BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17899
(145 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328713589|ref|XP_001950003.2| PREDICTED: inhibitory POU protein-like [Acyrthosiphon pisum]
Length = 424
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 280 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 339
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 340 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 399
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 400 KKNVVR 405
>gi|195060344|ref|XP_001995785.1| GH17948 [Drosophila grimshawi]
gi|193896571|gb|EDV95437.1| GH17948 [Drosophila grimshawi]
Length = 320
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 164 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 223
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 224 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 283
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 284 KKNVVR 289
>gi|242017557|ref|XP_002429254.1| Inhibitory POU protein, putative [Pediculus humanus corporis]
gi|212514150|gb|EEB16516.1| Inhibitory POU protein, putative [Pediculus humanus corporis]
Length = 296
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 152 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 211
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 212 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 271
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 272 KKNVVR 277
>gi|198470029|ref|XP_002134478.1| GA26624 [Drosophila pseudoobscura pseudoobscura]
gi|198147148|gb|EDY73105.1| GA26624 [Drosophila pseudoobscura pseudoobscura]
Length = 294
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/126 (97%), Positives = 124/126 (98%), Gaps = 1/126 (0%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R+ F GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 139 RINF-GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 197
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 198 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 257
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 258 KKNVVR 263
>gi|386764469|ref|NP_001245686.1| abnormal chemosensory jump 6, isoform K [Drosophila melanogaster]
gi|383293412|gb|AFH07400.1| abnormal chemosensory jump 6, isoform K [Drosophila melanogaster]
Length = 370
Score = 247 bits (630), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 214 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 273
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 274 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 333
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 334 KKNVVR 339
>gi|386764467|ref|NP_001245685.1| abnormal chemosensory jump 6, isoform J [Drosophila melanogaster]
gi|383293411|gb|AFH07399.1| abnormal chemosensory jump 6, isoform J [Drosophila melanogaster]
Length = 359
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 203 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 262
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 263 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 322
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 323 KKNVVR 328
>gi|386764475|ref|NP_001245689.1| abnormal chemosensory jump 6, isoform N [Drosophila melanogaster]
gi|383293415|gb|AFH07403.1| abnormal chemosensory jump 6, isoform N [Drosophila melanogaster]
Length = 378
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 222 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 281
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 282 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 341
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 342 KKNVVR 347
>gi|386764465|ref|NP_001245684.1| abnormal chemosensory jump 6, isoform I [Drosophila melanogaster]
gi|383293410|gb|AFH07398.1| abnormal chemosensory jump 6, isoform I [Drosophila melanogaster]
Length = 366
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 210 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 269
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 270 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 329
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 330 KKNVVR 335
>gi|17864538|ref|NP_524876.1| abnormal chemosensory jump 6, isoform A [Drosophila melanogaster]
gi|194894619|ref|XP_001978096.1| GG19406 [Drosophila erecta]
gi|97536463|sp|P24350.3|IPOU_DROME RecName: Full=Inhibitory POU protein; Short=I-POU; AltName:
Full=Abnormal chemosensory jump 6 protein
gi|3599515|gb|AAC35369.1| POU domain transcription factor [Drosophila melanogaster]
gi|22833164|gb|AAF48447.2| abnormal chemosensory jump 6, isoform A [Drosophila melanogaster]
gi|190649745|gb|EDV47023.1| GG19406 [Drosophila erecta]
Length = 396
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 240 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 299
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 300 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 359
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 360 KKNVVR 365
>gi|195397527|ref|XP_002057380.1| GJ16375 [Drosophila virilis]
gi|194147147|gb|EDW62866.1| GJ16375 [Drosophila virilis]
Length = 385
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 229 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 288
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 289 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 348
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 349 KKNVVR 354
>gi|194763449|ref|XP_001963845.1| GF21043 [Drosophila ananassae]
gi|190618770|gb|EDV34294.1| GF21043 [Drosophila ananassae]
Length = 330
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN
Sbjct: 179 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 238
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV
Sbjct: 239 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 298
Query: 137 R 137
R
Sbjct: 299 R 299
>gi|195356216|ref|XP_002044576.1| GM25017 [Drosophila sechellia]
gi|194132207|gb|EDW53829.1| GM25017 [Drosophila sechellia]
Length = 258
Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 102 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 161
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 162 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 221
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 222 KKNVVR 227
>gi|195432290|ref|XP_002064156.1| GK20016 [Drosophila willistoni]
gi|194160241|gb|EDW75142.1| GK20016 [Drosophila willistoni]
Length = 264
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 108 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 167
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 168 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 227
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 228 KKNVVR 233
>gi|195566864|ref|XP_002106995.1| GD15807 [Drosophila simulans]
gi|194204392|gb|EDX17968.1| GD15807 [Drosophila simulans]
Length = 266
Score = 246 bits (627), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 110 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 169
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 170 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 229
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 230 KKNVVR 235
>gi|157110244|ref|XP_001651018.1| inhibitory pou [Aedes aegypti]
gi|108878787|gb|EAT43012.1| AAEL005507-PA [Aedes aegypti]
Length = 357
Score = 245 bits (625), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 213 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 272
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 273 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 332
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 333 KKNVVR 338
>gi|307210801|gb|EFN87183.1| Inhibitory POU protein [Harpegnathos saltator]
Length = 283
Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 139 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 198
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 199 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 258
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 259 KKNVVR 264
>gi|380012129|ref|XP_003690140.1| PREDICTED: inhibitory POU protein-like [Apis florea]
Length = 351
Score = 244 bits (624), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 207 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 266
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 267 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 326
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 327 KKNVVR 332
>gi|189235030|ref|XP_972320.2| PREDICTED: similar to RT01016p [Tribolium castaneum]
Length = 353
Score = 244 bits (624), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 209 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 269 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 328
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 329 KKNVVR 334
>gi|322789765|gb|EFZ14931.1| hypothetical protein SINV_13279 [Solenopsis invicta]
Length = 252
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 111 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 170
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 171 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 230
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 231 KKNVVR 236
>gi|270004858|gb|EFA01306.1| abnormal chemosensory jump 6 [Tribolium castaneum]
Length = 365
Score = 244 bits (624), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 221 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 280
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 281 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 340
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 341 KKNVVR 346
>gi|345483076|ref|XP_001605968.2| PREDICTED: inhibitory POU protein-like [Nasonia vitripennis]
Length = 368
Score = 244 bits (623), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 224 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 283
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 284 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 343
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 344 KKNVVR 349
>gi|66526269|ref|XP_394134.2| PREDICTED: inhibitory POU protein [Apis mellifera]
Length = 364
Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 220 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 279
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 280 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 339
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 340 KKNVVR 345
>gi|340722501|ref|XP_003399643.1| PREDICTED: inhibitory POU protein-like [Bombus terrestris]
gi|350418475|ref|XP_003491869.1| PREDICTED: inhibitory POU protein-like [Bombus impatiens]
Length = 364
Score = 244 bits (623), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 220 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 279
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 280 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 339
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 340 KKNVVR 345
>gi|383850098|ref|XP_003700654.1| PREDICTED: inhibitory POU protein-like [Megachile rotundata]
Length = 364
Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 220 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 279
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 280 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 339
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 340 KKNVVR 345
>gi|357622600|gb|EHJ74026.1| inhibitory pou [Danaus plexippus]
Length = 306
Score = 243 bits (620), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 162 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 221
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 222 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 281
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 282 KKNVVR 287
>gi|358350601|dbj|BAL15791.1| abnormal chemosensory jump 6, splice form A, partial [Bombyx mori]
Length = 241
Score = 241 bits (616), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/126 (96%), Positives = 122/126 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 97 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 156
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDL
Sbjct: 157 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDL 216
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 217 KKNVVR 222
>gi|349584655|dbj|BAL03080.1| abnormal chemosensory jump 6, isoform D [Bombyx mori]
Length = 336
Score = 241 bits (615), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 121/126 (96%), Positives = 122/126 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 192 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 251
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDL
Sbjct: 252 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDL 311
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 312 KKNVVR 317
>gi|349584653|dbj|BAL03079.1| abnormal chemosensory jump 6, isoform C [Bombyx mori]
Length = 350
Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/126 (96%), Positives = 122/126 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 206 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 265
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDL
Sbjct: 266 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDL 325
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 326 KKNVVR 331
>gi|349584649|dbj|BAL03077.1| abnormal chemosensory jump 6, isoform A [Bombyx mori]
Length = 356
Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/126 (96%), Positives = 122/126 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 212 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 271
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDL
Sbjct: 272 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDL 331
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 332 KKNVVR 337
>gi|349584651|dbj|BAL03078.1| abnormal chemosensory jump 6, isoform B [Bombyx mori]
Length = 355
Score = 241 bits (615), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/126 (96%), Positives = 122/126 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 211 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 270
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDL
Sbjct: 271 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDL 330
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 331 KKNVVR 336
>gi|349584657|dbj|BAL03081.1| abnormal chemosensory jump 6, isoform E [Bombyx mori]
Length = 289
Score = 241 bits (614), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 121/126 (96%), Positives = 122/126 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 145 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 204
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI AIAEKLDL
Sbjct: 205 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKITAIAEKLDL 264
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 265 KKNVVR 270
>gi|62473739|ref|NP_001014744.1| abnormal chemosensory jump 6, isoform C [Drosophila melanogaster]
gi|61677901|gb|AAX52497.1| abnormal chemosensory jump 6, isoform C [Drosophila melanogaster]
Length = 368
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 214 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 273
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 274 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 331
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 332 KKNVVR 337
>gi|212287996|gb|ABI34196.3| RT01016p [Drosophila melanogaster]
gi|212288002|gb|ABI34229.3| RT01116p [Drosophila melanogaster]
Length = 369
Score = 238 bits (606), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 215 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 274
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 275 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 332
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 333 KKNVVR 338
>gi|386764461|ref|NP_001245682.1| abnormal chemosensory jump 6, isoform G [Drosophila melanogaster]
gi|383293408|gb|AFH07396.1| abnormal chemosensory jump 6, isoform G [Drosophila melanogaster]
Length = 387
Score = 237 bits (605), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 233 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 292
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 293 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 350
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 351 KKNVVR 356
>gi|24642153|ref|NP_727845.1| abnormal chemosensory jump 6, isoform E [Drosophila melanogaster]
gi|22833163|gb|AAN09663.1| abnormal chemosensory jump 6, isoform E [Drosophila melanogaster]
Length = 375
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 221 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 280
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 281 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 338
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 339 KKNVVR 344
>gi|386764463|ref|NP_001245683.1| abnormal chemosensory jump 6, isoform H [Drosophila melanogaster]
gi|383293409|gb|AFH07397.1| abnormal chemosensory jump 6, isoform H [Drosophila melanogaster]
Length = 357
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 203 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 262
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 263 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 320
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 321 KKNVVR 326
>gi|62473727|ref|NP_001014743.1| abnormal chemosensory jump 6, isoform D [Drosophila melanogaster]
gi|61677902|gb|AAX52498.1| abnormal chemosensory jump 6, isoform D [Drosophila melanogaster]
Length = 394
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 240 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 299
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 300 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 357
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 358 KKNVVR 363
>gi|386764471|ref|NP_001245687.1| abnormal chemosensory jump 6, isoform L [Drosophila melanogaster]
gi|383293413|gb|AFH07401.1| abnormal chemosensory jump 6, isoform L [Drosophila melanogaster]
Length = 376
Score = 237 bits (605), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 222 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 281
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 282 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 339
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 340 KKNVVR 345
>gi|170058323|ref|XP_001864872.1| inhibitory pou [Culex quinquefasciatus]
gi|167877452|gb|EDS40835.1| inhibitory pou [Culex quinquefasciatus]
Length = 340
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 198 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 257
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 258 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 315
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 316 KKNVVR 321
>gi|221329936|ref|NP_001138198.1| abnormal chemosensory jump 6, isoform F [Drosophila melanogaster]
gi|220901779|gb|ACL82930.1| abnormal chemosensory jump 6, isoform F [Drosophila melanogaster]
Length = 364
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 210 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 269
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 270 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 327
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 328 KKNVVR 333
>gi|386764473|ref|NP_001245688.1| abnormal chemosensory jump 6, isoform M [Drosophila melanogaster]
gi|383293414|gb|AFH07402.1| abnormal chemosensory jump 6, isoform M [Drosophila melanogaster]
Length = 383
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 229 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 288
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 289 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 346
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 347 KKNVVR 352
>gi|321466430|gb|EFX77425.1| hypothetical protein DAPPUDRAFT_321295 [Daphnia pulex]
Length = 178
Score = 236 bits (602), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/126 (92%), Positives = 121/126 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANL+LPGVGALSQSTICRFESLTLSHNNMIALKPIL AWLEEAE
Sbjct: 32 RRIKLGVTQADVGKALANLRLPGVGALSQSTICRFESLTLSHNNMIALKPILHAWLEEAE 91
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQ +NKRRDP+APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 92 AQTRNKRRDPEAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 151
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 152 KKNVVR 157
>gi|312377308|gb|EFR24168.1| hypothetical protein AND_11422 [Anopheles darlingi]
Length = 496
Score = 235 bits (599), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 119/121 (98%), Positives = 119/121 (98%), Gaps = 2/121 (1%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN
Sbjct: 359 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 418
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
KRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV
Sbjct: 419 KRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 476
Query: 137 R 137
R
Sbjct: 477 R 477
>gi|347967307|ref|XP_308015.5| AGAP002172-PA [Anopheles gambiae str. PEST]
gi|333466356|gb|EAA03783.6| AGAP002172-PA [Anopheles gambiae str. PEST]
Length = 397
Score = 235 bits (599), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 120/126 (95%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 246 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 305
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 306 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 363
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 364 KKNVVR 369
>gi|8141|emb|CAA41342.1| Pou-domain protein [Drosophila melanogaster]
gi|227713|prf||1709357A I-POU protein
Length = 367
Score = 234 bits (598), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 119/126 (94%), Positives = 121/126 (96%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGA+SQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 213 RRIKLGVTQADVGKALANLKLPGVGAVSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 272
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEK KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 273 AQAKNKRRDPDAPSVLPAGEK--KRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 330
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 331 KKNVVR 336
>gi|241556601|ref|XP_002399754.1| POU domain protein, putative [Ixodes scapularis]
gi|215499712|gb|EEC09206.1| POU domain protein, putative [Ixodes scapularis]
Length = 282
Score = 223 bits (569), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/126 (89%), Positives = 117/126 (92%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG+ALANLKLPGVG+LSQSTICRFESLTLSHNNM+ALKPIL AWLE AE
Sbjct: 137 RRIKLGVTQADVGRALANLKLPGVGSLSQSTICRFESLTLSHNNMVALKPILGAWLEAAE 196
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKR D D P VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 197 AQAKNKRGDSDLPGVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 256
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 257 KKNVVR 262
>gi|269785107|ref|NP_001161509.1| BRN3 transcription factor [Saccoglossus kowalevskii]
gi|268053987|gb|ACY92480.1| BRN3 transcription factor [Saccoglossus kowalevskii]
Length = 331
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/126 (81%), Positives = 109/126 (86%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQ DVG AL NLKLPGVG+LSQSTICRFESLTLSHNNMIALKPIL AWLEEAE
Sbjct: 189 RRIKLGVTQCDVGSALGNLKLPGVGSLSQSTICRFESLTLSHNNMIALKPILSAWLEEAE 248
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AK+K ++PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 249 KAAKSKDKNPD---IFSNGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 305
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 306 KKNVVR 311
>gi|348516489|ref|XP_003445771.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Oreochromis niloticus]
Length = 369
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/121 (84%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 233 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 292
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 293 KMSKPD---IFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 349
Query: 137 R 137
R
Sbjct: 350 R 350
>gi|432851959|ref|XP_004067127.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Oryzias latipes]
Length = 370
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 102/121 (84%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 234 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 293
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 294 KMSKPD---IFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 350
Query: 137 R 137
R
Sbjct: 351 R 351
>gi|390336369|ref|XP_786727.2| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Strongylocentrotus purpuratus]
Length = 350
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/126 (81%), Positives = 112/126 (88%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVG+LSQSTICRFESLTLSHNNMIALKPIL AWL+EAE
Sbjct: 208 RRIKLGVTQADVGKALANLKLPGVGSLSQSTICRFESLTLSHNNMIALKPILAAWLDEAE 267
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A A++ R ++P +L G+KKRKRTSIAAPEKRSLEAYF VQPRPS EKIAAIAEKLDL
Sbjct: 268 AAARDNR---NSPGILDNGDKKRKRTSIAAPEKRSLEAYFTVQPRPSSEKIAAIAEKLDL 324
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 325 KKNVVR 330
>gi|47230584|emb|CAF99777.1| unnamed protein product [Tetraodon nigroviridis]
Length = 368
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/121 (84%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 232 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 291
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 292 KMSKPD---IYNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 348
Query: 137 R 137
R
Sbjct: 349 R 349
>gi|410932847|ref|XP_003979804.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Takifugu rubripes]
Length = 370
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/126 (81%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 229 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 288
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K PD + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 289 GAQREKMSKPD---IYNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 345
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 346 KKNVVR 351
>gi|339242071|ref|XP_003376961.1| POU domain, class 4, transcription factor 1 [Trichinella spiralis]
gi|316974298|gb|EFV57794.1| POU domain, class 4, transcription factor 1 [Trichinella spiralis]
Length = 338
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/121 (84%), Positives = 111/121 (91%), Gaps = 2/121 (1%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALANLKLPGVG+LSQSTICRFESLTLSHNNMIAL+PIL AWL++AEA AKN
Sbjct: 205 GVTQADVGKALANLKLPGVGSLSQSTICRFESLTLSHNNMIALRPILSAWLDQAEAVAKN 264
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K ++ + +LP EKKRKRTSIAAPEKRSLEAYF VQPRPSGEKIAAIAEKL+LKKNVV
Sbjct: 265 KLKENNG--ILPNIEKKRKRTSIAAPEKRSLEAYFTVQPRPSGEKIAAIAEKLELKKNVV 322
Query: 137 R 137
R
Sbjct: 323 R 323
>gi|410124577|emb|CBY77550.2| POU-IV a [Pecten maximus]
Length = 329
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 105/126 (83%), Positives = 108/126 (85%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 185 RRIKLGVTQADVGNALANLKLPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 244
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
QA+ KR L EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDL
Sbjct: 245 KQAREKREAEGQG--LACSEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDL 302
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 303 KKNVVR 308
>gi|403279068|ref|XP_003931091.1| PREDICTED: POU domain, class 4, transcription factor 1 [Saimiri
boliviensis boliviensis]
Length = 236
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 108/127 (85%), Gaps = 3/127 (2%)
Query: 11 SRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEA 70
S V GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEA
Sbjct: 94 STVPLLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEA 153
Query: 71 EAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
E + K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLD
Sbjct: 154 EGAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLD 210
Query: 131 LKKNVVR 137
LKKNVVR
Sbjct: 211 LKKNVVR 217
>gi|11066192|gb|AAG28492.1|AF196575_1 class IV POU-homeodomain protein [Xenopus laevis]
Length = 358
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 222 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 281
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 282 KLNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 338
Query: 137 R 137
R
Sbjct: 339 R 339
>gi|41152054|ref|NP_958442.1| POU domain, class 4, transcription factor 1 [Danio rerio]
gi|33604055|gb|AAH56326.1| POU domain, class 4, transcription factor 1 [Danio rerio]
gi|41946875|gb|AAH65954.1| Pou4f1 protein [Danio rerio]
Length = 366
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 225 RRIKLGVTQADVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 284
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K PD + EKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 285 GAQREKMSKPD---IFNGSEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 341
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 342 KKNVVR 347
>gi|301604667|ref|XP_002931972.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Xenopus (Silurana) tropicalis]
Length = 371
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 230 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 289
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 290 GAQREKLNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 346
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 347 KKNVVR 352
>gi|57999781|dbj|BAD88442.1| brain-specific homeobox/POU domain protein 3a [Danio rerio]
Length = 366
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 225 RRIKLGVTQADVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 284
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K PD + EKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 285 GAQREKMSKPD---IFNGSEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 341
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 342 KKNVVR 347
>gi|350589975|ref|XP_003482965.1| PREDICTED: POU domain, class 4, transcription factor 1-like [Sus
scrofa]
Length = 268
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 132 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 191
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 192 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 248
Query: 137 R 137
R
Sbjct: 249 R 249
>gi|402902239|ref|XP_003919520.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Papio anubis]
Length = 420
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 279 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 338
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 339 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 395
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 396 KKNVVR 401
>gi|440896528|gb|ELR48432.1| POU domain, class 4, transcription factor 1 [Bos grunniens mutus]
Length = 268
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 132 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 191
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 192 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 248
Query: 137 R 137
R
Sbjct: 249 R 249
>gi|332841445|ref|XP_003314220.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Pan troglodytes]
Length = 357
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 221 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 280
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 281 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 337
Query: 137 R 137
R
Sbjct: 338 R 338
>gi|395527481|ref|XP_003765873.1| PREDICTED: POU domain, class 4, transcription factor 1 [Sarcophilus
harrisii]
Length = 248
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 112 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 171
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 172 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 228
Query: 137 R 137
R
Sbjct: 229 R 229
>gi|351703117|gb|EHB06036.1| POU domain, class 4, transcription factor 3 [Heterocephalus glaber]
Length = 310
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 174 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 233
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 234 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 290
Query: 137 R 137
R
Sbjct: 291 R 291
>gi|431906908|gb|ELK11028.1| POU domain, class 4, transcription factor 1 [Pteropus alecto]
Length = 429
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 293 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 352
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 353 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 409
Query: 137 R 137
R
Sbjct: 410 R 410
>gi|418016|gb|AAA65605.1| octamer binding transcription factor 1 [Homo sapiens]
Length = 420
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 279 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 338
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 339 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 395
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 396 KKNVVR 401
>gi|110347449|ref|NP_006228.3| POU domain, class 4, transcription factor 1 [Homo sapiens]
gi|334302933|sp|Q01851.4|PO4F1_HUMAN RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A; AltName: Full=Homeobox/POU
domain protein RDC-1; AltName: Full=Oct-T1
gi|119600991|gb|EAW80585.1| POU domain, class 4, transcription factor 1, isoform CRA_b [Homo
sapiens]
gi|151555159|gb|AAI48793.1| POU class 4 homeobox 1 [synthetic construct]
gi|151556418|gb|AAI48331.1| POU class 4 homeobox 1 [synthetic construct]
Length = 419
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 278 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 337
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 338 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 394
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 395 KKNVVR 400
>gi|51921650|gb|AAU13951.1| Brn3a [Mus musculus]
Length = 421
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 280 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 339
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 340 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 396
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 397 KKNVVR 402
>gi|395833526|ref|XP_003789781.1| PREDICTED: POU domain, class 4, transcription factor 1 [Otolemur
garnettii]
Length = 316
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 180 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 239
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 240 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 296
Query: 137 R 137
R
Sbjct: 297 R 297
>gi|455743|gb|AAB29002.1| Brn-3.0=POU-domain protein [mice, trigeminal ganglion, Peptide, 420
aa]
Length = 420
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 279 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 338
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 339 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 395
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 396 KKNVVR 401
>gi|301769209|ref|XP_002920023.1| PREDICTED: POU domain, class 4, transcription factor 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 165 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 224
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 225 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 281
Query: 137 R 137
R
Sbjct: 282 R 282
>gi|281346918|gb|EFB22502.1| hypothetical protein PANDA_008696 [Ailuropoda melanoleuca]
Length = 297
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 161 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 220
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 221 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 277
Query: 137 R 137
R
Sbjct: 278 R 278
>gi|156938250|ref|NP_035273.3| POU domain, class 4, transcription factor 1 [Mus musculus]
gi|341942187|sp|P17208.3|PO4F1_MOUSE RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A; AltName: Full=Brn-3.0
Length = 421
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 280 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 339
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 340 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 396
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 397 KKNVVR 402
>gi|8490223|gb|AAB30577.2| class V POU transcription factor [Mus sp.]
gi|28932877|gb|AAO60105.1| neuronal transcription factor BRN3a long isoform [Mus musculus]
Length = 421
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 280 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 339
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 340 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 396
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 397 KKNVVR 402
>gi|119600990|gb|EAW80584.1| POU domain, class 4, transcription factor 1, isoform CRA_a [Homo
sapiens]
Length = 256
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 127 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 186
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 187 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 243
Query: 137 R 137
R
Sbjct: 244 R 244
>gi|119904806|ref|XP_001253068.1| PREDICTED: POU domain, class 4, transcription factor 1 [Bos taurus]
Length = 241
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 105 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 164
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 165 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 221
Query: 137 R 137
R
Sbjct: 222 R 222
>gi|426375725|ref|XP_004054673.1| PREDICTED: POU domain, class 4, transcription factor 1, partial
[Gorilla gorilla gorilla]
Length = 186
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 50 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 109
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 110 KM---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 166
Query: 137 R 137
R
Sbjct: 167 R 167
>gi|397509964|ref|XP_003825378.1| PREDICTED: POU domain, class 4, transcription factor 1, partial
[Pan paniscus]
Length = 174
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 38 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 97
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 98 KM---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 154
Query: 137 R 137
R
Sbjct: 155 R 155
>gi|544926|gb|AAB29703.1| class IV POU transcription factor gene Brn-3a product [mice, liver,
Peptide Partial, 147 aa, segment 2 of 2]
Length = 147
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 13 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 72
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+R + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 73 GA---QREKMNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 129
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 130 KKNVVR 135
>gi|259155128|ref|NP_001158806.1| POU domain, class 4, transcription factor 2 [Salmo salar]
gi|223647496|gb|ACN10506.1| POU domain, class 4, transcription factor 2 [Salmo salar]
Length = 380
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 109/126 (86%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 239 RRIKLGVTQADVGGALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 298
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R + P + GEKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 299 ---KSHREKLNKPELYNGGEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 355
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 356 KKNVVR 361
>gi|1083239|pir||S41511 Brn-3a protein - mouse
Length = 255
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 126 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 185
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 186 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 242
Query: 137 R 137
R
Sbjct: 243 R 243
>gi|602106|gb|AAA57161.1| POU domain factor [Homo sapiens]
gi|1582321|prf||2118317B Brn-3a gene
Length = 423
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 282 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 341
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 342 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 398
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 399 KKNVVR 404
>gi|334347040|ref|XP_003341880.1| PREDICTED: hypothetical protein LOC100620045 [Monodelphis
domestica]
Length = 377
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 236 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 295
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 296 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 352
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 353 KKNVVR 358
>gi|392353705|ref|XP_341373.4| PREDICTED: POU domain, class 4, transcription factor 1 [Rattus
norvegicus]
Length = 387
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 246 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 305
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 306 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 362
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 363 KKNVVR 368
>gi|363729168|ref|XP_003640606.1| PREDICTED: POU domain, class 4, transcription factor 1-like [Gallus
gallus]
Length = 487
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 351 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 410
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 411 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 467
Query: 137 R 137
R
Sbjct: 468 R 468
>gi|344275137|ref|XP_003409370.1| PREDICTED: POU domain, class 4, transcription factor 1-like,
partial [Loxodonta africana]
Length = 199
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 63 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 122
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 123 KM---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 179
Query: 137 R 137
R
Sbjct: 180 R 180
>gi|293342246|ref|XP_001076964.2| PREDICTED: uncharacterized protein LOC114503 [Rattus norvegicus]
Length = 352
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 216 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 275
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 276 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 332
Query: 137 R 137
R
Sbjct: 333 R 333
>gi|432895823|ref|XP_004076179.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Oryzias latipes]
Length = 350
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 214 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 273
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 274 KSNKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 330
Query: 137 R 137
R
Sbjct: 331 R 331
>gi|46397775|sp|P20266.2|PO4F1_RAT RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A
Length = 128
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 1 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 60
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+R + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 61 GA---QREKMNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 117
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 118 KKNVVR 123
>gi|395745467|ref|XP_003778272.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Pongo abelii]
Length = 491
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 350 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 409
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 410 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 466
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 467 KKNVVR 472
>gi|28932878|gb|AAO60106.1| neuronal transcription factor BRN3a short isoform [Mus musculus]
Length = 337
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 196 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 255
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 256 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 312
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 313 KKNVVR 318
>gi|66392152|ref|NP_571353.1| POU domain, class 4, transcription factor 3 [Danio rerio]
gi|269849631|sp|Q90435.2|PO4F3_DANRE RecName: Full=POU domain, class 4, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 3.1;
Short=Brain-3.1; Short=zfBrn-3.1
gi|62548392|gb|AAX86839.1| POU domain transcription factor Brn3C [Danio rerio]
Length = 331
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 195 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 254
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 255 KNGKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 311
Query: 137 R 137
R
Sbjct: 312 R 312
>gi|332216640|ref|XP_003257458.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Nomascus leucogenys]
Length = 305
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 164 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 223
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 224 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 280
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 281 KKNVVR 286
>gi|348518944|ref|XP_003446991.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Oreochromis niloticus]
Length = 352
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 216 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 275
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 276 KSSKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 332
Query: 137 R 137
R
Sbjct: 333 R 333
>gi|405962730|gb|EKC28379.1| Inhibitory POU protein [Crassostrea gigas]
Length = 364
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/126 (82%), Positives = 113/126 (89%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 221 RRIKLGVTQADVGAALANLKLPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 280
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
QA+ +R++ +A + A E+KRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDL
Sbjct: 281 RQAR-ERKEAEAGGL--AAERKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDL 337
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 338 KKNVVR 343
>gi|83751826|gb|ABC42926.1| class IV POU transcription factor [Branchiostoma floridae]
Length = 349
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 109/126 (86%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG+AL LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L+AWL EAE
Sbjct: 205 RRIKLGVTQADVGQALGKLKLPGVGSLSQSTICRFESLTLSHNNMVALKPVLEAWLGEAE 264
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
QA+ K+R PD + EKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 265 QQARAKQRSPD---IFNNAEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 321
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 322 KKNVVR 327
>gi|348583669|ref|XP_003477595.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1-like [Cavia porcellus]
Length = 306
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 165 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 224
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 225 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 281
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 282 KKNVVR 287
>gi|47219259|emb|CAG11721.1| unnamed protein product [Tetraodon nigroviridis]
Length = 359
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 218 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 277
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 278 AAYREKSAKPD---LFSGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 334
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 335 KKNVVR 340
>gi|426246977|ref|XP_004017263.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 2 [Ovis aries]
Length = 325
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 189 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 245
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 246 HREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 305
Query: 137 R 137
R
Sbjct: 306 R 306
>gi|395542581|ref|XP_003773205.1| PREDICTED: POU domain, class 4, transcription factor 2 [Sarcophilus
harrisii]
Length = 353
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 212 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 271
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 272 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 328
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 329 KKNVVR 334
>gi|1083240|pir||S41512 Brn-3b protein - mouse
Length = 236
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 107 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 163
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 164 HREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 223
Query: 137 R 137
R
Sbjct: 224 R 224
>gi|148224742|ref|NP_001079200.1| POU class 4 homeobox 1 [Xenopus laevis]
gi|10441360|gb|AAG17008.1|AF184979_1 class IV POU-homeodomain protein [Xenopus laevis]
Length = 343
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 207 GVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQRE 266
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 267 KMAKPE---IFSGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 323
Query: 137 R 137
R
Sbjct: 324 R 324
>gi|148226809|ref|NP_001090776.1| POU class 4 homeobox 1 [Xenopus (Silurana) tropicalis]
gi|134024016|gb|AAI35128.1| pou4f1.2 protein [Xenopus (Silurana) tropicalis]
Length = 340
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 204 GVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQRE 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 264 KMAKPE---IFTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 320
Query: 137 R 137
R
Sbjct: 321 R 321
>gi|260812409|ref|XP_002600913.1| hypothetical protein BRAFLDRAFT_215014 [Branchiostoma floridae]
gi|229286203|gb|EEN56925.1| hypothetical protein BRAFLDRAFT_215014 [Branchiostoma floridae]
Length = 166
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 109/126 (86%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG+AL LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L+AWL EAE
Sbjct: 22 RRIKLGVTQADVGQALGKLKLPGVGSLSQSTICRFESLTLSHNNMVALKPVLEAWLGEAE 81
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
QA+ K+R PD + EKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 82 QQARAKQRSPD---IFNNAEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 138
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 139 KKNVVR 144
>gi|109075830|ref|XP_001098227.1| PREDICTED: POU domain, class 4, transcription factor 2 [Macaca
mulatta]
gi|355687642|gb|EHH26226.1| hypothetical protein EGK_16141 [Macaca mulatta]
Length = 408
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|281427205|ref|NP_599182.1| POU domain, class 4, transcription factor 2 [Rattus norvegicus]
gi|149037964|gb|EDL92324.1| POU domain, class 4, transcription factor 2 [Rattus norvegicus]
Length = 412
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 271 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 330
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 331 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 387
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 388 KKNVVR 393
>gi|301761736|ref|XP_002916287.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Ailuropoda melanoleuca]
gi|281354088|gb|EFB29672.1| hypothetical protein PANDA_004351 [Ailuropoda melanoleuca]
Length = 408
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|47059067|ref|NP_620394.2| POU domain, class 4, transcription factor 2 [Mus musculus]
gi|2495301|sp|Q63934.1|PO4F2_MOUSE RecName: Full=POU domain, class 4, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 3B;
Short=Brain-3B; Short=Brn-3B; AltName: Full=Brn-3.2
gi|2143434|pir||I58156 Brn-3.2 - mouse
gi|545069|gb|AAC60672.1| Brn-3.2 [Mus sp.]
gi|26352582|dbj|BAC39921.1| unnamed protein product [Mus musculus]
gi|148678910|gb|EDL10857.1| POU domain, class 4, transcription factor 2 [Mus musculus]
gi|162318702|gb|AAI56892.1| POU domain, class 4, transcription factor 2 [synthetic construct]
gi|162319622|gb|AAI56471.1| POU domain, class 4, transcription factor 2 [synthetic construct]
Length = 411
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 270 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 329
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 330 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 386
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 387 KKNVVR 392
>gi|327273944|ref|XP_003221739.1| PREDICTED: POU domain, class 4, transcription factor 2-like [Anolis
carolinensis]
Length = 342
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 201 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + GEKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 261 ---KSHREKLTKPELFNGGEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 317
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 318 KKNVVR 323
>gi|348582246|ref|XP_003476887.1| PREDICTED: POU domain, class 4, transcription factor 2-like [Cavia
porcellus]
Length = 408
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|546434|gb|AAB30578.1| BRN-3b [Mus musculus]
Length = 322
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 186 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 242
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 243 HREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 302
Query: 137 R 137
R
Sbjct: 303 R 303
>gi|432093091|gb|ELK25381.1| POU domain, class 4, transcription factor 2 [Myotis davidii]
Length = 404
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 263 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 322
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 323 ---KSHREKLTKPELFNSAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 379
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 380 KKNVVR 385
>gi|402870590|ref|XP_003899295.1| PREDICTED: POU domain, class 4, transcription factor 2 [Papio
anubis]
Length = 408
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|444729639|gb|ELW70049.1| POU domain, class 4, transcription factor 2 [Tupaia chinensis]
Length = 265
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 124 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 183
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 184 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 240
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 241 KKNVVR 246
>gi|312469|emb|CAA50589.1| Brn-3b [Homo sapiens]
Length = 264
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 123 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 182
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 183 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 239
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 240 KKNVVR 245
>gi|431918288|gb|ELK17515.1| POU domain, class 4, transcription factor 2 [Pteropus alecto]
Length = 408
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|73977853|ref|XP_853453.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 3
[Canis lupus familiaris]
Length = 408
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|410956775|ref|XP_003985013.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 1
[Felis catus]
gi|410956777|ref|XP_003985014.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 2
[Felis catus]
Length = 265
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 124 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 183
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 184 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 240
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 241 KKNVVR 246
>gi|395834527|ref|XP_003790251.1| PREDICTED: POU domain, class 4, transcription factor 2 [Otolemur
garnettii]
Length = 407
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 266 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 325
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 326 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 382
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 383 KKNVVR 388
>gi|544929|gb|AAB29705.1| class IV POU transcription factor gene Brn-3b product [mice, liver,
Peptide Partial, 147 aa, segment 2 of 2]
Length = 147
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 18 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 74
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 75 HREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 134
Query: 137 R 137
R
Sbjct: 135 R 135
>gi|300794126|ref|NP_001179881.1| POU domain, class 4, transcription factor 2 [Bos taurus]
gi|296478787|tpg|DAA20902.1| TPA: Brn3b POU domain transcription factor-like [Bos taurus]
gi|440892619|gb|ELR45731.1| POU domain, class 4, transcription factor 2 [Bos grunniens mutus]
Length = 408
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|344291750|ref|XP_003417593.1| PREDICTED: POU domain, class 4, transcription factor 2 [Loxodonta
africana]
Length = 407
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 266 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 325
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 326 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 382
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 383 KKNVVR 388
>gi|149698177|ref|XP_001501851.1| PREDICTED: POU domain, class 4, transcription factor 2 [Equus
caballus]
Length = 406
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 265 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 324
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 325 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 381
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 382 KKNVVR 387
>gi|332217364|ref|XP_003257829.1| PREDICTED: POU domain, class 4, transcription factor 2 [Nomascus
leucogenys]
Length = 408
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|395504831|ref|XP_003756750.1| PREDICTED: POU domain, class 4, transcription factor 3 [Sarcophilus
harrisii]
Length = 337
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 201 GVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 260
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 261 KNTKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 317
Query: 137 R 137
R
Sbjct: 318 R 318
>gi|126290542|ref|XP_001369099.1| PREDICTED: POU domain, class 4, transcription factor 3 [Monodelphis
domestica]
Length = 337
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 201 GVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 260
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 261 KNTKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 317
Query: 137 R 137
R
Sbjct: 318 R 318
>gi|403285406|ref|XP_003934017.1| PREDICTED: POU domain, class 4, transcription factor 3 [Saimiri
boliviensis boliviensis]
Length = 338
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|426345637|ref|XP_004040511.1| PREDICTED: POU domain, class 4, transcription factor 2 [Gorilla
gorilla gorilla]
Length = 407
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 266 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 325
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 326 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 382
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 383 KKNVVR 388
>gi|403272382|ref|XP_003928044.1| PREDICTED: POU domain, class 4, transcription factor 2 [Saimiri
boliviensis boliviensis]
Length = 408
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|297674445|ref|XP_002815238.1| PREDICTED: POU domain, class 4, transcription factor 2 [Pongo
abelii]
Length = 408
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|189054631|dbj|BAG37481.1| unnamed protein product [Homo sapiens]
gi|223459600|gb|AAI36346.1| POU class 4 homeobox 2 [Homo sapiens]
gi|223460822|gb|AAI36345.1| POU class 4 homeobox 2 [Homo sapiens]
Length = 410
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 269 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 328
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 329 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 385
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 386 KKNVVR 391
>gi|114596306|ref|XP_526699.2| PREDICTED: POU domain, class 4, transcription factor 2 [Pan
troglodytes]
gi|397489785|ref|XP_003815898.1| PREDICTED: POU domain, class 4, transcription factor 2 [Pan
paniscus]
Length = 406
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 265 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 324
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 325 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 381
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 382 KKNVVR 387
>gi|110347455|ref|NP_004566.2| POU domain, class 4, transcription factor 2 [Homo sapiens]
gi|290457652|sp|Q12837.2|PO4F2_HUMAN RecName: Full=POU domain, class 4, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 3B;
Short=Brain-3B; Short=Brn-3B
gi|119625430|gb|EAX05025.1| POU domain, class 4, transcription factor 2 [Homo sapiens]
Length = 409
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 268 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 327
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 328 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 384
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 385 KKNVVR 390
>gi|458391|gb|AAA16509.1| Brn-3b [Homo sapiens]
Length = 410
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 269 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 328
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 329 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 385
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 386 KKNVVR 391
>gi|296195447|ref|XP_002745471.1| PREDICTED: POU domain, class 4, transcription factor 2 isoform 1
[Callithrix jacchus]
Length = 408
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|4505965|ref|NP_002691.1| POU domain, class 4, transcription factor 3 [Homo sapiens]
gi|55625186|ref|XP_527063.1| PREDICTED: POU domain, class 4, transcription factor 3 [Pan
troglodytes]
gi|109079182|ref|XP_001100319.1| PREDICTED: POU domain, class 4, transcription factor 3 [Macaca
mulatta]
gi|296193126|ref|XP_002744373.1| PREDICTED: POU domain, class 4, transcription factor 3 [Callithrix
jacchus]
gi|297676316|ref|XP_002816085.1| PREDICTED: POU domain, class 4, transcription factor 3 [Pongo
abelii]
gi|397517875|ref|XP_003829130.1| PREDICTED: POU domain, class 4, transcription factor 3 [Pan
paniscus]
gi|402872948|ref|XP_003900353.1| PREDICTED: POU domain, class 4, transcription factor 3 [Papio
anubis]
gi|426350491|ref|XP_004042805.1| PREDICTED: POU domain, class 4, transcription factor 3 [Gorilla
gorilla gorilla]
gi|2495302|sp|Q15319.1|PO4F3_HUMAN RecName: Full=POU domain, class 4, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 3C;
Short=Brain-3C; Short=Brn-3C
gi|602102|gb|AAA57160.1| POU domain factor [Homo sapiens]
gi|85397011|gb|AAI04924.1| POU class 4 homeobox 3 [Homo sapiens]
gi|85566887|gb|AAI12208.1| POU class 4 homeobox 3 [Homo sapiens]
gi|167773487|gb|ABZ92178.1| POU class 4 homeobox 3 [synthetic construct]
gi|208968685|dbj|BAG74181.1| POU class 4 homeobox 3 [synthetic construct]
gi|313882888|gb|ADR82930.1| POU class 4 homeobox 3 [synthetic construct]
gi|355691717|gb|EHH26902.1| hypothetical protein EGK_16984 [Macaca mulatta]
gi|1582320|prf||2118317A Brn-3c gene
Length = 338
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|2981019|gb|AAC06203.1| transcription factor POU4F3 [Homo sapiens]
Length = 338
Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 202 GVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 261
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 262 KNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 318
Query: 137 R 137
R
Sbjct: 319 R 319
>gi|431892513|gb|ELK02946.1| POU domain, class 4, transcription factor 3 [Pteropus alecto]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|332234875|ref|XP_003266629.1| PREDICTED: POU domain, class 4, transcription factor 3 [Nomascus
leucogenys]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 202 GVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 261
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 262 KNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 318
Query: 137 R 137
R
Sbjct: 319 R 319
>gi|169144954|gb|ACA49233.1| POU domain class 4 transcription factor 2 [Homo sapiens]
Length = 403
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 262 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 322 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 378
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 379 KKNVVR 384
>gi|300796274|ref|NP_001178964.1| POU domain, class 4, transcription factor 3 [Bos taurus]
gi|57043542|ref|XP_544328.1| PREDICTED: POU domain, class 4, transcription factor 3 [Canis lupus
familiaris]
gi|301778637|ref|XP_002924734.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Ailuropoda melanoleuca]
gi|348583198|ref|XP_003477360.1| PREDICTED: POU domain, class 4, transcription factor 3 [Cavia
porcellus]
gi|395817328|ref|XP_003782125.1| PREDICTED: POU domain, class 4, transcription factor 3 [Otolemur
garnettii]
gi|281347269|gb|EFB22853.1| hypothetical protein PANDA_014130 [Ailuropoda melanoleuca]
gi|296485177|tpg|DAA27292.1| TPA: POU class 4 homeobox 3-like [Bos taurus]
gi|351714784|gb|EHB17703.1| POU domain, class 4, transcription factor 3 [Heterocephalus glaber]
gi|440896533|gb|ELR48436.1| POU domain, class 4, transcription factor 3 [Bos grunniens mutus]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|426229808|ref|XP_004008975.1| PREDICTED: POU domain, class 4, transcription factor 3 [Ovis aries]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|444725887|gb|ELW66438.1| POU domain, class 4, transcription factor 3 [Tupaia chinensis]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|311250430|ref|XP_003124119.1| PREDICTED: POU domain, class 4, transcription factor 3 [Sus scrofa]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|410948549|ref|XP_003980994.1| PREDICTED: POU domain, class 4, transcription factor 3 [Felis
catus]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|350587752|ref|XP_003129209.3| PREDICTED: POU domain, class 4, transcription factor 2-like [Sus
scrofa]
Length = 322
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 186 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 242
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 243 HREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 302
Query: 137 R 137
R
Sbjct: 303 R 303
>gi|247270106|ref|NP_620395.2| POU domain, class 4, transcription factor 3 [Mus musculus]
gi|341941406|sp|Q63955.2|PO4F3_MOUSE RecName: Full=POU domain, class 4, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 3C;
Short=Brain-3C; Short=Brn-3C
gi|148678088|gb|EDL10035.1| POU domain, class 4, transcription factor 3 [Mus musculus]
gi|148877785|gb|AAI45942.1| Pou4f3 protein [Mus musculus]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|455744|gb|AAB29003.1| Brn-3.1=POU-domain protein [mice, trigeminal ganglion, Peptide, 338
aa]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|350587754|ref|XP_003482480.1| PREDICTED: POU domain, class 4, transcription factor 2 [Sus scrofa]
Length = 408
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 267 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 327 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 383
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 384 KKNVVR 389
>gi|546436|gb|AAB30579.1| BRN-3c [Mus musculus]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|351714528|gb|EHB17447.1| POU domain, class 4, transcription factor 2 [Heterocephalus glaber]
Length = 205
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 64 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 123
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 124 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 180
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 181 KKNVVR 186
>gi|126331321|ref|XP_001366960.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Monodelphis domestica]
Length = 412
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 271 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 330
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 331 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 387
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 388 KKNVVR 393
>gi|410914660|ref|XP_003970805.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Takifugu rubripes]
Length = 351
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWL EAEA +
Sbjct: 215 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLGEAEAAYRE 274
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 275 KSTKPD---LFSGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 331
Query: 137 R 137
R
Sbjct: 332 R 332
>gi|363733116|ref|XP_003641203.1| PREDICTED: POU domain, class 4, transcription factor 2, partial
[Gallus gallus]
Length = 142
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 1 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 60
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 61 ---KSHREKLAKPELFSGAEKKRKRTSIAAPEKRSLEAYFALQPRPSSEKIAAIAEKLDL 117
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 118 KKNVVR 123
>gi|157820659|ref|NP_001102359.1| POU class 4 homeobox 3 [Rattus norvegicus]
gi|149017434|gb|EDL76485.1| POU domain, class 4, transcription factor 3 (predicted) [Rattus
norvegicus]
Length = 338
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|391331464|ref|XP_003740166.1| PREDICTED: inhibitory POU protein-like [Metaseiulus occidentalis]
Length = 382
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 108/126 (85%), Positives = 116/126 (92%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG+ALANL+LPGVG+LSQSTICRFESLTLSHNNM+ALKPIL AWLE AE
Sbjct: 222 RRIKLGVTQADVGRALANLRLPGVGSLSQSTICRFESLTLSHNNMVALKPILAAWLEAAE 281
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAK KRRDPD P VLPAGEKKRKRTSIAAPEKRSLEA+FA+QPRPSGE+IA IA KLDL
Sbjct: 282 AQAKCKRRDPDMPGVLPAGEKKRKRTSIAAPEKRSLEAFFALQPRPSGERIADIASKLDL 341
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 342 KKNVVR 347
>gi|355749603|gb|EHH54002.1| hypothetical protein EGM_14732, partial [Macaca fascicularis]
Length = 320
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 179 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 238
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 239 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 295
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 296 KKNVVR 301
>gi|301619177|ref|XP_002938977.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Xenopus (Silurana) tropicalis]
Length = 379
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 238 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 297
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 298 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 354
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 355 KKNVVR 360
>gi|35915|emb|CAA45907.1| RDC-1 [Homo sapiens]
Length = 331
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 108/126 (85%), Gaps = 4/126 (3%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 191 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 250
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
++ + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 251 GPSEKMNK----PELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 306
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 307 KKNVVR 312
>gi|45382097|ref|NP_990090.1| brain-specific homeobox/POU domain protein 3 [Gallus gallus]
gi|2495304|sp|Q91998.1|BRN3_CHICK RecName: Full=Brain-specific homeobox/POU domain protein 3;
Short=Brain-3; Short=Brn-3
gi|1032487|emb|CAA63049.1| brn-3 [Gallus gallus]
gi|1032489|emb|CAA63048.1| brn-3 [Gallus gallus]
Length = 341
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 205 GVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQRE 264
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 265 KMTKPE---IYTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 321
Query: 137 R 137
R
Sbjct: 322 R 322
>gi|544932|gb|AAB29707.1| class IV POU transcription factor gene Brn-3c product [mice, liver,
Peptide Partial, 147 aa, segment 2 of 2]
Length = 147
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 18 GVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 77
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 78 KNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 134
Query: 137 R 137
R
Sbjct: 135 R 135
>gi|291387569|ref|XP_002710193.1| PREDICTED: POU class 4 homeobox 3-like [Oryctolagus cuniculus]
Length = 166
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 25 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 84
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 85 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 141
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 142 KKNVVR 147
>gi|432901481|ref|XP_004076857.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Oryzias latipes]
Length = 348
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE
Sbjct: 207 RRIKLGVTQADVGAALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE 266
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ +R P + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 267 ---RAQREKMSKPEIFNGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 323
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 324 KKNVVR 329
>gi|32815064|gb|AAP34392.1| POU domain transcription factor Brn3b-s [Danio rerio]
Length = 319
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 183 GVTQADVGSALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 239
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R + P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 240 HREKLNKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 299
Query: 137 R 137
R
Sbjct: 300 R 300
>gi|47086419|ref|NP_997972.1| POU domain, class 4, transcription factor 2 [Danio rerio]
gi|32815062|gb|AAP34391.1| POU domain transcription factor Brn3b-l [Danio rerio]
gi|46804745|dbj|BAD16811.1| Pou4f2/Brn-3b [Danio rerio]
gi|190336895|gb|AAI62336.1| POU domain, class 4, transcription factor 2 [Danio rerio]
gi|190337912|gb|AAI62312.1| POU domain, class 4, transcription factor 2 [Danio rerio]
Length = 384
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 243 RRIKLGVTQADVGSALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 302
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R + P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 303 ---KSHREKLNKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 359
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 360 KKNVVR 365
>gi|338713587|ref|XP_001501863.3| PREDICTED: POU domain, class 4, transcription factor 3-like [Equus
caballus]
Length = 398
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 257 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 316
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 317 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 373
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 374 KKNVVR 379
>gi|344265609|ref|XP_003404875.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Loxodonta africana]
Length = 396
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 255 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 314
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 315 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 371
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 372 KKNVVR 377
>gi|1083241|pir||S41513 Brn-3c protein - mouse
Length = 250
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 121 GVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 180
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 181 KNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 237
Query: 137 R 137
R
Sbjct: 238 R 238
>gi|121582392|ref|NP_001073527.1| uncharacterized protein LOC572084 [Danio rerio]
gi|118764114|gb|AAI28836.1| Zgc:158291 [Danio rerio]
Length = 343
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE
Sbjct: 202 RRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE 261
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 262 RAQREKMAKPE---IFNGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 318
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 319 KKNVVR 324
>gi|301611601|ref|XP_002935313.1| PREDICTED: POU domain, class 4, transcription factor 3-like
[Xenopus (Silurana) tropicalis]
Length = 337
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/126 (76%), Positives = 109/126 (86%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWL+EAE
Sbjct: 196 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLDEAE 255
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + + E+KRKRTSIAAPEKRSLEAYF++QPRPS EKIAAIAEKLDL
Sbjct: 256 AAYREKNAKPE---LFNSSERKRKRTSIAAPEKRSLEAYFSIQPRPSSEKIAAIAEKLDL 312
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 313 KKNVVR 318
>gi|348532016|ref|XP_003453503.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Oreochromis niloticus]
Length = 347
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE
Sbjct: 206 RRIKLGVTQADVGAALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE 265
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ +R P + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 266 ---RAQREKMTKPELFNGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 322
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 323 KKNVVR 328
>gi|47217359|emb|CAG11064.1| unnamed protein product [Tetraodon nigroviridis]
Length = 203
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 63 RRIKLGVTQADVGAALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 122
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R + P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 123 ---KSHREKLNKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 179
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 180 KKNVVR 185
>gi|2495299|sp|P55968.1|PO4F1_CHICK RecName: Full=POU domain, class 4, transcription factor 1; AltName:
Full=Brain-specific homeobox/POU domain protein 3A;
Short=Brain-3A; Short=Brn-3A
gi|543468|pir||S40959 transcription factor Brn-3A - rat (fragment)
gi|930136|emb|CAA36218.1| Brn-3 POU-box protein (116 AA) [Mus musculus]
gi|1684822|gb|AAD03154.1| POU domain factor [Gallus gallus]
Length = 116
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 104/119 (87%), Gaps = 3/119 (2%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 77
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREK 60
Query: 78 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 61 MNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 116
>gi|345326620|ref|XP_001511297.2| PREDICTED: hypothetical protein LOC100080414 [Ornithorhynchus
anatinus]
Length = 827
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 100/121 (82%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 278 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KS 334
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 335 HREKLTKPELFSGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 394
Query: 137 R 137
R
Sbjct: 395 R 395
>gi|410932089|ref|XP_003979426.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Takifugu rubripes]
Length = 382
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 241 RRIKLGVTQADVGAALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 300
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R + P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 301 ---KSHREKLNKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 357
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 358 KKNVVR 363
>gi|432847200|ref|XP_004065980.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Oryzias latipes]
Length = 382
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 241 RRIKLGVTQADVGSALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 300
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R + P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 301 ---KSHREKLNKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 357
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 358 KKNVVR 363
>gi|508494|gb|AAA36393.1| POU domain protein, partial [Homo sapiens]
Length = 118
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/120 (82%), Positives = 104/120 (86%), Gaps = 3/120 (2%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 77
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSH 57
Query: 78 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 58 REKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVR 117
>gi|345328468|ref|XP_001514803.2| PREDICTED: hypothetical protein LOC100084310 [Ornithorhynchus
anatinus]
Length = 446
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 310 GVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQRE 369
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+A G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 370 KLTKPEA---YGGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 426
Query: 137 R 137
R
Sbjct: 427 R 427
>gi|348524418|ref|XP_003449720.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Oreochromis niloticus]
Length = 382
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/126 (79%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 241 RRIKLGVTQADVGAALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 300
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R + P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 301 ---KSHREKLNKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 357
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 358 KKNVVR 363
>gi|355750291|gb|EHH54629.1| hypothetical protein EGM_15508 [Macaca fascicularis]
Length = 338
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWL EAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLGEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>gi|16924186|gb|AAK26109.2|AF231943_1 class IV POU transcription factor [Haliotis asinina]
Length = 140
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 97/120 (80%), Positives = 107/120 (89%), Gaps = 3/120 (2%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 77
VTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE A+++
Sbjct: 1 VTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKAARDR 60
Query: 78 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
+ + + ++ +KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDLKKNVVR
Sbjct: 61 KAEGE---MMGGADKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDLKKNVVR 117
>gi|449499957|ref|XP_002187604.2| PREDICTED: POU domain, class 4, transcription factor 2 [Taeniopygia
guttata]
Length = 373
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 232 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 291
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 292 ---KSHREKLAKPELFSGAEKKRKRTSIAAPEKRSLEAYFALQPRPSSEKIAAIAEKLDL 348
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 349 KKNVVR 354
>gi|454293|gb|AAA31105.1| POU domain region; homolog of mouse brn-3, partial [Sus scrofa]
Length = 134
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALA LK+PGVG+LSQSTICRFESLTLSHNNMIALKPIL+AWLEEAE
Sbjct: 4 RRMKLGVTQADVGSALAYLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILRAWLEEAE 63
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+R + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 64 GA---QREKMNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 120
Query: 132 KKNVVR 137
K+NVVR
Sbjct: 121 KRNVVR 126
>gi|410914858|ref|XP_003970904.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Takifugu rubripes]
Length = 347
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 104/121 (85%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 211 GVTQADVGAALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERVQRE 270
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + +KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 271 KMAKPE---IFNGADKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 327
Query: 137 R 137
R
Sbjct: 328 R 328
>gi|543469|pir||S40960 transcription factor Brn-3B - rat (fragment)
gi|258576|gb|AAB23880.1| Brn-3B=POU family transcription factor [rats, neuronal cell line
ND7, Peptide Partial, 116 aa]
Length = 116
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/119 (82%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 77
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSH 57
Query: 78 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 58 REKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 116
>gi|1323762|gb|AAB00435.1| Brn-3.1 POU domain, partial [Danio rerio]
Length = 116
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/119 (80%), Positives = 103/119 (86%), Gaps = 3/119 (2%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 77
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA + K
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREK 60
Query: 78 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIA IAEKLDLKKNVV
Sbjct: 61 NGKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIARIAEKLDLKKNVV 116
>gi|172087298|ref|XP_001913191.1| brain-specific homeobox/POU domain protein 3 [Oikopleura dioica]
gi|48994299|gb|AAT47873.1| brain-specific homeobox/POU domain protein 3 [Oikopleura dioica]
gi|56694824|gb|AAW23074.1| POU4 [Oikopleura dioica]
gi|313221899|emb|CBY38954.1| unnamed protein product [Oikopleura dioica]
gi|313230047|emb|CBY07751.1| unnamed protein product [Oikopleura dioica]
Length = 384
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/121 (80%), Positives = 103/121 (85%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG+AL LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPILQAWLE AE AK
Sbjct: 243 GVTQADVGQALGKLKIPGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLERAENAAKA 302
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K ++ D EKKRKRTSIAAPEKRSLEAYF VQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 303 K-KEADG---YTGNEKKRKRTSIAAPEKRSLEAYFTVQPRPSSEKIAAIAEKLDLKKNVV 358
Query: 137 R 137
R
Sbjct: 359 R 359
>gi|70570942|dbj|BAE06649.1| transcription factor protein [Ciona intestinalis]
Length = 388
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/121 (79%), Positives = 103/121 (85%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQ DVG+ALANLKLPGVG+LSQSTICRFESLTLSHNNM+ALKPIL WLE+AE + +
Sbjct: 250 GVTQNDVGQALANLKLPGVGSLSQSTICRFESLTLSHNNMVALKPILITWLEKAEEEHRR 309
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 310 KMEN------AAMGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 363
Query: 137 R 137
R
Sbjct: 364 R 364
>gi|393909758|gb|EJD75577.1| hypothetical protein LOAG_17292 [Loa loa]
Length = 329
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 188 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEVTKT 247
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K DA +LP +KKRKRTSIAAPEKR LE YF QPRPSGE+I+AIA KLDLKKNVV
Sbjct: 248 KDIAGDAQGILPNMDKKRKRTSIAAPEKRLLEDYFRQQPRPSGERISAIASKLDLKKNVV 307
Query: 137 R 137
R
Sbjct: 308 R 308
>gi|74136077|ref|NP_001027972.1| POU domain, class 4, transcription factor [Ciona intestinalis]
gi|56900898|gb|AAW31742.1| POU IV homeodomain transcription factor [Ciona intestinalis]
Length = 412
Score = 189 bits (479), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/121 (79%), Positives = 103/121 (85%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQ DVG+ALANLKLPGVG+LSQSTICRFESLTLSHNNM+ALKPIL WLE+AE + +
Sbjct: 274 GVTQNDVGQALANLKLPGVGSLSQSTICRFESLTLSHNNMVALKPILITWLEKAEEEHRR 333
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 334 KMEN------AAMGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 387
Query: 137 R 137
R
Sbjct: 388 R 388
>gi|170585378|ref|XP_001897461.1| transcription factor unc-86 [Brugia malayi]
gi|158595140|gb|EDP33713.1| transcription factor unc-86, putative [Brugia malayi]
Length = 239
Score = 188 bits (477), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 74 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEVTKT 133
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K DA +LP +KKRKRTSIAAPEKR LE YF QPRPSGE+I+AIA KLDLKKNVV
Sbjct: 134 KDMAGDAQGILPNMDKKRKRTSIAAPEKRLLEDYFRQQPRPSGERISAIANKLDLKKNVV 193
Query: 137 R 137
R
Sbjct: 194 R 194
>gi|402594024|gb|EJW87951.1| hypothetical protein WUBG_01136 [Wuchereria bancrofti]
Length = 212
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 74 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEVTKT 133
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K DA +LP +KKRKRTSIAAPEKR LE YF QPRPSGE+I+AIA KLDLKKNVV
Sbjct: 134 KDMAGDAQGILPNMDKKRKRTSIAAPEKRLLEDYFRQQPRPSGERISAIANKLDLKKNVV 193
Query: 137 R 137
R
Sbjct: 194 R 194
>gi|392895729|ref|NP_498795.2| Protein UNC-86, isoform a [Caenorhabditis elegans]
gi|351020668|emb|CCD62655.1| Protein UNC-86, isoform a [Caenorhabditis elegans]
Length = 319
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 140 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 199
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 200 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 259
Query: 137 R 137
R
Sbjct: 260 R 260
>gi|308501881|ref|XP_003113125.1| CRE-UNC-86 protein [Caenorhabditis remanei]
gi|308265426|gb|EFP09379.1| CRE-UNC-86 protein [Caenorhabditis remanei]
Length = 346
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 167 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 226
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 227 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 286
Query: 137 R 137
R
Sbjct: 287 R 287
>gi|268573958|ref|XP_002641956.1| C. briggsae CBR-UNC-86 protein [Caenorhabditis briggsae]
Length = 357
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 178 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 237
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 238 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 297
Query: 137 R 137
R
Sbjct: 298 R 298
>gi|341897269|gb|EGT53204.1| CBN-UNC-86 protein [Caenorhabditis brenneri]
Length = 360
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 182 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 241
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 242 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 301
Query: 137 R 137
R
Sbjct: 302 R 302
>gi|324510692|gb|ADY44470.1| Transcription factor unc-86 [Ascaris suum]
Length = 352
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WL++AE K
Sbjct: 193 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLDKAEEAMKT 252
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE YF QPRPSGE+I+AIA+KLDLKKNVV
Sbjct: 253 KDSVGDTQGILPNTDKKRKRTSIAAPEKRLLEDYFRQQPRPSGERISAIADKLDLKKNVV 312
Query: 137 R 137
R
Sbjct: 313 R 313
>gi|392895731|ref|NP_001021191.2| Protein UNC-86, isoform b [Caenorhabditis elegans]
gi|351020669|emb|CCD62656.1| Protein UNC-86, isoform b [Caenorhabditis elegans]
Length = 357
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 178 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 237
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 238 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 297
Query: 137 R 137
R
Sbjct: 298 R 298
>gi|449662025|ref|XP_004205460.1| PREDICTED: POU domain, class 4, transcription factor 2-like isoform
2 [Hydra magnipapillata]
Length = 302
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWL+EAE +
Sbjct: 167 GVTQADVGTALAHLKLPGVGSLSQSTICRFESLTLSHNNMMALKPVLSAWLDEAERANRM 226
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K +D + LP +KKRKRTSI A EKRSLEAYFA+QPRPS +KIAAIAEKLDL KNVV
Sbjct: 227 KSKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAMQPRPSSDKIAAIAEKLDLSKNVV 283
Query: 137 R 137
R
Sbjct: 284 R 284
>gi|156487|gb|AAA28159.1| unc-86 alternate protein [Caenorhabditis elegans]
Length = 429
Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 250 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 309
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 310 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 369
Query: 137 R 137
R
Sbjct: 370 R 370
>gi|440572045|gb|AGC12567.1| Brn3, partial [Platynereis dumerilii]
Length = 231
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG AL LKLPGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 80 RRIKLGVTQADVGSALGKLKLPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 139
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A A+ + + DA L EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDL
Sbjct: 140 AAARESKANADA---LGGAEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDL 196
Query: 132 KKNVVR 137
K+NVVR
Sbjct: 197 KENVVR 202
>gi|137030|sp|P13528.1|UNC86_CAEEL RecName: Full=Transcription factor unc-86; AltName:
Full=Uncoordinated protein 86
gi|156486|gb|AAA28158.1| unc-86 protein [Caenorhabditis elegans]
Length = 467
Score = 185 bits (470), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 288 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 347
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 348 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 407
Query: 137 R 137
R
Sbjct: 408 R 408
>gi|348020107|gb|AEP43995.1| POU domain class 4 transcription factor 3 [Craspedacusta sowerbyi]
Length = 341
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWL+EAE +
Sbjct: 206 GVTQADVGAALAHLKLPGVGSLSQSTICRFESLTLSHNNMMALKPVLSAWLDEAERANRM 265
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K +D + LP +KKRKRTSI A EKRSLEAYFA+QPRPS +KIAAIAEKLDL KNVV
Sbjct: 266 KAKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAMQPRPSSDKIAAIAEKLDLSKNVV 322
Query: 137 R 137
R
Sbjct: 323 R 323
>gi|221114520|ref|XP_002158636.1| PREDICTED: POU domain, class 4, transcription factor 2-like isoform
1 [Hydra magnipapillata]
Length = 302
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWL+EAE +
Sbjct: 167 GVTQADVGTALAHLKLPGVGSLSQSTICRFESLTLSHNNMMALKPVLSAWLDEAERANRM 226
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K +D + LP +KKRKRTSI A EKRSLEAYFA+QPRPS +KIAAIAEKLDL KNVV
Sbjct: 227 KSKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAMQPRPSSDKIAAIAEKLDLSKNVV 283
Query: 137 R 137
R
Sbjct: 284 R 284
>gi|2245514|gb|AAB62538.1| class IV POU protein [Herdmania curvata]
Length = 422
Score = 184 bits (468), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 102/121 (84%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQ +VG+ALA LKLPGVG+LSQSTICRFESLTLSHNNM+ALKPIL WLE+AEA+ +
Sbjct: 284 GVTQCNVGQALAKLKLPGVGSLSQSTICRFESLTLSHNNMVALKPILMTWLEQAEAEYRR 343
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D EKKRKRTSIAAPEKRSLEAYF++QPRPS EKIAAIA+KLDLKKNVV
Sbjct: 344 KMEDSG------LAEKKRKRTSIAAPEKRSLEAYFSLQPRPSSEKIAAIADKLDLKKNVV 397
Query: 137 R 137
R
Sbjct: 398 R 398
>gi|284026530|gb|ADB66165.1| Brn-3-like protein [Aurelia sp. 1 NN-2010a]
Length = 277
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWLEEAE +
Sbjct: 151 GVTQADVGSALAHLKLPGVGSLSQSTICRFESLTLSHNNMMALKPVLLAWLEEAEKAHRM 210
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D + LP +KKRKRTSI A EKRSLEAYFA+QPRPS +KIAAIAEKLDL KNVV
Sbjct: 211 KSND---SAFLPNQDKKRKRTSIGAAEKRSLEAYFAMQPRPSSDKIAAIAEKLDLSKNVV 267
Query: 137 R 137
R
Sbjct: 268 R 268
>gi|348020105|gb|AEP43994.1| POU domain class 4 transcription factor 2 [Craspedacusta sowerbyi]
Length = 296
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/121 (76%), Positives = 103/121 (85%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALA+LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWL+EAE +
Sbjct: 161 GVTQADVGAALAHLKLPGVGSLSQSTICRFESLTLSHNNMMALKPVLSAWLDEAERANRI 220
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K +D + LP +KKRKRTSI A EKRSLEAYFA+QPRPS +KIAAIAEKLDL KNVV
Sbjct: 221 KAKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAMQPRPSSDKIAAIAEKLDLSKNVV 277
Query: 137 R 137
R
Sbjct: 278 R 278
>gi|348020103|gb|AEP43993.1| POU domain class 4 transcription factor 1 [Craspedacusta sowerbyi]
Length = 321
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/126 (72%), Positives = 103/126 (81%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R+ G TQ DVG ALA+LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWL+EAE
Sbjct: 181 RIRLLGYTQDDVGAALAHLKLPGVGSLSQSTICRFESLTLSHNNMMALKPVLSAWLDEAE 240
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K +D + LP +KKRKRTSI A EKRSLEAYFA+QPRPS +KIAAIAEKLDL
Sbjct: 241 GANRMKAKD---SAFLPNADKKRKRTSIGAAEKRSLEAYFAMQPRPSSDKIAAIAEKLDL 297
Query: 132 KKNVVR 137
KNVVR
Sbjct: 298 SKNVVR 303
>gi|355701045|gb|EHH29066.1| Brain-specific homeobox/POU domain protein 3A, partial [Macaca
mulatta]
Length = 202
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/110 (82%), Positives = 96/110 (87%), Gaps = 3/110 (2%)
Query: 28 ANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVL 87
ANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K P+ +
Sbjct: 77 ANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPE---LF 133
Query: 88 PAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 134 NGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVR 183
>gi|443691526|gb|ELT93355.1| hypothetical protein CAPTEDRAFT_137474 [Capitella teleta]
Length = 194
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/127 (74%), Positives = 104/127 (81%), Gaps = 3/127 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG AL LKLPGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWLEEAE
Sbjct: 47 RRIKLGVTQADVGNALGKLKLPGVGSLSQSTICRFESLTLSHNNMVALKPVLLAWLEEAE 106
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
A+ + + A GE+KRKRTSIAAPEKRSLEAYF +QPRPSGEKIA IA+KLD
Sbjct: 107 KTAREAK--AAGGDLFGANGERKRKRTSIAAPEKRSLEAYFTIQPRPSGEKIAQIADKLD 164
Query: 131 LKKNVVR 137
LKKNVVR
Sbjct: 165 LKKNVVR 171
>gi|156401033|ref|XP_001639096.1| predicted protein [Nematostella vectensis]
gi|156226222|gb|EDO47033.1| predicted protein [Nematostella vectensis]
Length = 156
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 102/121 (84%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWLEEAE K
Sbjct: 21 GVTQADVGSALAHLKIPGVGSLSQSTICRFESLTLSHNNMMALKPVLTAWLEEAEKAYKT 80
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K+ + + LP +KKRKRTSI A EKRSLEAYFA+ PRPS +KIA+IAEKLDL KNVV
Sbjct: 81 KQCN---SAFLPNSDKKRKRTSIGAAEKRSLEAYFAMNPRPSSDKIASIAEKLDLSKNVV 137
Query: 137 R 137
R
Sbjct: 138 R 138
>gi|440808044|gb|AGC24165.1| Brn3, partial [Aplysia californica]
Length = 111
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/114 (79%), Positives = 99/114 (86%), Gaps = 3/114 (2%)
Query: 24 GKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA 83
G ALANLK+PGVG LSQSTICRFESLTLSHNNMIALKPILQ WLE+AE QA+ ++ + +
Sbjct: 1 GAALANLKIPGVGCLSQSTICRFESLTLSHNNMIALKPILQTWLEDAEKQARERKAELEN 60
Query: 84 PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
G+KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDLKKNVVR
Sbjct: 61 GL---GGDKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIARIAEKLDLKKNVVR 111
>gi|440808042|gb|AGC24164.1| Brn3, partial [Lymnaea stagnalis]
Length = 111
Score = 179 bits (453), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/114 (79%), Positives = 99/114 (86%), Gaps = 3/114 (2%)
Query: 24 GKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA 83
G ALANLK+PGVG LSQSTICRFESLTLSHNNMIALKPILQ WLE+AE QA+ ++ + +
Sbjct: 1 GAALANLKIPGVGCLSQSTICRFESLTLSHNNMIALKPILQTWLEDAEKQARERKAELEN 60
Query: 84 PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
G+KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA IAEKLDLKKNVVR
Sbjct: 61 GL---NGDKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAQIAEKLDLKKNVVR 111
>gi|3355755|emb|CAA49382.1| transcription factor [Girardia tigrina]
Length = 285
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/118 (76%), Positives = 101/118 (85%), Gaps = 2/118 (1%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKAL NLKL GVG+LSQSTICRFESLTLSHNNM+ALKPILQAWLEEAE QA
Sbjct: 170 GVTQADVGKALGNLKLSGVGSLSQSTICRFESLTLSHNNMVALKPILQAWLEEAERQAAE 229
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ ++PD + + ++KRKRTSI EKRSLEAYFAVQPRPS EKIA IA+KL+LKKN
Sbjct: 230 RLKNPDIYN--DSLDRKRKRTSITDAEKRSLEAYFAVQPRPSSEKIAQIADKLNLKKN 285
>gi|410947572|ref|XP_003980518.1| PREDICTED: POU domain, class 4, transcription factor 1 [Felis
catus]
Length = 257
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/110 (80%), Positives = 95/110 (86%), Gaps = 3/110 (2%)
Query: 28 ANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVL 87
+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K P+ +
Sbjct: 132 GHLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREKMNKPE---LF 188
Query: 88 PAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 189 NGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVR 238
>gi|297274894|ref|XP_002800899.1| PREDICTED: POU domain, class 4, transcription factor 1-like,
partial [Macaca mulatta]
Length = 124
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/108 (82%), Positives = 94/108 (87%), Gaps = 3/108 (2%)
Query: 30 LKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA 89
LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +R + P +
Sbjct: 1 LKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGA---QREKMNKPELFNG 57
Query: 90 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 58 GEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVR 105
>gi|327267909|ref|XP_003218741.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1-like [Anolis carolinensis]
Length = 354
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 99/121 (81%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GV Q D+ + ++K+ VG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE +
Sbjct: 218 GVIQDDLARRSPHIKIHRVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQRE 277
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 278 KMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 334
Query: 137 R 137
R
Sbjct: 335 R 335
>gi|22023894|gb|AAM89246.1|AF526420_1 class IV POU-domain transcription factor Brn-3.1 [Serinus canaria]
Length = 239
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/115 (76%), Positives = 96/115 (83%), Gaps = 3/115 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE
Sbjct: 128 RRIKLGVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAE 187
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ K P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIA
Sbjct: 188 RAQREKMTKPE---IYTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIA 239
>gi|196005025|ref|XP_002112379.1| class IV POU transcription factor gene brn-3c product [Trichoplax
adhaerens]
gi|190584420|gb|EDV24489.1| class IV POU transcription factor gene brn-3c product, partial
[Trichoplax adhaerens]
Length = 154
Score = 175 bits (443), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/123 (71%), Positives = 103/123 (83%), Gaps = 2/123 (1%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG AL NLK+ GVG LSQSTICRFESLTLSHNNM+ALKP+L AWLE+AE K+
Sbjct: 32 GVTQADVGAALGNLKIAGVGCLSQSTICRFESLTLSHNNMMALKPVLAAWLEKAEEVYKS 91
Query: 77 KRRDPDAP-SVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
K+ + +++P +KKRKRTSIAA EKR+LEAYFA++PRPS EKIA IAEKLDL+KN
Sbjct: 92 KQMSGNCDNTIIPQRSDKKRKRTSIAAMEKRALEAYFAIEPRPSSEKIAIIAEKLDLQKN 151
Query: 135 VVR 137
VVR
Sbjct: 152 VVR 154
>gi|12024867|gb|AAG45671.1|AF153701_1 class IV POU domain protein 1 [Lumbricus terrestris]
Length = 113
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/112 (76%), Positives = 98/112 (87%), Gaps = 1/112 (0%)
Query: 26 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAKNKRRDPDAP 84
AL LK+PGVG+LSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE ++ +N+ R+
Sbjct: 2 ALGKLKIPGVGSLSQSTICRFESLTLSHNNMVALKPVLQAWLEEAEKSRMENRLRNELFN 61
Query: 85 SVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
P G+KKRKRTSIAAPEKRSLEAYFA+QPRPSGEKIA IA+KLDLKKNVV
Sbjct: 62 GTGPGGDKKRKRTSIAAPEKRSLEAYFAIQPRPSGEKIAQIADKLDLKKNVV 113
>gi|256072096|ref|XP_002572373.1| pou4/brn-3 [Schistosoma mansoni]
gi|353231860|emb|CCD79215.1| putative pou4/brn-3 [Schistosoma mansoni]
Length = 695
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 89/126 (70%), Positives = 105/126 (83%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKAL NLK+ GVG+LSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE
Sbjct: 544 RRIKLGVTQADVGKALGNLKISGVGSLSQSTICRFESLTLSHNNMVALKPVLQAWLEEAE 603
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A+A ++ P+ + E++RKRTSI EKRSLEA+F++QPRPS EKIA IAEKL+L
Sbjct: 604 AEASSRLNHPNIYDL--DEERRRKRTSITDSEKRSLEAFFSIQPRPSSEKIAQIAEKLNL 661
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 662 KKNVVR 667
>gi|195478798|ref|XP_002100657.1| GE16054 [Drosophila yakuba]
gi|194188181|gb|EDX01765.1| GE16054 [Drosophila yakuba]
Length = 218
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/82 (100%), Positives = 82/82 (100%)
Query: 56 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 115
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 106 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 165
Query: 116 RPSGEKIAAIAEKLDLKKNVVR 137
RPSGEKIAAIAEKLDLKKNVVR
Sbjct: 166 RPSGEKIAAIAEKLDLKKNVVR 187
>gi|410932861|ref|XP_003979811.1| PREDICTED: brain-specific homeobox/POU domain protein 3-like
[Takifugu rubripes]
Length = 162
Score = 166 bits (419), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/106 (78%), Positives = 90/106 (84%), Gaps = 3/106 (2%)
Query: 32 LPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGE 91
+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE + K P+ + +
Sbjct: 41 IPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERVQREKMAKPE---IFNGAD 97
Query: 92 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 98 KKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVR 143
>gi|195130217|ref|XP_002009549.1| GI15417 [Drosophila mojavensis]
gi|193907999|gb|EDW06866.1| GI15417 [Drosophila mojavensis]
Length = 180
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 80/83 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 98 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 157
Query: 72 AQAKNKRRDPDAPSVLPAGEKKR 94
AQAKNKRRDPDAPSVLPAGEKKR
Sbjct: 158 AQAKNKRRDPDAPSVLPAGEKKR 180
>gi|195163858|ref|XP_002022766.1| GL14745 [Drosophila persimilis]
gi|194104789|gb|EDW26832.1| GL14745 [Drosophila persimilis]
Length = 168
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/83 (95%), Positives = 80/83 (96%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 86 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 145
Query: 72 AQAKNKRRDPDAPSVLPAGEKKR 94
AQAKNKRRDPDAPSVLPAGEKKR
Sbjct: 146 AQAKNKRRDPDAPSVLPAGEKKR 168
>gi|307188514|gb|EFN73251.1| Inhibitory POU protein [Camponotus floridanus]
Length = 101
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/82 (100%), Positives = 82/82 (100%)
Query: 56 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 115
MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 1 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 60
Query: 116 RPSGEKIAAIAEKLDLKKNVVR 137
RPSGEKIAAIAEKLDLKKNVVR
Sbjct: 61 RPSGEKIAAIAEKLDLKKNVVR 82
>gi|358340300|dbj|GAA34699.2| POU domain class 4 transcription factor 2 [Clonorchis sinensis]
Length = 835
Score = 161 bits (408), Expect = 7e-38, Method: Composition-based stats.
Identities = 93/126 (73%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKAL NLK+ GVG+LSQSTICRFESLTLSHNNM+ALKP+LQAWLEEAE
Sbjct: 684 RRIKLGVTQADVGKALGNLKIAGVGSLSQSTICRFESLTLSHNNMVALKPVLQAWLEEAE 743
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A+A K R P+ EK+RKRTSI EKRSLEA+F+VQPRPS EKIA IAEKL+L
Sbjct: 744 AEAAEKLRHPEIYDA--EEEKRRKRTSITDSEKRSLEAFFSVQPRPSSEKIAQIAEKLNL 801
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 802 KKNVVR 807
>gi|297481206|ref|XP_002691957.1| PREDICTED: POU domain, class 4, transcription factor 1 [Bos taurus]
gi|296481697|tpg|DAA23812.1| TPA: POU domain, class 4, transcription factor 1-like [Bos taurus]
Length = 126
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/102 (80%), Positives = 85/102 (83%), Gaps = 3/102 (2%)
Query: 36 GALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRK 95
G QSTICRFESLTLSHNNMIALKPILQAWLEEAE +R + P + GEKKRK
Sbjct: 9 GGSDQSTICRFESLTLSHNNMIALKPILQAWLEEAEGA---QREKMNKPELFNGGEKKRK 65
Query: 96 RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
RTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 66 RTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVR 107
>gi|22023900|gb|AAM89249.1|AF526423_1 class IV POU-domain transcription factor Brn-3.2 [Serinus canaria]
Length = 111
Score = 158 bits (399), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/100 (81%), Positives = 84/100 (84%), Gaps = 3/100 (3%)
Query: 38 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 97
SQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P + EKKRKRT
Sbjct: 1 FSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLAKPELFSGAEKKRKRT 57
Query: 98 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
SIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 58 SIAAPEKRSLEAYFALQPRPSSEKIAAIAEKLDLKKNVVR 97
>gi|22023892|gb|AAM89245.1|AF526419_1 class IV POU-domain transcription factor Brn-3.2 [Gallus gallus]
Length = 244
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/104 (76%), Positives = 86/104 (82%), Gaps = 3/104 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 133 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 192
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 115
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QP
Sbjct: 193 ---KSHREKLAKPELFSGAEKKRKRTSIAAPEKRSLEAYFALQP 233
>gi|12024865|gb|AAG45670.1|AF153700_1 class IV POU domain protein 2 [Condylactis gigantea]
Length = 110
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/112 (71%), Positives = 93/112 (83%), Gaps = 4/112 (3%)
Query: 26 ALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPS 85
ALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKP+L AWLEEAE K K+ + +
Sbjct: 2 ALAHLKIPGVGSLSQSTICRFESLTLSHNNMMALKPVLTAWLEEAEKAYKTKQMN---SA 58
Query: 86 VLP-AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
LP + +KKRKRTSI A EKRSLEAYFA+ PRPS +KIA+I EKLDL KNVV
Sbjct: 59 FLPNSSDKKRKRTSIGAAEKRSLEAYFAMNPRPSSDKIASIEEKLDLSKNVV 110
>gi|449498733|ref|XP_004177291.1| PREDICTED: LOW QUALITY PROTEIN: brain-specific homeobox/POU domain
protein 3-like [Taeniopygia guttata]
Length = 311
Score = 155 bits (391), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/110 (70%), Positives = 88/110 (80%), Gaps = 3/110 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG L+QSTICRFESLTLSHNNM+ALKPIL+AWLEEA+ +
Sbjct: 205 GVTQADVGSALANLKIPGVGCLNQSTICRFESLTLSHNNMVALKPILEAWLEEAD---RA 261
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+R P + G+KKRKRTSIAAP+KRSLEAYF RPS EK AIA
Sbjct: 262 QREKMTIPEIYTGGDKKRKRTSIAAPKKRSLEAYFPRPARPSXEKTPAIA 311
>gi|312093845|ref|XP_003147825.1| hypothetical protein LOAG_12263 [Loa loa]
Length = 240
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/95 (75%), Positives = 80/95 (84%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 145 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEVTKT 204
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYF 111
K DA +LP +KKRKRTSIAAPEKR LE YF
Sbjct: 205 KDIAGDAQGILPNMDKKRKRTSIAAPEKRLLEDYF 239
>gi|349584659|dbj|BAL03082.1| abnormal chemosensory jump 6, isoform F [Bombyx mori]
Length = 146
Score = 144 bits (363), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/80 (91%), Positives = 74/80 (92%)
Query: 58 ALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 117
+ P AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP
Sbjct: 48 SWSPRHNAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 107
Query: 118 SGEKIAAIAEKLDLKKNVVR 137
SGEKI AIAEKLDLKKNVVR
Sbjct: 108 SGEKITAIAEKLDLKKNVVR 127
>gi|91086791|ref|XP_973307.1| PREDICTED: similar to ADAMTS-like protein 4 precursor (ADAMTSL-4)
(Thrombospondin repeat-containing protein 1) [Tribolium
castaneum]
Length = 844
Score = 143 bits (360), Expect = 3e-32, Method: Composition-based stats.
Identities = 71/73 (97%), Positives = 72/73 (98%)
Query: 64 QAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+AWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA
Sbjct: 187 KAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 246
Query: 124 AIAEKLDLKKNVV 136
AIAEKLDLKKN V
Sbjct: 247 AIAEKLDLKKNSV 259
>gi|14719301|gb|AAK73123.1| Pou4f2 [Danio rerio]
Length = 82
Score = 135 bits (339), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/85 (78%), Positives = 72/85 (84%), Gaps = 3/85 (3%)
Query: 34 GVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKK 93
GVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R + P + EKK
Sbjct: 1 GVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLNKPELFNGAEKK 57
Query: 94 RKRTSIAAPEKRSLEAYFAVQPRPS 118
RKRTSIAAPEKRSLEAYFA+QPRPS
Sbjct: 58 RKRTSIAAPEKRSLEAYFAIQPRPS 82
>gi|452416|emb|CAA82736.1| Brn-3R [Mus musculus]
Length = 88
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/92 (77%), Positives = 74/92 (80%), Gaps = 4/92 (4%)
Query: 39 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTS 98
SQSTICRFESLTLSHNNMIALKPILQAWLEEAE K+ R P + EKKR TS
Sbjct: 1 SQSTICRFESLTLSHNNMIALKPILQAWLEEAE---KSHREKLTKPELFNGAEKKR-NTS 56
Query: 99 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
IAAPEK SLEAYFA+QPRPS EKIAAIAEKLD
Sbjct: 57 IAAPEKASLEAYFAIQPRPSSEKIAAIAEKLD 88
>gi|358337775|dbj|GAA34402.2| POU domain transcription factor class 4 [Clonorchis sinensis]
Length = 460
Score = 126 bits (317), Expect = 3e-27, Method: Composition-based stats.
Identities = 68/139 (48%), Positives = 93/139 (66%), Gaps = 13/139 (9%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLE--E 69
R + GVTQA+VG+AL L++ G G LSQSTICRFESLTLSHNNM+ LKPIL+ WL+ E
Sbjct: 291 RRMKLGVTQAEVGRALGCLQIGGFGCLSQSTICRFESLTLSHNNMLVLKPILEEWLDIVE 350
Query: 70 AEAQAKNKRRDPDAPSVLPA-----------GEKKRKRTSIAAPEKRSLEAYFAVQPRPS 118
E + + R ++ + +++R+RTSI PEK LEAYF QP+PS
Sbjct: 351 REHEQRQLTRTIGQDDIVESEYYSEEMRFYGTDRRRRRTSITDPEKHLLEAYFQTQPKPS 410
Query: 119 GEKIAAIAEKLDLKKNVVR 137
+++A IA+++ L+KNVVR
Sbjct: 411 TDELALIADRIKLRKNVVR 429
>gi|149050149|gb|EDM02473.1| rCG37080 [Rattus norvegicus]
Length = 98
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 65/82 (79%), Positives = 68/82 (82%), Gaps = 3/82 (3%)
Query: 56 MIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQP 115
MIALKPILQAWLEEAE +R + P + GEKKRKRTSIAAPEKRSLEAYFAVQP
Sbjct: 1 MIALKPILQAWLEEAEGA---QREKMNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQP 57
Query: 116 RPSGEKIAAIAEKLDLKKNVVR 137
RPS EKIAAIAEKLDLKKNVVR
Sbjct: 58 RPSSEKIAAIAEKLDLKKNVVR 79
>gi|371786481|emb|CBY77549.1| POU-IV, partial [Pecten maximus]
Length = 205
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/67 (86%), Positives = 61/67 (91%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 129 RRIKLGVTQADVGNALANLKLPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 188
Query: 72 AQAKNKR 78
QA+ KR
Sbjct: 189 EQAREKR 195
>gi|371786485|emb|CBY77551.1| POU-IV b, partial [Pecten maximus]
Length = 192
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/59 (93%), Positives = 57/59 (96%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
GVTQADVG ALANLKLPGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE QA+
Sbjct: 134 GVTQADVGNALANLKLPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKQAR 192
>gi|354499674|ref|XP_003511933.1| PREDICTED: POU domain, class 4, transcription factor 2-like
[Cricetulus griseus]
Length = 309
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 60/67 (89%), Gaps = 2/67 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA-- 74
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 185 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEKSPPR 244
Query: 75 KNKRRDP 81
KN++R P
Sbjct: 245 KNEQRLP 251
>gi|344256487|gb|EGW12591.1| POU domain, class 4, transcription factor 2 [Cricetulus griseus]
Length = 207
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 52/55 (94%), Positives = 54/55 (98%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 129 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 183
>gi|14587223|gb|AAK70502.1|AF390075_1 homeodomain protein BRN3A [Rattus norvegicus]
Length = 73
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/76 (77%), Positives = 62/76 (81%), Gaps = 3/76 (3%)
Query: 62 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 121
ILQAWLEEAE + K + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EK
Sbjct: 1 ILQAWLEEAEGAQREKM---NKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEK 57
Query: 122 IAAIAEKLDLKKNVVR 137
IAAIAEKLDLKKNVVR
Sbjct: 58 IAAIAEKLDLKKNVVR 73
>gi|410932012|ref|XP_003979388.1| PREDICTED: POU domain, class 4, transcription factor 2-like,
partial [Takifugu rubripes]
Length = 248
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/55 (92%), Positives = 54/55 (98%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
GVTQADVG ALA+LK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 192 GVTQADVGAALASLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 246
>gi|256070415|ref|XP_002571538.1| transcription factor (fragment) [Schistosoma mansoni]
gi|350645321|emb|CCD59944.1| pou4/brn-3, putative [Schistosoma mansoni]
Length = 380
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 35/156 (22%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA---- 72
G+TQA+VG+AL L L G G LSQSTICRFESL+LSH NM+ALKP+L+ WL++ E
Sbjct: 200 GITQAEVGRALGTLNLSGFGCLSQSTICRFESLSLSHKNMLALKPVLELWLQQVEGGLWV 259
Query: 73 -------QAKN----------------KRRDPDAPSVLP-------AGEKKRKRTSIAAP 102
++ N +P LP ++RKRT I
Sbjct: 260 NQEHRLQESHNYFNRTSTGSTDSFRNSSNSSTKSPVFLPFTPLKKSVESQRRKRTCIMGK 319
Query: 103 EKRSLEAYF-AVQPRPSGEKIAAIAEKLDLKKNVVR 137
EK LE+YF A RP+ +++ +A +L++ KNV+R
Sbjct: 320 EKYILESYFNATDCRPTSDQMNELALRLNMPKNVIR 355
>gi|14587225|gb|AAK70503.1|AF390076_1 Homeodomain protein BRN3B [Rattus norvegicus]
Length = 73
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/76 (76%), Positives = 61/76 (80%), Gaps = 3/76 (3%)
Query: 62 ILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEK 121
ILQAWLEEAE K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EK
Sbjct: 1 ILQAWLEEAE---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEK 57
Query: 122 IAAIAEKLDLKKNVVR 137
IAAIAEKLDLKKNVVR
Sbjct: 58 IAAIAEKLDLKKNVVR 73
>gi|195439744|ref|XP_002067719.1| GK12556 [Drosophila willistoni]
gi|194163804|gb|EDW78705.1| GK12556 [Drosophila willistoni]
Length = 729
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ +
Sbjct: 256 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS 312
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE +F QP+PS ++I+++A+ L L+K V
Sbjct: 313 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEISSLADSLQLEKEV 368
Query: 136 VR 137
VR
Sbjct: 369 VR 370
>gi|322367798|gb|ADW95821.1| POU domain protein [Sesamia nonagrioides]
Length = 141
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ +
Sbjct: 13 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS 69
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L L+K V
Sbjct: 70 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEV 125
Query: 136 VR 137
VR
Sbjct: 126 VR 127
>gi|301625653|ref|XP_002942017.1| PREDICTED: POU domain, class 5, transcription factor 1.2-like
[Xenopus (Silurana) tropicalis]
Length = 445
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 6/131 (4%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAW 66
D+ + + G TQADVG AL L G SQ+TICRFESL LS NM LKP+L++W
Sbjct: 236 DLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKLKPLLRSW 291
Query: 67 LEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
L E E +N + ++P +K++ RTSI KR+LE YF P+PS ++IA IA
Sbjct: 292 LHEVENN-ENLQEIISRGQIIPQVQKRKHRTSIENNVKRTLETYFMQCPKPSAQEIAQIA 350
Query: 127 EKLDLKKNVVR 137
+L+++K+VVR
Sbjct: 351 RELNMEKDVVR 361
>gi|242025066|ref|XP_002432947.1| POU-domain protein CF1A, putative [Pediculus humanus corporis]
gi|212518456|gb|EEB20209.1| POU-domain protein CF1A, putative [Pediculus humanus corporis]
Length = 301
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/127 (47%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 111 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 167
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++IA++A+ L
Sbjct: 168 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFLKQPKPSAQEIASLADGLQ 223
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 224 LEKEVVR 230
>gi|198463489|ref|XP_001352840.2| GA10024 [Drosophila pseudoobscura pseudoobscura]
gi|198151278|gb|EAL30341.2| GA10024 [Drosophila pseudoobscura pseudoobscura]
Length = 729
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 244 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 300
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I+++A+ L
Sbjct: 301 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEISSLADSLQ 356
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 357 LEKEVVR 363
>gi|7716|emb|CAA36496.1| CF1a protein (C-term.) [Drosophila melanogaster]
gi|226748|prf||1604414A POU domain protein
Length = 343
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 147 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 203
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 204 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 259
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 260 LEKEVVR 266
>gi|17737539|ref|NP_523948.1| ventral veins lacking, isoform A [Drosophila melanogaster]
gi|27735164|sp|P16241.5|CF1A_DROME RecName: Full=POU domain protein CF1A; AltName: Full=Chorion factor
1A; Short=CF1-A; AltName: Full=Protein drifter; AltName:
Full=Ventral veins lacking protein
gi|158154|gb|AAA28831.1| POU domain protein [Drosophila melanogaster]
gi|23094063|gb|AAF50641.3| ventral veins lacking, isoform A [Drosophila melanogaster]
gi|157816296|gb|ABV82142.1| FI01008p [Drosophila melanogaster]
Length = 427
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 286
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 287 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 342
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 343 LEKEVVR 349
>gi|443708520|gb|ELU03597.1| hypothetical protein CAPTEDRAFT_44575, partial [Capitella teleta]
Length = 165
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + +
Sbjct: 27 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTSGS 83
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F QP+PS ++I +A+ L L+K V
Sbjct: 84 ----PTSIDKIAAQGRKRKKRTSIEVTVKGALESHFMKQPKPSAQEITHLADSLQLEKEV 139
Query: 136 VR 137
VR
Sbjct: 140 VR 141
>gi|28317002|gb|AAO39521.1| RE27192p [Drosophila melanogaster]
Length = 427
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 286
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 287 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 342
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 343 LEKEVVR 349
>gi|405966406|gb|EKC31695.1| POU domain, class 3, transcription factor 4 [Crassostrea gigas]
Length = 413
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 193 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 249
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+P+ ++I+ +AE+L L
Sbjct: 250 STTGSTT---SIDKIAAQGRKRKKRTSIEVTVKGALENHFMKQPKPAAQEISQLAEQLQL 306
Query: 132 KKNVVR 137
+K VVR
Sbjct: 307 EKEVVR 312
>gi|14279718|gb|AAK58705.1| Vvl protein [Porcellio scaber]
Length = 133
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ +
Sbjct: 10 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS 66
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE +F QP+PS ++I +A+ L L+K V
Sbjct: 67 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITQLADSLQLEKEV 122
Query: 136 VR 137
VR
Sbjct: 123 VR 124
>gi|260784208|ref|XP_002587160.1| hypothetical protein BRAFLDRAFT_116913 [Branchiostoma floridae]
gi|229272299|gb|EEN43171.1| hypothetical protein BRAFLDRAFT_116913 [Branchiostoma floridae]
Length = 410
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + +
Sbjct: 228 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSSSGS 284
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE++F QP+PS ++IA +A+ L L+K VV
Sbjct: 285 PSS---IDKIAAQGRKRKKRTSIEVTVKGALESHFLKQPKPSAQEIAQLADSLQLEKEVV 341
Query: 137 R 137
R
Sbjct: 342 R 342
>gi|224072937|ref|XP_002190361.1| PREDICTED: POU domain, class 5, transcription factor 1.1-like
[Taeniopygia guttata]
Length = 293
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 6/131 (4%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAW 66
D+ + + G TQADVG AL L G + SQ+TICRFE+L LS NM LKP+LQ W
Sbjct: 88 DLKHKRIMLGFTQADVGLALGTL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRW 143
Query: 67 LEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
L EAE N + +A VL K+++RTSI K +LE++F +PS ++I+ IA
Sbjct: 144 LNEAE-NTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSPQEISQIA 202
Query: 127 EKLDLKKNVVR 137
E L+L K+VVR
Sbjct: 203 EDLNLDKDVVR 213
>gi|449266889|gb|EMC77875.1| POU domain, class 5, transcription factor 1, partial [Columba
livia]
Length = 207
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 6/131 (4%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAW 66
D+ + + G TQADVG AL L G + SQ+TICRFE+L LS NM LKP+LQ W
Sbjct: 2 DLKHKRIMLGFTQADVGLALGTL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRW 57
Query: 67 LEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
L EAE N + +A VL K+++RTSI K +LE++F +PS ++I+ IA
Sbjct: 58 LNEAE-NTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSPQEISQIA 116
Query: 127 EKLDLKKNVVR 137
E L+L K+VVR
Sbjct: 117 EDLNLDKDVVR 127
>gi|14279716|gb|AAK58704.1| VvlC protein [Steatoda triangulosa]
Length = 133
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 10 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLAKWLEEADSTTGS 66
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P A + A G K++KRTSI K +LE +F QP+PS ++IA++A+ L L+K V
Sbjct: 67 ----PTAIDKIAAQGRKRKKRTSIEVSVKGALENHFHKQPKPSAQEIASLADSLQLEKEV 122
Query: 136 VR 137
VR
Sbjct: 123 VR 124
>gi|225543476|ref|NP_001139385.1| ventral vein lacking [Tribolium castaneum]
gi|270008227|gb|EFA04675.1| ventral veins lacking [Tribolium castaneum]
Length = 400
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 209 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 265
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I+++A+ L L
Sbjct: 266 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEISSLADSLQL 322
Query: 132 KKNVVR 137
+K VVR
Sbjct: 323 EKEVVR 328
>gi|20384894|gb|AAL85498.1| transcription factor AmphiBrn1/2/4 [Branchiostoma floridae]
Length = 410
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ + +
Sbjct: 228 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSSSGS 284
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE++F QP+PS ++IA +A+ L L+K VV
Sbjct: 285 PSS---IDKIAAQGRKRKKRTSIEVTVKGALESHFLKQPKPSAQEIAQLADSLQLEKEVV 341
Query: 137 R 137
R
Sbjct: 342 R 342
>gi|312378396|gb|EFR24983.1| hypothetical protein AND_10077 [Anopheles darlingi]
Length = 866
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 75/121 (61%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ +
Sbjct: 664 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS 720
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE +F QP+PS ++I+++A+ L L+K VV
Sbjct: 721 PT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEISSLADSLQLEKEVV 777
Query: 137 R 137
R
Sbjct: 778 R 778
>gi|195588294|ref|XP_002083893.1| GD13969 [Drosophila simulans]
gi|194195902|gb|EDX09478.1| GD13969 [Drosophila simulans]
Length = 759
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 304 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 360
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 361 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 417
Query: 132 KKNVVR 137
+K VVR
Sbjct: 418 EKEVVR 423
>gi|158819067|ref|NP_001103648.1| POU domain, class 5, transcription factor 1 [Gallus gallus]
gi|116804640|gb|ABK27428.1| POU domain class 5 transcription factor 1 [Gallus gallus]
Length = 295
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 81/131 (61%), Gaps = 6/131 (4%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAW 66
D+ + + G TQADVG AL L G + SQ+TICRFE+L LS NM LKP+LQ W
Sbjct: 90 DLKHKRIMLGFTQADVGLALGTL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRW 145
Query: 67 LEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
L EAE N + +A VL K+++RTSI K +LE++F +PS ++I+ IA
Sbjct: 146 LNEAE-NTDNMQEMCNAEQVLAQARKRKRRTSIETNVKGTLESFFRKCVKPSPQEISQIA 204
Query: 127 EKLDLKKNVVR 137
E L+L K+VVR
Sbjct: 205 EDLNLDKDVVR 215
>gi|157137091|ref|XP_001663883.1| pou domain/drifter/cf-1a [Aedes aegypti]
gi|108880926|gb|EAT45151.1| AAEL003560-PA [Aedes aegypti]
Length = 408
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 211 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 267
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 268 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 323
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 324 LEKEVVR 330
>gi|170032039|ref|XP_001843890.1| pou domain/drifter/cf-1a [Culex quinquefasciatus]
gi|167871839|gb|EDS35222.1| pou domain/drifter/cf-1a [Culex quinquefasciatus]
Length = 421
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 224 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 280
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 281 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 336
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 337 LEKEVVR 343
>gi|170070202|ref|XP_001869499.1| POU domain protein CF1A [Culex quinquefasciatus]
gi|167866092|gb|EDS29475.1| POU domain protein CF1A [Culex quinquefasciatus]
Length = 408
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 211 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 267
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 268 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 323
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 324 LEKEVVR 330
>gi|383863245|ref|XP_003707092.1| PREDICTED: POU domain protein CF1A-like [Megachile rotundata]
Length = 315
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 122 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 178
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I +A+ L
Sbjct: 179 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITTLADSLQ 234
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 235 LEKEVVR 241
>gi|14279706|gb|AAK58699.1| Vvl protein [Procambarus clarkii]
gi|14279712|gb|AAK58702.1| VvlA protein [Steatoda triangulosa]
Length = 133
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 78/129 (60%), Gaps = 8/129 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 10 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLMKWLEEADSTTGS 66
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE +F QP+PS ++I +A+ L L+K V
Sbjct: 67 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITQLADSLQLEKEV 122
Query: 136 VRPINGHTR 144
VR +TR
Sbjct: 123 VRVWFCNTR 131
>gi|156362127|ref|XP_001625632.1| predicted protein [Nematostella vectensis]
gi|156212475|gb|EDO33532.1| predicted protein [Nematostella vectensis]
Length = 185
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+ N
Sbjct: 57 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD---NN 110
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE +F P+P+ ++I+A+AE L L K VV
Sbjct: 111 NGATGGVDKLATTGRKRKKRTSIEVAVKGALENHFCKSPKPTAQEISALAENLGLDKEVV 170
Query: 137 R 137
R
Sbjct: 171 R 171
>gi|307182763|gb|EFN69886.1| POU domain protein CF1A [Camponotus floridanus]
Length = 451
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 258 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 314
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 315 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 371
Query: 132 KKNVVR 137
+K VVR
Sbjct: 372 EKEVVR 377
>gi|332022106|gb|EGI62428.1| POU domain protein CF1A [Acromyrmex echinatior]
Length = 451
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 258 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 314
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 315 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 371
Query: 132 KKNVVR 137
+K VVR
Sbjct: 372 EKEVVR 377
>gi|347965218|ref|XP_315904.5| AGAP005878-PA [Anopheles gambiae str. PEST]
gi|333469386|gb|EAA11065.5| AGAP005878-PA [Anopheles gambiae str. PEST]
Length = 498
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 294 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 350
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I+ +A+ L
Sbjct: 351 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEISTLADSLQ 406
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 407 LEKEVVR 413
>gi|322784933|gb|EFZ11704.1| hypothetical protein SINV_04369 [Solenopsis invicta]
Length = 452
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 259 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 315
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 316 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 372
Query: 132 KKNVVR 137
+K VVR
Sbjct: 373 EKEVVR 378
>gi|357611143|gb|EHJ67329.1| silk gland factor 3 [Danaus plexippus]
Length = 361
Score = 102 bits (253), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 161 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 217
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 218 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 274
Query: 132 KKNVVR 137
+K VVR
Sbjct: 275 EKEVVR 280
>gi|307203991|gb|EFN82895.1| POU domain protein CF1A [Harpegnathos saltator]
Length = 454
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 261 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 317
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 318 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 374
Query: 132 KKNVVR 137
+K VVR
Sbjct: 375 EKEVVR 380
>gi|164420677|ref|NP_001037456.2| silk gland factor 3 [Bombyx mori]
gi|33088056|gb|AAP93140.1| POU-M2 [Bombyx mori]
Length = 352
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 168 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 224
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 225 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 281
Query: 132 KKNVVR 137
+K VVR
Sbjct: 282 EKEVVR 287
>gi|391347213|ref|XP_003747859.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Metaseiulus occidentalis]
Length = 442
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 224 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLAKWLEEAD 280
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F QP+PS ++IA++A+ L L
Sbjct: 281 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFHKQPKPSAQEIASLADSLQL 337
Query: 132 KKNVVR 137
+K VVR
Sbjct: 338 EKEVVR 343
>gi|2495313|sp|Q17237.1|SGF3_BOMMO RecName: Full=Silk gland factor 3; Short=SGF-3; AltName: Full=POU
domain protein M1
gi|156010|gb|AAA27841.1| POU domain protein [Bombyx mori]
Length = 351
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 167 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 223
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 224 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 280
Query: 132 KKNVVR 137
+K VVR
Sbjct: 281 EKEVVR 286
>gi|14279714|gb|AAK58703.1| VvlB protein [Steatoda triangulosa]
Length = 133
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 10 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLAKWLEEADSTTGS 66
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F QP+P+ ++IA++A+ L L+K V
Sbjct: 67 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFHKQPKPAAQEIASLADSLQLEKEV 122
Query: 136 VR 137
VR
Sbjct: 123 VR 124
>gi|40950582|gb|AAR97922.1| POU-domain transcription factor [Helicoverpa armigera]
Length = 351
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 165 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 221
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 222 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 278
Query: 132 KKNVVR 137
+K VVR
Sbjct: 279 EKEVVR 284
>gi|347965216|ref|XP_003435730.1| AGAP005878-PB [Anopheles gambiae str. PEST]
gi|333469387|gb|EGK97282.1| AGAP005878-PB [Anopheles gambiae str. PEST]
Length = 774
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 388 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 444
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I+ +A+ L L
Sbjct: 445 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEISTLADSLQL 501
Query: 132 KKNVVR 137
+K VVR
Sbjct: 502 EKEVVR 507
>gi|340719390|ref|XP_003398137.1| PREDICTED: POU domain protein CF1A-like [Bombus terrestris]
Length = 487
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 266 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 322
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I +A+ L L
Sbjct: 323 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITTLADNLQL 379
Query: 132 KKNVVR 137
+K VVR
Sbjct: 380 EKEVVR 385
>gi|66517328|ref|XP_393686.2| PREDICTED: POU domain protein CF1A-like [Apis mellifera]
gi|380017793|ref|XP_003692829.1| PREDICTED: POU domain protein CF1A-like [Apis florea]
Length = 460
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 267 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 323
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I +A+ L L
Sbjct: 324 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITTLADSLQL 380
Query: 132 KKNVVR 137
+K VVR
Sbjct: 381 EKEVVR 386
>gi|241652495|ref|XP_002411292.1| N-Oct 3 octamer DNA (ATGCAAAT) binding protein with brn-2 POU
domain, putative [Ixodes scapularis]
gi|215503922|gb|EEC13416.1| N-Oct 3 octamer DNA (ATGCAAAT) binding protein with brn-2 POU
domain, putative [Ixodes scapularis]
Length = 414
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 215 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLAKWLEEAD 271
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F QP+PS ++IA++A+ L L
Sbjct: 272 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFHKQPKPSAQEIASLADSLQL 328
Query: 132 KKNVVR 137
+K VVR
Sbjct: 329 EKEVVR 334
>gi|260791526|ref|XP_002590780.1| hypothetical protein BRAFLDRAFT_218680 [Branchiostoma floridae]
gi|229275976|gb|EEN46791.1| hypothetical protein BRAFLDRAFT_218680 [Branchiostoma floridae]
Length = 159
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 6/124 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL + LSQ+TICRFE+L LS NM LKP+LQ WLE A++
Sbjct: 24 GFTQADVGLALGTIH---GNVLSQTTICRFEALQLSFKNMCKLKPLLQKWLETADSNMSP 80
Query: 77 KRRDPD---APSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
D V+ G K++KRTSI K +LE +F QP+PS +I+ ++E L+L K
Sbjct: 81 GSLPKDEGLGGEVITPGRKRKKRTSIEVSVKGALETFFYKQPKPSAIEISQLSEGLNLDK 140
Query: 134 NVVR 137
VVR
Sbjct: 141 EVVR 144
>gi|16950568|gb|AAK26108.2|AF231942_1 class III POU protein [Haliotis asinina]
Length = 224
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 3 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 59
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS +I+ +A++L
Sbjct: 60 STTGS----PTSIDKIAAQGRKRKKRTSIEVTVKGALENHFLKQPKPSAAEISQLADQLQ 115
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 116 LEKEVVR 122
>gi|2511566|emb|CAA75353.1| APH-1 [Artemia franciscana]
Length = 388
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 186 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 242
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F Q +PS ++I A+A+ L L
Sbjct: 243 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQSKPSAQEITALADSLQL 299
Query: 132 KKNVVR 137
+K VVR
Sbjct: 300 EKEVVR 305
>gi|238625261|gb|ACR47965.1| POU HOMEO protein [Artemia sinica]
Length = 388
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 186 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 242
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F Q +PS ++I A+A+ L L
Sbjct: 243 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQSKPSAQEITALADSLQL 299
Query: 132 KKNVVR 137
+K VVR
Sbjct: 300 EKEVVR 305
>gi|224459192|gb|ACN43331.1| ventral vein lacking [Tribolium castaneum]
Length = 400
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 209 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 265
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F Q +PS ++I+++A+ L
Sbjct: 266 STTGS----PTSIDKIAAQGRKRKKRTSIEVSGKGALEQHFHKQAKPSAQEISSLADSLQ 321
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 322 LEKEVVR 328
>gi|269785105|ref|NP_001161508.1| BRN1.2.4 transcription factor [Saccoglossus kowalevskii]
gi|268053985|gb|ACY92479.1| BRN1.2.4 transcription factor [Saccoglossus kowalevskii]
Length = 414
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ +
Sbjct: 206 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGS 262
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE +F QP+P+ +I +AE L L+K VV
Sbjct: 263 PT---SIDKIAAQGRKRKKRTSIEVTVKGALENHFIKQPKPAAPEITQLAESLQLEKEVV 319
Query: 137 R 137
R
Sbjct: 320 R 320
>gi|450195|gb|AAA85032.1| POU domain protein, partial [Xenopus laevis]
Length = 236
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAW 66
D+ + + G TQADVG AL L G SQ+TICRFESL LS NM LKP+L++W
Sbjct: 88 DLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKLKPLLRSW 143
Query: 67 LEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
L E E +N + ++P +K++ RTSI + +LE YF +PS ++IA IA
Sbjct: 144 LHEVE-NNENLQEIISRGQIIPQVQKRKHRTSIEDNVRHTLENYFMQCSKPSAQEIAQIA 202
Query: 127 EKLDLKKNVVR 137
+L+++K+VVR
Sbjct: 203 RELNMEKDVVR 213
>gi|296198830|ref|XP_002746893.1| PREDICTED: POU domain, class 3, transcription factor 2 [Callithrix
jacchus]
Length = 264
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 106 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGS 162
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 163 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEV 218
Query: 136 VR 137
VR
Sbjct: 219 VR 220
>gi|449266129|gb|EMC77236.1| POU domain, class 3, transcription factor 2, partial [Columba
livia]
Length = 157
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 17 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGS 73
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 74 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEV 129
Query: 136 VR 137
VR
Sbjct: 130 VR 131
>gi|321460582|gb|EFX71623.1| putative POU transcription factor [Daphnia pulex]
Length = 506
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 58/126 (46%), Positives = 77/126 (61%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 273 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 329
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++IA++A+ L L
Sbjct: 330 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEIASLADSLQL 386
Query: 132 KKNVVR 137
+K VVR
Sbjct: 387 EKEVVR 392
>gi|214921|gb|AAA49998.1| XOCT-79, partial [Xenopus laevis]
Length = 304
Score = 98.6 bits (244), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAW 66
D+ + + G TQADVG AL L G SQ+TICRFESL LS NM LKP+L++W
Sbjct: 91 DLKHKRITMGYTQADVGYALGVL----FGKTFSQTTICRFESLQLSFKNMCKLKPLLRSW 146
Query: 67 LEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
L E E +N + ++P +K++ RTSI + +LE YF +PS ++IA IA
Sbjct: 147 LHEVE-NNENLQEIISRGQIIPQVQKRKHRTSIEDNVRHTLENYFMQCSKPSAQEIAQIA 205
Query: 127 EKLDLKKNVVR 137
+L+++K+VVR
Sbjct: 206 RELNMEKDVVR 216
>gi|348531479|ref|XP_003453236.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 2 [Oreochromis niloticus]
Length = 428
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 264 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 320
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I+++A+ L L+K V
Sbjct: 321 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEISSLADNLQLEKEV 376
Query: 136 VR 137
VR
Sbjct: 377 VR 378
>gi|444909140|ref|NP_001263306.1| POU class 3 homeobox 2 [Xenopus (Silurana) tropicalis]
gi|383210108|dbj|BAM08270.1| brain-2 [Xenopus (Silurana) tropicalis]
Length = 382
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 219 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 275
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 276 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 331
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 332 LEKEVVR 338
>gi|28277459|gb|AAH44354.1| Pou12 protein [Danio rerio]
gi|197247239|gb|AAI65334.1| Pou12 protein [Danio rerio]
Length = 434
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 264 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 320
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 321 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 376
Query: 136 VR 137
VR
Sbjct: 377 VR 378
>gi|355561921|gb|EHH18553.1| hypothetical protein EGK_15184 [Macaca mulatta]
Length = 302
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 139 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 195
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 196 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 251
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 252 LEKEVVR 258
>gi|351699031|gb|EHB01950.1| POU domain, class 3, transcription factor 2, partial
[Heterocephalus glaber]
Length = 233
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 70 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 126
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 127 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 182
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 183 LEKEVVR 189
>gi|194216281|ref|XP_001501398.2| PREDICTED: POU domain, class 3, transcription factor 2-like [Equus
caballus]
Length = 270
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 107 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 163
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 164 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 219
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 220 LEKEVVR 226
>gi|168279029|dbj|BAG11394.1| POU domain, class 3, transcription factor 2 [synthetic construct]
Length = 265
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 102 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 158
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 159 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 214
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 215 LEKEVVR 221
>gi|1730449|emb|CAA69212.1| POU domain protein [Danio rerio]
gi|2599291|gb|AAB84079.1| class III POU domain protein [Danio rerio]
Length = 428
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 264 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 320
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 321 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 376
Query: 136 VR 137
VR
Sbjct: 377 VR 378
>gi|227714|prf||1709357B Cf1-a protein
Length = 549
Score = 98.2 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 269 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 325
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 326 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 381
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 382 LEKEVVR 388
>gi|196005201|ref|XP_002112467.1| hypothetical protein TRIADDRAFT_16489 [Trichoplax adhaerens]
gi|190584508|gb|EDV24577.1| hypothetical protein TRIADDRAFT_16489, partial [Trichoplax
adhaerens]
Length = 151
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 72/122 (59%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL +L SQ+TICRFE+L LS NM LKP+L WLE+A++ N
Sbjct: 24 GYTQADVGLALGSLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEQADSNNSN 80
Query: 77 KRRDPDA-PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P A V G K++KRTSI K +LE +F Q +PS + I ++A L L K V
Sbjct: 81 ----PSAVDKVATQGRKRKKRTSIEVAVKGALENHFLKQSKPSAQDIGSLANTLQLDKEV 136
Query: 136 VR 137
VR
Sbjct: 137 VR 138
>gi|269849628|sp|P56224.2|P3F3A_DANRE RecName: Full=POU domain, class 3, transcription factor 3-A;
AltName: Full=Brain-specific homeobox/POU domain protein
1.1; Short=Brain-1.1; Short=zfBrn-1.1; AltName:
Full=Class III POU domain protein taichi; AltName:
Full=POU domain protein 12; Short=ZP-12
gi|37194901|gb|AAH58318.1| Pou12 protein [Danio rerio]
Length = 438
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 265 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 321
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 322 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 377
Query: 136 VR 137
VR
Sbjct: 378 VR 379
>gi|402867747|ref|XP_003897998.1| PREDICTED: POU domain, class 3, transcription factor 2 [Papio
anubis]
Length = 328
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 165 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 221
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 222 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 277
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 278 LEKEVVR 284
>gi|1730450|emb|CAA69213.1| POU domain protein [Danio rerio]
Length = 437
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 264 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 320
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 321 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 376
Query: 136 VR 137
VR
Sbjct: 377 VR 378
>gi|410906473|ref|XP_003966716.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 1 [Takifugu rubripes]
Length = 425
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 261 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 317
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I+++A+ L L+K V
Sbjct: 318 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEISSLADNLQLEKEV 373
Query: 136 VR 137
VR
Sbjct: 374 VR 375
>gi|426235133|ref|XP_004011545.1| PREDICTED: POU domain, class 3, transcription factor 2, partial
[Ovis aries]
Length = 222
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 64 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGS 120
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 121 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEV 176
Query: 136 VR 137
VR
Sbjct: 177 VR 178
>gi|3023404|sp|Q29087.1|PO3F3_PIG RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 1;
Short=Brain-1; Short=Brn-1
gi|552366|gb|AAA31106.1| POU-domain, partial [Sus scrofa]
Length = 131
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 9 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 65
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 66 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 121
Query: 136 VR 137
VR
Sbjct: 122 VR 123
>gi|90762056|gb|ABD97868.1| POUIII transcription factor [Acropora millepora]
Length = 389
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+ N
Sbjct: 220 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLAKWLEEAD---NN 273
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE +F P+PS ++I ++AE L L K VV
Sbjct: 274 NGAASGLDKLATQGRKRKKRTSIEVAVKGALENHFCKNPKPSAQEIGSLAENLGLDKEVV 333
Query: 137 R 137
R
Sbjct: 334 R 334
>gi|7718|emb|CAA41341.1| Pou-domain protein [Drosophila melanogaster]
Length = 549
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 269 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 325
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 326 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 382
Query: 132 KKNVVR 137
+K VVR
Sbjct: 383 EKEVVR 388
>gi|16611603|gb|AAL27274.1|AF276075_1 POU domain transcription factor brn-1 [Ambystoma mexicanum]
Length = 403
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 235 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 291
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I A+A+ L L
Sbjct: 292 SSTGSPT---SIDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAQEITALADSLQL 348
Query: 132 KKNVVR 137
+K VVR
Sbjct: 349 EKEVVR 354
>gi|390358089|ref|XP_003729178.1| PREDICTED: POU domain, class 3, transcription factor 2-B-like
[Strongylocentrotus purpuratus]
Length = 467
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 237 RRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLAKWLEEAD 293
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE F QP+PS ++I+A+A+ L L
Sbjct: 294 STSGSPT---SLDKIAAQGRKRKKRTSIEVTIKGALENAFLKQPKPSAQEISALADGLQL 350
Query: 132 KKNVVR 137
+K VVR
Sbjct: 351 EKEVVR 356
>gi|395737514|ref|XP_003776927.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 2 [Pongo abelii]
Length = 383
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 220 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 276
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 277 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 332
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 333 LEKEVVR 339
>gi|395534674|ref|XP_003775365.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 2, partial [Sarcophilus harrisii]
Length = 291
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 128 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 184
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 185 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 240
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 241 LEKEVVR 247
>gi|431838132|gb|ELK00064.1| POU domain, class 3, transcription factor 2 [Pteropus alecto]
Length = 344
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 181 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 237
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 238 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 293
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 294 LEKEVVR 300
>gi|206658|gb|AAA42041.1| class III POU protein, partial [Rattus norvegicus]
Length = 125
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 10 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 66
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 67 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 122
Query: 136 VR 137
VR
Sbjct: 123 VR 124
>gi|148673593|gb|EDL05540.1| POU domain, class 3, transcription factor 2 [Mus musculus]
Length = 312
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 149 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 205
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 206 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 261
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 262 LEKEVVR 268
>gi|109072165|ref|XP_001083202.1| PREDICTED: POU domain, class 3, transcription factor 2-like [Macaca
mulatta]
Length = 404
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 241 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 297
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 298 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 353
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 354 LEKEVVR 360
>gi|238550120|ref|NP_571177.2| POU domain, class 3, transcription factor 3-B isoform 1 [Danio
rerio]
gi|1730452|emb|CAA69214.1| POU domain protein [Danio rerio]
gi|33989457|gb|AAH56320.1| Pou23 protein [Danio rerio]
Length = 425
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 261 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 317
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 318 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 373
Query: 136 VR 137
VR
Sbjct: 374 VR 375
>gi|105463|pir||S05042 transcription factor Brn-1, brain - human (fragments)
Length = 125
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 6 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 62
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 63 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSSQEITNLADSLQLEKEV 118
Query: 136 VR 137
VR
Sbjct: 119 VR 120
>gi|190337565|gb|AAI63489.1| Pou23 protein [Danio rerio]
Length = 426
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 262 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 318
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 319 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 374
Query: 136 VR 137
VR
Sbjct: 375 VR 376
>gi|37589103|gb|AAH51699.2| POU class 3 homeobox 2 [Homo sapiens]
Length = 443
Score = 97.4 bits (241), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 280 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 336
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 337 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 392
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 393 LEKEVVR 399
>gi|301773222|ref|XP_002922031.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Ailuropoda melanoleuca]
Length = 378
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 215 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 271
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 272 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 327
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 328 LEKEVVR 334
>gi|158749604|ref|NP_742082.1| POU domain, class 3, transcription factor 2 [Rattus norvegicus]
gi|3024235|sp|P56222.1|PO3F2_RAT RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 2;
Short=Brain-2; Short=Brn-2; AltName: Full=Nervous
system-specific octamer-binding transcription factor
N-Oct-3; AltName: Full=Octamer-binding protein 7;
Short=Oct-7; AltName: Full=Octamer-binding transcription
factor 7; Short=OTF-7
Length = 445
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 282 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 338
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 339 SSSGSPT---SIDKIASQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 395
Query: 132 KKNVVR 137
+K VVR
Sbjct: 396 EKEVVR 401
>gi|157278475|ref|NP_001098339.1| POU domain protein class V transcription factor 1 [Oryzias latipes]
gi|49341552|gb|AAT64911.1| POU domain protein class V transcription factor 1 [Oryzias latipes]
Length = 469
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL NL G + SQ+TICRFE+L LS NM LKP+LQ WL+EAE ++
Sbjct: 271 GFTQADVGLALGNL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLDEAET-SE 325
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + V K+++RTS+ + +LEAYF P+P+ ++I I++ L L+++V
Sbjct: 326 NPQDMYKIERVFADTRKRKRRTSLEGAVRSALEAYFIKCPKPNTQEITHISDDLGLERDV 385
Query: 136 VR 137
VR
Sbjct: 386 VR 387
>gi|35085|emb|CAA77990.1| N-Oct 3 octamer DNA (ATGCAAAT) binding protein with brn-2 POU
domain [Homo sapiens]
Length = 443
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 280 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 336
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 337 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 393
Query: 132 KKNVVR 137
+K VVR
Sbjct: 394 EKEVVR 399
>gi|327261504|ref|XP_003215570.1| PREDICTED: POU domain, class 3, transcription factor 2-like [Anolis
carolinensis]
Length = 343
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 178 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 234
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 235 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 290
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 291 LEKEVVR 297
>gi|410896712|ref|XP_003961843.1| PREDICTED: POU domain, class 3, transcription factor 3-A-like
[Takifugu rubripes]
Length = 307
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 143 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 199
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K VV
Sbjct: 200 PT---SIDKIATQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEINSLADTLQLEKEVV 256
Query: 137 R 137
R
Sbjct: 257 R 257
>gi|194035107|ref|XP_001926276.1| PREDICTED: POU domain, class 3, transcription factor 2 [Sus scrofa]
Length = 442
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 279 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 335
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 336 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 392
Query: 132 KKNVVR 137
+K VVR
Sbjct: 393 EKEVVR 398
>gi|972767|gb|AAB59611.1| POU-domain transcription factor [Homo sapiens]
Length = 443
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 280 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 336
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 337 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 393
Query: 132 KKNVVR 137
+K VVR
Sbjct: 394 EKEVVR 399
>gi|193787887|dbj|BAG53090.1| unnamed protein product [Homo sapiens]
Length = 376
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 213 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 269
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 270 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 326
Query: 132 KKNVVR 137
+K VVR
Sbjct: 327 EKEVVR 332
>gi|149045532|gb|EDL98532.1| POU domain, class 3, transcription factor 2 [Rattus norvegicus]
Length = 445
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 282 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 338
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 339 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 395
Query: 132 KKNVVR 137
+K VVR
Sbjct: 396 EKEVVR 401
>gi|6679423|ref|NP_032925.1| POU domain, class 3, transcription factor 2 [Mus musculus]
gi|400662|sp|P31360.1|PO3F2_MOUSE RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 2;
Short=Brain-2; Short=Brn-2; AltName: Full=Nervous
system-specific octamer-binding transcription factor
N-Oct-3; AltName: Full=Octamer-binding protein 7;
Short=Oct-7; AltName: Full=Octamer-binding transcription
factor 7; Short=OTF-7
gi|200447|gb|AAA39961.1| brain-2 class III POU-domain protein [Mus musculus]
gi|225000336|gb|AAI72622.1| POU domain, class 3, transcription factor 2 [synthetic construct]
gi|225000604|gb|AAI72726.1| POU domain, class 3, transcription factor 2 [synthetic construct]
Length = 445
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 282 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 338
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 339 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 394
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 395 LEKEVVR 401
>gi|51702521|ref|NP_005595.2| POU domain, class 3, transcription factor 2 [Homo sapiens]
gi|78100757|sp|P20265.4|PO3F2_HUMAN RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=Brain-specific homeobox/POU domain protein 2;
Short=Brain-2; Short=Brn-2; AltName: Full=Nervous
system-specific octamer-binding transcription factor
N-Oct-3; AltName: Full=Octamer-binding protein 7;
Short=Oct-7; AltName: Full=Octamer-binding transcription
factor 7; Short=OTF-7
gi|119568876|gb|EAW48491.1| POU domain, class 3, transcription factor 2 [Homo sapiens]
gi|383210102|dbj|BAM08267.1| transcription factor POU3f2 Brn-2 [Pongo pygmaeus]
gi|383210104|dbj|BAM08268.1| transcription factor POU3f2 Brn-2 [Gorilla gorilla]
gi|383210106|dbj|BAM08269.1| transcription factor POU3f2 Brn-2 [Pan troglodytes]
Length = 443
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 280 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 336
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 337 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 392
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 393 LEKEVVR 399
>gi|3176108|dbj|BAA28666.1| Brain-2 gene [Anolis carolinensis]
Length = 447
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 282 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 338
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 339 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 395
Query: 132 KKNVVR 137
+K VVR
Sbjct: 396 EKEVVR 401
>gi|395851441|ref|XP_003798264.1| PREDICTED: POU domain, class 3, transcription factor 2 [Otolemur
garnettii]
Length = 438
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 275 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 331
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 332 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 388
Query: 132 KKNVVR 137
+K VVR
Sbjct: 389 EKEVVR 394
>gi|403261872|ref|XP_003923331.1| PREDICTED: POU domain, class 3, transcription factor 2, partial
[Saimiri boliviensis boliviensis]
Length = 409
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 246 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 302
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 303 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 358
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 359 LEKEVVR 365
>gi|195013239|ref|XP_001983819.1| GH15364 [Drosophila grimshawi]
gi|193897301|gb|EDV96167.1| GH15364 [Drosophila grimshawi]
Length = 442
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 249 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 305
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 306 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 362
Query: 132 KKNVVR 137
+K VVR
Sbjct: 363 EKEVVR 368
>gi|281343628|gb|EFB19212.1| hypothetical protein PANDA_010962 [Ailuropoda melanoleuca]
Length = 370
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 207 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 263
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 264 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 319
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 320 LEKEVVR 326
>gi|167859585|gb|ACA04747.1| PouI [Amphimedon queenslandica]
Length = 324
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 11/128 (8%)
Query: 11 SRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEA 70
SR + G TQ +VG+ALA++ G SQ+TICRFE+L LS+ N LKPIL+ WLEEA
Sbjct: 183 SRRVKLGYTQTNVGQALASVH--GTN-FSQTTICRFENLQLSYKNAQKLKPILEKWLEEA 239
Query: 71 EAQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
E Q + + E+ RK RT+I K LE +F VQP+PS I +A+ L
Sbjct: 240 EKQGAIQHEEESM-------ERHRKRRTTIGMSAKERLEQHFQVQPKPSSSDITKVADSL 292
Query: 130 DLKKNVVR 137
+L K V+R
Sbjct: 293 NLDKEVIR 300
>gi|327279170|ref|XP_003224330.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Anolis carolinensis]
gi|3176106|dbj|BAA28665.1| Brain-1 gene [Anolis carolinensis]
Length = 454
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 286 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 342
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 343 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 399
Query: 132 KKNVVR 137
+K VVR
Sbjct: 400 EKEVVR 405
>gi|148237842|ref|NP_001090220.1| POU domain, class 3, transcription factor 2-B [Xenopus laevis]
gi|2495308|sp|P70030.1|P3F2B_XENLA RecName: Full=POU domain, class 3, transcription factor 2-B;
AltName: Full=Transcription factor POU3-B; Short=XlPOU3B
gi|1592827|emb|CAA65283.1| POU3b [Xenopus laevis]
gi|47939678|gb|AAH72060.1| Pou3f4 protein [Xenopus laevis]
gi|169642702|gb|AAI60684.1| POU domain, class 3, transcription factor 4 [Xenopus laevis]
Length = 385
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 222 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 278
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P+ ++I ++A+ L
Sbjct: 279 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAAQEITSLADSLQ 334
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 335 LEKEVVR 341
>gi|341579644|gb|AEK81554.1| POU2 [Acipenser sinensis]
Length = 431
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/121 (46%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ WL EAE N
Sbjct: 234 GFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE-NTDN 289
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ V K+++RTS+ + +LE+YF P+P+ + I IAE L L+K+VV
Sbjct: 290 PQDMYKIERVFADSRKRKRRTSLEVTVRGALESYFIKCPKPNTQDITQIAEDLRLEKDVV 349
Query: 137 R 137
R
Sbjct: 350 R 350
>gi|410041103|ref|XP_003950948.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 2 [Pan troglodytes]
Length = 690
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 527 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 583
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 584 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 640
Query: 132 KKNVVR 137
+K VVR
Sbjct: 641 EKEVVR 646
>gi|6002569|gb|AAF00040.1| POU-box protein brain-2 [Coturnix japonica]
Length = 431
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 268 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 324
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 325 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 380
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 381 LEKEVVR 387
>gi|426354073|ref|XP_004044494.1| PREDICTED: POU domain, class 3, transcription factor 2 [Gorilla
gorilla gorilla]
Length = 464
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 301 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 357
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 358 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 414
Query: 132 KKNVVR 137
+K VVR
Sbjct: 415 EKEVVR 420
>gi|348531008|ref|XP_003453002.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Oreochromis niloticus]
Length = 418
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 254 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 310
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K VV
Sbjct: 311 PT---SIDKIATQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEINSLADTLQLEKEVV 367
Query: 137 R 137
R
Sbjct: 368 R 368
>gi|350582064|ref|XP_003481187.1| PREDICTED: POU domain, class 3, transcription factor 3-like,
partial [Sus scrofa]
Length = 364
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 201 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 257
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 258 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 313
Query: 136 VR 137
VR
Sbjct: 314 VR 315
>gi|60547301|gb|AAX23624.1| Brn-1 [Coturnix japonica]
Length = 260
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 97 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 153
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 154 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 209
Query: 136 VR 137
VR
Sbjct: 210 VR 211
>gi|269849627|sp|P31365.2|P3F2A_XENLA RecName: Full=POU domain, class 3, transcription factor 2-A;
AltName: Full=Transcription factor POU3-A; Short=XlPOU3A
gi|213625205|gb|AAI70064.1| POU domain, class 3, transcription factor 2 [Xenopus laevis]
gi|213626767|gb|AAI70066.1| POU domain, class 3, transcription factor 2 [Xenopus laevis]
Length = 382
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 219 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 275
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS +I ++A+ L
Sbjct: 276 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAPEITSLADSLQ 331
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 332 LEKEVVR 338
>gi|27370988|gb|AAH41298.1| Pou3f2 protein, partial [Xenopus laevis]
Length = 406
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 243 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 299
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS +I ++A+ L
Sbjct: 300 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAPEITSLADSLQ 355
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 356 LEKEVVR 362
>gi|440902589|gb|ELR53365.1| POU domain, class 3, transcription factor 3, partial [Bos grunniens
mutus]
Length = 197
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 35 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 91
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 92 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 147
Query: 136 VR 137
VR
Sbjct: 148 VR 149
>gi|156119461|ref|NP_001095225.1| POU domain, class 3, transcription factor 2-A [Xenopus laevis]
gi|65021|emb|CAA46047.1| POU domain protein [Xenopus laevis]
Length = 382
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 219 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 275
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS +I ++A+ L
Sbjct: 276 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAPEITSLADSLQ 331
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 332 LEKEVVR 338
>gi|348536696|ref|XP_003455832.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Oreochromis niloticus]
Length = 361
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 201 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 257
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+PS ++I+++A+ L L
Sbjct: 258 SSTGSAS---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPSAQEISSLADSLQL 314
Query: 132 KKNVVR 137
+K VVR
Sbjct: 315 EKEVVR 320
>gi|195126010|ref|XP_002007467.1| GI12964 [Drosophila mojavensis]
gi|193919076|gb|EDW17943.1| GI12964 [Drosophila mojavensis]
Length = 716
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 247 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 303
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 304 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 360
Query: 132 KKNVVR 137
+K VVR
Sbjct: 361 EKEVVR 366
>gi|395843226|ref|XP_003794396.1| PREDICTED: POU domain, class 3, transcription factor 3, partial
[Otolemur garnettii]
Length = 264
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 101 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 157
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 158 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 213
Query: 136 VR 137
VR
Sbjct: 214 VR 215
>gi|410904463|ref|XP_003965711.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Takifugu rubripes]
Length = 377
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 217 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 270
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I+ +A+ L L+K VV
Sbjct: 271 TGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEISTLADSLQLEKEVV 330
Query: 137 R 137
R
Sbjct: 331 R 331
>gi|195338005|ref|XP_002035616.1| GM14797 [Drosophila sechellia]
gi|194128709|gb|EDW50752.1| GM14797 [Drosophila sechellia]
Length = 617
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 286
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 287 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 343
Query: 132 KKNVVR 137
+K VVR
Sbjct: 344 EKEVVR 349
>gi|410931934|ref|XP_003979350.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Takifugu rubripes]
Length = 408
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 249 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 305
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 306 STTGSPT---SIDKIATQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEINSLADTLQL 362
Query: 132 KKNVVR 137
+K VVR
Sbjct: 363 EKEVVR 368
>gi|195492366|ref|XP_002093959.1| GE21576 [Drosophila yakuba]
gi|194180060|gb|EDW93671.1| GE21576 [Drosophila yakuba]
Length = 690
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 286
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 287 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 343
Query: 132 KKNVVR 137
+K VVR
Sbjct: 344 EKEVVR 349
>gi|194865646|ref|XP_001971533.1| GG14388 [Drosophila erecta]
gi|190653316|gb|EDV50559.1| GG14388 [Drosophila erecta]
Length = 690
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 286
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 287 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 343
Query: 132 KKNVVR 137
+K VVR
Sbjct: 344 EKEVVR 349
>gi|195376119|ref|XP_002046844.1| GJ13109 [Drosophila virilis]
gi|194154002|gb|EDW69186.1| GJ13109 [Drosophila virilis]
Length = 441
Score = 96.7 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 248 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 304
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 305 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 361
Query: 132 KKNVVR 137
+K VVR
Sbjct: 362 EKEVVR 367
>gi|410904341|ref|XP_003965650.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Takifugu rubripes]
Length = 475
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ WL EAE +N
Sbjct: 276 GFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCRLKPLLQKWLNEAET-TEN 331
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ V K+++RTS+ + +LEAYF P+P+ ++I I++ L L+++VV
Sbjct: 332 PQDMYKVERVFVDTRKRKRRTSLEGAVRSALEAYFIKCPKPNTQEITHISDDLGLERDVV 391
Query: 137 R 137
R
Sbjct: 392 R 392
>gi|334346780|ref|XP_001371773.2| PREDICTED: POU domain, class 3, transcription factor 3-like
[Monodelphis domestica]
Length = 521
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 353 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 409
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 410 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 465
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 466 LEKEVVR 472
>gi|431895603|gb|ELK05036.1| POU domain, class 3, transcription factor 3 [Pteropus alecto]
Length = 266
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 103 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 159
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 160 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 215
Query: 136 VR 137
VR
Sbjct: 216 VR 217
>gi|149046264|gb|EDL99157.1| rCG22262 [Rattus norvegicus]
gi|149046265|gb|EDL99158.1| POU domain, class 3, transcription factor 3 [Rattus norvegicus]
Length = 290
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 127 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 183
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 184 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 239
Query: 136 VR 137
VR
Sbjct: 240 VR 241
>gi|432931272|ref|XP_004081634.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
[Oryzias latipes]
Length = 369
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 166 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 222
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K VV
Sbjct: 223 PT---SIDKIATQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEINSLADTLQLEKEVV 279
Query: 137 R 137
R
Sbjct: 280 R 280
>gi|410904917|ref|XP_003965938.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Takifugu rubripes]
Length = 380
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 221 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 277
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS +I ++A+ L
Sbjct: 278 STSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSASEIISLADNLH 333
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 334 LEKEVVR 340
>gi|20301970|ref|NP_620192.1| POU domain, class 3, transcription factor 3 [Rattus norvegicus]
gi|5915802|sp|Q63262.2|PO3F3_RAT RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 1;
Short=Brain-1; Short=Brn-1
gi|2760445|emb|CAA04893.1| Brain-1 (Brn-1) protein [Rattus norvegicus]
Length = 497
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 334 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 390
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 391 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 446
Query: 136 VR 137
VR
Sbjct: 447 VR 448
>gi|402891796|ref|XP_003909120.1| PREDICTED: POU domain, class 3, transcription factor 3, partial
[Papio anubis]
Length = 201
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 38 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 94
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 95 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 150
Query: 136 VR 137
VR
Sbjct: 151 VR 152
>gi|119622176|gb|EAX01771.1| POU domain, class 3, transcription factor 3 [Homo sapiens]
Length = 500
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 332 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 388
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 389 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 444
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 445 LEKEVVR 451
>gi|258967|gb|AAB23967.1| XLPOU91=POU domain protein [Xenopus laevis, stage 11 embryos,
Peptide Partial, 127 aa]
Length = 127
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADV AL L G SQ+TICRFESL LS NM LKP+L++WL E E +
Sbjct: 6 GYTQADVAYALGVL----FGKTFSQTTICRFESLQLSFKNMCKLKPLLRSWLHEVE-NNE 60
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + ++P +K++ RTSI K +LE YF +PS ++IA IA +L+++K+V
Sbjct: 61 NLQEIISRGQIIPQVQKRKHRTSIENNVKCTLENYFMGCSKPSAQEIAQIARELNMEKDV 120
Query: 136 VR 137
VR
Sbjct: 121 VR 122
>gi|112421036|ref|NP_032926.2| POU domain, class 3, transcription factor 3 [Mus musculus]
gi|341941381|sp|P31361.2|PO3F3_MOUSE RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 1;
Short=Brain-1; Short=Brn-1; AltName:
Full=Octamer-binding protein 8; Short=Oct-8; AltName:
Full=Octamer-binding transcription factor 8; Short=OTF-8
gi|162319502|gb|AAI56038.1| POU domain, class 3, transcription factor 3 [synthetic construct]
Length = 497
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 334 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 390
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 391 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 446
Query: 136 VR 137
VR
Sbjct: 447 VR 448
>gi|55846826|gb|AAV67417.1| pou domain class 3 transcription factor 2 [Macaca fascicularis]
Length = 125
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 6 GFTQPDVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGS 62
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 63 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEV 118
Query: 136 VR 137
VR
Sbjct: 119 VR 120
>gi|47226909|emb|CAG05801.1| unnamed protein product [Tetraodon nigroviridis]
Length = 420
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 261 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 317
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 318 STTGSPT---SIDKIATQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEINSLADTLQL 374
Query: 132 KKNVVR 137
+K VVR
Sbjct: 375 EKEVVR 380
>gi|5453936|ref|NP_006227.1| POU domain, class 3, transcription factor 3 [Homo sapiens]
gi|2506534|sp|P20264.2|PO3F3_HUMAN RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Brain-specific homeobox/POU domain protein 1;
Short=Brain-1; Short=Brn-1; AltName:
Full=Octamer-binding protein 8; Short=Oct-8; AltName:
Full=Octamer-binding transcription factor 8; Short=OTF-8
gi|1902886|dbj|BAA19459.1| Brain-1 [Homo sapiens]
gi|62630228|gb|AAX88973.1| unknown [Homo sapiens]
gi|195934807|gb|AAI68366.1| POU class 3 homeobox 3 [synthetic construct]
Length = 500
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 337 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 393
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 394 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 449
Query: 136 VR 137
VR
Sbjct: 450 VR 451
>gi|442630618|ref|NP_001163355.2| ventral veins lacking, isoform C [Drosophila melanogaster]
gi|440215385|gb|ACZ94626.2| ventral veins lacking, isoform C [Drosophila melanogaster]
Length = 713
Score = 96.3 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 286
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 287 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 343
Query: 132 KKNVVR 137
+K VVR
Sbjct: 344 EKEVVR 349
>gi|395527192|ref|XP_003765734.1| PREDICTED: POU domain, class 3, transcription factor 3 [Sarcophilus
harrisii]
Length = 311
Score = 96.3 bits (238), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 143 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 199
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 200 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 255
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 256 LEKEVVR 262
>gi|345317911|ref|XP_001518292.2| PREDICTED: POU domain, class 3, transcription factor 3-like,
partial [Ornithorhynchus anatinus]
Length = 289
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 160 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 216
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 217 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|291386169|ref|XP_002710046.1| PREDICTED: POU class 3 homeobox 3 [Oryctolagus cuniculus]
Length = 296
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 133 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 189
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE++F P+PS ++I +A+ L L+K VV
Sbjct: 190 PT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVV 246
Query: 137 R 137
R
Sbjct: 247 R 247
>gi|432880457|ref|XP_004073707.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Oryzias latipes]
Length = 361
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 200 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+PS ++I+++A+ L L
Sbjct: 257 SSTGSSSS---IDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPSAQEISSLADSLQL 313
Query: 132 KKNVVR 137
+K VVR
Sbjct: 314 EKEVVR 319
>gi|380807109|gb|AFE75430.1| POU domain, class 3, transcription factor 3, partial [Macaca
mulatta]
gi|380807111|gb|AFE75431.1| POU domain, class 3, transcription factor 3, partial [Macaca
mulatta]
Length = 288
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 133 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 189
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 190 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 245
Query: 136 VR 137
VR
Sbjct: 246 VR 247
>gi|200445|gb|AAA39960.1| Brain-1 class III POU-domain protein [Mus musculus]
Length = 495
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 327 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 383
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 384 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 439
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 440 LEKEVVR 446
>gi|47682959|gb|AAH70001.1| Pou12 protein [Danio rerio]
Length = 437
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS N+ LKP+L WLEEA++ +
Sbjct: 264 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNICKLKPLLNKWLEEADSTTGS 320
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 321 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 376
Query: 136 VR 137
VR
Sbjct: 377 VR 378
>gi|301623804|ref|XP_002941201.1| PREDICTED: POU domain, class 3, transcription factor 3-like
[Xenopus (Silurana) tropicalis]
Length = 448
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 280 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 336
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I +A+ L L
Sbjct: 337 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQL 393
Query: 132 KKNVVR 137
+K VVR
Sbjct: 394 EKEVVR 399
>gi|47209822|emb|CAF93259.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 244 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 297
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I+ +A+ L L+K VV
Sbjct: 298 TGSPTNLDKIRAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEISTLADSLQLEKEVV 357
Query: 137 R 137
R
Sbjct: 358 R 358
>gi|281349718|gb|EFB25302.1| hypothetical protein PANDA_013172 [Ailuropoda melanoleuca]
Length = 157
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ + +
Sbjct: 27 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGS 83
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE++F P+PS +I +A+ L L+K VV
Sbjct: 84 P---TNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVV 140
Query: 137 R 137
R
Sbjct: 141 R 141
>gi|348572011|ref|XP_003471788.1| PREDICTED: POU domain, class 3, transcription factor 3-like,
partial [Cavia porcellus]
Length = 303
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 135 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 191
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 192 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 247
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 248 LEKEVVR 254
>gi|395731477|ref|XP_002811766.2| PREDICTED: uncharacterized protein LOC100448372, partial [Pongo
abelii]
Length = 565
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 410 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 466
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 467 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 522
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 523 LEKEVVR 529
>gi|74273338|gb|ABA01337.1| POU domain class 3 transcription factor 4 [Ovis aries]
Length = 307
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L LSQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 166 RRIKLGFTQADVGLALGTLY---GNVLSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 222
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 223 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 279
Query: 132 KKNVVR 137
+K VVR
Sbjct: 280 EKEVVR 285
>gi|327277336|ref|XP_003223421.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Anolis
carolinensis]
gi|3176110|dbj|BAA28667.1| Brain-4 gene [Anolis carolinensis]
Length = 356
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 193 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 249
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++IAA+A+ L L
Sbjct: 250 SSTGSPT---GLDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEIAALADSLQL 306
Query: 132 KKNVVR 137
+K VVR
Sbjct: 307 EKEVVR 312
>gi|309319889|pdb|2XSD|C Chain C, Crystal Structure Of The Dimeric Oct-6 (Pou3f1) Pou Domain
Bound To Palindromic More Dna
Length = 164
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ + +
Sbjct: 30 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGS 86
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE++F P+PS +I +A+ L L+K VV
Sbjct: 87 P---TNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVV 143
Query: 137 R 137
R
Sbjct: 144 R 144
>gi|281338116|gb|EFB13700.1| hypothetical protein PANDA_001356 [Ailuropoda melanoleuca]
Length = 500
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 332 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 388
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 389 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 444
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 445 LEKEVVR 451
>gi|148698413|gb|EDL30360.1| POU domain, class 3, transcription factor 1 [Mus musculus]
Length = 270
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ + +
Sbjct: 89 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSSGS 145
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE++F P+PS +I +A+ L L+K VV
Sbjct: 146 P---TNLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEKEVV 202
Query: 137 R 137
R
Sbjct: 203 R 203
>gi|363732612|ref|XP_003641125.1| PREDICTED: POU domain, class 3, transcription factor 4-like,
partial [Gallus gallus]
Length = 213
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 70 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 126
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L L+K V
Sbjct: 127 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEV 182
Query: 136 VR 137
VR
Sbjct: 183 VR 184
>gi|18859251|ref|NP_571235.1| POU domain, class 3, transcription factor 2 [Danio rerio]
gi|2495311|sp|P79746.1|PO3F2_DANRE RecName: Full=POU domain, class 3, transcription factor 2; AltName:
Full=POU domain protein 47; Short=ZP-47
gi|1730455|emb|CAA69211.1| POU domain protein [Danio rerio]
gi|45595617|gb|AAH67373.1| Pou47 protein [Danio rerio]
gi|169153880|emb|CAQ15526.1| POU domain gene 47 [Danio rerio]
Length = 378
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 218 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 274
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P+ +I ++A+ L
Sbjct: 275 STSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEITSLADSLQ 330
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 331 LEKEVVR 337
>gi|291408748|ref|XP_002720688.1| PREDICTED: POU domain, class 3, transcription factor 1 [Oryctolagus
cuniculus]
Length = 465
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 276 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 332
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 333 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 389
Query: 132 KKNVVR 137
+K VVR
Sbjct: 390 EKEVVR 395
>gi|283820|pir||S23249 transcription factor POU2 - African clawed frog (fragment)
Length = 235
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ N
Sbjct: 83 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGN 139
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ +I ++A+ L L+K V
Sbjct: 140 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAALEITSLADSLQLEKEV 195
Query: 136 VR 137
VR
Sbjct: 196 VR 197
>gi|20301972|ref|NP_620193.1| POU domain, class 3, transcription factor 1 [Rattus norvegicus]
gi|206867|gb|AAA42118.1| SCIP [Rattus norvegicus]
Length = 451
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>gi|7106383|ref|NP_035271.1| POU domain, class 3, transcription factor 1 [Mus musculus]
gi|123404|sp|P21952.1|PO3F1_MOUSE RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=Octamer-binding protein 6; Short=Oct-6; AltName:
Full=Octamer-binding transcription factor 6;
Short=OTF-6; AltName: Full=POU domain transcription
factor SCIP
gi|49682|emb|CAA40280.1| POU-domain transcription factor [Mus musculus domesticus]
gi|53506|emb|CAA38445.1| octomer binding protein [Mus musculus]
gi|200451|gb|AAA39963.1| scip class III POU-domain protein [Mus musculus]
gi|225000344|gb|AAI72630.1| POU domain, class 3, transcription factor 1 [synthetic construct]
gi|225001034|gb|AAI72733.1| POU domain, class 3, transcription factor 1 [synthetic construct]
Length = 449
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 263 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 319
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 320 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 376
Query: 132 KKNVVR 137
+K VVR
Sbjct: 377 EKEVVR 382
>gi|53508|emb|CAA40720.1| octamer binding protein [Mus musculus]
Length = 448
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 262 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 318
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 319 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 375
Query: 132 KKNVVR 137
+K VVR
Sbjct: 376 EKEVVR 381
>gi|508990|gb|AAA59965.1| oct-6 [Homo sapiens]
Length = 448
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 262 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 318
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 319 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 375
Query: 132 KKNVVR 137
+K VVR
Sbjct: 376 EKEVVR 381
>gi|671667|emb|CAA41781.1| POU 2 transcription factor [Xenopus laevis]
Length = 218
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ N
Sbjct: 66 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGN 122
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ +I ++A+ L L+K V
Sbjct: 123 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAALEITSLADSLQLEKEV 178
Query: 136 VR 137
VR
Sbjct: 179 VR 180
>gi|157428026|ref|NP_001098921.1| POU domain, class 3, transcription factor 1 [Bos taurus]
gi|157278967|gb|AAI53280.1| POU3F1 protein [Bos taurus]
Length = 451
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>gi|402854006|ref|XP_003919516.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 1 [Papio anubis]
Length = 451
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>gi|123405|sp|P20267.2|PO3F1_RAT RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=Octamer-binding protein 6; Short=Oct-6; AltName:
Full=Octamer-binding transcription factor 6;
Short=OTF-6; AltName: Full=POU domain transcription
factor SCIP; AltName: Full=Tst-1
Length = 451
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>gi|110624765|ref|NP_002690.3| POU domain, class 3, transcription factor 1 [Homo sapiens]
gi|218512119|sp|Q03052.3|PO3F1_HUMAN RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=Octamer-binding protein 6; Short=Oct-6; AltName:
Full=Octamer-binding transcription factor 6;
Short=OTF-6; AltName: Full=POU domain transcription
factor SCIP
gi|119627703|gb|EAX07298.1| POU domain, class 3, transcription factor 1 [Homo sapiens]
gi|162318522|gb|AAI56295.1| POU class 3 homeobox 1 [synthetic construct]
Length = 451
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>gi|431891064|gb|ELK01941.1| POU domain, class 3, transcription factor 1 [Pteropus alecto]
Length = 275
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 89 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 145
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 146 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 202
Query: 132 KKNVVR 137
+K VVR
Sbjct: 203 EKEVVR 208
>gi|296488938|tpg|DAA31051.1| TPA: POU domain, class 3, transcription factor 1 [Bos taurus]
Length = 432
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>gi|359321259|ref|XP_003639548.1| PREDICTED: POU domain, class 3, transcription factor 1-like [Canis
lupus familiaris]
Length = 447
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 270 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 326
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 327 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 383
Query: 132 KKNVVR 137
+K VVR
Sbjct: 384 EKEVVR 389
>gi|350585905|ref|XP_003356366.2| PREDICTED: POU domain, class 3, transcription factor 1, partial
[Sus scrofa]
Length = 332
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 146 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 202
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 203 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 259
Query: 132 KKNVVR 137
+K VVR
Sbjct: 260 EKEVVR 265
>gi|224097364|ref|XP_002186623.1| PREDICTED: POU domain, class 3, transcription factor 4 [Taeniopygia
guttata]
Length = 220
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 68 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 124
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L L+K V
Sbjct: 125 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEV 180
Query: 136 VR 137
VR
Sbjct: 181 VR 182
>gi|126342563|ref|XP_001370024.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Monodelphis domestica]
Length = 378
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 209 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 265
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L L+K V
Sbjct: 266 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEV 321
Query: 136 VR 137
VR
Sbjct: 322 VR 323
>gi|395526596|ref|XP_003765446.1| PREDICTED: POU domain, class 3, transcription factor 1 [Sarcophilus
harrisii]
Length = 265
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 49 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 105
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 106 SSTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 162
Query: 132 KKNVVR 137
+K VVR
Sbjct: 163 EKEVVR 168
>gi|35134|emb|CAA79158.1| Oct-6 transcription factor [Homo sapiens]
Length = 398
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 212 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 269 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 325
Query: 132 KKNVVR 137
+K VVR
Sbjct: 326 EKEVVR 331
>gi|222976|dbj|BAA02377.1| POU domain protein [Danio rerio]
Length = 425
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G QADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 261 GFKQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 317
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 318 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 373
Query: 136 VR 137
VR
Sbjct: 374 VR 375
>gi|351712094|gb|EHB15013.1| POU domain, class 3, transcription factor 4 [Heterocephalus glaber]
Length = 361
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|410954584|ref|XP_003983944.1| PREDICTED: POU domain, class 3, transcription factor 3 [Felis
catus]
Length = 333
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 95 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 151
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 152 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 207
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 208 LEKEVVR 214
>gi|207540|gb|AAA42303.1| POU domain protein, partial [Rattus norvegicus]
Length = 417
Score = 95.1 bits (235), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 231 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 287
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 288 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 344
Query: 132 KKNVVR 137
+K VVR
Sbjct: 345 EKEVVR 350
>gi|332808557|ref|XP_524672.3| PREDICTED: POU domain, class 3, transcription factor 1 [Pan
troglodytes]
Length = 416
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 286
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 287 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 343
Query: 132 KKNVVR 137
+K VVR
Sbjct: 344 EKEVVR 349
>gi|47226220|emb|CAG08367.1| unnamed protein product [Tetraodon nigroviridis]
Length = 361
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 201 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 257
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+PS ++I ++A+ L L
Sbjct: 258 SSTGSSSS---IDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPSAQEITSLADTLQL 314
Query: 132 KKNVVR 137
+K VVR
Sbjct: 315 EKEVVR 320
>gi|194207669|ref|XP_001916635.1| PREDICTED: POU domain, class 3, transcription factor 1-like [Equus
caballus]
Length = 295
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 109 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 165
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 166 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 222
Query: 132 KKNVVR 137
+K VVR
Sbjct: 223 EKEVVR 228
>gi|402910674|ref|XP_003917985.1| PREDICTED: POU domain, class 3, transcription factor 4 [Papio
anubis]
Length = 338
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 181 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 237
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L
Sbjct: 238 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQ 293
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 294 LEKEVVR 300
>gi|397480973|ref|XP_003811733.1| PREDICTED: uncharacterized protein LOC100968326 [Pan paniscus]
Length = 726
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 558 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 614
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 615 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 670
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 671 LEKEVVR 677
>gi|348531477|ref|XP_003453235.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 1 [Oreochromis niloticus]
Length = 442
Score = 95.1 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 259 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 315
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I+++A+ L
Sbjct: 316 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEISSLADNLQ 371
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 372 LEKEVVR 378
>gi|410914347|ref|XP_003970649.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Takifugu rubripes]
Length = 361
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 201 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 257
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+PS ++I ++A+ L L
Sbjct: 258 SSTGSSSS---IDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPSAQEITSLADTLQL 314
Query: 132 KKNVVR 137
+K VVR
Sbjct: 315 EKEVVR 320
>gi|345488901|ref|XP_003426008.1| PREDICTED: POU domain protein CF1A-like, partial [Nasonia
vitripennis]
Length = 184
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 22 DVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDP 81
DVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA++ +
Sbjct: 1 DVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEADSSTGSPT--- 54
Query: 82 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
+ + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L+K VVR
Sbjct: 55 NIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVR 110
>gi|345778568|ref|XP_539052.3| PREDICTED: uncharacterized protein LOC481931 [Canis lupus
familiaris]
Length = 740
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 577 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 633
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 634 SSSGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 690
Query: 132 KKNVVR 137
+K VVR
Sbjct: 691 EKEVVR 696
>gi|449273145|gb|EMC82753.1| Transcription factor POU1, partial [Columba livia]
Length = 146
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ +
Sbjct: 17 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSTGS 73
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I ++A+ L L+K VV
Sbjct: 74 ---PTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQLEKEVV 130
Query: 137 R 137
R
Sbjct: 131 R 131
>gi|426257310|ref|XP_004022272.1| PREDICTED: POU domain, class 3, transcription factor 4 [Ovis aries]
Length = 363
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|284026532|gb|ADB66166.1| Pit-1-like protein, partial [Aurelia sp. 1 NN-2010a]
Length = 205
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/124 (47%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA-- 74
G TQ +VG ALA KL SQ+TICRFE+L LS+ N LKP+L+AWLE+AEA
Sbjct: 66 GYTQTNVGAALA--KLSDGTDFSQTTICRFENLQLSYKNACKLKPLLEAWLEKAEAMGVV 123
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N + E+KRK RT+I K LE YF QP+PS ++ IAE L L K
Sbjct: 124 NNDK---------SVSERKRKRRTTIGLHAKEMLERYFQRQPKPSSLEVFGIAEGLKLDK 174
Query: 134 NVVR 137
VVR
Sbjct: 175 EVVR 178
>gi|395862571|ref|XP_003803516.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Otolemur garnettii]
Length = 361
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 209 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 265
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L L+K V
Sbjct: 266 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEV 321
Query: 136 VR 137
VR
Sbjct: 322 VR 323
>gi|301755404|ref|XP_002913559.1| PREDICTED: hypothetical protein LOC100477950 [Ailuropoda
melanoleuca]
Length = 420
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 252 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 308
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 309 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 364
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 365 LEKEVVR 371
>gi|297480131|ref|XP_002691240.1| PREDICTED: uncharacterized protein LOC100337252 [Bos taurus]
gi|296482774|tpg|DAA24889.1| TPA: POU class 3 homeobox 3-like [Bos taurus]
Length = 649
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 486 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 542
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K +LE++F P+PS ++I +A+ L L+K VV
Sbjct: 543 PT---SIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVV 599
Query: 137 R 137
R
Sbjct: 600 R 600
>gi|194045025|ref|XP_001925801.1| PREDICTED: POU domain, class 3, transcription factor 4 [Sus scrofa]
Length = 361
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|432109569|gb|ELK33735.1| POU domain, class 3, transcription factor 4 [Myotis davidii]
Length = 361
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|301789327|ref|XP_002930080.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Ailuropoda melanoleuca]
gi|281354685|gb|EFB30269.1| hypothetical protein PANDA_020426 [Ailuropoda melanoleuca]
Length = 361
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|344287239|ref|XP_003415361.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 1-like [Loxodonta africana]
Length = 536
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 350 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 406
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 407 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 463
Query: 132 KKNVVR 137
+K VVR
Sbjct: 464 EKEVVR 469
>gi|76667298|ref|XP_589021.2| PREDICTED: POU domain, class 3, transcription factor 4 [Bos taurus]
gi|297492934|ref|XP_002699986.1| PREDICTED: POU domain, class 3, transcription factor 4 [Bos taurus]
gi|296470907|tpg|DAA13022.1| TPA: POU domain, class 3, transcription factor 4-like [Bos taurus]
gi|440908732|gb|ELR58719.1| POU domain, class 3, transcription factor 4 [Bos grunniens mutus]
Length = 363
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|358414345|ref|XP_001787898.2| PREDICTED: uncharacterized protein LOC526152 [Bos taurus]
Length = 937
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 769 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 825
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 826 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 881
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 882 LEKEVVR 888
>gi|431913976|gb|ELK15248.1| POU domain, class 3, transcription factor 4 [Pteropus alecto]
Length = 361
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|432907549|ref|XP_004077648.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Oryzias latipes]
Length = 404
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 244 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 300
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P+ +I ++A+ L
Sbjct: 301 STSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEIISLADNLH 356
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 357 LEKEVVR 363
>gi|390479986|ref|XP_003735823.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 4-like [Callithrix jacchus]
Length = 361
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 209 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 265
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K LE +F P+P+ ++I+++A+ L L+K VV
Sbjct: 266 PT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVV 322
Query: 137 R 137
R
Sbjct: 323 R 323
>gi|344281980|ref|XP_003412753.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Loxodonta africana]
Length = 361
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|402576763|gb|EJW70721.1| hypothetical protein WUBG_18372, partial [Wuchereria bancrofti]
Length = 246
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 94 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSS 150
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K LE +F P+P+ ++IA +A +L L+K VV
Sbjct: 151 PNSAFEKMTG-QGGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEIAQVAMELQLEKEVV 209
Query: 137 R 137
R
Sbjct: 210 R 210
>gi|332239805|ref|XP_003269089.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 3, transcription
factor 4 [Nomascus leucogenys]
Length = 394
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 237 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 293
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L
Sbjct: 294 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQ 349
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 350 LEKEVVR 356
>gi|155369223|ref|NP_001094393.1| POU domain, class 3, transcription factor 4-A [Xenopus laevis]
gi|281185477|sp|P31364.2|P3F4A_XENLA RecName: Full=POU domain, class 3, transcription factor 4-A;
AltName: Full=Transcription factor POU2; Short=XlPOU 2;
Short=XlPOU2
gi|632502|gb|AAA92684.1| transcription factor POU2 [Xenopus laevis]
gi|50368775|gb|AAH76747.1| POU 2 protein [Xenopus laevis]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ N P + + A G K++KRTSI K LE +F P+P+ +I ++A+ L
Sbjct: 261 SSTGN----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAALEITSLADSLQ 316
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 317 LEKEVVR 323
>gi|6679427|ref|NP_032927.1| POU domain, class 3, transcription factor 4 [Mus musculus]
gi|8394003|ref|NP_058948.1| POU domain, class 3, transcription factor 4 [Rattus norvegicus]
gi|50402257|sp|P62516.1|PO3F4_RAT RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4; AltName:
Full=Octamer-binding protein 9; Short=Oct-9; AltName:
Full=Octamer-binding transcription factor 9;
Short=OTF-9; AltName: Full=RHS2 class III POU protein
gi|50402535|sp|P62515.1|PO3F4_MOUSE RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4; AltName:
Full=Octamer-binding protein 9; Short=Oct-9; AltName:
Full=Octamer-binding transcription factor 9; Short=OTF-9
gi|55834|emb|CAA77855.1| brain-4 [Rattus norvegicus]
gi|200449|gb|AAA39962.1| brain-4 class III POU-domain protein [Mus musculus]
gi|206660|gb|AAA42042.1| RHS2 class III POU protein [Rattus norvegicus]
gi|148682074|gb|EDL14021.1| POU domain, class 3, transcription factor 4 [Mus musculus]
gi|148877921|gb|AAI45920.1| POU domain, class 3, transcription factor 4 [Mus musculus]
gi|149055511|gb|EDM07095.1| POU domain, class 3, transcription factor 4 [Rattus norvegicus]
gi|223460308|gb|AAI38658.1| POU domain, class 3, transcription factor 4 [Mus musculus]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|266458399|ref|NP_001158054.1| POU domain, class 3, transcription factor 1-A [Xenopus laevis]
gi|671666|emb|CAA41782.1| POU 1 transcription factor [Xenopus laevis]
Length = 356
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 193 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 249
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 250 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 306
Query: 132 KKNVVR 137
+K VVR
Sbjct: 307 EKEVVR 312
>gi|126330193|ref|XP_001364853.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Monodelphis domestica]
Length = 446
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 257 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 313
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 314 SSTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 370
Query: 132 KKNVVR 137
+K VVR
Sbjct: 371 EKEVVR 376
>gi|410988936|ref|XP_004000730.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Felis
catus]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|74199437|dbj|BAE34453.1| unnamed protein product [Mus musculus]
Length = 329
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 209 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 265
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ G K++KRTSI K LE +F P+P+ ++I+++A+ L L+K VV
Sbjct: 266 PT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQLEKEVV 322
Query: 137 R 137
R
Sbjct: 323 R 323
>gi|395853143|ref|XP_003799076.1| PREDICTED: POU domain, class 3, transcription factor 1 [Otolemur
garnettii]
Length = 434
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 248 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 304
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 305 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 361
Query: 132 KKNVVR 137
+K VVR
Sbjct: 362 EKEVVR 367
>gi|27882003|gb|AAH43847.1| Pou50 protein, partial [Xenopus laevis]
Length = 377
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 214 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 270
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 271 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 327
Query: 132 KKNVVR 137
+K VVR
Sbjct: 328 EKEVVR 333
>gi|426336705|ref|XP_004031602.1| PREDICTED: uncharacterized protein LOC101153675 [Gorilla gorilla
gorilla]
Length = 550
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 382 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 438
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 439 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 494
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 495 LEKEVVR 501
>gi|157168331|ref|NP_001096655.1| POU domain, class 3, transcription factor 1-B [Xenopus laevis]
gi|82177950|sp|Q561L5.1|P3F1B_XENLA RecName: Full=POU domain, class 3, transcription factor 1-B;
AltName: Full=Homeotic protein NRL-34; Short=XlNRL-34;
AltName: Full=Homeotic protein NRL-34-A
gi|62533219|gb|AAH93556.1| Nrl34-A protein [Xenopus laevis]
Length = 375
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 212 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 269 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 325
Query: 132 KKNVVR 137
+K VVR
Sbjct: 326 EKEVVR 331
>gi|57112535|ref|XP_549108.1| PREDICTED: POU domain, class 3, transcription factor 4 [Canis lupus
familiaris]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|348532069|ref|XP_003453529.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Oreochromis niloticus]
Length = 381
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 221 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 277
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P+ +I +A+ L
Sbjct: 278 STSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEIITLADSLH 333
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 334 LEKEVVR 340
>gi|297710446|ref|XP_002831894.1| PREDICTED: POU domain, class 3, transcription factor 4 [Pongo
abelii]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|148235592|ref|NP_001090728.1| POU domain, class 3, transcription factor 4 [Xenopus (Silurana)
tropicalis]
gi|281312444|sp|A1L0Z1.1|PO3F4_XENTR RecName: Full=POU domain, class 3, transcription factor 4
gi|119850891|gb|AAI27329.1| pou3f4 protein [Xenopus (Silurana) tropicalis]
Length = 360
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 203 RRIKLGFTQADVGLALGTLY---GNVFSQATICRFEALQLSFKNMCKLKPLLNKWLEEAD 259
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L
Sbjct: 260 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQ 315
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 316 LEKEVVR 322
>gi|403291602|ref|XP_003936872.1| PREDICTED: POU domain, class 3, transcription factor 4 [Saimiri
boliviensis boliviensis]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|219686273|dbj|BAH08689.1| POU domain class 5 transcription factor 1 [Pagrus major]
Length = 436
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ WL EAE + N
Sbjct: 277 GFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAET-SDN 332
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ V K+++RTS+ + +LE+YF P+P+ ++I I++ L L+++VV
Sbjct: 333 PQDMYKIERVFVDTRKRKRRTSLEGAVRSALESYFIKCPKPNTQEITHISDDLGLERDVV 392
Query: 137 R 137
R
Sbjct: 393 R 393
>gi|170595354|ref|XP_001902346.1| Homeobox protein ceh-6 [Brugia malayi]
gi|158590024|gb|EDP28805.1| Homeobox protein ceh-6, putative [Brugia malayi]
Length = 414
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 262 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSS 318
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K LE +F P+P+ ++IA +A +L L+K VV
Sbjct: 319 PNSAFEKMTGQ-GGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEIAQVAMELQLEKEVV 377
Query: 137 R 137
R
Sbjct: 378 R 378
>gi|260808508|ref|XP_002599049.1| hypothetical protein BRAFLDRAFT_224999 [Branchiostoma floridae]
gi|229284325|gb|EEN55061.1| hypothetical protein BRAFLDRAFT_224999 [Branchiostoma floridae]
Length = 188
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 10/131 (7%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG ALA++ G SQ+TICRFE+L LS+ N LKPILQ W+
Sbjct: 36 DFKLRRIKLGYTQTNVGSALASVH--GTD-FSQTTICRFENLQLSYKNACKLKPILQKWI 92
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
EEAE P LP E+KRK RT+I K +LE +F Q +PS + I +A
Sbjct: 93 EEAENSG-----GPGGDK-LPGNERKRKRRTTIGLSAKEALERHFLKQNKPSSQDIVRVA 146
Query: 127 EKLDLKKNVVR 137
E L L K VVR
Sbjct: 147 ESLRLDKEVVR 157
>gi|444518988|gb|ELV12489.1| POU domain, class 3, transcription factor 4 [Tupaia chinensis]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|380503872|ref|NP_001244113.1| POU domain, class 3, transcription factor 4 [Equus caballus]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|291407944|ref|XP_002720190.1| PREDICTED: POU class 3 homeobox 3 [Oryctolagus cuniculus]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|50400987|sp|Q812B1.1|PO3F4_MESAU RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4
gi|28194177|gb|AAO33434.1|AF469664_1 POU homeodomain protein [Mesocricetus auratus]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|62858111|ref|NP_001016504.1| POU domain, class 3, transcription factor 1 [Xenopus (Silurana)
tropicalis]
gi|82249324|sp|Q4QQQ7.1|PO3F1_XENTR RecName: Full=POU domain, class 3, transcription factor 1
gi|67867506|gb|AAH98088.1| POU class 3 homeobox 1 [Xenopus (Silurana) tropicalis]
gi|89272042|emb|CAJ82966.1| pou domain class 3 transcription factor 1 [Xenopus (Silurana)
tropicalis]
Length = 375
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 212 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 269 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 325
Query: 132 KKNVVR 137
+K VVR
Sbjct: 326 EKEVVR 331
>gi|354486940|ref|XP_003505633.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Cricetulus griseus]
gi|344237464|gb|EGV93567.1| POU domain, class 3, transcription factor 4 [Cricetulus griseus]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|433288480|ref|NP_000298.3| POU domain, class 3, transcription factor 4 [Homo sapiens]
gi|332861110|ref|XP_003317585.1| PREDICTED: POU domain, class 3, transcription factor 4 [Pan
troglodytes]
gi|397508027|ref|XP_003824476.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Pan
paniscus]
gi|426396551|ref|XP_004064501.1| PREDICTED: POU domain, class 3, transcription factor 4 [Gorilla
gorilla gorilla]
gi|732756|emb|CAA57767.1| Brain 4 [Homo sapiens]
gi|119618983|gb|EAW98577.1| POU domain, class 3, transcription factor 4 [Homo sapiens]
gi|189054618|dbj|BAG37468.1| unnamed protein product [Homo sapiens]
gi|208968683|dbj|BAG74180.1| POU class 3 homeobox 4 [synthetic construct]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|281185476|sp|P31363.2|P3F1A_XENLA RecName: Full=POU domain, class 3, transcription factor 1-A;
AltName: Full=Homeotic protein NRL-22; Short=XlNRL-22;
AltName: Full=Transcription factor POU1; Short=XlPOU 1;
Short=XlPOU1
Length = 375
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 212 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 269 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 325
Query: 132 KKNVVR 137
+K VVR
Sbjct: 326 EKEVVR 331
>gi|328705527|ref|XP_003242837.1| PREDICTED: POU domain protein CF1A-like [Acyrthosiphon pisum]
Length = 439
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 234 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 290
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 291 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 347
Query: 132 KKNVVR 137
+K VVR
Sbjct: 348 EKEVVR 353
>gi|302565798|ref|NP_001181188.1| POU domain, class 3, transcription factor 4 [Macaca mulatta]
gi|355704957|gb|EHH30882.1| Octamer-binding transcription factor 9 [Macaca mulatta]
gi|355757508|gb|EHH61033.1| Octamer-binding transcription factor 9 [Macaca fascicularis]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|410906475|ref|XP_003966717.1| PREDICTED: POU domain, class 3, transcription factor 3-B-like
isoform 2 [Takifugu rubripes]
Length = 438
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 256 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 312
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I+++A+ L L
Sbjct: 313 SSTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEISSLADNLQL 369
Query: 132 KKNVVR 137
+K VVR
Sbjct: 370 EKEVVR 375
>gi|354502206|ref|XP_003513178.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Cricetulus griseus]
Length = 429
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 194 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 250
Query: 72 AQAKNKRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP +APS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 251 SSPS----DPSANAPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 306
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 307 IAEQLSMEKEVVR 319
>gi|400834|sp|P31370.1|POU1_DUGJA RecName: Full=POU domain protein 1; Short=DjPOU1
gi|217312|dbj|BAA02308.1| DjPOU1 [Dugesia japonica]
Length = 559
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM L+P+LQ WL EA+
Sbjct: 277 RRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLRPLLQKWLHEAD 333
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ +++ + + K++KRTSI A K LE+ F +PS + I+++AEKL L
Sbjct: 334 SSSESP---TNFDKISAQSRKRKKRTSIEANVKSILESSFMKLSKPSAQDISSLAEKLSL 390
Query: 132 KKNVVR 137
+K VVR
Sbjct: 391 EKEVVR 396
>gi|77416874|sp|P49335.2|PO3F4_HUMAN RecName: Full=POU domain, class 3, transcription factor 4; AltName:
Full=Brain-specific homeobox/POU domain protein 4;
Short=Brain-4; Short=Brn-4; AltName:
Full=Octamer-binding protein 9; Short=Oct-9; AltName:
Full=Octamer-binding transcription factor 9; Short=OTF-9
gi|146327186|gb|AAI41562.1| POU class 3 homeobox 4 [synthetic construct]
gi|148921734|gb|AAI46552.1| POU class 3 homeobox 4 [synthetic construct]
Length = 361
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEGLQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>gi|47028623|gb|AAT09163.1| POU domain transcription factor oct-4 [Ambystoma mexicanum]
Length = 398
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM L+P+LQ WL EA+ +N
Sbjct: 204 GFTQADVGLALGALYGK---MFSQTTICRFEALQLSFKNMCKLRPLLQRWLVEADTN-EN 259
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + + L +KRKRTSI K +LEA+F P+P+ ++IA I+E L+L+K+VV
Sbjct: 260 LQELCNLENALQQA-RKRKRTSIENSVKDNLEAFFLKCPKPTHQEIAHISEDLNLEKDVV 318
Query: 137 R 137
R
Sbjct: 319 R 319
>gi|319655705|ref|NP_571364.1| brain POU domain gene 1.2 [Danio rerio]
gi|125858057|gb|AAI29153.1| Brain POU domain gene 1.2 [Danio rerio]
Length = 337
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 177 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 233
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P +I ++A+ L
Sbjct: 234 STSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPGASEINSLADSLQ 289
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 290 LEKEVVR 296
>gi|432910407|ref|XP_004078350.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Oryzias latipes]
Length = 375
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 217 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 270
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I+ +A L L+K VV
Sbjct: 271 TGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEISTLAGTLQLEKEVV 330
Query: 137 R 137
R
Sbjct: 331 R 331
>gi|397489036|ref|XP_003815543.1| PREDICTED: uncharacterized protein LOC100972472 [Pan paniscus]
Length = 614
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 416 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 472
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 473 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 529
Query: 132 KKNVVR 137
+K VVR
Sbjct: 530 EKEVVR 535
>gi|45768559|gb|AAH67685.1| Brn1.2 protein, partial [Danio rerio]
Length = 334
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 174 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 230
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P +I ++A+ L
Sbjct: 231 STSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPGASEINSLADSLQ 286
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 287 LEKEVVR 293
>gi|85822768|gb|ABC84854.1| POU5f1/POU2 [Gadus morhua]
Length = 227
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 74/122 (60%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL NL G + SQ+TICRFE+L LS NM LKP+LQ WL EAE +
Sbjct: 24 GFTQADVGLALGNL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAET-SD 78
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + V K+++RTS+ + +LE+YF P+P+ I I++ L L+++V
Sbjct: 79 NPQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFIKCPKPNTIDITHISDDLGLERDV 138
Query: 136 VR 137
VR
Sbjct: 139 VR 140
>gi|308220118|gb|ADO22631.1| POU class homeobox transcription factor Pou1 [Mnemiopsis leidyi]
Length = 339
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 9/121 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG ALA++ G SQ+TICRFE+L LS N L PIL+ WLEE E K+
Sbjct: 175 GYTQTNVGGALASVH--GTD-FSQTTICRFENLQLSFKNACKLMPILRKWLEETEKSGKH 231
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + P+ K+++RT+I K +LE +F Q +PS ++I AIA+ L L+K VV
Sbjct: 232 GQE------ISPSERKRKRRTTIGVSAKDNLEQHFERQSKPSSQEIQAIAKSLGLEKEVV 285
Query: 137 R 137
R
Sbjct: 286 R 286
>gi|156230918|gb|AAI52215.1| Unknown (protein for IMAGE:8122494) [Danio rerio]
gi|170285095|gb|AAI60970.1| LOC100145403 protein [Xenopus (Silurana) tropicalis]
Length = 337
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 210 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I +A L L+K VV
Sbjct: 264 TGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVV 323
Query: 137 R 137
R
Sbjct: 324 R 324
>gi|348526119|ref|XP_003450568.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Oreochromis niloticus]
Length = 374
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 216 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 269
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I+ +A L L K VV
Sbjct: 270 TGSPTNLDKIAAQGRKRKKRTSIEVAVKGALENHFLKCPKPSAHEISTLAGTLQLDKEVV 329
Query: 137 R 137
R
Sbjct: 330 R 330
>gi|18859253|ref|NP_571236.1| POU domain, class 3, transcription factor 1 [Danio rerio]
gi|2495312|sp|Q90482.1|PO3F1_DANRE RecName: Full=POU domain, class 3, transcription factor 1; AltName:
Full=POU domain protein 50; Short=ZP-50
gi|1418692|emb|CAA65282.1| POU domain protein [Danio rerio]
gi|37194658|gb|AAH58306.1| POU domain gene 50 [Danio rerio]
Length = 368
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 210 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I +A L L+K VV
Sbjct: 264 TGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVV 323
Query: 137 R 137
R
Sbjct: 324 R 324
>gi|42542928|gb|AAH66419.1| POU domain gene 50 [Danio rerio]
Length = 368
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 210 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I +A L L+K VV
Sbjct: 264 TGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVV 323
Query: 137 R 137
R
Sbjct: 324 R 324
>gi|326933007|ref|XP_003212601.1| PREDICTED: POU domain, class 3, transcription factor 1-like
[Meleagris gallopavo]
Length = 248
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ +
Sbjct: 45 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSSTGS 101
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I ++A+ L L+K VV
Sbjct: 102 P---TNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQLEKEVV 158
Query: 137 R 137
R
Sbjct: 159 R 159
>gi|357435373|gb|AET79963.1| POU domain protein 2, partial [Carassius auratus]
Length = 182
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL NL G + SQ+TICRFE+L LS NM LKP+LQ WL EAE ++
Sbjct: 31 GFTQADVGLALGNL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSE 85
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + V K+++RTS+ + +LE+YF P+P+ +I I++ L L+++V
Sbjct: 86 NPQDMYKIERVFVDTRKRKRRTSLEGTVRCALESYFMKCPKPNTLEITHISDDLGLERDV 145
Query: 136 VR 137
VR
Sbjct: 146 VR 147
>gi|344284041|ref|XP_003413779.1| PREDICTED: hypothetical protein LOC100669674 [Loxodonta africana]
Length = 528
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 360 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 416
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L
Sbjct: 417 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQ 472
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 473 LEKEVVR 479
>gi|739455|prf||2003279A brn-2 protein
Length = 445
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 282 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 338
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+ S ++I ++A+ L
Sbjct: 339 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKTSAQEITSLADSLQ 394
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 395 LEKEVVR 401
>gi|2495310|sp|P79745.1|P3F3B_DANRE RecName: Full=POU domain, class 3, transcription factor 3-B;
AltName: Full=Brain-specific homeobox/POU domain protein
1.0; Short=Brain-1.0; Short=zfBrn-1.0; AltName: Full=POU
domain protein 1; Short=ZFPOU1; AltName: Full=POU domain
protein 23; Short=ZP-23
gi|1730453|emb|CAA69215.1| POU domain protein [Danio rerio]
Length = 443
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 256 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 312
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 313 SSTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQL 369
Query: 132 KKNVVR 137
+K VVR
Sbjct: 370 EKEVVR 375
>gi|45504384|ref|NP_958855.1| POU domain, class 3, transcription factor 3-B isoform 2 [Danio
rerio]
gi|34193952|gb|AAH56549.1| POU domain gene 23 [Danio rerio]
Length = 444
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 257 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 313
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 314 SSTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQL 370
Query: 132 KKNVVR 137
+K VVR
Sbjct: 371 EKEVVR 376
>gi|4337121|gb|AAB92590.2| alternatively spliced brn-1.1 protein variant [Danio rerio]
Length = 441
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 255 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 311
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 312 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQL 368
Query: 132 KKNVVR 137
+K VVR
Sbjct: 369 EKEVVR 374
>gi|42406356|gb|AAH65961.1| POU domain gene 12 [Danio rerio]
Length = 446
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 260 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 316
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 317 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQL 373
Query: 132 KKNVVR 137
+K VVR
Sbjct: 374 EKEVVR 379
>gi|1323758|gb|AAB00433.1| Brn-1.1 POU domain, partial [Danio rerio]
Length = 113
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 74/119 (62%), Gaps = 8/119 (6%)
Query: 19 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 78
TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 2 TQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS-- 56
Query: 79 RDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K VV
Sbjct: 57 --PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEVV 113
>gi|157787179|ref|NP_001099215.1| POU domain, class 2, transcription factor 3 [Rattus norvegicus]
gi|149041420|gb|EDL95261.1| POU domain, class 2, transcription factor 3, isoform CRA_a [Rattus
norvegicus]
Length = 430
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 194 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 250
Query: 72 AQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP A PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 251 SSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 306
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 307 IAEQLSMEKEVVR 319
>gi|348570460|ref|XP_003471015.1| PREDICTED: POU domain, class 3, transcription factor 4-like [Cavia
porcellus]
Length = 360
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 203 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 259
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L
Sbjct: 260 LSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQ 315
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 316 LEKEVVR 322
>gi|348506702|ref|XP_003440897.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Oreochromis niloticus]
Length = 392
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 232 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 288
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P +I ++A+ L
Sbjct: 289 STSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPGAAEINSLADSLQ 344
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 345 LEKEVVR 351
>gi|299474127|gb|ADJ18297.1| transcription factor [Takifugu rubripes]
Length = 393
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 233 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 289
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P +I ++A+ L
Sbjct: 290 STSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPGAAEINSLADSLQ 345
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 346 LEKEVVR 352
>gi|410916423|ref|XP_003971686.1| PREDICTED: POU domain, class 3, transcription factor 2-like
[Takifugu rubripes]
Length = 583
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 213 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 269
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P +I ++A+ L
Sbjct: 270 STSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPGAAEINSLADSLQ 325
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 326 LEKEVVR 332
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 423 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 479
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P +I ++A+ L
Sbjct: 480 STSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPGAAEINSLADSLQ 535
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 536 LEKEVVR 542
>gi|122692377|ref|NP_001073817.1| POU domain, class 3, transcription factor 2 [Bos taurus]
gi|86438578|gb|AAI12697.1| POU class 3 homeobox 2 [Bos taurus]
Length = 438
Score = 94.0 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 275 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 331
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 332 SSSGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 388
Query: 132 KKNVVR 137
+K VVR
Sbjct: 389 EKEVVR 394
>gi|359319398|ref|XP_853080.3| PREDICTED: POU domain, class 2, transcription factor 3 [Canis lupus
familiaris]
Length = 396
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 206 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLHDAETSPS- 261
Query: 77 KRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP + PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 262 ---DPSMNTPSSFPTLNEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 318
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 319 SMEKEVVR 326
>gi|20373129|ref|NP_571225.1| POU domain, class 3, transcription factor 3-A [Danio rerio]
gi|2789662|gb|AAC41300.1| type III POU domain protein [Danio rerio]
Length = 445
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 259 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 315
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 316 STTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQL 372
Query: 132 KKNVVR 137
+K VVR
Sbjct: 373 EKEVVR 378
>gi|345308418|ref|XP_003428692.1| PREDICTED: POU domain, class 3, transcription factor 4-like
[Ornithorhynchus anatinus]
Length = 314
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 155 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 211
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 212 SSTGGPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 268
Query: 132 KKNVVR 137
+K VVR
Sbjct: 269 EKEVVR 274
>gi|313231435|emb|CBY08549.1| unnamed protein product [Oikopleura dioica]
Length = 337
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAK 75
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WL+EA+ A
Sbjct: 213 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLSRWLDEADSATGG 269
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + G K++KRTSI K +LE F QP+PS +I AE L L+K V
Sbjct: 270 MPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAEITNTAESLQLEKEV 329
Query: 136 VR 137
VR
Sbjct: 330 VR 331
>gi|18859249|ref|NP_571187.1| POU domain, class 5, transcription factor 1 [Danio rerio]
gi|871003|emb|CAA59006.1| pou-2 [Danio rerio]
Length = 472
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL NL G + SQ+TICRFE+L LS NM LKP+LQ WL EAE ++
Sbjct: 272 GFTQADVGLALGNL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSE 326
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + V K+++RTS+ + +LE+YF P+P+ +I I++ L L+++V
Sbjct: 327 NPQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFVKCPKPNTLEITHISDDLGLERDV 386
Query: 136 VR 137
VR
Sbjct: 387 VR 388
>gi|324517750|gb|ADY46910.1| Homeobox protein ceh-6 [Ascaris suum]
Length = 300
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 148 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSS 204
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K LE +F P+P+ ++IA +A +L L+K VV
Sbjct: 205 PNSAFEKMTGQ-GGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEIAQVAVELQLEKEVV 263
Query: 137 R 137
R
Sbjct: 264 R 264
>gi|144583210|gb|ABP01321.1| POU domain class 1 transcription factor 1 [Branchiostoma floridae]
Length = 356
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/131 (45%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG ALA++ G SQ+TICRFE+L LS+ N LKPILQ W+
Sbjct: 204 DFKLRRIKLGYTQTNVGSALASVH--GTD-FSQTTICRFENLQLSYKNACKLKPILQKWI 260
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
EEAE LP E+KRK RT+I K +LE +F Q +PS + I +A
Sbjct: 261 EEAENSGG------PGGDKLPGNERKRKRRTTIGLSAKEALERHFLKQNKPSSQDIVRVA 314
Query: 127 EKLDLKKNVVR 137
E L L K VVR
Sbjct: 315 ESLRLDKEVVR 325
>gi|149041421|gb|EDL95262.1| POU domain, class 2, transcription factor 3, isoform CRA_b [Rattus
norvegicus]
Length = 348
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 117 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 172
Query: 77 KRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP A PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 173 ---DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 229
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 230 SMEKEVVR 237
>gi|119226249|ref|NP_035269.2| POU domain, class 2, transcription factor 3 [Mus musculus]
gi|148693602|gb|EDL25549.1| mCG1529 [Mus musculus]
gi|151556704|gb|AAI48605.1| POU domain, class 2, transcription factor 3 [synthetic construct]
Length = 431
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 194 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 250
Query: 72 AQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP A PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 251 SSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 306
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 307 IAEQLSMEKEVVR 319
>gi|85680226|gb|ABC72303.1| OctB [Oikopleura dioica]
Length = 219
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAK 75
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WL+EA+ A
Sbjct: 65 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLSRWLDEADSATGG 121
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + G K++KRTSI K +LE F QP+PS +I AE L L+K V
Sbjct: 122 MPTIGGDKLNQQVQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAEITNTAESLQLEKEV 181
Query: 136 VR 137
VR
Sbjct: 182 VR 183
>gi|332218126|ref|XP_003258210.1| PREDICTED: POU domain, class 3, transcription factor 2, partial
[Nomascus leucogenys]
Length = 156
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 75/119 (63%), Gaps = 8/119 (6%)
Query: 20 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 79
QADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 1 QADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGS--- 54
Query: 80 DPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K VVR
Sbjct: 55 -PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVR 112
>gi|2495309|sp|Q90270.1|PO5F1_DANRE RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=POU domain protein 2
gi|461303|dbj|BAA05901.1| Pou2 [Danio rerio]
Length = 472
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ WL EAE ++N
Sbjct: 272 GFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSEN 327
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ V K+++RTS+ + +LE+YF P+P+ +I I++ L L+++VV
Sbjct: 328 PQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFVKCPKPNTLEITHISDDLGLERDVV 387
Query: 137 R 137
R
Sbjct: 388 R 388
>gi|321173100|gb|ADW77331.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGHTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + SLE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|289469934|gb|ADC96616.1| POU domain class 5 transcription factor 1 [Labeo rohita]
Length = 472
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ WL EAE ++N
Sbjct: 272 GFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSEN 327
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ V K+++RTS+ + +LE+YF P+P+ +I I++ L L+++VV
Sbjct: 328 PQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFVKCPKPNTLEITHISDDLGLERDVV 387
Query: 137 R 137
R
Sbjct: 388 R 388
>gi|47224217|emb|CAG09063.1| unnamed protein product [Tetraodon nigroviridis]
Length = 400
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 240 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 296
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P +I ++A+ L
Sbjct: 297 STSGS----PTSLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPGAAEINSLADSLQ 352
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 353 LEKEVVR 359
>gi|53515|emb|CAA79222.1| octamer binding protein-11 [Mus musculus]
Length = 403
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 199 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 254
Query: 77 KRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP A PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 255 ---DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 311
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 312 SMEKEVVR 319
>gi|301756548|ref|XP_002914119.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Ailuropoda melanoleuca]
Length = 435
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLHDAE 257
Query: 72 AQAKNKRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
DP + PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 TSPS----DPSMNTPSSFPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|1173442|sp|P42571.1|PO2F3_RAT RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Octamer-binding protein 11; Short=Oct-11; AltName:
Full=Octamer-binding transcription factor 11;
Short=OTF-11; AltName: Full=Transcription factor Skn-1
Length = 430
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 199 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPA- 254
Query: 77 KRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP A PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 255 ---DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 311
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 312 SMEKEVVR 319
>gi|351705894|gb|EHB08813.1| POU domain, class 2, transcription factor 3 [Heterocephalus glaber]
Length = 426
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 196 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 251
Query: 77 KRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP APS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 252 ---DPSVSAPSSYPTLNEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 308
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 309 SMEKEVVR 316
>gi|74148920|dbj|BAE32148.1| unnamed protein product [Mus musculus]
Length = 419
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 182 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 238
Query: 72 AQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP A PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 239 SSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 294
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 295 IAEQLSMEKEVVR 307
>gi|426370777|ref|XP_004052336.1| PREDICTED: POU domain, class 2, transcription factor 3 [Gorilla
gorilla gorilla]
Length = 436
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSTYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|256080327|ref|XP_002576433.1| pou3/brn-1 [Schistosoma mansoni]
gi|350645455|emb|CCD59807.1| POU Transcription factor,putative [Schistosoma mansoni]
Length = 764
Score = 93.6 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WL EA+
Sbjct: 626 RRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLYEAD 682
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + G K++KRTSI K LE +F QP+P + I +A+ L L
Sbjct: 683 CSTGTTN---NLDKITTQGRKRKKRTSIEIGVKGILENHFIKQPKPLAQDIIQLADVLGL 739
Query: 132 KKNVVR 137
+K VVR
Sbjct: 740 EKEVVR 745
>gi|71896129|ref|NP_001026755.1| POU domain, class 3, transcription factor 1 [Gallus gallus]
gi|3172417|gb|AAC18592.1| POU class III transcription factor [Gallus gallus]
Length = 372
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 209 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 265
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 266 SSTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 322
Query: 132 KKNVVR 137
+K VVR
Sbjct: 323 EKEVVR 328
>gi|395848433|ref|XP_003796855.1| PREDICTED: POU domain, class 2, transcription factor 3 [Otolemur
garnettii]
Length = 436
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 206 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 261
Query: 77 KRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 262 ---DPSGSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 318
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 319 SMEKEVVR 326
>gi|410914814|ref|XP_003970882.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 2, transcription
factor 3-like [Takifugu rubripes]
Length = 385
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 169 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSD 225
Query: 77 KRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+P P + G K++KRTSI K +LE F P+P+ E+I I+E+L ++K
Sbjct: 226 SMSNPTTMPPLIEGYGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEITLISEQLSMEKE 285
Query: 135 VVR 137
VVR
Sbjct: 286 VVR 288
>gi|147900063|ref|NP_001086347.1| POU domain, class 3, transcription factor 4-B [Xenopus laevis]
gi|82183641|sp|Q6DJN3.1|P3F4B_XENLA RecName: Full=POU domain, class 3, transcription factor 4-B
gi|49522099|gb|AAH75142.1| MGC81954 protein [Xenopus laevis]
Length = 356
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 204 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 260
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ +I+++A+ L L+K V
Sbjct: 261 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAALEISSLADSLQLEKEV 316
Query: 136 VR 137
VR
Sbjct: 317 VR 318
>gi|281347824|gb|EFB23408.1| hypothetical protein PANDA_001963 [Ailuropoda melanoleuca]
Length = 390
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 173 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLHDAETSPS- 228
Query: 77 KRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP + PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 229 ---DPSMNTPSSFPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 285
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 286 SMEKEVVR 293
>gi|312101612|ref|XP_003149690.1| hypothetical protein LOAG_14143 [Loa loa]
gi|307755145|gb|EFO14379.1| hypothetical protein LOAG_14143 [Loa loa]
Length = 425
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 273 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLYKWLEEADSTSSS 329
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K LE +F P+P+ ++I +A +L L+K VV
Sbjct: 330 PNSAFEKMTGQ-GGRKRKKRTSIEVQVKSRLEYHFQKNPKPNAQEITQVAMELQLEKEVV 388
Query: 137 R 137
R
Sbjct: 389 R 389
>gi|3355734|emb|CAA49383.1| transcription factor [Girardia tigrina]
Length = 507
Score = 93.2 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM L+P+LQ WL EA+
Sbjct: 278 RRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLRPLLQKWLHEAD 334
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ +++ + + K++KRTSI A K LE+ F +PS + I+++AEKL L
Sbjct: 335 SSSESP---TNFDKISAQSRKRKKRTSIEANVKSILESSFMKLSKPSAQDISSLAEKLSL 391
Query: 132 KKNVVR 137
+K VVR
Sbjct: 392 EKEVVR 397
>gi|268054239|gb|ACY92606.1| nubbin-like transcription factor [Saccoglossus kowalevskii]
Length = 453
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 74/127 (58%), Gaps = 14/127 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 178 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSMTN 234
Query: 77 ------KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
PD G +++KRTSI + +LE F P+P+ E+IA +A++L
Sbjct: 235 PAVLGSPHTSPDG-----MGRRRKKRTSIETNVRAALEKSFMTNPKPTSEEIAMLADQLQ 289
Query: 131 LKKNVVR 137
++K VVR
Sbjct: 290 MEKEVVR 296
>gi|84374238|gb|ABC58219.1| transcription factor OctB, partial [Oikopleura dioica]
Length = 255
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAK 75
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WL+EA+ A
Sbjct: 101 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLSRWLDEADSATGG 157
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + G K++KRTSI K +LE F QP+PS +I AE L L+K V
Sbjct: 158 MPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAEITNTAESLQLEKEV 217
Query: 136 VR 137
VR
Sbjct: 218 VR 219
>gi|477686|pir||B46216 transcription factor Skn-1, splice form i - rat
Length = 348
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 117 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPA- 172
Query: 77 KRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP A PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 173 ---DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 229
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 230 SMEKEVVR 237
>gi|148664218|ref|NP_055167.2| POU domain, class 2, transcription factor 3 isoform 1 [Homo
sapiens]
gi|311033416|sp|Q9UKI9.3|PO2F3_HUMAN RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Octamer-binding protein 11; Short=Oct-11; AltName:
Full=Octamer-binding transcription factor 11;
Short=OTF-11; AltName: Full=Transcription factor PLA-1;
AltName: Full=Transcription factor Skn-1
gi|75517190|gb|AAI01650.1| POU class 2 homeobox 3 [Homo sapiens]
gi|167773585|gb|ABZ92227.1| POU class 2 homeobox 3 [synthetic construct]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|410972093|ref|XP_003992495.1| PREDICTED: POU domain, class 2, transcription factor 3 [Felis
catus]
Length = 423
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 74/128 (57%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 194 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLHDAETSPS- 249
Query: 77 KRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 250 ---DPSGSTPSSFPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 306
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 307 SMEKEVVR 314
>gi|6002919|gb|AAF00199.1|AF162278_1 Skn-1a/Epoc-1/Oct-11 POU transcription factor [Homo sapiens]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|348576527|ref|XP_003474038.1| PREDICTED: POU domain, class 5, transcription factor 1-like [Cavia
porcellus]
Length = 361
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L + G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGAI----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQRWVEEADNNNE 216
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + S+L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 217 NLQEKCKTESLLQA--RKRKRTSIEDQVRGNLENMFLQCPKPTLQQISRIAQQLGLEKDV 274
Query: 136 VR 137
VR
Sbjct: 275 VR 276
>gi|119587907|gb|EAW67503.1| POU domain, class 2, transcription factor 3 [Homo sapiens]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|293612330|gb|ADE48586.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFESL LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFESLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|5882207|gb|AAD55245.1|AF133895_1 POU domain transcription factor OCT11a [Homo sapiens]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|158257418|dbj|BAF84682.1| unnamed protein product [Homo sapiens]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|296216413|ref|XP_002754486.1| PREDICTED: POU domain, class 2, transcription factor 3 isoform 2
[Callithrix jacchus]
Length = 442
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 212 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 267
Query: 77 KRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP PS P+ G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 268 ---DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 324
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 325 SMEKEVVR 332
>gi|226372800|gb|ACO52025.1| POU domain, class 5, transcription factor 1 [Rana catesbeiana]
Length = 420
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS+ NM LKP+L WL
Sbjct: 217 DLKQKRVSLGFTQADVGYALGVLY---EKMFSQTTICRFESLQLSYKNMCQLKPLLTRWL 273
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
EAE + +N + + VL K+++RT+I K +LE YF P+P +++ IA
Sbjct: 274 REAE-RNENLQELVNQEQVLIQSRKRKRRTNIENIAKDNLEIYFMKNPKPGPQEMEQIAR 332
Query: 128 KLDLKKNVVR 137
L + K+VVR
Sbjct: 333 HLHMAKDVVR 342
>gi|403262551|ref|XP_003923641.1| PREDICTED: POU domain, class 2, transcription factor 3 [Saimiri
boliviensis boliviensis]
Length = 442
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 212 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 267
Query: 77 KRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP PS P+ G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 268 ---DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 324
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 325 SMEKEVVR 332
>gi|297269406|ref|XP_001100709.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Macaca
mulatta]
gi|402895555|ref|XP_003910890.1| PREDICTED: POU domain, class 2, transcription factor 3 [Papio
anubis]
gi|355567142|gb|EHH23521.1| hypothetical protein EGK_06998 [Macaca mulatta]
gi|355752718|gb|EHH56838.1| hypothetical protein EGM_06322 [Macaca fascicularis]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|313215124|emb|CBY42831.1| unnamed protein product [Oikopleura dioica]
Length = 426
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAK 75
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WL+EA+ A
Sbjct: 258 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLSRWLDEADSATGG 314
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + G K++KRTSI K +LE F QP+PS +I AE L L+K V
Sbjct: 315 MPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAEITNTAESLQLEKEV 374
Query: 136 VR 137
VR
Sbjct: 375 VR 376
>gi|5123781|emb|CAB45383.1| PLA-1 protein [Homo sapiens]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|397498528|ref|XP_003820033.1| PREDICTED: POU domain, class 2, transcription factor 3 [Pan
paniscus]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|332208478|ref|XP_003253332.1| PREDICTED: POU domain, class 2, transcription factor 3 [Nomascus
leucogenys]
Length = 436
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>gi|23893421|emb|CAD12362.1| nubbin [Cupiennius salei]
Length = 290
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+A N
Sbjct: 89 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQRWLEDADASLSN 145
Query: 77 KRRDPDAPSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ P G +++KRTSI + +LE F P+P+ E+IA +AE L ++K
Sbjct: 146 PHSSLASAHTTPESIGRRRKKRTSIETTVRLALEKAFLQNPKPTSEEIAMLAESLAMEKE 205
Query: 135 VVR 137
VVR
Sbjct: 206 VVR 208
>gi|347658964|ref|NP_001231611.1| POU domain, class 2, transcription factor 3 isoform 2 [Homo
sapiens]
Length = 438
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 203 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 259
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 260 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 315
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 316 IAEQLSMEKEVVR 328
>gi|329663363|ref|NP_001192759.1| POU domain, class 2, transcription factor 3 [Bos taurus]
gi|296480158|tpg|DAA22273.1| TPA: PLA-1 protein-like [Bos taurus]
Length = 440
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 205 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 261
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP P+ PA G K++KRTSI + +LE F P+PS E+I+
Sbjct: 262 SSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 317
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 318 IAEQLSMEKEVVR 330
>gi|194378808|dbj|BAG63569.1| unnamed protein product [Homo sapiens]
Length = 438
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 203 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 259
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 260 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 315
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 316 IAEQLSMEKEVVR 328
>gi|358340381|dbj|GAA34293.2| POU domain transcription factor class 3 [Clonorchis sinensis]
Length = 1247
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/126 (44%), Positives = 71/126 (56%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WL+EA+
Sbjct: 769 RRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLQEAD 825
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + G K++KRTSI K LE +FA QP+P + I +A L L
Sbjct: 826 CSTGTAS---NLDKIAAQGRKRKKRTSIEVSVKGVLETHFARQPKPLAQDIVQLANSLGL 882
Query: 132 KKNVVR 137
+K VVR
Sbjct: 883 EKEVVR 888
>gi|402216190|gb|AFQ35836.1| POU class 2 homeobox 3 transcript variant 1 [Ovis aries]
Length = 429
Score = 92.4 bits (228), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 194 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 250
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP P+ PA G K++KRTSI + +LE F P+PS E+I+
Sbjct: 251 SSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 306
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 307 IAEQLSMEKEVVR 319
>gi|14279710|gb|AAK58701.1| Pdm protein [Steatoda triangulosa]
Length = 137
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+A N
Sbjct: 10 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQRWLEDADASMNN 66
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+A + + G +++KRTSI + +LE F P+P+ E+I+ +AE L ++K V
Sbjct: 67 PAALTNAHTTPESIGRRRKKRTSIETTVRLALEKAFLQDPKPTSEQISILAETLTMEKEV 126
Query: 136 VR 137
VR
Sbjct: 127 VR 128
>gi|313245330|emb|CBY40092.1| unnamed protein product [Oikopleura dioica]
Length = 485
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAK 75
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WL+EA+ A
Sbjct: 317 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLSRWLDEADSATGG 373
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + G K++KRTSI K +LE F QP+PS +I AE L L+K V
Sbjct: 374 MPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAEITNTAESLQLEKEV 433
Query: 136 VR 137
VR
Sbjct: 434 VR 435
>gi|348574063|ref|XP_003472810.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Cavia
porcellus]
Length = 430
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 195 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 251
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 252 SSPS----DPSVSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 307
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 308 IAEQLSMEKEVVR 320
>gi|291383799|ref|XP_002708409.1| PREDICTED: POU transcription factor [Oryctolagus cuniculus]
Length = 449
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 219 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 274
Query: 77 KRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 275 ---DPSVSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 331
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 332 SMEKEVVR 339
>gi|440904909|gb|ELR55361.1| POU domain, class 2, transcription factor 3, partial [Bos grunniens
mutus]
Length = 433
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 198 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 254
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP P+ PA G K++KRTSI + +LE F P+PS E+I+
Sbjct: 255 SSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 310
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 311 IAEQLSMEKEVVR 323
>gi|335295018|ref|XP_003130003.2| PREDICTED: POU domain, class 2, transcription factor 3 [Sus scrofa]
Length = 305
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 70 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 126
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 127 SSPS----DPSVSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 182
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 183 IAEQLSMEKEVVR 195
>gi|19310204|gb|AAL86635.1|AF297550_1 class III POU protein [Sacculina carcini]
Length = 112
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 6/117 (5%)
Query: 21 ADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRD 80
ADVG AL L SQ+TICRFE+L LS NM LKP+LQ WL+EA++
Sbjct: 1 ADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLDEADSTTGTA--- 54
Query: 81 PDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
+ G K++KRTSI K LE +F QP+P+ +I+ +A+ L L+K VVR
Sbjct: 55 TSIDKMAAQGSKRKKRTSIEVSVKSMLEQHFLKQPKPAANEISGLADSLQLEKEVVR 111
>gi|351713127|gb|EHB16046.1| POU domain, class 5, transcription factor 1 [Heterocephalus glaber]
Length = 361
Score = 92.0 bits (227), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 7/122 (5%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L + G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGAI----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQRWVEEADNNNE 216
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + S++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 217 NLQERCKTESLMQA--RKRKRTSIENQVRGNLENMFLQCPKPTLQQISRIAQQLGLEKDV 274
Query: 136 VR 137
VR
Sbjct: 275 VR 276
>gi|426244694|ref|XP_004016155.1| PREDICTED: POU domain, class 2, transcription factor 3 [Ovis aries]
gi|402216192|gb|AFQ35837.1| POU class 2 homeobox 3 transcript variant 2 [Ovis aries]
Length = 396
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 161 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 217
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP P+ PA G K++KRTSI + +LE F P+PS E+I+
Sbjct: 218 SSPS----DPSMSTPNSYPALSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 273
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 274 IAEQLSMEKEVVR 286
>gi|1524014|emb|CAA49381.1| transcription factor [Girardia tigrina]
Length = 113
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 14/121 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM L+P+L WL EA++
Sbjct: 2 GFTQADVGLALGNLYGS---VFSQTTICRFEALQLSFKNMCKLRPLLGKWLLEADSTG-- 56
Query: 77 KRRDPDAPS----VLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
APS V AG K++KRTSI K +LE++F+ Q +P+ + I +A+ L L+
Sbjct: 57 -----CAPSGIDKVTAAGRKRKKRTSIEVGVKNALESHFSRQSKPTAQIITQLADNLGLE 111
Query: 133 K 133
K
Sbjct: 112 K 112
>gi|2506533|sp|P31362.2|PO2F3_MOUSE RecName: Full=POU domain, class 2, transcription factor 3; AltName:
Full=Epoc-1; AltName: Full=Octamer-binding protein 11;
Short=Oct-11; AltName: Full=Octamer-binding
transcription factor 11; Short=OTF-11
gi|388914|gb|AAA16855.1| base pairs 945-995 correspond to helical domain 3 of the protein
[Mus musculus]
Length = 431
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL + E
Sbjct: 194 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDPE 250
Query: 72 AQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP A PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 251 SSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 306
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 307 IAEQLSMEKEVVR 319
>gi|56694822|gb|AAW23073.1| POU3 [Oikopleura dioica]
Length = 468
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 69/122 (56%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAK 75
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WL+EA+ A
Sbjct: 314 GYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLSRWLDEADSATGG 370
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + G K++KRTSI K +LE F QP+PS +I AE L L+K V
Sbjct: 371 MPTIGGDKLNQQFQGRKRKKRTSIELSTKNALEMEFIKQPKPSAAEITNTAESLQLEKEV 430
Query: 136 VR 137
VR
Sbjct: 431 VR 432
>gi|431904020|gb|ELK09455.1| POU domain, class 2, transcription factor 3 [Pteropus alecto]
Length = 714
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 228 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAESSPS- 283
Query: 77 KRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 284 ---DPSVSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 340
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 341 SMEKEVVR 348
>gi|453684|gb|AAA31107.1| POU-domain, partial [Sus scrofa]
Length = 137
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 73/126 (57%), Gaps = 14/126 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 9 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 64
Query: 77 KRRDP--DAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP PS P G K+RKRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 65 ---DPSVSTPSSYPTLSEVFGRKRRKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 121
Query: 130 DLKKNV 135
++K V
Sbjct: 122 SMEKEV 127
>gi|148234823|ref|NP_001081342.1| POU class V protein oct-91 [Xenopus laevis]
gi|214923|gb|AAA49999.1| XOCT-91 [Xenopus laevis]
Length = 445
Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP+L++WL
Sbjct: 232 DLKHKRITMGYTQADVGYALGVLFGK---TFSQTTICRFESLQLSFKNMCKLKPLLRSWL 288
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
E E KN + ++P +K++ RTSI K +LE YF +PS ++IA IA
Sbjct: 289 HEVE-NNKNLQEIISRGQIIPQVQKRKHRTSIENNVKCTLENYFMQCSKPSAQEIAQIAR 347
Query: 128 KLDLKKNVVR 137
+L+++K+VVR
Sbjct: 348 ELNMEKDVVR 357
>gi|341876824|gb|EGT32759.1| hypothetical protein CAEBREN_17987 [Caenorhabditis brenneri]
Length = 381
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 207 GYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGS 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + AG K++KRTSI K LE +F +P+ ++IA++A +L L+K VV
Sbjct: 264 PNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQSNQKPNAQEIASVAMELQLEKEVV 322
Query: 137 R 137
R
Sbjct: 323 R 323
>gi|341901132|gb|EGT57067.1| CBN-CEH-6 protein [Caenorhabditis brenneri]
Length = 381
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 207 GYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGS 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + AG K++KRTSI K LE +F +P+ ++IA++A +L L+K VV
Sbjct: 264 PNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQSNQKPNAQEIASVAMELQLEKEVV 322
Query: 137 R 137
R
Sbjct: 323 R 323
>gi|293612267|gb|ADE48560.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLEKLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173381|gb|ADW77461.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173114|gb|ADW77336.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|195548120|gb|ACG49267.1| OCT4 [Bubalus bubalis]
Length = 180
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 5 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 59
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 60 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 117
Query: 136 VR 137
VR
Sbjct: 118 VR 119
>gi|29179580|gb|AAH49295.1| Pou5f1 protein [Danio rerio]
Length = 472
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ WL EAE ++N
Sbjct: 272 GFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSEN 327
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ V K+++R S+ + +LE+YF P+P+ +I I++ L L+++VV
Sbjct: 328 PQDMYKIERVFVDTRKRKRRASLEGTVRSALESYFVKCPKPNTLEITHISDDLGLERDVV 387
Query: 137 R 137
R
Sbjct: 388 R 388
>gi|12382246|gb|AAG53082.1|AF268613_1 POU 5 domain protein [Homo sapiens]
gi|293612277|gb|ADE48565.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612294|gb|ADE48573.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612313|gb|ADE48578.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612322|gb|ADE48582.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612337|gb|ADE48589.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612344|gb|ADE48592.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612348|gb|ADE48594.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612350|gb|ADE48595.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612385|gb|ADE48608.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173091|gb|ADW77328.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173093|gb|ADW77329.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173098|gb|ADW77330.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173108|gb|ADW77334.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173112|gb|ADW77335.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173125|gb|ADW77340.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173129|gb|ADW77342.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173131|gb|ADW77343.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173135|gb|ADW77345.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173137|gb|ADW77346.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173139|gb|ADW77347.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173144|gb|ADW77349.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173146|gb|ADW77350.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173189|gb|ADW77370.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173191|gb|ADW77371.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173193|gb|ADW77372.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173195|gb|ADW77373.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173197|gb|ADW77374.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173205|gb|ADW77378.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173207|gb|ADW77379.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173209|gb|ADW77380.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173211|gb|ADW77381.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173213|gb|ADW77382.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173216|gb|ADW77383.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173219|gb|ADW77384.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173237|gb|ADW77393.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173239|gb|ADW77394.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173243|gb|ADW77396.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173245|gb|ADW77397.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173249|gb|ADW77399.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173251|gb|ADW77400.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173253|gb|ADW77401.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173255|gb|ADW77402.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173257|gb|ADW77403.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173259|gb|ADW77404.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173264|gb|ADW77406.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173266|gb|ADW77407.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173270|gb|ADW77409.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173272|gb|ADW77410.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173277|gb|ADW77412.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173279|gb|ADW77413.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173281|gb|ADW77414.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173321|gb|ADW77433.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173327|gb|ADW77435.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173333|gb|ADW77438.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173342|gb|ADW77442.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173391|gb|ADW77465.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173514|gb|ADW77520.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173519|gb|ADW77522.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173525|gb|ADW77525.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|363742533|ref|XP_425799.3| PREDICTED: POU domain, class 2, transcription factor 3 [Gallus
gallus]
Length = 489
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 255 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAE 311
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ + PS P+ G K++KRTSI + +LE F P+PS E+I+ IA
Sbjct: 312 SAPLDSSMS--TPSSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQDNPKPSSEEISLIA 369
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 370 EQLSMEKEVVR 380
>gi|321173235|gb|ADW77392.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173106|gb|ADW77333.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|293612371|gb|ADE48603.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173336|gb|ADW77439.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173340|gb|ADW77441.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|293612306|gb|ADE48576.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173241|gb|ADW77395.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173262|gb|ADW77405.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173268|gb|ADW77408.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173274|gb|ADW77411.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|293612334|gb|ADE48588.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|293612309|gb|ADE48577.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGRVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173317|gb|ADW77432.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173325|gb|ADW77434.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173331|gb|ADW77437.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173338|gb|ADW77440.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|326933281|ref|XP_003212735.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Meleagris gallopavo]
Length = 539
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 305 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAE 361
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ + PS P+ G K++KRTSI + +LE F P+PS E+I+ IA
Sbjct: 362 SAPLDSSMS--TPSSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQDNPKPSSEEISLIA 419
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 420 EQLSMEKEVVR 430
>gi|268567672|ref|XP_002640055.1| C. briggsae CBR-CEH-6 protein [Caenorhabditis briggsae]
Length = 374
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 207 GYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGS 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + AG K++KRTSI K LE +F +P+ ++IA +A +L L+K VV
Sbjct: 264 PNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQANQKPNAQEIAQVAMELQLEKEVV 322
Query: 137 R 137
R
Sbjct: 323 R 323
>gi|321173386|gb|ADW77463.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173393|gb|ADW77466.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173431|gb|ADW77484.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173511|gb|ADW77519.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173521|gb|ADW77523.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173523|gb|ADW77524.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEDLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173247|gb|ADW77398.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|158836955|dbj|BAF91355.1| octamer-binding protein 4 [Oryctolagus cuniculus]
Length = 134
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 7 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 61
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 62 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDV 119
Query: 136 VR 137
VR
Sbjct: 120 VR 121
>gi|321270983|gb|ADW79373.1| nubbin [Acheta domesticus]
Length = 129
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 11 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSALAN 67
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
P A P P G +++KRTSI + +LE F P+P+ E+IA +AE L +
Sbjct: 68 ----PGALTNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVHYPKPTSEEIALLAESLSM 123
Query: 132 KKNVVR 137
+K VVR
Sbjct: 124 EKEVVR 129
>gi|334311989|ref|XP_003339690.1| PREDICTED: POU domain, class 5, transcription factor 1.1-like
[Monodelphis domestica]
Length = 452
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL L G + SQ+TICRFE+L LS NM LKP+LQ WL+ E +
Sbjct: 258 GFTQADVGMALGTL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLQAVE-NTE 312
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + VL K+++RTSI K +LE +F +P+ ++I +AE+L L K+V
Sbjct: 313 NPQEMCSMEQVLAQARKRKRRTSIETSVKGTLEGFFRRCGKPTPQQICDLAEELHLDKDV 372
Query: 136 VR 137
VR
Sbjct: 373 VR 374
>gi|321173103|gb|ADW77332.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|321173516|gb|ADW77521.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173527|gb|ADW77526.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQRWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|113927882|dbj|BAF30835.1| octamer-binding transcription factor-3B [Macaca fascicularis]
Length = 265
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 66 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 120
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + SLE F P+P+ ++I+ IA++L L+K+V
Sbjct: 121 NLQEICKAETLVQA--RKRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDV 178
Query: 136 VR 137
VR
Sbjct: 179 VR 180
>gi|321173427|gb|ADW77482.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|345319715|ref|XP_001514263.2| PREDICTED: POU domain, class 2, transcription factor 3-like,
partial [Ornithorhynchus anatinus]
Length = 314
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 80 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAE 136
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ + + P+ P+ G K++KRTSI + +LE F P+PS E+I IA
Sbjct: 137 SSPSDSAVN--TPNAYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQENPKPSSEEITMIA 194
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 195 EQLSMEKEVVR 205
>gi|380803499|gb|AFE73625.1| POU domain, class 3, transcription factor 3, partial [Macaca
mulatta]
Length = 245
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 71/118 (60%), Gaps = 8/118 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 133 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 189
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
P + + A G K++KRTSI K +LE++F P+PS +I +A+ L L+K
Sbjct: 190 ----PTSIDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQLEK 243
>gi|293612271|gb|ADE48562.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQATICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|1323760|gb|AAB00434.1| Brn-1.2 POU domain, partial [Danio rerio]
Length = 113
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 73/119 (61%), Gaps = 8/119 (6%)
Query: 19 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 78
TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ + +
Sbjct: 2 TQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTSGS-- 56
Query: 79 RDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
P + + A G K++KRTSI K +LE++F P+P +I ++A+ L L+K VV
Sbjct: 57 --PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPGASEINSLADSLQLEKEVV 113
>gi|242014342|ref|XP_002427850.1| protein nubbin, putative [Pediculus humanus corporis]
gi|212512319|gb|EEB15112.1| protein nubbin, putative [Pediculus humanus corporis]
Length = 447
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 271 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSLTN 327
Query: 77 KRRDPDAPSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ P P G +++KRTSI + +LE F P+P+ E+IA +A+ L ++K
Sbjct: 328 PNSLTN-PLTTPEAIGRRRKKRTSIETTVRVALEKAFLQNPKPTSEEIAVLADNLTMEKE 386
Query: 135 VVR 137
VVR
Sbjct: 387 VVR 389
>gi|241737313|ref|XP_002414009.1| pou2, putative [Ixodes scapularis]
gi|215507863|gb|EEC17317.1| pou2, putative [Ixodes scapularis]
Length = 425
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 73/122 (59%), Gaps = 4/122 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+LQ WLE+A+A N
Sbjct: 203 GFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLQRWLEDADASLNN 259
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+A + + G +++KRTSI + +LE F P+P+ E+IA +AE L ++K V
Sbjct: 260 PAALANAHTTPESIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEIAVLAEGLSMEKEV 319
Query: 136 VR 137
VR
Sbjct: 320 VR 321
>gi|321173379|gb|ADW77460.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQGTCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|269959231|gb|ACZ54718.1| POU2 [Macropus eugenii]
Length = 442
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL L G + SQ+TICRFE+L LS NM LKP+LQ WL+ E
Sbjct: 248 GFTQADVGMALGTL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLQAVE-NTD 302
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + VL K+++RTSI K +LE +F +P+ ++I +AE+L L K+V
Sbjct: 303 NPQEMCSMEQVLAQARKRKRRTSIETSVKGTLEGFFRRCGKPTPQQICDLAEELHLDKDV 362
Query: 136 VR 137
VR
Sbjct: 363 VR 364
>gi|321173383|gb|ADW77462.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173388|gb|ADW77464.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQGTCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|449267410|gb|EMC78355.1| POU domain, class 2, transcription factor 3, partial [Columba
livia]
Length = 428
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 194 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAE 250
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ + P+ P+ G K++KRTSI + +LE F P+PS E+I+ IA
Sbjct: 251 SAPLDSSMS--TPNSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQDNPKPSSEEISLIA 308
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 309 EQLSMEKEVVR 319
>gi|194212782|ref|XP_001501310.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Equus
caballus]
Length = 686
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 75/133 (56%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 451 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 507
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 508 SSPS----DPSMSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 563
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 564 IAEQLSMEKEVVR 576
>gi|83318947|emb|CAJ38811.1| Pit1 protein [Platynereis dumerilii]
Length = 334
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 11 SRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEA 70
SR + G TQ +VG ALA + SQ+TICRFE+L LS+ N L+PIL+ WLE+A
Sbjct: 174 SRRIKLGFTQTNVGNALARVH---GSVFSQTTICRFENLQLSYKNACKLRPILEQWLEDA 230
Query: 71 EAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
E ++ + + ++++RT+I+ K +LE +F QP+PS I IA L
Sbjct: 231 ERAYQDDKNG-------MSDRRRKRRTTISVLAKDALERHFCRQPKPSSHDICRIAGALH 283
Query: 131 LKKNVVR 137
L K VVR
Sbjct: 284 LDKEVVR 290
>gi|930192|emb|CAA36219.1| Oct11 POU-box protein (119 AA) [Mus musculus]
Length = 119
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 14/126 (11%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 77
TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 1 FTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS-- 55
Query: 78 RRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
DP A PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 56 --DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLS 113
Query: 131 LKKNVV 136
++K VV
Sbjct: 114 MEKEVV 119
>gi|449489457|ref|XP_002190945.2| PREDICTED: POU domain, class 2, transcription factor 3-like
[Taeniopygia guttata]
Length = 439
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 205 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAE 261
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ + P+ P+ G K++KRTSI + +LE F P+PS E+I+ IA
Sbjct: 262 SAPLDSSMS--TPNSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQDNPKPSSEEISLIA 319
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 320 EQLSMEKEVVR 330
>gi|156392214|ref|XP_001635944.1| predicted protein [Nematostella vectensis]
gi|156223042|gb|EDO43881.1| predicted protein [Nematostella vectensis]
Length = 162
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 10/128 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L LSQ+TICRFE+L LS NM LKP+LQ WL+E +A +
Sbjct: 24 GFTQADVGVALGTLY---GNVLSQTTICRFEALQLSLKNMCKLKPLLQKWLQETDASSSG 80
Query: 77 ----KRRDPDAPSVLPAG---EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
K+++P + +K+++RT I K LE +F PRPS I+++AE L
Sbjct: 81 HEGEKQQNPSNFAFATHNGPYKKRKRRTIIEKNVKGVLENHFEKMPRPSTSDISSLAESL 140
Query: 130 DLKKNVVR 137
L + VVR
Sbjct: 141 GLDREVVR 148
>gi|348527940|ref|XP_003451477.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Oreochromis niloticus]
Length = 393
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 177 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSD 233
Query: 77 KRRDPDA-PSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ + P+++ G K++KRTSI K +LE F P+P+ E+I I+E+L ++K
Sbjct: 234 TMSNSSSLPTLMEGYGRKRKKRTSIETNIKMTLEKRFLDNPKPNSEEITLISEQLSMEKE 293
Query: 135 VVR 137
VVR
Sbjct: 294 VVR 296
>gi|395506476|ref|XP_003757558.1| PREDICTED: POU domain, class 5, transcription factor 1.1-like
[Sarcophilus harrisii]
Length = 445
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL L G + SQ+TICRFE+L LS NM LKP+LQ WL+ E
Sbjct: 251 GFTQADVGMALGTL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLQAVE-NTD 305
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + VL K+++RTSI K +LE +F +P+ ++I +AE+L L K+V
Sbjct: 306 NPQEMCSMEQVLAQARKRKRRTSIETSVKGTLEGFFRRCGKPTPQQICDLAEELHLDKDV 365
Query: 136 VR 137
VR
Sbjct: 366 VR 367
>gi|156353429|ref|XP_001623068.1| predicted protein [Nematostella vectensis]
gi|156209723|gb|EDO30968.1| predicted protein [Nematostella vectensis]
Length = 146
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 10/128 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L LSQ+TICRFE+L LS NM LKP+LQ WL+E +A +
Sbjct: 8 GFTQADVGVALGTLY---GNVLSQTTICRFEALQLSLKNMCKLKPLLQKWLQETDASSSG 64
Query: 77 ----KRRDPDAPSVLPAG---EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
K+++P + +K+++RT I K LE +F PRPS I+++AE L
Sbjct: 65 HEGEKQQNPSNFAFATHNGPYKKRKRRTIIEKNVKGVLENHFEKMPRPSTSDISSLAESL 124
Query: 130 DLKKNVVR 137
L + VVR
Sbjct: 125 GLDREVVR 132
>gi|301299075|gb|ADK66882.1| Oct1/2 transcription factor [Paracentrotus lividus]
gi|333362450|gb|AEF30405.1| Oct1/2 [Paracentrotus lividus]
Length = 802
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 76/128 (59%), Gaps = 17/128 (13%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ N
Sbjct: 488 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADTTVAN 544
Query: 77 KRRDPDAPSVL-----PAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
P++L P G +++KRTSI + SLE F QP+P+ E+IA + E+L
Sbjct: 545 -------PALLGPHNSPEGINRRRKKRTSIETNIRISLEKSFLTQPKPTSEEIAILGEQL 597
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 598 GMEKEVVR 605
>gi|348513853|ref|XP_003444455.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Oreochromis niloticus]
Length = 460
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 77/122 (63%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ+DVG +L +L G + SQ+TICRFE+L LS NM LKP+LQ WL+EAE ++
Sbjct: 268 GFTQSDVGLSLGSL----YGKMFSQTTICRFEALQLSFKNMCKLKPLLQKWLDEAE-NSE 322
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + V K+++RTS+ + +LE+YF P+P+ + I I++ L L+++V
Sbjct: 323 NPQDMYKIERVFVDTRKRKRRTSLEGAVRAALESYFIKCPKPNTQAIKHISDDLGLERDV 382
Query: 136 VR 137
VR
Sbjct: 383 VR 384
>gi|281312443|sp|B7ZQA9.1|P5F12_XENLA RecName: Full=POU domain, class 5, transcription factor 1.2;
AltName: Full=POU class V protein oct-91; Short=XlPOU91;
Short=Xoct-91
gi|213623434|gb|AAI69743.1| Xoct-91 protein [Xenopus laevis]
gi|213626624|gb|AAI69741.1| Xoct-91 protein [Xenopus laevis]
Length = 445
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP+L++WL
Sbjct: 232 DLKHKRITMGYTQADVGYALGVLFGK---TFSQTTICRFESLQLSFKNMCKLKPLLRSWL 288
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
E E +N + ++P +K++ RTSI K +LE YF +PS ++IA IA
Sbjct: 289 HEVE-NNENLQEIISRGQIIPQVQKRKHRTSIENNVKCTLENYFMQCSKPSAQEIAQIAR 347
Query: 128 KLDLKKNVVR 137
+L+++K+VVR
Sbjct: 348 ELNMEKDVVR 357
>gi|170032369|ref|XP_001844054.1| nubbin [Culex quinquefasciatus]
gi|167872340|gb|EDS35723.1| nubbin [Culex quinquefasciatus]
Length = 507
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 76/129 (58%), Gaps = 11/129 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ +N
Sbjct: 317 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSIQN 373
Query: 77 KRRDPDAPSVLP--------AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+PS L G +++KRTSI + +LE F V +P+ E+I ++A+
Sbjct: 374 PGGRMFSPSALTNTATTPEIVGRRRKKRTSIETSVRVALEKAFLVNSKPTSEEITSLADS 433
Query: 129 LDLKKNVVR 137
L ++K VVR
Sbjct: 434 LCMEKEVVR 442
>gi|334191630|gb|AEG66930.1| POU domian transcription factor Polynem [Hydractinia echinata]
Length = 426
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ+DVG L +L SQ+TICRFE+L LS NM L+P+L WL+E +
Sbjct: 243 GFTQSDVGLGLGSLY---GNIFSQTTICRFEALQLSFKNMCKLQPLLVKWLDEMDNNFLG 299
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + ++ PA K++KRTSI K +LE YF +PSG I IA +L+L+K VV
Sbjct: 300 TE-NATSRNLFPA-RKRKKRTSIDLTLKETLEMYFIKHQKPSGHDITEIAMQLNLEKEVV 357
Query: 137 R 137
R
Sbjct: 358 R 358
>gi|321173435|gb|ADW77486.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|345788576|ref|XP_853428.2| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 4, transcription
factor 1 [Canis lupus familiaris]
Length = 308
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/56 (80%), Positives = 47/56 (83%)
Query: 82 DAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
+ P +L GEKK KRTS APEKRSLEA FAVQPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 234 NKPEILNGGEKKSKRTSFGAPEKRSLEAXFAVQPRPSSEKIAAIAEKLDLKKNVVR 289
>gi|308499925|ref|XP_003112148.1| CRE-CEH-6 protein [Caenorhabditis remanei]
gi|308268629|gb|EFP12582.1| CRE-CEH-6 protein [Caenorhabditis remanei]
Length = 375
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 201 GYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGS 257
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + AG K++KRTSI K LE +F +P+ ++I +A +L L+K VV
Sbjct: 258 PNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQANQKPNAQEIGQVAMELQLEKEVV 316
Query: 137 R 137
R
Sbjct: 317 R 317
>gi|321173127|gb|ADW77341.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173133|gb|ADW77344.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173141|gb|ADW77348.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173433|gb|ADW77485.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 154 GYTQADVGLILGVL---FEKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 209
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+VV
Sbjct: 210 LQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVV 267
Query: 137 R 137
R
Sbjct: 268 R 268
>gi|293612232|gb|ADE48544.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG AL L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLALGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|149023899|gb|EDL80396.1| rCG30866 [Rattus norvegicus]
Length = 457
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 74/132 (56%), Gaps = 12/132 (9%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPE------KRSLEAYFAVQPRPSGEKIAAI 125
+ + + + + G K++KRTSI K +LE++F P+PS +I +
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVXXXXXXXVKGALESHFLKCPKPSAHEITGL 378
Query: 126 AEKLDLKKNVVR 137
A+ L L+K VVR
Sbjct: 379 ADSLQLEKEVVR 390
>gi|15277218|dbj|BAB63311.1| POU-type homeodomain-containing DNA-binding protein [Homo sapiens]
gi|27544423|dbj|BAC54946.1| POU domain, class 5, transcription factor 1 [Homo sapiens]
gi|119623773|gb|EAX03368.1| POU domain, class 5, transcription factor 1, isoform CRA_c [Homo
sapiens]
gi|272718625|gb|ACZ95700.1| POU class 5 homeobox 1 transcript variant 2 [Homo sapiens]
Length = 265
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 66 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 120
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 121 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 178
Query: 136 VR 137
VR
Sbjct: 179 VR 180
>gi|321173429|gb|ADW77483.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/121 (45%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 154 GYTQADVGLILGVL---FEKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 209
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+VV
Sbjct: 210 LQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVV 267
Query: 137 R 137
R
Sbjct: 268 R 268
>gi|288869|emb|CAA77952.1| octamer binding protein 3B [Homo sapiens]
Length = 265
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 66 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 120
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 121 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 178
Query: 136 VR 137
VR
Sbjct: 179 VR 180
>gi|293612299|gb|ADE48574.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173199|gb|ADW77375.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173201|gb|ADW77376.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173203|gb|ADW77377.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ W EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKWEEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|402866391|ref|XP_003897368.1| PREDICTED: POU domain, class 5, transcription factor 1 [Papio
anubis]
gi|217035847|gb|ACJ74396.1| POU class 5 homeobox 1 [Macaca mulatta]
Length = 360
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + SLE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|340629179|gb|AEK64516.1| POU domain class 5 transcription factor 1 [Capra hircus]
Length = 360
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|444727343|gb|ELW67842.1| POU domain, class 5, transcription factor 1 [Tupaia chinensis]
Length = 227
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 28 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 82
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I IA++L L+K+V
Sbjct: 83 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENMFLQCPKPTLQQIGHIAQQLGLEKDV 140
Query: 136 VR 137
VR
Sbjct: 141 VR 142
>gi|113927880|dbj|BAF30834.1| octamer-binding transcription factor-3A [Macaca fascicularis]
gi|115500954|dbj|BAF34147.1| POU domain class 5 transcription factor 1 [Macaca fascicularis]
gi|355561517|gb|EHH18149.1| Octamer-binding transcription factor 3 [Macaca mulatta]
Length = 360
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + SLE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|14279704|gb|AAK58698.1| Pdm protein [Porcellio scaber]
Length = 138
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE----- 71
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 10 GFTQGDVGLAMG--KLYG-NDFSQATISRFEALNLSFKNMCKLKPLLQKWLEDADKTITD 66
Query: 72 -AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
A N PD G +++KRTSI + +LE F P+P+ E+I+ +A+ L
Sbjct: 67 PATLNNPLTSPDT-----IGRRRKKRTSIETSVRVALERAFLTNPKPTSEEISMLADSLT 121
Query: 131 LKKNVVR 137
++K VVR
Sbjct: 122 MEKEVVR 128
>gi|293612244|gb|ADE48550.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|334330119|ref|XP_001380318.2| PREDICTED: POU domain, class 2, transcription factor 3-like
[Monodelphis domestica]
Length = 455
Score = 89.4 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 222 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 278
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ + APS P+ G K++KRTSI + +LE F P+PS E+I+ IA
Sbjct: 279 SSPSDS--TVSAPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISLIA 336
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 337 EQLSMEKEVVR 347
>gi|387942549|ref|NP_001252513.1| POU domain, class 5, transcription factor 1 [Callithrix jacchus]
gi|340744006|dbj|BAK53234.1| POU domain containing class 5 transcription factor 1 [Callithrix
jacchus]
gi|381141669|gb|AFF57805.1| OCT4 [Callithrix jacchus]
Length = 360
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + SLE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|169234976|ref|NP_001108427.1| POU domain, class 5, transcription factor 1 [Macaca mulatta]
gi|62510911|sp|Q5TM49.1|PO5F1_MACMU RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding protein 4; Short=Oct-4; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|55700790|dbj|BAD69745.1| transcription factor 1 [Macaca mulatta]
Length = 360
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + SLE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|354487500|ref|XP_003505911.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Cricetulus griseus]
gi|344252959|gb|EGW09063.1| POU domain, class 5, transcription factor 1 [Cricetulus griseus]
Length = 358
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 159 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLEKWVEEAD-NNE 213
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+PS ++I+AIA++L L+K+V
Sbjct: 214 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENMFLQCPKPSLQQISAIADQLGLEKDV 271
Query: 136 VR 137
VR
Sbjct: 272 VR 273
>gi|322785480|gb|EFZ12149.1| hypothetical protein SINV_04192 [Solenopsis invicta]
Length = 398
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 274 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 326
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P++ P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 327 SLNNPNSLTNPLTTPEAIGRRRKKRTSIETSVRVALEKAFIQNPKPTSEEITMLADSLAM 386
Query: 132 KKNVVR 137
+K VVR
Sbjct: 387 EKEVVR 392
>gi|17506277|ref|NP_492304.1| Protein CEH-6 [Caenorhabditis elegans]
gi|21264443|sp|P20268.3|HM06_CAEEL RecName: Full=Homeobox protein ceh-6
gi|9966509|gb|AAG10298.1|AF286377_1 POU family III homeodomain protein CEH-6 [Caenorhabditis elegans]
gi|14530517|emb|CAB00031.2| Protein CEH-6 [Caenorhabditis elegans]
Length = 380
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 210 GYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGS 266
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + AG K++KRTSI K LE +F +P+ ++I +A +L L+K VV
Sbjct: 267 PNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQSNQKPNAQEITQVAMELQLEKEVV 325
Query: 137 R 137
R
Sbjct: 326 R 326
>gi|321173483|gb|ADW77508.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173485|gb|ADW77509.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173487|gb|ADW77510.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS N+ L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNVCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|444725260|gb|ELW65833.1| POU domain, class 2, transcription factor 3, partial [Tupaia
chinensis]
Length = 340
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 75/128 (58%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 152 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS- 207
Query: 77 KRRDPDAPSV--LPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP A + P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 208 ---DPSASTANSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 264
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 265 SMEKEVVR 272
>gi|301602457|gb|ADK79126.1| POU class 5 homeobox 1 [Bubalus bubalis]
gi|315493598|gb|ADU33030.1| POU class 5 homeobox 1 [Bubalus bubalis]
gi|315493600|gb|ADU33031.1| POU class 5 homeobox 1 [Bubalus bubalis]
Length = 360
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|22759535|emb|CAD22167.1| POU domain protein 4 [Sus scrofa]
Length = 283
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/122 (41%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 168 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 224
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 225 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 281
Query: 132 KK 133
+K
Sbjct: 282 EK 283
>gi|340712794|ref|XP_003394940.1| PREDICTED: hypothetical protein LOC100644394 isoform 2 [Bombus
terrestris]
Length = 517
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 310 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 362
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P++ P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 363 SLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADTLAM 422
Query: 132 KKNVVR 137
+K VVR
Sbjct: 423 EKEVVR 428
>gi|363418477|gb|AEW23226.1| POU class 5 homeobox 1 transcription factor [Bubalus bubalis]
Length = 360
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|350408989|ref|XP_003488574.1| PREDICTED: hypothetical protein LOC100749404 [Bombus impatiens]
Length = 517
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 310 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 362
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P++ P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 363 SLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADTLAM 422
Query: 132 KKNVVR 137
+K VVR
Sbjct: 423 EKEVVR 428
>gi|293612320|gb|ADE48581.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612326|gb|ADE48584.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612328|gb|ADE48585.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|293612332|gb|ADE48587.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L S NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQHSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRARGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|395526854|ref|XP_003765570.1| PREDICTED: pituitary-specific positive transcription factor 1
[Sarcophilus harrisii]
Length = 286
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE Q
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAE-QVGA 202
Query: 77 KRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + A E+KRKR T+I+ K +LE YF Q +PS ++I +AE L+L+K V
Sbjct: 203 LYNDK-----VGANERKRKRRTTISIAAKEALERYFGGQSKPSSQEIMRMAEGLNLEKEV 257
Query: 136 VR 137
VR
Sbjct: 258 VR 259
>gi|345495457|ref|XP_001602856.2| PREDICTED: protein nubbin-like [Nasonia vitripennis]
Length = 516
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 301 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 353
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P++ P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 354 SLNNPNSLSNPMTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITILADSLAM 413
Query: 132 KKNVVR 137
+K VVR
Sbjct: 414 EKEVVR 419
>gi|327276180|ref|XP_003222848.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Anolis
carolinensis]
Length = 436
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G Q DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 202 RRINLGFPQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAE 258
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ +P+ PA G K++KRTSI + +LE F P+PS E+I+ IA
Sbjct: 259 NSPLDSSVS--SPANYPAVNEMFGRKRKKRTSIETNIRSTLEKRFQDNPKPSSEEISMIA 316
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 317 EQLSMEKEVVR 327
>gi|334346736|ref|XP_003341843.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Monodelphis domestica]
Length = 312
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE Q
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAE-QVGA 228
Query: 77 KRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + A E+KRKR T+I+ K +LE YF Q +PS ++I +AE L+L+K V
Sbjct: 229 LYNDK-----VGANERKRKRRTTISIAAKEALERYFGGQSKPSSQEIMRMAEGLNLEKEV 283
Query: 136 VR 137
VR
Sbjct: 284 VR 285
>gi|293612260|gb|ADE48558.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGAL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|163915181|ref|NP_001106531.1| POU domain, class 5, transcription factor 1 [Sus scrofa]
gi|28201856|sp|Q9TSV5.1|PO5F1_PIG RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding protein 4; Short=Oct-4; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|6624733|emb|CAB63862.1| putative octamer-binding protein 3B [Sus scrofa]
Length = 360
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|296474230|tpg|DAA16345.1| TPA: POU domain, class 5, transcription factor 1 [Bos taurus]
Length = 360
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|27807049|ref|NP_777005.1| POU domain, class 5, transcription factor 1 [Bos taurus]
gi|28201857|sp|O97552.1|PO5F1_BOVIN RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|4103382|gb|AAD01757.1| POU5F1 [Bos taurus]
Length = 360
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|224459210|gb|ACN43340.1| nubbin [Tribolium castaneum]
Length = 228
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 107 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTLTN 163
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
P A P P G +++KRTSI + +LE F P+P+ E+I+ +A+ L +
Sbjct: 164 ----PGALSNPMTTPETIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEISMLADGLCM 219
Query: 132 KKNVVR 137
+K VVR
Sbjct: 220 EKEVVR 225
>gi|383847571|ref|XP_003699426.1| PREDICTED: uncharacterized protein LOC100875025 [Megachile
rotundata]
Length = 516
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 309 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 361
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P++ P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 362 SLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFMQNPKPTSEEITVLADSLAM 421
Query: 132 KKNVVR 137
+K VVR
Sbjct: 422 EKEVVR 427
>gi|333973470|gb|AEG42188.1| Oct4 [Capra hircus]
Length = 360
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|426250588|ref|XP_004019017.1| PREDICTED: POU domain, class 5, transcription factor 1 [Ovis aries]
Length = 360
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|307174898|gb|EFN65159.1| POU domain, class 2, transcription factor 1 [Camponotus floridanus]
Length = 512
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 305 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 357
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P++ P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 358 SLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFIQNPKPTSEEITILADSLAM 417
Query: 132 KKNVVR 137
+K VVR
Sbjct: 418 EKEVVR 423
>gi|395831943|ref|XP_003789042.1| PREDICTED: POU domain, class 5, transcription factor 1 [Otolemur
garnettii]
Length = 359
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 160 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 214
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 215 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|293612229|gb|ADE48543.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|126336920|ref|XP_001379871.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Monodelphis domestica]
Length = 286
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 73/122 (59%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE Q
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAE-QVGA 202
Query: 77 KRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
D + A E+KRKR T+I+ K +LE YF Q +PS ++I +AE L+L+K V
Sbjct: 203 LYNDK-----VGANERKRKRRTTISIAAKEALERYFGGQSKPSSQEIMRMAEGLNLEKEV 257
Query: 136 VR 137
VR
Sbjct: 258 VR 259
>gi|38502936|sp|Q7YR49.1|PO5F1_PANTR RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|32127774|dbj|BAC78165.1| POU-type homeodomain-containing DNA-binding protein [Pan
troglodytes]
Length = 360
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|321173063|gb|ADW77315.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|321173058|gb|ADW77313.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|293612256|gb|ADE48556.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|119623771|gb|EAX03366.1| POU domain, class 5, transcription factor 1, isoform CRA_a [Homo
sapiens]
Length = 361
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 162 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 216
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 217 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 274
Query: 136 VR 137
VR
Sbjct: 275 VR 276
>gi|426352327|ref|XP_004043665.1| PREDICTED: POU domain, class 5, transcription factor 1 [Gorilla
gorilla gorilla]
gi|293612222|gb|ADE48540.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|42560248|ref|NP_002692.2| POU domain, class 5, transcription factor 1 isoform 1 [Homo
sapiens]
gi|354721190|ref|NP_001238970.1| POU domain, class 5, transcription factor 1 [Pan troglodytes]
gi|397471609|ref|XP_003807379.1| PREDICTED: POU domain, class 5, transcription factor 1 [Pan
paniscus]
gi|400659|sp|Q01860.1|PO5F1_HUMAN RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=Octamer-binding protein 3; Short=Oct-3; AltName:
Full=Octamer-binding protein 4; Short=Oct-4; AltName:
Full=Octamer-binding transcription factor 3; Short=OTF-3
gi|35169|emb|CAA77951.1| octamer binding protein 3A [Homo sapiens]
gi|86197978|dbj|BAE78630.1| POU domain, class 5, transcription factor 1 [Homo sapiens]
gi|90960929|dbj|BAE92816.1| POU domain, class 5, transcription factor 1, isoform 2 [Pan
troglodytes]
gi|90960932|dbj|BAE92818.1| POU domain, class 5, transcription factor 1, isoform 2 [Pan
troglodytes]
gi|109658914|gb|AAI17438.1| POU class 5 homeobox 1 [Homo sapiens]
gi|109659100|gb|AAI17436.1| POU class 5 homeobox 1 [Homo sapiens]
gi|114306804|dbj|BAF31281.1| OTF3 protein [Homo sapiens]
gi|119623772|gb|EAX03367.1| POU domain, class 5, transcription factor 1, isoform CRA_b [Homo
sapiens]
gi|261859842|dbj|BAI46443.1| POU class 5 homeobox 1 [synthetic construct]
gi|272718624|gb|ACZ95699.1| POU class 5 homeobox 1 transcript variant 1 [Homo sapiens]
gi|293612220|gb|ADE48539.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612225|gb|ADE48541.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612227|gb|ADE48542.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612234|gb|ADE48545.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612238|gb|ADE48547.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612250|gb|ADE48553.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612258|gb|ADE48557.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|293612262|gb|ADE48559.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|313882978|gb|ADR82975.1| POU class 5 homeobox 1 [synthetic construct]
gi|313883682|gb|ADR83327.1| POU class 5 homeobox 1 [synthetic construct]
gi|321173061|gb|ADW77314.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173065|gb|ADW77316.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173069|gb|ADW77318.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173074|gb|ADW77320.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173076|gb|ADW77321.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173078|gb|ADW77322.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173080|gb|ADW77323.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173083|gb|ADW77324.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173085|gb|ADW77325.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173087|gb|ADW77326.1| POU domain transcription factor OCT4 [Homo sapiens]
gi|321173089|gb|ADW77327.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|62821798|ref|NP_001015510.1| major octamer-binding protein [Strongylocentrotus purpuratus]
Length = 729
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ N
Sbjct: 466 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADTTVSN 522
Query: 77 KRRDPDAPSVLPAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
P P G +++KRTSI + SLE F +QP+P+ E+I + E++ ++K
Sbjct: 523 PAL--LGPHNSPEGINRRRKKRTSIETNIRISLEKSFLMQPKPTSEEIVLLGEQMGMEKE 580
Query: 135 VVR 137
VVR
Sbjct: 581 VVR 583
>gi|293612240|gb|ADE48548.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|321173067|gb|ADW77317.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|293612248|gb|ADE48552.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|293612252|gb|ADE48554.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|293612236|gb|ADE48546.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|291045104|ref|NP_001166912.1| POU domain, class 5, transcription factor 1 [Felis catus]
gi|264670131|gb|ACY72350.1| POU domain class 5 transcription factor 1 [Felis catus]
Length = 360
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|266634527|dbj|BAI49421.1| POU class 5 homeobox 1 [Microcebus murinus]
Length = 359
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 160 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 214
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 215 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|332020471|gb|EGI60886.1| POU domain, class 2, transcription factor 1 [Acromyrmex echinatior]
Length = 563
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 361 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 413
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P++ P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 414 SLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKSFIQNPKPTSEEITILADSLAM 473
Query: 132 KKNVVR 137
+K VVR
Sbjct: 474 EKEVVR 479
>gi|328697316|ref|XP_001944692.2| PREDICTED: hypothetical protein LOC100164863 [Acyrthosiphon pisum]
Length = 624
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 12/131 (9%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL +A+
Sbjct: 424 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLVDAD 480
Query: 72 AQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ N P A P P G +++KRTSI + SLE F P+P+ E+I+ +A
Sbjct: 481 STMTN----PSALCNPLTTPEAIGRRRKKRTSIETSIRYSLEKAFRANPKPTSEEISILA 536
Query: 127 EKLDLKKNVVR 137
+ L ++K VVR
Sbjct: 537 DNLSMEKEVVR 547
>gi|297661206|ref|XP_002809144.1| PREDICTED: POU domain, class 5, transcription factor 1-like [Pongo
abelii]
Length = 360
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|443719204|gb|ELU09478.1| hypothetical protein CAPTEDRAFT_156286 [Capitella teleta]
Length = 353
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 77/123 (62%), Gaps = 6/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ + +
Sbjct: 115 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADTVSAS 171
Query: 75 KNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
N P +P L +++KRTSI + + +LE F V +PS E I+ +A++L++++
Sbjct: 172 SNLPGMPLSPDSL-GSRRRKKRTSIDSTIRVALEKSFLVNSKPSSEDISMLADRLNMERE 230
Query: 135 VVR 137
V+R
Sbjct: 231 VIR 233
>gi|14279708|gb|AAK58700.1| Pdm protein [Procambarus clarkii]
Length = 137
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 71/127 (55%), Gaps = 14/127 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE----- 71
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL +A+
Sbjct: 10 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLTDADKTISD 66
Query: 72 -AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
N PDA G +++KRTSI + +LE F P P+ E+I+ +A+ L
Sbjct: 67 PTTVSNSLSSPDA-----VGRRRKKRTSIETSVRVALERAFIQNPEPTSEEISMLADNLS 121
Query: 131 LKKNVVR 137
++K VVR
Sbjct: 122 MEKEVVR 128
>gi|441594509|ref|XP_003271964.2| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 5, transcription
factor 1 [Nomascus leucogenys]
Length = 341
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 142 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 196
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 197 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 254
Query: 136 VR 137
VR
Sbjct: 255 VR 256
>gi|149754664|ref|XP_001490158.1| PREDICTED: POU domain, class 5, transcription factor 1-like [Equus
caballus]
Length = 360
Score = 88.2 bits (217), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAENLVQA--RKRKRTSIETRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|91080429|ref|XP_968439.1| PREDICTED: similar to AGAP009500-PA [Tribolium castaneum]
Length = 578
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 395 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTLTN 451
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
P A P P G +++KRTSI + +LE F P+P+ E+I+ +A+ L +
Sbjct: 452 ----PGALSNPMTTPETIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEISMLADGLCM 507
Query: 132 KKNVVR 137
+K VVR
Sbjct: 508 EKEVVR 513
>gi|57094756|ref|XP_538830.1| PREDICTED: POU domain, class 5, transcription factor 1 [Canis lupus
familiaris]
Length = 360
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|301611068|ref|XP_002935067.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Xenopus (Silurana) tropicalis]
Length = 419
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/129 (42%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 186 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 242
Query: 72 AQAKNKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+ + P + G K++KRTSI + +LE F P+PS E+I+ IAE+
Sbjct: 243 SAPSDAALTPSTNYAQLSEMFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQ 302
Query: 129 LDLKKNVVR 137
L ++K VVR
Sbjct: 303 LVMEKEVVR 311
>gi|270006396|gb|EFA02844.1| nubbin [Tribolium castaneum]
Length = 543
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 360 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTLTN 416
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
P A P P G +++KRTSI + +LE F P+P+ E+I+ +A+ L +
Sbjct: 417 ----PGALSNPMTTPETIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEISMLADGLCM 472
Query: 132 KKNVVR 137
+K VVR
Sbjct: 473 EKEVVR 478
>gi|314122200|ref|NP_001038720.2| POU transcription factor isoform 2 [Danio rerio]
Length = 397
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 182 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSD 238
Query: 77 KRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ P + G K++KRTSI K +LE F P+P+ E+I I+E+L ++K
Sbjct: 239 TMTNTTTLPPLMEGYGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEITLISEQLAMEKE 298
Query: 135 VVR 137
VVR
Sbjct: 299 VVR 301
>gi|431907076|gb|ELK11194.1| Coiled-coil alpha-helical rod protein 1 [Pteropus alecto]
Length = 1105
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 163 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLQKWVEEAD-NNE 217
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I IA++L L+K+V
Sbjct: 218 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQIGHIAQQLGLEKDV 275
Query: 136 VR 137
VR
Sbjct: 276 VR 277
>gi|94573484|gb|AAI16524.1| Zgc:136377 [Danio rerio]
gi|182890844|gb|AAI65558.1| Zgc:136377 protein [Danio rerio]
Length = 397
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 182 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSD 238
Query: 77 KRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ + P + G +++KRTSI K +LE F P+P+ E+I I+E+L ++K
Sbjct: 239 TKTNTTTLPPLMEGYGRQRKKRTSIETNIKLTLEKRFLDNPKPNSEEITLISEQLAMEKE 298
Query: 135 VVR 137
VVR
Sbjct: 299 VVR 301
>gi|340712792|ref|XP_003394939.1| PREDICTED: hypothetical protein LOC100644394 isoform 1 [Bombus
terrestris]
Length = 555
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 343 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD 399
Query: 72 AQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N +P++ P P G +++KRTSI + +LE F P+P+ E+I +A
Sbjct: 400 ----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLA 455
Query: 127 EKLDLKKNVVR 137
+ L ++K VVR
Sbjct: 456 DTLAMEKEVVR 466
>gi|403308461|ref|XP_003944679.1| PREDICTED: POU domain, class 5, transcription factor 1 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|153791664|ref|NP_001093427.1| POU domain, class 5, transcription factor 1 [Oryctolagus cuniculus]
gi|122912967|gb|ABM68044.1| octamer binding transcription factor 4 [Oryctolagus cuniculus]
gi|124295259|gb|ABN04110.1| octamer binding transcription factor 4 [Oryctolagus cuniculus]
Length = 360
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|314122349|ref|NP_001186612.1| POU transcription factor isoform 1 [Danio rerio]
gi|120538152|gb|AAI29275.1| Zgc:136377 [Danio rerio]
Length = 398
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 72/123 (58%), Gaps = 5/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 183 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSD 239
Query: 77 KRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ P + G K++KRTSI K +LE F P+P+ E+I I+E+L ++K
Sbjct: 240 TMTNTTTLPPLMEGYGRKRKKRTSIETNIKLTLEKRFLDNPKPNSEEITLISEQLAMEKE 299
Query: 135 VVR 137
VVR
Sbjct: 300 VVR 302
>gi|356995854|ref|NP_001239381.1| POU domain, class 5, transcription factor 1 isoform 2 [Mus
musculus]
Length = 221
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 23 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD-NNE 77
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + +++ A +KRKRTSI + SLE F P+PS ++I IA +L L+K+V
Sbjct: 78 NLQEICKSETLVQA--RKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDV 135
Query: 136 VR 137
VR
Sbjct: 136 VR 137
>gi|380015441|ref|XP_003691710.1| PREDICTED: POU domain, class 2, transcription factor 3-like [Apis
florea]
Length = 514
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 307 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 359
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P + P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 360 SLNNPGSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADSLAM 419
Query: 132 KKNVVR 137
+K VVR
Sbjct: 420 EKEVVR 425
>gi|395520114|ref|XP_003764182.1| PREDICTED: POU domain, class 2, transcription factor 3 [Sarcophilus
harrisii]
Length = 437
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 57/131 (43%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 204 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 260
Query: 72 AQAKNKRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ + PS P+ G K++KRTSI + +LE F P+PS E+I+ IA
Sbjct: 261 SSPSDS--TVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISLIA 318
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 319 EQLSMEKEVVR 329
>gi|344307652|ref|XP_003422494.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Loxodonta africana]
Length = 357
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 157 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 211
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + ++L +KRKRTSI + SLE F P+PS ++I IA++L L+K+V
Sbjct: 212 NLQEICKTENLLQQA-RKRKRTSIENRVRGSLENLFLQCPKPSLQQIGHIAQQLGLEKDV 270
Query: 136 VR 137
VR
Sbjct: 271 VR 272
>gi|328777641|ref|XP_001122806.2| PREDICTED: POU domain, class 2, transcription factor 3-like [Apis
mellifera]
Length = 517
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 12/126 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ N
Sbjct: 310 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD----N 362
Query: 77 KRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+P + P P G +++KRTSI + +LE F P+P+ E+I +A+ L +
Sbjct: 363 SLNNPGSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFVQNPKPTSEEITVLADSLAM 422
Query: 132 KKNVVR 137
+K VVR
Sbjct: 423 EKEVVR 428
>gi|1772832|gb|AAD10203.1| POU [Gallus gallus]
Length = 154
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 10/123 (8%)
Query: 20 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 79
Q DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+ +
Sbjct: 1 QGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAESAPLDS-- 55
Query: 80 DPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
PS P+ G K++KRTSI + +LE F P+PS E+I+ IAE+L ++K
Sbjct: 56 SMSTPSSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQDNPKPSSEEISLIAEQLSMEKE 115
Query: 135 VVR 137
VVR
Sbjct: 116 VVR 118
>gi|307203154|gb|EFN82333.1| POU domain, class 2, transcription factor 1 [Harpegnathos saltator]
Length = 529
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 317 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD 373
Query: 72 AQAKNKRRDPDA---PSVLPA--GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N +P++ P P G +++KRTSI + +LE F P+P+ E+I +A
Sbjct: 374 ----NSLNNPNSLSNPLTTPEAIGRRRKKRTSIETSVRVALEKAFIQNPKPTSEEITILA 429
Query: 127 EKLDLKKNVVR 137
+ L ++K VVR
Sbjct: 430 DSLAMEKEVVR 440
>gi|432110436|gb|ELK34053.1| POU domain, class 2, transcription factor 3 [Myotis davidii]
Length = 301
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 74/130 (56%), Gaps = 16/130 (12%)
Query: 17 GVTQ--ADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA 74
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AEA
Sbjct: 129 GFTQVRGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAEASP 185
Query: 75 KNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP PS PA G K++KRTSI + +LE F P+PS E+I+ IAE
Sbjct: 186 A----DPSVSTPSAGPAFTEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAE 241
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 242 QLSMEKEVVR 251
>gi|291228292|ref|XP_002734113.1| PREDICTED: nubbin-like transcription factor, partial [Saccoglossus
kowalevskii]
Length = 272
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 14/123 (11%)
Query: 21 ADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN---- 76
DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 1 GDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSMTNPAVL 57
Query: 77 --KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
PD G +++KRTSI + +LE F P+P+ E+IA +A++L ++K
Sbjct: 58 GSPHTSPDG-----MGRRRKKRTSIETNVRAALEKSFMTNPKPTSEEIAMLADQLQMEKE 112
Query: 135 VVR 137
VVR
Sbjct: 113 VVR 115
>gi|334725236|gb|AEH03021.1| POU class 5 homeobox 1 [Bubalus bubalis]
Length = 360
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W EEA+
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWAEEAD-NND 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|344293200|ref|XP_003418312.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Loxodonta africana]
Length = 576
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 73/126 (57%), Gaps = 10/126 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+ +
Sbjct: 346 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPSD 402
Query: 77 KRRD-----PDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
P V G K++KRTSI + +LE F P+PS E+I+ IAE+L +
Sbjct: 403 SSVSTPSSYPTLSEVF--GRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSM 460
Query: 132 KKNVVR 137
+K VVR
Sbjct: 461 EKEVVR 466
>gi|116871388|gb|ABK30790.1| Oct4 [Microtus levis]
gi|117380638|gb|ABK34451.1| POU domain class 5 transcription factor 1 [Microtus levis]
Length = 354
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 155 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLEKWVEEAD-NNE 209
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 210 NLQEICKAETLVQA--RKRKRTSIENGVRGNLESMFLQCPKPTLQQISIIAKQLGLEKDV 267
Query: 136 VR 137
VR
Sbjct: 268 VR 269
>gi|403182801|gb|EJY57640.1| AAEL017445-PA [Aedes aegypti]
Length = 502
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 11/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 312 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD 368
Query: 72 AQAKNKRRDPDAPSVLPA--------GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ N +PS + + G +++KRTSI + +LE F V +P+ E+I
Sbjct: 369 SSISNPGGRIFSPSTIASTTPTPEMVGRRRKKRTSIETSVRVALEKAFLVNSKPTSEEIT 428
Query: 124 AIAEKLDLKKNVVR 137
+A+ L ++K VVR
Sbjct: 429 NLADNLCMEKEVVR 442
>gi|348567180|ref|XP_003469379.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Cavia porcellus]
Length = 317
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISISAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|432901517|ref|XP_004076874.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Oryzias latipes]
Length = 378
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE +
Sbjct: 164 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENSPSD 220
Query: 77 KRRDPDA--PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ P + G K++KRTSI K +LE F P+P+ E+I+ I+E+L ++K
Sbjct: 221 SMTSSSSLPPLMEGYGRKRKKRTSIETNIKMTLEKRFHDNPKPNSEEISLISEQLSMEKE 280
Query: 135 VVR 137
VVR
Sbjct: 281 VVR 283
>gi|348567178|ref|XP_003469378.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Cavia porcellus]
Length = 291
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISISAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|293612302|gb|ADE48575.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L S +M L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQHSFKDMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRARGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|88174215|gb|ABD39234.1| pituitary transcription factor 1 gamma variant [Ovis aries]
Length = 216
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 76/127 (59%), Gaps = 14/127 (11%)
Query: 14 LFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-- 71
+ G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 69 VMAGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQV 125
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+
Sbjct: 126 GALYNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELN 177
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 178 LEKEVVR 184
>gi|112421204|ref|NP_001036325.1| pituitary-specific positive transcription factor 1 [Macaca mulatta]
gi|1289508|gb|AAB51352.1| pit-1/GHF-1 [Macaca mulatta]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|296149175|gb|ADG96402.1| nubbin [Asellus aquaticus]
Length = 117
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 19 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE------A 72
TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ A
Sbjct: 2 TQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADKTMADPA 58
Query: 73 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
N PDA G +++KRTSI + +LE F P+P+ E+IA +A+ L ++
Sbjct: 59 TLNNPLTSPDA-----IGRRRKKRTSIETSVRVALERAFLRNPKPTSEEIAMLADSLSME 113
Query: 133 KNVV 136
K VV
Sbjct: 114 KEVV 117
>gi|293612246|gb|ADE48551.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQT--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|307335|gb|AAA60093.1| Pit-1/GHF-1 variant [Homo sapiens]
gi|311926|emb|CAA51017.1| transcription factor [Homo sapiens]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKYALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|395537161|ref|XP_003770573.1| PREDICTED: POU domain, class 5, transcription factor 1 isoform 2
[Sarcophilus harrisii]
Length = 342
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ WLE A+
Sbjct: 144 GYTQADVGITLGAL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWLEAADDN-D 198
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ + A +VL +KRKRTSI + +LE F P+P+ ++I+ IAE+L L+K+V
Sbjct: 199 HLQELCKAETVLQQA-RKRKRTSIENGVRGNLETMFLQCPKPTLQQISNIAEELGLEKDV 257
Query: 136 VR 137
VR
Sbjct: 258 VR 259
>gi|354501601|ref|XP_003512879.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Cricetulus griseus]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 77 KRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K V
Sbjct: 230 YSEK------VGANERKRKRRTTISIAAKDALERHFGQQSKPSSQEIMRMAEELNLEKEV 283
Query: 136 VR 137
VR
Sbjct: 284 VR 285
>gi|344277183|ref|XP_003410383.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Loxodonta africana]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|397523056|ref|XP_003831561.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Pan paniscus]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|426341281|ref|XP_004035971.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Gorilla gorilla gorilla]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|332864297|ref|XP_003318250.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Pan troglodytes]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|13431774|sp|Q28503.2|PIT1_MACMU RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|344277181|ref|XP_003410382.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Loxodonta africana]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|297670610|ref|XP_002813456.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Pongo abelii]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|195171904|ref|XP_002026742.1| GL13276 [Drosophila persimilis]
gi|194111676|gb|EDW33719.1| GL13276 [Drosophila persimilis]
Length = 681
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 3/99 (3%)
Query: 39 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRTS 98
+++TICRFE+L LS NM LKP+LQ WLEEA++ + + G K++KRTS
Sbjct: 285 ARTTICRFEALQLSFKNMCKLKPLLQKWLEEADSTTGSPT---SIDKIAAQGRKRKKRTS 341
Query: 99 IAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
I K +LE +F QP+PS ++I+++A+ L L+K VVR
Sbjct: 342 IEVSVKGALEQHFHKQPKPSAQEISSLADSLQLEKEVVR 380
>gi|170650730|ref|NP_001116229.1| pituitary-specific positive transcription factor 1 isoform beta
[Homo sapiens]
gi|488129|dbj|BAA02291.1| pituitary-specific POU-domain DNA binding factor [Homo sapiens]
gi|119589273|gb|EAW68867.1| POU domain, class 1, transcription factor 1 (Pit1, growth hormone
factor 1), isoform CRA_b [Homo sapiens]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|332212154|ref|XP_003255185.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Nomascus leucogenys]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|53501|emb|CAA36682.1| octamer-binding protein 4 [Mus musculus]
gi|226823|prf||1607337A germ line-specific protein Oct-4
Length = 324
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 126 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD-NNE 180
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + +++ A +KRKRTSI + SLE F P+PS ++I IA +L L+K+V
Sbjct: 181 NLQEICKSETLVQA--RKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDV 238
Query: 136 VR 137
VR
Sbjct: 239 VR 240
>gi|426341279|ref|XP_004035970.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Gorilla gorilla gorilla]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|403273110|ref|XP_003928366.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Saimiri boliviensis boliviensis]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|4505955|ref|NP_000297.1| pituitary-specific positive transcription factor 1 isoform alpha
[Homo sapiens]
gi|402858759|ref|XP_003893855.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Papio anubis]
gi|123408|sp|P28069.1|PIT1_HUMAN RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|35475|emb|CAA44295.1| transcription factor [Homo sapiens]
gi|219998|dbj|BAA01068.1| Pit-1/GHF-1 [Homo sapiens]
gi|119589272|gb|EAW68866.1| POU domain, class 1, transcription factor 1 (Pit1, growth hormone
factor 1), isoform CRA_a [Homo sapiens]
gi|157169656|gb|AAI52852.1| POU class 1 homeobox 1 [synthetic construct]
gi|306921579|dbj|BAJ17869.1| POU class 1 homeobox 1 [synthetic construct]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|293612315|gb|ADE48579.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L S NM L+P+LQ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQHSFKNMCKLRPLLQKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++ + IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRARGNLENLFLQCPKPTLQQTSHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|402858761|ref|XP_003893856.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Papio anubis]
gi|355559253|gb|EHH15981.1| hypothetical protein EGK_11197 [Macaca mulatta]
gi|355746334|gb|EHH50948.1| hypothetical protein EGM_10255 [Macaca fascicularis]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|410970231|ref|XP_003991591.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Felis catus]
Length = 317
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|332212152|ref|XP_003255184.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Nomascus leucogenys]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|2052272|emb|CAA73079.1| pit-1 [Sus scrofa]
Length = 285
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 141 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 197
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 198 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 249
Query: 134 NVVR 137
VVR
Sbjct: 250 EVVR 253
>gi|114588000|ref|XP_526244.2| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Pan troglodytes]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|297670608|ref|XP_002813455.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Pongo abelii]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|410970229|ref|XP_003991590.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Felis catus]
Length = 291
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|321173071|gb|ADW77319.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGAL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ A++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHTAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|301604325|ref|XP_002931807.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 3 [Xenopus (Silurana) tropicalis]
Length = 330
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 185 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 241
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE++F Q +PS ++I +AE L+L+K
Sbjct: 242 YNEK--------IGGNERKRKRRTTISIAAKEALESHFGEQSKPSSQEIMRMAEGLNLEK 293
Query: 134 NVVR 137
VVR
Sbjct: 294 EVVR 297
>gi|403273108|ref|XP_003928365.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 291
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|397523054|ref|XP_003831560.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Pan paniscus]
Length = 291
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|395537159|ref|XP_003770572.1| PREDICTED: POU domain, class 5, transcription factor 1 isoform 1
[Sarcophilus harrisii]
Length = 344
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 7/122 (5%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ WLE A+
Sbjct: 146 GYTQADVGITLGAL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWLEAADDN-D 200
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ + A +VL +KRKRTSI + +LE F P+P+ ++I+ IAE+L L+K+V
Sbjct: 201 HLQELCKAETVLQQA-RKRKRTSIENGVRGNLETMFLQCPKPTLQQISNIAEELGLEKDV 259
Query: 136 VR 137
VR
Sbjct: 260 VR 261
>gi|354501599|ref|XP_003512878.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Cricetulus griseus]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 77 KRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K V
Sbjct: 204 YSEK------VGANERKRKRRTTISIAAKDALERHFGQQSKPSSQEIMRMAEELNLEKEV 257
Query: 136 VR 137
VR
Sbjct: 258 VR 259
>gi|301604323|ref|XP_002931806.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 323
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 178 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 234
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE++F Q +PS ++I +AE L+L+K
Sbjct: 235 YNEK--------IGGNERKRKRRTTISIAAKEALESHFGEQSKPSSQEIMRMAEGLNLEK 286
Query: 134 NVVR 137
VVR
Sbjct: 287 EVVR 290
>gi|158288315|ref|XP_310195.4| AGAP009500-PA [Anopheles gambiae str. PEST]
gi|157019191|gb|EAA05862.4| AGAP009500-PA [Anopheles gambiae str. PEST]
Length = 400
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 11/129 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++ N
Sbjct: 240 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSISN 296
Query: 77 KRRDPDAPSVLP--------AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+P+ L G +++KRTSI + +LE F V +P+ E+I+ +A+
Sbjct: 297 PGGRIFSPAALSNTMATPETMGRRRKKRTSIETSVRVALEKAFLVNCKPTSEEISTLADN 356
Query: 129 LDLKKNVVR 137
L ++K VVR
Sbjct: 357 LCMEKEVVR 365
>gi|296491579|tpg|DAA33622.1| TPA: pituitary-specific positive transcription factor 1 [Bos
taurus]
gi|377655102|gb|AFB73754.1| pituitary specific transcription factor [Bubalus bubalis]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|301604327|ref|XP_002931808.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 4 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 151 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 207
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE++F Q +PS ++I +AE L+L+K
Sbjct: 208 YNEK--------IGGNERKRKRRTTISIAAKEALESHFGEQSKPSSQEIMRMAEGLNLEK 259
Query: 134 NVVR 137
VVR
Sbjct: 260 EVVR 263
>gi|47523414|ref|NP_999328.1| pituitary-specific positive transcription factor 1 [Sus scrofa]
gi|6638252|gb|AAB65789.2| POU-domain transcriptional regulator [Sus scrofa]
gi|300518903|gb|ADK25701.1| POU class 1 homeobox 1 [Sus scrofa]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|200118|gb|AAA39844.1| octamer binding transcription factor [Mus musculus]
Length = 377
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + +++ A +KRKRTSI + SLE F P+PS ++I IA +L L+K+V
Sbjct: 209 NLQEICKSETLVQA--RKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|27807047|ref|NP_777004.1| pituitary-specific positive transcription factor 1 [Bos taurus]
gi|123407|sp|P10036.1|PIT1_BOVIN RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|389|emb|CAA31184.1| unnamed protein product [Bos taurus]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|296231876|ref|XP_002761338.1| PREDICTED: pituitary-specific positive transcription factor 1
[Callithrix jacchus]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|44829051|emb|CAD70238.1| pituitary specific POU domain transcription factor 1 [Ovis aries]
gi|220682206|gb|ACL80213.1| Pit-1 [Capra hircus]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|88174219|gb|ABD39236.1| pituitary transcription factor 1 [Ovis aries]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|235988|gb|AAB19896.1| Oct3 [Mus sp.]
Length = 352
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + +++ A +KRKRTSI + SLE F P+PS ++I IA +L L+K+V
Sbjct: 209 NLQEICKSETLVQA--RKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|167540608|gb|ABZ81984.1| POU domain transcription factor 1 [Capra hircus]
Length = 291
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRKR T+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRKTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|88174213|gb|ABD39233.1| pituitary transcription factor 1 beta variant [Ovis aries]
Length = 317
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|91717341|gb|ABE57118.1| pituitary specific transcription factor 1 [Papio anubis]
Length = 227
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 98 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 154
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 155 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 206
Query: 134 NVVR 137
VVR
Sbjct: 207 EVVR 210
>gi|301604321|ref|XP_002931805.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 357
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 212 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 268
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE++F Q +PS ++I +AE L+L+K
Sbjct: 269 YNEK--------IGGNERKRKRRTTISIAAKEALESHFGEQSKPSSQEIMRMAEGLNLEK 320
Query: 134 NVVR 137
VVR
Sbjct: 321 EVVR 324
>gi|410959714|ref|XP_003986446.1| PREDICTED: POU domain, class 3, transcription factor 2-like,
partial [Felis catus]
Length = 151
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 5/101 (4%)
Query: 38 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKR 96
SQ+TICRFE+L LS NM LKP+L WLEEA++ + + P + + A G K++KR
Sbjct: 11 FSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSSGS----PTSIDKIAAQGRKRKKR 66
Query: 97 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
TSI K +LE++F P+PS ++I ++A+ L L+K VVR
Sbjct: 67 TSIEVSVKGALESHFLKCPKPSAQEITSLADSLQLEKEVVR 107
>gi|293612242|gb|ADE48549.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G QADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYAQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|327287340|ref|XP_003228387.1| PREDICTED: POU domain, class 5, transcription factor 1-like [Anolis
carolinensis]
Length = 427
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/123 (46%), Positives = 76/123 (61%), Gaps = 11/123 (8%)
Query: 17 GVTQADVGKALANL--KLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQA 74
G TQADVG +L L K+ SQ+TICRFE+L LS NM LKP+LQ WL+EA++
Sbjct: 226 GFTQADVGLSLGLLYGKM-----FSQTTICRFEALQLSFKNMSKLKPLLQRWLQEADSTT 280
Query: 75 KNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ A ++ A +KRKRTSI + +LEAYF +PS ++I IA +L L K+
Sbjct: 281 QQLCTMESA--MIQA--RKRKRTSIENTVRGALEAYFRRCSKPSLQQITQIASELGLDKD 336
Query: 135 VVR 137
VVR
Sbjct: 337 VVR 339
>gi|125490392|ref|NP_038661.2| POU domain, class 5, transcription factor 1 isoform 1 [Mus
musculus]
gi|123403|sp|P20263.1|PO5F1_MOUSE RecName: Full=POU domain, class 5, transcription factor 1; AltName:
Full=NF-A3; AltName: Full=Octamer-binding protein 3;
Short=Oct-3; AltName: Full=Octamer-binding protein 4;
Short=Oct-4; AltName: Full=Octamer-binding transcription
factor 3; Short=OTF-3
gi|46189245|gb|AAH68268.1| POU domain, class 5, transcription factor 1 [Mus musculus]
gi|148691268|gb|EDL23215.1| POU domain, class 5, transcription factor 1 [Mus musculus]
gi|226923|prf||1611402A transcription factor
Length = 352
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + +++ A +KRKRTSI + SLE F P+PS ++I IA +L L+K+V
Sbjct: 209 NLQEICKSETLVQA--RKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|13432199|sp|Q04788.3|PIT1_PIG RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
Length = 291
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|440906197|gb|ELR56490.1| Pituitary-specific positive transcription factor 1 [Bos grunniens
mutus]
Length = 348
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 204 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 260
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 261 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 312
Query: 134 NVVR 137
VVR
Sbjct: 313 EVVR 316
>gi|327268793|ref|XP_003219180.1| PREDICTED: pituitary-specific positive transcription factor 1-like
[Anolis carolinensis]
Length = 335
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 10/131 (7%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL
Sbjct: 181 DFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILTKWL 237
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
EEAE + E+KRK RT+I+ K +LE++F Q +PS ++I +A
Sbjct: 238 EEAEQVGALYSEK------VGVNERKRKRRTTISIAAKEALESHFTEQSKPSSQEIMRMA 291
Query: 127 EKLDLKKNVVR 137
E L+L+K VVR
Sbjct: 292 EGLNLEKEVVR 302
>gi|45383514|ref|NP_989650.1| pituitary-specific positive transcription factor 1 [Gallus gallus]
gi|4103930|gb|AAD01888.1| transcription factor Pit-1/GHF-1 [Gallus gallus]
gi|4456146|emb|CAA10947.2| pituitary specific transcription factor [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|6226827|sp|Q9YGL7.1|PIT1_CHICK RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|4456142|emb|CAB37357.1| pituitary specific transcription factor [Gallus gallus]
Length = 363
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 218 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 274
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 275 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 326
Query: 134 NVVR 137
VVR
Sbjct: 327 EVVR 330
>gi|195435093|ref|XP_002065536.1| GK15505 [Drosophila willistoni]
gi|194161621|gb|EDW76522.1| GK15505 [Drosophila willistoni]
Length = 614
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+
Sbjct: 451 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDAD 507
Query: 72 --AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
QA DP A P ++ G +++KRTSI + +LE F +P+ E+I
Sbjct: 508 RTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQKPTSEEI 565
Query: 123 AAIAEKLDLKKNVVR 137
+ +A++L ++K VVR
Sbjct: 566 SQLADRLGMEKEVVR 580
>gi|198474117|ref|XP_001356560.2| GA19468 [Drosophila pseudoobscura pseudoobscura]
gi|198138256|gb|EAL33624.2| GA19468 [Drosophila pseudoobscura pseudoobscura]
Length = 620
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 462 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 518
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I+ +A+
Sbjct: 519 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQKPTSEEISQLAD 576
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 577 RLGMEKEVVR 586
>gi|374087697|gb|AEY82647.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|170672693|gb|ACB30023.1| POU class 5 homeobox 1 [Felis catus]
Length = 328
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 129 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 183
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 184 SLQEICKAETLVQA--RKRKRTSIENRVRGNLENMFLQCPKPTLQQISHIAQQLGLEKDV 241
Query: 136 VR 137
VR
Sbjct: 242 VR 243
>gi|4456140|emb|CAB37356.1| pituitary specific transcription factor [Gallus gallus]
Length = 335
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 190 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 246
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 247 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 298
Query: 134 NVVR 137
VVR
Sbjct: 299 EVVR 302
>gi|374087715|gb|AEY82656.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087719|gb|AEY82658.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|374087711|gb|AEY82654.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087747|gb|AEY82672.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|395728701|ref|XP_003780461.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 5, transcription
factor 1 [Pongo abelii]
Length = 295
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 76/120 (63%), Gaps = 8/120 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 129 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 183
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 184 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 241
>gi|327343217|dbj|BAK09361.1| pituitary-specific positive transcription factor 1 variant w [Mus
musculus]
Length = 289
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 145 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 201
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 202 YNEK--------VGANERKRKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 253
Query: 134 NVVR 137
VVR
Sbjct: 254 EVVR 257
>gi|6679335|ref|NP_032875.1| pituitary-specific positive transcription factor 1 [Mus musculus]
gi|123409|sp|Q00286.1|PIT1_MOUSE RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|53691|emb|CAA40737.1| pit-1 [Mus musculus]
gi|493686|dbj|BAA02289.1| pit-1/GHF-1 [Mus musculus]
gi|38174668|gb|AAH61213.1| Pou1f1 protein [Mus musculus]
gi|148665828|gb|EDK98244.1| pituitary specific transcription factor 1 [Mus musculus]
gi|227214|prf||1616365A pit-1 gene
Length = 291
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISVAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|337298614|ref|NP_001229656.1| POU domain, class 5, transcription factor 1 [Ornithorhynchus
anatinus]
gi|156602045|gb|ABU86919.1| Pou5f1 [Ornithorhynchus anatinus]
Length = 358
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 7/122 (5%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+ LS NM L+P+LQ WLE A+ +
Sbjct: 160 GYTQADVGVTLGAL----FGKVFSQTTICRFEAQQLSFKNMCKLRPLLQRWLEAADDNDR 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ +A +VL +KRKRTSI + +LE F P+P+ ++I++IAE+L L+K+V
Sbjct: 216 LQEMC-NAETVLQQA-RKRKRTSIENKVRGNLETMFLQCPKPNLQQISSIAEELGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|374087727|gb|AEY82662.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087731|gb|AEY82664.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|326913145|ref|XP_003202901.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Meleagris gallopavo]
Length = 363
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 218 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 274
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 275 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 326
Query: 134 NVVR 137
VVR
Sbjct: 327 EVVR 330
>gi|55741453|ref|NP_001006950.1| pituitary-specific positive transcription factor 1 [Canis lupus
familiaris]
gi|13431779|sp|Q9TTI7.1|PIT1_CANFA RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|6649946|gb|AAF21643.1|AF035585_1 transcription factor Pit-1 [Canis lupus familiaris]
Length = 291
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|374087709|gb|AEY82653.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|374087701|gb|AEY82649.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087735|gb|AEY82666.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|195035747|ref|XP_001989333.1| GH10114 [Drosophila grimshawi]
gi|193905333|gb|EDW04200.1| GH10114 [Drosophila grimshawi]
Length = 620
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 78/135 (57%), Gaps = 14/135 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+
Sbjct: 458 RRIKLGFTQGDVGSAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDAD 514
Query: 72 --AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
QA DP A P ++ G +++KRTSI + +LE F +P+ E+I
Sbjct: 515 RTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQKPTSEEI 572
Query: 123 AAIAEKLDLKKNVVR 137
+A++L ++K VVR
Sbjct: 573 TQLADRLGMEKEVVR 587
>gi|374087739|gb|AEY82668.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|224083296|ref|XP_002191006.1| PREDICTED: POU domain, class 2, transcription factor 3-like
[Taeniopygia guttata]
Length = 230
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 76/123 (61%), Gaps = 6/123 (4%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAKN 76
V + DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE A +
Sbjct: 2 VLKGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAESAPLDS 58
Query: 77 KRRDPDA-PSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
P++ PSV G K++KRTSI + +LE F P+PS E+I+ IAE+L ++K
Sbjct: 59 SMSTPNSYPSVNEMFGRKRKKRTSIETNIRSTLEKRFQDNPKPSSEEISLIAEQLSMEKE 118
Query: 135 VVR 137
VVR
Sbjct: 119 VVR 121
>gi|195114774|ref|XP_002001942.1| GI14486 [Drosophila mojavensis]
gi|193912517|gb|EDW11384.1| GI14486 [Drosophila mojavensis]
Length = 589
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+
Sbjct: 427 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDAD 483
Query: 72 --AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
QA DP A P ++ G +++KRTSI + +LE F +P+ E+I
Sbjct: 484 RTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQKPTSEEI 541
Query: 123 AAIAEKLDLKKNVVR 137
+ +A++L ++K VVR
Sbjct: 542 SQLADRLGMEKEVVR 556
>gi|374087705|gb|AEY82651.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087733|gb|AEY82665.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|326913147|ref|XP_003202902.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Meleagris gallopavo]
Length = 335
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 190 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 246
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 247 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 298
Query: 134 NVVR 137
VVR
Sbjct: 299 EVVR 302
>gi|245324|gb|AAB21409.1| POU domain gene [Drosophila melanogaster]
Length = 601
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 444 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 500
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I +A+
Sbjct: 501 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLAD 558
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 559 RLSMEKEVVR 568
>gi|161076884|ref|NP_001097153.1| nubbin, isoform B [Drosophila melanogaster]
gi|157400152|gb|ABV53675.1| nubbin, isoform B [Drosophila melanogaster]
Length = 961
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 804 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 860
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I +A+
Sbjct: 861 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLAD 918
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 919 RLSMEKEVVR 928
>gi|195351089|ref|XP_002042069.1| GM26870 [Drosophila sechellia]
gi|194123893|gb|EDW45936.1| GM26870 [Drosophila sechellia]
Length = 601
Score = 85.9 bits (211), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 444 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 500
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I +A+
Sbjct: 501 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLAD 558
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 559 RLSMEKEVVR 568
>gi|17136366|ref|NP_476659.1| nubbin, isoform D [Drosophila melanogaster]
gi|400745|sp|P31368.1|PDM1_DROME RecName: Full=Protein nubbin; AltName: Full=POU domain protein 1;
Short=PDM-1; AltName: Full=Protein twain; AltName:
Full=dOCT1; AltName: Full=dPOU-19
gi|157288|gb|AAA28480.1| dPOU-19 [Drosophila melanogaster]
gi|158150|gb|AAA28829.1| POU domain protein [Drosophila melanogaster]
gi|21392124|gb|AAM48416.1| RE34782p [Drosophila melanogaster]
gi|22946343|gb|AAF53205.2| nubbin, isoform D [Drosophila melanogaster]
gi|220942510|gb|ACL83798.1| nub-PD [synthetic construct]
Length = 601
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 444 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 500
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I +A+
Sbjct: 501 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLAD 558
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 559 RLSMEKEVVR 568
>gi|395821288|ref|XP_003783977.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 2 [Otolemur garnettii]
Length = 317
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLDEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIVRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|194761346|ref|XP_001962890.1| GF14200 [Drosophila ananassae]
gi|190616587|gb|EDV32111.1| GF14200 [Drosophila ananassae]
Length = 622
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 77/130 (59%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 465 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 521
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I+ +A+
Sbjct: 522 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQKPTSEEISQLAD 579
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 580 RLGMEKEVVR 589
>gi|195147630|ref|XP_002014782.1| GL19353 [Drosophila persimilis]
gi|194106735|gb|EDW28778.1| GL19353 [Drosophila persimilis]
Length = 619
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+
Sbjct: 456 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDAD 512
Query: 72 --AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
QA DP A P ++ G +++KRTSI + +LE F +P+ E+I
Sbjct: 513 RTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQKPTSEEI 570
Query: 123 AAIAEKLDLKKNVVR 137
+ +A++L ++K VVR
Sbjct: 571 SQLADRLGMEKEVVR 585
>gi|206145|gb|AAA41852.1| PIT-1-beta [Rattus norvegicus]
gi|4490974|emb|CAA46440.1| GHF-2 [Rattus norvegicus]
gi|149016744|gb|EDL75906.1| POU domain, class 1, transcription factor 1, isoform CRA_a [Rattus
norvegicus]
Length = 317
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|206146|gb|AAA41853.1| PIT-1-beta [Rattus norvegicus]
Length = 291
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|195578779|ref|XP_002079241.1| GD23844 [Drosophila simulans]
gi|194191250|gb|EDX04826.1| GD23844 [Drosophila simulans]
Length = 601
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 444 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 500
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I +A+
Sbjct: 501 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLAD 558
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 559 RLSMEKEVVR 568
>gi|218963103|gb|ACJ13294.2| pituitary-specific transcription factor 1 [Anser anser]
Length = 336
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 191 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 247
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 248 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 299
Query: 134 NVVR 137
VVR
Sbjct: 300 EVVR 303
>gi|195401230|ref|XP_002059217.1| GJ16273 [Drosophila virilis]
gi|194156091|gb|EDW71275.1| GJ16273 [Drosophila virilis]
Length = 597
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 79/135 (58%), Gaps = 14/135 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+
Sbjct: 435 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDAD 491
Query: 72 --AQAKNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
QA DP A P ++ G +++KRTSI + +LE F +P+ E+I
Sbjct: 492 RTIQATGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFMANQKPTSEEI 549
Query: 123 AAIAEKLDLKKNVVR 137
+ +A++L ++K VVR
Sbjct: 550 SQLADRLGMEKEVVR 564
>gi|116874846|dbj|BAF36053.1| pituitary specific transcription factor 1 [Anas platyrhynchos]
gi|116874848|dbj|BAF36054.1| pituitary specific transcription factor 1 [Anas platyrhynchos]
Length = 335
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 190 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 246
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 247 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 298
Query: 134 NVVR 137
VVR
Sbjct: 299 EVVR 302
>gi|395821286|ref|XP_003783976.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Otolemur garnettii]
Length = 291
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLDEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEIVRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|224044259|ref|XP_002194871.1| PREDICTED: pituitary-specific positive transcription factor 1
isoform 1 [Taeniopygia guttata]
Length = 335
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 73/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 190 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 246
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 247 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 298
Query: 134 NVVR 137
VVR
Sbjct: 299 EVVR 302
>gi|194861123|ref|XP_001969720.1| GG23791 [Drosophila erecta]
gi|190661587|gb|EDV58779.1| GG23791 [Drosophila erecta]
Length = 604
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 447 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 503
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I +A+
Sbjct: 504 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLAD 561
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 562 RLGMEKEVVR 571
>gi|57164355|ref|NP_001009350.1| pituitary-specific positive transcription factor 1 [Ovis aries]
gi|3023968|sp|P79364.1|PIT1_SHEEP RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|1857778|gb|AAB48500.1| Pit-1 [Ovis aries]
Length = 291
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILFKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|195472405|ref|XP_002088491.1| GE18594 [Drosophila yakuba]
gi|194174592|gb|EDW88203.1| GE18594 [Drosophila yakuba]
Length = 603
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 76/130 (58%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ QA
Sbjct: 446 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLDDADRTIQA 502
Query: 75 KNKRRDPDA-------PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
DP A P ++ G +++KRTSI + +LE F +P+ E+I +A+
Sbjct: 503 TGGVFDPAALQATVSTPEII--GRRRKKRTSIETTIRGALEKAFLANQKPTSEEITQLAD 560
Query: 128 KLDLKKNVVR 137
+L ++K VVR
Sbjct: 561 RLGMEKEVVR 570
>gi|253722058|pdb|1AU7|A Chain A, Pit-1 MutantDNA COMPLEX
gi|253722059|pdb|1AU7|B Chain B, Pit-1 MutantDNA COMPLEX
Length = 146
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 72/122 (59%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + G SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 20 GYTQTNVGEALA--AVHG-SEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVG-- 74
Query: 77 KRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K V
Sbjct: 75 ----ALYNEKVGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEKEV 130
Query: 136 VR 137
VR
Sbjct: 131 VR 132
>gi|198427417|ref|XP_002130112.1| PREDICTED: transcription factor protein [Ciona intestinalis]
Length = 519
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 75/140 (53%), Gaps = 16/140 (11%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D + + G TQ DVG+A+ L SQ+TI RFE+L LS NMI LKP+L+ WL
Sbjct: 154 DFKQKRIKMGFTQGDVGQAMGCLY---GNDFSQTTISRFEALNLSFKNMIKLKPMLERWL 210
Query: 68 EEAEAQAKNKRRDPDAPSV----------LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRP 117
+A R D SV + K++KRTSI A ++ +L+ F P+P
Sbjct: 211 LDANNVL---RESKDGQSVVIPTPIQLDPISISRKRKKRTSIDAKKRTTLDKQFERNPKP 267
Query: 118 SGEKIAAIAEKLDLKKNVVR 137
S E + AIAE+ ++K VVR
Sbjct: 268 SSEDLQAIAEECKMEKEVVR 287
>gi|38181828|gb|AAH61564.1| Pou1f1 protein [Rattus norvegicus]
Length = 336
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 192 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 248
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 249 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 300
Query: 134 NVVR 137
VVR
Sbjct: 301 EVVR 304
>gi|338720782|ref|XP_003364248.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Equus caballus]
Length = 317
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGVNERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|444717885|gb|ELW58705.1| Pituitary-specific positive transcription factor 1 [Tupaia
chinensis]
Length = 249
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 75/124 (60%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 105 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 161
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS +++ +AE+L+L+K
Sbjct: 162 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEQNKPSSQELMRMAEELNLEK 213
Query: 134 NVVR 137
VVR
Sbjct: 214 EVVR 217
>gi|327343219|dbj|BAK09362.1| pituitary-specific positive transcription factor 1 variant w
[Rattus norvegicus]
Length = 284
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 140 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 196
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 197 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 248
Query: 134 NVVR 137
VVR
Sbjct: 249 EVVR 252
>gi|13432198|sp|P10037.3|PIT1_RAT RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|56219|emb|CAA31185.1| unnamed protein product [Rattus norvegicus]
gi|206142|gb|AAA41850.1| PIT-1-alpha [Rattus norvegicus]
gi|511883|gb|AAA41854.1| transcription factor [Rattus norvegicus]
gi|149016745|gb|EDL75907.1| POU domain, class 1, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
gi|149016746|gb|EDL75908.1| POU domain, class 1, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
gi|149016747|gb|EDL75909.1| POU domain, class 1, transcription factor 1, isoform CRA_b [Rattus
norvegicus]
Length = 291
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|206143|gb|AAA41851.1| PIT-1-alpha [Rattus norvegicus]
Length = 265
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 121 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 177
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 178 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 229
Query: 134 NVVR 137
VVR
Sbjct: 230 EVVR 233
>gi|40254792|ref|NP_037140.2| pituitary-specific positive transcription factor 1 [Rattus
norvegicus]
gi|38181558|gb|AAH61563.1| POU class 1 homeobox 1 [Rattus norvegicus]
Length = 291
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKDALERHFGEHSKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|313220566|emb|CBY31415.1| unnamed protein product [Oikopleura dioica]
Length = 461
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ DVG A+ L G+ SQ+TI RFE+L LS NM LKPIL+ WLE+AE
Sbjct: 228 GFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLSFKNMCKLKPILERWLEDAERYLT 283
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
++ + L + +++KRTSI K +LE +F RP+ +I ++E L++++
Sbjct: 284 PNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFLRNSRPTSAEITQLSEDLEMERET 343
Query: 136 VR 137
VR
Sbjct: 344 VR 345
>gi|321469118|gb|EFX80100.1| hypothetical protein DAPPUDRAFT_7063 [Daphnia pulex]
Length = 161
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/126 (41%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 24 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSALGG 80
Query: 77 KRRDPDAPSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + G +++KRTSI + +LE F P+P+ E+IA +A+ L +
Sbjct: 81 GGNGSGAGGCGSSVSDGLGRRRKKRTSIETSVRVALEKAFLANPKPTSEEIAMLADGLSM 140
Query: 132 KKNVVR 137
+K VVR
Sbjct: 141 EKEVVR 146
>gi|301772656|ref|XP_002921747.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Ailuropoda melanoleuca]
Length = 291
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGVNERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|149742238|ref|XP_001501308.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Equus caballus]
Length = 291
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 204 YNEK--------VGVNERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|449283865|gb|EMC90459.1| Pituitary-specific positive transcription factor 1 [Columba livia]
Length = 363
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 218 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 274
Query: 77 KRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K V
Sbjct: 275 YSEK------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEV 328
Query: 136 VR 137
VR
Sbjct: 329 VR 330
>gi|84374236|gb|ABC58218.1| transcription factor OctA2 [Oikopleura dioica]
Length = 461
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ DVG A+ L G+ SQ+TI RFE+L LS NM LKPIL+ WLE+AE
Sbjct: 228 GFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLSFKNMCKLKPILERWLEDAERYLT 283
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
++ + L + +++KRTSI K +LE +F RP+ +I ++E L++++
Sbjct: 284 PNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFLRNSRPTSAEITQLSEDLEMERET 343
Query: 136 VR 137
VR
Sbjct: 344 VR 345
>gi|162287318|ref|NP_001087461.1| MGC86493 protein [Xenopus laevis]
gi|50925090|gb|AAH79821.1| MGC86493 protein [Xenopus laevis]
Length = 457
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP L+ WL
Sbjct: 244 DLKHKRVSMGYTQADVGYALGVLYGK---MFSQTTICRFESLQLSFKNMCQLKPFLERWL 300
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
EAE N++ + V+ K+++RT+I K +LE+YF +P +++ IA+
Sbjct: 301 VEAE-NNDNRQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCSKPGAQEMVQIAK 359
Query: 128 KLDLKKNVVR 137
+L++ K+VVR
Sbjct: 360 ELNMDKDVVR 369
>gi|281339735|gb|EFB15319.1| hypothetical protein PANDA_012884 [Ailuropoda melanoleuca]
Length = 266
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 76/119 (63%), Gaps = 6/119 (5%)
Query: 19 TQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKR 78
TQADVG L L SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N +
Sbjct: 69 TQADVGLTLGVLS---GKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQ 124
Query: 79 RDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++ L+K+VVR
Sbjct: 125 EISKAETLVQA--QKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQQGLEKDVVR 181
>gi|301772654|ref|XP_002921746.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Ailuropoda melanoleuca]
gi|281339010|gb|EFB14594.1| hypothetical protein PANDA_010657 [Ailuropoda melanoleuca]
Length = 317
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGVNERKRKRRTTISIAAKDALERHFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|313225173|emb|CBY20967.1| unnamed protein product [Oikopleura dioica]
Length = 280
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ DVG A+ L G+ SQ+TI RFE+L LS NM LKPIL+ WLE+AE
Sbjct: 47 GFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLSFKNMCKLKPILERWLEDAERYLT 102
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
++ + L + +++KRTSI K +LE +F RP+ +I ++E L++++
Sbjct: 103 PNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFLRNSRPTSAEITHLSEDLEMERET 162
Query: 136 VR 137
VR
Sbjct: 163 VR 164
>gi|345322672|ref|XP_003430620.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 5 [Ornithorhynchus anatinus]
Length = 316
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 171 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 227
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +A+ L+L+K
Sbjct: 228 YNEK--------VGANERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMADGLNLEK 279
Query: 134 NVVR 137
VVR
Sbjct: 280 EVVR 283
>gi|345322670|ref|XP_001515178.2| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 1 [Ornithorhynchus anatinus]
Length = 354
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 209 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 265
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +A+ L+L+K
Sbjct: 266 YNEK--------VGANERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMADGLNLEK 317
Query: 134 NVVR 137
VVR
Sbjct: 318 EVVR 321
>gi|218963105|gb|ACJ13295.2| pituitary-specific transcription factor 1 [Anser anser]
Length = 336
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 191 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLEEAEQVGAL 247
Query: 77 KRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ E+KRK RT+I+ K +LE +F Q +PS ++I +AE L+L+K V
Sbjct: 248 YSEK------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEKEV 301
Query: 136 VR 137
VR
Sbjct: 302 VR 303
>gi|84374234|gb|ABC58217.1| transcription factor OctA1 [Oikopleura dioica]
Length = 461
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ DVG A+ L G+ SQ+TI RFE+L LS NM LKPIL+ WLE+AE
Sbjct: 228 GFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLSFKNMCKLKPILERWLEDAERYLT 283
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
++ + L + +++KRTSI K +LE +F RP+ +I ++E L++++
Sbjct: 284 PNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFLRNSRPTSAEITQLSEDLEMERET 343
Query: 136 VR 137
VR
Sbjct: 344 VR 345
>gi|345322664|ref|XP_003430617.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 328
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 183 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 239
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +A+ L+L+K
Sbjct: 240 YNEK--------VGANERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMADGLNLEK 291
Query: 134 NVVR 137
VVR
Sbjct: 292 EVVR 295
>gi|443686909|gb|ELT90027.1| hypothetical protein CAPTEDRAFT_206399 [Capitella teleta]
Length = 158
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 69/114 (60%), Gaps = 10/114 (8%)
Query: 24 GKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDA 83
G +LA K+ G SQ+TICRFE+L LS+ N L+PIL+ WL +AEA + D
Sbjct: 16 GNSLA--KVHG-SVFSQTTICRFENLQLSYKNACKLRPILEQWLHDAEAACVD-----DK 67
Query: 84 PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
+ ++++RT+I+A K +LEA+F QP+PS IA +A L L K VVR
Sbjct: 68 SGTMD--RRRKRRTTISALAKDALEAHFTRQPKPSSYDIARVASSLRLDKEVVR 119
>gi|315113390|pdb|3L1P|A Chain A, Pou Protein:dna Complex
gi|315113391|pdb|3L1P|B Chain B, Pou Protein:dna Complex
Length = 155
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TI RFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 27 GYTQADVGLTLGVL----FGKVFSQTTISRFEALQLSLKNMSKLRPLLEKWVEEAD-NNE 81
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + +++ A +KRKRTSI + SLE F P+PS ++I IA +L L+K+V
Sbjct: 82 NLQEISKSETLVQA--RKRKRTSIENRVRWSLETMFLKSPKPSLQQITHIANQLGLEKDV 139
Query: 136 VR 137
VR
Sbjct: 140 VR 141
>gi|293612369|gb|ADE48602.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173329|gb|ADW77436.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
gi|321173345|gb|ADW77443.1| POU domain transcription factor OCT4-pg4 [Homo sapiens]
Length = 286
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE L LS NM L+P+LQ +EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEGLQLSFKNMCKLRPLLQKRVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A ++L A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 209 NLQETCKAETLLQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|351713884|gb|EHB16803.1| Pituitary-specific positive transcription factor 1 [Heterocephalus
glaber]
Length = 317
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 173 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAEQVGAL 229
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE F Q +PS ++I +AE+L+L+K
Sbjct: 230 YNEK--------VGANERKRKRRTTISIAAKDALERNFGEQNKPSSQEIMRMAEELNLEK 281
Query: 134 NVVR 137
VVR
Sbjct: 282 EVVR 285
>gi|85699824|gb|ABC74438.1| POU2 transcription factor [Oikopleura dioica]
Length = 461
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 5/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ DVG A+ L G+ SQ+TI RFE+L LS NM LKPIL+ WLE+AE
Sbjct: 228 GFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLSFKNMCKLKPILERWLEDAERYLT 283
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
++ + L + +++KRTSI K +LE +F RP+ +I ++E L++++
Sbjct: 284 PNQQSLSTEAQLESARRRKKRTSIDNSVKVALEMHFLRNSRPTSAEITHLSEDLEMERET 343
Query: 136 VR 137
VR
Sbjct: 344 VR 345
>gi|214917|gb|AAA49996.1| XOCT-25 [Xenopus laevis]
Length = 448
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP L+ W+
Sbjct: 241 DLKHKRVSLGYTQADVGYALGVLYGK---MFSQTTICRFESLQLSFKNMCQLKPFLERWV 297
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
EAE N + + V+ K+++RT+I K +LE+YF P+P +++ IA+
Sbjct: 298 VEAE-NNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCPKPGAQEMVQIAK 356
Query: 128 KLDLKKNVVR 137
+L++ K+VVR
Sbjct: 357 ELNMDKDVVR 366
>gi|345322668|ref|XP_003430619.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 4 [Ornithorhynchus anatinus]
Length = 329
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 184 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 240
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +A+ L+L+K
Sbjct: 241 YNEK--------VGANERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMADGLNLEK 292
Query: 134 NVVR 137
VVR
Sbjct: 293 EVVR 296
>gi|156377792|ref|XP_001630830.1| predicted protein [Nematostella vectensis]
gi|156217858|gb|EDO38767.1| predicted protein [Nematostella vectensis]
Length = 163
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG ALA + G SQ+TICRFE+L LS N LKPIL WLEEAE
Sbjct: 24 GFTQTNVGAALA--AVHGTD-FSQTTICRFENLQLSFKNACKLKPILARWLEEAE----- 75
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
R A ++++RT+I K +LE +F Q +PS +I IA+ L L K VV
Sbjct: 76 -RSGGACGEKFGAERRRKRRTTIGLAAKEALENHFMKQTKPSSPEIVRIADGLRLDKEVV 134
Query: 137 R 137
R
Sbjct: 135 R 135
>gi|345322666|ref|XP_003430618.1| PREDICTED: pituitary-specific positive transcription factor 1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 292
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 74/124 (59%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL+EAE
Sbjct: 147 GYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILSKWLDEAEQVGAL 203
Query: 75 KNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + A E+KRK RT+I+ K +LE +F Q +PS ++I +A+ L+L+K
Sbjct: 204 YNEK--------VGANERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMADGLNLEK 255
Query: 134 NVVR 137
VVR
Sbjct: 256 EVVR 259
>gi|164619|gb|AAA31108.1| POU domain protein, partial [Sus scrofa]
Length = 129
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 10/121 (8%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ +VG+ALA + G SQ+TICRFE+L LS N LK IL WLEEAE
Sbjct: 9 GYTQTNVGEALA--AVHG-SEFSQTTICRFENLQLSFKNACKLKAILSKWLEEAE----- 60
Query: 77 KRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ + A E+KRK RT+I+ K +LE +F Q +PS ++I +AE+L+L+K V
Sbjct: 61 -QVGALYNEKVGANERKRKRRTTISIAAKDALERHFGEQNKPSSQEILRMAEELNLEKEV 119
Query: 136 V 136
V
Sbjct: 120 V 120
>gi|147901498|ref|NP_001079832.1| POU class V protein oct-25 [Xenopus laevis]
gi|82188107|sp|Q7T103.1|P5F11_XENLA RecName: Full=POU domain, class 5, transcription factor 1.1;
AltName: Full=POU class V protein oct-25; Short=XOct-25
gi|33417061|gb|AAH55964.1| Xoct-25 protein [Xenopus laevis]
gi|47021221|emb|CAG27841.1| POU factor [Xenopus laevis]
Length = 449
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP L+ W+
Sbjct: 241 DLKHKRVSLGYTQADVGYALGVLYGK---MFSQTTICRFESLQLSFKNMCQLKPFLERWV 297
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
EAE N + + V+ K+++RT+I K +LE+YF P+P +++ IA+
Sbjct: 298 VEAE-NNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCPKPGAQEMVQIAK 356
Query: 128 KLDLKKNVVR 137
+L++ K+VVR
Sbjct: 357 ELNMDKDVVR 366
>gi|111146889|gb|ABH07383.1| POU class V protein Oct-25 [Xenopus laevis]
Length = 449
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP L+ W+
Sbjct: 241 DLKHKRVSLGYTQADVGYALGVLYGK---MFSQTTICRFESLQLSFKNMCQLKPFLERWV 297
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
EAE N + + V+ K+++RT+I K +LE+YF P+P +++ IA+
Sbjct: 298 VEAE-NNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCPKPGAQEMVQIAK 356
Query: 128 KLDLKKNVVR 137
+L++ K+VVR
Sbjct: 357 ELNMDKDVVR 366
>gi|57164005|ref|NP_001009178.1| POU class 5 homeobox 1 [Rattus norvegicus]
gi|46237644|emb|CAE84020.1| POU domain, class 5, transcription factor 1 [Rattus norvegicus]
gi|149031836|gb|EDL86771.1| rCG41815 [Rattus norvegicus]
gi|165970638|gb|AAI58567.1| POU class 5 homeobox 1 [Rattus norvegicus]
Length = 352
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+ +
Sbjct: 154 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD-NNE 208
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + +++ A +KRKRTSI + +LE F P+PS ++I +IA++L L+++V
Sbjct: 209 NLQEICKSETLVQA--RKRKRTSIENRVRWNLENMFLQCPKPSLQQITSIAKQLGLERDV 266
Query: 136 VR 137
VR
Sbjct: 267 VR 268
>gi|269959229|gb|ACZ54717.1| POU domain class 5 transcription factor 1 [Macropus eugenii]
Length = 345
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 7/122 (5%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+ LS NM L+P+LQ WLE A+
Sbjct: 146 GYTQADVGITLGAL----FGKVFSQTTICRFEAQQLSFKNMCKLRPLLQKWLEAADDN-D 200
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
+ + A +VL +KRKRTSI + +LE F P+P+ ++I+ IAE+L L+K+V
Sbjct: 201 HLQELCKAETVLQQA-RKRKRTSIENGVRGNLETMFLQCPKPTLQQISNIAEELGLEKDV 259
Query: 136 VR 137
VR
Sbjct: 260 VR 261
>gi|321173456|gb|ADW77495.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 9/129 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VRPINGHTR 144
VR G+ R
Sbjct: 273 VRVCFGNRR 281
>gi|301613928|ref|XP_002936445.1| PREDICTED: hypothetical protein LOC100497329 [Xenopus (Silurana)
tropicalis]
Length = 623
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 10/128 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+LQ WL +AE + +
Sbjct: 273 GFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLQKWLSDAETMSVD 329
Query: 77 KRRDPDAPSVLPA-------GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
P P G +++KRTSI + +LE F +P+ E+I IAE+L
Sbjct: 330 STLPSPNPLSSPGGGYEGLPGRRRKKRTSIETNVRYALEKSFIANQKPTSEEILVIAEQL 389
Query: 130 DLKKNVVR 137
++K V+R
Sbjct: 390 KMEKEVIR 397
>gi|108744042|gb|ABG02394.1| POU domain class 5 transcription factor 1 [Bubalus bubalis]
Length = 104
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 69/101 (68%), Gaps = 3/101 (2%)
Query: 37 ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKR 96
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKR
Sbjct: 6 VFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLVQA--RKRKR 62
Query: 97 TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
TSI + +LE+ F P+P+ ++I+ IA++L L+K+VVR
Sbjct: 63 TSIENQVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDVVR 103
>gi|449280768|gb|EMC87994.1| POU domain, class 3, transcription factor 3, partial [Columba
livia]
Length = 113
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
Query: 39 SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPA-GEKKRKRT 97
SQ+TICRFE+L LS NM LKP+L WLEEA++ + P + + A G K++KRT
Sbjct: 1 SQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS----PTSIDKIAAQGRKRKKRT 56
Query: 98 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
SI K +LE++F P+PS ++I +A+ L L+K VVR
Sbjct: 57 SIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEVVR 96
>gi|293612324|gb|ADE48583.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG+ L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGRILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|149415547|ref|XP_001520175.1| PREDICTED: POU domain, class 5, transcription factor 1-like
[Ornithorhynchus anatinus]
Length = 337
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G+TQA+VG AL L SQ+TICRFE+L LS NM LKPIL WL +AE+ A +
Sbjct: 142 GLTQAEVGMALGTLY---GRVFSQTTICRFEALQLSFKNMCKLKPILHRWLNKAES-ADH 197
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKN 134
+ VL K+++RTSI + K SLE+ F +PS ++I IA+ L L K+
Sbjct: 198 PQETYIGERVLVPARKRKRRTSIQSSIKVSLESLFCRCGKPSPQQICDIAQDLQLDKD 255
>gi|405952348|gb|EKC20170.1| POU domain, class 2, transcription factor 1 [Crassostrea gigas]
Length = 507
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 21/134 (15%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WL++A+ N
Sbjct: 250 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLKDADTMCAN 306
Query: 77 KRR-------------DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
P++ +++KRTSI + +LE F P+PS E+I
Sbjct: 307 LNTPVGGSPGGNGNSLSPES-----VARRRKKRTSIETNIRVALEKSFQQNPKPSSEEIT 361
Query: 124 AIAEKLDLKKNVVR 137
++A++L ++K VVR
Sbjct: 362 SVADQLSMEKEVVR 375
>gi|260831460|ref|XP_002610677.1| hypothetical protein BRAFLDRAFT_117908 [Branchiostoma floridae]
gi|229296044|gb|EEN66687.1| hypothetical protein BRAFLDRAFT_117908 [Branchiostoma floridae]
Length = 755
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 12/131 (9%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL++A+
Sbjct: 391 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLQDAD 447
Query: 72 AQAKNKRRDPDA-----PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
+ N P A S+ G +++KRTSI + +LE F P+P+ E+I IA
Sbjct: 448 SSMAN----PGALGSPHGSIEVLGRRRKKRTSIETNVRVALEKAFIQNPKPTSEEIGIIA 503
Query: 127 EKLDLKKNVVR 137
E+L ++K VVR
Sbjct: 504 EQLGMEKEVVR 514
>gi|14719761|pdb|1E3O|C Chain C, Crystal Structure Of Oct-1 Pou Dimer Bound To More
Length = 160
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ--- 73
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AEA
Sbjct: 24 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAEANLSS 80
Query: 74 --AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + ++P + +++KRTSI + +LE F +P+ E I IAE+L++
Sbjct: 81 DSSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLNM 140
Query: 132 KKNVVR 137
+K V+R
Sbjct: 141 EKEVIR 146
>gi|357618068|gb|EHJ71163.1| nubbin [Danaus plexippus]
Length = 458
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 246 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDAD 302
Query: 72 AQAKNKRRDPDAPSVLP--AGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
+ + L G +++KRTSI + + +LE F P+P+ E+I+A+A+ L
Sbjct: 303 SSLSGSGGGASLGAGLAEAVGRRRKKRTSIESGVRVALEKAFLHNPKPTSEEISALADSL 362
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 363 CMEKEVVR 370
>gi|123244|sp|P20914.1|PO3F3_XENLA RecName: Full=POU domain, class 3, transcription factor 3; AltName:
Full=Homeotic protein NRL-20; Short=XlNRL-20
gi|64931|emb|CAA38495.1| Xl-pou protein [Xenopus laevis]
Length = 105
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 20 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 79
QADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 1 QADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS--- 54
Query: 80 DPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
P + + A G K++KRTSI K +LE++F P+P+ ++I +A+ L
Sbjct: 55 -PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAAQEITTLADSL 104
>gi|33636519|gb|AAQ23557.1| RE49429p [Drosophila melanogaster]
Length = 357
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 168 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 224
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 225 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 284
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 285 ERLNMDKEVIR 295
>gi|1450389|gb|AAB04692.1| Pit-1 [Meleagris gallopavo]
Length = 334
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+ LS N LK IL WLEEAE
Sbjct: 189 GYTQTNVGEALAAVH---GSEFSQTTICRFENSQLSFKNACKLKSILSKWLEEAEQVGAL 245
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 246 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 297
Query: 134 NVVR 137
VVR
Sbjct: 298 EVVR 301
>gi|1708266|sp|Q05749.2|PIT1_MELGA RecName: Full=Pituitary-specific positive transcription factor 1;
Short=PIT-1; AltName: Full=Growth hormone factor 1;
Short=GHF-1
gi|1450387|gb|AAB04690.1| Pit-1beta* [Meleagris gallopavo]
Length = 370
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+ LS N LK IL WLEEAE
Sbjct: 225 GYTQTNVGEALAAVH---GSEFSQTTICRFENSQLSFKNACKLKSILSKWLEEAEQVGAL 281
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 282 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 333
Query: 134 NVVR 137
VVR
Sbjct: 334 EVVR 337
>gi|1450388|gb|AAB04691.1| Pit-1* [Meleagris gallopavo]
Length = 342
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+ LS N LK IL WLEEAE
Sbjct: 197 GYTQTNVGEALAAVH---GSEFSQTTICRFENSQLSFKNACKLKSILSKWLEEAEQVGAL 253
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 254 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 305
Query: 134 NVVR 137
VVR
Sbjct: 306 EVVR 309
>gi|293612361|gb|ADE48599.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NDE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|64078|emb|CAA49229.1| Pit-1/GHF-1 [Meleagris gallopavo]
Length = 327
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 72/124 (58%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE+ LS N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFENSQLSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISIAAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|12382254|gb|AAG53085.1|AF268618_1 POU 5 domain protein [Homo sapiens]
gi|293612342|gb|ADE48591.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|293612352|gb|ADE48596.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173154|gb|ADW77354.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173159|gb|ADW77356.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173165|gb|ADW77359.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173223|gb|ADW77386.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173227|gb|ADW77388.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173291|gb|ADW77419.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173297|gb|ADW77422.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173301|gb|ADW77424.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173489|gb|ADW77511.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173491|gb|ADW77512.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173496|gb|ADW77514.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173500|gb|ADW77515.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173503|gb|ADW77516.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173506|gb|ADW77517.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 77/122 (63%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NDE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|402216194|gb|AFQ35838.1| POU class 2 homeobox 3 transcript variant 3 [Ovis aries]
gi|402216196|gb|AFQ35839.1| POU class 2 homeobox 3 transcript variant 4 [Ovis aries]
Length = 221
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%), Gaps = 11/107 (10%)
Query: 38 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPD--APSVLPA-----G 90
SQ+TI RFE+L LS NM LKP+L+ WL +AE+ DP P+ PA G
Sbjct: 9 FSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPS----DPSMSTPNSYPALSEVFG 64
Query: 91 EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
K++KRTSI + +LE F P+PS E+I+ IAE+L ++K VVR
Sbjct: 65 RKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQLSMEKEVVR 111
>gi|42543138|pdb|1O4X|A Chain A, Ternary Complex Of The Dna Binding Domains Of The Oct1 And
Sox2 Transcription Factors With A 19mer Oligonucleotide
From The Hoxb1 Regulatory Element
Length = 167
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE----A 72
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 28 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMAKLKPLLEKWLNDAENLSSD 84
Query: 73 QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
+ + ++P + E+++KRTSI + +LE F +P+ E+I IA++L+++
Sbjct: 85 SSLSSPSALNSPGIEGLSERRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME 144
Query: 133 KNVVR 137
K V+R
Sbjct: 145 KEVIR 149
>gi|229220600|gb|ACQ45346.1| MIP04269p [Drosophila melanogaster]
Length = 421
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 232 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 288
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 289 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 348
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 349 ERLNMDKEVIR 359
>gi|195435099|ref|XP_002065539.1| GK15507 [Drosophila willistoni]
gi|194161624|gb|EDW76525.1| GK15507 [Drosophila willistoni]
Length = 523
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 332 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADTSVAK 388
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F V +P+ E+I ++
Sbjct: 389 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRSTLEQAFMVNCKPTSEEINQLS 448
Query: 127 EKLDLKKNVVR 137
E+L + K VVR
Sbjct: 449 ERLHMDKEVVR 459
>gi|410910758|ref|XP_003968857.1| PREDICTED: POU domain, class 2, transcription factor 2-like
[Takifugu rubripes]
Length = 435
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE A +
Sbjct: 250 GFTQGDVGVAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAVD 306
Query: 77 KRRDPDAPSV---------LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
P S+ LP G++++KRTSI + LE F +P+ E+I +AE
Sbjct: 307 SML-PSPSSISNPMSGFEGLP-GKRRKKRTSIETNVRVVLERNFNTNQKPTSEEILMLAE 364
Query: 128 KLDLKKNVVR 137
+L+++K V+R
Sbjct: 365 QLNMEKEVIR 374
>gi|293612269|gb|ADE48561.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGPILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|194018640|ref|NP_001123406.1| POU class V protein oct-25 [Xenopus (Silurana) tropicalis]
gi|281312442|sp|B3DM25.1|P5F11_XENTR RecName: Full=POU domain, class 5, transcription factor 1.1;
AltName: Full=POU class V protein oct-25
gi|189441842|gb|AAI67674.1| pou5f1.1 protein [Xenopus (Silurana) tropicalis]
Length = 459
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP L+ WL
Sbjct: 246 DLKHKRVSMGYTQADVGYALGVLYGK---MFSQTTICRFESLQLSFKNMCQLKPFLERWL 302
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
EAE N + + V+ K+++RT+I K +LE+YF +P +++ IA+
Sbjct: 303 VEAE-NNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCSKPGAQEMVQIAK 361
Query: 128 KLDLKKNVVR 137
+L++ K+VVR
Sbjct: 362 ELNMDKDVVR 371
>gi|189441854|gb|AAI67702.1| pou5f1.1 protein [Xenopus (Silurana) tropicalis]
Length = 459
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 53/130 (40%), Positives = 76/130 (58%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP L+ WL
Sbjct: 246 DLKHKRVSMGYTQADVGYALGVLYGK---MFSQTTICRFESLQLSFKNMCQLKPFLERWL 302
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
EAE N + + V+ K+++RT+I K +LE+YF +P +++ IA+
Sbjct: 303 VEAE-NNDNLQELINREQVIAQTRKRKRRTNIENIVKGTLESYFMKCSKPGAQEMVQIAK 361
Query: 128 KLDLKKNVVR 137
+L++ K+VVR
Sbjct: 362 ELNMDKDVVR 371
>gi|293612254|gb|ADE48555.1| POU domain transcription factor OCT4 [Homo sapiens]
Length = 360
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TI RFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTIRRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>gi|293612279|gb|ADE48566.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|158005|gb|AAA28732.1| transcription factor [Drosophila melanogaster]
Length = 498
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 309 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 365
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 366 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 425
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 426 ERLNMDKEVIR 436
>gi|24583942|ref|NP_523558.2| POU domain protein 2, isoform A [Drosophila melanogaster]
gi|400746|sp|P31369.1|PDM2A_DROME RecName: Full=POU domain protein 2, isoform A; AltName:
Full=Miti-mere; AltName: Full=Pdm-2; AltName:
Full=Protein didymous; AltName: Full=dOct2; AltName:
Full=dPOU-28
gi|245322|gb|AAB21408.1| POU domain gene [Drosophila melanogaster]
gi|7297966|gb|AAF53209.1| POU domain protein 2, isoform A [Drosophila melanogaster]
gi|363238859|gb|AEW12906.1| FI17318p1 [Drosophila melanogaster]
Length = 498
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 309 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 365
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 366 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 425
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 426 ERLNMDKEVIR 436
>gi|7427527|gb|AAA28830.2| POU homeodomain protein [Drosophila melanogaster]
Length = 430
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 241 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 297
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 298 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 357
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 358 ERLNMDKEVIR 368
>gi|157290|gb|AAA28481.1| dPOU-28 [Drosophila melanogaster]
Length = 475
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 310 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 366
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 367 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 426
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 427 ERLNMDKEVIR 437
>gi|321173347|gb|ADW77444.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|321173283|gb|ADW77415.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173293|gb|ADW77420.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173295|gb|ADW77421.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGFILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|293612389|gb|ADE48610.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173369|gb|ADW77455.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|293612402|gb|ADE48616.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|293612356|gb|ADE48597.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|321173444|gb|ADW77490.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173465|gb|ADW77499.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173471|gb|ADW77502.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173473|gb|ADW77503.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|951376|gb|AAA74657.1| POU-domain protein, partial [Sus scrofa]
Length = 141
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ L S++TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 9 GFTQVDVGLAMGKLY---ANDFSKTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 65
Query: 77 KR----RDPDAPSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 66 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 124
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 125 LHMEKEVIR 133
>gi|321173452|gb|ADW77494.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|293612288|gb|ADE48570.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|55631266|ref|XP_528230.1| PREDICTED: putative POU domain, class 5, transcription factor 1B
[Pan troglodytes]
gi|82802836|gb|ABB92463.1| rcPOU5F1 [Pan troglodytes]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EE + +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEETD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|321173349|gb|ADW77445.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|227430410|ref|NP_001153014.1| putative POU domain, class 5, transcription factor 1B [Homo
sapiens]
gi|357528826|sp|Q06416.2|P5F1B_HUMAN RecName: Full=Putative POU domain, class 5, transcription factor
1B; AltName: Full=Octamer-binding protein 3-like;
AltName: Full=Octamer-binding transcription factor
3-like
gi|12382249|gb|AAG53083.1|AF268615_1 POU 5 domain protein [Homo sapiens]
gi|82802834|gb|ABB92462.1| rcPOU5F1 [Homo sapiens]
gi|94490332|gb|ABF29403.1| POU domain transcription factor Oct-4 [Homo sapiens]
gi|293612283|gb|ADE48568.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|293612381|gb|ADE48606.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|293612398|gb|ADE48614.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173161|gb|ADW77357.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173168|gb|ADW77360.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173401|gb|ADW77470.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173423|gb|ADW77480.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173438|gb|ADW77487.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173442|gb|ADW77489.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173446|gb|ADW77491.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173461|gb|ADW77497.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173463|gb|ADW77498.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173467|gb|ADW77500.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173477|gb|ADW77505.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|321173285|gb|ADW77416.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|293612393|gb|ADE48612.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|640338|pdb|1OCT|C Chain C, Crystal Structure Of The Oct-1 Pou Domain Bound To An
Octamer Site: Dna Recognition With Tethered Dna-Binding
Modules
Length = 156
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 20 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSD 76
Query: 77 KRRDPDAPSVLPAGE----KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
+ P E +++KRTSI + +LE F +P+ E+I IA++L+++
Sbjct: 77 SSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME 136
Query: 133 KNVVR 137
K V+R
Sbjct: 137 KEVIR 141
>gi|449290138|gb|EMC90792.1| POU domain, class 4, transcription factor 1, partial [Columba
livia]
Length = 54
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/42 (97%), Positives = 41/42 (97%)
Query: 96 RTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
RTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVVR
Sbjct: 1 RTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVVR 42
>gi|374087723|gb|AEY82660.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087745|gb|AEY82671.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE L S N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|321173413|gb|ADW77475.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFQQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|374087717|gb|AEY82657.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087729|gb|AEY82663.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE L S N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|374087737|gb|AEY82667.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087749|gb|AEY82673.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE L S N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|321173355|gb|ADW77448.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173361|gb|ADW77451.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|321173353|gb|ADW77447.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|321173148|gb|ADW77351.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|195578787|ref|XP_002079245.1| GD23847 [Drosophila simulans]
gi|194191254|gb|EDX04830.1| GD23847 [Drosophila simulans]
Length = 889
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 17/133 (12%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA---- 72
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 700 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 756
Query: 73 --------QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ S+L G +++KRTSI + +LE F + +P+ E+I+
Sbjct: 757 SGGGVFNINTMTSTLNSTPESIL--GRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQ 814
Query: 125 IAEKLDLKKNVVR 137
++E+L++ K V+R
Sbjct: 815 LSERLNMDKEVIR 827
>gi|374087703|gb|AEY82650.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087725|gb|AEY82661.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE L S N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|374087699|gb|AEY82648.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087721|gb|AEY82659.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE L S N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|930277|emb|CAA38496.1| Xl-pou protein [Xenopus laevis]
gi|930278|emb|CAA38498.1| Xl-pou protein [Xenopus laevis]
Length = 105
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 63/110 (57%), Gaps = 6/110 (5%)
Query: 20 QADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRR 79
QADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ +
Sbjct: 1 QADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDSTTGSP-- 55
Query: 80 DPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
+ + G K++KRTSI K +LE +F P+PS +I ++A+ L
Sbjct: 56 -TNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSL 104
>gi|374087707|gb|AEY82652.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087713|gb|AEY82655.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE L S N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|321173150|gb|ADW77352.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173152|gb|ADW77353.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173221|gb|ADW77385.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173351|gb|ADW77446.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173357|gb|ADW77449.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173365|gb|ADW77453.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173397|gb|ADW77468.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173403|gb|ADW77471.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173408|gb|ADW77473.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173419|gb|ADW77478.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|293612281|gb|ADE48567.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|56694826|gb|AAW23075.1| POU2 [Oikopleura dioica]
Length = 355
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 71/122 (58%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGA-LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ DVG A+ L G+ SQ+TI RFE+L LS NM LKPIL+ WLE+AE
Sbjct: 123 GFTQGDVGVAMGRL----YGSDFSQTTISRFEALNLSFKNMCKLKPILERWLEDAERYLT 178
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
++ + L + +++KRTSI K +LE +F RP+ +I ++E L++++
Sbjct: 179 PNQQSLSTEAQLESARRRKKRTSIDNSVK-ALEMHFLRNSRPTSAEITHLSEDLEMERET 237
Query: 136 VR 137
VR
Sbjct: 238 VR 239
>gi|3914286|sp|Q24705.1|PDM2_DROVI RecName: Full=POU domain protein 2; AltName: Full=Miti-mere;
AltName: Full=Pdm-2; AltName: Full=Protein didymous;
AltName: Full=dOct2; AltName: Full=dPOU-28
gi|541624|gb|AAA21584.1| pdm2, partial [Drosophila virilis]
Length = 471
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 21/135 (15%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ--- 73
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 280 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSVAK 336
Query: 74 -----------AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
N P+ S+L G +++KRTSI + +LE F + +P+ E+I
Sbjct: 337 SAGGVFNINTMTTNLSSTPE--SIL--GRRRKKRTSIETTIRGALEQAFVLNCKPTSEEI 392
Query: 123 AAIAEKLDLKKNVVR 137
++E+L + K VVR
Sbjct: 393 NQLSERLHMDKEVVR 407
>gi|374087741|gb|AEY82669.1| pituitary specific transcription factor-1 [Gallus gallus]
gi|374087743|gb|AEY82670.1| pituitary specific transcription factor-1 [Gallus gallus]
Length = 327
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 71/124 (57%), Gaps = 14/124 (11%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE--AQA 74
G TQ +VG+ALA + SQ+TICRFE L S N LK IL WLEEAE
Sbjct: 182 GYTQTNVGEALAAVH---GSEFSQTTICRFEDLQPSFKNACKLKSILSKWLEEAEQVGAL 238
Query: 75 KNKRRDPDAPSVLPAGEKKRKR-TSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKK 133
N++ + E+KRKR T+I+ K +LE +F Q +PS ++I +AE L+L+K
Sbjct: 239 YNEK--------VGVNERKRKRRTTISISAKEALERHFGEQSKPSSQEIMRMAEGLNLEK 290
Query: 134 NVVR 137
VVR
Sbjct: 291 EVVR 294
>gi|195035739|ref|XP_001989329.1| GH10117 [Drosophila grimshawi]
gi|193905329|gb|EDW04196.1| GH10117 [Drosophila grimshawi]
Length = 540
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 21/135 (15%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE----- 71
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 349 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSGVAK 405
Query: 72 ---------AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
+ N P+ S+L G +++KRTSI + +LE F + +P+ E+I
Sbjct: 406 SGGGVFNINSMTSNLSSTPE--SIL--GRRRKKRTSIETTIRGALEQAFMMNCKPTSEEI 461
Query: 123 AAIAEKLDLKKNVVR 137
++E+L + K VVR
Sbjct: 462 NQLSERLHMDKEVVR 476
>gi|321173399|gb|ADW77469.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|293612373|gb|ADE48604.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173359|gb|ADW77450.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173367|gb|ADW77454.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|19880480|gb|AAM00354.1|AF364594_1 pituitary-specific transcription factor [Plecoglossus altivelis]
Length = 358
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL
Sbjct: 206 DFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKAILAKWL 262
Query: 68 EEAEAQAK--NKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+EAE N++ + E+KRK RT+I+ K +LE F + +PS ++I
Sbjct: 263 DEAEQAGALFNEK--------MGMNERKRKRRTTISLGAKEALERSFGEKSKPSSQEIVR 314
Query: 125 IAEKLDLKKNVVR 137
IAE L L+K VVR
Sbjct: 315 IAEGLHLEKEVVR 327
>gi|195401232|ref|XP_002059218.1| POU domain protein 2 [Drosophila virilis]
gi|194156092|gb|EDW71276.1| POU domain protein 2 [Drosophila virilis]
Length = 707
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 21/135 (15%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ--- 73
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 516 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSSVAK 572
Query: 74 -----------AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
N P+ S+L G +++KRTSI + +LE F + +P+ E+I
Sbjct: 573 SAGGVFNINTMTTNLSSTPE--SIL--GRRRKKRTSIETTIRGALEQAFVLNCKPTSEEI 628
Query: 123 AAIAEKLDLKKNVVR 137
++E+L + K VVR
Sbjct: 629 NQLSERLHMDKEVVR 643
>gi|6573558|pdb|1CQT|A Chain A, Crystal Structure Of A Ternary Complex Containing An Oca-B
Peptide, The Oct-1 Pou Domain, And An Octamer Element
gi|6573559|pdb|1CQT|B Chain B, Crystal Structure Of A Ternary Complex Containing An Oca-B
Peptide, The Oct-1 Pou Domain, And An Octamer Element
Length = 163
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 27 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSD 83
Query: 77 KRRDPDAPSVLPAGE----KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
+ P E +++KRTSI + +LE F +P+ E+I IA++L+++
Sbjct: 84 SSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME 143
Query: 133 KNVVR 137
K V+R
Sbjct: 144 KEVIR 148
>gi|195351091|ref|XP_002042070.1| GM26881 [Drosophila sechellia]
gi|194123894|gb|EDW45937.1| GM26881 [Drosophila sechellia]
Length = 889
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 17/133 (12%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEA---- 72
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 700 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 756
Query: 73 --------QAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ S+L G +++KRTSI + +LE F + +P+ E+I+
Sbjct: 757 SGGGVFNINTMTSTLNSTPESIL--GRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQ 814
Query: 125 IAEKLDLKKNVVR 137
++E+L++ K V+R
Sbjct: 815 LSERLNMDKEVIR 827
>gi|321173287|gb|ADW77417.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|293612387|gb|ADE48609.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173363|gb|ADW77452.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA +L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAHQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|47213747|emb|CAF96412.1| unnamed protein product [Tetraodon nigroviridis]
Length = 341
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 75/130 (57%), Gaps = 14/130 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE A +
Sbjct: 198 GFTQGDVGVAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAVD 254
Query: 77 KRRDPDAPSV---------LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
P S+ LP G++++KRTSI + LE F +P+ E+I +AE
Sbjct: 255 SML-PSPSSISNPMSGFEGLP-GKRRKKRTSIETNVRVILERNFNTNQKPTSEEILLLAE 312
Query: 128 KLDLKKNVVR 137
+L+++K V+R
Sbjct: 313 QLNMEKEVIR 322
>gi|212720385|dbj|BAG84134.1| octamer-binding transcription factor 3 alternative variant [Mus
musculus]
gi|212720389|dbj|BAG84135.1| octamer-binding transcription factor 3 alternative variant [Mus
musculus]
gi|212720391|dbj|BAG84136.1| octamer-binding transcription factor 3 alternative variant [Mus
musculus]
gi|212720397|dbj|BAG84138.1| octamer-binding transcription factor 3 alternative variant [Mus
musculus]
Length = 132
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+
Sbjct: 23 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD---N 75
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
N+ S +KRKRTSI + SLE F P+PS ++I IA +L L+
Sbjct: 76 NENLQEICKSETLVQARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLE 132
>gi|195472413|ref|XP_002088495.1| GE18596 [Drosophila yakuba]
gi|194174596|gb|EDW88207.1| GE18596 [Drosophila yakuba]
Length = 903
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 714 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 770
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 771 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 830
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 831 ERLNMDKEVIR 841
>gi|194861114|ref|XP_001969718.1| GG23792 [Drosophila erecta]
gi|190661585|gb|EDV58777.1| GG23792 [Drosophila erecta]
Length = 909
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 720 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 776
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 777 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 836
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 837 ERLNMDKEVIR 847
>gi|17942539|pdb|1HF0|A Chain A, Crystal Structure Of The Dna-Binding Domain Of Oct-1 Bound
To Dna As A Dimer
gi|17942540|pdb|1HF0|B Chain B, Crystal Structure Of The Dna-Binding Domain Of Oct-1 Bound
To Dna As A Dimer
gi|28373290|pdb|1GT0|C Chain C, Crystal Structure Of A PouHMGDNA TERNARY COMPLEX
Length = 159
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 24 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAENLSSD 80
Query: 77 KRRDPDAPSVLPAGE----KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
+ P E +++KRTSI + +LE F +P+ E+I IA++L+++
Sbjct: 81 SSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME 140
Query: 133 KNVVR 137
K V+R
Sbjct: 141 KEVIR 145
>gi|1742939|emb|CAA71048.1| Af-pdm [Artemia franciscana]
Length = 166
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 76/153 (49%), Gaps = 35/153 (22%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE-AQAK 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+ +
Sbjct: 9 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADNSVGX 65
Query: 76 NKRRDPDAPSVL-------------------------------PAGEKKRKRTSIAAPEK 104
RD + PS + G +++KRTSI +
Sbjct: 66 TAGRDQNPPSQIRQSNXTXPINLSTHSLVQQSYGSPLNTLAHESLGRRRKKRTSIETTVR 125
Query: 105 RSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
SLE F P+P+ E+I+ +A+ L ++K VVR
Sbjct: 126 ISLEKAFLGNPKPTSEEISMLADGLGMEKEVVR 158
>gi|356995364|dbj|BAL14699.1| Oct-3/4, partial [Mus musculus]
Length = 157
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+L+ W+EEA+
Sbjct: 48 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSLKNMCKLRPLLEKWVEEAD---N 100
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
N+ S +KRKRTSI + SLE F P+PS ++I IA +L L+
Sbjct: 101 NENLQEICKSETLVQARKRKRTSIENRVRWSLETMFLKCPKPSLQQITHIANQLGLE 157
>gi|327289479|ref|XP_003229452.1| PREDICTED: POU domain, class 2, transcription factor 2-like [Anolis
carolinensis]
Length = 633
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ--- 73
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 257 GFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 313
Query: 74 ----AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
+ N+ P+ G +++KRTSI + +LE F +P+ E+I IAE+L
Sbjct: 314 STLPSPNQLTSPNMGFDGLPGRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQL 373
Query: 130 DLKKNVVR 137
+++K V+R
Sbjct: 374 NMEKEVIR 381
>gi|24583938|ref|NP_723763.1| POU domain protein 2, isoform B [Drosophila melanogaster]
gi|74948118|sp|Q9VK71.2|PDM2B_DROME RecName: Full=POU domain protein 2, isoform B; AltName:
Full=Miti-mere; AltName: Full=Pdm-2; AltName:
Full=Protein didymous; AltName: Full=dOct2; AltName:
Full=dPOU-28
gi|22946347|gb|AAF53208.2| POU domain protein 2, isoform B [Drosophila melanogaster]
Length = 893
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 704 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 760
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 761 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 820
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 821 ERLNMDKEVIR 831
>gi|195147648|ref|XP_002014791.1| GL19359 [Drosophila persimilis]
gi|194106744|gb|EDW28787.1| GL19359 [Drosophila persimilis]
Length = 361
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 21/135 (15%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ--- 73
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 172 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADTSVAK 228
Query: 74 -----------AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
N P+ S+L G +++KRTSI + +LE F + +P+ E+I
Sbjct: 229 SGGGVFNINTMTTNLSNTPE--SIL--GRRRKKRTSIETTVRTTLEKAFNMNCKPTSEEI 284
Query: 123 AAIAEKLDLKKNVVR 137
++++L + K VVR
Sbjct: 285 NQLSDRLHMDKEVVR 299
>gi|33636555|gb|AAQ23575.1| RE34565p [Drosophila melanogaster]
Length = 893
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 74/131 (56%), Gaps = 13/131 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK- 75
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A++
Sbjct: 704 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADSTVAK 760
Query: 76 ------NKRRDPDAPSVLPA---GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIA 126
N S P G +++KRTSI + +LE F + +P+ E+I+ ++
Sbjct: 761 SGGGVFNINTMTSTLSSTPESILGRRRKKRTSIETTVRTTLEKAFLMNCKPTSEEISQLS 820
Query: 127 EKLDLKKNVVR 137
E+L++ K V+R
Sbjct: 821 ERLNMDKEVIR 831
>gi|91831|pir||JH0597 transcription factor Oct-2, splice form Oct-2d - mouse
Length = 232
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 50 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 106
Query: 77 KR----RDPDAPSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 107 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 165
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 166 LHMEKEVIR 174
>gi|5257300|gb|AAD41274.1|AF132287_1 pituitary specific transcription factor Pit-1 [Cyprinus carpio]
Length = 357
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 75/133 (56%), Gaps = 14/133 (10%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG+ALA ++ SQ+TICRFE+L LS N LK IL WL
Sbjct: 204 DFKLRRIKLGYTQTNVGEALAAVQ---GSEFSQTTICRFENLQLSFKNACKLKSILAKWL 260
Query: 68 EEAEAQAK--NKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
EEAE N++ + E+KRK RT+I+ K +LE F + +PS ++I
Sbjct: 261 EEAEQAGALFNEK--------MGMHERKRKRRTTISLGAKEALERNFVEKSKPSSQEIVR 312
Query: 125 IAEKLDLKKNVVR 137
+AE L L+K VVR
Sbjct: 313 MAEGLHLEKEVVR 325
>gi|536781|emb|CAA56934.1| Oct-2 [Mus musculus]
Length = 210
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 51 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 107
Query: 77 KR----RDPDAPSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 108 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 166
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 167 LHMEKEVIR 175
>gi|334321742|ref|XP_003340155.1| PREDICTED: POU domain, class 2, transcription factor 1-like
[Monodelphis domestica]
Length = 728
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 9/127 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 286 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSD 342
Query: 77 KR-RDPDA-----PSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
P+A P + +++KRTSI + +LE F +P+ E+I IA++L+
Sbjct: 343 SALSSPNALNSPGPGIEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLN 402
Query: 131 LKKNVVR 137
++K V+R
Sbjct: 403 MEKEVIR 409
>gi|4379032|emb|CAA56933.1| Oct-2 [Homo sapiens]
Length = 210
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 51 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 107
Query: 77 KR----RDPDAPSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 108 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 166
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 167 LHMEKEVIR 175
>gi|198474123|ref|XP_001356561.2| GA11534 [Drosophila pseudoobscura pseudoobscura]
gi|198138259|gb|EAL33625.2| GA11534 [Drosophila pseudoobscura pseudoobscura]
Length = 964
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 21/135 (15%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQ--- 73
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+LQ WLE+A+
Sbjct: 775 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLQKWLEDADTSVAK 831
Query: 74 -----------AKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKI 122
N P+ S+L G +++KRTSI + +LE F + +P+ E+I
Sbjct: 832 SGGGVFNINTMTTNLSNTPE--SIL--GRRRKKRTSIETTVRTTLEKAFNMNCKPTSEEI 887
Query: 123 AAIAEKLDLKKNVVR 137
++++L + K VVR
Sbjct: 888 NQLSDRLHMDKEVVR 902
>gi|14329832|emb|CAC40998.1| Pit-1 protein [Anguilla anguilla]
Length = 198
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL
Sbjct: 70 DFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILAKWL 126
Query: 68 EEAEAQAK--NKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
EEAE N+R + E+KRK RT+I+ K +LE F + +PS ++I
Sbjct: 127 EEAEQAGALFNER--------IGINERKRKRRTTISLGAKEALERNFMEKSKPSSQEIVR 178
Query: 125 IAEKLDLKKNVVR 137
+AE L L+K VVR
Sbjct: 179 MAEGLHLEKEVVR 191
>gi|291167755|ref|NP_976034.4| POU domain, class 5, transcription factor 1 isoform 2 [Homo
sapiens]
gi|291167757|ref|NP_001167002.1| POU domain, class 5, transcription factor 1 isoform 2 [Homo
sapiens]
Length = 190
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 68/100 (68%), Gaps = 3/100 (3%)
Query: 38 LSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNKRRDPDAPSVLPAGEKKRKRT 97
SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +N + A +++ A +KRKRT
Sbjct: 9 FSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNENLQEICKAETLVQA--RKRKRT 65
Query: 98 SIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
SI + +LE F P+P+ ++I+ IA++L L+K+VVR
Sbjct: 66 SIENRVRGNLENLFLQCPKPTLQQISHIAQQLGLEKDVVR 105
>gi|293612346|gb|ADE48593.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173156|gb|ADW77355.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173163|gb|ADW77358.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173225|gb|ADW77387.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173289|gb|ADW77418.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173299|gb|ADW77423.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EE + +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEETD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|380807101|gb|AFE75426.1| POU domain, class 2, transcription factor 1 isoform 1, partial
[Macaca mulatta]
Length = 273
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 7/125 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 141 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSD 197
Query: 77 KRRDPDAPSVLPAGE----KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLK 132
+ P E +++KRTSI + +LE F +P+ E+I IA++L+++
Sbjct: 198 SSLSSPSALNSPGIEGLSRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME 257
Query: 133 KNVVR 137
K V+R
Sbjct: 258 KEVIR 262
>gi|51703255|gb|AAU09269.1| pituitary-specific transcription factor Pit-1 [Ctenopharyngodon
idella]
Length = 356
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL
Sbjct: 204 DFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILAKWL 260
Query: 68 EEAEAQAK--NKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
EEAE N++ + E+KRK RT+I+ K +LE F + +PS ++I
Sbjct: 261 EEAEQAGALFNEK--------MGMHERKRKRRTTISLGAKEALERNFVEKSKPSSQEIVR 312
Query: 125 IAEKLDLKKNVVR 137
+AE L L+K VVR
Sbjct: 313 MAEGLHLEKEVVR 325
>gi|47086331|ref|NP_998016.1| pituitary-specific positive transcription factor 1 [Danio rerio]
gi|37222775|gb|AAQ90147.1| pituitary-specific transcription factor [Danio rerio]
gi|190340169|gb|AAI62244.1| POU domain, class 1, transcription factor 1 [Danio rerio]
Length = 350
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 14/133 (10%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL
Sbjct: 200 DFKLRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACKLKSILAKWL 256
Query: 68 EEAEAQAK--NKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
EEAE N++ + E+KRK RT+I+ K +LE F + +PS ++I
Sbjct: 257 EEAEQAGALFNEK--------MGLHERKRKRRTTISLGAKEALERSFVEKSKPSSQEIVR 308
Query: 125 IAEKLDLKKNVVR 137
+AE L L+K VVR
Sbjct: 309 MAEGLHLEKEVVR 321
>gi|321173450|gb|ADW77493.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173469|gb|ADW77501.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173479|gb|ADW77506.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWEEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|148692343|gb|EDL24290.1| POU domain, class 2, transcription factor 2, isoform CRA_a [Mus
musculus]
Length = 402
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 199 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 255
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 256 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 314
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 315 LIAEQLHMEKEVIR 328
>gi|321173405|gb|ADW77472.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173421|gb|ADW77479.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L+P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K++V
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDMV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|395854062|ref|XP_003799517.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 4
[Otolemur garnettii]
Length = 400
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|351542193|ref|NP_001234923.1| POU domain, class 2, transcription factor 2 isoform 4 [Homo
sapiens]
gi|13543913|gb|AAH06101.1| POU2F2 protein [Homo sapiens]
gi|30583715|gb|AAP36106.1| POU domain, class 2, transcription factor 2 [Homo sapiens]
gi|119577506|gb|EAW57102.1| POU domain, class 2, transcription factor 2, isoform CRA_e [Homo
sapiens]
Length = 400
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|426388922|ref|XP_004060878.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Gorilla gorilla gorilla]
Length = 400
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|53490|emb|CAA41008.1| Oct2.5 transcription factor [Mus musculus]
Length = 583
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 202 GFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 258
Query: 77 KR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 259 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 317
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 318 LHMEKEVIR 326
>gi|324511988|gb|ADY44977.1| Homeobox protein ceh-18 [Ascaris suum]
Length = 340
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 44/166 (26%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R+ F G TQ DVG AL + G SQ+TI RFE+L LS NM L+P+L+ WL +AE
Sbjct: 166 RIKF-GFTQGDVGMALG--RRYGT-DFSQTTISRFEALNLSFKNMCKLRPLLKEWLADAE 221
Query: 72 AQAKN----------KRRDPD-APSVLPAG-----------------------------E 91
A N +R D S P G
Sbjct: 222 AAIANGASASDLLEAQRNDSSMTQSGTPTGIQVAAMVNSATEGSPSPNGSCIGTPGIPLR 281
Query: 92 KKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVVR 137
K+RKRT++ A ++ +L+ YF + PRP +++A IA L+L ++VVR
Sbjct: 282 KRRKRTNLDAAQRAALDGYFQLNPRPDHDRMAQIAGTLELDRDVVR 327
>gi|402905716|ref|XP_003915660.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Papio anubis]
Length = 400
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|220830|dbj|BAA02355.1| Oct-1 [Rattus norvegicus]
Length = 154
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE----A 72
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 19 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSD 75
Query: 73 QAKNKRRDPDAPSVLPAG--EKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ ++P + G +++KRTSI + +LE F +P+ E I IAE+L+
Sbjct: 76 STASSPSALNSPGLGAEGLNRRRKKRTSIETNIRVALEKSFMENQKPTSEDITLIAEQLN 135
Query: 131 LKKNVVR 137
++K V+R
Sbjct: 136 MEKEVIR 142
>gi|53488|emb|CAA41007.1| Oct2.4 transcription factor [Mus musculus]
Length = 400
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|293612400|gb|ADE48615.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 7/121 (5%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG L L SQ TICRFE+L LS NM L P+LQ W+EEA+ +N
Sbjct: 161 GYTQADVGLILGVLF---EKVFSQKTICRFEALQLSFKNMCKLWPLLQKWVEEAD-NNEN 216
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+VV
Sbjct: 217 LQEICKAETLMQA--RKRKRTSIQNRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDVV 273
Query: 137 R 137
R
Sbjct: 274 R 274
>gi|333360878|ref|NP_001193955.1| POU domain, class 2, transcription factor 2 isoform 3 [Homo
sapiens]
gi|35129|emb|CAA37562.1| unnamed protein product [Homo sapiens]
gi|189363|gb|AAA36389.1| Oct-2 factor [Homo sapiens]
Length = 467
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 213 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 269
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 270 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 328
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 329 LIAEQLHMEKEVIR 342
>gi|254588024|ref|NP_001157026.1| POU domain, class 2, transcription factor 2 isoform 4 [Mus
musculus]
gi|288174|emb|CAA37702.1| Oct2b [Mus musculus]
Length = 583
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 202 GFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 258
Query: 77 KR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 259 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 317
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 318 LHMEKEVIR 326
>gi|1004293|emb|CAA57306.1| pituitary transcription factor [Sparus aurata]
Length = 371
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 75/134 (55%), Gaps = 16/134 (11%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D R + G TQ +VG+ALA + SQ+TICRFE+L LS N LK IL WL
Sbjct: 208 DFKIRRIKLGYTQTNVGEALAAVH---GSEFSQTTICRFENLQLSFKNACTLKAILAKWL 264
Query: 68 EEAE---AQAKNKRRDPDAPSVLPAGEKKRK-RTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+EAE A +K + E+KRK RT+I+ K +LE F + +PS ++IA
Sbjct: 265 DEAELAGALYSDK---------IGMNERKRKRRTTISLGAKEALERSFVEKSKPSSQEIA 315
Query: 124 AIAEKLDLKKNVVR 137
IA+ L L+K VVR
Sbjct: 316 RIAKGLHLEKEVVR 329
>gi|319401869|ref|NP_001187100.1| Oct2 transcription factor [Ictalurus punctatus]
gi|2058332|emb|CAA73199.1| Oct-2 beta transcription factor [Ictalurus punctatus]
Length = 480
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 74/129 (57%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 220 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLTDAETMSMD 276
Query: 77 KRRDPDAPSV--------LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
+ LPA +++KRTSI + +LE F+ +P+ E+I IAE+
Sbjct: 277 STLPSPSSLSSPSLGFEGLPA-RRRKKRTSIETNVRVALERSFSTNQKPTSEEILLIAEQ 335
Query: 129 LDLKKNVVR 137
L+++K V+R
Sbjct: 336 LNMEKEVIR 344
>gi|148223651|ref|NP_001081583.1| POU class V protein oct-60 [Xenopus laevis]
gi|82177476|sp|Q91989.1|P5F13_XENLA RecName: Full=POU domain, class 5, transcription factor 1.3;
AltName: Full=POU class V protein oct-60; Short=XOct-60;
Short=XlPOU-60
gi|785052|emb|CAA60136.1| POU-60 [Xenopus laevis]
gi|47123925|gb|AAH70557.1| LOC397936 protein [Xenopus laevis]
Length = 426
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ D+G AL L G + SQ+TICRFESL L+ NM LKP+L+ WL EAE
Sbjct: 225 GYTQGDIGHALGIL----YGKMFSQTTICRFESLQLTFKNMCKLKPLLEQWLGEAE-NND 279
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + K++ RT K LE +F +P ++ IA++L L+K+V
Sbjct: 280 NLQEMIHKAQIEEQNRKRKMRTCFDTVLKGQLEGHFMCNQKPGARELTEIAKELSLEKDV 339
Query: 136 VR 137
VR
Sbjct: 340 VR 341
>gi|297789|emb|CAA77953.1| octamer binding protein 3_like sequence [Homo sapiens]
Length = 359
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 76/122 (62%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS N+ L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNICKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|426388924|ref|XP_004060879.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 4
[Gorilla gorilla gorilla]
Length = 467
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 213 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 269
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 270 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 328
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 329 LIAEQLHMEKEVIR 342
>gi|214919|gb|AAA49997.1| XOCT-60 [Xenopus laevis]
Length = 426
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 66/122 (54%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ D+G AL L G + SQ+TICRFESL L+ NM LKP+L+ WL EAE
Sbjct: 225 GYTQGDIGHALGIL----YGKMFSQTTICRFESLQLTFKNMCKLKPLLEQWLGEAE-NND 279
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + K++ RT K LE +F +P ++ IA++L L+K+V
Sbjct: 280 NLQEMIHKAQIEEQNRKRKMRTCFDTVLKGQLEGHFMCNQKPGARELTEIAKELSLEKDV 339
Query: 136 VR 137
VR
Sbjct: 340 VR 341
>gi|321173440|gb|ADW77488.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173459|gb|ADW77496.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173475|gb|ADW77504.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173481|gb|ADW77507.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ + + IA++L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRMRGNLENLFLQCPKPT-LQTSHIAQQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|444730672|gb|ELW71046.1| POU domain, class 2, transcription factor 2 [Tupaia chinensis]
Length = 551
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 184 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 240
Query: 72 AQAKNKR----RDPDAPSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 241 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 299
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 300 LIAEQLHMEKEVIR 313
>gi|321173395|gb|ADW77467.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173415|gb|ADW77476.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
gi|321173417|gb|ADW77477.1| POU domain transcription factor OCT4-pg1 [Homo sapiens]
Length = 359
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 75/122 (61%), Gaps = 9/122 (7%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLILGVL----FGKVFSQKTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE F P+P+ +I+ IA +L L+K+V
Sbjct: 216 NLQEICKAETLMQA--RKRKRTSIENRVRGNLENLFLQCPKPT-LQISHIALQLGLEKDV 272
Query: 136 VR 137
VR
Sbjct: 273 VR 274
>gi|194332693|ref|NP_001123836.1| POU class V protein oct-60 [Xenopus (Silurana) tropicalis]
gi|284433514|sp|B3DM23.1|P5F13_XENTR RecName: Full=POU domain, class 5, transcription factor 1.3;
AltName: Full=POU class V protein oct-60
gi|189442015|gb|AAI67672.1| LOC100170593 protein [Xenopus (Silurana) tropicalis]
Length = 423
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 17 GVTQADVGKALANLKLPGVGAL-SQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQ D+G AL L G + SQ+TICRFESL L+ NM LKP+L+ WL EAE
Sbjct: 230 GYTQGDIGHALGIL----YGKMFSQTTICRFESLQLTFKNMCKLKPLLEQWLGEAE-NND 284
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + + K++ RT + K LE +F +P ++A IA++L L+K+V
Sbjct: 285 NLQEMIHKAQLEEQNRKRKMRTCFDSVLKGRLEGHFMCNQKPGARELAEIAKELGLEKDV 344
Query: 136 VR 137
VR
Sbjct: 345 VR 346
>gi|440894140|gb|ELR46671.1| POU domain, class 2, transcription factor 2, partial [Bos grunniens
mutus]
Length = 594
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 210 GFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 266
Query: 77 KR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 267 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 325
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 326 LHMEKEVIR 334
>gi|403310682|ref|NP_001258133.1| POU domain, class 2, transcription factor 2 [Rattus norvegicus]
Length = 458
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|297277174|ref|XP_002808241.1| PREDICTED: LOW QUALITY PROTEIN: POU domain, class 2, transcription
factor 2-like [Macaca mulatta]
Length = 467
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 213 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 269
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 270 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 328
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 329 LIAEQLHMEKEVIR 342
>gi|344270145|ref|XP_003406906.1| PREDICTED: POU domain, class 2, transcription factor 2 [Loxodonta
africana]
Length = 467
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 213 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 269
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 270 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 328
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 329 LIAEQLHMEKEVIR 342
>gi|53854346|gb|AAU95617.1| POU domain transcription factor Oct-2 C3 isoform [Mus musculus]
Length = 544
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 214 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 270
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 271 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 329
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 330 LIAEQLHMEKEVIR 343
>gi|395854060|ref|XP_003799516.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 3
[Otolemur garnettii]
Length = 587
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE + +
Sbjct: 202 GFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAETMSVD 258
Query: 77 KR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEK 128
P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I IAE+
Sbjct: 259 SSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEILLIAEQ 317
Query: 129 LDLKKNVVR 137
L ++K V+R
Sbjct: 318 LHMEKEVIR 326
>gi|226218|prf||1501353A lymphoid specific transcription factor
Length = 463
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|345784983|ref|XP_866292.2| PREDICTED: POU domain, class 2, transcription factor 2 isoform 7
[Canis lupus familiaris]
Length = 413
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 210 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 266
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 267 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 325
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 326 LIAEQLHMEKEVIR 339
>gi|426388918|ref|XP_004060876.1| PREDICTED: POU domain, class 2, transcription factor 2 isoform 1
[Gorilla gorilla gorilla]
Length = 463
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
>gi|254588026|ref|NP_001157027.1| POU domain, class 2, transcription factor 2 isoform 3 [Mus
musculus]
gi|76779322|gb|AAI05921.1| Pou2f2 protein [Mus musculus]
Length = 485
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 219 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 275
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 276 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 334
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 335 LIAEQLHMEKEVIR 348
>gi|53482|emb|CAA41004.1| Oct2.1 transcription factor [Mus musculus]
Length = 463
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ L SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 197 RRIKLGFTQGDVGLAMGKLY---GNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 253
Query: 72 AQAKNKR-RDPD---APSV----LPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIA 123
+ + P+ +PS+ LP G +++KRTSI + +LE F +P+ E+I
Sbjct: 254 TMSVDSSLPSPNQLSSPSLGFDGLP-GRRRKKRTSIETNVRFALEKSFLANQKPTSEEIL 312
Query: 124 AIAEKLDLKKNVVR 137
IAE+L ++K V+R
Sbjct: 313 LIAEQLHMEKEVIR 326
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,209,355,930
Number of Sequences: 23463169
Number of extensions: 82224348
Number of successful extensions: 261722
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 258177
Number of HSP's gapped (non-prelim): 2029
length of query: 145
length of database: 8,064,228,071
effective HSP length: 109
effective length of query: 36
effective length of database: 9,801,709,946
effective search space: 352861558056
effective search space used: 352861558056
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)