668|emb|CCD62655.1| Protein UNC-86, isoform a [Caenorhabditis elegans]
Length = 319
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 140/168 (83%), Gaps = 3/168 (1%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
+P+ PP D DTDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQS
Sbjct: 108 RYPIAPPT---SDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQS 164
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAA
Sbjct: 165 TICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAA 224
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
PEKR LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 225 PEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 272
>gi|195478798|ref|XP_002100657.1| GE16054 [Drosophila yakuba]
gi|194188181|gb|EDX01765.1| GE16054 [Drosophila yakuba]
Length = 218
Score = 261 bits (667), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 153/248 (61%), Positives = 161/248 (64%), Gaps = 59/248 (23%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH G
Sbjct: 2 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----HHHPG 52
Query: 206 ALPASHHH----GATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQAD 257
L A HHPV+ + HPDTDTDPRELEAFAERFKQRRIK
Sbjct: 53 TLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIK------- 105
Query: 258 VGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD 317
MIALKPILQAWLEEAEAQAKNKRRDPD
Sbjct: 106 ---------------------------------MIALKPILQAWLEEAEAQAKNKRRDPD 132
Query: 318 APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN 377
APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN
Sbjct: 133 APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN 192
Query: 378 QRQKQKRM 385
QRQKQKR+
Sbjct: 193 QRQKQKRI 200
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 35/62 (56%), Gaps = 11/62 (17%)
Query: 69 HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 126
HH MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH G
Sbjct: 2 HHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----HHHPG 52
Query: 127 AL 128
L
Sbjct: 53 TL 54
>gi|348020105|gb|AEP43994.1| POU domain class 4 transcription factor 2 [Craspedacusta sowerbyi]
Length = 296
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 124/161 (77%), Positives = 139/161 (86%), Gaps = 3/161 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
+T+ PRELE FAERFKQRRIKLGVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSH
Sbjct: 138 ETECTPRELEWFAERFKQRRIKLGVTQADVGAALAHLKLPGVGSLSQSTICRFESLTLSH 197
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKP+L AWL+EAE + K +D + LP +KKRKRTSI A EKRSLEAYFA+
Sbjct: 198 NNMMALKPVLSAWLDEAERANRIKAKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAM 254
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
QPRPS +KIAAIAEKLDL KNVVRVWFCNQRQK+KRMKF+
Sbjct: 255 QPRPSSDKIAAIAEKLDLSKNVVRVWFCNQRQKKKRMKFSV 295
>gi|449662025|ref|XP_004205460.1| PREDICTED: POU domain, class 4, transcription factor 2-like isoform
2 [Hydra magnipapillata]
Length = 302
Score = 260 bits (664), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 123/161 (76%), Positives = 138/161 (85%), Gaps = 3/161 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
+ + PRELE FAERFKQRRIKLGVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSH
Sbjct: 144 EVECTPRELEWFAERFKQRRIKLGVTQADVGTALAHLKLPGVGSLSQSTICRFESLTLSH 203
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKP+L AWL+EAE + K +D + LP +KKRKRTSI A EKRSLEAYFA+
Sbjct: 204 NNMMALKPVLSAWLDEAERANRMKSKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAM 260
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
QPRPS +KIAAIAEKLDL KNVVRVWFCNQRQK+KRMKF+
Sbjct: 261 QPRPSSDKIAAIAEKLDLSKNVVRVWFCNQRQKKKRMKFSV 301
>gi|393909758|gb|EJD75577.1| hypothetical protein LOAG_17292 [Loa loa]
Length = 329
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/154 (80%), Positives = 134/154 (87%)
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNN
Sbjct: 167 DTDPRELERFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNN 226
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
M+ALKPIL +WLE+AE K K DA +LP +KKRKRTSIAAPEKR LE YF QP
Sbjct: 227 MVALKPILHSWLEKAEEVTKTKDIAGDAQGILPNMDKKRKRTSIAAPEKRLLEDYFRQQP 286
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
RPSGE+I+AIA KLDLKKNVVRVWFCNQRQKQKR
Sbjct: 287 RPSGERISAIASKLDLKKNVVRVWFCNQRQKQKR 320
>gi|221114520|ref|XP_002158636.1| PREDICTED: POU domain, class 4, transcription factor 2-like isoform
1 [Hydra magnipapillata]
Length = 302
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/161 (76%), Positives = 138/161 (85%), Gaps = 3/161 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
+ + PRELE FAERFKQRRIKLGVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSH
Sbjct: 144 EVECTPRELEWFAERFKQRRIKLGVTQADVGTALAHLKLPGVGSLSQSTICRFESLTLSH 203
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKP+L AWL+EAE + K +D + LP +KKRKRTSI A EKRSLEAYFA+
Sbjct: 204 NNMMALKPVLSAWLDEAERANRMKSKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAM 260
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
QPRPS +KIAAIAEKLDL KNVVRVWFCNQRQK+KRMKF+
Sbjct: 261 QPRPSSDKIAAIAEKLDLSKNVVRVWFCNQRQKKKRMKFSV 301
>gi|137030|sp|P13528.1|UNC86_CAEEL RecName: Full=Transcription factor unc-86; AltName:
Full=Uncoordinated protein 86
gi|156486|gb|AAA28158.1| unc-86 protein [Caenorhabditis elegans]
Length = 467
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 140/168 (83%), Gaps = 3/168 (1%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
+P+ PP D DTDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQS
Sbjct: 256 RYPIAPPT---SDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQS 312
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAA
Sbjct: 313 TICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAA 372
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
PEKR LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 373 PEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 420
>gi|156487|gb|AAA28159.1| unc-86 alternate protein [Caenorhabditis elegans]
Length = 429
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 140/168 (83%), Gaps = 3/168 (1%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
+P+ PP D DTDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQS
Sbjct: 218 RYPIAPPT---SDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQS 274
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAA
Sbjct: 275 TICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAA 334
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
PEKR LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 335 PEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 382
>gi|324510692|gb|ADY44470.1| Transcription factor unc-86 [Ascaris suum]
Length = 352
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/158 (77%), Positives = 136/158 (86%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
+ DTDPRELE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSH
Sbjct: 170 EVDTDPRELERFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSH 229
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKPIL +WL++AE K K D +LP +KKRKRTSIAAPEKR LE YF
Sbjct: 230 NNMVALKPILHSWLDKAEEAMKTKDSVGDTQGILPNTDKKRKRTSIAAPEKRLLEDYFRQ 289
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
QPRPSGE+I+AIA+KLDLKKNVVRVWFCNQRQKQKR +
Sbjct: 290 QPRPSGERISAIADKLDLKKNVVRVWFCNQRQKQKRCR 327
>gi|341897269|gb|EGT53204.1| CBN-UNC-86 protein [Caenorhabditis brenneri]
Length = 360
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/168 (72%), Positives = 140/168 (83%), Gaps = 3/168 (1%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
+P+ PP + +TDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQS
Sbjct: 150 RYPIAPPT---SELETDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQS 206
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAA
Sbjct: 207 TICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAA 266
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
PEKR LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 267 PEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 314
>gi|308501881|ref|XP_003113125.1| CRE-UNC-86 protein [Caenorhabditis remanei]
gi|308265426|gb|EFP09379.1| CRE-UNC-86 protein [Caenorhabditis remanei]
Length = 346
Score = 257 bits (657), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 135/226 (59%), Positives = 159/226 (70%), Gaps = 15/226 (6%)
Query: 161 SSSMTTLTPMSDPTPNPHQLHSSSMYG--PSMNSMMTGHHHHHHHSGALPASHHHGATHH 218
+SS +TP+ Q+ + YG P M+ H H S T +
Sbjct: 87 TSSEDQMTPL-------QQVMAMQTYGAPPQFQYNMS---HMTQHFTTSSISSSSNITRY 136
Query: 219 PVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
P+ PP + +TDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQSTI
Sbjct: 137 PIAPPT---SELETDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTI 193
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
CRFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAAPE
Sbjct: 194 CRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAAPE 253
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
KR LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 254 KRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 299
>gi|256072096|ref|XP_002572373.1| pou4/brn-3 [Schistosoma mansoni]
gi|353231860|emb|CCD79215.1| putative pou4/brn-3 [Schistosoma mansoni]
Length = 695
Score = 255 bits (651), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/208 (62%), Positives = 158/208 (75%), Gaps = 11/208 (5%)
Query: 183 SSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATH-HPVMPPGLQHPDTDTDPRELEAFA 241
+S + +NS + HS +L +H + + + HPV + D +PRELEAF+
Sbjct: 487 TSNFKTRLNSTSGYASQNFTHSTSLGCNHSNSSIYRHPV--------ELDYNPRELEAFS 538
Query: 242 ERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAW 301
E FKQRRIKLGVTQADVGKAL NLK+ GVG+LSQSTICRFESLTLSHNNM+ALKP+LQAW
Sbjct: 539 ELFKQRRIKLGVTQADVGKALGNLKISGVGSLSQSTICRFESLTLSHNNMVALKPVLQAW 598
Query: 302 LEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 361
LEEAEA+A ++ P+ + E++RKRTSI EKRSLEA+F++QPRPS EKIA IA
Sbjct: 599 LEEAEAEASSRLNHPNIYDL--DEERRRKRTSITDSEKRSLEAFFSIQPRPSSEKIAQIA 656
Query: 362 EKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
EKL+LKKNVVRVWFCNQRQKQKRMKF+
Sbjct: 657 EKLNLKKNVVRVWFCNQRQKQKRMKFST 684
>gi|363729168|ref|XP_003640606.1| PREDICTED: POU domain, class 4, transcription factor 1-like [Gallus
gallus]
Length = 487
Score = 253 bits (647), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/145 (84%), Positives = 129/145 (88%), Gaps = 3/145 (2%)
Query: 247 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 306
RRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 346 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 405
Query: 307 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 366
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 406 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 462
Query: 367 KKNVVRVWFCNQRQKQKRMKFAAQH 391
KKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 463 KKNVVRVWFCNQRQKQKRMKFSATY 487
>gi|156401033|ref|XP_001639096.1| predicted protein [Nematostella vectensis]
gi|156226222|gb|EDO47033.1| predicted protein [Nematostella vectensis]
Length = 156
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/157 (77%), Positives = 136/157 (86%), Gaps = 3/157 (1%)
Query: 233 DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
+PRELE FAERFKQRRIKLGVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNM+
Sbjct: 2 NPRELEWFAERFKQRRIKLGVTQADVGSALAHLKIPGVGSLSQSTICRFESLTLSHNNMM 61
Query: 293 ALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 352
ALKP+L AWLEEAE K K+ + + LP +KKRKRTSI A EKRSLEAYFA+ PRP
Sbjct: 62 ALKPVLTAWLEEAEKAYKTKQCN---SAFLPNSDKKRKRTSIGAAEKRSLEAYFAMNPRP 118
Query: 353 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
S +KIA+IAEKLDL KNVVRVWFCNQRQK+KRMKF+
Sbjct: 119 SSDKIASIAEKLDLSKNVVRVWFCNQRQKKKRMKFSV 155
>gi|358340300|dbj|GAA34699.2| POU domain class 4 transcription factor 2 [Clonorchis sinensis]
Length = 835
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 140/219 (63%), Positives = 160/219 (73%), Gaps = 20/219 (9%)
Query: 173 PTPNPHQL---HSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPD 229
P PNPHQ + + +G S N + G H S + V P Q +
Sbjct: 622 PQPNPHQTPVATTRTCFG-STNMLSVGAGQFAHRS-----------MNSLVQP---QPIE 666
Query: 230 TDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
TD +PR+LEAF+ERFKQRRIKLGVTQADVGKAL NLK+ GVG+LSQSTICRFESLTLSHN
Sbjct: 667 TDYNPRDLEAFSERFKQRRIKLGVTQADVGKALGNLKIAGVGSLSQSTICRFESLTLSHN 726
Query: 290 NMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQ 349
NM+ALKP+LQAWLEEAEA+A K R P+ EK+RKRTSI EKRSLEA+F+VQ
Sbjct: 727 NMVALKPVLQAWLEEAEAEAAEKLRHPEIYDA--EEEKRRKRTSITDSEKRSLEAFFSVQ 784
Query: 350 PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFA 388
PRPS EKIA IAEKL+LKKNVVRVWFCNQRQKQKRMKF+
Sbjct: 785 PRPSSEKIAQIAEKLNLKKNVVRVWFCNQRQKQKRMKFS 823
>gi|348020103|gb|AEP43993.1| POU domain class 4 transcription factor 1 [Craspedacusta sowerbyi]
Length = 321
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/162 (74%), Positives = 137/162 (84%), Gaps = 4/162 (2%)
Query: 229 DTDTDPRELEAFAERFKQRRIKL-GVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
+T+ PRELE FAERFKQRRI+L G TQ DVG ALA+LKLPGVG+LSQSTICRFESLTLS
Sbjct: 162 ETECTPRELEWFAERFKQRRIRLLGYTQDDVGAALAHLKLPGVGSLSQSTICRFESLTLS 221
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
HNNM+ALKP+L AWL+EAE + K +D + LP +KKRKRTSI A EKRSLEAYFA
Sbjct: 222 HNNMMALKPVLSAWLDEAEGANRMKAKDS---AFLPNADKKRKRTSIGAAEKRSLEAYFA 278
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+QPRPS +KIAAIAEKLDL KNVVRVWFCNQRQK+KRMKF+
Sbjct: 279 MQPRPSSDKIAAIAEKLDLSKNVVRVWFCNQRQKKKRMKFSV 320
>gi|363733116|ref|XP_003641203.1| PREDICTED: POU domain, class 4, transcription factor 2, partial
[Gallus gallus]
Length = 142
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/143 (83%), Positives = 127/143 (88%), Gaps = 3/143 (2%)
Query: 247 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 306
RRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 1 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 60
Query: 307 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 366
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 61 ---KSHREKLAKPELFSGAEKKRKRTSIAAPEKRSLEAYFALQPRPSSEKIAAIAEKLDL 117
Query: 367 KKNVVRVWFCNQRQKQKRMKFAA 389
KKNVVRVWFCNQRQKQKRMK++A
Sbjct: 118 KKNVVRVWFCNQRQKQKRMKYSA 140
>gi|350589975|ref|XP_003482965.1| PREDICTED: POU domain, class 4, transcription factor 1-like [Sus
scrofa]
Length = 268
Score = 248 bits (632), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 119/142 (83%), Positives = 126/142 (88%), Gaps = 3/142 (2%)
Query: 250 KLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA 309
KLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 130 KLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQ 189
Query: 310 KNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 369
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKN
Sbjct: 190 REKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKN 246
Query: 370 VVRVWFCNQRQKQKRMKFAAQH 391
VVRVWFCNQRQKQKRMKF+A +
Sbjct: 247 VVRVWFCNQRQKQKRMKFSATY 268
>gi|284026530|gb|ADB66165.1| Brn-3-like protein [Aurelia sp. 1 NN-2010a]
Length = 277
Score = 247 bits (630), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/153 (78%), Positives = 130/153 (84%), Gaps = 3/153 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D + PRELE FAERFKQRRIKLGVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSH
Sbjct: 128 DVECTPRELEWFAERFKQRRIKLGVTQADVGSALAHLKLPGVGSLSQSTICRFESLTLSH 187
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNM+ALKP+L AWLEEAE + K D + LP +KKRKRTSI A EKRSLEAYFA+
Sbjct: 188 NNMMALKPVLLAWLEEAEKAHRMKSND---SAFLPNQDKKRKRTSIGAAEKRSLEAYFAM 244
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
QPRPS +KIAAIAEKLDL KNVVRVWFCNQRQK
Sbjct: 245 QPRPSSDKIAAIAEKLDLSKNVVRVWFCNQRQK 277
>gi|403279068|ref|XP_003931091.1| PREDICTED: POU domain, class 4, transcription factor 1 [Saimiri
boliviensis boliviensis]
Length = 236
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/141 (83%), Positives = 125/141 (88%), Gaps = 3/141 (2%)
Query: 251 LGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 310
LGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 99 LGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQR 158
Query: 311 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 370
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNV
Sbjct: 159 EKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNV 215
Query: 371 VRVWFCNQRQKQKRMKFAAQH 391
VRVWFCNQRQKQKRMKF+A +
Sbjct: 216 VRVWFCNQRQKQKRMKFSATY 236
>gi|195130217|ref|XP_002009549.1| GI15417 [Drosophila mojavensis]
gi|193907999|gb|EDW06866.1| GI15417 [Drosophila mojavensis]
Length = 180
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 140/189 (74%), Positives = 147/189 (77%), Gaps = 19/189 (10%)
Query: 151 MDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALP 208
MD L+MLD + SMTTL P+S+ TP LH S SMN MM+ HHH G L
Sbjct: 1 MDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH---SMNHMMS-----HHHPGTLS 51
Query: 209 ---ASHH-HGATHHPVMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK 260
A HH H A HHPV+ + HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK
Sbjct: 52 GHTAGHHGHSAVHHPVITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGK 111
Query: 261 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 320
ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS
Sbjct: 112 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 171
Query: 321 VLPAGEKKR 329
VLPAGEKKR
Sbjct: 172 VLPAGEKKR 180
>gi|395527481|ref|XP_003765873.1| PREDICTED: POU domain, class 4, transcription factor 1 [Sarcophilus
harrisii]
Length = 248
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/142 (83%), Positives = 126/142 (88%), Gaps = 3/142 (2%)
Query: 250 KLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA 309
+LGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 110 QLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQ 169
Query: 310 KNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 369
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKN
Sbjct: 170 REKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKN 226
Query: 370 VVRVWFCNQRQKQKRMKFAAQH 391
VVRVWFCNQRQKQKRMKF+A +
Sbjct: 227 VVRVWFCNQRQKQKRMKFSATY 248
>gi|426246977|ref|XP_004017263.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 2 [Ovis aries]
Length = 325
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/138 (83%), Positives = 122/138 (88%), Gaps = 3/138 (2%)
Query: 252 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 311
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 189 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 245
Query: 312 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 246 HREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 305
Query: 372 RVWFCNQRQKQKRMKFAA 389
RVWFCNQRQKQKRMK++A
Sbjct: 306 RVWFCNQRQKQKRMKYSA 323
>gi|16924186|gb|AAK26109.2|AF231943_1 class IV POU transcription factor [Haliotis asinina]
Length = 140
Score = 237 bits (604), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 124/137 (90%), Gaps = 3/137 (2%)
Query: 253 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 312
VTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE A+++
Sbjct: 1 VTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKAARDR 60
Query: 313 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 372
+ + + ++ +KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDLKKNVVR
Sbjct: 61 KAEGE---MMGGADKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDLKKNVVR 117
Query: 373 VWFCNQRQKQKRMKFAA 389
VWFCNQRQKQKRMKF+A
Sbjct: 118 VWFCNQRQKQKRMKFSA 134
>gi|195163858|ref|XP_002022766.1| GL14745 [Drosophila persimilis]
gi|194104789|gb|EDW26832.1| GL14745 [Drosophila persimilis]
Length = 168
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 128/174 (73%), Positives = 134/174 (77%), Gaps = 14/174 (8%)
Query: 164 MTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHP 219
MTTL P+S+P+ P H Y SMN MM+ HHH G L A HHP
Sbjct: 1 MTTLAPISEPSLTPTHQHLHGSYH-SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHP 54
Query: 220 VMPPGLQ----HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQ 275
V+ + HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQ
Sbjct: 55 VITAAVAAAGLHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQ 114
Query: 276 STICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 329
STICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR
Sbjct: 115 STICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 168
>gi|327267909|ref|XP_003218741.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1-like [Anolis carolinensis]
Length = 354
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 114/155 (73%), Positives = 128/155 (82%), Gaps = 3/155 (1%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
L+AFA+R K+R LGV Q D+ + ++K+ VG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 203 LDAFADRVKERPHNLGVIQDDLARRSPHIKIHRVGSLSQSTICRFESLTLSHNNMIALKP 262
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EK
Sbjct: 263 ILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEK 319
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 320 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 354
>gi|454293|gb|AAA31105.1| POU domain region; homolog of mouse brn-3, partial [Sus scrofa]
Length = 134
Score = 231 bits (588), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 111/137 (81%), Positives = 120/137 (87%), Gaps = 3/137 (2%)
Query: 244 FKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLE 303
FK RR+KLGVTQADVG ALA LK+PGVG+LSQSTICRFESLTLSHNNMIALKPIL+AWLE
Sbjct: 1 FKLRRMKLGVTQADVGSALAYLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILRAWLE 60
Query: 304 EAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 363
EAE + K + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEK
Sbjct: 61 EAEGAQREK---MNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEK 117
Query: 364 LDLKKNVVRVWFCNQRQ 380
LDLK+NVVRVWFCN+RQ
Sbjct: 118 LDLKRNVVRVWFCNRRQ 134
>gi|355701045|gb|EHH29066.1| Brain-specific homeobox/POU domain protein 3A, partial [Macaca
mulatta]
Length = 202
Score = 225 bits (573), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/129 (82%), Positives = 114/129 (88%), Gaps = 3/129 (2%)
Query: 263 ANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVL 322
ANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +R + P +
Sbjct: 77 ANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGA---QREKMNKPELF 133
Query: 323 PAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQ 382
GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQ
Sbjct: 134 NGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQ 193
Query: 383 KRMKFAAQH 391
KRMKF+A +
Sbjct: 194 KRMKFSATY 202
>gi|46397775|sp|P20266.2|PO4F1_RAT RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A
Length = 128
Score = 224 bits (572), Expect = 4e-56, Method: Composition-based stats.
Identities = 111/131 (84%), Positives = 116/131 (88%), Gaps = 3/131 (2%)
Query: 247 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 306
RRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 1 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 60
Query: 307 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 366
+ K + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 61 GAQREKM---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 117
Query: 367 KKNVVRVWFCN 377
KKNVVRVWFCN
Sbjct: 118 KKNVVRVWFCN 128
>gi|3355755|emb|CAA49382.1| transcription factor [Girardia tigrina]
Length = 285
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/148 (75%), Positives = 123/148 (83%), Gaps = 5/148 (3%)
Query: 225 LQHPDTDT---DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRF 281
L HP D DPRELE F+ERFKQRRIKLGVTQADVGKAL NLKL GVG+LSQSTICRF
Sbjct: 140 LPHPIQDQLNYDPRELEIFSERFKQRRIKLGVTQADVGKALGNLKLSGVGSLSQSTICRF 199
Query: 282 ESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRS 341
ESLTLSHNNM+ALKPILQAWLEEAE QA + ++PD + + ++KRKRTSI EKRS
Sbjct: 200 ESLTLSHNNMVALKPILQAWLEEAERQAAERLKNPDIYN--DSLDRKRKRTSITDAEKRS 257
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKN 369
LEAYFAVQPRPS EKIA IA+KL+LKKN
Sbjct: 258 LEAYFAVQPRPSSEKIAQIADKLNLKKN 285
>gi|410947572|ref|XP_003980518.1| PREDICTED: POU domain, class 4, transcription factor 1 [Felis
catus]
Length = 257
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/127 (82%), Positives = 112/127 (88%), Gaps = 3/127 (2%)
Query: 265 LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA 324
LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K P+ +
Sbjct: 134 LKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPE---LFNG 190
Query: 325 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR
Sbjct: 191 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 250
Query: 385 MKFAAQH 391
MKF+A +
Sbjct: 251 MKFSATY 257
>gi|297274894|ref|XP_002800899.1| PREDICTED: POU domain, class 4, transcription factor 1-like,
partial [Macaca mulatta]
Length = 124
Score = 213 bits (543), Expect = 1e-52, Method: Composition-based stats.
Identities = 105/127 (82%), Positives = 112/127 (88%), Gaps = 3/127 (2%)
Query: 265 LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA 324
LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K + P +
Sbjct: 1 LKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKM---NKPELFNG 57
Query: 325 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKR
Sbjct: 58 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 117
Query: 385 MKFAAQH 391
MKF+A +
Sbjct: 118 MKFSATY 124
>gi|449498733|ref|XP_004177291.1| PREDICTED: LOW QUALITY PROTEIN: brain-specific homeobox/POU domain
protein 3-like [Taeniopygia guttata]
Length = 311
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 123/217 (56%), Positives = 147/217 (67%), Gaps = 25/217 (11%)
Query: 149 HGMDGLEMLDSISSSMT---TLTPMSDPTPN-PHQLHSSSMYGPSMNSMMTGHHHHHHHS 204
G+DG E+LD ++S++ P TP+ PH S M+ +H HHS
Sbjct: 116 QGLDG-ELLDHLNSALPLGGVPGPEVGSTPSHPH-------------SHMSAINHMAHHS 161
Query: 205 GALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALAN 264
+ SH HG H V + P+T+TDPRELE+FAERFKQRRIKLGVTQADVG ALAN
Sbjct: 162 QPMNMSHPHGLASHAV----ISGPETETDPRELESFAERFKQRRIKLGVTQADVGSALAN 217
Query: 265 LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA 324
LK+PGVG L+QSTICRFESLTLSHNNM+ALKPIL+AWLEEA+ + +R P +
Sbjct: 218 LKIPGVGCLNQSTICRFESLTLSHNNMVALKPILEAWLEEAD---RAQREKMTIPEIYTG 274
Query: 325 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 361
G+KKRKRTSIAAP+KRSLEAYF RPS EK AIA
Sbjct: 275 GDKKRKRTSIAAPKKRSLEAYFPRPARPSXEKTPAIA 311
>gi|410932861|ref|XP_003979811.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Takifugu rubripes]
Length = 162
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 100/125 (80%), Positives = 108/125 (86%), Gaps = 3/125 (2%)
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE 326
+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE + K P+ + +
Sbjct: 41 IPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERVQREKMAKPE---IFNGAD 97
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK
Sbjct: 98 KKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 157
Query: 387 FAAQH 391
F+A H
Sbjct: 158 FSATH 162
>gi|22023894|gb|AAM89246.1|AF526420_1 class IV POU-domain transcription factor Brn-3.1 [Serinus canaria]
Length = 239
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 125/186 (67%), Gaps = 44/186 (23%)
Query: 177 PHQLHS-SSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPR 235
PH L S + + GP +T+TDPR
Sbjct: 97 PHGLASHAVISGP----------------------------------------ETETDPR 116
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE+FAERFKQRRIKLGVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALK
Sbjct: 117 ELESFAERFKQRRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALK 176
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
PIL+AWLEEAE + K P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS E
Sbjct: 177 PILEAWLEEAERAQREKMTKPE---IYTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSE 233
Query: 356 KIAAIA 361
KIAAIA
Sbjct: 234 KIAAIA 239
>gi|196005025|ref|XP_002112379.1| class IV POU transcription factor gene brn-3c product [Trichoplax
adhaerens]
gi|190584420|gb|EDV24489.1| class IV POU transcription factor gene brn-3c product, partial
[Trichoplax adhaerens]
Length = 154
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/149 (68%), Positives = 119/149 (79%), Gaps = 2/149 (1%)
Query: 226 QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
Q D + + LE FAE FKQRR KLGVTQADVG AL NLK+ GVG LSQSTICRFESLT
Sbjct: 6 QQSDIENERLGLELFAENFKQRRTKLGVTQADVGAALGNLKIAGVGCLSQSTICRFESLT 65
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAP-SVLPA-GEKKRKRTSIAAPEKRSLE 343
LSHNNM+ALKP+L AWLE+AE K+K+ + +++P +KKRKRTSIAA EKR+LE
Sbjct: 66 LSHNNMMALKPVLAAWLEKAEEVYKSKQMSGNCDNTIIPQRSDKKRKRTSIAAMEKRALE 125
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVR 372
AYFA++PRPS EKIA IAEKLDL+KNVVR
Sbjct: 126 AYFAIEPRPSSEKIAIIAEKLDLQKNVVR 154
>gi|307188514|gb|EFN73251.1| Inhibitory POU protein [Camponotus floridanus]
Length = 101
Score = 204 bits (518), Expect = 9e-50, Method: Composition-based stats.
Identities = 101/101 (100%), Positives = 101/101 (100%)
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 1 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 60
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 61 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 101
>gi|22023892|gb|AAM89245.1|AF526419_1 class IV POU-domain transcription factor Brn-3.2 [Gallus gallus]
Length = 244
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/122 (81%), Positives = 105/122 (86%), Gaps = 3/122 (2%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D D DPR+LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 115 DVDADPRDLEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 174
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+
Sbjct: 175 NNMIALKPILQAWLEEAE---KSHREKLAKPELFSGAEKKRKRTSIAAPEKRSLEAYFAL 231
Query: 349 QP 350
QP
Sbjct: 232 QP 233
>gi|297481206|ref|XP_002691957.1| PREDICTED: POU domain, class 4, transcription factor 1 [Bos taurus]
gi|296481697|tpg|DAA23812.1| TPA: POU domain, class 4, transcription factor 1-like [Bos taurus]
Length = 126
Score = 199 bits (505), Expect = 2e-48, Method: Composition-based stats.
Identities = 98/121 (80%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
Query: 271 GALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRK 330
G QSTICRFESLTLSHNNMIALKPILQAWLEEAE + K + P + GEKKRK
Sbjct: 9 GGSDQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKM---NKPELFNGGEKKRK 65
Query: 331 RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQ 390
RTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A
Sbjct: 66 RTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSAT 125
Query: 391 H 391
+
Sbjct: 126 Y 126
>gi|358337775|dbj|GAA34402.2| POU domain transcription factor class 4 [Clonorchis sinensis]
Length = 460
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 120/163 (73%), Gaps = 13/163 (7%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
EL+AFA +FKQRR+KLGVTQA+VG+AL L++ G G LSQSTICRFESLTLSHNNM+ LK
Sbjct: 280 ELKAFASKFKQRRMKLGVTQAEVGRALGCLQIGGFGCLSQSTICRFESLTLSHNNMLVLK 339
Query: 296 PILQAWLEEAEAQAKNKR------RDPDAPSVLPAGE-------KKRKRTSIAAPEKRSL 342
PIL+ WL+ E + + ++ +D S + E ++R+RTSI PEK L
Sbjct: 340 PILEEWLDIVEREHEQRQLTRTIGQDDIVESEYYSEEMRFYGTDRRRRRTSITDPEKHLL 399
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
EAYF QP+PS +++A IA+++ L+KNVVRVWFCNQRQKQKR+
Sbjct: 400 EAYFQTQPKPSTDELALIADRIKLRKNVVRVWFCNQRQKQKRL 442
>gi|349584659|dbj|BAL03082.1| abnormal chemosensory jump 6, isoform F [Bombyx mori]
Length = 146
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/92 (98%), Positives = 91/92 (98%)
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 359
AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI A
Sbjct: 55 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITA 114
Query: 360 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH
Sbjct: 115 IAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 146
>gi|2495299|sp|P55968.1|PO4F1_CHICK RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A
gi|543468|pir||S40959 transcription factor Brn-3A - rat (fragment)
gi|930136|emb|CAA36218.1| Brn-3 POU-box protein (116 AA) [Mus musculus]
gi|1684822|gb|AAD03154.1| POU domain factor [Gallus gallus]
Length = 116
Score = 190 bits (482), Expect = 1e-45, Method: Composition-based stats.
Identities = 99/119 (83%), Positives = 104/119 (87%), Gaps = 3/119 (2%)
Query: 253 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 312
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREK 60
Query: 313 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
+ P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 61 M---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 116
>gi|508494|gb|AAA36393.1| POU domain protein, partial [Homo sapiens]
Length = 118
Score = 189 bits (479), Expect = 3e-45, Method: Composition-based stats.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 253 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 312
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSH 57
Query: 313 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 372
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 58 REKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVR 117
Query: 373 V 373
V
Sbjct: 118 V 118
>gi|1323762|gb|AAB00435.1| Brn-3.1 POU domain, partial [Danio rerio]
Length = 116
Score = 187 bits (476), Expect = 6e-45, Method: Composition-based stats.
Identities = 96/119 (80%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Query: 253 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 312
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREK 60
Query: 313 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIA IAEKLDLKKNVV
Sbjct: 61 NGKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIARIAEKLDLKKNVV 116
>gi|312093845|ref|XP_003147825.1| hypothetical protein LOAG_12263 [Loa loa]
Length = 240
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 91/116 (78%), Positives = 99/116 (85%)
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNN
Sbjct: 124 DTDPRELERFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNN 183
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
M+ALKPIL +WLE+AE K K DA +LP +KKRKRTSIAAPEKR LE YF
Sbjct: 184 MVALKPILHSWLEKAEEVTKTKDIAGDAQGILPNMDKKRKRTSIAAPEKRLLEDYF 239
>gi|22023900|gb|AAM89249.1|AF526423_1 class IV POU-domain transcription factor Brn-3.2 [Serinus canaria]
Length = 111
Score = 186 bits (471), Expect = 2e-44, Method: Composition-based stats.
Identities = 95/114 (83%), Positives = 98/114 (85%), Gaps = 3/114 (2%)
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P + EKKRKRT
Sbjct: 1 FSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLAKPELFSGAEKKRKRT 57
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
SIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK
Sbjct: 58 SIAAPEKRSLEAYFALQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 111
>gi|543469|pir||S40960 transcription factor Brn-3B - rat (fragment)
gi|258576|gb|AAB23880.1| Brn-3B=POU family transcription factor [rats, neuronal cell line
ND7, Peptide Partial, 116 aa]
Length = 116
Score = 184 bits (467), Expect = 7e-44, Method: Composition-based stats.
Identities = 98/119 (82%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Query: 253 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 312
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSH 57
Query: 313 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 58 REKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 116
>gi|440808044|gb|AGC24165.1| Brn3, partial [Aplysia californica]
Length = 111
Score = 179 bits (454), Expect = 2e-42, Method: Composition-based stats.
Identities = 91/114 (79%), Positives = 99/114 (86%), Gaps = 3/114 (2%)
Query: 259 GKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA 318
G ALANLK+PGVG LSQSTICRFESLTLSHNNMIALKPILQ WLE+AE QA+ ++ + +
Sbjct: 1 GAALANLKIPGVGCLSQSTICRFESLTLSHNNMIALKPILQTWLEDAEKQARERKAELEN 60
Query: 319 PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 372
G+KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDLKKNVVR
Sbjct: 61 GL---GGDKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIARIAEKLDLKKNVVR 111
>gi|440808042|gb|AGC24164.1| Brn3, partial [Lymnaea stagnalis]
Length = 111
Score = 178 bits (452), Expect = 3e-42, Method: Composition-based stats.
Identities = 91/114 (79%), Positives = 99/114 (86%), Gaps = 3/114 (2%)
Query: 259 GKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA 318
G ALANLK+PGVG LSQSTICRFESLTLSHNNMIALKPILQ WLE+AE QA+ ++ + +
Sbjct: 1 GAALANLKIPGVGCLSQSTICRFESLTLSHNNMIALKPILQTWLEDAEKQARERKAELEN 60
Query: 319 PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 372
G+KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDLKKNVVR
Sbjct: 61 GL---NGDKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDLKKNVVR 111
>gi|12024867|gb|AAG45671.1|AF153701_1 class IV POU domain protein 1 [Lumbricus terrestris]
Length = 113
Score = 169 bits (429), Expect = 2e-39, Method: Composition-based stats.
Identities = 86/112 (76%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
Query: 261 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAKNKRRDPDAP 319
AL LK+PGVG+LSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE ++ +N+ R+
Sbjct: 2 ALGKLKIPGVGSLSQSTICRFESLTLSHNNMVALKPVLQAWLEEAEKSRMENRLRNELFN 61
Query: 320 SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
P G+KKRKRTSIAAPEKRSLEAYFA+QPRPSGEKIA IA+KLDLKKNVV
Sbjct: 62 GTGPGGDKKRKRTSIAAPEKRSLEAYFAIQPRPSGEKIAQIADKLDLKKNVV 113
>gi|242025066|ref|XP_002432947.1| POU-domain protein CF1A, putative [Pediculus humanus corporis]
gi|212518456|gb|EEB20209.1| POU-domain protein CF1A, putative [Pediculus humanus corporis]
Length = 301
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 130/212 (61%), Gaps = 19/212 (8%)
Query: 183 SSMYGPSMNSMMTGHHH---HHHHSGALPASHHHGATHHPVMP-----PGLQHPDTDTDP 234
S+ Y +MN M+ HH HHS +H A HH + P G + P + D
Sbjct: 42 STAYHAAMNGMLAHHHQTSPQLHHSLRDMQNHSPSALHHGLDPRNDPSGGEEDPQSSED- 100
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM L
Sbjct: 101 --LELFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKL 155
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
KP+LQ WLEEA++ + P + + A G K++KRTSI K +LE +F QP+PS
Sbjct: 156 KPLLQKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFLKQPKPS 211
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++IA++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 212 AQEIASLADGLQLEKEVVRVWFCNRRQKEKRM 243
>gi|225543476|ref|NP_001139385.1| ventral vein lacking [Tribolium castaneum]
gi|270008227|gb|EFA04675.1| ventral veins lacking [Tribolium castaneum]
Length = 400
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 125/213 (58%), Gaps = 32/213 (15%)
Query: 186 YGPSMNSMMTGHHHHHHHSGALPASHH-----HGATHHPVMPPGLQHPDTDTDPRE---- 236
Y +MN M+ HH GA P HH + HHP QH D D E
Sbjct: 148 YHAAMNGMLA------HHQGA-PQLHHPLHRDMQSPHHP------QHSDRDVSGGEDETP 194
Query: 237 ----LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM
Sbjct: 195 TSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMC 251
Query: 293 ALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 352
LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+P
Sbjct: 252 KLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKP 308
Query: 353 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
S ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 309 SAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 341
>gi|371786481|emb|CBY77549.1| POU-IV, partial [Pecten maximus]
Length = 205
Score = 166 bits (421), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/86 (90%), Positives = 81/86 (94%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT+ DPRELEAFAERFKQRRIKLGVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSH
Sbjct: 111 DTECDPRELEAFAERFKQRRIKLGVTQADVGNALANLKLPGVGSLSQSTICRFESLTLSH 170
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRR 314
NNMIALKPILQAWLEEAE QA+ KR
Sbjct: 171 NNMIALKPILQAWLEEAEEQAREKRE 196
>gi|195338005|ref|XP_002035616.1| GM14797 [Drosophila sechellia]
gi|194128709|gb|EDW50752.1| GM14797 [Drosophila sechellia]
Length = 617
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 213 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 268
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 269 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 325
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 326 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
>gi|195126010|ref|XP_002007467.1| GI12964 [Drosophila mojavensis]
gi|193919076|gb|EDW17943.1| GI12964 [Drosophila mojavensis]
Length = 716
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 230 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 285
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 286 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 342
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 343 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 379
>gi|149050149|gb|EDM02473.1| rCG37080 [Rattus norvegicus]
Length = 98
Score = 166 bits (420), Expect = 2e-38, Method: Composition-based stats.
Identities = 81/101 (80%), Positives = 86/101 (85%), Gaps = 3/101 (2%)
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAE + K + P + GEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 1 MIALKPILQAWLEEAEGAQREKM---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQP 57
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
RPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 58 RPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 98
>gi|321460582|gb|EFX71623.1| putative POU transcription factor [Daphnia pulex]
Length = 506
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 108/160 (67%), Gaps = 8/160 (5%)
Query: 228 PDTDTDPR--ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
P + +P +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 252 PSEEENPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 308
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +
Sbjct: 309 LSFKNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQH 365
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F QP+PS ++IA++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 366 FHKQPKPSAQEIASLADSLQLEKEVVRVWFCNRRQKEKRM 405
>gi|198463489|ref|XP_001352840.2| GA10024 [Drosophila pseudoobscura pseudoobscura]
gi|198151278|gb|EAL30341.2| GA10024 [Drosophila pseudoobscura pseudoobscura]
Length = 729
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 227 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 282
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 283 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 339
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 340 QPKPSAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 376
>gi|328705527|ref|XP_003242837.1| PREDICTED: POU domain protein CF1A-like [Acyrthosiphon pisum]
Length = 439
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 121/200 (60%), Gaps = 20/200 (10%)
Query: 190 MNSMMTGHHH----HHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFK 245
MN M+ GH H H HS + P H P P G + T D LEAFA++FK
Sbjct: 183 MNGML-GHTHPAVQMHGHSPSYPQQHD------PQSPGGEEDAPTSDD---LEAFAKQFK 232
Query: 246 QRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEA 305
QRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA
Sbjct: 233 QRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEA 289
Query: 306 EAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 365
++ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 290 DSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 346
Query: 366 LKKNVVRVWFCNQRQKQKRM 385
L+K VVRVWFCN+RQK+KRM
Sbjct: 347 LEKEVVRVWFCNRRQKEKRM 366
>gi|442630618|ref|NP_001163355.2| ventral veins lacking, isoform C [Drosophila melanogaster]
gi|440215385|gb|ACZ94626.2| ventral veins lacking, isoform C [Drosophila melanogaster]
Length = 713
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 213 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 268
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 269 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 325
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 326 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
>gi|195492366|ref|XP_002093959.1| GE21576 [Drosophila yakuba]
gi|194180060|gb|EDW93671.1| GE21576 [Drosophila yakuba]
Length = 690
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 213 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 268
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 269 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 325
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 326 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
>gi|194865646|ref|XP_001971533.1| GG14388 [Drosophila erecta]
gi|190653316|gb|EDV50559.1| GG14388 [Drosophila erecta]
Length = 690
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 213 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 268
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 269 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 325
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 326 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
>gi|195439744|ref|XP_002067719.1| GK12556 [Drosophila willistoni]
gi|194163804|gb|EDW78705.1| GK12556 [Drosophila willistoni]
Length = 729
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/158 (53%), Positives = 110/158 (69%), Gaps = 9/158 (5%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 234 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 289
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFA 347
NM LKP+LQ WLEEA++ + P + + A G K++KRTSI K +LE +F
Sbjct: 290 KNMCKLKPLLQKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFH 345
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 346 KQPKPSAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 383
>gi|322784933|gb|EFZ11704.1| hypothetical protein SINV_04369 [Solenopsis invicta]
Length = 452
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 242 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 297
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 298 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 354
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 355 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 391
>gi|17737539|ref|NP_523948.1| ventral veins lacking, isoform A [Drosophila melanogaster]
gi|27735164|sp|P16241.5|CF1A_DROME RecName: Full=POU domain protein CF1A; AltName: Full=Chorion factor
1A; Short=CF1-A; AltName: Full=Protein drifter; AltName:
Full=Ventral veins lacking protein
gi|158154|gb|AAA28831.1| POU domain protein [Drosophila melanogaster]
gi|23094063|gb|AAF50641.3| ventral veins lacking, isoform A [Drosophila melanogaster]
gi|157816296|gb|ABV82142.1| FI01008p [Drosophila melanogaster]
Length = 427
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 219 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 275
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 276 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 332
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 333 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
>gi|195588294|ref|XP_002083893.1| GD13969 [Drosophila simulans]
gi|194195902|gb|EDX09478.1| GD13969 [Drosophila simulans]
Length = 759
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 287 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 342
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 343 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 399
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 400 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 436
>gi|332022106|gb|EGI62428.1| POU domain protein CF1A [Acromyrmex echinatior]
Length = 451
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 241 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 296
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 297 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 353
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 354 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 390
>gi|28317002|gb|AAO39521.1| RE27192p [Drosophila melanogaster]
Length = 427
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 213 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 268
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 269 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 325
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 326 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
>gi|307203991|gb|EFN82895.1| POU domain protein CF1A [Harpegnathos saltator]
Length = 454
Score = 164 bits (416), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 244 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 299
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 300 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 356
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 357 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 393
>gi|224459192|gb|ACN43331.1| ventral vein lacking [Tribolium castaneum]
Length = 400
Score = 164 bits (416), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 124/213 (58%), Gaps = 32/213 (15%)
Query: 186 YGPSMNSMMTGHHHHHHHSGALPASHH-----HGATHHPVMPPGLQHPDTDTDPRE---- 236
Y +MN M+ HH GA P HH + HHP QH D D E
Sbjct: 148 YHAAMNGMLA------HHQGA-PQLHHPLHRDMQSPHHP------QHSDRDVSGGEDETH 194
Query: 237 ----LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM
Sbjct: 195 TSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMC 251
Query: 293 ALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 352
LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F Q +P
Sbjct: 252 KLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSGKGALEQHFHKQAKP 308
Query: 353 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
S ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 309 SAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 341
>gi|195013239|ref|XP_001983819.1| GH15364 [Drosophila grimshawi]
gi|193897301|gb|EDV96167.1| GH15364 [Drosophila grimshawi]
Length = 442
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 238 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 294
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 295 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 351
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 352 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 381
>gi|307182763|gb|EFN69886.1| POU domain protein CF1A [Camponotus floridanus]
Length = 451
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 241 DTPTS-DDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 296
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 297 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 353
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 354 QPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 390
>gi|195376119|ref|XP_002046844.1| GJ13109 [Drosophila virilis]
gi|194154002|gb|EDW69186.1| GJ13109 [Drosophila virilis]
Length = 441
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 237 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 293
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 294 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 350
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 351 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 380
>gi|157137091|ref|XP_001663883.1| pou domain/drifter/cf-1a [Aedes aegypti]
gi|108880926|gb|EAT45151.1| AAEL003560-PA [Aedes aegypti]
Length = 408
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 200 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 256
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 257 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 313
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 314 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 343
>gi|405966406|gb|EKC31695.1| POU domain, class 3, transcription factor 4 [Crassostrea gigas]
Length = 413
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 112/176 (63%), Gaps = 17/176 (9%)
Query: 221 MPPGLQHPDTDTD-----------PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPG 269
+P ++ PD D D +LEAFA++FKQRRIKLG TQADVG AL L
Sbjct: 156 LPHAMRDPDHDLDQHTPSDDDAPSSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY--- 212
Query: 270 VGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 329
SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + + G K++
Sbjct: 213 GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSTT---SIDKIAAQGRKRK 269
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE +F QP+P+ ++I+ +AE+L L+K VVRVWFCN+RQK+KRM
Sbjct: 270 KRTSIEVTVKGALENHFMKQPKPAAQEISQLAEQLQLEKEVVRVWFCNRRQKEKRM 325
>gi|238625261|gb|ACR47965.1| POU HOMEO protein [Artemia sinica]
Length = 388
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 122/203 (60%), Gaps = 16/203 (7%)
Query: 189 SMNSMMTG--HHHHHHHSGAL---PASHHHGATHHPVMPPGLQHPDTDTDPRE-LEAFAE 242
SMN + G HH H +L P+ + HG H GL P+ + E LE FA+
Sbjct: 126 SMNGIFGGPQLHHQSHLRDSLNGTPSPNDHGMLDHD----GLHDPEEENPTSEDLEGFAK 181
Query: 243 RFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 302
+FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WL
Sbjct: 182 QFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWL 238
Query: 303 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 362
EEA++ + + G K++KRTSI K +LE +F Q +PS ++I A+A+
Sbjct: 239 EEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQSKPSAQEITALAD 295
Query: 363 KLDLKKNVVRVWFCNQRQKQKRM 385
L L+K VVRVWFCN+RQK+KRM
Sbjct: 296 SLQLEKEVVRVWFCNRRQKEKRM 318
>gi|66517328|ref|XP_393686.2| PREDICTED: POU domain protein CF1A-like [Apis mellifera]
gi|380017793|ref|XP_003692829.1| PREDICTED: POU domain protein CF1A-like [Apis florea]
Length = 460
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA +FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 250 DTPTS-DDLEAFARQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 305
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 306 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 362
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 363 QPKPSAQEITTLADSLQLEKEVVRVWFCNRRQKEKRM 399
>gi|170032039|ref|XP_001843890.1| pou domain/drifter/cf-1a [Culex quinquefasciatus]
gi|167871839|gb|EDS35222.1| pou domain/drifter/cf-1a [Culex quinquefasciatus]
Length = 421
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 213 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 269
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 270 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 326
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 327 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 356
>gi|357611143|gb|EHJ67329.1| silk gland factor 3 [Danaus plexippus]
Length = 361
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 107/159 (67%), Gaps = 7/159 (4%)
Query: 228 PDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
P+ DT +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L L
Sbjct: 141 PEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQL 197
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
S NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 198 SFKNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHF 254
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 255 HKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 293
>gi|170070202|ref|XP_001869499.1| POU domain protein CF1A [Culex quinquefasciatus]
gi|167866092|gb|EDS29475.1| POU domain protein CF1A [Culex quinquefasciatus]
Length = 408
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 200 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 256
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 257 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 313
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 314 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 343
>gi|383863245|ref|XP_003707092.1| PREDICTED: POU domain protein CF1A-like [Megachile rotundata]
Length = 315
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 105/151 (69%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 111 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 167
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+LQ WLEEA++ + P + + A G K++KRTSI K +LE +F QP+PS
Sbjct: 168 PLLQKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSA 223
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 224 QEITTLADSLQLEKEVVRVWFCNRRQKEKRM 254
>gi|156362127|ref|XP_001625632.1| predicted protein [Nematostella vectensis]
gi|156212475|gb|EDO33532.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 115/188 (61%), Gaps = 15/188 (7%)
Query: 207 LPAS---HHHGATHHP-VMPPGLQHPDTDTDPR-----ELEAFAERFKQRRIKLGVTQAD 257
LPAS ++ +P V P LQH D D +LE FA++FKQRRIKLG TQAD
Sbjct: 3 LPASFAPNNQTIRENPGVQDPQLQHDILDADDDTPTSDDLEQFAKQFKQRRIKLGFTQAD 62
Query: 258 VGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD 317
VG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+ N
Sbjct: 63 VGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD---NNNGATGG 116
Query: 318 APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCN 377
+ G K++KRTSI K +LE +F P+P+ ++I+A+AE L L K VVRVWFCN
Sbjct: 117 VDKLATTGRKRKKRTSIEVAVKGALENHFCKSPKPTAQEISALAENLGLDKEVVRVWFCN 176
Query: 378 QRQKQKRM 385
+RQK+KRM
Sbjct: 177 RRQKEKRM 184
>gi|347965218|ref|XP_315904.5| AGAP005878-PA [Anopheles gambiae str. PEST]
gi|333469386|gb|EAA11065.5| AGAP005878-PA [Anopheles gambiae str. PEST]
Length = 498
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 283 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 339
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 340 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 396
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+ +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 397 EISTLADSLQLEKEVVRVWFCNRRQKEKRM 426
>gi|7716|emb|CAA36496.1| CF1a protein (C-term.) [Drosophila melanogaster]
gi|226748|prf||1604414A POU domain protein
Length = 343
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 113/176 (64%), Gaps = 11/176 (6%)
Query: 211 HHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGV 270
HH G + G + T D LEAFA++FKQRRIKLG TQADVG AL L
Sbjct: 114 HHMGGGDRDAISGGEEDTPTSDD---LEAFAKQFKQRRIKLGFTQADVGLALGTLY---G 167
Query: 271 GALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKR 329
SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + P + + A G K++
Sbjct: 168 NVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS----PTSIDKIAAQGRKRK 223
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE +F QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 224 KRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 279
>gi|340719390|ref|XP_003398137.1| PREDICTED: POU domain protein CF1A-like [Bombus terrestris]
Length = 487
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT T +LEAFA +FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 249 DTPTS-DDLEAFARQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSF 304
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 305 KNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHK 361
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 362 QPKPSAQEITTLADNLQLEKEVVRVWFCNRRQKEKRM 398
>gi|7718|emb|CAA41341.1| Pou-domain protein [Drosophila melanogaster]
Length = 549
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 113/176 (64%), Gaps = 11/176 (6%)
Query: 211 HHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGV 270
HH G + G + T D LEAFA++FKQRRIKLG TQADVG AL L
Sbjct: 236 HHMGGGDRDAISGGEEDTPTSDD---LEAFAKQFKQRRIKLGFTQADVGLALGTLY---G 289
Query: 271 GALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKR 329
SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + P + + A G K++
Sbjct: 290 NVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS----PTSIDKIAAQGRKRK 345
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE +F QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 346 KRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 401
>gi|227714|prf||1709357B Cf1-a protein
Length = 549
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 113/176 (64%), Gaps = 11/176 (6%)
Query: 211 HHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGV 270
HH G + G + T D LEAFA++FKQRRIKLG TQADVG AL L
Sbjct: 236 HHMGGGDRDAISGGEEDTPTSDD---LEAFAKQFKQRRIKLGFTQADVGLALGTLY---G 289
Query: 271 GALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKR 329
SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + P + + A G K++
Sbjct: 290 NVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS----PTSIDKIAAQGRKRK 345
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE +F QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 346 KRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 401
>gi|312378396|gb|EFR24983.1| hypothetical protein AND_10077 [Anopheles darlingi]
Length = 866
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 104/150 (69%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 648 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 704
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 705 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 761
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 762 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 791
>gi|164420677|ref|NP_001037456.2| silk gland factor 3 [Bombyx mori]
gi|33088056|gb|AAP93140.1| POU-M2 [Bombyx mori]
Length = 352
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 107/159 (67%), Gaps = 7/159 (4%)
Query: 228 PDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
P+ DT +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L L
Sbjct: 148 PEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQL 204
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
S NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 205 SFKNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHF 261
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 262 HKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 300
>gi|40950582|gb|AAR97922.1| POU-domain transcription factor [Helicoverpa armigera]
Length = 351
Score = 162 bits (410), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 87/176 (49%), Positives = 111/176 (63%), Gaps = 15/176 (8%)
Query: 211 HHHGATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPG 269
HHH P P+ DT +LEAFA++FKQRRIKLG TQADVG AL L
Sbjct: 136 HHHAMEREP--------PEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY--- 184
Query: 270 VGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 329
SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + + G K++
Sbjct: 185 GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRK 241
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE +F QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 242 KRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 297
>gi|371786485|emb|CBY77551.1| POU-IV b, partial [Pecten maximus]
Length = 192
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/82 (92%), Positives = 79/82 (96%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
DT+ DPRELEAFAERFKQRRIKLGVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSH
Sbjct: 111 DTECDPRELEAFAERFKQRRIKLGVTQADVGNALANLKLPGVGSLSQSTICRFESLTLSH 170
Query: 289 NNMIALKPILQAWLEEAEAQAK 310
NNMIALKPILQAWLEEAE QA+
Sbjct: 171 NNMIALKPILQAWLEEAEKQAR 192
>gi|2511566|emb|CAA75353.1| APH-1 [Artemia franciscana]
Length = 388
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 102/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 175 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 231
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F Q +PS +
Sbjct: 232 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQSKPSAQ 288
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I A+A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 289 EITALADSLQLEKEVVRVWFCNRRQKEKRM 318
>gi|347965216|ref|XP_003435730.1| AGAP005878-PB [Anopheles gambiae str. PEST]
gi|333469387|gb|EGK97282.1| AGAP005878-PB [Anopheles gambiae str. PEST]
Length = 774
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 106/151 (70%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 377 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 433
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+LQ WLEEA++ + P + + A G K++KRTSI K +LE +F QP+PS
Sbjct: 434 PLLQKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSA 489
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I+ +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 490 QEISTLADSLQLEKEVVRVWFCNRRQKEKRM 520
>gi|354499674|ref|XP_003511933.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Cricetulus griseus]
Length = 309
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 99/142 (69%), Gaps = 15/142 (10%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 116 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 169
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 170 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 229
Query: 297 ILQAWLEEAEAQ--AKNKRRDP 316
ILQAWLEEAE KN++R P
Sbjct: 230 ILQAWLEEAEKSPPRKNEQRLP 251
>gi|2495313|sp|Q17237.1|SGF3_BOMMO RecName: Full=Silk gland factor 3; Short=SGF-3; AltName: Full=POU
domain protein M1
gi|156010|gb|AAA27841.1| POU domain protein [Bombyx mori]
Length = 351
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 107/159 (67%), Gaps = 7/159 (4%)
Query: 228 PDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
P+ DT +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L L
Sbjct: 147 PEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQL 203
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
S NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 204 SFKNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHF 260
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 261 HKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 299
>gi|20373129|ref|NP_571225.1| POU domain, class 3, transcription factor 3-A [Danio rerio]
gi|2789662|gb|AAC41300.1| type III POU domain protein [Danio rerio]
Length = 445
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 238 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 294
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 295 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 350
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 351 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 391
>gi|42406356|gb|AAH65961.1| POU domain gene 12 [Danio rerio]
Length = 446
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 239 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 295
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 296 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 351
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 352 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 392
>gi|4337121|gb|AAB92590.2| alternatively spliced brn-1.1 protein variant [Danio rerio]
Length = 441
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 234 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 290
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 291 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 346
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 347 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 387
>gi|348572011|ref|XP_003471788.1| PREDICTED: POU domain, class 3, transcription factor 3-like,
partial [Cavia porcellus]
Length = 303
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 114/179 (63%), Gaps = 13/179 (7%)
Query: 213 HGATHHPVMPPGLQ----HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
GA HH PGL H D DT +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 96 QGAPHHGGAGPGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY- 154
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GE 326
SQ+TICRFE+L LS NM LKP+L WLEEA++ + P + + A G
Sbjct: 155 --GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGR 208
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K++KRTSI K +LE++F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 209 KRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 267
>gi|410932012|ref|XP_003979388.1| PREDICTED: POU domain, class 4, transcription factor 2-like,
partial [Takifugu rubripes]
Length = 248
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/107 (73%), Positives = 88/107 (82%), Gaps = 6/107 (5%)
Query: 200 HHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVG 259
+H H A+ +H HG +PP + D D DPR+LEAFAERFKQRRIKLGVTQADVG
Sbjct: 146 NHMHQAAINMAHAHG------LPPHMGMTDVDADPRDLEAFAERFKQRRIKLGVTQADVG 199
Query: 260 KALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 306
ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 200 AALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 246
>gi|260784208|ref|XP_002587160.1| hypothetical protein BRAFLDRAFT_116913 [Branchiostoma floridae]
gi|229272299|gb|EEN43171.1| hypothetical protein BRAFLDRAFT_116913 [Branchiostoma floridae]
Length = 410
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 103/149 (69%), Gaps = 6/149 (4%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP
Sbjct: 213 LEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKP 269
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
+LQ WLEEA++ + + + G K++KRTSI K +LE++F QP+PS ++
Sbjct: 270 LLQKWLEEADSSSGSPSS---IDKIAAQGRKRKKRTSIEVTVKGALESHFLKQPKPSAQE 326
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
IA +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 327 IAQLADSLQLEKEVVRVWFCNRRQKEKRM 355
>gi|444909140|ref|NP_001263306.1| POU class 3 homeobox 2 [Xenopus (Silurana) tropicalis]
gi|383210108|dbj|BAM08270.1| brain-2 [Xenopus (Silurana) tropicalis]
Length = 382
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 198 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 254
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 255 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 310
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 311 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 351
>gi|20384894|gb|AAL85498.1| transcription factor AmphiBrn1/2/4 [Branchiostoma floridae]
Length = 410
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 103/149 (69%), Gaps = 6/149 (4%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP
Sbjct: 213 LEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKP 269
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
+LQ WLEEA++ + + + G K++KRTSI K +LE++F QP+PS ++
Sbjct: 270 LLQKWLEEADSSSGSPSS---IDKIAAQGRKRKKRTSIEVTVKGALESHFLKQPKPSAQE 326
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
IA +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 327 IAQLADSLQLEKEVVRVWFCNRRQKEKRM 355
>gi|241652495|ref|XP_002411292.1| N-Oct 3 octamer DNA (ATGCAAAT) binding protein with brn-2 POU
domain, putative [Ixodes scapularis]
gi|215503922|gb|EEC13416.1| N-Oct 3 octamer DNA (ATGCAAAT) binding protein with brn-2 POU
domain, putative [Ixodes scapularis]
Length = 414
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 204 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 260
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K +LE++F QP+PS +
Sbjct: 261 PLLAKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFHKQPKPSAQ 317
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+IA++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 318 EIASLADSLQLEKEVVRVWFCNRRQKEKRM 347
>gi|1730449|emb|CAA69212.1| POU domain protein [Danio rerio]
gi|2599291|gb|AAB84079.1| class III POU domain protein [Danio rerio]
Length = 428
Score = 160 bits (405), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 238 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 294
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 295 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 350
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 351 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 391
>gi|354502206|ref|XP_003513178.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Cricetulus griseus]
Length = 429
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 122/208 (58%), Gaps = 19/208 (9%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP--PGLQHPDTDTDPRELEAFAERF 244
GP + S G SG+ H H PV PGL D +D ELE FA+ F
Sbjct: 135 GPGLTSQAVGRPGL---SGSTLEPHLEAPQHLPVPKHLPGLGGTDEPSDLEELEKFAKTF 191
Query: 245 KQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEE 304
KQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +
Sbjct: 192 KQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLND 248
Query: 305 AEAQAKNKRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 357
AE+ DP +APS P G K++KRTSI + +LE F P+PS E+I
Sbjct: 249 AESSPS----DPSANAPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEI 304
Query: 358 AAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 305 SMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|28277459|gb|AAH44354.1| Pou12 protein [Danio rerio]
gi|197247239|gb|AAI65334.1| Pou12 protein [Danio rerio]
Length = 434
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 238 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 294
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 295 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 350
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 351 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 391
>gi|391347213|ref|XP_003747859.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Metaseiulus occidentalis]
Length = 442
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 213 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 269
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K +LE++F QP+PS +
Sbjct: 270 PLLAKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFHKQPKPSAQ 326
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+IA++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 327 EIASLADSLQLEKEVVRVWFCNRRQKEKRM 356
>gi|296198830|ref|XP_002746893.1| PREDICTED: POU domain, class 3, transcription factor 2 [Callithrix
jacchus]
Length = 264
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 114/176 (64%), Gaps = 16/176 (9%)
Query: 212 HHGATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGV 270
H GA H P H D DT +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 72 HPGAHHDP-------HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---G 121
Query: 271 GALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKR 329
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + P + + A G K++
Sbjct: 122 NVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRK 177
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE++F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 178 KRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 233
>gi|432880457|ref|XP_004073707.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Oryzias latipes]
Length = 361
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/222 (42%), Positives = 124/222 (55%), Gaps = 27/222 (12%)
Query: 178 HQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL------------ 225
Q++ S G ++N M+ H G P S+ G HP + L
Sbjct: 124 QQINLYSQTGFTVNGMLD-------HGGLTPPSNPQGQGMHPGLRDTLSPEHSDLGGHHC 176
Query: 226 -QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES 283
H D +T ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+
Sbjct: 177 HDHSDEETPTSDELEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEA 233
Query: 284 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
L LS NM LKP+L WLEEA++ + + G K++KRTSI K LE
Sbjct: 234 LQLSFKNMCKLKPLLNKWLEEADSSTGSSSS---IDKIAAQGRKRKKRTSIEVSVKGVLE 290
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 291 THFLKCPKPSAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 332
>gi|148237842|ref|NP_001090220.1| POU domain, class 3, transcription factor 2-B [Xenopus laevis]
gi|2495308|sp|P70030.1|P3F2B_XENLA RecName: Full=POU domain, class 3, transcription factor 2-B;
AltName: Full=Transcription factor POU3-B; Short=XlPOU3B
gi|1592827|emb|CAA65283.1| POU3b [Xenopus laevis]
gi|47939678|gb|AAH72060.1| Pou3f4 protein [Xenopus laevis]
gi|169642702|gb|AAI60684.1| POU domain, class 3, transcription factor 4 [Xenopus laevis]
Length = 385
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 201 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 257
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 258 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 313
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 314 HFLKCPKPAAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 354
>gi|410896712|ref|XP_003961843.1| PREDICTED: POU domain, class 3, transcription factor 3-A-like
[Takifugu rubripes]
Length = 307
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 110/176 (62%), Gaps = 14/176 (7%)
Query: 211 HHHGATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPG 269
+HG H P H D DT +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 108 QNHGVNHDP-------HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY--- 157
Query: 270 VGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 329
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + G K++
Sbjct: 158 GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGSPT---SIDKIATQGRKRK 214
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE++F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 215 KRTSIEVSVKGALESHFLKCPKPSAQEINSLADTLQLEKEVVRVWFCNRRQKEKRM 270
>gi|269849628|sp|P56224.2|P3F3A_DANRE RecName: Full=POU domain, class 3, transcription factor 3-A;
AltName: Full=Brain-specific homeobox/POU domain protein
1.1; Short=Brain-1.1; Short=zfBrn-1.1; AltName:
Full=Class III POU domain protein taichi; AltName:
Full=POU domain protein 12; Short=ZP-12
gi|37194901|gb|AAH58318.1| Pou12 protein [Danio rerio]
Length = 438
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 239 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 295
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 296 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 351
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 352 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 392
>gi|1730450|emb|CAA69213.1| POU domain protein [Danio rerio]
Length = 437
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 238 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 294
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 295 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 350
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 351 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 391
>gi|395737514|ref|XP_003776927.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 2 [Pongo abelii]
Length = 383
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 199 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 255
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 256 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 311
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 312 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 352
>gi|410931934|ref|XP_003979350.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Takifugu rubripes]
Length = 408
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 110/176 (62%), Gaps = 14/176 (7%)
Query: 211 HHHGATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPG 269
+HG H P H D DT +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 219 QNHGVNHDP-------HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY--- 268
Query: 270 VGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 329
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + G K++
Sbjct: 269 GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGSPT---SIDKIATQGRKRK 325
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
KRTSI K +LE++F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 326 KRTSIEVSVKGALESHFLKCPKPSAQEINSLADTLQLEKEVVRVWFCNRRQKEKRM 381
>gi|109072165|ref|XP_001083202.1| PREDICTED: POU domain, class 3, transcription factor 2-like [Macaca
mulatta]
Length = 404
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 220 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 276
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 277 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 332
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 333 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 373
>gi|2495310|sp|P79745.1|P3F3B_DANRE RecName: Full=POU domain, class 3, transcription factor 3-B;
AltName: Full=Brain-specific homeobox/POU domain protein
1.0; Short=Brain-1.0; Short=zfBrn-1.0; AltName: Full=POU
domain protein 1; Short=ZFPOU1; AltName: Full=POU domain
protein 23; Short=ZP-23
gi|1730453|emb|CAA69215.1| POU domain protein [Danio rerio]
Length = 443
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 235 HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 291
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 292 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 347
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 348 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 388
>gi|390358089|ref|XP_003729178.1| PREDICTED: POU domain, class 3, transcription factor 2-B-like
[Strongylocentrotus purpuratus]
Length = 467
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 101/150 (67%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA+ FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 226 DLEQFAKTFKQRRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 282
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + + G K++KRTSI K +LE F QP+PS +
Sbjct: 283 PLLAKWLEEADSTSGSPT---SLDKIAAQGRKRKKRTSIEVTIKGALENAFLKQPKPSAQ 339
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+A+A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 340 EISALADGLQLEKEVVRVWFCNRRQKEKRM 369
>gi|348506702|ref|XP_003440897.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Oreochromis niloticus]
Length = 392
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 126/221 (57%), Gaps = 22/221 (9%)
Query: 180 LHSSSMYGPSMNSMMTGHHHH-----HHHS--------GALPASHHHGATHHPVMPPGLQ 226
++S S +G G HHH HHS G P +H THH
Sbjct: 151 VYSQSGFGLMPGGEQGGMHHHPLREEDHHSHSPHLSEHGGGPGAHQQSLTHHHQHGGHQD 210
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
D DT ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 211 QSDEDTPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 267
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 268 LSFKNMCKLKPLLNKWLEEADSTSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALES 323
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 324 HFLKCPKPGAAEINSLADSLQLEKEVVRVWFCNRRQKEKRM 364
>gi|45504384|ref|NP_958855.1| POU domain, class 3, transcription factor 3-B isoform 2 [Danio
rerio]
gi|34193952|gb|AAH56549.1| POU domain gene 23 [Danio rerio]
Length = 444
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 236 HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 292
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 293 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 348
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 349 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 389
>gi|37589103|gb|AAH51699.2| POU class 3 homeobox 2 [Homo sapiens]
Length = 443
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 259 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 315
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 316 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 372
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 373 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 412
>gi|122692377|ref|NP_001073817.1| POU domain, class 3, transcription factor 2 [Bos taurus]
gi|86438578|gb|AAI12697.1| POU class 3 homeobox 2 [Bos taurus]
Length = 438
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 254 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 310
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 311 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 367
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 368 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 407
>gi|355561921|gb|EHH18553.1| hypothetical protein EGK_15184 [Macaca mulatta]
Length = 302
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 118 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 174
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 175 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 230
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 231 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 271
>gi|269849627|sp|P31365.2|P3F2A_XENLA RecName: Full=POU domain, class 3, transcription factor 2-A;
AltName: Full=Transcription factor POU3-A; Short=XlPOU3A
gi|213625205|gb|AAI70064.1| POU domain, class 3, transcription factor 2 [Xenopus laevis]
gi|213626767|gb|AAI70066.1| POU domain, class 3, transcription factor 2 [Xenopus laevis]
Length = 382
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 198 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 254
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 255 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 310
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 311 HFLKCPKPSAPEITSLADSLQLEKEVVRVWFCNRRQKEKRM 351
>gi|6679423|ref|NP_032925.1| POU domain, class 3, transcription factor 2 [Mus musculus]
gi|400662|sp|P31360.1|PO3F2_MOUSE RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 2;
Short=Brain-2; Short=Brn-2; AltName: Full=Nervous
system-specific octamer-binding transcription factor
N-Oct-3; AltName: Full=Octamer-binding protein 7;
Short=Oct-7; AltName: Full=Octamer-binding transcription
factor 7; Short=OTF-7
gi|200447|gb|AAA39961.1| brain-2 class III POU-domain protein [Mus musculus]
gi|225000336|gb|AAI72622.1| POU domain, class 3, transcription factor 2 [synthetic construct]
gi|225000604|gb|AAI72726.1| POU domain, class 3, transcription factor 2 [synthetic construct]
Length = 445
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 261 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 317
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 318 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 374
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 375 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414
>gi|51702521|ref|NP_005595.2| POU domain, class 3, transcription factor 2 [Homo sapiens]
gi|78100757|sp|P20265.4|PO3F2_HUMAN RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 2;
Short=Brain-2; Short=Brn-2; AltName: Full=Nervous
system-specific octamer-binding transcription factor
N-Oct-3; AltName: Full=Octamer-binding protein 7;
Short=Oct-7; AltName: Full=Octamer-binding transcription
factor 7; Short=OTF-7
gi|119568876|gb|EAW48491.1| POU domain, class 3, transcription factor 2 [Homo sapiens]
gi|383210102|dbj|BAM08267.1| transcription factor POU3f2 Brn-2 [Pongo pygmaeus]
gi|383210104|dbj|BAM08268.1| transcription factor POU3f2 Brn-2 [Gorilla gorilla]
gi|383210106|dbj|BAM08269.1| transcription factor POU3f2 Brn-2 [Pan troglodytes]
Length = 443
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 259 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 315
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 316 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 372
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 373 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 412
>gi|972767|gb|AAB59611.1| POU-domain transcription factor [Homo sapiens]
Length = 443
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 259 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 315
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 316 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 372
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 373 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 412
>gi|47226220|emb|CAG08367.1| unnamed protein product [Tetraodon nigroviridis]
Length = 361
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 168 TPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL-- 225
TP+S + + Q++ S G ++N M+ H G P + G HP + L
Sbjct: 115 TPVSHNSSSVQQINIYSQAGFTVNGMLD-------HGGLTPPPNPQGQGMHPGLRDTLSP 167
Query: 226 -----------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 273
H D +T ELE FA++FKQRRIKLG TQADVG AL L
Sbjct: 168 DHSDLGGHHCHDHSDEETPTSDELEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVF 224
Query: 274 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTS 333
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + G K++KRTS
Sbjct: 225 SQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSSSS---IDKIAAQGRKRKKRTS 281
Query: 334 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I K LE +F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 282 IEVSVKGVLETHFLKCPKPSAQEITSLADTLQLEKEVVRVWFCNRRQKEKRM 333
>gi|194035107|ref|XP_001926276.1| PREDICTED: POU domain, class 3, transcription factor 2 [Sus scrofa]
Length = 442
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 258 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 314
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 315 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 371
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 372 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 411
>gi|90762056|gb|ABD97868.1| POUIII transcription factor [Acropora millepora]
Length = 389
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 101/163 (61%), Gaps = 6/163 (3%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ D +LE FA+ FKQRRIKLG TQADVG AL L SQ+TICRFE
Sbjct: 191 PDLEAQDDTPTSDDLEQFAKEFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFE 247
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSL 342
+L LS NM LKP+L WLEEA+ N + G K++KRTSI K +L
Sbjct: 248 ALQLSFKNMCKLKPLLAKWLEEAD---NNNGAASGLDKLATQGRKRKKRTSIEVAVKGAL 304
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E +F P+PS ++I ++AE L L K VVRVWFCN+RQK+KRM
Sbjct: 305 ENHFCKNPKPSAQEIGSLAENLGLDKEVVRVWFCNRRQKEKRM 347
>gi|35085|emb|CAA77990.1| N-Oct 3 octamer DNA (ATGCAAAT) binding protein with brn-2 POU
domain [Homo sapiens]
Length = 443
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 259 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 315
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 316 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 372
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 373 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 412
>gi|27370988|gb|AAH41298.1| Pou3f2 protein, partial [Xenopus laevis]
Length = 406
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 222 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 278
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 279 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 334
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 335 HFLKCPKPSAPEITSLADSLQLEKEVVRVWFCNRRQKEKRM 375
>gi|158749604|ref|NP_742082.1| POU domain, class 3, transcription factor 2 [Rattus norvegicus]
gi|3024235|sp|P56222.1|PO3F2_RAT RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 2;
Short=Brain-2; Short=Brn-2; AltName: Full=Nervous
system-specific octamer-binding transcription factor
N-Oct-3; AltName: Full=Octamer-binding protein 7;
Short=Oct-7; AltName: Full=Octamer-binding transcription
factor 7; Short=OTF-7
Length = 445
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 261 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 317
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 318 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIASQGRKRKKRTSIEVSVKGALESH 374
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 375 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414
>gi|149045532|gb|EDL98532.1| POU domain, class 3, transcription factor 2 [Rattus norvegicus]
Length = 445
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 261 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 317
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 318 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 374
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 375 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414
>gi|193787887|dbj|BAG53090.1| unnamed protein product [Homo sapiens]
Length = 376
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 192 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 248
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 249 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 305
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 306 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 345
>gi|402867747|ref|XP_003897998.1| PREDICTED: POU domain, class 3, transcription factor 2 [Papio
anubis]
Length = 328
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 144 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 200
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 201 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 256
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 257 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 297
>gi|190337565|gb|AAI63489.1| Pou23 protein [Danio rerio]
Length = 426
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 236 HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 292
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 293 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 348
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 349 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 389
>gi|269785105|ref|NP_001161508.1| BRN1.2.4 transcription factor [Saccoglossus kowalevskii]
gi|268053985|gb|ACY92479.1| BRN1.2.4 transcription factor [Saccoglossus kowalevskii]
Length = 414
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 6/148 (4%)
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
E FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+
Sbjct: 192 EQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPL 248
Query: 298 LQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 357
LQ WLEEA++ + + G K++KRTSI K +LE +F QP+P+ +I
Sbjct: 249 LQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVTVKGALENHFIKQPKPAAPEI 305
Query: 358 AAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+AE L L+K VVRVWFCN+RQK+KRM
Sbjct: 306 TQLAESLQLEKEVVRVWFCNRRQKEKRM 333
>gi|238550120|ref|NP_571177.2| POU domain, class 3, transcription factor 3-B isoform 1 [Danio
rerio]
gi|1730452|emb|CAA69214.1| POU domain protein [Danio rerio]
gi|33989457|gb|AAH56320.1| Pou23 protein [Danio rerio]
Length = 425
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 235 HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 291
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 292 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 347
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 348 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 388
>gi|194216281|ref|XP_001501398.2| PREDICTED: POU domain, class 3, transcription factor 2-like [Equus
caballus]
Length = 270
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 86 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 142
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 143 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 198
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 199 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 239
>gi|47226909|emb|CAG05801.1| unnamed protein product [Tetraodon nigroviridis]
Length = 420
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 109/173 (63%), Gaps = 14/173 (8%)
Query: 214 GATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
G TH P H D DT +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 234 GVTHDP-------HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNV 283
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + G K++KRT
Sbjct: 284 FSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGSPT---SIDKIATQGRKRKKRT 340
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
SI K +LE++F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 341 SIEVSVKGALESHFLKCPKPSAQEINSLADTLQLEKEVVRVWFCNRRQKEKRM 393
>gi|327279170|ref|XP_003224330.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Anolis carolinensis]
gi|3176106|dbj|BAA28665.1| Brain-1 gene [Anolis carolinensis]
Length = 454
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 105/160 (65%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 265 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 321
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + G K++KRTSI K +LE++
Sbjct: 322 LSFKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 378
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 379 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 418
>gi|301773222|ref|XP_002922031.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Ailuropoda melanoleuca]
Length = 378
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 194 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 250
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 251 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 306
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 347
>gi|410914347|ref|XP_003970649.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Takifugu rubripes]
Length = 361
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 96/232 (41%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 168 TPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL-- 225
TP+S + + Q++ S G ++N M+ H G P + G HP + L
Sbjct: 115 TPVSHNSSSVQQINIYSQAGFTVNGMLD-------HGGLTPPPNPQGQGMHPGLRDTLSP 167
Query: 226 -----------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 273
H D +T ELE FA++FKQRRIKLG TQADVG AL L
Sbjct: 168 DHSDLGGHHCHDHSDEETPTSDELEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVF 224
Query: 274 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTS 333
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + G K++KRTS
Sbjct: 225 SQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSSSS---IDKIAAQGRKRKKRTS 281
Query: 334 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I K LE +F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 282 IEVSVKGVLETHFLKCPKPSAQEITSLADTLQLEKEVVRVWFCNRRQKEKRM 333
>gi|16611603|gb|AAL27274.1|AF276075_1 POU domain transcription factor brn-1 [Ambystoma mexicanum]
Length = 403
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/158 (51%), Positives = 104/158 (65%), Gaps = 7/158 (4%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 216 DEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLS 272
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
NM LKP+L WLEEA++ + + G K++KRTSI K +LE++F
Sbjct: 273 FKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVGVKGALESHFL 329
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+PS ++I A+A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 330 KCPKPSAQEITALADSLQLEKEVVRVWFCNRRQKEKRM 367
>gi|431838132|gb|ELK00064.1| POU domain, class 3, transcription factor 2 [Pteropus alecto]
Length = 344
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 160 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 216
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 217 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 272
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 273 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 313
>gi|410904917|ref|XP_003965938.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Takifugu rubripes]
Length = 380
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 200 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 256
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 257 LSFKNMCKLKPLLNKWLEEADSTSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALES 312
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 313 HFLKCPKPSASEIISLADNLHLEKEVVRVWFCNRRQKEKRM 353
>gi|168279029|dbj|BAG11394.1| POU domain, class 3, transcription factor 2 [synthetic construct]
Length = 265
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 81 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 137
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 138 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 193
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 194 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 234
>gi|348531477|ref|XP_003453235.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 1 [Oreochromis niloticus]
Length = 442
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP
Sbjct: 249 LEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKP 305
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
+L WLEEA++ + P + + A G K++KRTSI K +LE++F P+PS +
Sbjct: 306 LLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQ 361
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 362 EISSLADNLQLEKEVVRVWFCNRRQKEKRM 391
>gi|47682959|gb|AAH70001.1| Pou12 protein [Danio rerio]
Length = 437
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 238 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 294
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS N+ LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 295 LSFKNICKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 350
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 351 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 391
>gi|344256487|gb|EGW12591.1| POU domain, class 4, transcription factor 2 [Cricetulus griseus]
Length = 207
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 93/130 (71%), Gaps = 13/130 (10%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 60 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 113
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 114 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 173
Query: 297 ILQAWLEEAE 306
ILQAWLEEAE
Sbjct: 174 ILQAWLEEAE 183
>gi|301623804|ref|XP_002941201.1| PREDICTED: POU domain, class 3, transcription factor 3-like
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 259 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 315
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + G K++KRTSI K +LE++
Sbjct: 316 LSFKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 372
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 373 FLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 412
>gi|5453936|ref|NP_006227.1| POU domain, class 3, transcription factor 3 [Homo sapiens]
gi|2506534|sp|P20264.2|PO3F3_HUMAN RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 1;
Short=Brain-1; Short=Brn-1; AltName:
Full=Octamer-binding protein 8; Short=Oct-8; AltName:
Full=Octamer-binding transcription factor 8; Short=OTF-8
gi|1902886|dbj|BAA19459.1| Brain-1 [Homo sapiens]
gi|62630228|gb|AAX88973.1| unknown [Homo sapiens]
gi|195934807|gb|AAI68366.1| POU class 3 homeobox 3 [synthetic construct]
Length = 500
Score = 158 bits (400), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 311 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 367
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 368 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 423
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 424 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 464
>gi|200445|gb|AAA39960.1| Brain-1 class III POU-domain protein [Mus musculus]
Length = 495
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 306 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 362
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 363 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 418
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 419 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 459
>gi|112421036|ref|NP_032926.2| POU domain, class 3, transcription factor 3 [Mus musculus]
gi|341941381|sp|P31361.2|PO3F3_MOUSE RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 1;
Short=Brain-1; Short=Brn-1; AltName:
Full=Octamer-binding protein 8; Short=Oct-8; AltName:
Full=Octamer-binding transcription factor 8; Short=OTF-8
gi|162319502|gb|AAI56038.1| POU domain, class 3, transcription factor 3 [synthetic construct]
Length = 497
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 308 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 364
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 365 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 420
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 421 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 461
>gi|119622176|gb|EAX01771.1| POU domain, class 3, transcription factor 3 [Homo sapiens]
Length = 500
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 311 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 367
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 368 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 423
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 424 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 464
>gi|403261872|ref|XP_003923331.1| PREDICTED: POU domain, class 3, transcription factor 2, partial
[Saimiri boliviensis boliviensis]
Length = 409
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 225 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 281
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 282 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 337
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 338 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 378
>gi|20301970|ref|NP_620192.1| POU domain, class 3, transcription factor 3 [Rattus norvegicus]
gi|5915802|sp|Q63262.2|PO3F3_RAT RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 1;
Short=Brain-1; Short=Brn-1
gi|2760445|emb|CAA04893.1| Brain-1 (Brn-1) protein [Rattus norvegicus]
Length = 497
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 308 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 364
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 365 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 420
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 421 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 461
>gi|410906475|ref|XP_003966717.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 2 [Takifugu rubripes]
Length = 438
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP
Sbjct: 246 LEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKP 302
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
+L WLEEA++ + P + + A G K++KRTSI K +LE++F P+PS +
Sbjct: 303 LLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQ 358
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 359 EISSLADNLQLEKEVVRVWFCNRRQKEKRM 388
>gi|327277336|ref|XP_003223421.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Anolis
carolinensis]
gi|3176110|dbj|BAA28667.1| Brain-4 gene [Anolis carolinensis]
Length = 356
Score = 158 bits (399), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 107/168 (63%), Gaps = 10/168 (5%)
Query: 218 HPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
HP P + P +D ELE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 168 HPGDPSDEETPTSD----ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 220
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEEA++ + + G K++KRTSI
Sbjct: 221 ICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPT---GLDKIAAQGRKRKKRTSIEVS 277
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K LE +F P+P+ ++IAA+A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 278 VKGVLETHFLKCPKPAAQEIAALADSLQLEKEVVRVWFCNRRQKEKRM 325
>gi|348531008|ref|XP_003453002.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Oreochromis niloticus]
Length = 418
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 105/160 (65%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 228 HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 284
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + G K++KRTSI K +LE++
Sbjct: 285 LSFKNMCKLKPLLNKWLEEADSTTGSPT---SIDKIATQGRKRKKRTSIEVSVKGALESH 341
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 342 FLKCPKPSAQEINSLADTLQLEKEVVRVWFCNRRQKEKRM 381
>gi|3176108|dbj|BAA28666.1| Brain-2 gene [Anolis carolinensis]
Length = 447
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 261 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 317
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 318 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 374
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 375 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414
>gi|348536696|ref|XP_003455832.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Oreochromis niloticus]
Length = 361
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D +T ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 180 HSDEETPTSDELEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 236
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + G K++KRTSI K LE +
Sbjct: 237 LSFKNMCKLKPLLNKWLEEADSSTGSAS---SIDKIAAQGRKRKKRTSIEVSVKGVLETH 293
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 294 FLKCPKPSAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 333
>gi|426257310|ref|XP_004022272.1| PREDICTED: POU domain, class 3, transcription factor 4 [Ovis aries]
Length = 363
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 225 LQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES 283
L H D +T ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+
Sbjct: 181 LDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEA 237
Query: 284 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
L LS NM LKP+L WLEEA++ + + G K++KRTSI K LE
Sbjct: 238 LQLSFKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLE 294
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 295 THFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|334346780|ref|XP_001371773.2| PREDICTED: POU domain, class 3, transcription factor 3-like
[Monodelphis domestica]
Length = 521
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 332 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 388
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 389 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 444
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 445 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 485
>gi|348531479|ref|XP_003453236.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 2 [Oreochromis niloticus]
Length = 428
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP
Sbjct: 249 LEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKP 305
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
+L WLEEA++ + P + + A G K++KRTSI K +LE++F P+PS +
Sbjct: 306 LLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQ 361
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 362 EISSLADNLQLEKEVVRVWFCNRRQKEKRM 391
>gi|281343628|gb|EFB19212.1| hypothetical protein PANDA_010962 [Ailuropoda melanoleuca]
Length = 370
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 186 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 242
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 243 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 298
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 299 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 339
>gi|76667298|ref|XP_589021.2| PREDICTED: POU domain, class 3, transcription factor 4 [Bos taurus]
gi|297492934|ref|XP_002699986.1| PREDICTED: POU domain, class 3, transcription factor 4 [Bos taurus]
gi|296470907|tpg|DAA13022.1| TPA: POU domain, class 3, transcription factor 4-like [Bos taurus]
gi|440908732|gb|ELR58719.1| POU domain, class 3, transcription factor 4 [Bos grunniens mutus]
Length = 363
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 225 LQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES 283
L H D +T ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+
Sbjct: 181 LDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEA 237
Query: 284 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
L LS NM LKP+L WLEEA++ + + G K++KRTSI K LE
Sbjct: 238 LQLSFKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLE 294
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 295 THFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|12024865|gb|AAG45670.1|AF153700_1 class IV POU domain protein 2 [Condylactis gigantea]
Length = 110
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/112 (71%), Positives = 93/112 (83%), Gaps = 4/112 (3%)
Query: 261 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 320
ALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWLEEAE K K+ + +
Sbjct: 2 ALAHLKIPGVGSLSQSTICRFESLTLSHNNMMALKPVLTAWLEEAEKAYKTKQMN---SA 58
Query: 321 VLP-AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
LP + +KKRKRTSI A EKRSLEAYFA+ PRPS +KIA+I EKLDL KNVV
Sbjct: 59 FLPNSSDKKRKRTSIGAAEKRSLEAYFAMNPRPSSDKIASIEEKLDLSKNVV 110
>gi|410916423|ref|XP_003971686.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Takifugu rubripes]
Length = 583
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 97/221 (43%), Positives = 126/221 (57%), Gaps = 22/221 (9%)
Query: 180 LHSSSMYGPSMNSMMTGHHHH-----HHHS--------GALPASHHHGATHHPVMPPGLQ 226
++S S +G G HHH HHS G P +H +HH
Sbjct: 132 VYSQSGFGLMPGGEQGGMHHHPLRDEDHHSHSPHLSEHGGGPVAHQQSLSHHHQHGGHHD 191
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
D DT ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 192 QSDEDTPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 248
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 249 LSFKNMCKLKPLLNKWLEEADSTSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALES 304
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 305 HFLKCPKPGAAEINSLADSLQLEKEVVRVWFCNRRQKEKRM 345
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 106/159 (66%), Gaps = 9/159 (5%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D DT ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 404 DEDTPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLS 460
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYF 346
NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE++F
Sbjct: 461 FKNMCKLKPLLNKWLEEADSTSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALESHF 516
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+P +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 517 LKCPKPGAAEINSLADSLQLEKEVVRVWFCNRRQKEKRM 555
>gi|327261504|ref|XP_003215570.1| PREDICTED: POU domain, class 3, transcription factor 2-like [Anolis
carolinensis]
Length = 343
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 157 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 213
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 214 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 269
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 270 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 310
>gi|431913976|gb|ELK15248.1| POU domain, class 3, transcription factor 4 [Pteropus alecto]
Length = 361
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Query: 208 PASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
P H+ A+HH + P +D ELE FA++FKQRRIKLG TQADVG AL L
Sbjct: 169 PPDHNDLASHHCQDHSDEETPTSD----ELEQFAKQFKQRRIKLGFTQADVGLALGTLY- 223
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK 327
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + G K
Sbjct: 224 --GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRK 278
Query: 328 KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++KRTSI K LE +F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 279 RKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|74273338|gb|ABA01337.1| POU domain class 3 transcription factor 4 [Ovis aries]
Length = 307
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 106/162 (65%), Gaps = 7/162 (4%)
Query: 225 LQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES 283
L H D +T ELE FA++FKQRRIKLG TQADVG AL L LSQ+TICRFE+
Sbjct: 143 LDHSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVLSQTTICRFEA 199
Query: 284 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
L LS NM LKP+L WLEEA++ + + G K++KRTSI K LE
Sbjct: 200 LQLSFKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLE 256
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 257 THFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 298
>gi|410906473|ref|XP_003966716.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 1 [Takifugu rubripes]
Length = 425
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/150 (52%), Positives = 104/150 (69%), Gaps = 8/150 (5%)
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP
Sbjct: 246 LEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKP 302
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
+L WLEEA++ + P + + A G K++KRTSI K +LE++F P+PS +
Sbjct: 303 LLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQ 358
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 359 EISSLADNLQLEKEVVRVWFCNRRQKEKRM 388
>gi|299474127|gb|ADJ18297.1| transcription factor [Takifugu rubripes]
Length = 393
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 123/220 (55%), Gaps = 20/220 (9%)
Query: 180 LHSSSMYGPSMNSMMTGHHHH-----HHHS--------GALPASHHHGATHHPVMPPGLQ 226
++S S +G G HHH HHS G P +H +HH
Sbjct: 152 VYSQSGFGLMPGGEQGGMHHHPLRDEDHHSHSPHLSEHGGGPVAHQQSLSHHHQHGGHHD 211
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
D DT ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 212 QSDEDTPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 268
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 269 LSFKNMCKLKPLLNKWLEEADSTSGSPT---SLDKIAAQGRKRKKRTSIEVGVKGALESH 325
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+P +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 326 FLKCPKPGAAEINSLADSLQLEKEVVRVWFCNRRQKEKRM 365
>gi|410041103|ref|XP_003950948.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 2 [Pan troglodytes]
Length = 690
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 506 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 562
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 563 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 619
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 620 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 659
>gi|148673593|gb|EDL05540.1| POU domain, class 3, transcription factor 2 [Mus musculus]
Length = 312
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 128 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 184
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 185 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 240
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 241 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 281
>gi|47224217|emb|CAG09063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 400
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 123/220 (55%), Gaps = 20/220 (9%)
Query: 180 LHSSSMYGPSMNSMMTGHHHH-----HHHS--------GALPASHHHGATHHPVMPPGLQ 226
++S S +G G HHH HHS G P +H +HH
Sbjct: 159 VYSQSAFGLMPGGEQGGMHHHPLRDEEHHSHSPHLSEHGGGPGAHQQPLSHHHQHGGHHD 218
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
D DT ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 219 QSDEDTPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 275
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 276 LSFKNMCKLKPLLNKWLEEADSTSGSPT---SLDKIAAQGRKRKKRTSIEVGVKGALESH 332
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+P +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 333 FLKCPKPGAAEINSLADSLQLEKEVVRVWFCNRRQKEKRM 372
>gi|319655705|ref|NP_571364.1| brain POU domain gene 1.2 [Danio rerio]
gi|125858057|gb|AAI29153.1| Brain POU domain gene 1.2 [Danio rerio]
Length = 337
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 117/190 (61%), Gaps = 19/190 (10%)
Query: 198 HHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQA 256
HH HHS L + H H P H D DT +LE FA++FKQRRIKLG TQA
Sbjct: 137 HHEEHHSPHL-SEHGH---------PQSLHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQA 186
Query: 257 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 316
DVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + + P
Sbjct: 187 DVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTSGS----P 239
Query: 317 DAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWF 375
+ + A G K++KRTSI K +LE++F P+P +I ++A+ L L+K VVRVWF
Sbjct: 240 TSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPGASEINSLADSLQLEKEVVRVWF 299
Query: 376 CNQRQKQKRM 385
CN+RQK+KRM
Sbjct: 300 CNRRQKEKRM 309
>gi|6002569|gb|AAF00040.1| POU-box protein brain-2 [Coturnix japonica]
Length = 431
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 247 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 303
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 304 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 359
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 360 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 400
>gi|334330119|ref|XP_001380318.2| PREDICTED: POU domain, class 2, transcription factor 3-like
[Monodelphis domestica]
Length = 455
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/163 (50%), Positives = 107/163 (65%), Gaps = 10/163 (6%)
Query: 228 PDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
PD +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 203 PDEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLS 259
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSL 342
NM LKP+L+ WL +AE+ + APS P+ G K++KRTSI + +L
Sbjct: 260 FKNMCKLKPLLEKWLNDAESSPSDSTVS--APSSYPSLSEVFGRKRKKRTSIETNIRLTL 317
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 318 EKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRI 360
>gi|358340381|dbj|GAA34293.2| POU domain transcription factor class 3 [Clonorchis sinensis]
Length = 1247
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 95/150 (63%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 758 DLEIFARMFKQRRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 814
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WL+EA+ + + G K++KRTSI K LE +FA QP+P +
Sbjct: 815 PLLQKWLQEADCSTGTAS---NLDKIAAQGRKRKKRTSIEVSVKGVLETHFARQPKPLAQ 871
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I +A L L+K VVRVWFCN+RQKQKR+
Sbjct: 872 DIVQLANSLGLEKEVVRVWFCNRRQKQKRL 901
>gi|351699031|gb|EHB01950.1| POU domain, class 3, transcription factor 2, partial
[Heterocephalus glaber]
Length = 233
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 49 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 105
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 106 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 161
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 162 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 202
>gi|126342563|ref|XP_001370024.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Monodelphis domestica]
Length = 378
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D +T ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 183 HSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 239
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K LE
Sbjct: 240 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLET 295
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 296 HFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|351712094|gb|EHB15013.1| POU domain, class 3, transcription factor 4 [Heterocephalus glaber]
Length = 361
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 10/178 (5%)
Query: 208 PASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
P H+ +HH + P +D ELE FA++FKQRRIKLG TQADVG AL L
Sbjct: 169 PQDHNELGSHHCQDHSDEETPTSD----ELEQFAKQFKQRRIKLGFTQADVGLALGTLY- 223
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEK 327
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + + G K
Sbjct: 224 --GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRK 278
Query: 328 KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++KRTSI K LE +F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 279 RKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|60547301|gb|AAX23624.1| Brn-1 [Coturnix japonica]
Length = 260
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 71 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 127
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 128 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 183
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 184 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 224
>gi|410904463|ref|XP_003965711.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Takifugu rubripes]
Length = 377
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG 224
L+P+S P N HQ ++S Y ++N+M++ HH P G+ H + P
Sbjct: 125 LSPLS-PASNSHQSLVYSQPGY-TNLNAMLSPQPGTLHHGMRDPLHDDSGSHDHQMESPQ 182
Query: 225 L------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 183 QAFSHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 239
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ N + + G K++KRTSI
Sbjct: 240 ICRFEALQLSFKNMCKLKPLLNKWLEETDS---NTGSPTNLDKIAAQGRKRKKRTSIEVG 296
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I+ +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 297 VKGALENHFLKCPKPSAHEISTLADSLQLEKEVVRVWFCNRRQKEKRM 344
>gi|443708520|gb|ELU03597.1| hypothetical protein CAPTEDRAFT_44575, partial [Capitella teleta]
Length = 165
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 1 HSDEDAPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 57
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+LQ WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 58 LSFKNMCKLKPLLQKWLEEADSTSGS----PTSIDKIAAQGRKRKKRTSIEVTVKGALES 113
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F QP+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 114 HFMKQPKPSAQEITHLADSLQLEKEVVRVWFCNRRQKEKRM 154
>gi|45768559|gb|AAH67685.1| Brn1.2 protein, partial [Danio rerio]
Length = 334
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 117/190 (61%), Gaps = 19/190 (10%)
Query: 198 HHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQA 256
HH HHS L + H H P H D DT +LE FA++FKQRRIKLG TQA
Sbjct: 134 HHEEHHSPHL-SEHGH---------PQSLHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQA 183
Query: 257 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 316
DVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + + P
Sbjct: 184 DVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTSGS----P 236
Query: 317 DAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWF 375
+ + A G K++KRTSI K +LE++F P+P +I ++A+ L L+K VVRVWF
Sbjct: 237 TSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPGASEINSLADSLQLEKEVVRVWF 296
Query: 376 CNQRQKQKRM 385
CN+RQK+KRM
Sbjct: 297 CNRRQKEKRM 306
>gi|157787179|ref|NP_001099215.1| POU domain, class 2, transcription factor 3 [Rattus norvegicus]
gi|149041420|gb|EDL95261.1| POU domain, class 2, transcription factor 3, isoform CRA_a [Rattus
norvegicus]
Length = 430
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 170 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 226
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 227 ALNLSFKNMCKLKPLLEKWLNDAESSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIE 282
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|432109569|gb|ELK33735.1| POU domain, class 3, transcription factor 4 [Myotis davidii]
Length = 361
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|1173442|sp|P42571.1|PO2F3_RAT RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Octamer-binding protein 11; Short=Oct-11; AltName:
Full=Octamer-binding transcription factor 11;
Short=OTF-11; AltName: Full=Transcription factor Skn-1
Length = 430
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 170 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 226
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 227 ALNLSFKNMCKLKPLLEKWLNDAESSPA----DPSASTPSSYPTLSEVFGRKRKKRTSIE 282
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|194045025|ref|XP_001925801.1| PREDICTED: POU domain, class 3, transcription factor 4 [Sus scrofa]
Length = 361
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|27882003|gb|AAH43847.1| Pou50 protein, partial [Xenopus laevis]
Length = 377
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 128/228 (56%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG 224
L PMS P+ N HQ ++S S Y ++N M+ HHS P G V P
Sbjct: 127 LAPMS-PSSNSHQPLIYSQSSYT-NLNGMLGPQASSLHHSMRDPLHDDPGVHDTQVDSPP 184
Query: 225 L------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 185 QHLGHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 241
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ + + + G K++KRTSI
Sbjct: 242 ICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVG 298
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 299 VKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 346
>gi|222976|dbj|BAA02377.1| POU domain protein [Danio rerio]
Length = 425
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG QADVG AL L SQ+TICRFE+L
Sbjct: 235 HSDEDTPTSDDLEHFAKQFKQRRIKLGFKQADVGLALGTLY---GNVFSQTTICRFEALQ 291
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 292 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 347
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 348 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 388
>gi|301789327|ref|XP_002930080.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Ailuropoda melanoleuca]
gi|281354685|gb|EFB30269.1| hypothetical protein PANDA_020426 [Ailuropoda melanoleuca]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|148235592|ref|NP_001090728.1| POU domain, class 3, transcription factor 4 [Xenopus (Silurana)
tropicalis]
gi|281312444|sp|A1L0Z1.1|PO3F4_XENTR RecName: Full=POU domain, class 3, transcription factor 4
gi|119850891|gb|AAI27329.1| pou3f4 protein [Xenopus (Silurana) tropicalis]
Length = 360
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 192 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQATICRFEALQLSFKNMCKLK 248
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 249 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 305
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 306 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 335
>gi|57112535|ref|XP_549108.1| PREDICTED: POU domain, class 3, transcription factor 4 [Canis lupus
familiaris]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|297710446|ref|XP_002831894.1| PREDICTED: POU domain, class 3, transcription factor 4 [Pongo
abelii]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|344281980|ref|XP_003412753.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Loxodonta africana]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|155369223|ref|NP_001094393.1| POU domain, class 3, transcription factor 4-A [Xenopus laevis]
gi|281185477|sp|P31364.2|P3F4A_XENLA RecName: Full=POU domain, class 3, transcription factor 4-A;
AltName: Full=Transcription factor POU2; Short=XlPOU 2;
Short=XlPOU2
gi|632502|gb|AAA92684.1| transcription factor POU2 [Xenopus laevis]
gi|50368775|gb|AAH76747.1| POU 2 protein [Xenopus laevis]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 98/150 (65%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ N + G K++KRTSI K LE +F P+P+
Sbjct: 250 PLLNKWLEEADSSTGNPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAL 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|119226249|ref|NP_035269.2| POU domain, class 2, transcription factor 3 [Mus musculus]
gi|148693602|gb|EDL25549.1| mCG1529 [Mus musculus]
gi|151556704|gb|AAI48605.1| POU domain, class 2, transcription factor 3 [synthetic construct]
Length = 431
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 170 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 226
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 227 ALNLSFKNMCKLKPLLEKWLNDAESSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIE 282
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|74148920|dbj|BAE32148.1| unnamed protein product [Mus musculus]
Length = 419
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 158 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 214
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 215 ALNLSFKNMCKLKPLLEKWLNDAESSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIE 270
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 271 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 320
>gi|266458399|ref|NP_001158054.1| POU domain, class 3, transcription factor 1-A [Xenopus laevis]
gi|671666|emb|CAA41782.1| POU 1 transcription factor [Xenopus laevis]
Length = 356
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 128/228 (56%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG 224
L PMS P+ N HQ ++S S Y ++N M+ HHS P G V P
Sbjct: 106 LAPMS-PSSNSHQPLIYSQSSY-TNLNGMLGPQASSLHHSMRDPLHDDPGVHDTQVDSPP 163
Query: 225 L------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 164 QHLGHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 220
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ + + + G K++KRTSI
Sbjct: 221 ICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVG 277
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 278 VKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 325
>gi|444518988|gb|ELV12489.1| POU domain, class 3, transcription factor 4 [Tupaia chinensis]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|426354073|ref|XP_004044494.1| PREDICTED: POU domain, class 3, transcription factor 2 [Gorilla
gorilla gorilla]
Length = 464
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 280 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 336
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 337 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 393
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 394 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 433
>gi|410988936|ref|XP_004000730.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Felis
catus]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|6679427|ref|NP_032927.1| POU domain, class 3, transcription factor 4 [Mus musculus]
gi|8394003|ref|NP_058948.1| POU domain, class 3, transcription factor 4 [Rattus norvegicus]
gi|50402257|sp|P62516.1|PO3F4_RAT RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4; AltName:
Full=Octamer-binding protein 9; Short=Oct-9; AltName:
Full=Octamer-binding transcription factor 9;
Short=OTF-9; AltName: Full=RHS2 class III POU protein
gi|50402535|sp|P62515.1|PO3F4_MOUSE RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4; AltName:
Full=Octamer-binding protein 9; Short=Oct-9; AltName:
Full=Octamer-binding transcription factor 9; Short=OTF-9
gi|55834|emb|CAA77855.1| brain-4 [Rattus norvegicus]
gi|200449|gb|AAA39962.1| brain-4 class III POU-domain protein [Mus musculus]
gi|206660|gb|AAA42042.1| RHS2 class III POU protein [Rattus norvegicus]
gi|148682074|gb|EDL14021.1| POU domain, class 3, transcription factor 4 [Mus musculus]
gi|148877921|gb|AAI45920.1| POU domain, class 3, transcription factor 4 [Mus musculus]
gi|149055511|gb|EDM07095.1| POU domain, class 3, transcription factor 4 [Rattus norvegicus]
gi|223460308|gb|AAI38658.1| POU domain, class 3, transcription factor 4 [Mus musculus]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|281185476|sp|P31363.2|P3F1A_XENLA RecName: Full=POU domain, class 3, transcription factor 1-A;
AltName: Full=Homeotic protein NRL-22; Short=XlNRL-22;
AltName: Full=Transcription factor POU1; Short=XlPOU 1;
Short=XlPOU1
Length = 375
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 128/228 (56%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG 224
L PMS P+ N HQ ++S S Y ++N M+ HHS P G V P
Sbjct: 125 LAPMS-PSSNSHQPLIYSQSSYT-NLNGMLGPQASSLHHSMRDPLHDDPGVHDTQVDSPP 182
Query: 225 L------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 183 QHLGHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 239
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ + + + G K++KRTSI
Sbjct: 240 ICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVG 296
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 297 VKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 344
>gi|739455|prf||2003279A brn-2 protein
Length = 445
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 105/160 (65%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 261 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 317
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 318 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 374
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+ S ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 375 FLKCPKTSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414
>gi|395520114|ref|XP_003764182.1| PREDICTED: POU domain, class 2, transcription factor 3 [Sarcophilus
harrisii]
Length = 437
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 106/163 (65%), Gaps = 10/163 (6%)
Query: 228 PDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
PD +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 185 PDEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLS 241
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSL 342
NM LKP+L+ WL +AE+ + PS P+ G K++KRTSI + +L
Sbjct: 242 FKNMCKLKPLLEKWLNDAESSPSDSTVS--TPSSYPSLSEVFGRKRKKRTSIETNIRLTL 299
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 300 EKRFQDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRI 342
>gi|50400987|sp|Q812B1.1|PO3F4_MESAU RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4
gi|28194177|gb|AAO33434.1|AF469664_1 POU homeodomain protein [Mesocricetus auratus]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|348532069|ref|XP_003453529.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Oreochromis niloticus]
Length = 381
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/191 (46%), Positives = 116/191 (60%), Gaps = 11/191 (5%)
Query: 199 HHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTD---PRELEAFAERFKQRRIKLGVTQ 255
H HHS L H + H P H +D D +LE FA++FKQRRIKLG TQ
Sbjct: 170 HEDHHSPHLSEHGHPTSQHQHQHRPQSHHDHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQ 229
Query: 256 ADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRD 315
ADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 230 ADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTSGS---- 282
Query: 316 PDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 374
P + + A G K++KRTSI K +LE++F P+P+ +I +A+ L L+K VVRVW
Sbjct: 283 PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEIITLADSLHLEKEVVRVW 342
Query: 375 FCNQRQKQKRM 385
FCN+RQK+KRM
Sbjct: 343 FCNRRQKEKRM 353
>gi|354486940|ref|XP_003505633.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Cricetulus griseus]
gi|344237464|gb|EGV93567.1| POU domain, class 3, transcription factor 4 [Cricetulus griseus]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|291407944|ref|XP_002720190.1| PREDICTED: POU class 3 homeobox 3 [Oryctolagus cuniculus]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|380503872|ref|NP_001244113.1| POU domain, class 3, transcription factor 4 [Equus caballus]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|433288480|ref|NP_000298.3| POU domain, class 3, transcription factor 4 [Homo sapiens]
gi|332861110|ref|XP_003317585.1| PREDICTED: POU domain, class 3, transcription factor 4 [Pan
troglodytes]
gi|397508027|ref|XP_003824476.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Pan
paniscus]
gi|426396551|ref|XP_004064501.1| PREDICTED: POU domain, class 3, transcription factor 4 [Gorilla
gorilla gorilla]
gi|732756|emb|CAA57767.1| Brain 4 [Homo sapiens]
gi|119618983|gb|EAW98577.1| POU domain, class 3, transcription factor 4 [Homo sapiens]
gi|189054618|dbj|BAG37468.1| unnamed protein product [Homo sapiens]
gi|208968683|dbj|BAG74180.1| POU class 3 homeobox 4 [synthetic construct]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|156119461|ref|NP_001095225.1| POU domain, class 3, transcription factor 2-A [Xenopus laevis]
gi|65021|emb|CAA46047.1| POU domain protein [Xenopus laevis]
Length = 382
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 198 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 254
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 255 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 310
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS +I ++A+ L L+K VVRVW CN+RQK+KRM
Sbjct: 311 HFLKCPKPSAPEITSLADSLQLEKEVVRVWCCNRRQKEKRM 351
>gi|18859251|ref|NP_571235.1| POU domain, class 3, transcription factor 2 [Danio rerio]
gi|2495311|sp|P79746.1|PO3F2_DANRE RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=POU domain protein 47; Short=ZP-47
gi|1730455|emb|CAA69211.1| POU domain protein [Danio rerio]
gi|45595617|gb|AAH67373.1| Pou47 protein [Danio rerio]
gi|169153880|emb|CAQ15526.1| POU domain gene 47 [Danio rerio]
Length = 378
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 104/151 (68%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 207 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 263
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ + + P + + A G K++KRTSI K +LE++F P+P+
Sbjct: 264 PLLNKWLEEADSTSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAA 319
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 320 SEITSLADSLQLEKEVVRVWFCNRRQKEKRM 350
>gi|403291602|ref|XP_003936872.1| PREDICTED: POU domain, class 3, transcription factor 4 [Saimiri
boliviensis boliviensis]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|395534674|ref|XP_003775365.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 2, partial [Sarcophilus harrisii]
Length = 291
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/159 (51%), Positives = 108/159 (67%), Gaps = 9/159 (5%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS
Sbjct: 109 DEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLS 165
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYF 346
NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE++F
Sbjct: 166 FKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHF 221
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 222 LKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 260
>gi|302565798|ref|NP_001181188.1| POU domain, class 3, transcription factor 4 [Macaca mulatta]
gi|355704957|gb|EHH30882.1| Octamer-binding transcription factor 9 [Macaca mulatta]
gi|355757508|gb|EHH61033.1| Octamer-binding transcription factor 9 [Macaca fascicularis]
Length = 361
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|350582064|ref|XP_003481187.1| PREDICTED: POU domain, class 3, transcription factor 3-like,
partial [Sus scrofa]
Length = 364
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 175 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 231
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 232 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 287
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 288 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 328
>gi|53515|emb|CAA79222.1| octamer binding protein-11 [Mus musculus]
Length = 403
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 170 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 226
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 227 ALNLSFKNMCKLKPLLEKWLNDAESSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIE 282
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|402891796|ref|XP_003909120.1| PREDICTED: POU domain, class 3, transcription factor 3, partial
[Papio anubis]
Length = 201
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 13/169 (7%)
Query: 223 PGLQ----HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
PGL H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 4 PGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 60
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAA 336
ICRFE+L LS NM LKP+L WLEEA++ + P + + A G K++KRTSI
Sbjct: 61 ICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEV 116
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE++F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 117 SVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 165
>gi|149046264|gb|EDL99157.1| rCG22262 [Rattus norvegicus]
gi|149046265|gb|EDL99158.1| POU domain, class 3, transcription factor 3 [Rattus norvegicus]
Length = 290
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 101 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 157
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 158 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 213
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 214 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 254
>gi|390479986|ref|XP_003735823.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 4-like [Callithrix jacchus]
Length = 361
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|47209822|emb|CAF93259.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/228 (42%), Positives = 130/228 (57%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG 224
L+P+S P N HQ ++S Y ++N+M++ HH P G+ H + P
Sbjct: 152 LSPLS-PASNGHQSLVYSQPGYT-NLNAMLSPQPGSLHHGMRDPLHDDSGSHDHQMESPQ 209
Query: 225 L------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 210 QAFSHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 266
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ N + + G K++KRTSI
Sbjct: 267 ICRFEALQLSFKNMCKLKPLLNKWLEETDS---NTGSPTNLDKIRAQGRKRKKRTSIEVG 323
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I+ +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 324 VKGALENHFLKCPKPSAHEISTLADSLQLEKEVVRVWFCNRRQKEKRM 371
>gi|77416874|sp|P49335.2|PO3F4_HUMAN RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4; AltName:
Full=Octamer-binding protein 9; Short=Oct-9; AltName:
Full=Octamer-binding transcription factor 9; Short=OTF-9
gi|146327186|gb|AAI41562.1| POU class 3 homeobox 4 [synthetic construct]
gi|148921734|gb|AAI46552.1| POU class 3 homeobox 4 [synthetic construct]
Length = 361
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 99/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEGLQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|440902589|gb|ELR53365.1| POU domain, class 3, transcription factor 3, partial [Bos grunniens
mutus]
Length = 197
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 13/169 (7%)
Query: 223 PGLQ----HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
PGL H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 1 PGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 57
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAA 336
ICRFE+L LS NM LKP+L WLEEA++ + P + + A G K++KRTSI
Sbjct: 58 ICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEV 113
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE++F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 114 SVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 162
>gi|402910674|ref|XP_003917985.1| PREDICTED: POU domain, class 3, transcription factor 4 [Papio
anubis]
Length = 338
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 170 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 226
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ + P + + A G K++KRTSI K LE +F P+P+
Sbjct: 227 PLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAA 282
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 283 QEISSLADSLQLEKEVVRVWFCNRRQKEKRM 313
>gi|62858111|ref|NP_001016504.1| POU domain, class 3, transcription factor 1 [Xenopus (Silurana)
tropicalis]
gi|82249324|sp|Q4QQQ7.1|PO3F1_XENTR RecName: Full=POU domain, class 3, transcription factor 1
gi|67867506|gb|AAH98088.1| POU class 3 homeobox 1 [Xenopus (Silurana) tropicalis]
gi|89272042|emb|CAJ82966.1| pou domain class 3 transcription factor 1 [Xenopus (Silurana)
tropicalis]
Length = 375
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 129/228 (56%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGA--THHPVMP 222
L PMS P N HQ ++S S Y ++N M+ HHS P G TH P
Sbjct: 125 LPPMS-PGSNSHQPLIYSQSSYT-NLNGMLGPQASSLHHSMRDPLHDDPGVLDTHVESPP 182
Query: 223 PGLQHPDTDTDPR-----ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
L H +D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 183 QHLSHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 239
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ + + + G K++KRTSI
Sbjct: 240 ICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVG 296
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 297 VKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 344
>gi|395862571|ref|XP_003803516.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Otolemur garnettii]
Length = 361
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ + P + + A G K++KRTSI K LE +F P+P+
Sbjct: 250 PLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAA 305
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 306 QEISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>gi|256070415|ref|XP_002571538.1| transcription factor (fragment) [Schistosoma mansoni]
gi|350645321|emb|CCD59944.1| pou4/brn-3, putative [Schistosoma mansoni]
Length = 380
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 123/241 (51%), Gaps = 47/241 (19%)
Query: 190 MNSMMTGHHHHHH----------HSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEA 239
+NS ++ HHH S P + +H + + P +D L
Sbjct: 130 LNSYISDHHHQCQCDMSSSVWDKWSFLSPINSYHANSDCIIATTKTVQPVGKSDA--LAE 187
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
F FK++RIKLG+TQA+VG+AL L L G G LSQSTICRFESL+LSH NM+ALKP+L+
Sbjct: 188 FVVMFKEKRIKLGITQAEVGRALGTLNLSGFGCLSQSTICRFESLSLSHKNMLALKPVLE 247
Query: 300 AWLEEAE---------------------------AQAKNKRRDPDAPSVLP-------AG 325
WL++ E + + +P LP
Sbjct: 248 LWLQQVEGGLWVNQEHRLQESHNYFNRTSTGSTDSFRNSSNSSTKSPVFLPFTPLKKSVE 307
Query: 326 EKKRKRTSIAAPEKRSLEAYF-AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
++RKRT I EK LE+YF A RP+ +++ +A +L++ KNV+RVWFCNQ QK KR
Sbjct: 308 SQRRKRTCIMGKEKYILESYFNATDCRPTSDQMNELALRLNMPKNVIRVWFCNQHQKHKR 367
Query: 385 M 385
+
Sbjct: 368 L 368
>gi|432907549|ref|XP_004077648.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Oryzias latipes]
Length = 404
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 120/198 (60%), Gaps = 25/198 (12%)
Query: 199 HHHHHS------GALPASHHHG---ATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRR 248
H HHS G P+ H H +HH H D DT +LE FA++FKQRR
Sbjct: 193 HEEHHSPHLSEHGHPPSQHQHQHRPQSHH-------DHSDEDTPTSDDLEQFAKQFKQRR 245
Query: 249 IKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ 308
IKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++
Sbjct: 246 IKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADST 302
Query: 309 AKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 367
+ + P + + A G K++KRTSI K +LE++F P+P+ +I ++A+ L L+
Sbjct: 303 SGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEIISLADNLHLE 358
Query: 368 KNVVRVWFCNQRQKQKRM 385
K VVRVWFCN+RQK+KRM
Sbjct: 359 KEVVRVWFCNRRQKEKRM 376
>gi|431895603|gb|ELK05036.1| POU domain, class 3, transcription factor 3 [Pteropus alecto]
Length = 266
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 77 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 133
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 134 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 189
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 190 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 230
>gi|380807109|gb|AFE75430.1| POU domain, class 3, transcription factor 3, partial [Macaca
mulatta]
gi|380807111|gb|AFE75431.1| POU domain, class 3, transcription factor 3, partial [Macaca
mulatta]
Length = 288
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 107 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 163
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 164 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 219
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 220 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 260
>gi|301299075|gb|ADK66882.1| Oct1/2 transcription factor [Paracentrotus lividus]
gi|333362450|gb|AEF30405.1| Oct1/2 [Paracentrotus lividus]
Length = 802
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 106/166 (63%), Gaps = 17/166 (10%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
H + TD ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 463 HVEEQTDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNL 519
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVL-----PAG--EKKRKRTSIAAPEK 339
S NM LKP+LQ WL++A+ N P++L P G +++KRTSI +
Sbjct: 520 SFKNMCKLKPLLQKWLDDADTTVAN-------PALLGPHNSPEGINRRRKKRTSIETNIR 572
Query: 340 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
SLE F QP+P+ E+IA + E+L ++K VVRVWFCN+RQK+KR+
Sbjct: 573 ISLEKSFLTQPKPTSEEIAILGEQLGMEKEVVRVWFCNRRQKEKRI 618
>gi|395843226|ref|XP_003794396.1| PREDICTED: POU domain, class 3, transcription factor 3, partial
[Otolemur garnettii]
Length = 264
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 75 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 131
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 132 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 187
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 188 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 228
>gi|149041421|gb|EDL95262.1| POU domain, class 2, transcription factor 3, isoform CRA_b [Rattus
norvegicus]
Length = 348
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 88 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 144
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 145 ALNLSFKNMCKLKPLLEKWLNDAESSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIE 200
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 201 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 250
>gi|291386169|ref|XP_002710046.1| PREDICTED: POU class 3 homeobox 3 [Oryctolagus cuniculus]
Length = 296
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 107 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 163
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 164 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 219
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 220 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 260
>gi|477686|pir||B46216 transcription factor Skn-1, splice form i - rat
Length = 348
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 88 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 144
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 145 ALNLSFKNMCKLKPLLEKWLNDAESSPA----DPSASTPSSYPTLSEVFGRKRKKRTSIE 200
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 201 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 250
>gi|426235133|ref|XP_004011545.1| PREDICTED: POU domain, class 3, transcription factor 2, partial
[Ovis aries]
Length = 222
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 109/162 (67%), Gaps = 9/162 (5%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 37 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 93
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLE 343
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE
Sbjct: 94 QLSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALE 149
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 150 SHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 191
>gi|432931272|ref|XP_004081634.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Oryzias latipes]
Length = 369
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 105/161 (65%), Gaps = 9/161 (5%)
Query: 228 PDTDTD---PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
P +D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 139 PQSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 195
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + G K++KRTSI K +LE+
Sbjct: 196 QLSFKNMCKLKPLLNKWLEEADSTTGSP---TSIDKIATQGRKRKKRTSIEVSVKGALES 252
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 253 HFLKCPKPSAQEINSLADTLQLEKEVVRVWFCNRRQKEKRM 293
>gi|332239805|ref|XP_003269089.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 4 [Nomascus leucogenys]
Length = 394
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 103/151 (68%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 226 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 282
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ + P + + A G K++KRTSI K LE +F P+P+
Sbjct: 283 PLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAA 338
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 339 QEISSLADSLQLEKEVVRVWFCNRRQKEKRM 369
>gi|283820|pir||S23249 transcription factor POU2 - African clawed frog (fragment)
Length = 235
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 101/151 (66%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 67 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 123
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ N P + + A G K++KRTSI K LE +F P+P+
Sbjct: 124 PLLNKWLEEADSSTGN----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAA 179
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 180 LEITSLADSLQLEKEVVRVWFCNRRQKEKRM 210
>gi|291383799|ref|XP_002708409.1| PREDICTED: POU transcription factor [Oryctolagus cuniculus]
Length = 449
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 106/165 (64%), Gaps = 14/165 (8%)
Query: 228 PDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
PD +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 195 PDEPSDLEELERFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLS 251
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKR 340
NM LKP+L+ WL +AE+ DP PS P G K++KRTSI +
Sbjct: 252 FKNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPTLSEVFGRKRKKRTSIETNIRL 307
Query: 341 SLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 308 TLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 352
>gi|348570460|ref|XP_003471015.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Cavia
porcellus]
Length = 360
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 99/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 192 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 248
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA+ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 249 PLLNKWLEEADLSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 305
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 306 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 335
>gi|351705894|gb|EHB08813.1| POU domain, class 2, transcription factor 3 [Heterocephalus glaber]
Length = 426
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 173 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 229
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP APS P G K++KRTSI + +
Sbjct: 230 KNMCKLKPLLEKWLNDAESSPS----DPSVSAPSSYPTLNEVFGRKRKKRTSIETNIRLT 285
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 286 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 329
>gi|123405|sp|P20267.2|PO3F1_RAT RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=Octamer-binding protein 6; Short=Oct-6; AltName:
Full=Octamer-binding transcription factor 6;
Short=OTF-6; AltName: Full=POU domain transcription
factor SCIP; AltName: Full=Tst-1
Length = 451
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>gi|20301972|ref|NP_620193.1| POU domain, class 3, transcription factor 1 [Rattus norvegicus]
gi|206867|gb|AAA42118.1| SCIP [Rattus norvegicus]
Length = 451
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>gi|307203154|gb|EFN82333.1| POU domain, class 2, transcription factor 1 [Harpegnathos saltator]
Length = 529
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 109/170 (64%), Gaps = 13/170 (7%)
Query: 222 PPGLQ-HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
PP L PD TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI R
Sbjct: 291 PPRLDPSPDETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISR 347
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA---PSVLP--AGEKKRKRTSIA 335
FE+L LS NM LKP+LQ WLE+A+ N +P++ P P G +++KRTSI
Sbjct: 348 FEALNLSFKNMCKLKPLLQKWLEDAD----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIE 403
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+P+ E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 404 TSVRVALEKAFIQNPKPTSEEITILADSLAMEKEVVRVWFCNRRQKEKRI 453
>gi|671667|emb|CAA41781.1| POU 2 transcription factor [Xenopus laevis]
Length = 218
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 101/151 (66%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 50 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 106
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ N P + + A G K++KRTSI K LE +F P+P+
Sbjct: 107 PLLNKWLEEADSSTGN----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAA 162
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 163 LEITSLADSLQLEKEVVRVWFCNRRQKEKRM 193
>gi|359321259|ref|XP_003639548.1| PREDICTED: POU domain, class 3, transcription factor 1-like [Canis
lupus familiaris]
Length = 447
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 248 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 304
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 305 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 361
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 362 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 406
>gi|358414345|ref|XP_001787898.2| PREDICTED: uncharacterized protein LOC526152 [Bos taurus]
Length = 937
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 748 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 804
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 805 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 860
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 861 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 901
>gi|291408748|ref|XP_002720688.1| PREDICTED: POU domain, class 3, transcription factor 1 [Oryctolagus
cuniculus]
Length = 465
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 254 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 310
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 311 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 367
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 368 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 412
>gi|157168331|ref|NP_001096655.1| POU domain, class 3, transcription factor 1-B [Xenopus laevis]
gi|82177950|sp|Q561L5.1|P3F1B_XENLA RecName: Full=POU domain, class 3, transcription factor 1-B;
AltName: Full=Homeotic protein NRL-34; Short=XlNRL-34;
AltName: Full=Homeotic protein NRL-34-A
gi|62533219|gb|AAH93556.1| Nrl34-A protein [Xenopus laevis]
Length = 375
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 102/160 (63%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 191 HSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 247
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEE ++ + + + G K++KRTSI K +LE +
Sbjct: 248 LSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENH 304
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 305 FLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 344
>gi|395527192|ref|XP_003765734.1| PREDICTED: POU domain, class 3, transcription factor 3 [Sarcophilus
harrisii]
Length = 311
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 122 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 178
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 179 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 234
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 235 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 275
>gi|431904020|gb|ELK09455.1| POU domain, class 2, transcription factor 3 [Pteropus alecto]
Length = 714
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/254 (40%), Positives = 133/254 (52%), Gaps = 27/254 (10%)
Query: 145 QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS 204
+MS D + ++IS T L P P P GP + S G
Sbjct: 122 KMSGDVADSTDARNAISQVETGLQPNLLPFPQQQSSLLLPQTGPGLTSQAIGRP------ 175
Query: 205 GALPASH---HHGATHHPVMP---PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADV 258
LP S H + H +P P D +D ELE FA+ FKQRRIKLG TQ DV
Sbjct: 176 -GLPGSSLEPHLEVSQHLSVPKHLPSSGGADEPSDLEELEKFAKTFKQRRIKLGFTQGDV 234
Query: 259 GKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA 318
G A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+ DP
Sbjct: 235 GLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAESSPS----DPSV 287
Query: 319 --PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L ++K VV
Sbjct: 288 STPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVV 347
Query: 372 RVWFCNQRQKQKRM 385
RVWFCN+RQK+KR+
Sbjct: 348 RVWFCNRRQKEKRI 361
>gi|432910407|ref|XP_004078350.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Oryzias latipes]
Length = 375
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 101/160 (63%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 191 HSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 247
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEE ++ N + + G K++KRTSI K +LE +
Sbjct: 248 LSFKNMCKLKPLLNKWLEETDS---NTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENH 304
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS +I+ +A L L+K VVRVWFCN+RQK+KRM
Sbjct: 305 FLKCPKPSAHEISTLAGTLQLEKEVVRVWFCNRRQKEKRM 344
>gi|148664218|ref|NP_055167.2| POU domain, class 2, transcription factor 3 isoform 1 [Homo
sapiens]
gi|311033416|sp|Q9UKI9.3|PO2F3_HUMAN RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Octamer-binding protein 11; Short=Oct-11; AltName:
Full=Octamer-binding transcription factor 11;
Short=OTF-11; AltName: Full=Transcription factor PLA-1;
AltName: Full=Transcription factor Skn-1
gi|75517190|gb|AAI01650.1| POU class 2 homeobox 3 [Homo sapiens]
gi|167773585|gb|ABZ92227.1| POU class 2 homeobox 3 [synthetic construct]
Length = 436
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 121/212 (57%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S GH LP S H + H PV P D +D ELE F
Sbjct: 142 GPGLASQAFGHP-------GLPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKF 194
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 195 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 251
Query: 301 WLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP PS P+ G K++KRTSI + +LE F P+PS
Sbjct: 252 WLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 307
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 308 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|7106383|ref|NP_035271.1| POU domain, class 3, transcription factor 1 [Mus musculus]
gi|123404|sp|P21952.1|PO3F1_MOUSE RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=Octamer-binding protein 6; Short=Oct-6; AltName:
Full=Octamer-binding transcription factor 6;
Short=OTF-6; AltName: Full=POU domain transcription
factor SCIP
gi|49682|emb|CAA40280.1| POU-domain transcription factor [Mus musculus domesticus]
gi|53506|emb|CAA38445.1| octomer binding protein [Mus musculus]
gi|200451|gb|AAA39963.1| scip class III POU-domain protein [Mus musculus]
gi|225000344|gb|AAI72630.1| POU domain, class 3, transcription factor 1 [synthetic construct]
gi|225001034|gb|AAI72733.1| POU domain, class 3, transcription factor 1 [synthetic construct]
Length = 449
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 241 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 297
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 298 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 354
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 355 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 399
>gi|53508|emb|CAA40720.1| octamer binding protein [Mus musculus]
Length = 448
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 240 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 296
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 297 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 353
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 354 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 398
>gi|5882207|gb|AAD55245.1|AF133895_1 POU domain transcription factor OCT11a [Homo sapiens]
Length = 436
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 121/212 (57%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S GH LP S H + H PV P D +D ELE F
Sbjct: 142 GPGLASQAFGHP-------GLPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKF 194
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 195 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 251
Query: 301 WLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP PS P+ G K++KRTSI + +LE F P+PS
Sbjct: 252 WLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 307
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 308 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|2506533|sp|P31362.2|PO2F3_MOUSE RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Epoc-1; AltName: Full=Octamer-binding protein 11;
Short=Oct-11; AltName: Full=Octamer-binding
transcription factor 11; Short=OTF-11
gi|388914|gb|AAA16855.1| base pairs 945-995 correspond to helical domain 3 of the protein
[Mus musculus]
Length = 431
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 170 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 226
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL + E+ DP A PS P G K++KRTSI
Sbjct: 227 ALNLSFKNMCKLKPLLEKWLNDPESSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIE 282
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|110624765|ref|NP_002690.3| POU domain, class 3, transcription factor 1 [Homo sapiens]
gi|218512119|sp|Q03052.3|PO3F1_HUMAN RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=Octamer-binding protein 6; Short=Oct-6; AltName:
Full=Octamer-binding transcription factor 6;
Short=OTF-6; AltName: Full=POU domain transcription
factor SCIP
gi|119627703|gb|EAX07298.1| POU domain, class 3, transcription factor 1 [Homo sapiens]
gi|162318522|gb|AAI56295.1| POU class 3 homeobox 1 [synthetic construct]
Length = 451
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>gi|402854006|ref|XP_003919516.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 1 [Papio anubis]
Length = 451
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>gi|426370777|ref|XP_004052336.1| PREDICTED: POU domain, class 2, transcription factor 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSTYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|157428026|ref|NP_001098921.1| POU domain, class 3, transcription factor 1 [Bos taurus]
gi|157278967|gb|AAI53280.1| POU3F1 protein [Bos taurus]
Length = 451
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>gi|363732612|ref|XP_003641125.1| PREDICTED: POU domain, class 3, transcription factor 4-like,
partial [Gallus gallus]
Length = 213
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 44 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 100
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K LE
Sbjct: 101 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLET 156
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 157 HFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 197
>gi|348526119|ref|XP_003450568.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Oreochromis niloticus]
Length = 374
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 100/160 (62%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 190 HSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 246
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEE ++ N + + G K++KRTSI K +LE +
Sbjct: 247 LSFKNMCKLKPLLNKWLEETDS---NTGSPTNLDKIAAQGRKRKKRTSIEVAVKGALENH 303
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS +I+ +A L L K VVRVWFCN+RQK+KRM
Sbjct: 304 FLKCPKPSAHEISTLAGTLQLDKEVVRVWFCNRRQKEKRM 343
>gi|508990|gb|AAA59965.1| oct-6 [Homo sapiens]
Length = 448
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 240 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 296
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 297 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 353
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 354 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 398
>gi|42542928|gb|AAH66419.1| POU domain gene 50 [Danio rerio]
Length = 368
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 97/150 (64%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 194 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 250
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEE ++ N + + G K++KRTSI K +LE +F P+PS
Sbjct: 251 PLLNKWLEETDS---NTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAH 307
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I +A L L+K VVRVWFCN+RQK+KRM
Sbjct: 308 EITTLAGTLQLEKEVVRVWFCNRRQKEKRM 337
>gi|18859253|ref|NP_571236.1| POU domain, class 3, transcription factor 1 [Danio rerio]
gi|2495312|sp|Q90482.1|PO3F1_DANRE RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=POU domain protein 50; Short=ZP-50
gi|1418692|emb|CAA65282.1| POU domain protein [Danio rerio]
gi|37194658|gb|AAH58306.1| POU domain gene 50 [Danio rerio]
Length = 368
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 97/150 (64%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 194 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 250
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEE ++ N + + G K++KRTSI K +LE +F P+PS
Sbjct: 251 PLLNKWLEETDS---NTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAH 307
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I +A L L+K VVRVWFCN+RQK+KRM
Sbjct: 308 EITTLAGTLQLEKEVVRVWFCNRRQKEKRM 337
>gi|347658964|ref|NP_001231611.1| POU domain, class 2, transcription factor 3 isoform 2 [Homo
sapiens]
Length = 438
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 121/212 (57%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S GH LP S H + H PV P D +D ELE F
Sbjct: 144 GPGLASQAFGHP-------GLPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKF 196
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 197 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 253
Query: 301 WLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP PS P+ G K++KRTSI + +LE F P+PS
Sbjct: 254 WLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 309
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 310 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 341
>gi|296488938|tpg|DAA31051.1| TPA: POU domain, class 3, transcription factor 1 [Bos taurus]
Length = 432
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>gi|281338116|gb|EFB13700.1| hypothetical protein PANDA_001356 [Ailuropoda melanoleuca]
Length = 500
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 311 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 367
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 368 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 423
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 424 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 464
>gi|348574063|ref|XP_003472810.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Cavia
porcellus]
Length = 430
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 120/212 (56%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPASH---HHGATHHPVMP---PGLQHPDTDTDPRELEAF 240
GPS+ S G LP S H A+ H P P D +D ELE F
Sbjct: 136 GPSLASQAVGR-------SGLPGSSLEPHLEASQHLPAPKHLPSSAGADEPSDLEELEKF 188
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 189 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 245
Query: 301 WLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP PS P G K++KRTSI + +LE F P+PS
Sbjct: 246 WLNDAESSPS----DPSVSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 301
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 302 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 333
>gi|35134|emb|CAA79158.1| Oct-6 transcription factor [Homo sapiens]
Length = 398
Score = 154 bits (388), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 190 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 246
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 247 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 303
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 304 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 348
>gi|241737313|ref|XP_002414009.1| pou2, putative [Ixodes scapularis]
gi|215507863|gb|EEC17317.1| pou2, putative [Ixodes scapularis]
Length = 425
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 109/172 (63%), Gaps = 8/172 (4%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
HH P P+ TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+
Sbjct: 168 HHVKSRPAEPSPEEMTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQT 224
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA---PSVLPAGEKKRKRTS 333
TI RFE+L LS NM LKP+LQ WLE+A+A N +A P + G +++KRTS
Sbjct: 225 TISRFEALNLSFKNMCKLKPLLQRWLEDADASLNNPAALANAHTTPESI--GRRRKKRTS 282
Query: 334 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I + +LE F P+P+ E+IA +AE L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 IETSVRVALEKAFVQNPKPTSEEIAVLAEGLSMEKEVVRVWFCNRRQKEKRI 334
>gi|194378808|dbj|BAG63569.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 121/212 (57%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S GH LP S H + H PV P D +D ELE F
Sbjct: 144 GPGLASQAFGHP-------GLPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKF 196
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 197 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 253
Query: 301 WLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP PS P+ G K++KRTSI + +LE F P+PS
Sbjct: 254 WLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 309
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 310 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 341
>gi|426336705|ref|XP_004031602.1| PREDICTED: uncharacterized protein LOC101153675 [Gorilla gorilla
gorilla]
Length = 550
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 361 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 417
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 418 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 473
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 474 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 514
>gi|395848433|ref|XP_003796855.1| PREDICTED: POU domain, class 2, transcription factor 3 [Otolemur
garnettii]
Length = 436
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 105/165 (63%), Gaps = 14/165 (8%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 186 TDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNM 242
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEA 344
LKP+L+ WL +AE+ DP PS P G K++KRTSI + +LE
Sbjct: 243 CKLKPLLEKWLNDAESSPS----DPSGSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEK 298
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+ +
Sbjct: 299 RFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCSV 343
>gi|207540|gb|AAA42303.1| POU domain protein, partial [Rattus norvegicus]
Length = 417
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 209 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 265
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 266 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 322
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 323 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 367
>gi|397480973|ref|XP_003811733.1| PREDICTED: uncharacterized protein LOC100968326 [Pan paniscus]
Length = 726
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 537 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 593
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 594 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 649
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 650 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 690
>gi|410914814|ref|XP_003970882.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 2, transcription
factor 3-like [Takifugu rubripes]
Length = 385
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/182 (46%), Positives = 111/182 (60%), Gaps = 7/182 (3%)
Query: 208 PASHHHGATHHPVMPPGLQHP--DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANL 265
P +H H MP + P + +D ELE FA+ FKQRRIKLG TQ DVG A+
Sbjct: 123 PPMENHMDMSHLQMPKHMSVPPQEEPSDLEELEQFAKAFKQRRIKLGFTQGDVGLAMG-- 180
Query: 266 KLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLP 323
KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +P P +
Sbjct: 181 KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSDSMSNPTTMPPLIEG 239
Query: 324 AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 383
G K++KRTSI K +LE F P+P+ E+I I+E+L ++K VVRVWFCN+RQK+K
Sbjct: 240 YGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEITLISEQLSMEKEVVRVWFCNRRQKEK 299
Query: 384 RM 385
R+
Sbjct: 300 RI 301
>gi|147900063|ref|NP_001086347.1| POU domain, class 3, transcription factor 4-B [Xenopus laevis]
gi|82183641|sp|Q6DJN3.1|P3F4B_XENLA RecName: Full=POU domain, class 3, transcription factor 4-B
gi|49522099|gb|AAH75142.1| MGC81954 protein [Xenopus laevis]
Length = 356
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 98/150 (65%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA+ FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 188 ELEQFAKLFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 244
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+
Sbjct: 245 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAL 301
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 302 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 331
>gi|440904909|gb|ELR55361.1| POU domain, class 2, transcription factor 3, partial [Bos grunniens
mutus]
Length = 433
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 120/212 (56%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S G LP S H + H PV P D +D ELE F
Sbjct: 139 GPGLTSQAVGRP-------GLPGSSLEPHLEASQHLPVPKHLPSAGGADEPSDLEELEKF 191
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 192 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 248
Query: 301 WLEEAEAQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP P+ PA G K++KRTSI + +LE F P+PS
Sbjct: 249 WLNDAESSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 304
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 305 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 336
>gi|297269406|ref|XP_001100709.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Macaca
mulatta]
gi|402895555|ref|XP_003910890.1| PREDICTED: POU domain, class 2, transcription factor 3 [Papio
anubis]
gi|355567142|gb|EHH23521.1| hypothetical protein EGK_06998 [Macaca mulatta]
gi|355752718|gb|EHH56838.1| hypothetical protein EGM_06322 [Macaca fascicularis]
Length = 436
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|126330193|ref|XP_001364853.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Monodelphis domestica]
Length = 446
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 235 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 291
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + G K++KRTSI K +LE+
Sbjct: 292 QLSFKNMCKLKPLLNKWLEETDSSTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 348
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 349 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 393
>gi|6002919|gb|AAF00199.1|AF162278_1 Skn-1a/Epoc-1/Oct-11 POU transcription factor [Homo sapiens]
Length = 436
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|170595354|ref|XP_001902346.1| Homeobox protein ceh-6 [Brugia malayi]
gi|158590024|gb|EDP28805.1| Homeobox protein ceh-6, putative [Brugia malayi]
Length = 414
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 111/184 (60%), Gaps = 6/184 (3%)
Query: 204 SGALPASHHHGATHH--PVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
S A P+S + P+ L T +LEAFA+ FKQRRIKLG TQADVG A
Sbjct: 212 SAAAPSSWPYAFAQEDLPLSSSQLADETDSTCSEDLEAFAKTFKQRRIKLGYTQADVGLA 271
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
L L SQ+TICRFE+L LS NM LKP+L WLEEA++ + + + +
Sbjct: 272 LGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSSPNSAFEKMTG 328
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
G K++KRTSI K LE +F P+P+ ++IA +A +L L+K VVRVWFCN+RQK
Sbjct: 329 -QGGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEIAQVAMELQLEKEVVRVWFCNRRQK 387
Query: 382 QKRM 385
+KRM
Sbjct: 388 EKRM 391
>gi|410954584|ref|XP_003983944.1| PREDICTED: POU domain, class 3, transcription factor 3 [Felis
catus]
Length = 333
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 74 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 130
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 131 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 186
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 187 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 227
>gi|224097364|ref|XP_002186623.1| PREDICTED: POU domain, class 3, transcription factor 4 [Taeniopygia
guttata]
Length = 220
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D +T ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 42 HSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 98
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K LE
Sbjct: 99 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLET 154
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 155 HFLKCPKPAAQEISSLADSLQLEKEVVRVWFCNRRQKEKRM 195
>gi|332208478|ref|XP_003253332.1| PREDICTED: POU domain, class 2, transcription factor 3 [Nomascus
leucogenys]
Length = 436
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|281347824|gb|EFB23408.1| hypothetical protein PANDA_001963 [Ailuropoda melanoleuca]
Length = 390
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 105/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 150 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 206
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE DP + PS P G K++KRTSI + +
Sbjct: 207 KNMCKLKPLLEKWLHDAETSPS----DPSMNTPSSFPTLSEVFGRKRKKRTSIETNIRLT 262
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 263 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 306
>gi|329663363|ref|NP_001192759.1| POU domain, class 2, transcription factor 3 [Bos taurus]
gi|296480158|tpg|DAA22273.1| TPA: PLA-1 protein-like [Bos taurus]
Length = 440
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 120/212 (56%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S G LP S H + H PV P D +D ELE F
Sbjct: 146 GPGLTSQAVGRP-------GLPGSSLEPHLEASQHLPVPKHLPSAGGADEPSDLEELEKF 198
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 199 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 255
Query: 301 WLEEAEAQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP P+ PA G K++KRTSI + +LE F P+PS
Sbjct: 256 WLNDAESSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 311
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 312 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 343
>gi|403262551|ref|XP_003923641.1| PREDICTED: POU domain, class 2, transcription factor 3 [Saimiri
boliviensis boliviensis]
Length = 442
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 189 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 245
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 246 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 301
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 302 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 345
>gi|410972093|ref|XP_003992495.1| PREDICTED: POU domain, class 2, transcription factor 3 [Felis
catus]
Length = 423
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 104/164 (63%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 171 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 227
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE DP PS P G K++KRTSI + +
Sbjct: 228 KNMCKLKPLLEKWLHDAETSPS----DPSGSTPSSFPTLSEVFGRKRKKRTSIETNIRLT 283
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 284 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 327
>gi|397498528|ref|XP_003820033.1| PREDICTED: POU domain, class 2, transcription factor 3 [Pan
paniscus]
Length = 436
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|119587907|gb|EAW67503.1| POU domain, class 2, transcription factor 3 [Homo sapiens]
Length = 436
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|344287239|ref|XP_003415361.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 1-like [Loxodonta africana]
Length = 536
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 328 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 384
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 385 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 441
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 442 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 486
>gi|158257418|dbj|BAF84682.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|345317911|ref|XP_001518292.2| PREDICTED: POU domain, class 3, transcription factor 3-like,
partial [Ornithorhynchus anatinus]
Length = 289
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 134 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 190
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 191 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 246
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 247 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 287
>gi|5123781|emb|CAB45383.1| PLA-1 protein [Homo sapiens]
Length = 436
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|345778568|ref|XP_539052.3| PREDICTED: uncharacterized protein LOC481931 [Canis lupus
familiaris]
Length = 740
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 556 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 612
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 613 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 668
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 669 HFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 709
>gi|296216413|ref|XP_002754486.1| PREDICTED: POU domain, class 2, transcription factor 3 isoform 2
[Callithrix jacchus]
Length = 442
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 189 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 245
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P+ G K++KRTSI + +
Sbjct: 246 KNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLT 301
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 302 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 345
>gi|449266129|gb|EMC77236.1| POU domain, class 3, transcription factor 2, partial [Columba
livia]
Length = 157
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 105/151 (69%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 1 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 57
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ + + P + + A G K++KRTSI K +LE++F P+PS
Sbjct: 58 PLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSA 113
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 114 QEITSLADSLQLEKEVVRVWFCNRRQKEKRM 144
>gi|402216190|gb|AFQ35836.1| POU class 2 homeobox 3 transcript variant 1 [Ovis aries]
Length = 429
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 120/212 (56%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S G LP S H + H PV P D +D ELE F
Sbjct: 135 GPGLTSQAVGRP-------GLPGSSLEPHLEASQHLPVPKHLPSAGGADEPSDLEELEKF 187
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 188 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 244
Query: 301 WLEEAEAQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP P+ PA G K++KRTSI + +LE F P+PS
Sbjct: 245 WLNDAESSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 300
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 301 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|301756548|ref|XP_002914119.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Ailuropoda melanoleuca]
Length = 435
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 105/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE DP + PS P G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLHDAETSPS----DPSMNTPSSFPTLSEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|84374238|gb|ABC58219.1| transcription factor OctB, partial [Oikopleura dioica]
Length = 255
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 114/220 (51%), Gaps = 14/220 (6%)
Query: 173 PTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL------Q 226
P+ + S Y M++ H + H++ S H L Q
Sbjct: 20 PSSAASGIGGDSWYASQMSAAGVAAHPYSHYTNPYTGSALGAGLHDSFAAQNLFSLGDDQ 79
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
P TD +LE FA FKQ+RIKLG TQADVG AL L SQ+TICRFE+L L
Sbjct: 80 QPSTD----DLERFARDFKQKRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQL 132
Query: 287 SHNNMIALKPILQAWLEEAE-AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
S NM LKP+L WL+EA+ A D + G K++KRTSI K +LE
Sbjct: 133 SFKNMCKLKPLLSRWLDEADSATGGMPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEME 192
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F QP+PS +I AE L L+K VVRVWFCN+RQK KR+
Sbjct: 193 FIKQPKPSAAEITNTAESLQLEKEVVRVWFCNRRQKAKRL 232
>gi|23893421|emb|CAD12362.1| nubbin [Cupiennius salei]
Length = 290
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 113/190 (59%), Gaps = 12/190 (6%)
Query: 205 GALPAS-------HHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQAD 257
G LPA+ + HH P P+ TD ELE FA+ FKQRRIKLG TQ D
Sbjct: 35 GQLPANMQAQLYLQNQSPVHHTKPRPTEPSPEEMTDLEELEQFAKTFKQRRIKLGFTQGD 94
Query: 258 VGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD 317
VG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+A N
Sbjct: 95 VGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQRWLEDADASLSNPHSSLA 151
Query: 318 APSVLP--AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWF 375
+ P G +++KRTSI + +LE F P+P+ E+IA +AE L ++K VVRVWF
Sbjct: 152 SAHTTPESIGRRRKKRTSIETTVRLALEKAFLQNPKPTSEEIAMLAESLAMEKEVVRVWF 211
Query: 376 CNQRQKQKRM 385
CN+RQK+KR+
Sbjct: 212 CNRRQKEKRI 221
>gi|426244694|ref|XP_004016155.1| PREDICTED: POU domain, class 2, transcription factor 3 [Ovis aries]
gi|402216192|gb|AFQ35837.1| POU class 2 homeobox 3 transcript variant 2 [Ovis aries]
Length = 396
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 120/212 (56%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S G LP S H + H PV P D +D ELE F
Sbjct: 102 GPGLTSQAVGRP-------GLPGSSLEPHLEASQHLPVPKHLPSAGGADEPSDLEELEKF 154
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 155 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 211
Query: 301 WLEEAEAQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP P+ PA G K++KRTSI + +LE F P+PS
Sbjct: 212 WLNDAESSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 267
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 268 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 299
>gi|431891064|gb|ELK01941.1| POU domain, class 3, transcription factor 1 [Pteropus alecto]
Length = 275
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 67 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 123
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 124 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 180
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 181 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 225
>gi|400834|sp|P31370.1|POU1_DUGJA RecName: Full=POU domain protein 1; Short=DjPOU1
gi|217312|dbj|BAA02308.1| DjPOU1 [Dugesia japonica]
Length = 559
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 102/151 (67%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA+ FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM L+
Sbjct: 266 DLEQFAKMFKQRRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLR 322
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSG 354
P+LQ WL EA++ +++ P + A +KRK RTSI A K LE+ F +PS
Sbjct: 323 PLLQKWLHEADSSSES----PTNFDKISAQSRKRKKRTSIEANVKSILESSFMKLSKPSA 378
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ I+++AEKL L+K VVRVWFCN+RQK+KR+
Sbjct: 379 QDISSLAEKLSLEKEVVRVWFCNRRQKEKRI 409
>gi|402576763|gb|EJW70721.1| hypothetical protein WUBG_18372, partial [Wuchereria bancrofti]
Length = 246
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 85/184 (46%), Positives = 111/184 (60%), Gaps = 6/184 (3%)
Query: 204 SGALPASHHHGATHH--PVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
S A P+S + P+ L T +LEAFA+ FKQRRIKLG TQADVG A
Sbjct: 44 SAAAPSSWPYAFAQEDLPLSSSQLADETDSTCSEDLEAFAKTFKQRRIKLGYTQADVGLA 103
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
L L SQ+TICRFE+L LS NM LKP+L WLEEA++ + + + +
Sbjct: 104 LGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSSPNSAFEKMTG 160
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
G K++KRTSI K LE +F P+P+ ++IA +A +L L+K VVRVWFCN+RQK
Sbjct: 161 -QGGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEIAQVAMELQLEKEVVRVWFCNRRQK 219
Query: 382 QKRM 385
+KRM
Sbjct: 220 EKRM 223
>gi|301755404|ref|XP_002913559.1| PREDICTED: hypothetical protein LOC100477950 [Ailuropoda
melanoleuca]
Length = 420
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/181 (49%), Positives = 113/181 (62%), Gaps = 17/181 (9%)
Query: 208 PASHHHGA-THHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANL 265
PA GA H P H D DT +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 218 PAETQTGAGCHDP-------HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTL 270
Query: 266 KLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA- 324
SQ+TICRFE+L LS NM LKP+L WLEEA++ + P + + A
Sbjct: 271 Y---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQ 323
Query: 325 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
G K++KRTSI K +LE++F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KR
Sbjct: 324 GRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKR 383
Query: 385 M 385
M
Sbjct: 384 M 384
>gi|395853143|ref|XP_003799076.1| PREDICTED: POU domain, class 3, transcription factor 1 [Otolemur
garnettii]
Length = 434
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 226 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 282
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 283 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 339
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 340 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 384
>gi|350585905|ref|XP_003356366.2| PREDICTED: POU domain, class 3, transcription factor 1, partial
[Sus scrofa]
Length = 332
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 105/164 (64%), Gaps = 7/164 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 125 HSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 181
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE++
Sbjct: 182 LSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESH 238
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 239 FLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 282
>gi|324517750|gb|ADY46910.1| Homeobox protein ceh-6 [Ascaris suum]
Length = 300
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/184 (46%), Positives = 114/184 (61%), Gaps = 8/184 (4%)
Query: 205 GALPASHHHGATHHPVMPPGLQHPDTDTDP---RELEAFAERFKQRRIKLGVTQADVGKA 261
A P+S + + + Q PD D+D +LEAFA+ FKQRRIKLG TQADVG A
Sbjct: 99 SAAPSSWPYTFSQEDIALSSTQLPD-DSDSTCSEDLEAFAKTFKQRRIKLGYTQADVGLA 157
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
L L SQ+TICRFE+L LS NM LKP+L WLEEA++ + + + +
Sbjct: 158 LGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSSPNSAFEKMTG 214
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
G K++KRTSI K LE +F P+P+ ++IA +A +L L+K VVRVWFCN+RQK
Sbjct: 215 Q-GGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEIAQVAVELQLEKEVVRVWFCNRRQK 273
Query: 382 QKRM 385
+KRM
Sbjct: 274 EKRM 277
>gi|297480131|ref|XP_002691240.1| PREDICTED: uncharacterized protein LOC100337252 [Bos taurus]
gi|296482774|tpg|DAA24889.1| TPA: POU class 3 homeobox 3-like [Bos taurus]
Length = 649
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 460 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 516
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 517 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 572
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 573 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 613
>gi|344284041|ref|XP_003413779.1| PREDICTED: hypothetical protein LOC100669674 [Loxodonta africana]
Length = 528
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/169 (50%), Positives = 110/169 (65%), Gaps = 13/169 (7%)
Query: 223 PGLQ----HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
PGL H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 331 PGLNSHDPHSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 387
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAA 336
ICRFE+L LS NM LKP+L WLEEA++ + P + + A G K++KRTSI
Sbjct: 388 ICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEV 443
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE++F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 444 SVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 492
>gi|71896129|ref|NP_001026755.1| POU domain, class 3, transcription factor 1 [Gallus gallus]
gi|3172417|gb|AAC18592.1| POU class III transcription factor [Gallus gallus]
Length = 372
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 127/227 (55%), Gaps = 17/227 (7%)
Query: 167 LTPMSDPTPNPHQLHSSSMYGPSMNSMMT--GHHHHHHHS-----GALPASHHHGATHHP 219
L PMS P+ P L YG +N M+ G HH H GA A+ H A P
Sbjct: 124 LPPMSPPSGQP--LLYGQPYG-GLNGMLGPPGPALHHGHGLRDPLGAEEAAGHELAASPP 180
Query: 220 VMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
+ D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TI
Sbjct: 181 PPLGPPEPSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTI 237
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
CRFE+L LS NM LKP+L WLEE ++ + + + G K++KRTSI
Sbjct: 238 CRFEALQLSFKNMCKLKPLLNKWLEETDSSTGSPT---NLDKIAAQGRKRKKRTSIEVGV 294
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 295 KGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 341
>gi|56694822|gb|AAW23073.1| POU3 [Oikopleura dioica]
Length = 468
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 111/209 (53%), Gaps = 14/209 (6%)
Query: 184 SMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL------QHPDTDTDPREL 237
S Y M++ H + H++ S H L Q P TD +L
Sbjct: 244 SWYASQMSAAGVAAHPYSHYTNPYTGSALGAGLHDSFAAQNLFSLGDDQQPSTD----DL 299
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
E FA FKQ+RIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+
Sbjct: 300 ERFARDFKQKRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPL 356
Query: 298 LQAWLEEAE-AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
L WL+EA+ A D + G K++KRTSI K +LE F QP+PS +
Sbjct: 357 LSRWLDEADSATGGMPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAE 416
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I AE L L+K VVRVWFCN+RQK KR+
Sbjct: 417 ITNTAESLQLEKEVVRVWFCNRRQKAKRL 445
>gi|322367798|gb|ADW95821.1| POU domain protein [Sesamia nonagrioides]
Length = 141
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 103/147 (70%), Gaps = 8/147 (5%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA++FKQRRIKLG TQADVG AL L G SQ+TICRFE+L LS NM LKP+LQ
Sbjct: 1 FAKQFKQRRIKLGFTQADVGLALGTL--YG-NVFSQTTICRFEALQLSFKNMCKLKPLLQ 57
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 358
WLEEA++ + P + + A G K++KRTSI K +LE +F QP+PS ++I
Sbjct: 58 KWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEIT 113
Query: 359 AIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 114 SLADSLQLEKEVVRVWFCNRRQKEKRM 140
>gi|345308418|ref|XP_003428692.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Ornithorhynchus anatinus]
Length = 314
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 102/151 (67%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 144 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 200
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ P + + A G K++KRTSI K LE +F P+P+
Sbjct: 201 PLLNKWLEEADSSTGG----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAA 256
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 257 QEISSLADSLQLEKEVVRVWFCNRRQKEKRM 287
>gi|3355734|emb|CAA49383.1| transcription factor [Girardia tigrina]
Length = 507
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 102/151 (67%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA+ FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM L+
Sbjct: 267 DLEQFAKMFKQRRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLR 323
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSG 354
P+LQ WL EA++ +++ P + A +KRK RTSI A K LE+ F +PS
Sbjct: 324 PLLQKWLHEADSSSES----PTNFDKISAQSRKRKKRTSIEANVKSILESSFMKLSKPSA 379
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ I+++AEKL L+K VVRVWFCN+RQK+KR+
Sbjct: 380 QDISSLAEKLSLEKEVVRVWFCNRRQKEKRI 410
>gi|301611068|ref|XP_002935067.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Xenopus (Silurana) tropicalis]
Length = 419
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 111/182 (60%), Gaps = 12/182 (6%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
L H H H P++P D +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 152 LEMGHLHVPKHLPMVP------DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--K 203
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-- 324
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE+ + P +
Sbjct: 204 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESAPSDAALTPSTNYAQLSEM 262
Query: 325 -GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 383
G K++KRTSI + +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+K
Sbjct: 263 FGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLVMEKEVVRVWFCNRRQKEK 322
Query: 384 RM 385
R+
Sbjct: 323 RI 324
>gi|335295018|ref|XP_003130003.2| PREDICTED: POU domain, class 2, transcription factor 3 [Sus scrofa]
Length = 305
Score = 152 bits (383), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/184 (47%), Positives = 111/184 (60%), Gaps = 16/184 (8%)
Query: 211 HHHGATHHPVMP--PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLP 268
H + H PV P D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL
Sbjct: 32 HLEASQHLPVSKHLPSSGGADEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLY 89
Query: 269 GVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-- 324
G SQ+TI RFE+L LS NM LKP+L+ WL +AE+ DP PS P
Sbjct: 90 G-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS----DPSVSTPSSYPTLS 144
Query: 325 ---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
G K++KRTSI + +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK
Sbjct: 145 EVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQK 204
Query: 382 QKRM 385
+KR+
Sbjct: 205 EKRI 208
>gi|62821798|ref|NP_001015510.1| major octamer-binding protein [Strongylocentrotus purpuratus]
Length = 729
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/166 (48%), Positives = 106/166 (63%), Gaps = 17/166 (10%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
H + TD ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 441 HVEEQTDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNL 497
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVL-----PAG--EKKRKRTSIAAPEK 339
S NM LKP+LQ WL++A+ N P++L P G +++KRTSI +
Sbjct: 498 SFKNMCKLKPLLQKWLDDADTTVSN-------PALLGPHNSPEGINRRRKKRTSIETNIR 550
Query: 340 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
SLE F +QP+P+ E+I + E++ ++K VVRVWFCN+RQK+KR+
Sbjct: 551 ISLEKSFLMQPKPTSEEIVLLGEQMGMEKEVVRVWFCNRRQKEKRI 596
>gi|309319889|pdb|2XSD|C Chain C, Crystal Structure Of The Dimeric Oct-6 (Pou3f1) Pou Domain
Bound To Palindromic More Dna
Length = 164
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 107/167 (64%), Gaps = 7/167 (4%)
Query: 224 GLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
G +H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE
Sbjct: 1 GGEHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFE 57
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSL 342
+L LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +L
Sbjct: 58 ALQLSFKNMCKLKPLLNKWLEETDSSSGSP---TNLDKIAAQGRKRKKRTSIEVGVKGAL 114
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
E++F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 115 ESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 161
>gi|148698413|gb|EDL30360.1| POU domain, class 3, transcription factor 1 [Mus musculus]
Length = 270
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 62 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 118
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 119 QLSFKNMCKLKPLLNKWLEETDSSSGSP---TNLDKIAAQGRKRKKRTSIEVGVKGALES 175
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 176 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 220
>gi|144583210|gb|ABP01321.1| POU domain class 1 transcription factor 1 [Branchiostoma floridae]
Length = 356
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 102/166 (61%), Gaps = 10/166 (6%)
Query: 222 PPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRF 281
PP Q + RELE FA FK RRIKLG TQ +VG ALA++ G SQ+TICRF
Sbjct: 183 PPAAQAEPNTPELRELEEFANDFKLRRIKLGYTQTNVGSALASVH--GTD-FSQTTICRF 239
Query: 282 ESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKR 340
E+L LS+ N LKPILQ W+EEAE LP E+KRKR T+I K
Sbjct: 240 ENLQLSYKNACKLKPILQKWIEEAENSGG------PGGDKLPGNERKRKRRTTIGLSAKE 293
Query: 341 SLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+LE +F Q +PS + I +AE L L K VVRVWFCN+RQ++KR+K
Sbjct: 294 ALERHFLKQNKPSSQDIVRVAESLRLDKEVVRVWFCNRRQREKRVK 339
>gi|359319398|ref|XP_853080.3| PREDICTED: POU domain, class 2, transcription factor 3 [Canis lupus
familiaris]
Length = 396
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 105/164 (64%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 183 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 239
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE DP + PS P G K++KRTSI + +
Sbjct: 240 KNMCKLKPLLEKWLHDAETSPS----DPSMNTPSSFPTLNEVFGRKRKKRTSIETNIRLT 295
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>gi|260791526|ref|XP_002590780.1| hypothetical protein BRAFLDRAFT_218680 [Branchiostoma floridae]
gi|229275976|gb|EEN46791.1| hypothetical protein BRAFLDRAFT_218680 [Branchiostoma floridae]
Length = 159
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 100/153 (65%), Gaps = 6/153 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA FKQRRIKLG TQADVG AL + LSQ+TICRFE+L LS NM LK
Sbjct: 8 ELEQFAMVFKQRRIKLGFTQADVGLALGTIH---GNVLSQTTICRFEALQLSFKNMCKLK 64
Query: 296 PILQAWLEEAEAQAKNKRRDPD---APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 352
P+LQ WLE A++ D V+ G K++KRTSI K +LE +F QP+P
Sbjct: 65 PLLQKWLETADSNMSPGSLPKDEGLGGEVITPGRKRKKRTSIEVSVKGALETFFYKQPKP 124
Query: 353 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
S +I+ ++E L+L K VVRVWFCN+RQK++RM
Sbjct: 125 SAIEISQLSEGLNLDKEVVRVWFCNRRQKERRM 157
>gi|268054239|gb|ACY92606.1| nubbin-like transcription factor [Saccoglossus kowalevskii]
Length = 453
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 109/171 (63%), Gaps = 18/171 (10%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P Q + TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 149 PPSQSGEEPTDLEELEQFAKMFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 205
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA--------GEKKRKRTSI 334
+L LS NM LKP+LQ WLE+A++ N P+VL + G +++KRTSI
Sbjct: 206 ALNLSFKNMCKLKPLLQKWLEDADSSMTN-------PAVLGSPHTSPDGMGRRRKKRTSI 258
Query: 335 AAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+P+ E+IA +A++L ++K VVRVW+CN+RQK+KR+
Sbjct: 259 ETNVRAALEKSFMTNPKPTSEEIAMLADQLQMEKEVVRVWYCNRRQKEKRI 309
>gi|194207669|ref|XP_001916635.1| PREDICTED: POU domain, class 3, transcription factor 1-like [Equus
caballus]
Length = 295
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 6/154 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 98 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 154
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEE ++ + + + + G K++KRTSI K +LE++F P+PS
Sbjct: 155 PLLNKWLEETDSSSGSP---TNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAH 211
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 212 EITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 245
>gi|345319715|ref|XP_001514263.2| PREDICTED: POU domain, class 2, transcription factor 3-like,
partial [Ornithorhynchus anatinus]
Length = 314
Score = 151 bits (381), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 105/162 (64%), Gaps = 10/162 (6%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 62 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 118
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLE 343
NM LKP+L+ WL +AE+ + + P+ P+ G K++KRTSI + +LE
Sbjct: 119 KNMCKLKPLLEKWLSDAESSPSDSAVN--TPNAYPSLSEVFGRKRKKRTSIETNIRLTLE 176
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS E+I IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 177 KRFQENPKPSSEEITMIAEQLSMEKEVVRVWFCNRRQKEKRI 218
>gi|196005201|ref|XP_002112467.1| hypothetical protein TRIADDRAFT_16489 [Trichoplax adhaerens]
gi|190584508|gb|EDV24577.1| hypothetical protein TRIADDRAFT_16489, partial [Trichoplax
adhaerens]
Length = 151
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 80/151 (52%), Positives = 101/151 (66%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL +L G SQ+TICRFE+L LS NM LK
Sbjct: 8 DLEQFAKQFKQRRIKLGYTQADVGLALGSL--YG-NVFSQTTICRFEALQLSFKNMCKLK 64
Query: 296 PILQAWLEEAEAQAKNKRRDPDA-PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLE+A++ N P A V G K++KRTSI K +LE +F Q +PS
Sbjct: 65 PLLNKWLEQADSNNSN----PSAVDKVATQGRKRKKRTSIEVAVKGALENHFLKQSKPSA 120
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ I ++A L L K VVRVWFCN+RQK+KR+
Sbjct: 121 QDIGSLANTLQLDKEVVRVWFCNRRQKEKRL 151
>gi|332808557|ref|XP_524672.3| PREDICTED: POU domain, class 3, transcription factor 1 [Pan
troglodytes]
Length = 416
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 208 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 264
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 265 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 321
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 322 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 366
>gi|312101612|ref|XP_003149690.1| hypothetical protein LOAG_14143 [Loa loa]
gi|307755145|gb|EFO14379.1| hypothetical protein LOAG_14143 [Loa loa]
Length = 425
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/184 (45%), Positives = 110/184 (59%), Gaps = 6/184 (3%)
Query: 204 SGALPASHHHGATHH--PVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
S A P+S + P+ L T +LEAFA+ FKQRRIKLG TQADVG A
Sbjct: 223 SAAAPSSWPYAFAQDDLPLSSSQLADETDSTCSEDLEAFAKTFKQRRIKLGYTQADVGLA 282
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
L L SQ+TICRFE+L LS NM LKP+L WLEEA++ + + + +
Sbjct: 283 LGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSSPNSAFEKMTG 339
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
G K++KRTSI K LE +F P+P+ ++I +A +L L+K VVRVWFCN+RQK
Sbjct: 340 Q-GGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEITQVAMELQLEKEVVRVWFCNRRQK 398
Query: 382 QKRM 385
+KRM
Sbjct: 399 EKRM 402
>gi|85680226|gb|ABC72303.1| OctB [Oikopleura dioica]
Length = 219
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 88/191 (46%), Positives = 108/191 (56%), Gaps = 9/191 (4%)
Query: 197 HHHHHHHSGALPASHHHGATHHPVMPPGL-QHPDTDTDPRELEAFAERFKQRRIKLGVTQ 255
H+ + + AL A H + G Q P TD +LE FA FKQ+RIKLG TQ
Sbjct: 13 HYTNPYTGSALGAGLHDSFAAQNLFSLGDDQQPSTD----DLERFARDFKQKRIKLGYTQ 68
Query: 256 ADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAKNKRR 314
ADVG AL L SQ+TICRFE+L LS NM LKP+L WL+EA+ A
Sbjct: 69 ADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLSRWLDEADSATGGMPTI 125
Query: 315 DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVW 374
D + G K++KRTSI K +LE F QP+PS +I AE L L+K VVRVW
Sbjct: 126 GGDKLNQQVQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAEITNTAESLQLEKEVVRVW 185
Query: 375 FCNQRQKQKRM 385
FCN+RQK KR+
Sbjct: 186 FCNRRQKAKRL 196
>gi|301613928|ref|XP_002936445.1| PREDICTED: hypothetical protein LOC100497329 [Xenopus (Silurana)
tropicalis]
Length = 623
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 101/166 (60%), Gaps = 10/166 (6%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 248 HPEEPNDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNL 304
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAG-------EKKRKRTSIAAPEK 339
S NM LKP+LQ WL +AE + + P P G +++KRTSI +
Sbjct: 305 SFKNMCKLKPLLQKWLSDAETMSVDSTLPSPNPLSSPGGGYEGLPGRRRKKRTSIETNVR 364
Query: 340 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 365 YALEKSFIANQKPTSEEILVIAEQLKMEKEVIRVWFCNRRQKEKRI 410
>gi|260831460|ref|XP_002610677.1| hypothetical protein BRAFLDRAFT_117908 [Branchiostoma floridae]
gi|229296044|gb|EEN66687.1| hypothetical protein BRAFLDRAFT_117908 [Branchiostoma floridae]
Length = 755
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 102/156 (65%), Gaps = 12/156 (7%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM L
Sbjct: 379 EELEQFAKMFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKL 435
Query: 295 KPILQAWLEEAEAQAKNKRRDPDA-----PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQ 349
KP+L+ WL++A++ N P A S+ G +++KRTSI + +LE F
Sbjct: 436 KPLLEKWLQDADSSMAN----PGALGSPHGSIEVLGRRRKKRTSIETNVRVALEKAFIQN 491
Query: 350 PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+P+ E+I IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 492 PKPTSEEIGIIAEQLGMEKEVVRVWFCNRRQKEKRI 527
>gi|363742533|ref|XP_425799.3| PREDICTED: POU domain, class 2, transcription factor 3 [Gallus
gallus]
Length = 489
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 10/159 (6%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 240 SDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNM 296
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYF 346
LKP+L+ WL +AE+ + PS P+ G K++KRTSI + +LE F
Sbjct: 297 CKLKPLLEKWLSDAESAPLDSSMS--TPSSYPSVNEMFGRKRKKRTSIETNIRSTLEKRF 354
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 355 QDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRI 393
>gi|194212782|ref|XP_001501310.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Equus
caballus]
Length = 686
Score = 150 bits (380), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 103/164 (62%), Gaps = 14/164 (8%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L LS
Sbjct: 433 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSF 489
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE+ DP PS P G K++KRTSI + +
Sbjct: 490 KNMCKLKPLLEKWLNDAESSPS----DPSMSTPSSYPTLSEVFGRKRKKRTSIETNIRLT 545
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 546 LEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 589
>gi|397489036|ref|XP_003815543.1| PREDICTED: uncharacterized protein LOC100972472 [Pan paniscus]
Length = 614
Score = 150 bits (379), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 78/154 (50%), Positives = 102/154 (66%), Gaps = 6/154 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 405 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 461
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEE ++ + + + + G K++KRTSI K +LE++F P+PS
Sbjct: 462 PLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAH 518
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 519 EITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 552
>gi|156230918|gb|AAI52215.1| Unknown (protein for IMAGE:8122494) [Danio rerio]
gi|170285095|gb|AAI60970.1| LOC100145403 protein [Xenopus (Silurana) tropicalis]
Length = 337
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 119/221 (53%), Gaps = 10/221 (4%)
Query: 167 LTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQ 226
L+P+S P N HQ S G +M S HH A H P P
Sbjct: 123 LSPLS-PASNGHQSLVYSQTGYTMLSPQPSLHHGLRDPLHDDAGSHDNQMESPQQPFSHH 181
Query: 227 HPDTDTDP---RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFES 283
+D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+
Sbjct: 182 QDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEA 238
Query: 284 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
L LS NM LKP+L WLEE ++ N + + G K++KRTSI K +LE
Sbjct: 239 LQLSFKNMCKLKPLLNKWLEETDS---NTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALE 295
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
+F P+PS +I +A L L+K VVRVWFCN+RQK+K+
Sbjct: 296 NHFLKCPKPSAHEITTLAGTLQLEKEVVRVWFCNRRQKKKK 336
>gi|341901132|gb|EGT57067.1| CBN-CEH-6 protein [Caenorhabditis brenneri]
Length = 381
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 108/169 (63%), Gaps = 11/169 (6%)
Query: 224 GLQHPDTD-------TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
G Q P +D T P +LE FA++FKQRRIKLG TQADVG AL L SQ+
Sbjct: 172 GNQQPLSDISDDSEQTCPDDLEGFAKQFKQRRIKLGYTQADVGVALGTLY---GNIFSQT 228
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFE+L LS NM LKP+L WLEEA++ + + + AG K++KRTSI
Sbjct: 229 TICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGSPNSTFEKMTGQ-AGRKRKKRTSIEV 287
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K LE +F +P+ ++IA++A +L L+K VVRVWFCN+RQK+KR+
Sbjct: 288 NVKSRLEFHFQSNQKPNAQEIASVAMELQLEKEVVRVWFCNRRQKEKRI 336
>gi|449489457|ref|XP_002190945.2| PREDICTED: POU domain, class 2, transcription factor 3-like
[Taeniopygia guttata]
Length = 439
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 190 SDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNM 246
Query: 292 IALKPILQAWLEEAE-AQAKNKRRDPDA-PSVLPA-GEKKRKRTSIAAPEKRSLEAYFAV 348
LKP+L+ WL +AE A + P++ PSV G K++KRTSI + +LE F
Sbjct: 247 CKLKPLLEKWLSDAESAPLDSSMSTPNSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQD 306
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 307 NPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRI 343
>gi|341876824|gb|EGT32759.1| hypothetical protein CAEBREN_17987 [Caenorhabditis brenneri]
Length = 381
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 108/169 (63%), Gaps = 11/169 (6%)
Query: 224 GLQHPDTD-------TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
G Q P +D T P +LE FA++FKQRRIKLG TQADVG AL L SQ+
Sbjct: 172 GNQQPLSDISDDSEQTCPDDLEGFAKQFKQRRIKLGYTQADVGVALGTLY---GNIFSQT 228
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFE+L LS NM LKP+L WLEEA++ + + + AG K++KRTSI
Sbjct: 229 TICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGSPNSTFEKMTGQ-AGRKRKKRTSIEV 287
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K LE +F +P+ ++IA++A +L L+K VVRVWFCN+RQK+KR+
Sbjct: 288 NVKSRLEFHFQSNQKPNAQEIASVAMELQLEKEVVRVWFCNRRQKEKRI 336
>gi|449267410|gb|EMC78355.1| POU domain, class 2, transcription factor 3, partial [Columba
livia]
Length = 428
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 179 SDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNM 235
Query: 292 IALKPILQAWLEEAE-AQAKNKRRDPDA-PSVLPA-GEKKRKRTSIAAPEKRSLEAYFAV 348
LKP+L+ WL +AE A + P++ PSV G K++KRTSI + +LE F
Sbjct: 236 CKLKPLLEKWLSDAESAPLDSSMSTPNSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQD 295
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 296 NPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>gi|326933281|ref|XP_003212735.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Meleagris gallopavo]
Length = 539
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/159 (50%), Positives = 104/159 (65%), Gaps = 10/159 (6%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 290 SDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNM 346
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYF 346
LKP+L+ WL +AE+ + PS P+ G K++KRTSI + +LE F
Sbjct: 347 CKLKPLLEKWLSDAESAPLDSSMS--TPSSYPSVNEMFGRKRKKRTSIETNIRSTLEKRF 404
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 405 QDNPKPSSEEISLIAEQLSMEKEVVRVWFCNRRQKEKRI 443
>gi|281349718|gb|EFB25302.1| hypothetical protein PANDA_013172 [Ailuropoda melanoleuca]
Length = 157
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 103/160 (64%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 1 HSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 57
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE++
Sbjct: 58 LSFKNMCKLKPLLNKWLEETDSSSGS---PTNLDKIAAQGRKRKKRTSIEVGVKGALESH 114
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 115 FLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRM 154
>gi|91086791|ref|XP_973307.1| PREDICTED: similar to ADAMTS-like protein 4 precursor (ADAMTSL-4)
(Thrombospondin repeat-containing protein 1) [Tribolium
castaneum]
Length = 844
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/80 (88%), Positives = 75/80 (93%)
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPR 351
+ ++ +AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPR
Sbjct: 180 VCIEGSCKAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPR 239
Query: 352 PSGEKIAAIAEKLDLKKNVV 371
PSGEKIAAIAEKLDLKKN V
Sbjct: 240 PSGEKIAAIAEKLDLKKNSV 259
>gi|268567672|ref|XP_002640055.1| C. briggsae CBR-CEH-6 protein [Caenorhabditis briggsae]
Length = 374
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 107/172 (62%), Gaps = 6/172 (3%)
Query: 214 GATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL 273
GA P+ + T P +LE FA++FKQRRIKLG TQADVG AL L
Sbjct: 171 GANQQPLS--DISDDSEQTCPDDLEGFAKQFKQRRIKLGYTQADVGVALGTLY---GNIF 225
Query: 274 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTS 333
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + + AG K++KRTS
Sbjct: 226 SQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGSPNSTFEKMTGQ-AGRKRKKRTS 284
Query: 334 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I K LE +F +P+ ++IA +A +L L+K VVRVWFCN+RQK+KR+
Sbjct: 285 IEVNVKSRLEFHFQANQKPNAQEIAQVAMELQLEKEVVRVWFCNRRQKEKRI 336
>gi|308220118|gb|ADO22631.1| POU class homeobox transcription factor Pou1 [Mnemiopsis leidyi]
Length = 339
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 122/216 (56%), Gaps = 38/216 (17%)
Query: 198 HHHHHHSGA---LPASHHHGATH-------------HPVMPPG--------LQHPDTDTD 233
H HH GA +P+ HG+ H HPV PP L P+ +
Sbjct: 96 QHIQHHQGAPHHVPS--FHGSQHLSRVQEQHLHHNPHPVSPPRMSEDKPLMLTSPEAVGN 153
Query: 234 PREL---EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
P EL E FA FK RRIKLG TQ +VG ALA++ G SQ+TICRFE+L LS N
Sbjct: 154 PPELKTLEDFANEFKIRRIKLGYTQTNVGGALASVH--GTD-FSQTTICRFENLQLSFKN 210
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
L PIL+ WLEE E K+ + + P+ K+++RT+I K +LE +F Q
Sbjct: 211 ACKLMPILRKWLEETEKSGKHGQE------ISPSERKRKRRTTIGVSAKDNLEQHFERQS 264
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+PS ++I AIA+ L L+K VVRVWFCN+RQ++KR+K
Sbjct: 265 KPSSQEIQAIAKSLGLEKEVVRVWFCNRRQREKRVK 300
>gi|260808508|ref|XP_002599049.1| hypothetical protein BRAFLDRAFT_224999 [Branchiostoma floridae]
gi|229284325|gb|EEN55061.1| hypothetical protein BRAFLDRAFT_224999 [Branchiostoma floridae]
Length = 188
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/166 (50%), Positives = 103/166 (62%), Gaps = 10/166 (6%)
Query: 222 PPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRF 281
PP Q + RELE FA FK RRIKLG TQ +VG ALA++ G SQ+TICRF
Sbjct: 15 PPAAQAEPNTPELRELEEFANDFKLRRIKLGYTQTNVGSALASVH--GTD-FSQTTICRF 71
Query: 282 ESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKR 340
E+L LS+ N LKPILQ W+EEAE P LP E+KRKR T+I K
Sbjct: 72 ENLQLSYKNACKLKPILQKWIEEAENSG-----GPGGDK-LPGNERKRKRRTTIGLSAKE 125
Query: 341 SLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+LE +F Q +PS + I +AE L L K VVRVWFCN+RQ++KR+K
Sbjct: 126 ALERHFLKQNKPSSQDIVRVAESLRLDKEVVRVWFCNRRQREKRVK 171
>gi|327276180|ref|XP_003222848.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Anolis
carolinensis]
Length = 436
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 107/170 (62%), Gaps = 11/170 (6%)
Query: 221 MPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
+PP + + D P ELE FA+ FKQRRI LG Q DVG A+ KL G SQ+TI R
Sbjct: 177 LPPSMAN-DEANPPEELEKFAKTFKQRRINLGFPQGDVGLAMG--KLYG-NDFSQTTISR 232
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-----GEKKRKRTSIA 335
FE+L LS NM LKP+L+ WL +AE + +P+ PA G K++KRTSI
Sbjct: 233 FEALNLSFKNMCKLKPLLEKWLSDAENSPLDS--SVSSPANYPAVNEMFGRKRKKRTSIE 290
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 291 TNIRSTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 340
>gi|17506277|ref|NP_492304.1| Protein CEH-6 [Caenorhabditis elegans]
gi|21264443|sp|P20268.3|HM06_CAEEL RecName: Full=Homeobox protein ceh-6
gi|9966509|gb|AAG10298.1|AF286377_1 POU family III homeodomain protein CEH-6 [Caenorhabditis elegans]
gi|14530517|emb|CAB00031.2| Protein CEH-6 [Caenorhabditis elegans]
Length = 380
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
T P +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM
Sbjct: 190 TCPDDLEGFAKQFKQRRIKLGYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNM 246
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPR 351
LKP+L WLEEA++ + + + AG K++KRTSI K LE +F +
Sbjct: 247 CKLKPLLFKWLEEADSTTGSPNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQSNQK 305
Query: 352 PSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+ ++I +A +L L+K VVRVWFCN+RQK+KR+
Sbjct: 306 PNAQEITQVAMELQLEKEVVRVWFCNRRQKEKRI 339
>gi|149023899|gb|EDL80396.1| rCG30866 [Rattus norvegicus]
Length = 457
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 106/171 (61%), Gaps = 13/171 (7%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE------ 338
LS NM LKP+L WLEE ++ + + + + G K++KRTSI
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVXXXXXXXV 356
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
K +LE++F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 KGALESHFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 407
>gi|443719204|gb|ELU09478.1| hypothetical protein CAPTEDRAFT_156286 [Capitella teleta]
Length = 353
Score = 148 bits (374), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 115/175 (65%), Gaps = 11/175 (6%)
Query: 214 GATH-HPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
G TH +M P P+ + D ELE FA++FK+RRI+LG TQ DVG A+ KL G
Sbjct: 80 GGTHVSRIMTP----PEENCDLEELEMFAKQFKRRRIELGFTQGDVGLAMG--KLYG-ND 132
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQAKNKRRDPDAPSVLPAGEKKRK 330
SQ+TI RFE+L LS NM LKP+LQ WLE+A+ + + N P +P L +++K
Sbjct: 133 FSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADTVSASSNLPGMPLSPDSL-GSRRRKK 191
Query: 331 RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RTSI + + +LE F V +PS E I+ +A++L++++ V+RVWFCN+RQK+KR+
Sbjct: 192 RTSIDSTIRVALEKSFLVNSKPSSEDISMLADRLNMEREVIRVWFCNRRQKEKRI 246
>gi|444725260|gb|ELW65833.1| POU domain, class 2, transcription factor 3, partial [Tupaia
chinensis]
Length = 340
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 103/162 (63%), Gaps = 10/162 (6%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 129 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 185
Query: 289 NNMIALKPILQAWLEEAEAQ-----AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
NM LKP+L+ WL +AE+ A P V G K++KRTSI + +LE
Sbjct: 186 KNMCKLKPLLEKWLNDAESSPSDPSASTANSYPTLSEVF--GRKRKKRTSIETNIRLTLE 243
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 244 KRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 285
>gi|308499925|ref|XP_003112148.1| CRE-CEH-6 protein [Caenorhabditis remanei]
gi|308268629|gb|EFP12582.1| CRE-CEH-6 protein [Caenorhabditis remanei]
Length = 375
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
T P +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM
Sbjct: 181 TCPDDLEGFAKQFKQRRIKLGYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNM 237
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPR 351
LKP+L WLEEA++ + + + AG K++KRTSI K LE +F +
Sbjct: 238 CKLKPLLFKWLEEADSTTGSPNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQANQK 296
Query: 352 PSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+ ++I +A +L L+K VVRVWFCN+RQK+KR+
Sbjct: 297 PNAQEIGQVAMELQLEKEVVRVWFCNRRQKEKRI 330
>gi|432901517|ref|XP_004076874.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Oryzias latipes]
Length = 378
Score = 148 bits (373), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 105/163 (64%), Gaps = 5/163 (3%)
Query: 225 LQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+Q D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L
Sbjct: 137 VQTQDEPSDLEELEQFAKAFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEAL 193
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSL 342
LS NM LKP+L+ WL +AE + + P + G K++KRTSI K +L
Sbjct: 194 NLSFKNMCKLKPLLEKWLSDAENSPSDSMTSSSSLPPLMEGYGRKRKKRTSIETNIKMTL 253
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E F P+P+ E+I+ I+E+L ++K VVRVWFCN+RQK+KR+
Sbjct: 254 EKRFHDNPKPNSEEISLISEQLSMEKEVVRVWFCNRRQKEKRI 296
>gi|47523414|ref|NP_999328.1| pituitary-specific positive transcription factor 1 [Sus scrofa]
gi|6638252|gb|AAB65789.2| POU-domain transcriptional regulator [Sus scrofa]
gi|300518903|gb|ADK25701.1| POU class 1 homeobox 1 [Sus scrofa]
Length = 291
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 141/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + ++ M+T T + P+ H + SS YG S+ + H+
Sbjct: 27 MHHSAAECLPASNHATNVMSTATGLHYSVPSCHYGNQSSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++P ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPMHQPLLPEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|314122349|ref|NP_001186612.1| POU transcription factor isoform 1 [Danio rerio]
gi|120538152|gb|AAI29275.1| Zgc:136377 [Danio rerio]
Length = 398
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 5/159 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 160 DEPNDLEELEQFAKAFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 216
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
NM LKP+L+ WL +AE + + P + G K++KRTSI K +LE F
Sbjct: 217 KNMCKLKPLLEKWLSDAENSPSDTMTNTTTLPPLMEGYGRKRKKRTSIETNIKLTLEKRF 276
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+P+ E+I I+E+L ++K VVRVWFCN+RQK+KR+
Sbjct: 277 LDNPKPNSEEITLISEQLAMEKEVVRVWFCNRRQKEKRI 315
>gi|344293200|ref|XP_003418312.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Loxodonta africana]
Length = 576
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 103/162 (63%), Gaps = 10/162 (6%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 323 DEPSDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 379
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRD-----PDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
NM LKP+L+ WL +AE+ + P V G K++KRTSI + +LE
Sbjct: 380 KNMCKLKPLLEKWLNDAESSPSDSSVSTPSSYPTLSEVF--GRKRKKRTSIETNIRLTLE 437
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 438 KRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 479
>gi|94573484|gb|AAI16524.1| Zgc:136377 [Danio rerio]
gi|182890844|gb|AAI65558.1| Zgc:136377 protein [Danio rerio]
Length = 397
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 102/159 (64%), Gaps = 5/159 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 159 DEPNDLEELEQFAKAFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 215
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
NM LKP+L+ WL +AE + + + P + G +++KRTSI K +LE F
Sbjct: 216 KNMCKLKPLLEKWLSDAENSPSDTKTNTTTLPPLMEGYGRQRKKRTSIETNIKLTLEKRF 275
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+P+ E+I I+E+L ++K VVRVWFCN+RQK+KR+
Sbjct: 276 LDNPKPNSEEITLISEQLAMEKEVVRVWFCNRRQKEKRI 314
>gi|314122200|ref|NP_001038720.2| POU transcription factor isoform 2 [Danio rerio]
Length = 397
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 5/159 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS
Sbjct: 159 DEPNDLEELEQFAKAFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSF 215
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
NM LKP+L+ WL +AE + + P + G K++KRTSI K +LE F
Sbjct: 216 KNMCKLKPLLEKWLSDAENSPSDTMTNTTTLPPLMEGYGRKRKKRTSIETNIKLTLEKRF 275
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+P+ E+I I+E+L ++K VVRVWFCN+RQK+KR+
Sbjct: 276 LDNPKPNSEEITLISEQLAMEKEVVRVWFCNRRQKEKRI 314
>gi|395851441|ref|XP_003798264.1| PREDICTED: POU domain, class 3, transcription factor 2 [Otolemur
garnettii]
Length = 438
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 107/163 (65%), Gaps = 13/163 (7%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 254 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 310
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR---TSIAAPEKRSL 342
LS NM LKP+L WLEEA++ + + P + + A +KRK+ ++ K +L
Sbjct: 311 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSV--KGAL 364
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E++F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 365 ESHFLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 407
>gi|167859585|gb|ACA04747.1| PouI [Amphimedon queenslandica]
Length = 324
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 162/324 (50%), Gaps = 40/324 (12%)
Query: 66 QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS 125
Q S G +G L S + +M+ +P S P P+ + +
Sbjct: 28 QASEQGREG-SPLRSPTVAMSMKSPRSQPASGPNDQQHKDLTA--------------QVA 72
Query: 126 GALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSD--PTPNPHQLHSS 183
AL S + A PS + ++ H + + I ++TT M++ PT P +H
Sbjct: 73 AALQYSQYAAANPSQIPVHVIAAH-QNLQQAAGRIPVAVTTSFQMANGSPTLTPTLVH-- 129
Query: 184 SMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAER 243
P++ S+ + SG + A GA H +P Q + + LEAFA
Sbjct: 130 ----PNLTSLSSPQSFQP--SGVIQAP---GAAHPKNIPITAQVDPESPEVKNLEAFAVS 180
Query: 244 FKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLE 303
FK RR+KLG TQ +VG+ALA++ G SQ+TICRFE+L LS+ N LKPIL+ WLE
Sbjct: 181 FKSRRVKLGYTQTNVGQALASVH--GTN-FSQTTICRFENLQLSYKNAQKLKPILEKWLE 237
Query: 304 EAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 362
EAE Q + + E+ RKR T+I K LE +F VQP+PS I +A+
Sbjct: 238 EAEKQGAIQHEEESM-------ERHRKRRTTIGMSAKERLEQHFQVQPKPSSSDITKVAD 290
Query: 363 KLDLKKNVVRVWFCNQRQKQKRMK 386
L+L K V+RVWFCN+RQ++KR++
Sbjct: 291 SLNLDKEVIRVWFCNRRQREKRVR 314
>gi|348527940|ref|XP_003451477.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Oreochromis niloticus]
Length = 393
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 84/185 (45%), Positives = 115/185 (62%), Gaps = 9/185 (4%)
Query: 206 ALPASHHHGATHHPVMPPGLQHPDTDTDPRELE---AFAERFKQRRIKLGVTQADVGKAL 262
A P+ +H H MP + P + +P ELE FA+ FKQRRIKLG TQ DVG A+
Sbjct: 129 AGPSMENHMDMSHLQMPKHMSVPPQE-EPNELEDLEQFAKAFKQRRIKLGFTQGDVGLAM 187
Query: 263 ANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA-PSV 321
KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + + P++
Sbjct: 188 G--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSDTMSNSSSLPTL 244
Query: 322 LPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
+ G K++KRTSI K +LE F P+P+ E+I I+E+L ++K VVRVWFCN+RQ
Sbjct: 245 MEGYGRKRKKRTSIETNIKMTLEKRFLDNPKPNSEEITLISEQLSMEKEVVRVWFCNRRQ 304
Query: 381 KQKRM 385
K+KR+
Sbjct: 305 KEKRI 309
>gi|395731477|ref|XP_002811766.2| PREDICTED: uncharacterized protein LOC100448372, partial [Pongo
abelii]
Length = 565
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 105/162 (64%), Gaps = 9/162 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 389 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 445
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 446 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 501
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F P+PS ++I +A+ L L+K VVRVWFCN+ Q +K MK
Sbjct: 502 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRLQNEKLMK 543
>gi|449273145|gb|EMC82753.1| Transcription factor POU1, partial [Columba livia]
Length = 146
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 99/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 1 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 57
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEE ++ + + + G K++KRTSI K +LE +F P+PS
Sbjct: 58 PLLNKWLEETDSSTGS---PTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAH 114
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 115 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 144
>gi|432110436|gb|ELK34053.1| POU domain, class 2, transcription factor 3 [Myotis davidii]
Length = 301
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 108/172 (62%), Gaps = 16/172 (9%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQA--DVGKALANLKLPGVGALSQSTICR 280
PG D +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI R
Sbjct: 100 PGSGGADEPSDLEELEKFAKTFKQRRIKLGFTQVRGDVGLAMG--KLYG-NDFSQTTISR 156
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTS 333
FE+L LS NM LKP+L+ WL +AEA DP PS PA G K++KRTS
Sbjct: 157 FEALNLSFKNMCKLKPLLEKWLSDAEASPA----DPSVSTPSAGPAFTEVFGRKRKKRTS 212
Query: 334 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I + +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 213 IETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 264
>gi|328697316|ref|XP_001944692.2| PREDICTED: hypothetical protein LOC100164863 [Acyrthosiphon pisum]
Length = 624
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 101/155 (65%), Gaps = 12/155 (7%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LK
Sbjct: 413 ELEQFAKLFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLK 469
Query: 296 PILQAWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQP 350
P+LQ WL +A++ N P A P P G +++KRTSI + SLE F P
Sbjct: 470 PLLQKWLVDADSTMTN----PSALCNPLTTPEAIGRRRKKRTSIETSIRYSLEKAFRANP 525
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I+ +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 526 KPTSEEISILADNLSMEKEVVRVWFCNRRQKEKRI 560
>gi|301625653|ref|XP_002942017.1| PREDICTED: POU domain, class 5, transcription factor 1.2-like
[Xenopus (Silurana) tropicalis]
Length = 445
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 101/153 (66%), Gaps = 6/153 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIAL 294
E+E FA+ K +RI +G TQADVG AL L G SQ+TICRFESL LS NM L
Sbjct: 229 EMEQFAKDLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKL 284
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+L++WL E E +N + ++P +K++ RTSI KR+LE YF P+PS
Sbjct: 285 KPLLRSWLHEVENN-ENLQEIISRGQIIPQVQKRKHRTSIENNVKRTLETYFMQCPKPSA 343
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
++IA IA +L+++K+VVRVWFCN+RQK KR +
Sbjct: 344 QEIAQIARELNMEKDVVRVWFCNRRQKGKRQVY 376
>gi|405952348|gb|EKC20170.1| POU domain, class 2, transcription factor 1 [Crassostrea gigas]
Length = 507
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 160/337 (47%), Gaps = 68/337 (20%)
Query: 78 LDSISSSMTTLT------PMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPAS 131
+ S+SSS T T P+S TP P Q+ +S + ++ + +GAL +
Sbjct: 91 VTSLSSSANTTTVVTQQAPISSATPQPTQIQTSPLATTTLQGL----------AGALQGT 140
Query: 132 HHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMT-------TLTPMSDPTPNPHQLHSSS 184
V L P G+ L + + I + + T+TP+ +SS
Sbjct: 141 QQIV-----FLNPTQLTTGLQPLLIQNQIQVAASQPNQIPQTVTPIKVQNTMTKISNSSQ 195
Query: 185 MY---GPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFA 241
+ P+ N + SG + +PP + + D ELE FA
Sbjct: 196 IVLPNAPTTNVAVKSSPEELSSSGIVDE-----------IPP-----EENIDLEELEQFA 239
Query: 242 ERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAW 301
+ FK+RRI+LG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ W
Sbjct: 240 KTFKRRRIELGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKW 296
Query: 302 LEEAEAQAKN-------------KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
L++A+ N P++ +++KRTSI + +LE F
Sbjct: 297 LKDADTMCANLNTPVGGSPGGNGNSLSPES-----VARRRKKRTSIETNIRVALEKSFQQ 351
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+PS E+I ++A++L ++K VVRVWFCN+RQKQKR+
Sbjct: 352 NPKPSSEEITSVADQLSMEKEVVRVWFCNRRQKQKRI 388
>gi|284026532|gb|ADB66166.1| Pit-1-like protein, partial [Aurelia sp. 1 NN-2010a]
Length = 205
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 106/183 (57%), Gaps = 20/183 (10%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
L +H A P H + +ELE FA FK RRIKLG TQ +VG ALA K
Sbjct: 27 LQNTHLESAQKDPT------HLVVSKELQELERFATGFKMRRIKLGYTQTNVGAALA--K 78
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ--AKNKRRDPDAPSVLPA 324
L SQ+TICRFE+L LS+ N LKP+L+AWLE+AEA N +
Sbjct: 79 LSDGTDFSQTTICRFENLQLSYKNACKLKPLLEAWLEKAEAMGVVNNDK---------SV 129
Query: 325 GEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 383
E+KRKR T+I K LE YF QP+PS ++ IAE L L K VVRVWFCN+RQ++K
Sbjct: 130 SERKRKRRTTIGLHAKEMLERYFQRQPKPSSLEVFGIAEGLKLDKEVVRVWFCNRRQREK 189
Query: 384 RMK 386
R+K
Sbjct: 190 RIK 192
>gi|2052272|emb|CAA73079.1| pit-1 [Sus scrofa]
Length = 285
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + ++ M+T T + P+ H + SS YG S+ + H+
Sbjct: 21 MHHSAAECLPASNHATNVMSTATGLHYSVPSCHYGNQSSTYGVMAGSLTPCLYKFRDHT- 79
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++P ++ P D D+ + RELE FA FK R
Sbjct: 80 ---LSHGFPPMHQPLLPEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 136
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 137 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 193
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 194 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEEL 245
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+ Q++KR+K
Sbjct: 246 NLEKEVVRVWFCNRMQREKRVK 267
>gi|334321742|ref|XP_003340155.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Monodelphis domestica]
Length = 728
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 107/169 (63%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 260 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 313
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPDA-----PSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + P+A P + +++KRTSI
Sbjct: 314 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPNALNSPGPGIEGLNRRRKKRTSIET 373
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 374 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 422
>gi|326933007|ref|XP_003212601.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Meleagris gallopavo]
Length = 248
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/149 (50%), Positives = 98/149 (65%), Gaps = 6/149 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 29 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 85
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEE ++ + + + G K++KRTSI K +LE +F P+PS
Sbjct: 86 PLLNKWLEETDSSTGS---PTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAH 142
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
+I ++A+ L L+K VVRVWFCN+RQK+KR
Sbjct: 143 EITSLADSLQLEKEVVRVWFCNRRQKEKR 171
>gi|334346736|ref|XP_003341843.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Monodelphis domestica]
Length = 312
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/296 (37%), Positives = 146/296 (49%), Gaps = 54/296 (18%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLF---PQMSHHGMDGLEMLDSISSSMTTLTPMSDP 173
HH + LPAS+H PS+L P+ SH + SMTT S
Sbjct: 28 HHSAADCLPASNHATNVVSTVPSILSLIQTPKFSH-----------MHFSMTTFGNASAS 76
Query: 174 ----TPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVM---PPGLQ 226
P+ H + S YG S+ + H+ SH H P++ P +
Sbjct: 77 LHYSVPSCHYGNQQSTYGVMTGSLTPCLYKFPDHA----LSHGFPPMHQPLLGDDPTAID 132
Query: 227 HPD------------TDTDP---RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG 271
TD D +ELE FA FK RRIKLG TQ +VG+ALA +
Sbjct: 133 FKQEFRRKNKSVEEPTDMDSPEIQELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GS 189
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS N LK IL WL+EAE Q D + A E+KRKR
Sbjct: 190 EFSQTTICRFENLQLSFKNACKLKSILSKWLDEAE-QVGALYNDK-----VGANERKRKR 243
Query: 332 -TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
T+I+ K +LE YF Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 244 RTTISIAAKEALERYFGGQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 299
>gi|327289479|ref|XP_003229452.1| PREDICTED: POU domain, class 2, transcription factor 2-like [Anolis
carolinensis]
Length = 633
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 104/166 (62%), Gaps = 10/166 (6%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 232 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNL 288
Query: 287 SHNNMIALKPILQAWLEEAEAQA-------KNKRRDPDAPSVLPAGEKKRKRTSIAAPEK 339
S NM LKP+L+ WL +AE + N+ P+ G +++KRTSI +
Sbjct: 289 SFKNMCKLKPLLEKWLNDAETMSVDSTLPSPNQLTSPNMGFDGLPGRRRKKRTSIETNVR 348
Query: 340 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+LE F +P+ E+I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 349 FALEKSFLANQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEKRI 394
>gi|395854060|ref|XP_003799516.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Otolemur garnettii]
Length = 587
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|432908830|ref|XP_004078055.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Oryzias latipes]
Length = 610
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 111/194 (57%), Gaps = 11/194 (5%)
Query: 200 HHHHSGALPASHHHGATHHPVMPPGL-QHPDTDTDPRELEAFAERFKQRRIKLGVTQADV 258
+ L A G M P + HP+ +D ELE FA FKQRRIKLG TQ DV
Sbjct: 159 QQNQGSLLSAPTRMGLQPQVCMAPSVTSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDV 218
Query: 259 GKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA 318
G A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + +
Sbjct: 219 GLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSIDSTLPSPS 275
Query: 319 PSVLPA-------GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
P+ G +++KRTSI + +LE F +P+ E+I IAE+L+++K V+
Sbjct: 276 SLSSPSLGFEGVPGRRRKKRTSIETNVRVALERSFLTNQKPTSEEILLIAEQLNMEKEVI 335
Query: 372 RVWFCNQRQKQKRM 385
RVWFCN+RQK+KR+
Sbjct: 336 RVWFCNRRQKEKRI 349
>gi|410905841|ref|XP_003966400.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Takifugu rubripes]
Length = 613
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 197 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNL 253
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + + +P G +++KRTSI
Sbjct: 254 SFKNMCKLKPLLEKWLNDAETMSIDSTLPSPSSLSSPTLGFDGIP-GRRRKKRTSIETNV 312
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 313 RVALERAFMTNQKPTSEEIMLIAEQLNMEKEVIRVWFCNRRQKEKRI 359
>gi|224072937|ref|XP_002190361.1| PREDICTED: POU domain, class 5, transcription factor 1.1-like
[Taeniopygia guttata]
Length = 293
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 100/151 (66%), Gaps = 6/151 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIAL 294
ELE FA+ K +RI LG TQADVG AL L G + SQ+TICRFE+L LS NM L
Sbjct: 81 ELEQFAKDLKHKRIMLGFTQADVGLALGTL----YGKMFSQTTICRFEALQLSFKNMCKL 136
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+LQ WL EAE N + +A VL K+++RTSI K +LE++F +PS
Sbjct: 137 KPLLQRWLNEAE-NTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSP 195
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I+ IAE L+L K+VVRVWFCN+RQK KR+
Sbjct: 196 QEISQIAEDLNLDKDVVRVWFCNRRQKGKRL 226
>gi|397481160|ref|XP_003811823.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 2
[Pan paniscus]
Length = 585
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|326913147|ref|XP_003202902.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Meleagris gallopavo]
Length = 335
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 149/302 (49%), Gaps = 49/302 (16%)
Query: 121 HHHHSGALPASHH---------HVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMT 165
HH + LP S+H H + PS Q S +G M G+ EML + S
Sbjct: 28 HHSAAECLPVSNHATSVVSTGLHYSVPSCHYGNQTSTYGVMTGIKPATPEMLSASLSQSR 87
Query: 166 TLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP--- 222
L S P PN ++ S S+ + H + + H H ++
Sbjct: 88 ILQTCSMPHPNV--VNGVSTLQSSLTPCLYKFPEHALSASSCALGHSFTPMHQTLLSDDP 145
Query: 223 -------------PGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA +
Sbjct: 146 TAADFKQEFRRKSKSVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH- 204
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAG 325
SQ+TICRFE+L LS N LK IL WLEEAE N++ +
Sbjct: 205 --GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVN 254
Query: 326 EKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR
Sbjct: 255 ERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKR 314
Query: 385 MK 386
+K
Sbjct: 315 VK 316
>gi|53490|emb|CAA41008.1| Oct2.5 transcription factor [Mus musculus]
Length = 583
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|254588024|ref|NP_001157026.1| POU domain, class 2, transcription factor 2 isoform 4 [Mus
musculus]
gi|288174|emb|CAA37702.1| Oct2b [Mus musculus]
Length = 583
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|344277181|ref|XP_003410382.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Loxodonta africana]
Length = 291
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 143/266 (53%), Gaps = 37/266 (13%)
Query: 143 FPQMSHH-GMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHH 201
P M HH + L + + ++ M+T T + P+ H + +S YG S+ +
Sbjct: 23 LPLMMHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQASTYGVMAGSLTPCLYKFP 82
Query: 202 HHSGALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAER 243
H+ SH H P++ ++ P D D+ + RELE FA
Sbjct: 83 DHT----LSHGFPPMHQPLLAEDPTAADFKQELRRKSKLVEEPVDMDSPEIRELEKFANE 138
Query: 244 FKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLE 303
FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLE
Sbjct: 139 FKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLE 195
Query: 304 EAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAI 360
EAE N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +
Sbjct: 196 EAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRM 247
Query: 361 AEKLDLKKNVVRVWFCNQRQKQKRMK 386
AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 248 AEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|348557566|ref|XP_003464590.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 2, transcription
factor 2-like [Cavia porcellus]
Length = 478
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 124/224 (55%), Gaps = 19/224 (8%)
Query: 173 PTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQ---HPD 229
PTPN QL + + G LP SH HP P L+ HP+
Sbjct: 139 PTPNLFQLPQQTQGALLTSQPRAGLPTQAVTRPTLPDSHFS----HPQPPKCLEPPSHPE 194
Query: 230 TDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
+D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L LS
Sbjct: 195 EPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFK 251
Query: 290 NMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRS 341
NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI + +
Sbjct: 252 NMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFA 310
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 311 LEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 354
>gi|297670608|ref|XP_002813455.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Pongo abelii]
Length = 291
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNQATNVMSTATGLHYSVPSCHYGNQPSTYGVMTGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|157278475|ref|NP_001098339.1| POU domain protein class V transcription factor 1 [Oryzias latipes]
gi|49341552|gb|AAT64911.1| POU domain protein class V transcription factor 1 [Oryzias latipes]
Length = 469
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 99/151 (65%), Gaps = 4/151 (2%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
ELE FA+ K +RI LG TQADVG AL NL SQ+TICRFE+L LS NM L
Sbjct: 254 EELEQFAKELKHKRITLGFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKL 310
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+LQ WL+EAE ++N + V K+++RTS+ + +LEAYF P+P+
Sbjct: 311 KPLLQRWLDEAET-SENPQDMYKIERVFADTRKRKRRTSLEGAVRSALEAYFIKCPKPNT 369
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I I++ L L+++VVRVWFCN+RQK KR+
Sbjct: 370 QEITHISDDLGLERDVVRVWFCNRRQKGKRL 400
>gi|297281438|ref|XP_002802100.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 6
[Macaca mulatta]
Length = 741
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 275 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 328
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 329 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 388
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 389 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 435
>gi|13431774|sp|Q28503.2|PIT1_MACMU RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
Length = 291
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTLVFYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|403272581|ref|XP_003928133.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Saimiri boliviensis boliviensis]
Length = 755
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 402
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 449
>gi|397508400|ref|XP_003824644.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Pan paniscus]
Length = 755
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 402
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 449
>gi|351699601|gb|EHB02520.1| POU domain, class 2, transcription factor 2 [Heterocephalus glaber]
Length = 871
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 135/264 (51%), Gaps = 37/264 (14%)
Query: 133 HHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNS 192
HH+ TP+ L PQ + GL PTPN QL + +
Sbjct: 407 HHLQTPAQFLLPQ-AQQSQPGLL-----------------PTPNLFQLPQQTQGALLTSQ 448
Query: 193 MMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRI 249
G LP H +P P L+ HP+ +D ELE FA FKQRRI
Sbjct: 449 PRAGLPTQAVTRPTLPDPHFS----YPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRI 504
Query: 250 KLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA 309
KLG TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 505 KLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMS 561
Query: 310 KNKRR-DPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 361
+ P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I IA
Sbjct: 562 VDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIA 620
Query: 362 EKLDLKKNVVRVWFCNQRQKQKRM 385
E+L ++K V+RVWFCN+RQK+KR+
Sbjct: 621 EQLHMEKEVIRVWFCNRRQKEKRI 644
>gi|297281436|ref|XP_002802099.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 5
[Macaca mulatta]
gi|355746170|gb|EHH50795.1| hypothetical protein EGM_01675 [Macaca fascicularis]
Length = 755
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 402
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 449
>gi|397508398|ref|XP_003824643.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Pan paniscus]
Length = 766
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 300 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 353
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 354 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 413
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 414 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 460
>gi|21927972|gb|AAM77920.1| OCT-1 protein [Homo sapiens]
Length = 755
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 402
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 449
>gi|311771667|ref|NP_001185712.1| POU domain, class 2, transcription factor 1 isoform 2 [Homo
sapiens]
gi|297662810|ref|XP_002809882.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Pongo abelii]
gi|332219435|ref|XP_003258861.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Nomascus leucogenys]
Length = 755
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 402
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 449
>gi|397508402|ref|XP_003824645.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Pan paniscus]
Length = 743
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|441634885|ref|XP_004089873.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Nomascus leucogenys]
gi|28202257|sp|P14859.2|PO2F1_HUMAN RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|12804507|gb|AAH01664.1| POU2F1 protein [Homo sapiens]
gi|13097741|gb|AAH03571.1| POU2F1 protein [Homo sapiens]
gi|30354477|gb|AAH52274.1| POU class 2 homeobox 1 [Homo sapiens]
gi|119611192|gb|EAW90786.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Homo
sapiens]
gi|119611193|gb|EAW90787.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Homo
sapiens]
Length = 743
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|397508404|ref|XP_003824646.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Pan paniscus]
Length = 703
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 237 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 290
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 291 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 350
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 351 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 397
>gi|158819067|ref|NP_001103648.1| POU domain, class 5, transcription factor 1 [Gallus gallus]
gi|116804640|gb|ABK27428.1| POU domain class 5 transcription factor 1 [Gallus gallus]
Length = 295
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 100/151 (66%), Gaps = 6/151 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIAL 294
ELE FA+ K +RI LG TQADVG AL L G + SQ+TICRFE+L LS NM L
Sbjct: 83 ELEQFAKDLKHKRIMLGFTQADVGLALGTL----YGKMFSQTTICRFEALQLSFKNMCKL 138
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+LQ WL EAE N + +A VL K+++RTSI K +LE++F +PS
Sbjct: 139 KPLLQRWLNEAE-NTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSP 197
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I+ IAE L+L K+VVRVWFCN+RQK KR+
Sbjct: 198 QEISQIAEDLNLDKDVVRVWFCNRRQKGKRL 228
>gi|208965378|dbj|BAG72703.1| POU class 2 homeobox 1 [synthetic construct]
Length = 741
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 275 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 328
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 329 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 388
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 389 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 435
>gi|35127|emb|CAA31767.1| unnamed protein product [Homo sapiens]
Length = 743
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|30584627|gb|AAP36566.1| Homo sapiens POU domain, class 2, transcription factor 1 [synthetic
construct]
gi|61373021|gb|AAX43959.1| POU domain class 2 transcription factor 1 [synthetic construct]
Length = 744
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|332811149|ref|XP_001157105.2| PREDICTED: POU domain, class 2, transcription factor 1 [Pan
troglodytes]
Length = 755
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 402
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 449
>gi|297281430|ref|XP_001088884.2| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Macaca mulatta]
Length = 766
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 300 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 353
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 354 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 413
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 414 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 460
>gi|297281434|ref|XP_002802098.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Macaca mulatta]
Length = 743
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|296229894|ref|XP_002760470.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Callithrix jacchus]
Length = 755
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 402
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 449
>gi|297281432|ref|XP_002802097.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Macaca mulatta]
Length = 703
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 237 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 290
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 291 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 350
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 351 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 397
>gi|311771673|ref|NP_001185715.1| POU domain, class 2, transcription factor 1 isoform 3 [Homo
sapiens]
gi|194381844|dbj|BAG64291.1| unnamed protein product [Homo sapiens]
Length = 703
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 237 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 290
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 291 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 350
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 351 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 397
>gi|343959928|dbj|BAK63821.1| POU domain, class 2, transcription factor 1 [Pan troglodytes]
Length = 743
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|311771665|ref|NP_002688.3| POU domain, class 2, transcription factor 1 isoform 1 [Homo
sapiens]
gi|119611194|gb|EAW90788.1| POU domain, class 2, transcription factor 1, isoform CRA_b [Homo
sapiens]
Length = 766
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 300 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 353
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 354 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 413
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 414 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 460
>gi|297281428|ref|XP_002802096.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Macaca mulatta]
Length = 769
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 303 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 356
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 357 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 416
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 417 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 463
>gi|296229898|ref|XP_002760472.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Callithrix jacchus]
Length = 741
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 275 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 328
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 329 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 388
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 389 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 435
>gi|440894140|gb|ELR46671.1| POU domain, class 2, transcription factor 2, partial [Bos grunniens
mutus]
Length = 594
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 185 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 241
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 242 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 300
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 301 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 347
>gi|296229896|ref|XP_002760471.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Callithrix jacchus]
gi|390477169|ref|XP_002760473.2| PREDICTED: POU domain, class 2, transcription factor 1 isoform 5
[Callithrix jacchus]
Length = 743
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|403272579|ref|XP_003928132.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Saimiri boliviensis boliviensis]
Length = 766
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 300 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 353
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 354 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 413
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 414 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 460
>gi|403272585|ref|XP_003928135.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 4
[Saimiri boliviensis boliviensis]
Length = 703
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 237 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 290
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 291 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 350
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 351 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 397
>gi|338720782|ref|XP_003364248.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Equus caballus]
Length = 317
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 147/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLCTYFSVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + SS YG S+ + H+ H H P++
Sbjct: 84 CHYGNQSSTYGVMAGSLTPCLYKFPDHT----LGHGFPPMHQPLLAEDPAAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|296229892|ref|XP_002760469.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Callithrix jacchus]
Length = 703
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 237 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 290
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 291 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 350
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 351 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 397
>gi|53854346|gb|AAU95617.1| POU domain transcription factor Oct-2 C3 isoform [Mus musculus]
Length = 544
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 194 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 250
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 251 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 309
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 310 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 356
>gi|403272583|ref|XP_003928134.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Saimiri boliviensis boliviensis]
Length = 743
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|296233935|ref|XP_002762230.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Callithrix jacchus]
Length = 467
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|16950568|gb|AAK26108.2|AF231942_1 class III POU protein [Haliotis asinina]
Length = 224
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 96/142 (67%), Gaps = 8/142 (5%)
Query: 245 KQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEE 304
K RRIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEE
Sbjct: 1 KDRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEE 57
Query: 305 AEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 363
A++ + P + + A G K++KRTSI K +LE +F QP+PS +I+ +A++
Sbjct: 58 ADSTTGS----PTSIDKIAAQGRKRKKRTSIEVTVKGALENHFLKQPKPSAAEISQLADQ 113
Query: 364 LDLKKNVVRVWFCNQRQKQKRM 385
L L+K VVRVWFCN+RQK+KRM
Sbjct: 114 LQLEKEVVRVWFCNRRQKEKRM 135
>gi|126336920|ref|XP_001379871.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Monodelphis domestica]
Length = 286
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 135/260 (51%), Gaps = 32/260 (12%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H D L + ++ ++T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAADCLPASNHATNVVSTATSLHYSVPSCHYGNQQSTYGVMTGSLTPCLYKFPDHA- 85
Query: 206 ALPASHHHGATHHPVM---PPGLQHPD------------TDTDP---RELEAFAERFKQR 247
SH H P++ P + TD D +ELE FA FK R
Sbjct: 86 ---LSHGFPPMHQPLLGDDPTAIDFKQEFRRKNKSVEEPTDMDSPEIQELEKFANEFKLR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAE- 198
Query: 308 QAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 366
Q D + A E+KRKR T+I+ K +LE YF Q +PS ++I +AE L+L
Sbjct: 199 QVGALYNDK-----VGANERKRKRRTTISIAAKEALERYFGGQSKPSSQEIMRMAEGLNL 253
Query: 367 KKNVVRVWFCNQRQKQKRMK 386
+K VVRVWFCN+RQ++KR+K
Sbjct: 254 EKEVVRVWFCNRRQREKRVK 273
>gi|242014342|ref|XP_002427850.1| protein nubbin, putative [Pediculus humanus corporis]
gi|212512319|gb|EEB15112.1| protein nubbin, putative [Pediculus humanus corporis]
Length = 447
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 98/148 (66%), Gaps = 6/148 (4%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 259 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 315
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLP--AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 357
WLE+A++ N + P P G +++KRTSI + +LE F P+P+ E+I
Sbjct: 316 KWLEDADSSLTNPNSLTN-PLTTPEAIGRRRKKRTSIETTVRVALEKAFLQNPKPTSEEI 374
Query: 358 AAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
A +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 375 AVLADNLTMEKEVVRVWFCNRRQKEKRI 402
>gi|395526854|ref|XP_003765570.1| PREDICTED: pituitary-specific positive transcription factor 1
[Sarcophilus harrisii]
Length = 286
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 103/161 (63%), Gaps = 13/161 (8%)
Query: 230 TDTDP---RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
TD D +ELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L L
Sbjct: 122 TDMDSPEIQELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQL 178
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAY 345
S N LK IL WL+EAE Q D + A E+KRKR T+I+ K +LE Y
Sbjct: 179 SFKNACKLKSILSKWLDEAE-QVGALYNDK-----VGANERKRKRRTTISIAAKEALERY 232
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 233 FGGQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 273
>gi|426388924|ref|XP_004060879.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 4
[Gorilla gorilla gorilla]
Length = 467
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|333360878|ref|NP_001193955.1| POU domain, class 2, transcription factor 2 isoform 3 [Homo
sapiens]
gi|35129|emb|CAA37562.1| unnamed protein product [Homo sapiens]
gi|189363|gb|AAA36389.1| Oct-2 factor [Homo sapiens]
Length = 467
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|19880480|gb|AAM00354.1|AF364594_1 pituitary-specific transcription factor [Plecoglossus altivelis]
Length = 358
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 156/333 (46%), Gaps = 49/333 (14%)
Query: 92 SDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS---------GALPASHHHVATPSLLL 142
+D TP H+ GPS S++ H H G+ P H+ TP
Sbjct: 30 ADCTPATSHTHNMVSTGPSGLSLVQSSKRSHMHLSTSALGNALGSAPPGLHYPMTPCHYG 89
Query: 143 FPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHH 202
Q ++ M EML + S L S P PN ++ ++ S+ + H
Sbjct: 90 NQQTTYGMMAAQEMLSASISQTRILQTCSVPHPN--MVNGANTLQGSLTPCLYKFPEHSL 147
Query: 203 HSGALPASHHHGATHHPVMPPGLQHPD--------------------TDTDP---RELEA 239
G+ SH+ + +PP L + D D RELE
Sbjct: 148 GGGSCALSHNFSS-----LPPSLLSEELSMGEMKPDPRRRNRPPEDPPDMDSPQIRELER 202
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL
Sbjct: 203 FANDFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILA 259
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIA 358
WL+EAE QA + + E+KRKR T+I+ K +LE F + +PS ++I
Sbjct: 260 KWLDEAE-QAGALFNEK-----MGMNERKRKRRTTISLGAKEALERSFGEKSKPSSQEIV 313
Query: 359 AIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
IAE L L+K VVRVWFCN+RQ++KR+K + H
Sbjct: 314 RIAEGLHLEKEVVRVWFCNRRQREKRVKTSLHH 346
>gi|116874846|dbj|BAF36053.1| pituitary specific transcription factor 1 [Anas platyrhynchos]
gi|116874848|dbj|BAF36054.1| pituitary specific transcription factor 1 [Anas platyrhynchos]
Length = 335
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/302 (36%), Positives = 150/302 (49%), Gaps = 49/302 (16%)
Query: 121 HHHHSGALPASHH---------HVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMT 165
HH + LP S+H H + PS Q S +G M G+ EML + S
Sbjct: 28 HHSAAECLPVSNHATNVVSTGLHYSVPSCHYGNQPSTYGVMAGIKPATPEMLSASLSQSR 87
Query: 166 TLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVM---- 221
L S P PN ++S S S+ + H + + H H ++
Sbjct: 88 ILQTCSMPHPNI--VNSVSTLQSSLTPCLYKFPEHALSASSCALGHGFTPMHQSLLGDDP 145
Query: 222 ------------PPGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA +
Sbjct: 146 TAADFKQEFRRKSKSVEEPIDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH- 204
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAG 325
SQ+TICRFE+L LS N LK IL WLEEAE N++ +
Sbjct: 205 --GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVN 254
Query: 326 EKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR
Sbjct: 255 ERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKR 314
Query: 385 MK 386
+K
Sbjct: 315 VK 316
>gi|444730672|gb|ELW71046.1| POU domain, class 2, transcription factor 2 [Tupaia chinensis]
Length = 551
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 109/179 (60%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 152 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 208
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 209 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 267
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 268 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 326
>gi|297277174|ref|XP_002808241.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 2, transcription
factor 2-like [Macaca mulatta]
Length = 467
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|193787155|dbj|BAG52361.1| unnamed protein product [Homo sapiens]
Length = 741
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/167 (44%), Positives = 106/167 (63%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 275 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 328
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + ++P + +++KRTSI
Sbjct: 329 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIKGLSRRRKKRTSIETNI 388
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 389 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 435
>gi|88174219|gb|ABD39236.1| pituitary transcription factor 1 [Ovis aries]
Length = 291
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 128 LPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
+P + AT L++ P + L + + ++ M+T T + P+ H + SS YG
Sbjct: 13 IPLNSESSATLPLIMHPS----AAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYG 68
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP-DT 230
S+ + H+ SH H P++ ++ P D
Sbjct: 69 VMAGSLTPCLYKFPDHT----MSHGFPPMHQPLLSEDPTAADFKQELRRKSKLIEEPIDM 124
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 125 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 181
Query: 290 NMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE +F
Sbjct: 182 NACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|355560592|gb|EHH17278.1| hypothetical protein EGK_13644, partial [Macaca mulatta]
Length = 527
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 61 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 114
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 115 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 174
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 175 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 221
>gi|348567180|ref|XP_003469379.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Cavia porcellus]
Length = 317
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 149 DMDSPEIRELEKFANEFKMRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 205
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 206 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISISAKDALER 257
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 258 HFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|344270145|ref|XP_003406906.1| PREDICTED: POU domain, class 2, transcription factor 2 [Loxodonta
africana]
Length = 467
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|44829051|emb|CAD70238.1| pituitary specific POU domain transcription factor 1 [Ovis aries]
gi|220682206|gb|ACL80213.1| Pit-1 [Capra hircus]
Length = 291
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 128 LPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
+P + AT L++ P + L + + ++ M+T T + P+ H + SS YG
Sbjct: 13 IPLNSESSATLPLIMHPS----AAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYG 68
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP-DT 230
S+ + H+ SH H P++ ++ P D
Sbjct: 69 VMAGSLTPCLYKFPDHT----LSHGFPPMHQPLLSEDPTAADFKQELRRKSKLIEEPIDM 124
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 125 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 181
Query: 290 NMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE +F
Sbjct: 182 NACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|402858090|ref|XP_003893559.1| PREDICTED: POU domain, class 2, transcription factor 1, partial
[Papio anubis]
Length = 669
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 203 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 256
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 257 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 316
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 317 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 363
>gi|395526596|ref|XP_003765446.1| PREDICTED: POU domain, class 3, transcription factor 1 [Sarcophilus
harrisii]
Length = 265
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 27 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 83
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + G K++KRTSI K +LE+
Sbjct: 84 QLSFKNMCKLKPLLNKWLEETDSSTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 140
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRV CN+RQK+KRM AA
Sbjct: 141 HFLKCPKPSAHEITGLADSLQLEKEVVRVCCCNRRQKEKRMTPAA 185
>gi|4456140|emb|CAB37356.1| pituitary specific transcription factor [Gallus gallus]
Length = 335
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 148/302 (49%), Gaps = 49/302 (16%)
Query: 121 HHHHSGALPASHH---------HVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMT 165
HH LP S+H H + PS Q S +G M G+ EML + S
Sbjct: 28 HHSAGECLPVSNHATNVVSTGLHYSVPSCHYGNQASTYGVMAGIKPATPEMLSASLSQSR 87
Query: 166 TLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP--- 222
L S P PN ++ S S+ + H + + H H ++
Sbjct: 88 ILQTCSMPHPNV--VNGVSTLQSSLTPCLYKFPEHALSASSCALGHSFTPMHQTLLSDDP 145
Query: 223 -------------PGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA +
Sbjct: 146 TASDFKQEFRRKSKSVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH- 204
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAG 325
SQ+TICRFE+L LS N LK IL WLEEAE N++ +
Sbjct: 205 --GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVN 254
Query: 326 EKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR
Sbjct: 255 ERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKR 314
Query: 385 MK 386
+K
Sbjct: 315 VK 316
>gi|354501601|ref|XP_003512879.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Cricetulus griseus]
Length = 317
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 145/289 (50%), Gaps = 40/289 (13%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q + L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----NCLHTYFSVTTMGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG + + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGGLTPCLYKFPDHT----LSHGFPPLHQPLLAEDPTASEFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAP 337
CRFE+L LS N LK IL WLEEAE + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYSEK------VGANERKRKRRTTISIA 250
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 251 AKDALERHFGQQSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|410053962|ref|XP_001142320.3| PREDICTED: POU domain, class 2, transcription factor 2 [Pan
troglodytes]
Length = 455
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 169 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 225
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 226 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 284
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 285 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 343
>gi|348567178|ref|XP_003469378.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Cavia porcellus]
Length = 291
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPEHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPLHQPLLAEDPMASEFKQELRRKSKLVEEPVDMDSPEIRELEKFANEFKMR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISISAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|296491579|tpg|DAA33622.1| TPA: pituitary-specific positive transcription factor 1 [Bos
taurus]
gi|377655102|gb|AFB73754.1| pituitary specific transcription factor [Bubalus bubalis]
Length = 291
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 128 LPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
+P + AT L++ P + L + + ++ M+T T + P+ H + SS YG
Sbjct: 13 IPLNSESSATLPLIMHPS----AAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYG 68
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP-DT 230
S+ + H+ SH H P++ ++ P D
Sbjct: 69 VMAGSLTPCLYKFPDHT----LSHGFPPMHQPLLSEDPTAADFKQELRRKSKLVEEPIDM 124
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 125 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 181
Query: 290 NMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE +F
Sbjct: 182 NACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|426388920|ref|XP_004060877.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 2
[Gorilla gorilla gorilla]
Length = 479
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|218963103|gb|ACJ13294.2| pituitary-specific transcription factor 1 [Anser anser]
Length = 336
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 114/301 (37%), Positives = 149/301 (49%), Gaps = 46/301 (15%)
Query: 121 HHHHSGALPASHH----------HVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSM 164
HH + LP S+H H + PS Q S +G M G+ EML + S
Sbjct: 28 HHSAAECLPVSNHATNSCLYKRLHYSVPSCHYGNQPSTYGVMAGIKPATPEMLSASLSQS 87
Query: 165 TTLTPMSDPTPN----PHQLHSS---SMY-----GPSMNSMMTGHHHHHHHSGAL---PA 209
L S P PN L SS +Y S +S GH H L P
Sbjct: 88 RILQTCSMPHPNIVNGVSTLQSSLTPCLYKFPEHALSASSCALGHGFTPMHQSLLSDDPT 147
Query: 210 SHHHGATHHPVMPPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLP 268
+ G + D D+ + RELE FA FK RRIKLG TQ +VG+ALA +
Sbjct: 148 AADFKQEFRRKSKSGEEPIDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH-- 205
Query: 269 GVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGE 326
SQ+TICRFE+L LS N LK IL WLEEAE N++ + E
Sbjct: 206 -GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNE 256
Query: 327 KKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+
Sbjct: 257 RKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRV 316
Query: 386 K 386
K
Sbjct: 317 K 317
>gi|426332607|ref|XP_004027892.1| PREDICTED: POU domain, class 2, transcription factor 1 [Gorilla
gorilla gorilla]
Length = 624
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 303 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 356
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 357 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 416
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 417 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 463
>gi|344277183|ref|XP_003410383.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Loxodonta africana]
Length = 317
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 149/291 (51%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L + +++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLRIHFLVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + +S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQASTYGVMAGSLTPCLYKFPDHT----LSHGFPPMHQPLLAEDPTAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPVDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|355712856|gb|AES04491.1| POU class 2 homeobox 2 [Mustela putorius furo]
Length = 458
Score = 144 bits (362), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|327268734|ref|XP_003219151.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Anolis
carolinensis]
Length = 863
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 105/168 (62%), Gaps = 10/168 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 399 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 452
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 453 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGAEGLNRRRKKRTSIETNI 512
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 513 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRIN 560
>gi|333360875|ref|NP_001193954.1| POU domain, class 2, transcription factor 2 isoform 1 [Homo
sapiens]
gi|123402|sp|P09086.3|PO2F2_HUMAN RecName: Full=POU domain, class 2, transcription factor 2; AltName:
Full=Lymphoid-restricted immunoglobulin octamer-binding
protein NF-A2; AltName: Full=Octamer-binding protein 2;
Short=Oct-2; AltName: Full=Octamer-binding transcription
factor 2; Short=OTF-2
Length = 479
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|338710506|ref|XP_001916742.2| PREDICTED: POU domain, class 2, transcription factor 2 isoform 2
[Equus caballus]
Length = 492
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 194 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 250
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 251 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 309
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 310 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 368
>gi|112421204|ref|NP_001036325.1| pituitary-specific positive transcription factor 1 [Macaca mulatta]
gi|1289508|gb|AAB51352.1| pit-1/GHF-1 [Macaca mulatta]
Length = 317
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/295 (35%), Positives = 149/295 (50%), Gaps = 52/295 (17%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQ----MSHHGMDGLEMLDSISSSMTTLTPMSD 172
HH + LP S+H PS+L Q + H + +++ T T +
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTPKCLCTHFL--------VTTLGNTATGLHY 79
Query: 173 PTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG-------- 224
P+ H + S YG S+ + H+ SH H P++
Sbjct: 80 SVPSCHYGNQPSTYGVMAGSLTLVFYKFPDHT----LSHGFPPIHQPLLAEDPTAADFKQ 135
Query: 225 --------LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + S
Sbjct: 136 ELRRKSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFS 192
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR- 331
Q+TICRFE+L LS N LK IL WLEEAE N++ + A E+KRKR
Sbjct: 193 QTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRR 244
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
T+I+ K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 245 TTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|167540608|gb|ABZ81984.1| POU domain transcription factor 1 [Capra hircus]
Length = 291
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 128 LPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
+P + AT L++ P + L + + ++ M+T T + P+ H + SS YG
Sbjct: 13 IPLNSESSATLPLIMHPS----AAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYG 68
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP-DT 230
S+ + H+ SH H P++ ++ P D
Sbjct: 69 VMAGSLTPCLYKFPDHT----LSHGFPPMHQPLLSEDPTAADFKQELRRKSKLVEEPIDM 124
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 125 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 181
Query: 290 NMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE +F
Sbjct: 182 NACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRKTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|189413|gb|AAA59978.1| octamer-binding transcription factor, partial [Homo sapiens]
Length = 478
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 180 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 236
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 237 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 295
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 296 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 354
>gi|397523056|ref|XP_003831561.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Pan paniscus]
Length = 317
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLCTHFSVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLTPCLYKFPDHT----LSHGFPPIHQPLLAEDPTAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|338710508|ref|XP_001916739.2| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Equus caballus]
Length = 476
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 190 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 246
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 247 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 305
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 306 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 352
>gi|326676458|ref|XP_003200582.1| PREDICTED: POU domain, class 2, transcription factor 2 [Danio
rerio]
Length = 469
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 94 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMG--KLYG-NDFSQTTISRFEALNL 150
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE A + + LP G +++KRTSI
Sbjct: 151 SFKNMCKLKPLLEKWLSDAETMAIDNMLPSPSSLSSPLLGFEGLP-GRRRKKRTSIETNV 209
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I +AE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 210 RIALERNFISNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRI 256
>gi|254588028|ref|NP_035268.2| POU domain, class 2, transcription factor 2 isoform 2 [Mus
musculus]
Length = 479
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|307335|gb|AAA60093.1| Pit-1/GHF-1 variant [Homo sapiens]
gi|311926|emb|CAA51017.1| transcription factor [Homo sapiens]
Length = 291
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKYALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|326913145|ref|XP_003202901.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Meleagris gallopavo]
Length = 363
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 104/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 194 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 250
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 251 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIAAKEALER 302
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 303 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 344
>gi|114588000|ref|XP_526244.2| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Pan troglodytes]
Length = 291
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|426341281|ref|XP_004035971.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Gorilla gorilla gorilla]
Length = 317
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLCTHFSVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLTPCLYKFPDHT----LSHGFPPIHQPLLAEDPTAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPVDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|402905714|ref|XP_003915659.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 2
[Papio anubis]
Length = 479
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|403273110|ref|XP_003928366.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Saimiri boliviensis boliviensis]
Length = 317
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q + L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMPTVPSILSLIQTP----ECLCTHFSVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLTPCLYKFPDHT----LSHGFPPIHQPLLAEDPTAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
+ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVDEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|170650730|ref|NP_001116229.1| pituitary-specific positive transcription factor 1 isoform beta
[Homo sapiens]
gi|488129|dbj|BAA02291.1| pituitary-specific POU-domain DNA binding factor [Homo sapiens]
gi|119589273|gb|EAW68867.1| POU domain, class 1, transcription factor 1 (Pit1, growth hormone
factor 1), isoform CRA_b [Homo sapiens]
Length = 317
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLCTHFSVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLTPCLYKFPDHT----LSHGFPPIHQPLLAEDPTAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|332864297|ref|XP_003318250.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Pan troglodytes]
Length = 317
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLCTHFSVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLTPCLYKFPDHT----LSHGFPPIHQPLLAEDPTAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|345784981|ref|XP_541592.3| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Canis lupus familiaris]
Length = 479
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|410970231|ref|XP_003991591.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Felis catus]
Length = 317
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 147/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L ++S T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLCAYFLVTSLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLAPCLYKFPDHT----LSHGFPPMHQPLLAEDPTVTDFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLIEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|414324|gb|AAA40767.1| octamer-binding transcription factor [Rattus sp.]
Length = 479
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 193 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 249
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 250 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 308
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 309 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|426388918|ref|XP_004060876.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Gorilla gorilla gorilla]
Length = 463
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|53484|emb|CAA41005.1| Oct2.2 transcription factor [Mus musculus]
Length = 479
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|426388922|ref|XP_004060878.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Gorilla gorilla gorilla]
Length = 400
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 165 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 221
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 222 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 280
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|57164355|ref|NP_001009350.1| pituitary-specific positive transcription factor 1 [Ovis aries]
gi|3023968|sp|P79364.1|PIT1_SHEEP RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|1857778|gb|AAB48500.1| Pit-1 [Ovis aries]
Length = 291
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 128 LPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
+P + AT L++ P + L + + ++ M+T T + P+ H + SS YG
Sbjct: 13 IPLNSESSATLPLIMHPS----AAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYG 68
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP-DT 230
S+ + H+ SH H P++ ++ P D
Sbjct: 69 VMAGSLTPCLYEFPDHT----LSHGFPPMHQPLLSEDPTAADFKQELRRKSKLIEEPIDM 124
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 125 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 181
Query: 290 NMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE +F
Sbjct: 182 NACKLKAILFKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|410983132|ref|XP_003997897.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 2, transcription
factor 2 [Felis catus]
Length = 492
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 194 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 250
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 251 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 309
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 310 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 368
>gi|351713127|gb|EHB16046.1| POU domain, class 5, transcription factor 1 [Heterocephalus glaber]
Length = 361
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 125/233 (53%), Gaps = 27/233 (11%)
Query: 173 PTPNPHQLHSSSMY-GP--SMNSMMTGHHHHHHHSGALPA---SHHHGATHHPVM----- 221
P P P++ + Y GP M + G G L A S GA+ P
Sbjct: 62 PCPQPYEFCGGAAYPGPQVGMGLVPQGGLESSQPEGELGAGVDSSSEGASPEPCATHTGV 121
Query: 222 ---------PPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
P + D + +ELE FA+ KQ+RI LG TQADVG L + G
Sbjct: 122 VKVEKEKLEPNPEESQDINALQKELEQFAKLLKQKRITLGYTQADVGLTLGAI----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + S++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQRWVEEADNNNENLQERCKTESLMQA--RKRKR 235
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 TSIENQVRGNLENMFLQCPKPTLQQISRIAQQLGLEKDVVRVWFCNRRQKGKR 288
>gi|332212154|ref|XP_003255185.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Nomascus leucogenys]
Length = 317
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L S+++ T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLCTHFSVTTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLTPCLYKFPDHT----LSHGFPPIHQPLLSEDPTAADFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|397523054|ref|XP_003831560.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Pan paniscus]
Length = 291
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|332212152|ref|XP_003255184.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Nomascus leucogenys]
Length = 291
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLSEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|226218|prf||1501353A lymphoid specific transcription factor
Length = 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|6226827|sp|Q9YGL7.1|PIT1_CHICK RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|4456142|emb|CAB37357.1| pituitary specific transcription factor [Gallus gallus]
Length = 363
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 104/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 194 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 250
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 251 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALER 302
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 303 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 344
>gi|4505959|ref|NP_002689.1| POU domain, class 2, transcription factor 2 isoform 2 [Homo
sapiens]
gi|35167|emb|CAA32040.1| unnamed protein product [Homo sapiens]
gi|339496|gb|AAA36732.1| lymphoid specific transcription factor [Homo sapiens]
gi|307686331|dbj|BAJ21096.1| POU class 2 homeobox 2 [synthetic construct]
Length = 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|4505955|ref|NP_000297.1| pituitary-specific positive transcription factor 1 isoform alpha
[Homo sapiens]
gi|402858759|ref|XP_003893855.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Papio anubis]
gi|123408|sp|P28069.1|PIT1_HUMAN RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|35475|emb|CAA44295.1| transcription factor [Homo sapiens]
gi|219998|dbj|BAA01068.1| Pit-1/GHF-1 [Homo sapiens]
gi|119589272|gb|EAW68866.1| POU domain, class 1, transcription factor 1 (Pit1, growth hormone
factor 1), isoform CRA_a [Homo sapiens]
gi|157169656|gb|AAI52852.1| POU class 1 homeobox 1 [synthetic construct]
gi|306921579|dbj|BAJ17869.1| POU class 1 homeobox 1 [synthetic construct]
Length = 291
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|351542193|ref|NP_001234923.1| POU domain, class 2, transcription factor 2 isoform 4 [Homo
sapiens]
gi|13543913|gb|AAH06101.1| POU2F2 protein [Homo sapiens]
gi|30583715|gb|AAP36106.1| POU domain, class 2, transcription factor 2 [Homo sapiens]
gi|119577506|gb|EAW57102.1| POU domain, class 2, transcription factor 2, isoform CRA_e [Homo
sapiens]
Length = 400
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 165 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 221
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 222 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 280
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|426341279|ref|XP_004035970.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Gorilla gorilla gorilla]
Length = 291
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPVDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|414326|gb|AAA19248.1| octamer-binding transcription factor [Rattus sp.]
Length = 495
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 209 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 265
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 266 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 324
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 325 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 371
>gi|53486|emb|CAA41006.1| Oct2.3 transcription factor [Mus musculus]
Length = 485
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 199 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 255
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 256 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 314
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 315 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 361
>gi|254588026|ref|NP_001157027.1| POU domain, class 2, transcription factor 2 isoform 3 [Mus
musculus]
gi|76779322|gb|AAI05921.1| Pou2f2 protein [Mus musculus]
Length = 485
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 199 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 255
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 256 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 314
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 315 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 361
>gi|301777157|ref|XP_002923986.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Ailuropoda melanoleuca]
gi|345784985|ref|XP_866233.2| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Canis lupus familiaris]
Length = 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|35165|emb|CAA32039.1| unnamed protein product [Homo sapiens]
Length = 474
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 176 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 232
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 233 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 291
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 292 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 350
>gi|426242960|ref|XP_004015336.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Ovis aries]
Length = 466
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 169 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 225
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 226 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 284
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 285 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 343
>gi|414328|gb|AAA40768.1| octamer-binding transcription factor [Rattus sp.]
Length = 456
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 170 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 226
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 227 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 285
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 286 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 332
>gi|431922720|gb|ELK19625.1| POU domain, class 2, transcription factor 2 [Pteropus alecto]
Length = 660
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/178 (44%), Positives = 106/178 (59%), Gaps = 13/178 (7%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 243 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 299
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA-------KNKRRDPDAPSVLPAGEK 327
Q+TI RFE+L LS NM LKP+L+ WL +AE + N+ P+ G +
Sbjct: 300 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPNLGFDGLPGRR 359
Query: 328 KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 360 RKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 417
>gi|395854062|ref|XP_003799517.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 4
[Otolemur garnettii]
Length = 400
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 165 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 221
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 222 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 280
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|291412133|ref|XP_002722348.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 2
[Oryctolagus cuniculus]
Length = 483
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 197 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 253
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 254 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 312
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 313 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 359
>gi|449283865|gb|EMC90459.1| Pituitary-specific positive transcription factor 1 [Columba livia]
Length = 363
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 140/278 (50%), Gaps = 36/278 (12%)
Query: 134 HVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
H + PS Q S +G M G+ EML + S L S P PN ++S S
Sbjct: 78 HYSVPSCHYGNQSSTYGVMAGIKPATPEMLSASLSQSRILQTCSMPHPNV--VNSVSTLQ 135
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP----------------PGLQHP-DT 230
++ + H + + H H P++ ++ P D
Sbjct: 136 SNLTPCLYKFPEHALSASSCALGHSFAPMHQPLLTDDPTAADFKQEFRRKNKSVEEPIDM 195
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 196 DSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 252
Query: 290 NMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAV 348
N LK IL WLEEAE + E+KRKR T+I+ K +LE +F
Sbjct: 253 NACKLKSILSKWLEEAEQVGALYSEK------VGVNERKRKRRTTISIAAKEALERHFGE 306
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 307 QSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 344
>gi|350408989|ref|XP_003488574.1| PREDICTED: hypothetical protein LOC100749404 [Bombus impatiens]
Length = 517
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 298 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 354
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLP--AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P++ P P G +++KRTSI + +LE F P+P+
Sbjct: 355 KWLEDAD----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTS 410
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 411 EEITVLADTLAMEKEVVRVWFCNRRQKEKRI 441
>gi|281352526|gb|EFB28110.1| hypothetical protein PANDA_013233 [Ailuropoda melanoleuca]
Length = 471
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 174 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 230
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 231 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 289
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 290 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 348
>gi|414330|gb|AAA41734.1| octamer-binding transcription factor [Rattus sp.]
Length = 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|39644712|gb|AAH07388.1| POU2F1 protein [Homo sapiens]
Length = 561
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 185 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 238
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 239 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 298
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 299 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 345
>gi|387942549|ref|NP_001252513.1| POU domain, class 5, transcription factor 1 [Callithrix jacchus]
gi|340744006|dbj|BAK53234.1| POU domain containing class 5 transcription factor 1 [Callithrix
jacchus]
gi|381141669|gb|AFF57805.1| OCT4 [Callithrix jacchus]
Length = 360
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 127/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +GA S+ GA+ P +PPG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGAGVESNSEGASPEPCTIPPGA 121
Query: 226 -------------QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNTEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + SLE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|426242966|ref|XP_004015339.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 4
[Ovis aries]
Length = 472
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 187 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 243
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 244 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 302
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 303 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 349
>gi|91831|pir||JH0597 transcription factor Oct-2, splice form Oct-2d - mouse
Length = 232
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 13 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 69
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 70 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 128
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 129 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 187
>gi|410970229|ref|XP_003991590.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Felis catus]
Length = 291
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLAPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPMHQPLLAEDPTVTDFKQELRRKSKLIEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|395854056|ref|XP_003799514.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Otolemur garnettii]
Length = 474
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 176 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 232
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 233 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 291
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 292 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 350
>gi|395854058|ref|XP_003799515.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 2
[Otolemur garnettii]
Length = 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|149058153|gb|EDM09310.1| POU domain, class 2, transcription factor 1, isoform CRA_f [Rattus
norvegicus]
Length = 757
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 451
>gi|402858761|ref|XP_003893856.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Papio anubis]
gi|355559253|gb|EHH15981.1| hypothetical protein EGK_11197 [Macaca mulatta]
gi|355746334|gb|EHH50948.1| hypothetical protein EGM_10255 [Macaca fascicularis]
Length = 317
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 149 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 205
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 206 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 257
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 258 HFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|254588030|ref|NP_001157028.1| POU domain, class 2, transcription factor 2 isoform 1 [Mus
musculus]
gi|172046692|sp|Q00196.4|PO2F2_MOUSE RecName: Full=POU domain, class 2, transcription factor 2; AltName:
Full=Lymphoid-restricted immunoglobulin octamer-binding
protein NF-A2; AltName: Full=Octamer-binding protein 2;
Short=Oct-2; AltName: Full=Octamer-binding transcription
factor 2; Short=OTF-2
gi|53854343|gb|AAU95616.1| POU domain transcription factor Oct-2 [Mus musculus]
gi|74355743|gb|AAI04489.1| Pou2f2 protein [Mus musculus]
gi|76779828|gb|AAI05922.1| Pou2f2 protein [Mus musculus]
gi|111494177|gb|AAI05648.1| Pou2f2 protein [Mus musculus]
Length = 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|340712794|ref|XP_003394940.1| PREDICTED: hypothetical protein LOC100644394 isoform 2 [Bombus
terrestris]
Length = 517
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 298 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 354
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLP--AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P++ P P G +++KRTSI + +LE F P+P+
Sbjct: 355 KWLEDAD----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTS 410
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 411 EEITVLADTLAMEKEVVRVWFCNRRQKEKRI 441
>gi|170032369|ref|XP_001844054.1| nubbin [Culex quinquefasciatus]
gi|167872340|gb|EDS35723.1| nubbin [Culex quinquefasciatus]
Length = 507
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/177 (47%), Positives = 112/177 (63%), Gaps = 12/177 (6%)
Query: 218 HPVMPPGLQ-HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
HP P L+ P+ TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+
Sbjct: 282 HPAAPRALEPSPEETTDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQT 338
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLP--------AGEKK 328
TI RFE+L LS NM LKP+LQ WLE+A++ +N +PS L G ++
Sbjct: 339 TISRFEALNLSFKNMCKLKPLLQKWLEDADSSIQNPGGRMFSPSALTNTATTPEIVGRRR 398
Query: 329 RKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+KRTSI + +LE F V +P+ E+I ++A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 399 KKRTSIETSVRVALEKAFLVNSKPTSEEITSLADSLCMEKEVVRVWFCNRRQKEKRI 455
>gi|402905712|ref|XP_003915658.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Papio anubis]
Length = 463
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|148692343|gb|EDL24290.1| POU domain, class 2, transcription factor 2, isoform CRA_a [Mus
musculus]
Length = 402
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 167 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 223
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 224 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 282
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 283 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 341
>gi|53482|emb|CAA41004.1| Oct2.1 transcription factor [Mus musculus]
Length = 463
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|291412131|ref|XP_002722347.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Oryctolagus cuniculus]
Length = 461
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 131/265 (49%), Gaps = 55/265 (20%)
Query: 133 HHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNS 192
HH+ P+ L PQ + G GL PTPN QL
Sbjct: 116 HHLQPPAQFLLPQ-AQQGQPGLL-----------------PTPNLFQLP----------- 146
Query: 193 MMTGHHHHHHHSGALPASHHHGATHHPVMPPGL----QHPDTDTDPRELEAFAERFKQRR 248
GAL S P PP HP+ +D ELE FA FKQRR
Sbjct: 147 --------QQTQGALLTSQPRAGL--PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRR 196
Query: 249 IKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ 308
IKLG TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 IKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETM 253
Query: 309 AKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAI 360
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I I
Sbjct: 254 SVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLI 312
Query: 361 AEKLDLKKNVVRVWFCNQRQKQKRM 385
AE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 313 AEQLHMEKEVIRVWFCNRRQKEKRI 337
>gi|397481158|ref|XP_003811822.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Pan paniscus]
Length = 473
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 188 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 244
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 245 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 303
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 304 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 350
>gi|149742238|ref|XP_001501308.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Equus caballus]
Length = 291
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 145/283 (51%), Gaps = 50/283 (17%)
Query: 125 SGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSS 184
S ALP HH A L +S+H ++ M+T T + P+ H + SS
Sbjct: 20 SAALPLIMHHSAAECL----PVSNHA----------TNVMSTATGLHYSVPSCHYGNQSS 65
Query: 185 MYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP 228
YG S+ + H+ H H P++ ++ P
Sbjct: 66 TYGVMAGSLTPCLYKFPDHT----LGHGFPPMHQPLLAEDPAAADFKQELRRKSKLVEEP 121
Query: 229 -DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L L
Sbjct: 122 IDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQL 178
Query: 287 SHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLE 343
S N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 179 SFKNACKLKAILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIAAKDALE 230
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 231 RHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|47523594|ref|NP_999429.1| POU domain, class 2, transcription factor 1 [Sus scrofa]
gi|8134598|sp|Q29076.1|PO2F1_PIG RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|703243|gb|AAA93523.1| octamer binding protein 1 [Sus scrofa]
Length = 745
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/173 (45%), Positives = 107/173 (61%), Gaps = 20/173 (11%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD--APSVLPA--------GEKKRKRT 332
+L LS NM LKP+L+ WL +AE N D +PS L + +++KRT
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAE----NLSSDSALCSPSALNSPGLGVEGLNRRRKKRT 386
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
SI + +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 387 SIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 439
>gi|426242962|ref|XP_004015337.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 2
[Ovis aries]
Length = 450
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 165 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 221
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 222 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 280
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 327
>gi|403305390|ref|XP_003943250.1| PREDICTED: POU domain, class 2, transcription factor 2 [Saimiri
boliviensis boliviensis]
Length = 474
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 176 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 232
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 233 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 291
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 292 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 350
>gi|119577503|gb|EAW57099.1| POU domain, class 2, transcription factor 2, isoform CRA_b [Homo
sapiens]
gi|119577508|gb|EAW57104.1| POU domain, class 2, transcription factor 2, isoform CRA_b [Homo
sapiens]
gi|119577509|gb|EAW57105.1| POU domain, class 2, transcription factor 2, isoform CRA_b [Homo
sapiens]
Length = 460
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 134/264 (50%), Gaps = 37/264 (14%)
Query: 133 HHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNS 192
HH+ P+ L PQ + GL PTPN QL + +
Sbjct: 118 HHLQPPAQFLLPQ-AQQSQPGLL-----------------PTPNLFQLPQQTQGALLTSQ 159
Query: 193 MMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRI 249
G LP H HP P L+ HP+ +D ELE FA FKQRRI
Sbjct: 160 PRAGLPTQAVTRPTLPDPH----LSHPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRI 215
Query: 250 KLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA 309
KLG TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 216 KLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMS 272
Query: 310 KNKRR-DPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 361
+ P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I IA
Sbjct: 273 VDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIA 331
Query: 362 EKLDLKKNVVRVWFCNQRQKQKRM 385
E+L ++K V+RVWFCN+RQK+KR+
Sbjct: 332 EQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|403310682|ref|NP_001258133.1| POU domain, class 2, transcription factor 2 [Rattus norvegicus]
Length = 458
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|297670610|ref|XP_002813456.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Pongo abelii]
Length = 317
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 149 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 205
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 206 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 257
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 258 HFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|53492|emb|CAA41009.1| Oct2.6 transcription factor [Mus musculus]
Length = 424
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 138 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 194
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 195 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 253
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 254 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 300
>gi|426242968|ref|XP_004015340.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 5
[Ovis aries]
Length = 483
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 198 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 254
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 255 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 313
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 314 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 360
>gi|374087711|gb|AEY82654.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087747|gb|AEY82672.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 147/289 (50%), Gaps = 41/289 (14%)
Query: 125 SGALPASHHHVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMTTLTPMSDPTPNPH 178
SG + A H+ + PS Q S +G M G+ EML + S L S PNP+
Sbjct: 34 SGNVSAGLHY-SVPSCHYGNQASTYGVMAGIKPATPEMLSASLSQSRILQTCS--MPNPN 90
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP---------------- 222
++ S S+ + H + + H H ++
Sbjct: 91 VVNGVSTLQSSLTPCLYKFPEHALSASSCALGHSFTPMHQTLLSDDPTASDFKQEFRRKS 150
Query: 223 PGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICR
Sbjct: 151 KSVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICR 207
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAP 337
FE+L LS N LK IL WLEEAE N++ + E+KRKR T+I+
Sbjct: 208 FENLQLSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIS 259
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 260 AKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|402905716|ref|XP_003915660.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Papio anubis]
Length = 400
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 165 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 221
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 222 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 280
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|374087701|gb|AEY82649.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087735|gb|AEY82666.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 147/289 (50%), Gaps = 41/289 (14%)
Query: 125 SGALPASHHHVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMTTLTPMSDPTPNPH 178
SG + A H+ + PS Q S +G M G+ EML + S L S PNP+
Sbjct: 34 SGKVSAGLHY-SVPSCHYGNQASTYGVMAGIKPATPEMLSASLSQSRILQTCS--MPNPN 90
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP---------------- 222
++ S S+ + H + + H H ++
Sbjct: 91 VVNGVSTLQSSLTPCLYKFPEHALSASSCALGHSFTPMHQTLLSDDPTASDFKQEFRRKS 150
Query: 223 PGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICR
Sbjct: 151 KSVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICR 207
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAP 337
FE+L LS N LK IL WLEEAE N++ + E+KRKR T+I+
Sbjct: 208 FENLQLSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIS 259
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 260 AKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|53488|emb|CAA41007.1| Oct2.4 transcription factor [Mus musculus]
Length = 400
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 165 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 221
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 222 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 280
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|281306783|ref|NP_001094109.1| POU domain, class 2, transcription factor 1 [Rattus norvegicus]
gi|149058150|gb|EDM09307.1| POU domain, class 2, transcription factor 1, isoform CRA_c [Rattus
norvegicus]
Length = 768
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 300 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 353
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 354 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 413
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 414 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 462
>gi|345784983|ref|XP_866292.2| PREDICTED: POU domain, class 2, transcription factor 2 isoform 7
[Canis lupus familiaris]
Length = 413
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 107/179 (59%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 178 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 234
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 235 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 293
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 294 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 352
>gi|313215124|emb|CBY42831.1| unnamed protein product [Oikopleura dioica]
Length = 426
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 111/223 (49%), Gaps = 28/223 (12%)
Query: 184 SMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL------QHPDTDTDPREL 237
S Y M++ H + H++ S H L Q P TD +L
Sbjct: 188 SWYASQMSAAGVAAHPYSHYTNPYTGSALGAGLHDSFAAQNLFSLGDDQQPSTD----DL 243
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
E FA FKQ+RIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+
Sbjct: 244 ERFARDFKQKRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPL 300
Query: 298 LQAWLEEAE-AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
L WL+EA+ A D + G K++KRTSI K +LE F QP+PS +
Sbjct: 301 LSRWLDEADSATGGMPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAE 360
Query: 357 IAAIAEKLDLKKNVVRVWFCNQ--------------RQKQKRM 385
I AE L L+K VVRVWFCN+ RQK KR+
Sbjct: 361 ITNTAESLQLEKEVVRVWFCNRYYLFKIIFSIIKKMRQKAKRL 403
>gi|149754664|ref|XP_001490158.1| PREDICTED: POU domain, class 5, transcription factor 1-like [Equus
caballus]
Length = 360
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPVM-PPGL 225
P P P++ Y GP + + +GA S+ GA+ P PPG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGSLETSQPEGEAGARVESNSEGASPEPCAAPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D ++LE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKVDKEKLEQNPEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAENLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIETRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|395821288|ref|XP_003783977.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Otolemur garnettii]
Length = 317
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 143/287 (49%), Gaps = 36/287 (12%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQL 180
HH + LP S+H S +L + L L S + T + P+ H
Sbjct: 28 HHSAAECLPVSNHATNVMSTVLSILSLIQTLKCLRTLSSAKTLGNAATGLHYSVPSCHYG 87
Query: 181 HSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG---------------- 224
+ S YG + + H+ H H P++
Sbjct: 88 NQPSTYGVMAGGLTPCLYKFPDHT----LGHGFPPIHQPLLAEDPTAAEFKQELRRKSKL 143
Query: 225 LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE
Sbjct: 144 VEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFE 200
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEK 339
+L LS N LK IL WL+EAE N++ + A E+KRKR T+I+ K
Sbjct: 201 NLQLSFKNACKLKAILSKWLDEAEQVGALYNEK--------VGANERKRKRRTTISIAAK 252
Query: 340 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 253 DALERHFGEQNKPSSQEIVRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|297661206|ref|XP_002809144.1| PREDICTED: POU domain, class 5, transcription factor 1-like [Pongo
abelii]
Length = 360
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P +PPG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGSLETSQPEGEAGVGVESNSDGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|74199437|dbj|BAE34453.1| unnamed protein product [Mus musculus]
Length = 329
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 97/153 (63%), Gaps = 7/153 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D +T ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 183 HSDEETPTSDELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 239
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + G K++KRTSI K LE +
Sbjct: 240 LSFKNMCKLKPLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETH 296
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQ 378
F P+P+ ++I+++A+ L L+K VVRVWFCN+
Sbjct: 297 FLKCPKPAAQEISSLADSLQLEKEVVRVWFCNR 329
>gi|397481162|ref|XP_003811824.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Pan paniscus]
Length = 400
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 165 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 221
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 222 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 280
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|114431254|ref|NP_945150.2| POU domain, class 2, transcription factor 1 isoform Z [Mus
musculus]
Length = 769
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 301 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 354
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 355 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 414
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 415 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 463
>gi|88174213|gb|ABD39233.1| pituitary transcription factor 1 beta variant [Ovis aries]
Length = 317
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 149 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 205
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 206 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 257
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 258 HFGEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|47522900|ref|NP_999205.1| POU domain, class 2, transcription factor 2 [Sus scrofa]
gi|3024236|sp|Q29013.1|PO2F2_PIG RecName: Full=POU domain, class 2, transcription factor 2; AltName:
Full=Lymphoid-restricted immunoglobulin octamer-binding
protein NF-A2; AltName: Full=Octamer-binding protein 2;
Short=Oct-2; AltName: Full=Octamer-binding transcription
factor 2; Short=OTF-2
gi|451314|gb|AAA80148.1| POU-domain protein [Sus scrofa]
Length = 478
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 110/179 (61%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEASDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPDA---PSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSRPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>gi|21070381|gb|AAM34281.1|AF508939_1 POU domain transcription factor Oct-1B [Mus musculus]
gi|148707262|gb|EDL39209.1| POU domain, class 2, transcription factor 1, isoform CRA_b [Mus
musculus]
Length = 746
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 278 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 331
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 332 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 391
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 392 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>gi|224044259|ref|XP_002194871.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Taeniopygia guttata]
Length = 335
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/302 (35%), Positives = 148/302 (49%), Gaps = 49/302 (16%)
Query: 121 HHHHSGALPASHH---------HVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMT 165
HH + L S+H H + PS Q S +G M G+ EML + S
Sbjct: 28 HHSAAECLQVSNHTTNVVSTGLHYSVPSCHYGNQPSTYGVMTGIKPATPEMLSASLSQTR 87
Query: 166 TLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVM---- 221
L S P PN ++ S + + H +G+ H A P++
Sbjct: 88 ILQTCSMPHPNV--VNGVSTLQSGLTPCLYKFPEHALSAGSCALGHGFTALPQPLLTDEP 145
Query: 222 -------------PPGLQHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKL 267
P + D D+ + RELE FA FK RRIKLG TQ +VG+ALA +
Sbjct: 146 TATDFKQEFRRKSKPVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH- 204
Query: 268 PGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAG 325
SQ+TICRFE+L LS N LK IL WLEEAE N++ +
Sbjct: 205 --GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVN 254
Query: 326 EKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR
Sbjct: 255 ERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKR 314
Query: 385 MK 386
+K
Sbjct: 315 VK 316
>gi|53472|emb|CAA48423.1| Oct-1B protein [Mus musculus]
Length = 746
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 278 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 331
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 332 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 391
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 392 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>gi|114431256|ref|NP_945151.2| POU domain, class 2, transcription factor 1 isoform L [Mus
musculus]
gi|148707266|gb|EDL39213.1| POU domain, class 2, transcription factor 1, isoform CRA_f [Mus
musculus]
Length = 758
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 290 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 343
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 344 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 403
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 404 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 452
>gi|119577502|gb|EAW57098.1| POU domain, class 2, transcription factor 2, isoform CRA_a [Homo
sapiens]
Length = 466
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 199 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 255
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 256 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 314
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 315 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 361
>gi|45383514|ref|NP_989650.1| pituitary-specific positive transcription factor 1 [Gallus gallus]
gi|4103930|gb|AAD01888.1| transcription factor Pit-1/GHF-1 [Gallus gallus]
gi|4456146|emb|CAA10947.2| pituitary specific transcription factor [Gallus gallus]
Length = 327
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 104/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 158 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 214
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 215 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALER 266
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 267 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|301604325|ref|XP_002931807.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 3 [Xenopus (Silurana) tropicalis]
Length = 330
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 161 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 217
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + E+KRKR T+I+ K +LE+
Sbjct: 218 FKNACKLKSILSKWLDEAEQVGALYNEK--------IGGNERKRKRRTTISIAAKEALES 269
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 270 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 311
>gi|27807047|ref|NP_777004.1| pituitary-specific positive transcription factor 1 [Bos taurus]
gi|123407|sp|P10036.1|PIT1_BOVIN RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|389|emb|CAA31184.1| unnamed protein product [Bos taurus]
Length = 291
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 147/280 (52%), Gaps = 40/280 (14%)
Query: 128 LPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
+P + AT L++ P + L + + ++ M+T T + P H + SS YG
Sbjct: 13 IPLNSESSATLPLIMHPS----AAECLPVSNHATNVMSTATGLHYSVPFCHYGNQSSTYG 68
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP-DT 230
S+ + H+ SH H P++ ++ P D
Sbjct: 69 VMAGSLTPCLYKFPDHT----LSHGFPPMHQPLLSEDPTAADFKQELRRKSKLVEEPIDM 124
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 125 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 181
Query: 290 NMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE +F
Sbjct: 182 NACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|301772654|ref|XP_002921746.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Ailuropoda melanoleuca]
gi|281339010|gb|EFB14594.1| hypothetical protein PANDA_010657 [Ailuropoda melanoleuca]
Length = 317
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 146/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LP S+H PS+L Q L S+ + T T + P+
Sbjct: 28 HHSAAECLPVSNHATNVMSTVPSILSLIQTP----KCLRAYFSVPTLGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG S+ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGSLTPCLYKFPDHT----LSHGFPPMHQPLLAEDPTVTDFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|148692345|gb|EDL24292.1| POU domain, class 2, transcription factor 2, isoform CRA_c [Mus
musculus]
Length = 435
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 107/179 (59%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 165 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 221
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 222 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 280
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 281 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|301604323|ref|XP_002931806.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 323
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 154 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 210
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + E+KRKR T+I+ K +LE+
Sbjct: 211 FKNACKLKSILSKWLDEAEQVGALYNEK--------IGGNERKRKRRTTISIAAKEALES 262
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 263 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 304
>gi|351713884|gb|EHB16803.1| Pituitary-specific positive transcription factor 1 [Heterocephalus
glaber]
Length = 317
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 104/163 (63%), Gaps = 17/163 (10%)
Query: 230 TDTDP---RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
TD D RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L L
Sbjct: 148 TDMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQL 204
Query: 287 SHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLE 343
S N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 205 SFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALE 256
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 257 RNFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|348515651|ref|XP_003445353.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Oreochromis niloticus]
Length = 374
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 142/290 (48%), Gaps = 51/290 (17%)
Query: 129 PASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGP 188
PAS H+ TP Q ++ M EML + S L P+P+ + ++
Sbjct: 76 PASLHYPVTPCHYTNQQATYGMMAAQEMLSASISQTRILQTCG--VPHPNMVSGANALQG 133
Query: 189 SMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPD-----------------TD 231
S+ S + H SG+ SH + +PP L D +
Sbjct: 134 SLTSCLYKFPDHGLSSGSCALSHGFSS-----LPPALLSTDEAPGGPSGEIKSDGQRKSM 188
Query: 232 TDP-----------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
DP RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICR
Sbjct: 189 RDPEDAPAMDSPQIRELEMFANDFKIRRIKLGYTQTNVGEALAAVH---GSEFSQTTICR 245
Query: 281 FESLTLSHNNMIALKPILQAWLEEAE---AQAKNKRRDPDAPSVLPAGEKKRK-RTSIAA 336
FE+L LS N LK IL WL+EAE A +K + E+KRK RT+I+
Sbjct: 246 FENLQLSFKNACKLKAILAKWLDEAELAGALYNDK---------IGMNERKRKRRTTISL 296
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE F + +PS ++IA IA+ L L+K VVRVWFCN+RQ++KR+K
Sbjct: 297 GAKEALERSFVEKSKPSSQEIARIAKGLHLEKEVVRVWFCNRRQREKRVK 346
>gi|313245330|emb|CBY40092.1| unnamed protein product [Oikopleura dioica]
Length = 485
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/223 (40%), Positives = 111/223 (49%), Gaps = 28/223 (12%)
Query: 184 SMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL------QHPDTDTDPREL 237
S Y M++ H + H++ S H L Q P TD +L
Sbjct: 247 SWYASQMSAAGVAAHPYSHYTNPYTGSALGAGLHDSFAAQNLFSLGDDQQPSTD----DL 302
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
E FA FKQ+RIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+
Sbjct: 303 ERFARDFKQKRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPL 359
Query: 298 LQAWLEEAE-AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
L WL+EA+ A D + G K++KRTSI K +LE F QP+PS +
Sbjct: 360 LSRWLDEADSATGGMPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAE 419
Query: 357 IAAIAEKLDLKKNVVRVWFCNQ--------------RQKQKRM 385
I AE L L+K VVRVWFCN+ RQK KR+
Sbjct: 420 ITNTAESLQLEKEVVRVWFCNRYYLFKILFSIIKKMRQKAKRL 462
>gi|426242964|ref|XP_004015338.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Ovis aries]
Length = 388
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 153 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 209
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 210 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 268
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 269 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 327
>gi|410910758|ref|XP_003968857.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Takifugu rubripes]
Length = 435
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 14/163 (8%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 230 SDLEELEQFARTFKQRRIKLGFTQGDVGVAMG--KLYG-NDFSQTTISRFEALNLSFKNM 286
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSV---------LPAGEKKRKRTSIAAPEKRSL 342
LKP+L+ WL +AE A + P S+ LP G++++KRTSI + L
Sbjct: 287 CKLKPLLEKWLSDAETMAVDSML-PSPSSISNPMSGFEGLP-GKRRKKRTSIETNVRVVL 344
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E F +P+ E+I +AE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 345 ERNFNTNQKPTSEEILMLAEQLNMEKEVIRVWFCNRRQKEKRI 387
>gi|403273108|ref|XP_003928365.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 291
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 123 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 179
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 180 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 231
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 232 HFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|395831943|ref|XP_003789042.1| PREDICTED: POU domain, class 5, transcription factor 1 [Otolemur
garnettii]
Length = 359
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 126/232 (54%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPVMPPG-- 224
P P P++ Y GP + + +GA S+ GA+ P P
Sbjct: 62 PCPPPYEFCGGVAYCGPQVGVGLVPQGSLETSKPESEAGAGVESNSEGASPEPCTAPSGA 121
Query: 225 -------LQHP----DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-A 272
Q P D T +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKMEEKLEQSPEESQDIKTLQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKV 177
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 178 FSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKRT 234
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 SIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|40254792|ref|NP_037140.2| pituitary-specific positive transcription factor 1 [Rattus
norvegicus]
gi|38181558|gb|AAH61563.1| POU class 1 homeobox 1 [Rattus norvegicus]
Length = 291
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 141/263 (53%), Gaps = 36/263 (13%)
Query: 145 QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS 204
+M H+ +GL + ++ M+T T + P+ H + S YG ++ + H+
Sbjct: 26 RMHHNAAEGLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGTLTPCLYKFPDHT 85
Query: 205 GALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQ 246
SH H P++ ++ P D D+ + RELE FA FK
Sbjct: 86 ----LSHGFPPLHQPLLAEDPTASEFKQELRRKSKLVEEPIDMDSPEIRELEQFANEFKV 141
Query: 247 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 306
RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 142 RRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE 198
Query: 307 AQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 363
N++ + A E+KRKR T+I+ K +LE +F +PS ++I +AE+
Sbjct: 199 QVGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEE 250
Query: 364 LDLKKNVVRVWFCNQRQKQKRMK 386
L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 251 LNLEKEVVRVWFCNRRQREKRVK 273
>gi|440906197|gb|ELR56490.1| Pituitary-specific positive transcription factor 1 [Bos grunniens
mutus]
Length = 348
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 180 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 236
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 237 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 288
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 289 HFGEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 330
>gi|13445249|emb|CAC34943.1| Oct-1L [Mus musculus]
Length = 758
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 290 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 343
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 344 ALNLSFKNMCKLKPLLEKWLNDAENLSSGSTASSPSALNSPGLGAEGLNRRRKKRTSIET 403
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 404 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 452
>gi|291397484|ref|XP_002715817.1| PREDICTED: POU class 2 homeobox 1 [Oryctolagus cuniculus]
Length = 745
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE A + + V +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGQGVEGLNRRRKKRTSIET 390
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I+ IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 NIRVALEKSFLENQKPTSEEISMIAEQLNMEKEVIRVWFCNRRQKEKRI 439
>gi|1450388|gb|AAB04691.1| Pit-1* [Meleagris gallopavo]
Length = 342
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 149/307 (48%), Gaps = 52/307 (16%)
Query: 121 HHHHSGALPASHH---------HVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMT 165
HH + LP S+H H + PS Q S +G M G+ EML + S
Sbjct: 28 HHSAAECLPVSNHATSVVSTGLHYSVPSCHYGNQTSTYGVMTGIKPATPEMLSASLSQSR 87
Query: 166 TLTPMSDPTPNP----HQLHSSSM-YGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPV 220
L S P PN L S S + S+ + H + + H H +
Sbjct: 88 ILQTCSMPHPNVVNGVSTLQSKSFSFSCSLTPCLYKFPEHALSASSCALGHSFTPMHQTL 147
Query: 221 MP----------------PGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKAL 262
+ ++ P D D+ + RELE FA FK RRIKLG TQ +VG+AL
Sbjct: 148 LSDDPTAADFKQEFRRKSKSVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEAL 207
Query: 263 ANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPS 320
A + SQ+TICRFE+ LS N LK IL WLEEAE N++
Sbjct: 208 AAVH---GSEFSQTTICRFENSQLSFKNACKLKSILSKWLEEAEQVGALYNEK------- 257
Query: 321 VLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQR 379
+ E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+R
Sbjct: 258 -VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRR 316
Query: 380 QKQKRMK 386
Q++KR+K
Sbjct: 317 QREKRVK 323
>gi|354480277|ref|XP_003502334.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Cricetulus griseus]
Length = 757
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 451
>gi|301604321|ref|XP_002931805.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 357
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 188 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 244
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + E+KRKR T+I+ K +LE+
Sbjct: 245 FKNACKLKSILSKWLDEAEQVGALYNEK--------IGGNERKRKRRTTISIAAKEALES 296
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 297 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 338
>gi|301604327|ref|XP_002931808.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 4 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 127 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 183
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + E+KRKR T+I+ K +LE+
Sbjct: 184 FKNACKLKSILSKWLDEAEQVGALYNEK--------IGGNERKRKRRTTISIAAKEALES 235
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 236 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 277
>gi|326674726|ref|XP_003200194.1| PREDICTED: POU domain, class 2, transcription factor 2-like [Danio
rerio]
Length = 632
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 192 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNL 248
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + + LP G +++KRTSI
Sbjct: 249 SFKNMCKLKPLLEKWLTDAETMSMDSTLPSPSSLSSPSLGFEGLP-GRRRKKRTSIETNV 307
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I I+EKL+++K V+RVWFCN+RQK+KR+
Sbjct: 308 RVALEHSFLANQKPTSEEILLISEKLNMEKEVIRVWFCNRRQKEKRI 354
>gi|345495457|ref|XP_001602856.2| PREDICTED: protein nubbin-like [Nasonia vitripennis]
Length = 516
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 289 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 345
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P++ P P G +++KRTSI + +LE F P+P+
Sbjct: 346 KWLEDAD----NSLNNPNSLSNPMTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTS 401
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 402 EEITILADSLAMEKEVVRVWFCNRRQKEKRI 432
>gi|28202253|sp|P31503.2|PO2F1_RAT RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|575455|gb|AAA53185.1| Oct1, partial [Rattus norvegicus]
Length = 632
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 164 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 217
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 218 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 277
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 278 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 326
>gi|334191630|gb|AEG66930.1| POU domian transcription factor Polynem [Hydractinia echinata]
Length = 426
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 99/150 (66%), Gaps = 5/150 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA+ FK++RIKLG TQ+DVG L +L SQ+TICRFE+L LS NM L+
Sbjct: 227 DLEAFAKEFKRKRIKLGFTQSDVGLGLGSLY---GNIFSQTTICRFEALQLSFKNMCKLQ 283
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WL+E + + + ++ PA K++KRTSI K +LE YF +PSG
Sbjct: 284 PLLVKWLDEMDNNFLGTE-NATSRNLFPA-RKRKKRTSIDLTLKETLEMYFIKHQKPSGH 341
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I IA +L+L+K VVRVWFCN+RQK+KR+
Sbjct: 342 DITEIAMQLNLEKEVVRVWFCNRRQKEKRL 371
>gi|313231435|emb|CBY08549.1| unnamed protein product [Oikopleura dioica]
Length = 337
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 105/202 (51%), Gaps = 14/202 (6%)
Query: 184 SMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL------QHPDTDTDPREL 237
S Y M++ H + H++ S H L Q P TD +L
Sbjct: 143 SWYASQMSAAGVAAHPYSHYTNPYTGSALGAGLHDSFAAQNLFSLGDDQQPSTD----DL 198
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
E FA FKQ+RIKLG TQADVG AL L SQ+TICRFE+L LS NM LKP+
Sbjct: 199 ERFARDFKQKRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPL 255
Query: 298 LQAWLEEAE-AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
L WL+EA+ A D + G K++KRTSI K +LE F QP+PS +
Sbjct: 256 LSRWLDEADSATGGMPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAE 315
Query: 357 IAAIAEKLDLKKNVVRVWFCNQ 378
I AE L L+K VVRVWFCN+
Sbjct: 316 ITNTAESLQLEKEVVRVWFCNR 337
>gi|383847571|ref|XP_003699426.1| PREDICTED: uncharacterized protein LOC100875025 [Megachile
rotundata]
Length = 516
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 297 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 353
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P++ P P G +++KRTSI + +LE F P+P+
Sbjct: 354 KWLEDAD----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFMQNPKPTS 409
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 410 EEITVLADSLAMEKEVVRVWFCNRRQKEKRI 440
>gi|403308461|ref|XP_003944679.1| PREDICTED: POU domain, class 5, transcription factor 1 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +GA S+ G + P +PPG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGAGVESNSEGPSPEPCTIPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|402866391|ref|XP_003897368.1| PREDICTED: POU domain, class 5, transcription factor 1 [Papio
anubis]
gi|217035847|gb|ACJ74396.1| POU class 5 homeobox 1 [Macaca mulatta]
Length = 360
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +GA S+ GA+ P +P G
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGAGVESNSDGASPEPCTVPTGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + SLE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|348565865|ref|XP_003468723.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Cavia
porcellus]
Length = 745
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + V +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSVSSPSALNSPGQGVEGLNRRRKKRTSIET 390
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 NIRAALEKSFLENQKPTSEEITLIAEQLNMEKEVIRVWFCNRRQKEKRI 439
>gi|119577510|gb|EAW57106.1| POU domain, class 2, transcription factor 2, isoform CRA_g [Homo
sapiens]
Length = 454
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 187 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 243
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 244 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 302
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 303 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 349
>gi|374087715|gb|AEY82656.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087719|gb|AEY82658.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 104/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 158 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 214
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 215 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALER 266
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 267 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|374087697|gb|AEY82647.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 104/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 158 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 214
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 215 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALER 266
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 267 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|344252692|gb|EGW08796.1| hypothetical protein I79_008847 [Cricetulus griseus]
Length = 621
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 168 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 221
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 222 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 281
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 282 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 330
>gi|296231876|ref|XP_002761338.1| PREDICTED: pituitary-specific positive transcription factor 1
[Callithrix jacchus]
Length = 291
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 123 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 179
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 180 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 231
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 232 HFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|354501599|ref|XP_003512878.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Cricetulus griseus]
Length = 291
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 103/160 (64%), Gaps = 11/160 (6%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 123 DMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 179
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE + A E+KRKR T+I+ K +LE +F
Sbjct: 180 FKNACKLKAILSKWLEEAEQVGALYSEK------VGANERKRKRRTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GQQSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|119577504|gb|EAW57100.1| POU domain, class 2, transcription factor 2, isoform CRA_c [Homo
sapiens]
Length = 444
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|148692344|gb|EDL24291.1| POU domain, class 2, transcription factor 2, isoform CRA_b [Mus
musculus]
Length = 396
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 126 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 182
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 183 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 241
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 242 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 300
>gi|113927882|dbj|BAF30835.1| octamer-binding transcription factor-3B [Macaca fascicularis]
Length = 265
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 108/166 (65%), Gaps = 8/166 (4%)
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTI 278
++P +Q D +ELE FA+ KQ+RI LG TQADVG L L G SQ+TI
Sbjct: 34 LLPFKIQSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKVFSQTTI 89
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
CRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRTSI
Sbjct: 90 CRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKRTSIENRV 146
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
+ SLE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 147 RGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 192
>gi|169234976|ref|NP_001108427.1| POU domain, class 5, transcription factor 1 [Macaca mulatta]
gi|62510911|sp|Q5TM49.1|PO5F1_MACMU RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding protein 4; Short=Oct-4; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|55700790|dbj|BAD69745.1| transcription factor 1 [Macaca mulatta]
Length = 360
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +GA S+ GA+ P +P G
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGAGVESNSDGASPEPCTVPTGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + SLE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|113927880|dbj|BAF30834.1| octamer-binding transcription factor-3A [Macaca fascicularis]
gi|115500954|dbj|BAF34147.1| POU domain class 5 transcription factor 1 [Macaca fascicularis]
gi|355561517|gb|EHH18149.1| Octamer-binding transcription factor 3 [Macaca mulatta]
Length = 360
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +GA S+ GA+ P +P G
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGAGVESNSDGASPEPCTVPTGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + SLE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|119577507|gb|EAW57103.1| POU domain, class 2, transcription factor 2, isoform CRA_f [Homo
sapiens]
Length = 405
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 109/179 (60%), Gaps = 16/179 (8%)
Query: 219 PVMPPGL----QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
P PP HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 126 PTQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 182
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 183 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 241
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 242 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 300
>gi|55741453|ref|NP_001006950.1| pituitary-specific positive transcription factor 1 [Canis lupus
familiaris]
gi|13431779|sp|Q9TTI7.1|PIT1_CANFA RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|6649946|gb|AAF21643.1|AF035585_1 transcription factor Pit-1 [Canis lupus familiaris]
Length = 291
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
DT++ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 123 DTESPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 179
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 180 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 231
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 232 HFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|432930943|ref|XP_004081537.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Oryzias latipes]
Length = 661
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 109/174 (62%), Gaps = 18/174 (10%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 199 PTLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 252
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP--DAPSVLPA--------GEKKRKRT 332
+L LS NM LKP+L+ WL +A A+N D +PS L + +++KRT
Sbjct: 253 ALNLSFKNMCKLKPLLEKWLNDAVC-AENLTSDQALSSPSALGSPGMGMEGINRRRKKRT 311
Query: 333 SIAAPEKRSLEAYFAVQ-PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
SI + +LE F Q +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 312 SIETNIRVALEKSFVEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 365
>gi|536781|emb|CAA56934.1| Oct-2 [Mus musculus]
Length = 210
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 14 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 70
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 71 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 129
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 130 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 188
>gi|357618068|gb|EHJ71163.1| nubbin [Danaus plexippus]
Length = 458
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 105/166 (63%), Gaps = 5/166 (3%)
Query: 222 PPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRF 281
P L D D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RF
Sbjct: 221 PRALDPADDTADLEELEHFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRF 277
Query: 282 ESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVL--PAGEKKRKRTSIAAPEK 339
E+L LS NM LKP+LQ WLE+A++ + L G +++KRTSI + +
Sbjct: 278 EALNLSFKNMCKLKPLLQKWLEDADSSLSGSGGGASLGAGLAEAVGRRRKKRTSIESGVR 337
Query: 340 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+LE F P+P+ E+I+A+A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 338 VALEKAFLHNPKPTSEEISALADSLCMEKEVVRVWFCNRRQKEKRI 383
>gi|351696239|gb|EHA99157.1| POU domain, class 2, transcription factor 1, partial
[Heterocephalus glaber]
Length = 750
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 282 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 335
Query: 283 SLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + V +++KRTSI
Sbjct: 336 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSVSSPSALNSPGQGVEGLNRRRKKRTSIET 395
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 396 NIRAALEKSFLENQKPTSEEITLIAEQLNMEKEVIRVWFCNRRQKEKRI 444
>gi|149058149|gb|EDM09306.1| POU domain, class 2, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
Length = 723
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 300 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 353
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 354 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 413
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 414 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 462
>gi|307174898|gb|EFN65159.1| POU domain, class 2, transcription factor 1 [Camponotus floridanus]
Length = 512
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 293 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 349
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLP--AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P++ P P G +++KRTSI + +LE F P+P+
Sbjct: 350 KWLEDAD----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFIQNPKPTS 405
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 406 EEITILADSLAMEKEVVRVWFCNRRQKEKRI 436
>gi|53494|emb|CAA40369.1| Oct-2B protein [Mus musculus]
gi|259165|gb|AAA11815.1| Oct-2B [Mus sp.]
Length = 300
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 2 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 58
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 59 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 117
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 118 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 176
>gi|38181828|gb|AAH61564.1| Pou1f1 protein [Rattus norvegicus]
Length = 336
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LPAS+H PS+L Q L S+++ T T + P+
Sbjct: 47 HHSAAEGLPASNHATNVMSTVPSILSLIQTP----KCLHTYFSMTTMGNTATGLHYSVPS 102
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG ++ + H+ SH H P++
Sbjct: 103 CHYGNQPSTYGVMAGTLTPCLYKFPDHT----LSHGFPPLHQPLLAEDPTASEFKQELRR 158
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 159 KSKLVEEPIDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 215
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 216 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 267
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 268 IAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 318
>gi|4379032|emb|CAA56933.1| Oct-2 [Homo sapiens]
Length = 210
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/179 (46%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G S
Sbjct: 14 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFS 70
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 71 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 129
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 130 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 188
>gi|30179807|sp|P25425.3|PO2F1_MOUSE RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|148707265|gb|EDL39212.1| POU domain, class 2, transcription factor 1, isoform CRA_e [Mus
musculus]
Length = 770
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 278 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 331
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 332 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 391
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 392 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>gi|53466|emb|CAA48422.1| Oct-1A protein [Mus musculus]
Length = 770
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 278 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 331
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 332 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 391
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 392 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>gi|410896694|ref|XP_003961834.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Takifugu rubripes]
Length = 661
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 110/174 (63%), Gaps = 18/174 (10%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 204 PTLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 257
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP--DAPSVLPA--------GEKKRKRT 332
+L LS NM LKP+L+ WL +A A+N D +PS L + +++KRT
Sbjct: 258 ALNLSFKNMCKLKPLLEKWLNDAGC-AENLTSDQALSSPSALGSPGMGIEGINRRRKKRT 316
Query: 333 SIAAPEKRSLEAYFAVQ-PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
SI + +LE F Q +P+ E+IA IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 317 SIETNIRVALEKSFLEQNQKPTSEEIAMIADQLNMEKEVIRVWFCNRRQKEKRI 370
>gi|403182801|gb|EJY57640.1| AAEL017445-PA [Aedes aegypti]
Length = 502
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 99/154 (64%), Gaps = 11/154 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 305 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 361
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPA--------GEKKRKRTSIAAPEKRSLEAYFAVQPR 351
WLE+A++ N +PS + + G +++KRTSI + +LE F V +
Sbjct: 362 KWLEDADSSISNPGGRIFSPSTIASTTPTPEMVGRRRKKRTSIETSVRVALEKAFLVNSK 421
Query: 352 PSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+ E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 422 PTSEEITNLADNLCMEKEVVRVWFCNRRQKEKRI 455
>gi|114431252|ref|NP_035267.2| POU domain, class 2, transcription factor 1 isoform A [Mus
musculus]
gi|26390039|dbj|BAC25832.1| unnamed protein product [Mus musculus]
Length = 793
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 301 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 354
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 355 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 414
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 415 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 463
>gi|114431258|ref|NP_945152.2| POU domain, class 2, transcription factor 1 isoform B [Mus
musculus]
gi|148922517|gb|AAI46306.1| POU domain, class 2, transcription factor 1 [synthetic construct]
gi|151555541|gb|AAI48749.1| POU domain, class 2, transcription factor 1 [synthetic construct]
Length = 782
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 290 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 343
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 344 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 403
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 404 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 452
>gi|74221030|dbj|BAE33673.1| unnamed protein product [Mus musculus]
Length = 483
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|218963105|gb|ACJ13295.2| pituitary-specific transcription factor 1 [Anser anser]
Length = 336
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 101/160 (63%), Gaps = 11/160 (6%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 167 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 223
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE + E+KRKR T+I+ K +LE +F
Sbjct: 224 FKNACKLKSILSKWLEEAEQVGALYSEK------VGVNERKRKRRTTISIAAKEALERHF 277
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 278 GEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 317
>gi|6679335|ref|NP_032875.1| pituitary-specific positive transcription factor 1 [Mus musculus]
gi|123409|sp|Q00286.1|PIT1_MOUSE RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|53691|emb|CAA40737.1| pit-1 [Mus musculus]
gi|493686|dbj|BAA02289.1| pit-1/GHF-1 [Mus musculus]
gi|38174668|gb|AAH61213.1| Pou1f1 protein [Mus musculus]
gi|148665828|gb|EDK98244.1| pituitary specific transcription factor 1 [Mus musculus]
gi|227214|prf||1616365A pit-1 gene
Length = 291
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/283 (36%), Positives = 144/283 (50%), Gaps = 50/283 (17%)
Query: 125 SGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSS 184
S ALP HH A L P +H ++ M+T T + P+ H + S
Sbjct: 20 SAALPLRMHHSAAECL---PASNH-----------ATNVMSTATGLHYSVPSCHYGNQPS 65
Query: 185 MYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP 228
YG S+ + H+ SH H P++ ++ P
Sbjct: 66 TYGVMAGSLTPCLYKFPDHT----LSHGFPPLHQPLLAEDPAASEFKQELRRKSKLVEEP 121
Query: 229 -DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L L
Sbjct: 122 IDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQL 178
Query: 287 SHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLE 343
S N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 179 SFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISVAAKDALE 230
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 231 RHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|395821286|ref|XP_003783976.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Otolemur garnettii]
Length = 291
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 123 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 179
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 180 FKNACKLKAILSKWLDEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 231
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 232 HFGEQNKPSSQEIVRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|345322670|ref|XP_001515178.2| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Ornithorhynchus anatinus]
Length = 354
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 185 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 241
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 242 FKNACKLKSILSKWLDEAEQVGALYNEK--------VGANERKRKRRTTISIAAKEALER 293
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +A+ L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 294 HFGEQSKPSSQEIMRMADGLNLEKEVVRVWFCNRRQREKRVK 335
>gi|319401869|ref|NP_001187100.1| Oct2 transcription factor [Ictalurus punctatus]
gi|2058332|emb|CAA73199.1| Oct-2 beta transcription factor [Ictalurus punctatus]
Length = 480
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 105/171 (61%), Gaps = 12/171 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P H + +D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 191 PVTSHAEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 247
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKRTSI 334
+L LS NM LKP+L+ WL +AE + + + LPA +++KRTSI
Sbjct: 248 ALNLSFKNMCKLKPLLEKWLTDAETMSMDSTLPSPSSLSSPSLGFEGLPA-RRRKKRTSI 306
Query: 335 AAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F+ +P+ E+I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 307 ETNVRVALERSFSTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEKRI 357
>gi|13432198|sp|P10037.3|PIT1_RAT RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|56219|emb|CAA31185.1| unnamed protein product [Rattus norvegicus]
gi|206142|gb|AAA41850.1| PIT-1-alpha [Rattus norvegicus]
gi|511883|gb|AAA41854.1| transcription factor [Rattus norvegicus]
gi|149016745|gb|EDL75907.1| POU domain, class 1, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
gi|149016746|gb|EDL75908.1| POU domain, class 1, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
gi|149016747|gb|EDL75909.1| POU domain, class 1, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
Length = 291
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/263 (36%), Positives = 140/263 (53%), Gaps = 36/263 (13%)
Query: 145 QMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS 204
+M H +GL + ++ M+T T + P+ H + S YG ++ + H+
Sbjct: 26 RMHHSAAEGLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGTLTPCLYKFPDHT 85
Query: 205 GALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQ 246
SH H P++ ++ P D D+ + RELE FA FK
Sbjct: 86 ----LSHGFPPLHQPLLAEDPTASEFKQELRRKSKLVEEPIDMDSPEIRELEQFANEFKV 141
Query: 247 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 306
RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 142 RRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE 198
Query: 307 AQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 363
N++ + A E+KRKR T+I+ K +LE +F +PS ++I +AE+
Sbjct: 199 QVGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEE 250
Query: 364 LDLKKNVVRVWFCNQRQKQKRMK 386
L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 251 LNLEKEVVRVWFCNRRQREKRVK 273
>gi|348526410|ref|XP_003450712.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Oreochromis niloticus]
Length = 624
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 12/174 (6%)
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTIC 279
+P HP+ +D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI
Sbjct: 191 TVPSVTSHPEDPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTIS 247
Query: 280 RFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKR 331
RFE+L LS NM LKP+L+ WL +AE + + + +P+ +++KR
Sbjct: 248 RFEALNLSFKNMCKLKPLLEKWLNDAETMSIDSTLPSPSSLSSPSLGFDGVPS-RRRKKR 306
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
TSI + +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 307 TSIETNVRVALERSFMTNQKPTSEEILLIADQLNMEKEVIRVWFCNRRQKEKRI 360
>gi|148707261|gb|EDL39208.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Mus
musculus]
Length = 701
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 278 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 331
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 332 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 391
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 392 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>gi|53474|emb|CAA48424.1| Oct-1C protein [Mus musculus]
Length = 701
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 278 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 331
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 332 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 391
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 392 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>gi|148234823|ref|NP_001081342.1| POU class V protein oct-91 [Xenopus laevis]
gi|214923|gb|AAA49999.1| XOCT-91 [Xenopus laevis]
Length = 445
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/153 (48%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIAL 294
E+E FA+ K +RI +G TQADVG AL L G SQ+TICRFESL LS NM L
Sbjct: 225 EMEQFAKDLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKL 280
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+L++WL E E KN + ++P +K++ RTSI K +LE YF +PS
Sbjct: 281 KPLLRSWLHEVENN-KNLQEIISRGQIIPQVQKRKHRTSIENNVKCTLENYFMQCSKPSA 339
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
++IA IA +L+++K+VVRVWFCN+RQK KR +
Sbjct: 340 QEIAQIARELNMEKDVVRVWFCNRRQKGKRQVY 372
>gi|301772656|ref|XP_002921747.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 291
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 139/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPMHQPLLAEDPTVTDFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGVNERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|270006396|gb|EFA02844.1| nubbin [Tribolium castaneum]
Length = 543
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 100/153 (65%), Gaps = 12/153 (7%)
Query: 238 EAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPI 297
E FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+
Sbjct: 346 EQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPL 402
Query: 298 LQAWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRP 352
LQ WLE+A++ N P A P P G +++KRTSI + +LE F P+P
Sbjct: 403 LQKWLEDADSTLTN----PGALSNPMTTPETIGRRRKKRTSIETSVRVALEKAFVQNPKP 458
Query: 353 SGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ E+I+ +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 459 TSEEISMLADGLCMEKEVVRVWFCNRRQKEKRI 491
>gi|327268793|ref|XP_003219180.1| PREDICTED: pituitary-specific positive transcription factor 1-like
[Anolis carolinensis]
Length = 335
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 102/160 (63%), Gaps = 11/160 (6%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 166 DMDSPEIRELEKFANDFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 222
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE + E+KRKR T+I+ K +LE++F
Sbjct: 223 FKNACKLKSILTKWLEEAEQVGALYSEK------VGVNERKRKRRTTISIAAKEALESHF 276
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 277 TEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 316
>gi|348576527|ref|XP_003474038.1| PREDICTED: POU domain, class 5, transcription factor 1-like [Cavia
porcellus]
Length = 361
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 125/233 (53%), Gaps = 27/233 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGHHHHHH-----HSGALPASHHHGATHHPVMP-PGL 225
P P P++ Y GP + GA S GA+ P PG+
Sbjct: 62 PCPQPYEFCGGVPYCGPQAGVGLAPQGGLEGSPPDGEVGAPVESGSEGASPEPCASHPGV 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D ++LE FA+ KQ+RI LG TQADVG L + G
Sbjct: 122 VKVEKEKPEQNPEESQDINALQKDLEQFAKLLKQKRITLGYTQADVGLTLGAI----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + S+L A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQRWVEEADNNNENLQEKCKTESLLQA--RKRKR 235
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 TSIEDQVRGNLENMFLQCPKPTLQQISRIAQQLGLEKDVVRVWFCNRRQKGKR 288
>gi|145553992|ref|NP_001016337.2| POU domain, class 2, transcription factor 1 [Xenopus (Silurana)
tropicalis]
gi|123907299|sp|Q28BL7.1|PO2F1_XENTR RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=Octamer-binding protein 1; Short=Oct-1; AltName:
Full=Octamer-binding transcription factor 1; Short=OTF-1
gi|89273391|emb|CAJ82126.1| pou domain class 2 transcription factor 1 [Xenopus (Silurana)
tropicalis]
Length = 757
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 105/171 (61%), Gaps = 16/171 (9%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 291 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 344
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA--------GEKKRKRTSI 334
+L LS NM LKP+L+ WL +AE + SVL + +++KRTSI
Sbjct: 345 ALNLSFKNMCKLKPLLEKWLNDAENITSDSSLSNQ--SVLNSPGHGMEGLNRRRKKRTSI 402
Query: 335 AAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 ETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 453
>gi|206145|gb|AAA41852.1| PIT-1-beta [Rattus norvegicus]
gi|4490974|emb|CAA46440.1| GHF-2 [Rattus norvegicus]
gi|149016744|gb|EDL75906.1| POU domain, class 1, transcription factor 1, isoform CRA_a [Rattus
norvegicus]
Length = 317
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LPAS+H PS+L Q L S+++ T T + P+
Sbjct: 28 HHSAAEGLPASNHATNVMSTVPSILSLIQTP----KCLHTYFSMTTMGNTATGLHYSVPS 83
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG ++ + H+ SH H P++
Sbjct: 84 CHYGNQPSTYGVMAGTLTPCLYKFPDHT----LSHGFPPLHQPLLAEDPTASEFKQELRR 139
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 140 KSKLVEEPIDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 196
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 197 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 248
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 249 IAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 299
>gi|149056612|gb|EDM08043.1| POU domain, class 2, transcription factor 2, isoform CRA_a [Rattus
norvegicus]
Length = 469
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 177 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 233
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 234 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 292
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 293 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 339
>gi|374087709|gb|AEY82653.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 14/157 (8%)
Query: 233 DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N
Sbjct: 163 EIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNAC 219
Query: 293 ALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQ 349
LK IL WLEEAE N++ + E+KRKR T+I+ K +LE +F Q
Sbjct: 220 KLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALERHFGEQ 271
Query: 350 PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 272 SKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|340712792|ref|XP_003394939.1| PREDICTED: hypothetical protein LOC100644394 isoform 1 [Bombus
terrestris]
Length = 555
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 336 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 392
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P++ P P G +++KRTSI + +LE F P+P+
Sbjct: 393 KWLEDAD----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTS 448
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 449 EEITVLADTLAMEKEVVRVWFCNRRQKEKRI 479
>gi|156119517|ref|NP_001095255.1| POU domain, class 2, transcription factor 1 [Xenopus laevis]
gi|281185499|sp|P16143.3|PO2F1_XENLA RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=Octamer-binding protein 1; Short=Oct-1;
Short=XOct1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1; AltName: Full=Xloct1-32
gi|64952|emb|CAA40454.1| maternal transcription factor [Xenopus laevis]
Length = 758
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 105/171 (61%), Gaps = 16/171 (9%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 291 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 344
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA--------GEKKRKRTSI 334
+L LS NM LKP+L+ WL +AE + SVL + +++KRTSI
Sbjct: 345 ALNLSFKNMCKLKPLLEKWLNDAENITSDSTLTNQ--SVLNSPGHGMEGLNRRRKKRTSI 402
Query: 335 AAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 ETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 453
>gi|198427417|ref|XP_002130112.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 519
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/160 (46%), Positives = 99/160 (61%), Gaps = 16/160 (10%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA+ FKQ+RIK+G TQ DVG+A+ L SQ+TI RFE+L LS NMI LK
Sbjct: 147 QLELFAKDFKQKRIKMGFTQGDVGQAMGCLY---GNDFSQTTISRFEALNLSFKNMIKLK 203
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSV----------LPAGEKKRKRTSIAAPEKRSLEAY 345
P+L+ WL +A R D SV + K++KRTSI A ++ +L+
Sbjct: 204 PMLERWLLDANNVL---RESKDGQSVVIPTPIQLDPISISRKRKKRTSIDAKKRTTLDKQ 260
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS E + AIAE+ ++K VVRVWFCN+RQKQKR+
Sbjct: 261 FERNPKPSSEDLQAIAEECKMEKEVVRVWFCNRRQKQKRI 300
>gi|149058154|gb|EDM09311.1| POU domain, class 2, transcription factor 1, isoform CRA_g [Rattus
norvegicus]
Length = 607
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 271 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 324
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 325 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 384
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 385 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 433
>gi|345322664|ref|XP_003430617.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 328
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 159 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 215
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 216 FKNACKLKSILSKWLDEAEQVGALYNEK--------VGANERKRKRRTTISIAAKEALER 267
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +A+ L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 268 HFGEQSKPSSQEIMRMADGLNLEKEVVRVWFCNRRQREKRVK 309
>gi|671665|emb|CAA35051.1| Oct-1 transcription factor [Xenopus laevis]
Length = 760
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 104/171 (60%), Gaps = 14/171 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 291 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 344
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA--------GEKKRKRTSI 334
+L LS NM LKP+L+ WL +A + SVL + +++KRTSI
Sbjct: 345 ALNLSFKNMCKLKPLLEKWLNDAVLENITSDSTLTNQSVLNSPGHGMEGLNRRRKKRTSI 404
Query: 335 AAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 405 ETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 455
>gi|149056613|gb|EDM08044.1| POU domain, class 2, transcription factor 2, isoform CRA_b [Rattus
norvegicus]
Length = 430
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 106/167 (63%), Gaps = 12/167 (7%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L L
Sbjct: 138 HPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNL 194
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPE 338
S NM LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI
Sbjct: 195 SFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNV 253
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 254 RFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 300
>gi|374087739|gb|AEY82668.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 14/157 (8%)
Query: 233 DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N
Sbjct: 163 EIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNAC 219
Query: 293 ALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQ 349
LK IL WLEEAE N++ + E+KRKR T+I+ K +LE +F Q
Sbjct: 220 KLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALERHFGEQ 271
Query: 350 PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 272 SKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|15277218|dbj|BAB63311.1| POU-type homeodomain-containing DNA-binding protein [Homo sapiens]
gi|27544423|dbj|BAC54946.1| POU domain, class 5, transcription factor 1 [Homo sapiens]
gi|119623773|gb|EAX03368.1| POU domain, class 5, transcription factor 1, isoform CRA_c [Homo
sapiens]
gi|272718625|gb|ACZ95700.1| POU class 5 homeobox 1 transcript variant 2 [Homo sapiens]
Length = 265
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 108/166 (65%), Gaps = 8/166 (4%)
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTI 278
++P +Q D +ELE FA+ KQ+RI LG TQADVG L L G SQ+TI
Sbjct: 34 LLPFKIQSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKVFSQTTI 89
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
CRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRTSI
Sbjct: 90 CRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKRTSIENRV 146
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
+ +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 147 RGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 192
>gi|57094756|ref|XP_538830.1| PREDICTED: POU domain, class 5, transcription factor 1 [Canis lupus
familiaris]
Length = 360
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 126/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPVM-PPGL 225
P P P++ Y GP + + GA GA+ P PPG+
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLLPQGGLDTSQPEGERGAGLEGSSEGASPEPCAAPPGV 121
Query: 226 QHPDTDT---DPRE----------LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
PD + +P E LE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKPDKEKLEQNPEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|2058330|emb|CAA73198.1| Oct-2 alpha transcription factor [Ictalurus punctatus]
Length = 446
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 105/171 (61%), Gaps = 12/171 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P H + +D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 191 PVTSHAEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 247
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKRTSI 334
+L LS NM LKP+L+ WL +AE + + + LPA +++KRTSI
Sbjct: 248 ALNLSFKNMCKLKPLLEKWLTDAETMSMDSTLPSPSSLSSPSLGFEGLPA-RRRKKRTSI 306
Query: 335 AAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F+ +P+ E+I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 307 ETNVRVALERTFSTNQKPTSEEILLIAEQLNMEKEVIRVWFCNRRQKEKRI 357
>gi|83318947|emb|CAJ38811.1| Pit1 protein [Platynereis dumerilii]
Length = 334
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 96/152 (63%), Gaps = 10/152 (6%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
RELE FA FK RRIKLG TQ +VG ALA + SQ+TICRFE+L LS+ N L
Sbjct: 163 RELEQFAANFKSRRIKLGFTQTNVGNALARVH---GSVFSQTTICRFENLQLSYKNACKL 219
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
+PIL+ WLE+AE ++ + + ++++RT+I+ K +LE +F QP+PS
Sbjct: 220 RPILEQWLEDAERAYQDDKNGM-------SDRRRKRRTTISVLAKDALERHFCRQPKPSS 272
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
I IA L L K VVRVWFCN+RQ+ KR+K
Sbjct: 273 HDICRIAGALHLDKEVVRVWFCNRRQRDKRVK 304
>gi|395528482|ref|XP_003766358.1| PREDICTED: uncharacterized protein LOC100922903 [Sarcophilus
harrisii]
Length = 788
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 122/222 (54%), Gaps = 15/222 (6%)
Query: 173 PTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASH-HHGATHHPVMPPGLQHPDTD 231
PTPN QL S + G LP H H + PP HP+
Sbjct: 212 PTPNLFQLPQQSQGALLTSQPRAGLPTQAVTRPTLPDPHLSHSQPTKCLEPP--SHPEEP 269
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L LS NM
Sbjct: 270 SDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNM 326
Query: 292 IALKPILQAWLEEAEAQAKNKRR-DPD---APSV----LPAGEKKRKRTSIAAPEKRSLE 343
LKP+L+ WL +AE + + P+ +PS+ LP G +++KRTSI + +LE
Sbjct: 327 CKLKPLLEKWLNDAETMSVDSSLPSPNQLTSPSLGFDGLP-GRRRKKRTSIETNVRFALE 385
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 386 KSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 427
>gi|374087727|gb|AEY82662.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087731|gb|AEY82664.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 14/157 (8%)
Query: 233 DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N
Sbjct: 163 EIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNAC 219
Query: 293 ALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQ 349
LK IL WLEEAE N++ + E+KRKR T+I+ K +LE +F Q
Sbjct: 220 KLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALERHFGEQ 271
Query: 350 PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 272 SKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|291045104|ref|NP_001166912.1| POU domain, class 5, transcription factor 1 [Felis catus]
gi|264670131|gb|ACY72350.1| POU domain class 5 transcription factor 1 [Felis catus]
Length = 360
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPVM-PPGL 225
P P P++ Y GP + + GA S+ GA+ P PPG
Sbjct: 62 PCPPPYEFCGGMTYCGPQVGVGLVPQGGLETSQPEGERGAGVESNSEGASPEPCAAPPGA 121
Query: 226 QHPDTD-----TDP--------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
PD + T+ ++LE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKPDKEKLEQNTEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|380015441|ref|XP_003691710.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Apis
florea]
Length = 514
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 295 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 351
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P + P P G +++KRTSI + +LE F P+P+
Sbjct: 352 KWLEDAD----NSLNNPGSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTS 407
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 408 EEITVLADSLAMEKEVVRVWFCNRRQKEKRI 438
>gi|374087705|gb|AEY82651.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087733|gb|AEY82665.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 14/157 (8%)
Query: 233 DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMI 292
+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N
Sbjct: 163 EIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNAC 219
Query: 293 ALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQ 349
LK IL WLEEAE N++ + E+KRKR T+I+ K +LE +F Q
Sbjct: 220 KLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALERHFGEQ 271
Query: 350 PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 272 SKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|345322668|ref|XP_003430619.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 4 [Ornithorhynchus anatinus]
Length = 329
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 160 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 216
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 217 FKNACKLKSILSKWLDEAEQVGALYNEK--------VGANERKRKRRTTISIAAKEALER 268
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +A+ L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 269 HFGEQSKPSSQEIMRMADGLNLEKEVVRVWFCNRRQREKRVK 310
>gi|293612232|gb|ADE48544.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG AL L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLALGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|332020471|gb|EGI60886.1| POU domain, class 2, transcription factor 1 [Acromyrmex echinatior]
Length = 563
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 349 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 405
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P++ P P G +++KRTSI + +LE F P+P+
Sbjct: 406 KWLEDAD----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKSFIQNPKPTS 461
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 462 EEITILADSLAMEKEVVRVWFCNRRQKEKRI 492
>gi|206146|gb|AAA41853.1| PIT-1-beta [Rattus norvegicus]
Length = 291
Score = 141 bits (356), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 148/291 (50%), Gaps = 44/291 (15%)
Query: 121 HHHHSGALPASHHHV----ATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN 176
HH + LPAS+H PS+L Q L S+++ T T + P+
Sbjct: 2 HHSAAEGLPASNHATNVMSTVPSILSLIQTP----KCLHTYFSMTTMGNTATGLHYSVPS 57
Query: 177 PHQLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG------------ 224
H + S YG ++ + H+ SH H P++
Sbjct: 58 CHYGNQPSTYGVMAGTLTPCLYKFPDHT----LSHGFPPLHQPLLAEDPTASEFKQELRR 113
Query: 225 ----LQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 114 KSKLVEEPIDMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 170
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WLEEAE N++ + A E+KRKR T+I+
Sbjct: 171 CRFENLQLSFKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTIS 222
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 223 IAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>gi|288869|emb|CAA77952.1| octamer binding protein 3B [Homo sapiens]
Length = 265
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 108/166 (65%), Gaps = 8/166 (4%)
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTI 278
++P +Q D +ELE FA+ KQ+RI LG TQADVG L L G SQ+TI
Sbjct: 34 LLPFKIQSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKVFSQTTI 89
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE 338
CRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRTSI
Sbjct: 90 CRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKRTSIENRV 146
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
+ +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 147 RGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 192
>gi|328777641|ref|XP_001122806.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Apis
mellifera]
Length = 517
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 98/151 (64%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 298 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 354
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A+ N +P + P P G +++KRTSI + +LE F P+P+
Sbjct: 355 KWLEDAD----NSLNNPGSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTS 410
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 411 EEITVLADSLAMEKEVVRVWFCNRRQKEKRI 441
>gi|206143|gb|AAA41851.1| PIT-1-alpha [Rattus norvegicus]
Length = 265
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 139/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H +GL + ++ M+T T + P+ H + S YG ++ + H+
Sbjct: 1 MHHSAAEGLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGTLTPCLYKFPDHT- 59
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 60 ---LSHGFPPLHQPLLAEDPTASEFKQELRRKSKLVEEPIDMDSPEIRELEQFANEFKVR 116
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 117 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 173
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F +PS ++I +AE+L
Sbjct: 174 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEEL 225
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 226 NLEKEVVRVWFCNRRQREKRVK 247
>gi|53468|emb|CAA49791.1| oct-1 [Mus musculus]
gi|1095486|prf||2109222A transcription factor oct-1b
Length = 717
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 249 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 302
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 303 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 362
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 363 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 411
>gi|226217|prf||1501352A Ig octamer transcription factor
Length = 478
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/179 (45%), Positives = 110/179 (61%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG T DVG A+ L S
Sbjct: 180 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTPGDVGLAMGKLY---GNDFS 236
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 237 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 295
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 296 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 354
>gi|327343217|dbj|BAK09361.1| pituitary-specific positive transcription factor 1 variant w [Mus
musculus]
Length = 289
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 121 DMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 177
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 178 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISVAAKDALER 229
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 230 HFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 271
>gi|13432199|sp|Q04788.3|PIT1_PIG RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
Length = 291
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/262 (37%), Positives = 139/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPASNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH + P++P ++ P D D+ + RELE F FK R
Sbjct: 86 ---LSHGFPPMYQPLLPEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFPNEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>gi|161076884|ref|NP_001097153.1| nubbin, isoform B [Drosophila melanogaster]
gi|157400152|gb|ABV53675.1| nubbin, isoform B [Drosophila melanogaster]
Length = 961
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 792 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 848
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 849 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQ 906
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 907 KPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRI 941
>gi|148707263|gb|EDL39210.1| POU domain, class 2, transcription factor 1, isoform CRA_c [Mus
musculus]
Length = 608
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 272 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 325
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 326 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 385
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 386 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 434
>gi|293612324|gb|ADE48583.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 130/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG+ L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGRILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|148707264|gb|EDL39211.1| POU domain, class 2, transcription factor 1, isoform CRA_d [Mus
musculus]
Length = 717
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 249 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 302
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 303 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 362
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 363 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 411
>gi|340629179|gb|AEK64516.1| POU domain class 5 transcription factor 1 [Capra hircus]
Length = 360
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE+ F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|426217077|ref|XP_004002780.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Ovis aries]
Length = 682
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
LP S AT + P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 201 LPQSQ---ATPKRIDTPSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--K 252
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP----DAPSVL 322
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + ++P +
Sbjct: 253 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGMG 311
Query: 323 PAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
G +++KRTSI + +LE F +P+ E+I IA++L+++K V+RVWFCN+RQ
Sbjct: 312 IEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 371
Query: 381 KQKRM 385
K+KR+
Sbjct: 372 KEKRI 376
>gi|53477|emb|CAA39679.1| Oct-1 protein [Mus musculus]
Length = 608
Score = 141 bits (355), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 272 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 325
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 326 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 385
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 386 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 434
>gi|354487500|ref|XP_003505911.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Cricetulus griseus]
gi|344252959|gb|EGW09063.1| POU domain, class 5, transcription factor 1 [Cricetulus griseus]
Length = 358
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 127/232 (54%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMN-------SMMTGHHHHHHHSGALPASHHHG---ATHHPVM 221
P P P++ Y GP + + T +G S T P++
Sbjct: 61 PCPPPYEFCGGVAYCGPQVGLGLVPPVGLETSQPEGQSGAGVENDSEESSPGPCTARPIV 120
Query: 222 PPGLQH----PDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-A 272
P L+ P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 121 PVKLEKVEPSPEESQDVKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKV 176
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 177 FSQTTICRFEALQLSFKNMCKLRPLLEKWVEEADNN-ENLQEICKAETLVQA--RKRKRT 233
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+PS ++I+AIA++L L+K+VVRVWFCN+RQK KR
Sbjct: 234 SIENRVRGNLENMFLQCPKPSLQQISAIADQLGLEKDVVRVWFCNRRQKGKR 285
>gi|47028623|gb|AAT09163.1| POU domain transcription factor oct-4 [Ambystoma mexicanum]
Length = 398
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 100/149 (67%), Gaps = 5/149 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA+ KQ+RI LG TQADVG AL L SQ+TICRFE+L LS NM L+
Sbjct: 188 DLEQFAKELKQKRITLGFTQADVGLALGALYGK---MFSQTTICRFEALQLSFKNMCKLR 244
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WL EA+ +N + + + L +KRKRTSI K +LEA+F P+P+ +
Sbjct: 245 PLLQRWLVEADTN-ENLQELCNLENALQQA-RKRKRTSIENSVKDNLEAFFLKCPKPTHQ 302
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
+IA I+E L+L+K+VVRVWFCN+RQK KR
Sbjct: 303 EIAHISEDLNLEKDVVRVWFCNRRQKGKR 331
>gi|348530906|ref|XP_003452951.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Oreochromis niloticus]
Length = 667
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 109/175 (62%), Gaps = 18/175 (10%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 207 PTLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 260
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD--APSVLPA--------GEKKRKRT 332
+L LS NM LKP+L+ WL +A A+N D +PS L + +++KRT
Sbjct: 261 ALNLSFKNMCKLKPLLEKWLNDAVC-AENLTSDQSLSSPSALGSQGMGIEGINRRRKKRT 319
Query: 333 SIAAPEKRSLEAYFAVQ-PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
SI + +LE F Q +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 320 SIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRIN 374
>gi|198474117|ref|XP_001356560.2| GA19468 [Drosophila pseudoobscura pseudoobscura]
gi|198138256|gb|EAL33624.2| GA19468 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 450 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 506
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 507 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQ 564
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I+ +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 565 KPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 599
>gi|426217075|ref|XP_004002779.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Ovis aries]
Length = 750
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
LP S AT + P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 269 LPQSQ---ATPKRIDTPSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--K 320
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP----DAPSVL 322
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + ++P +
Sbjct: 321 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGMG 379
Query: 323 PAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
G +++KRTSI + +LE F +P+ E+I IA++L+++K V+RVWFCN+RQ
Sbjct: 380 IEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 439
Query: 381 KQKRM 385
K+KR+
Sbjct: 440 KEKRI 444
>gi|417412567|gb|JAA52662.1| Putative pou domain class 2 transcription factor 1-like isoform 1,
partial [Desmodus rotundus]
Length = 753
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 110/185 (59%), Gaps = 15/185 (8%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
LP S AT + P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 269 LPQSQ---ATPKRIDTPSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--K 320
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPS 320
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE A + +
Sbjct: 321 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGQG 379
Query: 321 VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
+ +++KRTSI + +LE F +P+ E+I IAE+L+++K V+RVWFCN+RQ
Sbjct: 380 IEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIAEQLNMEKEVIRVWFCNRRQ 439
Query: 381 KQKRM 385
K+KR+
Sbjct: 440 KEKRI 444
>gi|348534331|ref|XP_003454655.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Oreochromis niloticus]
Length = 589
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 99/162 (61%), Gaps = 12/162 (7%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA FKQRRIKLG TQ DVG A+ L SQ+TI RFE+L LS NM
Sbjct: 189 SDLEELEQFARTFKQRRIKLGFTQGDVGVAMGKLY---GNDFSQTTISRFEALNLSFKNM 245
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKRTSIAAPEKRSLE 343
LKP+L+ WL +AE A + + LP G +++KRTSI + LE
Sbjct: 246 CKLKPLLEKWLSDAETMAVDSMLPSPSSISSPMLGIEGLP-GRRRKKRTSIETNVRVVLE 304
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F+ +P+ E+I +AE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 305 RNFSTNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRI 346
>gi|345322672|ref|XP_003430620.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 5 [Ornithorhynchus anatinus]
Length = 316
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 147 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 203
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 204 FKNACKLKSILSKWLDEAEQVGALYNEK--------VGANERKRKRRTTISIAAKEALER 255
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +A+ L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 256 HFGEQSKPSSQEIMRMADGLNLEKEVVRVWFCNRRQREKRVK 297
>gi|195351089|ref|XP_002042069.1| GM26870 [Drosophila sechellia]
gi|194123893|gb|EDW45936.1| GM26870 [Drosophila sechellia]
Length = 601
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 432 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 488
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 489 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQ 546
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 547 KPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRI 581
>gi|1708266|sp|Q05749.2|PIT1_MELGA RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|1450387|gb|AAB04690.1| Pit-1beta* [Meleagris gallopavo]
Length = 370
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 103/162 (63%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+ LS
Sbjct: 201 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENSQLS 257
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 258 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIAAKEALER 309
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 310 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 351
>gi|91717341|gb|ABE57118.1| pituitary specific transcription factor 1 [Papio anubis]
Length = 227
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 74 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 130
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 131 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 182
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 183 HFGEQNKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 224
>gi|345322666|ref|XP_003430618.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 292
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 123 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 179
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WL+EAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 180 FKNACKLKSILSKWLDEAEQVGALYNEK--------VGANERKRKRRTTISIAAKEALER 231
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +A+ L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 232 HFGEQSKPSSQEIMRMADGLNLEKEVVRVWFCNRRQREKRVK 273
>gi|293612244|gb|ADE48550.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 129/233 (55%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE+ F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLESLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|195147630|ref|XP_002014782.1| GL19353 [Drosophila persimilis]
gi|194106735|gb|EDW28778.1| GL19353 [Drosophila persimilis]
Length = 619
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 449 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 505
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 506 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQ 563
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I+ +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 564 KPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 598
>gi|344287047|ref|XP_003415267.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
1 [Loxodonta africana]
Length = 757
Score = 140 bits (354), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 106/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLDEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP----DAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + ++P + G +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGLGIEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 451
>gi|195578779|ref|XP_002079241.1| GD23844 [Drosophila simulans]
gi|194191250|gb|EDX04826.1| GD23844 [Drosophila simulans]
Length = 601
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 432 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 488
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 489 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQ 546
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 547 KPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRI 581
>gi|194861123|ref|XP_001969720.1| GG23791 [Drosophila erecta]
gi|190661587|gb|EDV58779.1| GG23791 [Drosophila erecta]
Length = 604
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 435 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 491
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 492 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQ 549
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 550 KPTSEEITQLADRLGMEKEVVRVWFCNRRQKEKRI 584
>gi|344287049|ref|XP_003415268.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
2 [Loxodonta africana]
Length = 682
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 106/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 214 PSLDEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 267
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP----DAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + ++P + G +++KRTSI
Sbjct: 268 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGLGIEGLNRRRKKRTSIET 327
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 328 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 376
>gi|47226924|emb|CAG05816.1| unnamed protein product [Tetraodon nigroviridis]
Length = 757
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/183 (44%), Positives = 110/183 (60%), Gaps = 27/183 (14%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 293 PTLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 346
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA--------GEKKRKRTSI 334
+L LS NM LKP+L+ WL +AE ++ +PS L + +++KRTSI
Sbjct: 347 ALNLSFKNMCKLKPLLEKWLNDAENLTSDQALS--SPSALGSPGLGIEGINRRRKKRTSI 404
Query: 335 -----AAPEKRSLE------AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQK 383
A EK LE A F +P+ E+IA IA++L+++K V+RVWFCN+RQK+K
Sbjct: 405 ETNIRVALEKSFLEGISGFFALFKQNQKPTSEEIAMIADELNMEKEVIRVWFCNRRQKEK 464
Query: 384 RMK 386
R+
Sbjct: 465 RIN 467
>gi|432102072|gb|ELK29891.1| POU domain, class 2, transcription factor 1 [Myotis davidii]
Length = 821
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 110/185 (59%), Gaps = 15/185 (8%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
LP S AT + P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 340 LPQSQ---ATPKRIDTPSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--K 391
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-- 324
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + + P
Sbjct: 392 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGQG 450
Query: 325 ----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
+++KRTSI + +LE F +P+ E+I IAE+L+++K V+RVWFCN+RQ
Sbjct: 451 IEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIAEQLNMEKEVIRVWFCNRRQ 510
Query: 381 KQKRM 385
K+KR+
Sbjct: 511 KEKRI 515
>gi|326913132|ref|XP_003202895.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Meleagris gallopavo]
Length = 751
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 103/169 (60%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 283 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 336
Query: 283 SLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + +++KRTSI
Sbjct: 337 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLSSPSALNSPGQGIEGVNRRRKKRTSIET 396
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 397 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 445
>gi|37729474|gb|AAO45298.1| transcription factor OCT-1Z [Mus musculus]
Length = 522
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 278 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 331
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 332 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 391
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 392 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 440
>gi|410985787|ref|XP_003999198.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 2
[Felis catus]
Length = 744
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGLSSPSALNSPGLGMEGLNRRRKKRTSIET 390
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 391 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 439
>gi|219686273|dbj|BAH08689.1| POU domain class 5 transcription factor 1 [Pagrus major]
Length = 436
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 99/152 (65%), Gaps = 6/152 (3%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIA 293
R LE FA+ K +RI LG TQADVG AL NL G + SQ+TICRFE+L LS NM
Sbjct: 260 RNLEQFAKELKHKRITLGFTQADVGLALGNL----YGKMFSQTTICRFEALQLSFKNMCK 315
Query: 294 LKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
LKP+LQ WL EAE + N + V K+++RTS+ + +LE+YF P+P+
Sbjct: 316 LKPLLQRWLNEAET-SDNPQDMYKIERVFVDTRKRKRRTSLEGAVRSALESYFIKCPKPN 374
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
++I I++ L L+++VVRVWFCN+RQK KR+
Sbjct: 375 TQEITHISDDLGLERDVVRVWFCNRRQKGKRL 406
>gi|17136366|ref|NP_476659.1| nubbin, isoform D [Drosophila melanogaster]
gi|400745|sp|P31368.1|PDM1_DROME RecName: Full=Protein nubbin; AltName: Full=POU domain protein 1;
Short=PDM-1; AltName: Full=Protein twain; AltName:
Full=dOCT1; AltName: Full=dPOU-19
gi|157288|gb|AAA28480.1| dPOU-19 [Drosophila melanogaster]
gi|158150|gb|AAA28829.1| POU domain protein [Drosophila melanogaster]
gi|21392124|gb|AAM48416.1| RE34782p [Drosophila melanogaster]
gi|22946343|gb|AAF53205.2| nubbin, isoform D [Drosophila melanogaster]
gi|220942510|gb|ACL83798.1| nub-PD [synthetic construct]
Length = 601
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 432 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 488
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 489 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQ 546
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 547 KPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRI 581
>gi|45382673|ref|NP_990803.1| POU domain, class 2, transcription factor 1 [Gallus gallus]
gi|123398|sp|P15143.1|PO2F1_CHICK RecName: Full=POU domain, class 2, transcription factor 1; AltName:
Full=NF-A1; AltName: Full=Octamer-binding protein 1;
Short=Oct-1; AltName: Full=Octamer-binding transcription
factor 1; Short=OTF-1
gi|212467|gb|AAA48993.1| octamer-binding protein [Gallus gallus]
Length = 739
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 103/169 (60%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 271 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 324
Query: 283 SLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + +++KRTSI
Sbjct: 325 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLSSPSALNSPGQGIEGVNRRRKKRTSIET 384
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 385 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 433
>gi|301784019|ref|XP_002927423.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Ailuropoda melanoleuca]
Length = 756
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGLSSPSALNSPGLGMEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 451
>gi|195472405|ref|XP_002088491.1| GE18594 [Drosophila yakuba]
gi|194174592|gb|EDW88203.1| GE18594 [Drosophila yakuba]
Length = 603
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 434 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 490
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 491 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQ 548
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 549 KPTSEEITQLADRLGMEKEVVRVWFCNRRQKEKRI 583
>gi|296489913|tpg|DAA32026.1| TPA: POU class 2 homeobox 1 [Bos taurus]
Length = 731
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
LP S AT + P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 276 LPQSQ---ATPKRIDTPSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--K 327
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP----DAPSVL 322
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + ++P +
Sbjct: 328 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGMG 386
Query: 323 PAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
G +++KRTSI + +LE F +P+ E+I IA++L+++K V+RVWFCN+RQ
Sbjct: 387 IEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 446
Query: 381 KQKRM 385
K+KR+
Sbjct: 447 KEKRI 451
>gi|245324|gb|AAB21409.1| POU domain gene [Drosophila melanogaster]
Length = 601
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 432 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 488
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 489 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQ 546
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 547 KPTSEEITQLADRLSMEKEVVRVWFCNRRQKEKRI 581
>gi|115497644|ref|NP_001069050.1| POU domain, class 2, transcription factor 1 [Bos taurus]
gi|111305157|gb|AAI20289.1| POU class 2 homeobox 1 [Bos taurus]
Length = 730
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
LP S AT + P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 276 LPQSQ---ATPKRIDTPSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--K 327
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP----DAPSVL 322
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + ++P +
Sbjct: 328 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGMG 386
Query: 323 PAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
G +++KRTSI + +LE F +P+ E+I IA++L+++K V+RVWFCN+RQ
Sbjct: 387 IEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 446
Query: 381 KQKRM 385
K+KR+
Sbjct: 447 KEKRI 451
>gi|410985785|ref|XP_003999197.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 1
[Felis catus]
Length = 756
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGLSSPSALNSPGLGMEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 451
>gi|31620892|emb|CAD35743.1| ubiquitous transcription factor, isoform Oct-1ra [Mus musculus]
Length = 650
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 290 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 343
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 344 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 403
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 404 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 452
>gi|281312443|sp|B7ZQA9.1|P5F12_XENLA RecName: Full=POU domain, class 5, transcription factor 1.2;
AltName: Full=POU class V protein oct-91; Short=XlPOU91;
Short=Xoct-91
gi|213623434|gb|AAI69743.1| Xoct-91 protein [Xenopus laevis]
gi|213626624|gb|AAI69741.1| Xoct-91 protein [Xenopus laevis]
Length = 445
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIAL 294
E+E FA+ K +RI +G TQADVG AL L G SQ+TICRFESL LS NM L
Sbjct: 225 EMEQFAKDLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKL 280
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+L++WL E E +N + ++P +K++ RTSI K +LE YF +PS
Sbjct: 281 KPLLRSWLHEVENN-ENLQEIISRGQIIPQVQKRKHRTSIENNVKCTLENYFMQCSKPSA 339
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
++IA IA +L+++K+VVRVWFCN+RQK KR +
Sbjct: 340 QEIAQIARELNMEKDVVRVWFCNRRQKGKRQVY 372
>gi|149058152|gb|EDM09309.1| POU domain, class 2, transcription factor 1, isoform CRA_e [Rattus
norvegicus]
Length = 546
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 451
>gi|73960709|ref|XP_862700.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 3
[Canis lupus familiaris]
Length = 756
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGLSSPSALNSPGLGMEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 451
>gi|441594509|ref|XP_003271964.2| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 5, transcription
factor 1 [Nomascus leucogenys]
Length = 341
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 119/197 (60%), Gaps = 22/197 (11%)
Query: 203 HSGALPASHHHGATHHPV-MPPGL---------QHPDTDTD----PRELEAFAERFKQRR 248
+G S+ GA+ P +PPG Q+P+ D +ELE FA+ KQ+R
Sbjct: 79 EAGVGVESNSDGASPEPCTVPPGAVKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKR 138
Query: 249 IKLGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
I LG TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+
Sbjct: 139 ITLGYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADN 194
Query: 308 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 367
+N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+
Sbjct: 195 N-ENLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLE 251
Query: 368 KNVVRVWFCNQRQKQKR 384
K+VVRVWFCN+RQK KR
Sbjct: 252 KDVVRVWFCNRRQKGKR 268
>gi|195435093|ref|XP_002065536.1| GK15505 [Drosophila willistoni]
gi|194161621|gb|EDW76522.1| GK15505 [Drosophila willistoni]
Length = 614
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 444 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 500
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 501 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQ 558
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I+ +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 559 KPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 593
>gi|195114774|ref|XP_002001942.1| GI14486 [Drosophila mojavensis]
gi|193912517|gb|EDW11384.1| GI14486 [Drosophila mojavensis]
Length = 589
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 420 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 476
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 477 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQ 534
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I+ +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 535 KPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 569
>gi|345803297|ref|XP_003435042.1| PREDICTED: POU domain, class 2, transcription factor 1 [Canis lupus
familiaris]
Length = 704
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 237 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 290
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 291 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGLSSPSALNSPGLGMEGLNRRRKKRTSIET 350
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 351 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 399
>gi|345325373|ref|XP_001513218.2| PREDICTED: POU domain, class 2, transcription factor 1-like
[Ornithorhynchus anatinus]
Length = 744
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 109/174 (62%), Gaps = 16/174 (9%)
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTIC 279
+ PP L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI
Sbjct: 262 IDPPNLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTIS 315
Query: 280 RFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA--------GEKKRKR 331
RFE+L LS NM LKP+L+ WL +AE + + +PS + + +++KR
Sbjct: 316 RFEALNLSFKNMCKLKPLLEKWLNDAENLSTDSALS--SPSAVNSPGMGIEGLNRRRKKR 373
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
TSI + +LE F +P+ ++I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 374 TSIETNIRVALEKSFLENQKPTSDEITMIADQLNMEKEVIRVWFCNRRQKEKRI 427
>gi|440895547|gb|ELR47702.1| POU domain, class 2, transcription factor 1, partial [Bos grunniens
mutus]
Length = 504
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/185 (43%), Positives = 113/185 (61%), Gaps = 15/185 (8%)
Query: 207 LPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLK 266
LP S AT + P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ K
Sbjct: 270 LPQSQ---ATPKRIDTPSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--K 321
Query: 267 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP----DAPSVL 322
L G SQ+TI RFE+L LS NM LKP+L+ WL +AE + + ++P +
Sbjct: 322 LYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGMG 380
Query: 323 PAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQ 380
G +++KRTSI + +LE F +P+ E+I IA++L+++K V+RVWFCN+RQ
Sbjct: 381 IEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQ 440
Query: 381 KQKRM 385
K+KR+
Sbjct: 441 KEKRI 445
>gi|14279716|gb|AAK58704.1| VvlC protein [Steatoda triangulosa]
Length = 133
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 95/139 (68%), Gaps = 8/139 (5%)
Query: 244 FKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLE 303
FKQRRIKLG TQADVG AL L G SQ+TICRFE+L LS NM LKP+L WLE
Sbjct: 2 FKQRRIKLGFTQADVGLALGTL--YG-NVFSQTTICRFEALQLSFKNMCKLKPLLAKWLE 58
Query: 304 EAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 362
EA++ + P A + A G K++KRTSI K +LE +F QP+PS ++IA++A+
Sbjct: 59 EADSTTGS----PTAIDKIAAQGRKRKKRTSIEVSVKGALENHFHKQPKPSAQEIASLAD 114
Query: 363 KLDLKKNVVRVWFCNQRQK 381
L L+K VVRVWFCN+RQK
Sbjct: 115 SLQLEKEVVRVWFCNRRQK 133
>gi|149058147|gb|EDM09304.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Rattus
norvegicus]
gi|149058148|gb|EDM09305.1| POU domain, class 2, transcription factor 1, isoform CRA_a [Rattus
norvegicus]
Length = 557
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 300 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 353
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 354 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 413
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 414 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 462
>gi|14279718|gb|AAK58705.1| Vvl protein [Porcellio scaber]
Length = 133
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/139 (53%), Positives = 94/139 (67%), Gaps = 8/139 (5%)
Query: 244 FKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLE 303
FKQRRIKLG TQADVG AL L G SQ+TICRFE+L LS NM LKP+LQ WLE
Sbjct: 2 FKQRRIKLGFTQADVGLALGTL--YG-NVFSQTTICRFEALQLSFKNMCKLKPLLQKWLE 58
Query: 304 EAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 362
EA++ + P + + A G K++KRTSI K +LE +F QP+PS ++I +A+
Sbjct: 59 EADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITQLAD 114
Query: 363 KLDLKKNVVRVWFCNQRQK 381
L L+K VVRVWFCN+RQK
Sbjct: 115 SLQLEKEVVRVWFCNRRQK 133
>gi|91080429|ref|XP_968439.1| PREDICTED: similar to AGAP009500-PA [Tribolium castaneum]
Length = 578
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 99/151 (65%), Gaps = 12/151 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 383 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 439
Query: 300 AWLEEAEAQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
WLE+A++ N P A P P G +++KRTSI + +LE F P+P+
Sbjct: 440 KWLEDADSTLTN----PGALSNPMTTPETIGRRRKKRTSIETSVRVALEKAFVQNPKPTS 495
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 496 EEISMLADGLCMEKEVVRVWFCNRRQKEKRI 526
>gi|47213747|emb|CAF96412.1| unnamed protein product [Tetraodon nigroviridis]
Length = 341
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 14/163 (8%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 178 SDLEELEQFARTFKQRRIKLGFTQGDVGVAMG--KLYG-NDFSQTTISRFEALNLSFKNM 234
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSV---------LPAGEKKRKRTSIAAPEKRSL 342
LKP+L+ WL +AE A + P S+ LP G++++KRTSI + L
Sbjct: 235 CKLKPLLEKWLSDAETMAVDSML-PSPSSISNPMSGFEGLP-GKRRKKRTSIETNVRVIL 292
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E F +P+ E+I +AE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 293 ERNFNTNQKPTSEEILLLAEQLNMEKEVIRVWFCNRRQKEKRI 335
>gi|158288315|ref|XP_310195.4| AGAP009500-PA [Anopheles gambiae str. PEST]
gi|157019191|gb|EAA05862.4| AGAP009500-PA [Anopheles gambiae str. PEST]
Length = 400
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/154 (47%), Positives = 99/154 (64%), Gaps = 11/154 (7%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 228 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 284
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLP--------AGEKKRKRTSIAAPEKRSLEAYFAVQPR 351
WLE+A++ N +P+ L G +++KRTSI + +LE F V +
Sbjct: 285 KWLEDADSSISNPGGRIFSPAALSNTMATPETMGRRRKKRTSIETSVRVALEKAFLVNCK 344
Query: 352 PSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+ E+I+ +A+ L ++K VVRVWFCN+RQK+KR+
Sbjct: 345 PTSEEISTLADNLCMEKEVVRVWFCNRRQKEKRI 378
>gi|194761346|ref|XP_001962890.1| GF14200 [Drosophila ananassae]
gi|190616587|gb|EDV32111.1| GF14200 [Drosophila ananassae]
Length = 622
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 453 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 509
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 510 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQ 567
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I+ +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 568 KPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 602
>gi|414380|gb|AAB28234.1| transcription factor Oct-1, partial [Mus sp.]
Length = 739
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 271 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 324
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+ LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 325 AWNLSFKNMCKLKPLLEKWLNDAENLSSDSTASSPSALNSPGLGAEGLNRRRKKRTSIET 384
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E I IAE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 385 NIRVALEKSFMENQKPTSEDITLIAEQLNMEKEVIRVWFCNRRQKEKRI 433
>gi|195401230|ref|XP_002059217.1| GJ16273 [Drosophila virilis]
gi|194156091|gb|EDW71275.1| GJ16273 [Drosophila virilis]
Length = 597
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 101/155 (65%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 428 FAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 484
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 485 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQ 542
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I+ +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 543 KPTSEEISQLADRLGMEKEVVRVWFCNRRQKEKRI 577
>gi|281348538|gb|EFB24122.1| hypothetical protein PANDA_017190 [Ailuropoda melanoleuca]
Length = 725
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 258 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 311
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 312 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGLSSPSALNSPGLGMEGLNRRRKKRTSIET 371
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 372 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 420
>gi|12382254|gb|AAG53085.1|AF268618_1 POU 5 domain protein [Homo sapiens]
gi|293612342|gb|ADE48591.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|293612352|gb|ADE48596.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173154|gb|ADW77354.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173159|gb|ADW77356.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173165|gb|ADW77359.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173223|gb|ADW77386.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173227|gb|ADW77388.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173291|gb|ADW77419.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173297|gb|ADW77422.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173301|gb|ADW77424.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173489|gb|ADW77511.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173491|gb|ADW77512.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173496|gb|ADW77514.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173500|gb|ADW77515.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173503|gb|ADW77516.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173506|gb|ADW77517.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 130/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NDENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|266634527|dbj|BAI49421.1| POU class 5 homeobox 1 [Microcebus murinus]
Length = 359
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/160 (48%), Positives = 105/160 (65%), Gaps = 8/160 (5%)
Query: 226 QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICRFESL 284
+ PD +ELE FA+ KQ+RI LG TQADVG L L G SQ+TICRFE+L
Sbjct: 134 ESPDVKALQKELEQFAKVLKQKRITLGYTQADVGLTLGVL----FGKVFSQTTICRFEAL 189
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRTSI + +LE
Sbjct: 190 QLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKRTSIENRVRGNLEN 246
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 247 LFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|444717885|gb|ELW58705.1| Pituitary-specific positive transcription factor 1 [Tupaia
chinensis]
Length = 249
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 106/162 (65%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 81 DMDSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 137
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 138 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 189
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS +++ +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 190 HFGEQNKPSSQELMRMAEELNLEKEVVRVWFCNRRQREKRVK 231
>gi|73960725|ref|XP_862886.1| PREDICTED: POU domain, class 2, transcription factor 1 isoform 9
[Canis lupus familiaris]
gi|345803294|ref|XP_003435041.1| PREDICTED: POU domain, class 2, transcription factor 1 [Canis lupus
familiaris]
Length = 744
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGLSSPSALNSPGLGMEGLNRRRKKRTSIET 390
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 391 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 439
>gi|1450389|gb|AAB04692.1| Pit-1 [Meleagris gallopavo]
Length = 334
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 103/162 (63%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+ LS
Sbjct: 165 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENSQLS 221
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 222 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIAAKEALER 273
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 274 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 315
>gi|293612260|gb|ADE48558.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGAL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|64078|emb|CAA49229.1| Pit-1/GHF-1 [Meleagris gallopavo]
Length = 327
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 103/162 (63%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+ LS
Sbjct: 158 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENSQLS 214
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 215 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIAAKEALER 266
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 267 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|327343219|dbj|BAK09362.1| pituitary-specific positive transcription factor 1 variant w
[Rattus norvegicus]
Length = 284
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 116 DMDSPEIRELEQFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 172
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE
Sbjct: 173 FKNACKLKAILSKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALER 224
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 225 HFGEHSKPSSQEIMRMAEELNLEKEVVRVWFCNRRQREKRVK 266
>gi|449485686|ref|XP_002193530.2| PREDICTED: POU domain, class 2, transcription factor 1 [Taeniopygia
guttata]
Length = 739
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 271 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 324
Query: 283 SLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + +++KRTSI
Sbjct: 325 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLSSPSALNSPGQGIEGLNRRRKKRTSIET 384
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ ++IA IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 385 NIRVALEKSFLENQKPTSDEIAMIADQLNMEKEVIRVWFCNRRQKEKRI 433
>gi|321173063|gb|ADW77315.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|426352327|ref|XP_004043665.1| PREDICTED: POU domain, class 5, transcription factor 1 [Gorilla
gorilla gorilla]
gi|293612222|gb|ADE48540.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|42560248|ref|NP_002692.2| POU domain, class 5, transcription factor 1 isoform 1 [Homo
sapiens]
gi|354721190|ref|NP_001238970.1| POU domain, class 5, transcription factor 1 [Pan troglodytes]
gi|397471609|ref|XP_003807379.1| PREDICTED: POU domain, class 5, transcription factor 1 [Pan
paniscus]
gi|400659|sp|Q01860.1|PO5F1_HUMAN RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding protein 4; Short=Oct-4; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|35169|emb|CAA77951.1| octamer binding protein 3A [Homo sapiens]
gi|86197978|dbj|BAE78630.1| POU domain, class 5, transcription factor 1 [Homo sapiens]
gi|90960929|dbj|BAE92816.1| POU domain, class 5, transcription factor 1, isoform 2 [Pan
troglodytes]
gi|90960932|dbj|BAE92818.1| POU domain, class 5, transcription factor 1, isoform 2 [Pan
troglodytes]
gi|109658914|gb|AAI17438.1| POU class 5 homeobox 1 [Homo sapiens]
gi|109659100|gb|AAI17436.1| POU class 5 homeobox 1 [Homo sapiens]
gi|114306804|dbj|BAF31281.1| OTF3 protein [Homo sapiens]
gi|119623772|gb|EAX03367.1| POU domain, class 5, transcription factor 1, isoform CRA_b [Homo
sapiens]
gi|261859842|dbj|BAI46443.1| POU class 5 homeobox 1 [synthetic construct]
gi|272718624|gb|ACZ95699.1| POU class 5 homeobox 1 transcript variant 1 [Homo sapiens]
gi|293612220|gb|ADE48539.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612225|gb|ADE48541.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612227|gb|ADE48542.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612234|gb|ADE48545.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612238|gb|ADE48547.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612250|gb|ADE48553.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612258|gb|ADE48557.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612262|gb|ADE48559.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|313882978|gb|ADR82975.1| POU class 5 homeobox 1 [synthetic construct]
gi|313883682|gb|ADR83327.1| POU class 5 homeobox 1 [synthetic construct]
gi|321173061|gb|ADW77314.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173065|gb|ADW77316.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173069|gb|ADW77318.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173074|gb|ADW77320.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173076|gb|ADW77321.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173078|gb|ADW77322.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173080|gb|ADW77323.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173083|gb|ADW77324.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173085|gb|ADW77325.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173087|gb|ADW77326.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173089|gb|ADW77327.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|38502936|sp|Q7YR49.1|PO5F1_PANTR RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|32127774|dbj|BAC78165.1| POU-type homeodomain-containing DNA-binding protein [Pan
troglodytes]
Length = 360
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|432934179|ref|XP_004081893.1| PREDICTED: pituitary-specific positive transcription factor 1-like
[Oryzias latipes]
Length = 361
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/290 (35%), Positives = 138/290 (47%), Gaps = 45/290 (15%)
Query: 126 GALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN--------- 176
G P S H+ TP Q ++ M EML + S L P PN
Sbjct: 61 GNGPPSLHYPVTPCHYSNQQATYGMMAAQEMLSASISQTRILQTCGVPHPNIVNGANPLQ 120
Query: 177 -----------PHQLHSSSM-----YGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPV 220
H L SSS + ++++T G + A + P
Sbjct: 121 GSLTPCIYKFPDHGLSSSSCALSHGFSSLPSTLLTADEAPGGTCGEVKADAQRKSMREPE 180
Query: 221 MPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
P + P RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICR
Sbjct: 181 DAPAMDSPQI----RELEMFANDFKIRRIKLGYTQTNVGEALAAVH---GSEFSQTTICR 233
Query: 281 FESLTLSHNNMIALKPILQAWLEEAE---AQAKNKRRDPDAPSVLPAGEKKRKR-TSIAA 336
FE+L LS N LK IL WL+EAE A +K + E+KRKR T+I+
Sbjct: 234 FENLQLSFKNACKLKAILAKWLDEAELAGALYNDK---------IGMNERKRKRRTTISL 284
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE F + +PS ++IA IA+ L L+K VVRVWFCN+RQ++KR+K
Sbjct: 285 GAKEALERSFVEKSKPSSQEIARIAKSLHLEKEVVRVWFCNRRQREKRVK 334
>gi|321173058|gb|ADW77313.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|313220566|emb|CBY31415.1| unnamed protein product [Oikopleura dioica]
Length = 461
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLS 287
D + EL+ FA+ FKQ+RIKLG TQ DVG A+ L G+ SQ+TI RFE+L LS
Sbjct: 205 DENIQLEELDRFAKEFKQKRIKLGFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLS 260
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
NM LKPIL+ WLE+AE ++ + L + +++KRTSI K +LE +F
Sbjct: 261 FKNMCKLKPILERWLEDAERYLTPNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFL 320
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RP+ +I ++E L++++ VRVWFCN+RQK+KR+
Sbjct: 321 RNSRPTSAEITQLSEDLEMERETVRVWFCNRRQKEKRI 358
>gi|293612256|gb|ADE48556.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKVLQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|293612252|gb|ADE48554.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|293612236|gb|ADE48546.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|289469934|gb|ADC96616.1| POU domain class 5 transcription factor 1 [Labeo rohita]
Length = 472
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 97/151 (64%), Gaps = 4/151 (2%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
+LE FA+ K +RI LG TQADVG AL NL SQ+TICRFE+L LS NM L
Sbjct: 255 EDLEQFAKELKHKRITLGFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKL 311
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+LQ WL EAE ++N + V K+++RTS+ + +LE+YF P+P+
Sbjct: 312 KPLLQRWLNEAE-NSENPQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFVKCPKPNT 370
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I I++ L L+++VVRVWFCN+RQK KR+
Sbjct: 371 LEITHISDDLGLERDVVRVWFCNRRQKGKRL 401
>gi|432883670|ref|XP_004074321.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Oryzias latipes]
Length = 496
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 101/162 (62%), Gaps = 12/162 (7%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
+D ELE FA FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM
Sbjct: 204 SDLEELEQFARTFKQRRIKLGFTQGDVGVAMG--KLYG-NDFSQTTISRFEALNLSFKNM 260
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSV--------LPAGEKKRKRTSIAAPEKRSLE 343
LKP+L+ WL +AE A + + LP G +++KRTSI + LE
Sbjct: 261 CKLKPLLEKWLSDAETMAVDSMLPSPSSLSSPLMGMEGLP-GRRRKKRTSIETNVRVILE 319
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F+ +P+ E+I +AE+L+++K V+RVWFCN+RQK+KR+
Sbjct: 320 RNFSTNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEKRI 361
>gi|293612288|gb|ADE48570.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|195035747|ref|XP_001989333.1| GH10114 [Drosophila grimshawi]
gi|193905333|gb|EDW04200.1| GH10114 [Drosophila grimshawi]
Length = 620
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%), Gaps = 14/155 (9%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ
Sbjct: 451 FAKTFKQRRIKLGFTQGDVGSAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQ 507
Query: 300 AWLEEAE--AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
WL++A+ QA DP A P ++ G +++KRTSI + +LE F
Sbjct: 508 KWLDDADRTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQ 565
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ E+I +A++L ++K VVRVWFCN+RQK+KR+
Sbjct: 566 KPTSEEITQLADRLGMEKEVVRVWFCNRRQKEKRI 600
>gi|444726715|gb|ELW67236.1| POU domain, class 2, transcription factor 1, partial [Tupaia
chinensis]
Length = 739
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 183 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 236
Query: 283 SLTLSHNNMIALKPILQAWLEEAE------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE A + + V +++KRTSI
Sbjct: 237 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGQGVEGLNRRRKKRTSIET 296
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 297 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 345
>gi|321173067|gb|ADW77317.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEGSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|293612248|gb|ADE48552.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTDPR----ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D + ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQEELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|293612269|gb|ADE48561.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGPILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|293612389|gb|ADE48610.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173369|gb|ADW77455.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLVTSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|156392214|ref|XP_001635944.1| predicted protein [Nematostella vectensis]
gi|156223042|gb|EDO43881.1| predicted protein [Nematostella vectensis]
Length = 162
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/161 (46%), Positives = 102/161 (63%), Gaps = 10/161 (6%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
T P EL FA++F+QRR+ LG TQADVG AL L LSQ+TICRFE+L LS NM
Sbjct: 4 TTPDELSTFAKQFRQRRVALGFTQADVGVALGTLY---GNVLSQTTICRFEALQLSLKNM 60
Query: 292 IALKPILQAWLEEAEAQAK----NKRRDPDAPSVLPAG---EKKRKRTSIAAPEKRSLEA 344
LKP+LQ WL+E +A + K+++P + +K+++RT I K LE
Sbjct: 61 CKLKPLLQKWLQETDASSSGHEGEKQQNPSNFAFATHNGPYKKRKRRTIIEKNVKGVLEN 120
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F PRPS I+++AE L L + VVRVWFCN+RQK++R+
Sbjct: 121 HFEKMPRPSTSDISSLAESLGLDREVVRVWFCNRRQKERRV 161
>gi|444727343|gb|ELW67842.1| POU domain, class 5, transcription factor 1 [Tupaia chinensis]
Length = 227
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/161 (47%), Positives = 105/161 (65%), Gaps = 8/161 (4%)
Query: 225 LQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICRFES 283
+Q D + +ELE FA+ KQ+RI LG TQADVG L L G SQ+TICRFE+
Sbjct: 1 MQSQDIEALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKVFSQTTICRFEA 56
Query: 284 LTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLE 343
L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRTSI + +LE
Sbjct: 57 LQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKRTSIENRVRGNLE 113
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
F P+P+ ++I IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 114 NMFLQCPKPTLQQIGHIAQQLGLEKDVVRVWFCNRRQKGKR 154
>gi|84374236|gb|ABC58218.1| transcription factor OctA2 [Oikopleura dioica]
Length = 461
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLS 287
D + EL+ FA+ FKQ+RIKLG TQ DVG A+ L G+ SQ+TI RFE+L LS
Sbjct: 205 DENIQLEELDRFAKEFKQKRIKLGFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLS 260
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
NM LKPIL+ WLE+AE ++ + L + +++KRTSI K +LE +F
Sbjct: 261 FKNMCKLKPILERWLEDAERYLTPNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFL 320
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RP+ +I ++E L++++ VRVWFCN+RQK+KR+
Sbjct: 321 RNSRPTSAEITQLSEDLEMERETVRVWFCNRRQKEKRI 358
>gi|84374234|gb|ABC58217.1| transcription factor OctA1 [Oikopleura dioica]
Length = 461
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLS 287
D + EL+ FA+ FKQ+RIKLG TQ DVG A+ L G+ SQ+TI RFE+L LS
Sbjct: 205 DENIQLEELDRFAKEFKQKRIKLGFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLS 260
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
NM LKPIL+ WLE+AE ++ + L + +++KRTSI K +LE +F
Sbjct: 261 FKNMCKLKPILERWLEDAERYLTPNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFL 320
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RP+ +I ++E L++++ VRVWFCN+RQK+KR+
Sbjct: 321 RNSRPTSAEITQLSEDLEMERETVRVWFCNRRQKEKRI 358
>gi|431916063|gb|ELK16317.1| POU domain, class 2, transcription factor 1 [Pteropus alecto]
Length = 972
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/169 (45%), Positives = 105/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 397 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 450
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P V G +++KRTSI
Sbjct: 451 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSGVSSPSALNSPGVGIEGLNRRRKKRTSIET 510
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L ++K V+RVWFCN+RQK+KR+
Sbjct: 511 NIRVALEKSFLENQKPTSEEITMIADQLSMEKEVIRVWFCNRRQKEKRI 559
>gi|321173353|gb|ADW77447.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPG- 224
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 225 --LQHPDTDTDP----------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
L+ + DP +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQDPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|321173347|gb|ADW77444.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|227430410|ref|NP_001153014.1| putative POU domain, class 5, transcription factor 1B [Homo
sapiens]
gi|357528826|sp|Q06416.2|P5F1B_HUMAN RecName: Full=Putative POU domain, class 5, transcription factor
1B; AltName: Full=Octamer-binding protein 3-like;
AltName: Full=Octamer-binding transcription factor
3-like
gi|12382249|gb|AAG53083.1|AF268615_1 POU 5 domain protein [Homo sapiens]
gi|82802834|gb|ABB92462.1| rcPOU5F1 [Homo sapiens]
gi|94490332|gb|ABF29403.1| POU domain transcription factor Oct-4 [Homo sapiens]
gi|293612283|gb|ADE48568.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|293612381|gb|ADE48606.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|293612398|gb|ADE48614.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173161|gb|ADW77357.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173168|gb|ADW77360.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173401|gb|ADW77470.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173423|gb|ADW77480.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173438|gb|ADW77487.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173442|gb|ADW77489.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173446|gb|ADW77491.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173461|gb|ADW77497.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173463|gb|ADW77498.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173467|gb|ADW77500.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173477|gb|ADW77505.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|149707840|ref|XP_001493063.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
1 [Equus caballus]
Length = 756
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 289 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 342
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS------VLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + + +++KRTSI
Sbjct: 343 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALSSPGLGIEGLNRRRKKRTSIET 402
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 403 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 451
>gi|341579644|gb|AEK81554.1| POU2 [Acipenser sinensis]
Length = 431
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/146 (49%), Positives = 92/146 (63%), Gaps = 4/146 (2%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ K +RI LG TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ
Sbjct: 222 FAKELKHKRITLGFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKLKPLLQ 278
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 359
WL EAE N + V K+++RTS+ + +LE+YF P+P+ + I
Sbjct: 279 RWLNEAE-NTDNPQDMYKIERVFADSRKRKRRTSLEVTVRGALESYFIKCPKPNTQDITQ 337
Query: 360 IAEKLDLKKNVVRVWFCNQRQKQKRM 385
IAE L L+K+VVRVWFCN+RQK KR+
Sbjct: 338 IAEDLRLEKDVVRVWFCNRRQKGKRL 363
>gi|293612279|gb|ADE48566.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|226372800|gb|ACO52025.1| POU domain, class 5, transcription factor 1 [Rana catesbeiana]
Length = 420
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 95/156 (60%), Gaps = 4/156 (2%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
E+E FA KQ+R+ LG TQADVG AL L SQ+TICRFESL LS+ NM LK
Sbjct: 210 EMEQFARDLKQKRVSLGFTQADVGYALGVLY---EKMFSQTTICRFESLQLSYKNMCQLK 266
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WL EAE + +N + + VL K+++RT+I K +LE YF P+P +
Sbjct: 267 PLLTRWLREAE-RNENLQELVNQEQVLIQSRKRKRRTNIENIAKDNLEIYFMKNPKPGPQ 325
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
++ IA L + K+VVRVWFCN+RQK KR H
Sbjct: 326 EMEQIARHLHMAKDVVRVWFCNRRQKDKRQIIKEPH 361
>gi|170672693|gb|ACB30023.1| POU class 5 homeobox 1 [Felis catus]
Length = 328
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPVM-PPGL 225
P P P++ Y GP + + GA S+ GA+ P PPG
Sbjct: 30 PCPPPYEFCGGMTYCGPQVGVGLVPQGGLETSQPEGERGAGVESNSEGASPEPCAAPPGA 89
Query: 226 QHPDTD-----TDP--------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
PD + T+ ++LE FA+ KQ+RI LG TQADVG L L G
Sbjct: 90 VKPDKEKLEQNTEESQDIKALQKDLEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 145
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ ++ + A +++ A +KRKR
Sbjct: 146 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ESLQEICKAETLVQA--RKRKR 202
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 203 TSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 255
>gi|321173285|gb|ADW77416.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|149707842|ref|XP_001493088.1| PREDICTED: POU domain, class 2, transcription factor 1-like isoform
2 [Equus caballus]
gi|338724510|ref|XP_003364956.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Equus
caballus]
Length = 744
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS------VLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + + +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALSSPGLGIEGLNRRRKKRTSIET 390
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 439
>gi|321173283|gb|ADW77415.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173293|gb|ADW77420.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173295|gb|ADW77421.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGFILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|321173349|gb|ADW77445.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYRGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|85822768|gb|ABC84854.1| POU5f1/POU2 [Gadus morhua]
Length = 227
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIAL 294
ELE FA+ K +RI LG TQADVG AL NL G + SQ+TICRFE+L LS NM L
Sbjct: 8 ELEQFAKELKHKRITLGFTQADVGLALGNL----YGKMFSQTTICRFEALQLSFKNMCKL 63
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+LQ WL EAE + N + V K+++RTS+ + +LE+YF P+P+
Sbjct: 64 KPLLQRWLNEAET-SDNPQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFIKCPKPNT 122
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
I I++ L L+++VVRVWFCN+RQK KR+
Sbjct: 123 IDITHISDDLGLERDVVRVWFCNRRQKGKRL 153
>gi|293612281|gb|ADE48567.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|338724512|ref|XP_003364957.1| PREDICTED: POU domain, class 2, transcription factor 1-like [Equus
caballus]
Length = 704
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 237 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 290
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS------VLPAGEKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + + + + +++KRTSI
Sbjct: 291 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALSSPGLGIEGLNRRRKKRTSIET 350
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 351 NIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 399
>gi|449275800|gb|EMC84568.1| POU domain, class 2, transcription factor 1, partial [Columba
livia]
Length = 714
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/169 (44%), Positives = 106/169 (62%), Gaps = 12/169 (7%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 275 PNLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 328
Query: 283 SLTLSHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAG--EKKRKRTSIAA 336
+L LS NM LKP+L+ WL +AE + ++P + G +++KRTSI
Sbjct: 329 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLSSPSALNSPGLGIEGLNRRRKKRTSIET 388
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ ++I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 389 NIRVALEKSFLENQKPTSDEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>gi|42543138|pdb|1O4X|A Chain A, Ternary Complex Of The Dna Binding Domains Of The Oct1 And
Sox2 Transcription Factors With A 19mer Oligonucleotide
From The Hoxb1 Regulatory Element
Length = 167
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/163 (45%), Positives = 105/163 (64%), Gaps = 7/163 (4%)
Query: 227 HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
H + +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L L
Sbjct: 3 HMEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNL 59
Query: 287 SHNNMIALKPILQAWLEEAE----AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSL 342
S NM LKP+L+ WL +AE + + ++P + E+++KRTSI + +L
Sbjct: 60 SFKNMAKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSERRKKRTSIETNIRVAL 119
Query: 343 EAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 120 EKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 162
>gi|321173355|gb|ADW77448.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173361|gb|ADW77451.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|293612373|gb|ADE48604.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173359|gb|ADW77450.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173367|gb|ADW77454.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|321173413|gb|ADW77475.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIQNRVRGNLENLFQQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|321173148|gb|ADW77351.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKFLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|374087737|gb|AEY82667.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087749|gb|AEY82673.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 145/289 (50%), Gaps = 41/289 (14%)
Query: 125 SGALPASHHHVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMTTLTPMSDPTPNPH 178
SG + A H+ + PS Q S +G M G+ EML + S L S PNP+
Sbjct: 34 SGNVSAGLHY-SVPSCHYGNQASTYGVMAGIKPATPEMLSASLSQSRILQTCS--MPNPN 90
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP---------------- 222
++ S S+ + H + + H H ++
Sbjct: 91 VVNGVSTLQSSLTPCLYKFPEHALSASSCALGHSFTPMHQTLLSDDPTASDFKQEFRRKS 150
Query: 223 PGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICR
Sbjct: 151 KSVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICR 207
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAP 337
FE L S N LK IL WLEEAE N++ + E+KRKR T+I+
Sbjct: 208 FEDLQPSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIS 259
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 260 AKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|1621541|gb|AAB17254.1| Pit-1 [Oncorhynchus tshawytscha]
Length = 358
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 105/176 (59%), Gaps = 18/176 (10%)
Query: 219 PVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTI 278
P PP + P RELE FA FK RRIKLG TQ +VG+ALA + SQ+TI
Sbjct: 186 PDDPPNMDSPQI----RELEKFANDFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTI 238
Query: 279 CRFESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIA 335
CRFE+L LS N LK IL WL+EAE N++ + E+KRKR T+I+
Sbjct: 239 CRFENLQLSFKNACTLKAILAKWLDEAEQAGALFNEK--------MGMNERKRKRRTTIS 290
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
K +LE F + +PS ++I +AE L L+K VVRVWFCN+RQ++KR+K + H
Sbjct: 291 LGAKEALERSFGEKIKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREKRVKTSLHH 346
>gi|147899613|ref|NP_001082798.1| POU domain, class 2, transcription factor 1 [Danio rerio]
gi|134024827|gb|AAI34809.1| Pou2f1b protein [Danio rerio]
Length = 676
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 106/174 (60%), Gaps = 18/174 (10%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 211 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 264
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA----------GEKKRKRT 332
+L LS NM LKP+L+ WL +A A+N+ D S +++KRT
Sbjct: 265 ALNLSFKNMCKLKPLLEKWLNDAVC-AENQTSDQALSSPSSLGSPGLGMEGLNRRRKKRT 323
Query: 333 SIAAPEKRSLEAYFAVQ-PRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
SI + +LE F Q +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 324 SIETNIRVALEKSFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 377
>gi|348515653|ref|XP_003445354.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Oreochromis niloticus]
Length = 341
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 108/187 (57%), Gaps = 20/187 (10%)
Query: 204 SGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALA 263
SG + + + P P + P RELE FA FK RRIKLG TQ +VG+ALA
Sbjct: 143 SGEIKSDGQRKSMRDPEDAPAMDSPQI----RELEMFANDFKIRRIKLGYTQTNVGEALA 198
Query: 264 NLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---AQAKNKRRDPDAPS 320
+ SQ+TICRFE+L LS N LK IL WL+EAE A +K
Sbjct: 199 AVH---GSEFSQTTICRFENLQLSFKNACKLKAILAKWLDEAELAGALYNDK-------- 247
Query: 321 VLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQR 379
+ E+KRKR T+I+ K +LE F + +PS ++IA IA+ L L+K VVRVWFCN+R
Sbjct: 248 -IGMNERKRKRRTTISLGAKEALERSFVEKSKPSSQEIARIAKGLHLEKEVVRVWFCNRR 306
Query: 380 QKQKRMK 386
Q++KR+K
Sbjct: 307 QREKRVK 313
>gi|321173150|gb|ADW77352.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173152|gb|ADW77353.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173221|gb|ADW77385.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173351|gb|ADW77446.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173357|gb|ADW77449.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173365|gb|ADW77453.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173397|gb|ADW77468.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173403|gb|ADW77471.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173408|gb|ADW77473.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173419|gb|ADW77478.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|293612356|gb|ADE48597.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|374087703|gb|AEY82650.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087725|gb|AEY82661.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/289 (35%), Positives = 145/289 (50%), Gaps = 41/289 (14%)
Query: 125 SGALPASHHHVATPSLLLFPQMSHHG-MDGL-----EMLDSISSSMTTLTPMSDPTPNPH 178
SG + A H+ + PS Q S +G M G+ EML + S L S PNP+
Sbjct: 34 SGKVSAGLHY-SVPSCHYGNQASTYGVMAGIKPATPEMLSASLSQSRILQTCS--MPNPN 90
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP---------------- 222
++ S S+ + H + + H H ++
Sbjct: 91 VVNGVSTLQSSLTPCLYKFPEHALSASSCALGHSFTPMHQTLLSDDPTASDFKQEFRRKS 150
Query: 223 PGLQHP-DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICR 280
++ P D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICR
Sbjct: 151 KSVEEPVDMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICR 207
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAP 337
FE L S N LK IL WLEEAE N++ + E+KRKR T+I+
Sbjct: 208 FEDLQPSFKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISIS 259
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE +F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 260 AKEALERHFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|410897143|ref|XP_003962058.1| PREDICTED: pituitary-specific positive transcription factor 1-like
[Takifugu rubripes]
Length = 361
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 142/288 (49%), Gaps = 41/288 (14%)
Query: 126 GALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSM 185
G P S H+ TP Q ++ M EML + S L + P+P+ + +++
Sbjct: 73 GNTPPSLHYPVTPCHYSNQQATYGMMTAQEMLSASISQTRILQTCA--VPHPNMVSGANL 130
Query: 186 YGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMP-------PGLQHPDTD------T 232
G S+ + H SG+ SH + + PG+ D
Sbjct: 131 QG-SLTPCLYKFPDHGLSSGSCALSHGFSSLTSAFLSTDEAPGGPGVGEIKADPQGKNAR 189
Query: 233 DP-----------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRF 281
DP RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRF
Sbjct: 190 DPEDVPAMDSPQIRELEMFANDFKIRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRF 246
Query: 282 ESLTLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPE 338
E+L LS N LK IL WL+EAE N + + E+KRKR T+I+
Sbjct: 247 ENLQLSFKNACKLKAILAKWLDEAELAGALYNDK--------IGMNERKRKRRTTISLGA 298
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE F + +PS ++IA IA+ L L+K VVRVWFCN+RQ++KR+K
Sbjct: 299 KEALEHSFVEKSKPSSQEIARIAKGLHLEKEVVRVWFCNRRQREKRVK 346
>gi|344307652|ref|XP_003422494.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Loxodonta africana]
Length = 357
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 123/232 (53%), Gaps = 26/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGHH----HHHHHSGALPASHHHGATHHPVM-PPGL- 225
P P P++ Y GP + + GA S+ GA+ P PPG
Sbjct: 59 PCPPPYEFCGGMAYCGPQVGVGLPQGGPETPQPEGDPGAGVESNSEGASPEPCTGPPGAV 118
Query: 226 ------------QHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-A 272
+ D T ++LE FA+ KQ+RI LG TQADVG L L G
Sbjct: 119 KLEKEKMDENFEESQDIKTRQKDLEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKV 174
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + ++L +KRKRT
Sbjct: 175 FSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKTENLLQQA-RKRKRT 232
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + SLE F P+PS ++I IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 233 SIENRVRGSLENLFLQCPKPSLQQIGHIAQQLGLEKDVVRVWFCNRRQKGKR 284
>gi|214921|gb|AAA49998.1| XOCT-79, partial [Xenopus laevis]
Length = 304
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIAL 294
E+E FA+ K +RI +G TQADVG AL L G SQ+TICRFESL LS NM L
Sbjct: 84 EMEQFAKDLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKL 139
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+L++WL E E +N + ++P +K++ RTSI + +LE YF +PS
Sbjct: 140 KPLLRSWLHEVENN-ENLQEIISRGQIIPQVQKRKHRTSIEDNVRHTLENYFMQCSKPSA 198
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
++IA IA +L+++K+VVRVWFCN+RQK KR +
Sbjct: 199 QEIAQIARELNMEKDVVRVWFCNRRQKGKRQVY 231
>gi|293612393|gb|ADE48612.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 128/233 (54%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESSSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|293612361|gb|ADE48599.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 130/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPG- 224
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 225 --LQHPDTDTDP----------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
L+ + +P +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQGIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NDENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|119623771|gb|EAX03366.1| POU domain, class 5, transcription factor 1, isoform CRA_a [Homo
sapiens]
Length = 361
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 129/234 (55%), Gaps = 29/234 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTDPR-----ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG 271
Q+P+ ++ R ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEEASELRRALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FG 177
Query: 272 -ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRK 330
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRK
Sbjct: 178 KVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRK 234
Query: 331 RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
RTSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 RTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 288
>gi|64378|emb|CAA48175.1| pituitary specific transcription factor [Salmo salar]
Length = 358
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 141/288 (48%), Gaps = 43/288 (14%)
Query: 129 PASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGP 188
P H+ TP Q ++ M EML + S L S P+P+ ++ ++
Sbjct: 77 PPGLHYPVTPCHYSNQQTTYGMMAAQEMLSASISQTRILQTCS--VPDPNMVNGANTLQG 134
Query: 189 SMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL---------------------QH 227
S+ + H G+ SH P +PP + +
Sbjct: 135 SLAPCLYKFPEHGLGGGSCSLSHSF-----PPLPPAVLSDEPPLGGTKDLRLRNRPPDEP 189
Query: 228 PDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
PD D+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L L
Sbjct: 190 PDMDSPQIRELEKFANDFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQL 246
Query: 287 SHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLE 343
S N LK IL WL+E E N++ + E+KRKR T+I+ K +LE
Sbjct: 247 SFKNACTLKTILAKWLDETEQAGALFNEK--------MGMNERKRKRRTTISRGAKEALE 298
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
F + +PS ++I +AE L L+K VVRVWFCN+RQ++KR+K + H
Sbjct: 299 RSFGQKIKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREKRVKTSLHH 346
>gi|321173427|gb|ADW77482.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 127/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPG- 224
P P P++L Y GP + + +G S+ G + P +PPG
Sbjct: 55 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSDGTSLEPCTVPPGA 114
Query: 225 --LQHPDTDTDP----------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
L+ + +P +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 115 VKLEKEKLEQNPQESQNIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 170
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE L LS NM L+P+LQ W+EEA+ +N + A ++L A +KRKR
Sbjct: 171 VFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEADNN-ENLQETCKAETLLQA--RKRKR 227
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+ QK K+
Sbjct: 228 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRCQKGKQ 280
>gi|47086331|ref|NP_998016.1| pituitary-specific positive transcription factor 1 [Danio rerio]
gi|37222775|gb|AAQ90147.1| pituitary-specific transcription factor [Danio rerio]
gi|190340169|gb|AAI62244.1| POU domain, class 1, transcription factor 1 [Danio rerio]
Length = 350
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 105/170 (61%), Gaps = 15/170 (8%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+ PD D+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L
Sbjct: 182 ETPDMDSPQIRELEKFANDFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENL 238
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRS 341
LS N LK IL WLEEAE N++ + E+KRKR T+I+ K +
Sbjct: 239 QLSFKNACKLKSILAKWLEEAEQAGALFNEK--------MGLHERKRKRRTTISLGAKEA 290
Query: 342 LEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
LE F + +PS ++I +AE L L+K VVRVWFCN+RQ++KR+K + H
Sbjct: 291 LERSFVEKSKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREKRVKTSLHH 340
>gi|269959231|gb|ACZ54718.1| POU2 [Macropus eugenii]
Length = 442
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLS 287
DT T ELE FA+ K +RI LG TQADVG AL L G + SQ+TICRFE+L LS
Sbjct: 226 DTPTS-EELELFAKELKHKRISLGFTQADVGMALGTL----YGKMFSQTTICRFEALQLS 280
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
NM LKP+LQ WL+ E N + VL K+++RTSI K +LE +F
Sbjct: 281 FKNMCKLKPLLQRWLQAVE-NTDNPQEMCSMEQVLAQARKRKRRTSIETSVKGTLEGFFR 339
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ ++I +AE+L L K+VVRVWFCN+RQK KR+
Sbjct: 340 RCGKPTPQQICDLAEELHLDKDVVRVWFCNRRQKGKRL 377
>gi|321173493|gb|ADW77513.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173508|gb|ADW77518.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+++GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNYNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 ASIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|85699824|gb|ABC74438.1| POU2 transcription factor [Oikopleura dioica]
Length = 461
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 100/158 (63%), Gaps = 5/158 (3%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLS 287
D + EL+ FA+ FKQ+RIKLG TQ DVG A+ L G+ SQ+TI RFE+L LS
Sbjct: 205 DENIQLEELDRFAKEFKQKRIKLGFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLS 260
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
NM LKPIL+ WLE+AE ++ + L + +++KRTSI K +LE +F
Sbjct: 261 FKNMCKLKPILERWLEDAERYLTPNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFL 320
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RP+ +I ++E L++++ VRVWFCN+RQK+KR+
Sbjct: 321 RNSRPTSAEITHLSEDLEMERETVRVWFCNRRQKEKRI 358
>gi|374087717|gb|AEY82657.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087729|gb|AEY82663.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 102/162 (62%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE L S
Sbjct: 158 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPS 214
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 215 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALER 266
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 267 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|334311989|ref|XP_003339690.1| PREDICTED: POU domain, class 5, transcription factor 1.1-like
[Monodelphis domestica]
Length = 452
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 99/158 (62%), Gaps = 7/158 (4%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLS 287
DT T ELE FA+ K +RI LG TQADVG AL L G + SQ+TICRFE+L LS
Sbjct: 236 DTPTS-EELELFAKELKHKRISLGFTQADVGMALGTL----YGKMFSQTTICRFEALQLS 290
Query: 288 HNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFA 347
NM LKP+LQ WL+ E +N + VL K+++RTSI K +LE +F
Sbjct: 291 FKNMCKLKPLLQRWLQAVE-NTENPQEMCSMEQVLAQARKRKRRTSIETSVKGTLEGFFR 349
Query: 348 VQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ ++I +AE+L L K+VVRVWFCN+RQK KR+
Sbjct: 350 RCGKPTPQQICDLAEELHLDKDVVRVWFCNRRQKGKRL 387
>gi|185132578|ref|NP_001117142.1| Pit-1 protein [Salmo salar]
gi|1431615|emb|CAA67433.1| Pit-1 protein [Salmo salar]
Length = 358
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 141/288 (48%), Gaps = 43/288 (14%)
Query: 129 PASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGP 188
P H+ TP Q ++ M EML + S L S P+P+ ++ ++
Sbjct: 77 PPGLHYPVTPCHFSNQQTTYGMMAAQEMLSASISQTRILQTCS--VPHPNMVNGANTLQG 134
Query: 189 SMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPGL---------------------QH 227
S+ + H G+ SH P +PP + +
Sbjct: 135 SLAPCLYKFPEHGLGGGSCSLSHSF-----PPLPPAVLSDEPPLGGTKDLRLRSRPPDEP 189
Query: 228 PDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
PD D+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L L
Sbjct: 190 PDMDSPQIRELEKFANDFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQL 246
Query: 287 SHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLE 343
S N LK IL WL+E E N++ + E+KRKR T+I+ K +LE
Sbjct: 247 SFKNACTLKTILAKWLDETEQAGALFNEK--------MGMNERKRKRRTTISLGAKEALE 298
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
F + +PS ++I +AE L L+K VVRVWFCN+RQ++KR+K + H
Sbjct: 299 RSFGQKIKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREKRVKTSLHH 346
>gi|293612240|gb|ADE48548.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 128/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQ+ KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQEGKR 287
>gi|374087723|gb|AEY82660.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087745|gb|AEY82671.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 102/162 (62%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE L S
Sbjct: 158 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPS 214
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 215 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALER 266
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 267 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 308
>gi|410904341|ref|XP_003965650.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Takifugu rubripes]
Length = 475
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 70/146 (47%), Positives = 94/146 (64%), Gaps = 4/146 (2%)
Query: 240 FAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQ 299
FA+ K +RI LG TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ
Sbjct: 264 FAKELKHKRITLGFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCRLKPLLQ 320
Query: 300 AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 359
WL EAE +N + V K+++RTS+ + +LEAYF P+P+ ++I
Sbjct: 321 KWLNEAET-TENPQDMYKVERVFVDTRKRKRRTSLEGAVRSALEAYFIKCPKPNTQEITH 379
Query: 360 IAEKLDLKKNVVRVWFCNQRQKQKRM 385
I++ L L+++VVRVWFCN+RQK KR+
Sbjct: 380 ISDDLGLERDVVRVWFCNRRQKGKRL 405
>gi|116871388|gb|ABK30790.1| Oct4 [Microtus levis]
gi|117380638|gb|ABK34451.1| POU domain class 5 transcription factor 1 [Microtus levis]
Length = 354
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 128/231 (55%), Gaps = 28/231 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHP--VMPPG 224
P P P++ Y GP + + +GA S+ GA+ P + P
Sbjct: 60 PCPQPYEFCGGMAYCGPQVGLGLVPQVSLETSQPEDRAGA--ESNSEGASPEPGTIRPGA 117
Query: 225 LQHPDTDTDP----------RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-AL 273
++ + P +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 118 VKLEKVEPSPEESQDMKDLQKELEQFAKVLKQKRITLGYTQADVGLTLGVL----FGKVF 173
Query: 274 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTS 333
SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +N + A +++ A +KRKRTS
Sbjct: 174 SQTTICRFEALQLSFKNMCKLRPLLEKWVEEADNN-ENLQEICKAETLVQA--RKRKRTS 230
Query: 334 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
I + +LE+ F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 231 IENGVRGNLESMFLQCPKPTLQQISIIAKQLGLEKDVVRVWFCNRRQKGKR 281
>gi|395506476|ref|XP_003757558.1| PREDICTED: POU domain, class 5, transcription factor 1.1-like
[Sarcophilus harrisii]
Length = 445
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 98/159 (61%), Gaps = 9/159 (5%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANL--KLPGVGALSQSTICRFESLTL 286
DT T ELE FA+ K +RI LG TQADVG AL L K+ SQ+TICRFE+L L
Sbjct: 229 DTPTS-EELELFAKELKHKRISLGFTQADVGMALGTLYGKM-----FSQTTICRFEALQL 282
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
S NM LKP+LQ WL+ E N + VL K+++RTSI K +LE +F
Sbjct: 283 SFKNMCKLKPLLQRWLQAVE-NTDNPQEMCSMEQVLAQARKRKRRTSIETSVKGTLEGFF 341
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+P+ ++I +AE+L L K+VVRVWFCN+RQK KR+
Sbjct: 342 RRCGKPTPQQICDLAEELHLDKDVVRVWFCNRRQKGKRL 380
>gi|51703255|gb|AAU09269.1| pituitary-specific transcription factor Pit-1 [Ctenopharyngodon
idella]
Length = 356
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 104/168 (61%), Gaps = 15/168 (8%)
Query: 228 PDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
PD D+ RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L L
Sbjct: 188 PDMDSPQIRELEKFANDFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQL 244
Query: 287 SHNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLE 343
S N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 245 SFKNACKLKSILAKWLEEAEQAGALFNEK--------MGMHERKRKRRTTISLGAKEALE 296
Query: 344 AYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
F + +PS ++I +AE L L+K VVRVWFCN+RQ++KR+K + H
Sbjct: 297 RNFVEKSKPSSQEIVRMAEGLHLEKEVVRVWFCNRRQREKRVKTSLHH 344
>gi|293612246|gb|ADE48551.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 127/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQT--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|297789|emb|CAA77953.1| octamer binding protein 3_like sequence [Homo sapiens]
Length = 359
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS N+ L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNICKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|167598248|gb|ABZ88149.1| pit-1b [Acanthopagrus schlegelii]
Length = 333
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 139/291 (47%), Gaps = 46/291 (15%)
Query: 126 GALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN----PHQLH 181
G P S H+ TP Q ++ M EML + S L P PN P+ L
Sbjct: 31 GNGPTSLHYPVTPCHYSNQQATYGMMAAQEMLSASISQTRILQTCGVPHPNMVSGPNPLQ 90
Query: 182 SS---SMYGPSMNSMMTGHHHHHHHSGALP-------------------ASHHHGATHHP 219
S +Y + + +G H +LP A + P
Sbjct: 91 GSLTPCLYKFPDHGLSSGSCALSHGFSSLPSAFLSTDEAPGGPSIGEVKADAQRKSVRDP 150
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTIC 279
P + P RELE FA FK RRIKLG TQ +VG+ALA + SQ+TIC
Sbjct: 151 EDAPTMDSPQI----RELEMFANDFKIRRIKLGYTQTNVGEALAAVH---GSEFSQTTIC 203
Query: 280 RFESLTLSHNNMIALKPILQAWLEEAE---AQAKNKRRDPDAPSVLPAGEKKRKR-TSIA 335
RFE+L LS N LK IL WL+EAE A +K + E+KRKR T+I+
Sbjct: 204 RFENLQLSFKNACKLKAILAKWLDEAELAGALYSDK---------IGMNERKRKRRTTIS 254
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE F + +PS ++IA IA+ L L+K VVRVWFCN+RQ++KR+K
Sbjct: 255 LGAKEALERSFVEKSKPSSQEIARIAKGLHLEKEVVRVWFCNRRQREKRVK 305
>gi|321173399|gb|ADW77469.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 27/232 (11%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPHVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGA 272
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVLF---EKV 178
Query: 273 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 332
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 179 FSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKRT 235
Query: 333 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
SI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 236 SIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKSKR 286
>gi|441654506|ref|XP_003281024.2| PREDICTED: POU domain, class 2, transcription factor 2 [Nomascus
leucogenys]
Length = 436
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 107/179 (59%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 198 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 254
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR----RDPDAPSV----LPAGE 326
Q+TI RFE+L LS LKP+L+ WL +AE + + +PS+ LP G
Sbjct: 255 QTTISRFEALNLSSRTCCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 313
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 314 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 372
>gi|167598246|gb|ABZ88148.1| pit-1c [Acanthopagrus schlegelii]
Length = 311
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/291 (36%), Positives = 139/291 (47%), Gaps = 46/291 (15%)
Query: 126 GALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPN----PHQLH 181
G P S H+ TP Q ++ M EML + S L P PN P+ L
Sbjct: 9 GNGPTSLHYPVTPCHYSNQQATYGMMAAQEMLSASISQTRILQTCGVPHPNMVSGPNPLQ 68
Query: 182 SS---SMYGPSMNSMMTGHHHHHHHSGALP-------------------ASHHHGATHHP 219
S +Y + + +G H +LP A + P
Sbjct: 69 GSLTPCLYKFPDHGLSSGSCALSHGFSSLPSAFLSTDEAPGGPSIGEVKADAQRKSVRDP 128
Query: 220 VMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTIC 279
P + P RELE FA FK RRIKLG TQ +VG+ALA + SQ+TIC
Sbjct: 129 EDAPTMDSPQI----RELEMFANDFKIRRIKLGYTQTNVGEALAAVH---GSEFSQTTIC 181
Query: 280 RFESLTLSHNNMIALKPILQAWLEEAE---AQAKNKRRDPDAPSVLPAGEKKRKR-TSIA 335
RFE+L LS N LK IL WL+EAE A +K + E+KRKR T+I+
Sbjct: 182 RFENLQLSFKNACKLKAILAKWLDEAELAGALYSDK---------IGMNERKRKRRTTIS 232
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
K +LE F + +PS ++IA IA+ L L+K VVRVWFCN+RQ++KR+K
Sbjct: 233 LGAKEALERSFVEKSKPSSQEIARIAKGLHLEKEVVRVWFCNRRQREKRVK 283
>gi|1004293|emb|CAA57306.1| pituitary transcription factor [Sparus aurata]
Length = 371
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 99/156 (63%), Gaps = 16/156 (10%)
Query: 235 RELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIAL 294
RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS N L
Sbjct: 200 RELEMFANDFKIRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACTL 256
Query: 295 KPILQAWLEEAE---AQAKNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQP 350
K IL WL+EAE A +K + E+KRKR T+I+ K +LE F +
Sbjct: 257 KAILAKWLDEAELAGALYSDK---------IGMNERKRKRRTTISLGAKEALERSFVEKS 307
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+PS ++IA IA+ L L+K VVRVWFCN+RQ++KR+K
Sbjct: 308 KPSSQEIARIAKGLHLEKEVVRVWFCNRRQREKRVK 343
>gi|293612402|gb|ADE48616.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE F + KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFTKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|293612346|gb|ADE48593.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173156|gb|ADW77355.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173163|gb|ADW77358.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173225|gb|ADW77387.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173289|gb|ADW77418.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173299|gb|ADW77423.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 128/233 (54%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EE + +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEETD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
>gi|293612242|gb|ADE48549.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 127/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG QADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYAQADVGLTLGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|450195|gb|AAA85032.1| POU domain protein, partial [Xenopus laevis]
Length = 236
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 99/153 (64%), Gaps = 6/153 (3%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIAL 294
E+E FA+ K +RI +G TQADVG AL L G SQ+TICRFESL LS NM L
Sbjct: 81 EMEQFAKDLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKL 136
Query: 295 KPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
KP+L++WL E E +N + ++P +K++ RTSI + +LE YF +PS
Sbjct: 137 KPLLRSWLHEVENN-ENLQEIISRGQIIPQVQKRKHRTSIEDNVRHTLENYFMQCSKPSA 195
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF 387
++IA IA +L+++K+VVRVWFCN+RQK KR +
Sbjct: 196 QEIAQIARELNMEKDVVRVWFCNRRQKGKRQVY 228
>gi|321173071|gb|ADW77319.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 127/233 (54%), Gaps = 28/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++ Y GP + + +G S+ GA+ P + PG
Sbjct: 62 PCPPPYEFCGGMAYCGPQVGVGLVPQGGLETSQPEGEAGVGVESNSDGASPEPCTVTPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGAL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ ++I+ A++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPTLQQISHTAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|321173395|gb|ADW77467.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173415|gb|ADW77476.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173417|gb|ADW77477.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 128/233 (54%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA +L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIENRVRGNLENLFLQCPKPT-LQISHIALQLGLEKDVVRVWFCNRRQKGKR 286
>gi|293612229|gb|ADE48543.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 107/164 (65%), Gaps = 12/164 (7%)
Query: 226 QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG-ALSQSTICR 280
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G SQ+TICR
Sbjct: 131 QNPEESQDIKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVL----FGKVFSQTTICR 186
Query: 281 FESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKR 340
FE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRTSI +
Sbjct: 187 FEALQLSFKNMCKLRPLLQKWVEEADNN-ENLQEICKAETLVQA--RKRKRTSIENRVRG 243
Query: 341 SLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
+LE F P+P+ ++I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 244 NLENLFLQCPKPTLQQISHIAQQLGLEKDVVRVWFCNRRQKGKR 287
>gi|321173450|gb|ADW77493.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173469|gb|ADW77501.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173479|gb|ADW77506.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 128/233 (54%), Gaps = 29/233 (12%)
Query: 173 PTPNPHQLHSSSMY-GPSMNSMMTGH-----HHHHHHSGALPASHHHGATHHPV-MPPGL 225
P P P++L Y GP + + +G S+ +GA+ P +PPG
Sbjct: 62 PCPPPYELCGGMAYCGPQVGVGLVPQGGLETSQPESEAGVGVESNSNGASPEPCTVPPGA 121
Query: 226 ---------QHPDTDTD----PRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVG- 271
Q+P+ D +ELE FA+ KQ+RI LG TQADVG L L G
Sbjct: 122 VKLEKEKLEQNPEKSQDIKALQKELEQFAKLLKQKRITLGYTQADVGLILGVL----FGK 177
Query: 272 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 331
SQ TICRFE+L LS NM L+P+LQ W EEA+ +N + A +++ A +KRKR
Sbjct: 178 VFSQKTICRFEALQLSFKNMCKLRPLLQKWEEEAD-NNENLQEICKAETLMQA--RKRKR 234
Query: 332 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
TSI + +LE F P+P+ +I+ IA++L L+K+VVRVWFCN+RQK KR
Sbjct: 235 TSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVVRVWFCNRRQKGKR 286
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.128 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,595,029,395
Number of Sequences: 23463169
Number of extensions: 288906014
Number of successful extensions: 1685228
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5151
Number of HSP's successfully gapped in prelim test: 5381
Number of HSP's that attempted gapping in prelim test: 1563938
Number of HSP's gapped (non-prelim): 65708
length of query: 391
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 247
effective length of database: 8,980,499,031
effective search space: 2218183260657
effective search space used: 2218183260657
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)