BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy17899
(145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P24350|IPOU_DROME Inhibitory POU protein OS=Drosophila melanogaster GN=acj6 PE=1 SV=3
Length = 396
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 122/126 (96%), Positives = 123/126 (97%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 240 RRIKLGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 299
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL
Sbjct: 300 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 359
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 360 KKNVVR 365
>sp|Q01851|PO4F1_HUMAN POU domain, class 4, transcription factor 1 OS=Homo sapiens
GN=POU4F1 PE=2 SV=4
Length = 419
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 278 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 337
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 338 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 394
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 395 KKNVVR 400
>sp|P17208|PO4F1_MOUSE POU domain, class 4, transcription factor 1 OS=Mus musculus
GN=Pou4f1 PE=2 SV=3
Length = 421
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 280 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 339
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ K P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 340 GAQREKMNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 396
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 397 KKNVVR 402
>sp|P20266|PO4F1_RAT POU domain, class 4, transcription factor 1 (Fragment) OS=Rattus
norvegicus GN=Pou4f1 PE=2 SV=2
Length = 128
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/126 (80%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 1 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 60
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+R + P + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDL
Sbjct: 61 GA---QREKMNKPELFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDL 117
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 118 KKNVVR 123
>sp|Q90435|PO4F3_DANRE POU domain, class 4, transcription factor 3 OS=Danio rerio
GN=pou4f3 PE=2 SV=2
Length = 331
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 99/121 (81%), Positives = 106/121 (87%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAEA +
Sbjct: 195 GVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYRE 254
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K PD + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDLKKNVV
Sbjct: 255 KNGKPD---LFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVV 311
Query: 137 R 137
R
Sbjct: 312 R 312
>sp|Q63934|PO4F2_MOUSE POU domain, class 4, transcription factor 2 OS=Mus musculus
GN=Pou4f2 PE=2 SV=1
Length = 411
Score = 198 bits (503), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 270 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 329
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 330 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 386
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 387 KKNVVR 392
>sp|Q12837|PO4F2_HUMAN POU domain, class 4, transcription factor 2 OS=Homo sapiens
GN=POU4F2 PE=1 SV=2
Length = 409
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/126 (80%), Positives = 107/126 (84%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE
Sbjct: 268 RRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 327
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
K+ R P + EKKRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 328 ---KSHREKLTKPELFNGAEKKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 384
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 385 KKNVVR 390
>sp|Q15319|PO4F3_HUMAN POU domain, class 4, transcription factor 3 OS=Homo sapiens
GN=POU4F3 PE=1 SV=1
Length = 338
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>sp|Q63955|PO4F3_MOUSE POU domain, class 4, transcription factor 3 OS=Mus musculus
GN=Pou4f3 PE=2 SV=2
Length = 338
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 108/126 (85%), Gaps = 3/126 (2%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + GVTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKP+LQAWLEEAE
Sbjct: 197 RRIKLGVTQADVGAALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAE 256
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
A + K P+ + E+KRKRTSIAAPEKRSLEAYFA+QPRPS EKIAAIAEKLDL
Sbjct: 257 AAYREKNSKPE---LFNGSERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDL 313
Query: 132 KKNVVR 137
KKNVVR
Sbjct: 314 KKNVVR 319
>sp|Q91998|BRN3_CHICK Brain-specific homeobox/POU domain protein 3 OS=Gallus gallus
GN=BRN3 PE=2 SV=1
Length = 341
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/121 (80%), Positives = 105/121 (86%), Gaps = 3/121 (2%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVG ALANLK+PGVG LSQSTICRFESLTLSHNNM+ALKPIL+AWLEEAE +
Sbjct: 205 GVTQADVGSALANLKIPGVGCLSQSTICRFESLTLSHNNMVALKPILEAWLEEAERAQRE 264
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K P+ + G+KKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 265 KMTKPE---IYTGGDKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 321
Query: 137 R 137
R
Sbjct: 322 R 322
>sp|P55968|PO4F1_CHICK POU domain, class 4, transcription factor 1 (Fragment) OS=Gallus
gallus GN=POU4F1 PE=3 SV=1
Length = 116
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 99/119 (83%), Positives = 104/119 (87%), Gaps = 3/119 (2%)
Query: 18 VTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKNK 77
VTQADVG ALANLK+PGVG+LSQSTICRFESLTLSHNNMIALKPILQAWLEEAE + K
Sbjct: 1 VTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPILQAWLEEAEGAQREK 60
Query: 78 RRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
P+ + GEKKRKRTSIAAPEKRSLEAYFAVQPRPS EKIAAIAEKLDLKKNVV
Sbjct: 61 MNKPE---LFNGGEKKRKRTSIAAPEKRSLEAYFAVQPRPSSEKIAAIAEKLDLKKNVV 116
>sp|P13528|UNC86_CAEEL Transcription factor unc-86 OS=Caenorhabditis elegans GN=unc-86
PE=2 SV=1
Length = 467
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/121 (74%), Positives = 103/121 (85%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
GVTQADVGKALA+LK+PGVG+LSQSTICRFESLTLSHNNM+ALKPIL +WLE+AE K
Sbjct: 288 GVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQ 347
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
K D +LP +KKRKRTSIAAPEKR LE +F QPRPSGE+IA+IA++LDLKKNVV
Sbjct: 348 KDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVV 407
Query: 137 R 137
R
Sbjct: 408 R 408
>sp|P16241|CF1A_DROME POU domain protein CF1A OS=Drosophila melanogaster GN=vvl PE=2 SV=5
Length = 427
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/127 (46%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 230 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 286
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K +LE +F QP+PS ++I ++A+ L
Sbjct: 287 STTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQ 342
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 343 LEKEVVR 349
>sp|Q17237|SGF3_BOMMO Silk gland factor 3 OS=Bombyx mori GN=SGF3 PE=2 SV=1
Length = 351
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+LQ WLEEA+
Sbjct: 167 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLQKWLEEAD 223
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE +F QP+PS ++I ++A+ L L
Sbjct: 224 STTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQL 280
Query: 132 KKNVVR 137
+K VVR
Sbjct: 281 EKEVVR 286
>sp|P56224|P3F3A_DANRE POU domain, class 3, transcription factor 3-A OS=Danio rerio
GN=pou3f3a PE=2 SV=2
Length = 438
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 265 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSTTGS 321
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L L+K V
Sbjct: 322 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQLEKEV 377
Query: 136 VR 137
VR
Sbjct: 378 VR 379
>sp|Q29087|PO3F3_PIG POU domain, class 3, transcription factor 3 (Fragment) OS=Sus
scrofa GN=POU3F3 PE=2 SV=1
Length = 131
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 9 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 65
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 66 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 121
Query: 136 VR 137
VR
Sbjct: 122 VR 123
>sp|P56222|PO3F2_RAT POU domain, class 3, transcription factor 2 OS=Rattus norvegicus
GN=Pou3f2 PE=2 SV=1
Length = 445
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 282 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 338
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 339 SSSGSPT---SIDKIASQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQL 395
Query: 132 KKNVVR 137
+K VVR
Sbjct: 396 EKEVVR 401
>sp|P31360|PO3F2_MOUSE POU domain, class 3, transcription factor 2 OS=Mus musculus
GN=Pou3f2 PE=2 SV=1
Length = 445
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 282 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 338
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 339 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 394
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 395 LEKEVVR 401
>sp|P20265|PO3F2_HUMAN POU domain, class 3, transcription factor 2 OS=Homo sapiens
GN=POU3F2 PE=1 SV=4
Length = 443
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 280 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 336
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS ++I ++A+ L
Sbjct: 337 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADSLQ 392
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 393 LEKEVVR 399
>sp|P70030|P3F2B_XENLA POU domain, class 3, transcription factor 2-B OS=Xenopus laevis
GN=pou3f2-b PE=2 SV=1
Length = 385
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 79/127 (62%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 222 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 278
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P+ ++I ++A+ L
Sbjct: 279 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAAQEITSLADSLQ 334
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 335 LEKEVVR 341
>sp|P31365|P3F2A_XENLA POU domain, class 3, transcription factor 2-A OS=Xenopus laevis
GN=pou3f2-a PE=2 SV=2
Length = 382
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 219 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 275
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+PS +I ++A+ L
Sbjct: 276 SSSGS----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAPEITSLADSLQ 331
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 332 LEKEVVR 338
>sp|Q63262|PO3F3_RAT POU domain, class 3, transcription factor 3 OS=Rattus norvegicus
GN=Pou3f3 PE=1 SV=2
Length = 497
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 334 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 390
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 391 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 446
Query: 136 VR 137
VR
Sbjct: 447 VR 448
>sp|P31361|PO3F3_MOUSE POU domain, class 3, transcription factor 3 OS=Mus musculus
GN=Pou3f3 PE=2 SV=2
Length = 497
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 334 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 390
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 391 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 446
Query: 136 VR 137
VR
Sbjct: 447 VR 448
>sp|P20264|PO3F3_HUMAN POU domain, class 3, transcription factor 3 OS=Homo sapiens
GN=POU3F3 PE=2 SV=2
Length = 500
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 75/122 (61%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 337 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 393
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K +LE++F P+PS ++I +A+ L L+K V
Sbjct: 394 ----PTSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITNLADSLQLEKEV 449
Query: 136 VR 137
VR
Sbjct: 450 VR 451
>sp|P79746|PO3F2_DANRE POU domain, class 3, transcription factor 2 OS=Danio rerio
GN=pou3f2 PE=1 SV=1
Length = 378
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 78/127 (61%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 218 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 274
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + + P + + A G K++KRTSI K +LE++F P+P+ +I ++A+ L
Sbjct: 275 STSGS----PTSLDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPAASEITSLADSLQ 330
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 331 LEKEVVR 337
>sp|P21952|PO3F1_MOUSE POU domain, class 3, transcription factor 1 OS=Mus musculus
GN=Pou3f1 PE=1 SV=1
Length = 449
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 263 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 319
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 320 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 376
Query: 132 KKNVVR 137
+K VVR
Sbjct: 377 EKEVVR 382
>sp|P20267|PO3F1_RAT POU domain, class 3, transcription factor 1 OS=Rattus norvegicus
GN=Pou3f1 PE=2 SV=2
Length = 451
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>sp|Q03052|PO3F1_HUMAN POU domain, class 3, transcription factor 1 OS=Homo sapiens
GN=POU3F1 PE=2 SV=3
Length = 451
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 265 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 321
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + + G K++KRTSI K +LE++F P+PS +I +A+ L L
Sbjct: 322 SSSGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALESHFLKCPKPSAHEITGLADSLQL 378
Query: 132 KKNVVR 137
+K VVR
Sbjct: 379 EKEVVR 384
>sp|P62516|PO3F4_RAT POU domain, class 3, transcription factor 4 OS=Rattus norvegicus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>sp|P62515|PO3F4_MOUSE POU domain, class 3, transcription factor 4 OS=Mus musculus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>sp|P31364|P3F4A_XENLA POU domain, class 3, transcription factor 4-A OS=Xenopus laevis
GN=pou3f4-a PE=2 SV=2
Length = 361
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/127 (44%), Positives = 75/127 (59%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ N P + + A G K++KRTSI K LE +F P+P+ +I ++A+ L
Sbjct: 261 SSTGN----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAALEITSLADSLQ 316
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 317 LEKEVVR 323
>sp|Q561L5|P3F1B_XENLA POU domain, class 3, transcription factor 1-B OS=Xenopus laevis
GN=pou3f1-b PE=2 SV=1
Length = 375
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 212 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 269 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 325
Query: 132 KKNVVR 137
+K VVR
Sbjct: 326 EKEVVR 331
>sp|A1L0Z1|PO3F4_XENTR POU domain, class 3, transcription factor 4 OS=Xenopus tropicalis
GN=pou3f4 PE=2 SV=1
Length = 360
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 203 RRIKLGFTQADVGLALGTLY---GNVFSQATICRFEALQLSFKNMCKLKPLLNKWLEEAD 259
Query: 72 AQAKNKRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLD 130
+ + P + + A G K++KRTSI K LE +F P+P+ ++I+++A+ L
Sbjct: 260 SSTGS----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQ 315
Query: 131 LKKNVVR 137
L+K VVR
Sbjct: 316 LEKEVVR 322
>sp|Q812B1|PO3F4_MESAU POU domain, class 3, transcription factor 4 OS=Mesocricetus auratus
GN=Pou3f4 PE=2 SV=1
Length = 361
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>sp|Q4QQQ7|PO3F1_XENTR POU domain, class 3, transcription factor 1 OS=Xenopus tropicalis
GN=pou3f1 PE=2 SV=1
Length = 375
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 212 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 269 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 325
Query: 132 KKNVVR 137
+K VVR
Sbjct: 326 EKEVVR 331
>sp|P31363|P3F1A_XENLA POU domain, class 3, transcription factor 1-A OS=Xenopus laevis
GN=pou3f1-a PE=2 SV=2
Length = 375
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE +
Sbjct: 212 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETD 268
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + + G K++KRTSI K +LE +F P+PS +I ++A+ L L
Sbjct: 269 STTGSPT---NLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITSLADSLQL 325
Query: 132 KKNVVR 137
+K VVR
Sbjct: 326 EKEVVR 331
>sp|P31370|POU1_DUGJA POU domain protein 1 OS=Dugesia japonica GN=POU1 PE=2 SV=1
Length = 559
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 76/126 (60%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM L+P+LQ WL EA+
Sbjct: 277 RRIKLGYTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLRPLLQKWLHEAD 333
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ +++ + + K++KRTSI A K LE+ F +PS + I+++AEKL L
Sbjct: 334 SSSESP---TNFDKISAQSRKRKKRTSIEANVKSILESSFMKLSKPSAQDISSLAEKLSL 390
Query: 132 KKNVVR 137
+K VVR
Sbjct: 391 EKEVVR 396
>sp|P49335|PO3F4_HUMAN POU domain, class 3, transcription factor 4 OS=Homo sapiens
GN=POU3F4 PE=1 SV=2
Length = 361
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE L LS NM LKP+L WLEEA+
Sbjct: 204 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEGLQLSFKNMCKLKPLLNKWLEEAD 260
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K LE +F P+P+ ++I+++A+ L L
Sbjct: 261 SSTGSPT---SIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAAQEISSLADSLQL 317
Query: 132 KKNVVR 137
+K VVR
Sbjct: 318 EKEVVR 323
>sp|Q90482|PO3F1_DANRE POU domain, class 3, transcription factor 1 OS=Danio rerio
GN=pou3f1 PE=2 SV=1
Length = 368
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEE ++ N
Sbjct: 210 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEETDS---N 263
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + G K++KRTSI K +LE +F P+PS +I +A L L+K VV
Sbjct: 264 TGSPTNLDKIAAQGRKRKKRTSIEVGVKGALENHFLKCPKPSAHEITTLAGTLQLEKEVV 323
Query: 137 R 137
R
Sbjct: 324 R 324
>sp|P79745|P3F3B_DANRE POU domain, class 3, transcription factor 3-B OS=Danio rerio
GN=pou3f3b PE=1 SV=1
Length = 443
Score = 94.0 bits (232), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/126 (43%), Positives = 75/126 (59%), Gaps = 6/126 (4%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA+
Sbjct: 256 RRIKLGFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEAD 312
Query: 72 AQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDL 131
+ + + G K++KRTSI K +LE++F P+PS ++I ++A+ L L
Sbjct: 313 SSTGSP---TSIDKIAAQGRKRKKRTSIEVSVKGALESHFLKCPKPSAQEITSLADNLQL 369
Query: 132 KKNVVR 137
+K VVR
Sbjct: 370 EKEVVR 375
>sp|Q90270|PO5F1_DANRE POU domain, class 5, transcription factor 1 OS=Danio rerio
GN=pou5f1 PE=2 SV=1
Length = 472
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL NL SQ+TICRFE+L LS NM LKP+LQ WL EAE ++N
Sbjct: 272 GFTQADVGLALGNLY---GKMFSQTTICRFEALQLSFKNMCKLKPLLQRWLNEAE-NSEN 327
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ V K+++RTS+ + +LE+YF P+P+ +I I++ L L+++VV
Sbjct: 328 PQDMYKIERVFVDTRKRKRRTSLEGTVRSALESYFVKCPKPNTLEITHISDDLGLERDVV 387
Query: 137 R 137
R
Sbjct: 388 R 388
>sp|P42571|PO2F3_RAT POU domain, class 2, transcription factor 3 OS=Rattus norvegicus
GN=Pou2f3 PE=2 SV=1
Length = 430
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/128 (46%), Positives = 76/128 (59%), Gaps = 14/128 (10%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE+
Sbjct: 199 GFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAESSPA- 254
Query: 77 KRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKL 129
DP A PS P G K++KRTSI + +LE F P+PS E+I+ IAE+L
Sbjct: 255 ---DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISMIAEQL 311
Query: 130 DLKKNVVR 137
++K VVR
Sbjct: 312 SMEKEVVR 319
>sp|Q6DJN3|P3F4B_XENLA POU domain, class 3, transcription factor 4-B OS=Xenopus laevis
GN=pou3f4-b PE=2 SV=1
Length = 356
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 74/122 (60%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 204 GFTQADVGLALGTLY---GNVFSQTTICRFEALQLSFKNMCKLKPLLNKWLEEADSSTGS 260
Query: 77 KRRDPDAPSVLPA-GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
P + + A G K++KRTSI K LE +F P+P+ +I+++A+ L L+K V
Sbjct: 261 ----PTSIDKIAAQGRKRKKRTSIEVSVKGVLETHFLKCPKPAALEISSLADSLQLEKEV 316
Query: 136 VR 137
VR
Sbjct: 317 VR 318
>sp|Q9UKI9|PO2F3_HUMAN POU domain, class 2, transcription factor 3 OS=Homo sapiens
GN=POU2F3 PE=2 SV=3
Length = 436
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 78/133 (58%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL +AE
Sbjct: 201 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAE 257
Query: 72 AQAKNKRRDPD--APSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP PS P+ G K++KRTSI + +LE F P+PS E+I+
Sbjct: 258 SSPS----DPSVSTPSSYPSLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 313
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 314 IAEQLSMEKEVVR 326
>sp|P31362|PO2F3_MOUSE POU domain, class 2, transcription factor 3 OS=Mus musculus
GN=Pou2f3 PE=2 SV=2
Length = 431
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 77/133 (57%), Gaps = 14/133 (10%)
Query: 12 RVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAE 71
R + G TQ DVG A+ KL G SQ+TI RFE+L LS NM LKP+L+ WL + E
Sbjct: 194 RRIKLGFTQGDVGLAMG--KLYG-NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDPE 250
Query: 72 AQAKNKRRDPDA--PSVLPA-----GEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAA 124
+ DP A PS P G K++KRTSI + +LE F P+PS E+I+
Sbjct: 251 SSPS----DPSASTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSSEEISM 306
Query: 125 IAEKLDLKKNVVR 137
IAE+L ++K VVR
Sbjct: 307 IAEQLSMEKEVVR 319
>sp|B7ZQA9|P5F12_XENLA POU domain, class 5, transcription factor 1.2 OS=Xenopus laevis
GN=pou5f1.2 PE=1 SV=1
Length = 445
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 56/130 (43%), Positives = 79/130 (60%), Gaps = 4/130 (3%)
Query: 8 DVYSRVLFTGVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWL 67
D+ + + G TQADVG AL L SQ+TICRFESL LS NM LKP+L++WL
Sbjct: 232 DLKHKRITMGYTQADVGYALGVLFGK---TFSQTTICRFESLQLSFKNMCKLKPLLRSWL 288
Query: 68 EEAEAQAKNKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAE 127
E E +N + ++P +K++ RTSI K +LE YF +PS ++IA IA
Sbjct: 289 HEVE-NNENLQEIISRGQIIPQVQKRKHRTSIENNVKCTLENYFMQCSKPSAQEIAQIAR 347
Query: 128 KLDLKKNVVR 137
+L+++K+VVR
Sbjct: 348 ELNMEKDVVR 357
>sp|Q5TM49|PO5F1_MACMU POU domain, class 5, transcription factor 1 OS=Macaca mulatta
GN=POU5F1 PE=1 SV=1
Length = 360
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/122 (45%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + SLE F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGSLENLFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>sp|P20268|HM06_CAEEL Homeobox protein ceh-6 OS=Caenorhabditis elegans GN=ceh-6 PE=2 SV=3
Length = 380
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 17 GVTQADVGKALANLKLPGVGALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAKN 76
G TQADVG AL L SQ+TICRFE+L LS NM LKP+L WLEEA++ +
Sbjct: 210 GYTQADVGVALGTLY---GNIFSQTTICRFEALQLSFKNMCKLKPLLFKWLEEADSTTGS 266
Query: 77 KRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNVV 136
+ + AG K++KRTSI K LE +F +P+ ++I +A +L L+K VV
Sbjct: 267 PNSTFEKMTGQ-AGRKRKKRTSIEVNVKSRLEFHFQSNQKPNAQEITQVAMELQLEKEVV 325
Query: 137 R 137
R
Sbjct: 326 R 326
>sp|Q9TSV5|PO5F1_PIG POU domain, class 5, transcription factor 1 OS=Sus scrofa GN=POU5F1
PE=1 SV=1
Length = 360
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
>sp|O97552|PO5F1_BOVIN POU domain, class 5, transcription factor 1 OS=Bos taurus GN=POU5F1
PE=2 SV=1
Length = 360
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Query: 17 GVTQADVGKALANLKLPGVG-ALSQSTICRFESLTLSHNNMIALKPILQAWLEEAEAQAK 75
G TQADVG L L G SQ+TICRFE+L LS NM L+P+LQ W+EEA+ +
Sbjct: 161 GYTQADVGLTLGVL----FGKVFSQTTICRFEALQLSFKNMCKLRPLLQKWVEEAD-NNE 215
Query: 76 NKRRDPDAPSVLPAGEKKRKRTSIAAPEKRSLEAYFAVQPRPSGEKIAAIAEKLDLKKNV 135
N + A +++ A +KRKRTSI + +LE+ F P+P+ ++I+ IA++L L+K+V
Sbjct: 216 NLQEICKAETLVQA--RKRKRTSIENRVRGNLESMFLQCPKPTLQQISHIAQQLGLEKDV 273
Query: 136 VR 137
VR
Sbjct: 274 VR 275
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,408,623
Number of Sequences: 539616
Number of extensions: 1952697
Number of successful extensions: 6479
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 6211
Number of HSP's gapped (non-prelim): 161
length of query: 145
length of database: 191,569,459
effective HSP length: 106
effective length of query: 39
effective length of database: 134,370,163
effective search space: 5240436357
effective search space used: 5240436357
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)