BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17897
(391 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24350|IPOU_DROME Inhibitory POU protein OS=Drosophila melanogaster GN=acj6 PE=1 SV=3
Length = 396
Score = 365 bits (938), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/275 (72%), Positives = 211/275 (76%), Gaps = 23/275 (8%)
Query: 121 HHHHSGALPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDP--TPNPH 178
+HHHS + P P F + HH MD L+MLD + SMTTL P+S+ TP
Sbjct: 117 YHHHSMSGPPQRPLQENP----FSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQ 171
Query: 179 QLHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHH----GATHHPVMPPGLQ----HPDT 230
LH S SMN MM+ HHH G L A HHPV+ + HPDT
Sbjct: 172 HLHGSYH---SMNHMMS-----HHHPGTLSGHTGGHHGHSAVHHPVITAAVAAAGLHPDT 223
Query: 231 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 290
DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN
Sbjct: 224 DTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNN 283
Query: 291 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 350
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 284 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 343
Query: 351 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR+
Sbjct: 344 RPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRI 378
Score = 85.9 bits (211), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/139 (46%), Positives = 81/139 (58%), Gaps = 26/139 (18%)
Query: 2 TVRRYALLFSGLNDGLLSRAEALAAVDIGKHSA----SSTPTLPTLKHDMMYHHGMNGTH 57
+ R+ +F+G+NDG+LSRAEALAAVDI KH A S P+ +KHD+MYHH +
Sbjct: 68 SARQNGDIFAGINDGILSRAEALAAVDIQKHQAQHVHSQMPS--QIKHDVMYHH---HSM 122
Query: 58 GGPNGRPHQMS------HHGMDGLEMLDSISSSMTTLTPMSDP--TPNPHQLHSSSMYGP 109
GP RP Q + HH MD L+MLD + SMTTL P+S+ TP LH S
Sbjct: 123 SGPPQRPLQENPFSRQMHHSMDQLDMLDP-TGSMTTLAPISESPLTPTHQHLHGSYH--- 178
Query: 110 SMNSMMTGHHHHHHHSGAL 128
SMN MM+ HHH G L
Sbjct: 179 SMNHMMS-----HHHPGTL 192
>sp|Q91998|BRN3_CHICK Brain-specific homeobox/POU domain protein 3 OS=Gallus gallus
GN=BRN3 PE=2 SV=1
Length = 341
Score = 295 bits (756), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/200 (73%), Positives = 163/200 (81%), Gaps = 7/200 (3%)
Query: 192 SMMTGHHHHHHHSGALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKL 251
S M+ +H HHS + SH HG H V + P+T+TDPRELE+FAERFKQRRIKL
Sbjct: 149 SHMSAINHMAHHSQPMNMSHPHGLASHAV----ISGPETETDPRELESFAERFKQRRIKL 204
Query: 252 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 311
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 205 GVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE---RA 261
Query: 312 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
+R P + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 262 QREKMTKPEIYTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 321
Query: 372 RVWFCNQRQKQKRMKFAAQH 391
RVWFCNQRQKQKRMKF+A +
Sbjct: 322 RVWFCNQRQKQKRMKFSATY 341
>sp|Q01851|PO4F1_HUMAN POU domain, class 4, transcription factor 1 OS=Homo sapiens
GN=POU4F1 PE=2 SV=4
Length = 419
Score = 290 bits (742), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 260 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 319
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 320 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 376
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 377 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 419
>sp|P17208|PO4F1_MOUSE POU domain, class 4, transcription factor 1 OS=Mus musculus
GN=Pou4f1 PE=2 SV=3
Length = 421
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 3/163 (1%)
Query: 229 DTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSH 288
D+DTDPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSH
Sbjct: 262 DSDTDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSH 321
Query: 289 NNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAV 348
NNMIALKPILQAWLEEAE + K P+ + GEKKRKRTSIAAPEKRSLEAYFAV
Sbjct: 322 NNMIALKPILQAWLEEAEGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAV 378
Query: 349 QPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAAQH 391
QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKF+A +
Sbjct: 379 QPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFSATY 421
>sp|Q63955|PO4F3_MOUSE POU domain, class 4, transcription factor 3 OS=Mus musculus
GN=Pou4f3 PE=2 SV=2
Length = 338
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHAVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>sp|Q15319|PO4F3_HUMAN POU domain, class 4, transcription factor 3 OS=Homo sapiens
GN=POU4F3 PE=1 SV=1
Length = 338
Score = 290 bits (741), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/250 (62%), Positives = 178/250 (71%), Gaps = 29/250 (11%)
Query: 148 HHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG-- 205
H G++G ++L+ IS ++ S S G +S+M H HH
Sbjct: 112 HQGLEG-DLLEHISPTL-----------------SVSGLGAPEHSVMPAQIHPHHLGAMG 153
Query: 206 ----ALPASHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
A+ SH H H MP L D ++DPRELEAFAERFKQRRIKLGVTQADVG A
Sbjct: 154 HLHQAMGMSHPHTVAPHSAMPACLS--DVESDPRELEAFAERFKQRRIKLGVTQADVGAA 211
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K P+ +
Sbjct: 212 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNSKPE---L 268
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 269 FNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 328
Query: 382 QKRMKFAAQH 391
QKRMK++A H
Sbjct: 329 QKRMKYSAVH 338
>sp|Q90435|PO4F3_DANRE POU domain, class 4, transcription factor 3 OS=Danio rerio
GN=pou4f3 PE=2 SV=2
Length = 331
Score = 287 bits (735), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 155/242 (64%), Positives = 173/242 (71%), Gaps = 27/242 (11%)
Query: 155 EMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHS-----GALPA 209
++LD ISSS++ S M P S+MT H HH A+
Sbjct: 112 DLLDHISSSLSV----------------SGMGAPPDPSVMTTQAHQHHLQMGHLHQAMAM 155
Query: 210 SHHHGATHHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPG 269
H H + H M D ++DPRELEAFAERFKQRRIKLGVTQADVG ALANLK+PG
Sbjct: 156 GHPHTLSVHNGMACV---NDVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPG 212
Query: 270 VGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKR 329
VG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K PD + E+KR
Sbjct: 213 VGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNGKPD---LFNGNERKR 269
Query: 330 KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
KRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 270 KRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 329
Query: 390 QH 391
H
Sbjct: 330 VH 331
>sp|Q63934|PO4F2_MOUSE POU domain, class 4, transcription factor 2 OS=Mus musculus
GN=Pou4f2 PE=2 SV=1
Length = 411
Score = 285 bits (728), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 149/213 (69%), Positives = 161/213 (75%), Gaps = 16/213 (7%)
Query: 184 SMYGPSMNSMMTGHHHHHH------HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRE 236
+M GP + T H H H AL +H HG +H M D D DPR+
Sbjct: 206 AMAGPDGTVVSTPAHAPHMATMNPMHQAALSMAHAHGLPSHMGCMS------DVDADPRD 259
Query: 237 LEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKP 296
LEAFAERFKQRRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP
Sbjct: 260 LEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKP 319
Query: 297 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 356
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 320 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 376
Query: 357 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
IAAIAEKLDLKKNVVRVWFCNQRQKQKRMK++A
Sbjct: 377 IAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSA 409
>sp|Q12837|PO4F2_HUMAN POU domain, class 4, transcription factor 2 OS=Homo sapiens
GN=POU4F2 PE=1 SV=2
Length = 409
Score = 284 bits (727), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 143/188 (76%), Positives = 153/188 (81%), Gaps = 10/188 (5%)
Query: 203 HSGALPASHHHGA-THHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKA 261
H AL +H HG +H M D D DPR+LEAFAERFKQRRIKLGVTQADVG A
Sbjct: 229 HQAALSMAHAHGLPSHMGCMS------DVDADPRDLEAFAERFKQRRIKLGVTQADVGSA 282
Query: 262 LANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSV 321
LANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P +
Sbjct: 283 LANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPEL 339
Query: 322 LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQK 381
EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVRVWFCNQRQK
Sbjct: 340 FNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQK 399
Query: 382 QKRMKFAA 389
QKRMK++A
Sbjct: 400 QKRMKYSA 407
>sp|P13528|UNC86_CAEEL Transcription factor unc-86 OS=Caenorhabditis elegans GN=unc-86
PE=2 SV=1
Length = 467
Score = 259 bits (662), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 124/168 (73%), Positives = 140/168 (83%), Gaps = 3/168 (1%)
Query: 217 HHPVMPPGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQS 276
+P+ PP D DTDPR+LE FAE FKQRRIKLGVTQADVGKALA+LK+PGVG+LSQS
Sbjct: 256 RYPIAPPT---SDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQS 312
Query: 277 TICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAA 336
TICRFESLTLSHNNM+ALKPIL +WLE+AE K K D +LP +KKRKRTSIAA
Sbjct: 313 TICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAA 372
Query: 337 PEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR 384
PEKR LE +F QPRPSGE+IA+IA++LDLKKNVVRVWFCNQRQKQKR
Sbjct: 373 PEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR 420
>sp|P20266|PO4F1_RAT POU domain, class 4, transcription factor 1 (Fragment) OS=Rattus
norvegicus GN=Pou4f1 PE=2 SV=2
Length = 128
Score = 224 bits (572), Expect = 6e-58, Method: Composition-based stats.
Identities = 111/131 (84%), Positives = 116/131 (88%), Gaps = 3/131 (2%)
Query: 247 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 306
RRIKLGVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 1 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 60
Query: 307 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 366
+ K + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 61 GAQREKM---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 117
Query: 367 KKNVVRVWFCN 377
KKNVVRVWFCN
Sbjct: 118 KKNVVRVWFCN 128
>sp|P55968|PO4F1_CHICK POU domain, class 4, transcription factor 1 (Fragment) OS=Gallus
gallus GN=POU4F1 PE=3 SV=1
Length = 116
Score = 190 bits (482), Expect = 2e-47, Method: Composition-based stats.
Identities = 99/119 (83%), Positives = 104/119 (87%), Gaps = 3/119 (2%)
Query: 253 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 312
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREK 60
Query: 313 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 371
+ P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 61 M---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 116
>sp|P16241|CF1A_DROME POU domain protein CF1A OS=Drosophila melanogaster GN=vvl PE=2 SV=5
Length = 427
Score = 165 bits (417), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/150 (53%), Positives = 103/150 (68%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 219 DLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 275
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+LQ WLEEA++ + + G K++KRTSI K +LE +F QP+PS +
Sbjct: 276 PLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQ 332
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 333 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 362
>sp|Q17237|SGF3_BOMMO Silk gland factor 3 OS=Bombyx mori GN=SGF3 PE=2 SV=1
Length = 351
Score = 161 bits (408), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/159 (52%), Positives = 107/159 (67%), Gaps = 7/159 (4%)
Query: 228 PDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTL 286
P+ DT +LEAFA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L L
Sbjct: 147 PEEDTPTSDDLEAFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQL 203
Query: 287 SHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 346
S NM LKP+LQ WLEEA++ + + G K++KRTSI K +LE +F
Sbjct: 204 SFKNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHF 260
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
QP+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 261 HKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 299
>sp|P70030|P3F2B_XENLA POU domain, class 3, transcription factor 2-B OS=Xenopus laevis
GN=pou3f2-b PE=2 SV=1
Length = 385
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 109/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 201 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 257
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 258 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 313
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+P+ ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 314 HFLKCPKPAAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 354
>sp|P56224|P3F3A_DANRE POU domain, class 3, transcription factor 3-A OS=Danio rerio
GN=pou3f3a PE=2 SV=2
Length = 438
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 239 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 295
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 296 LSFKNMCKLKPLLNKWLEEADSTTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 351
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 352 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 392
>sp|P79745|P3F3B_DANRE POU domain, class 3, transcription factor 3-B OS=Danio rerio
GN=pou3f3b PE=1 SV=1
Length = 443
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 235 HSDEDTPTSDDLEHFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 291
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 292 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 347
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 348 HFLKCPKPSAQEITSLADNLQLEKEVVRVWFCNRRQKEKRM 388
>sp|P31365|P3F2A_XENLA POU domain, class 3, transcription factor 2-A OS=Xenopus laevis
GN=pou3f2-a PE=2 SV=2
Length = 382
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 108/161 (67%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 198 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 254
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + + P + + A G K++KRTSI K +LE+
Sbjct: 255 LSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 310
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 311 HFLKCPKPSAPEITSLADSLQLEKEVVRVWFCNRRQKEKRM 351
>sp|P31360|PO3F2_MOUSE POU domain, class 3, transcription factor 2 OS=Mus musculus
GN=Pou3f2 PE=2 SV=1
Length = 445
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 261 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 317
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 318 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 374
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 375 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414
>sp|P20265|PO3F2_HUMAN POU domain, class 3, transcription factor 2 OS=Homo sapiens
GN=POU3F2 PE=1 SV=4
Length = 443
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 259 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 315
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 316 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESH 372
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 373 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 412
>sp|P56222|PO3F2_RAT POU domain, class 3, transcription factor 2 OS=Rattus norvegicus
GN=Pou3f2 PE=2 SV=1
Length = 445
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 261 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 317
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEEA++ + + + G K++KRTSI K +LE++
Sbjct: 318 LSFKNMCKLKPLLNKWLEEADSSSGSPT---SIDKIASQGRKRKKRTSIEVSVKGALESH 374
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS ++I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 375 FLKCPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRM 414
>sp|P20264|PO3F3_HUMAN POU domain, class 3, transcription factor 3 OS=Homo sapiens
GN=POU3F3 PE=2 SV=2
Length = 500
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 311 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 367
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 368 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 423
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 424 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 464
>sp|P31361|PO3F3_MOUSE POU domain, class 3, transcription factor 3 OS=Mus musculus
GN=Pou3f3 PE=2 SV=2
Length = 497
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 308 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 364
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 365 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 420
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 421 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 461
>sp|Q63262|PO3F3_RAT POU domain, class 3, transcription factor 3 OS=Rattus norvegicus
GN=Pou3f3 PE=1 SV=2
Length = 497
Score = 158 bits (399), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/161 (51%), Positives = 107/161 (66%), Gaps = 9/161 (5%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D DT +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 308 HSDEDTPTSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 364
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEEA++ + P + + A G K++KRTSI K +LE+
Sbjct: 365 LSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALES 420
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+F P+PS ++I +A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 421 HFLKCPKPSAQEITNLADSLQLEKEVVRVWFCNRRQKEKRM 461
>sp|P42571|PO2F3_RAT POU domain, class 2, transcription factor 3 OS=Rattus norvegicus
GN=Pou2f3 PE=2 SV=1
Length = 430
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 108/170 (63%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 170 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 226
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL +AE+ DP A PS P G K++KRTSI
Sbjct: 227 ALNLSFKNMCKLKPLLEKWLNDAESSPA----DPSASTPSSYPTLSEVFGRKRKKRTSIE 282
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>sp|A1L0Z1|PO3F4_XENTR POU domain, class 3, transcription factor 4 OS=Xenopus tropicalis
GN=pou3f4 PE=2 SV=1
Length = 360
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 192 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQATICRFEALQLSFKNMCKLK 248
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 249 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 305
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 306 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 335
>sp|P31364|P3F4A_XENLA POU domain, class 3, transcription factor 4-A OS=Xenopus laevis
GN=pou3f4-a PE=2 SV=2
Length = 361
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/150 (52%), Positives = 98/150 (65%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ N + G K++KRTSI K LE +F P+P+
Sbjct: 250 PLLNKWLEEADSSTGNPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAL 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EITSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>sp|P62516|PO3F4_RAT POU domain, class 3, transcription factor 4 OS=Rattus norvegicus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>sp|P62515|PO3F4_MOUSE POU domain, class 3, transcription factor 4 OS=Mus musculus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>sp|P31363|P3F1A_XENLA POU domain, class 3, transcription factor 1-A OS=Xenopus laevis
GN=pou3f1-a PE=2 SV=2
Length = 375
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/228 (43%), Positives = 128/228 (56%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG 224
L PMS P+ N HQ ++S S Y ++N M+ HHS P G V P
Sbjct: 125 LAPMS-PSSNSHQPLIYSQSSYT-NLNGMLGPQASSLHHSMRDPLHDDPGVHDTQVDSPP 182
Query: 225 L------QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 183 QHLGHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 239
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ + + + G K++KRTSI
Sbjct: 240 ICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVG 296
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 297 VKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 344
>sp|Q812B1|PO3F4_MESAU POU domain, class 3, transcription factor 4 OS=Mesocricetus auratus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 100/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>sp|P79746|PO3F2_DANRE POU domain, class 3, transcription factor 2 OS=Danio rerio
GN=pou3f2 PE=1 SV=1
Length = 378
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 104/151 (68%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 207 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 263
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSG 354
P+L WLEEA++ + + P + + A G K++KRTSI K +LE++F P+P+
Sbjct: 264 PLLNKWLEEADSTSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAA 319
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 320 SEITSLADSLQLEKEVVRVWFCNRRQKEKRM 350
>sp|P49335|PO3F4_HUMAN POU domain, class 3, transcription factor 4 OS=Homo sapiens
GN=POU3F4 PE=1 SV=2
Length = 361
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 99/150 (66%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE L LS NM LK
Sbjct: 193 ELEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEGLQLSFKNMCKLK 249
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+ +
Sbjct: 250 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQ 306
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 307 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 336
>sp|Q4QQQ7|PO3F1_XENTR POU domain, class 3, transcription factor 1 OS=Xenopus tropicalis
GN=pou3f1 PE=2 SV=1
Length = 375
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 129/228 (56%), Gaps = 17/228 (7%)
Query: 167 LTPMSDPTPNPHQ--LHSSSMYGPSMNSMMTGHHHHHHHSGALPASHHHGA--THHPVMP 222
L PMS P N HQ ++S S Y ++N M+ HHS P G TH P
Sbjct: 125 LPPMS-PGSNSHQPLIYSQSSYT-NLNGMLGPQASSLHHSMRDPLHDDPGVLDTHVESPP 182
Query: 223 PGLQHPDTDTDPR-----ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQST 277
L H +D +LE FA++FKQRRIKLG TQADVG AL L SQ+T
Sbjct: 183 QHLSHHQDHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTT 239
Query: 278 ICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAP 337
ICRFE+L LS NM LKP+L WLEE ++ + + + G K++KRTSI
Sbjct: 240 ICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVG 296
Query: 338 EKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
K +LE +F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 297 VKGALENHFLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 344
>sp|P20267|PO3F1_RAT POU domain, class 3, transcription factor 1 OS=Rattus norvegicus
GN=Pou3f1 PE=2 SV=2
Length = 451
Score = 154 bits (390), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>sp|Q561L5|P3F1B_XENLA POU domain, class 3, transcription factor 1-B OS=Xenopus laevis
GN=pou3f1-b PE=2 SV=1
Length = 375
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 102/160 (63%), Gaps = 7/160 (4%)
Query: 227 HPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLT 285
H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 191 HSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQ 247
Query: 286 LSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAY 345
LS NM LKP+L WLEE ++ + + + G K++KRTSI K +LE +
Sbjct: 248 LSFKNMCKLKPLLNKWLEETDSTTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENH 304
Query: 346 FAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
F P+PS +I ++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 305 FLKCPKPSAHEITSLADSLQLEKEVVRVWFCNRRQKEKRM 344
>sp|Q9UKI9|PO2F3_HUMAN POU domain, class 2, transcription factor 3 OS=Homo sapiens
GN=POU2F3 PE=2 SV=3
Length = 436
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 121/212 (57%), Gaps = 27/212 (12%)
Query: 187 GPSMNSMMTGHHHHHHHSGALPAS----HHHGATHHPVMP--PGLQHPDTDTDPRELEAF 240
GP + S GH LP S H + H PV P D +D ELE F
Sbjct: 142 GPGLASQAFGHP-------GLPGSSLEPHLEASQHLPVPKHLPSSGGADEPSDLEELEKF 194
Query: 241 AERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQA 300
A+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+
Sbjct: 195 AKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEK 251
Query: 301 WLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 353
WL +AE+ DP PS P+ G K++KRTSI + +LE F P+PS
Sbjct: 252 WLNDAESSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPS 307
Query: 354 GEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 308 SEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 339
>sp|P21952|PO3F1_MOUSE POU domain, class 3, transcription factor 1 OS=Mus musculus
GN=Pou3f1 PE=1 SV=1
Length = 449
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 241 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 297
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 298 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 354
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 355 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 399
>sp|P31362|PO2F3_MOUSE POU domain, class 2, transcription factor 3 OS=Mus musculus
GN=Pou2f3 PE=2 SV=2
Length = 431
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 107/170 (62%), Gaps = 14/170 (8%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
PG D TD ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 170 PGPGGNDEPTDLEELEKFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 226
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIA 335
+L LS NM LKP+L+ WL + E+ DP A PS P G K++KRTSI
Sbjct: 227 ALNLSFKNMCKLKPLLEKWLNDPESSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIE 282
Query: 336 APEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F P+PS E+I+ IAE+L ++K VVRVWFCN+RQK+KR+
Sbjct: 283 TNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVRVWFCNRRQKEKRI 332
>sp|Q03052|PO3F1_HUMAN POU domain, class 3, transcription factor 1 OS=Homo sapiens
GN=POU3F1 PE=2 SV=3
Length = 451
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 226 QHPDTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESL 284
+H D D +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L
Sbjct: 243 EHSDEDAPSSDDLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEAL 299
Query: 285 TLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEA 344
LS NM LKP+L WLEE ++ + + + + G K++KRTSI K +LE+
Sbjct: 300 QLSFKNMCKLKPLLNKWLEETDSSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALES 356
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKFAA 389
+F P+PS +I +A+ L L+K VVRVWFCN+RQK+KRM AA
Sbjct: 357 HFLKCPKPSAHEITGLADSLQLEKEVVRVWFCNRRQKEKRMTPAA 401
>sp|Q90482|PO3F1_DANRE POU domain, class 3, transcription factor 1 OS=Danio rerio
GN=pou3f1 PE=2 SV=1
Length = 368
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 97/150 (64%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 194 DLEQFAKQFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 250
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEE ++ N + + G K++KRTSI K +LE +F P+PS
Sbjct: 251 PLLNKWLEETDS---NTGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAH 307
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I +A L L+K VVRVWFCN+RQK+KRM
Sbjct: 308 EITTLAGTLQLEKEVVRVWFCNRRQKEKRM 337
>sp|Q6DJN3|P3F4B_XENLA POU domain, class 3, transcription factor 4-B OS=Xenopus laevis
GN=pou3f4-b PE=2 SV=1
Length = 356
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/150 (51%), Positives = 98/150 (65%), Gaps = 6/150 (4%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
ELE FA+ FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM LK
Sbjct: 188 ELEQFAKLFKQRRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLK 244
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGE 355
P+L WLEEA++ + + G K++KRTSI K LE +F P+P+
Sbjct: 245 PLLNKWLEEADSSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAL 301
Query: 356 KIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+I+++A+ L L+K VVRVWFCN+RQK+KRM
Sbjct: 302 EISSLADSLQLEKEVVRVWFCNRRQKEKRM 331
>sp|P31370|POU1_DUGJA POU domain protein 1 OS=Dugesia japonica GN=POU1 PE=2 SV=1
Length = 559
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 102/151 (67%), Gaps = 8/151 (5%)
Query: 236 ELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALK 295
+LE FA+ FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM L+
Sbjct: 266 DLEQFAKMFKQRRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLR 322
Query: 296 PILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSG 354
P+LQ WL EA++ +++ P + A +KRK RTSI A K LE+ F +PS
Sbjct: 323 PLLQKWLHEADSSSES----PTNFDKISAQSRKRKKRTSIEANVKSILESSFMKLSKPSA 378
Query: 355 EKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ I+++AEKL L+K VVRVWFCN+RQK+KR+
Sbjct: 379 QDISSLAEKLSLEKEVVRVWFCNRRQKEKRI 409
>sp|P20268|HM06_CAEEL Homeobox protein ceh-6 OS=Caenorhabditis elegans GN=ceh-6 PE=2 SV=3
Length = 380
Score = 148 bits (374), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
Query: 232 TDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNM 291
T P +LE FA++FKQRRIKLG TQADVG AL L SQ+TICRFE+L LS NM
Sbjct: 190 TCPDDLEGFAKQFKQRRIKLGYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNM 246
Query: 292 IALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPR 351
LKP+L WLEEA++ + + + AG K++KRTSI K LE +F +
Sbjct: 247 CKLKPLLFKWLEEADSTTGSPNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQSNQK 305
Query: 352 PSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
P+ ++I +A +L L+K VVRVWFCN+RQK+KR+
Sbjct: 306 PNAQEITQVAMELQLEKEVVRVWFCNRRQKEKRI 339
>sp|Q28503|PIT1_MACMU Pituitary-specific positive transcription factor 1 OS=Macaca
mulatta GN=POU1F1 PE=2 SV=2
Length = 291
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTLVFYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
>sp|P14859|PO2F1_HUMAN POU domain, class 2, transcription factor 1 OS=Homo sapiens
GN=POU2F1 PE=1 SV=2
Length = 743
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 105/167 (62%), Gaps = 10/167 (5%)
Query: 223 PGLQHPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFE 282
P L+ P +D ELE FA+ FKQRRIKLG TQ DVG A+ KL G SQ+TI RFE
Sbjct: 277 PSLEEP---SDLEELEQFAKTFKQRRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFE 330
Query: 283 SLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE----KKRKRTSIAAPE 338
+L LS NM LKP+L+ WL +AE + + + P E +++KRTSI
Sbjct: 331 ALNLSFKNMCKLKPLLEKWLNDAENLSSDSSLSSPSALNSPGIEGLSRRRKKRTSIETNI 390
Query: 339 KRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+ +LE F +P+ E+I IA++L+++K V+RVWFCN+RQK+KR+
Sbjct: 391 RVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRI 437
>sp|P09086|PO2F2_HUMAN POU domain, class 2, transcription factor 2 OS=Homo sapiens
GN=POU2F2 PE=1 SV=3
Length = 479
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/179 (45%), Positives = 111/179 (62%), Gaps = 15/179 (8%)
Query: 218 HPVMPPGLQ---HPDTDTDPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALS 274
HP P L+ HP+ +D ELE FA FKQRRIKLG TQ DVG A+ L S
Sbjct: 181 HPQPPKCLEPPSHPEEPSDLEELEQFARTFKQRRIKLGFTQGDVGLAMGKLY---GNDFS 237
Query: 275 QSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR-RDPD---APSV----LPAGE 326
Q+TI RFE+L LS NM LKP+L+ WL +AE + + P+ +PS+ LP G
Sbjct: 238 QTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVDSSLPSPNQLSSPSLGFDGLP-GR 296
Query: 327 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM 385
+++KRTSI + +LE F +P+ E+I IAE+L ++K V+RVWFCN+RQK+KR+
Sbjct: 297 RRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQLHMEKEVIRVWFCNRRQKEKRI 355
>sp|P79364|PIT1_SHEEP Pituitary-specific positive transcription factor 1 OS=Ovis aries
GN=POU1F1 PE=2 SV=1
Length = 291
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 148/280 (52%), Gaps = 40/280 (14%)
Query: 128 LPASHHHVATPSLLLFPQMSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYG 187
+P + AT L++ P + L + + ++ M+T T + P+ H + SS YG
Sbjct: 13 IPLNSESSATLPLIMHPS----AAECLPVSNHATNVMSTATGLHYSVPSCHYGNQSSTYG 68
Query: 188 PSMNSMMTGHHHHHHHSGALPASHHHGATHHPVMPPG----------------LQHP-DT 230
S+ + H+ SH H P++ ++ P D
Sbjct: 69 VMAGSLTPCLYEFPDHT----LSHGFPPMHQPLLSEDPTAADFKQELRRKSKLIEEPIDM 124
Query: 231 DT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHN 289
D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 125 DSPEIRELEKFANEFKVRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFK 181
Query: 290 NMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYF 346
N LK IL WLEEAE N++ + A E+KRKR T+I+ K +LE +F
Sbjct: 182 NACKLKAILFKWLEEAEQVGALYNEK--------VGANERKRKRRTTISIAAKDALERHF 233
Query: 347 AVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
Q +PS ++I +AE+L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 234 GEQNKPSSQEILRMAEELNLEKEVVRVWFCNRRQREKRVK 273
>sp|Q9YGL7|PIT1_CHICK Pituitary-specific positive transcription factor 1 OS=Gallus gallus
GN=POU1F1 PE=2 SV=1
Length = 363
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 104/162 (64%), Gaps = 15/162 (9%)
Query: 229 DTDT-DPRELEAFAERFKQRRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLS 287
D D+ + RELE FA FK RRIKLG TQ +VG+ALA + SQ+TICRFE+L LS
Sbjct: 194 DMDSPEIRELEKFANEFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLS 250
Query: 288 HNNMIALKPILQAWLEEAEAQAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEA 344
N LK IL WLEEAE N++ + E+KRKR T+I+ K +LE
Sbjct: 251 FKNACKLKSILSKWLEEAEQVGALYNEK--------VGVNERKRKRRTTISISAKEALER 302
Query: 345 YFAVQPRPSGEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMK 386
+F Q +PS ++I +AE L+L+K VVRVWFCN+RQ++KR+K
Sbjct: 303 HFGEQSKPSSQEIMRMAEGLNLEKEVVRVWFCNRRQREKRVK 344
>sp|P28069|PIT1_HUMAN Pituitary-specific positive transcription factor 1 OS=Homo sapiens
GN=POU1F1 PE=1 SV=1
Length = 291
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/262 (37%), Positives = 140/262 (53%), Gaps = 36/262 (13%)
Query: 146 MSHHGMDGLEMLDSISSSMTTLTPMSDPTPNPHQLHSSSMYGPSMNSMMTGHHHHHHHSG 205
M H + L + + ++ M+T T + P+ H + S YG S+ + H+
Sbjct: 27 MHHSAAECLPVSNHATNVMSTATGLHYSVPSCHYGNQPSTYGVMAGSLTPCLYKFPDHT- 85
Query: 206 ALPASHHHGATHHPVMPPG----------------LQHP-DTDT-DPRELEAFAERFKQR 247
SH H P++ ++ P D D+ + RELE FA FK R
Sbjct: 86 ---LSHGFPPIHQPLLAEDPTAADFKQELRRKSKLVEEPIDMDSPEIRELEKFANEFKVR 142
Query: 248 RIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA 307
RIKLG TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 143 RIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQ 199
Query: 308 QAK--NKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 364
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L
Sbjct: 200 VGALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEEL 251
Query: 365 DLKKNVVRVWFCNQRQKQKRMK 386
+L+K VVRVWFCN+RQ++KR+K
Sbjct: 252 NLEKEVVRVWFCNRRQREKRVK 273
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.128 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,579,693
Number of Sequences: 539616
Number of extensions: 6771953
Number of successful extensions: 39557
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 419
Number of HSP's that attempted gapping in prelim test: 30198
Number of HSP's gapped (non-prelim): 5035
length of query: 391
length of database: 191,569,459
effective HSP length: 119
effective length of query: 272
effective length of database: 127,355,155
effective search space: 34640602160
effective search space used: 34640602160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)