BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy179
(359 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6DH69|FAH2A_DANRE Fatty-acid amide hydrolase 2-A OS=Danio rerio GN=faah2a PE=2 SV=1
Length = 532
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 181 LKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLPV 240
L+E+LGTDGVL+YP+ P AQ+H + T Y + N++G P T PLGL + GLP+
Sbjct: 435 LEELLGTDGVLLYPSHPLIAQKHHHPIFTPFNFSYTGIFNILGLPVTQCPLGLSAEGLPL 494
Query: 241 GLQVC 245
G+Q+
Sbjct: 495 GVQIV 499
Score = 35.0 bits (79), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 19/32 (59%)
Query: 320 KVMAGPNQDRLCLAVAKKLEDIFYGWTMPNST 351
+++AG QDRL LA A LE F GW P T
Sbjct: 497 QIVAGKLQDRLSLATALYLEKAFGGWREPGKT 528
>sp|Q05AM4|FAH2B_DANRE Fatty-acid amide hydrolase 2-B OS=Danio rerio GN=faah2b PE=2 SV=1
Length = 526
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%)
Query: 181 LKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLPV 240
++++LGTDGVL+YP+ P A +H L Y + N++G P T PLGL LP+
Sbjct: 433 MEDLLGTDGVLLYPSHPLLAPKHHHPLFMPFNFSYTGILNILGLPVTQCPLGLSKERLPL 492
Query: 241 GLQV 244
G+QV
Sbjct: 493 GVQV 496
>sp|Q7XJJ7|FAAH_ARATH Fatty acid amide hydrolase OS=Arabidopsis thaliana GN=FAAH PE=1
SV=1
Length = 607
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 13/153 (8%)
Query: 103 HNGGSRLVQCNVQCMQMLCTLHCTSLDPPLHVKSNLTNANVFHVSENFCTDTQLVMAYSR 162
+N G ++V+ V ++ + H S+ P S+LT + DT+ A R
Sbjct: 420 NNHGCKVVEIVVPELEEMRAAHVISIGSP--TLSSLTPYCEAGKNSKLSYDTRTSFAIFR 477
Query: 163 TW---DHL----LEKLMMD--LRVFFGLKEILGTDGVLIYPTFPAQAQRHGE--ILLTTS 211
++ D++ L + +M+ L +F + I+ + P P A ++GE I +TT
Sbjct: 478 SFSASDYIAAQCLRRRLMEYHLNIFKDVDVIVTPTTGMTAPVIPPDALKNGETNIQVTTD 537
Query: 212 GVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
+ + + AN++GFP+ +VP+G GLP+GLQ+
Sbjct: 538 LMRFVLAANLLGFPAISVPVGYDKEGLPIGLQI 570
>sp|Q6GMR7|FAAH2_HUMAN Fatty-acid amide hydrolase 2 OS=Homo sapiens GN=FAAH2 PE=2 SV=1
Length = 532
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 181 LKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLPV 240
L ++LG DGV +YP+ P A +H L Y + + +G P T PLGL + GLP+
Sbjct: 439 LVDMLGDDGVFLYPSHPTVAPKHHVPLTRPFNFAYTGVFSALGLPVTQCPLGLNAKGLPL 498
Query: 241 GLQV 244
G+QV
Sbjct: 499 GIQV 502
Score = 35.4 bits (80), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 320 KVMAGPNQDRLCLAVAKKLEDIFYGWTMPNS 350
+V+AGP D L LAVA+ LE F GW P
Sbjct: 501 QVVAGPFNDHLTLAVAQYLEKTFGGWVCPGK 531
>sp|Q6FDY3|GATA_ACIAD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Acinetobacter sp.
(strain ADP1) GN=gatA PE=3 SV=1
Length = 492
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 190 VLIYPTFPAQAQRHGEILLTTS---GVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V+ P+ P A + G L G Y + N+ G P+ N P+GL SN LPVGLQ+
Sbjct: 400 VIAAPSAPTTAYKIGADLTPVEMYLGDIYTLAVNLAGLPAINAPVGLDSNNLPVGLQL 457
>sp|Q8DK65|GATA_THEEB Glutamyl-tRNA(Gln) amidotransferase subunit A
OS=Thermosynechococcus elongatus (strain BP-1) GN=gatA
PE=3 SV=2
Length = 482
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGLQV 244
VLI PT P A + GE +Y + L N+ G P +VP G SNGLP+GLQ+
Sbjct: 394 VLICPTAPTTAFKAGEKTADPLSMYLSDLMTIPVNLAGLPGLSVPCGFDSNGLPIGLQL 452
>sp|B8D125|GATA_HALOH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Halothermothrix
orenii (strain H 168 / OCM 544 / DSM 9562) GN=gatA PE=3
SV=1
Length = 477
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 190 VLIYPTFPAQAQRHGEI---LLTTSGVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
VLI PT P A + GE+ L + + N+ G P+ +VP G SN LP+GLQ+
Sbjct: 390 VLISPTTPTTAFKLGEMTDPLEMYQSDVFTVPVNIAGIPAISVPCGFDSNNLPIGLQI 447
>sp|B7GTU6|GATA_BIFLS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium
longum subsp. infantis (strain ATCC 15697 / DSM 20088 /
JCM 1222 / NCTC 11817 / S12) GN=gatA PE=3 SV=1
Length = 513
Score = 41.6 bits (96), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYY----AMLANVIGFPSTNVPLGLGSNGLPVGLQ 243
VLI PT P+ A + GE + +Y + AN+ G P+ ++P GL +GLPVG Q
Sbjct: 412 VLISPTSPSTAFKFGEKMDDPLAMYVNDIATIPANLAGMPAMSIPAGLSDDGLPVGFQ 469
>sp|C0Z4E4|GATA_BREBN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Brevibacillus
brevis (strain 47 / JCM 6285 / NBRC 100599) GN=gatA PE=3
SV=1
Length = 490
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGLQVC 245
V+++PT P+ A + GE + +Y + N+ G P+ +VP G NGLP+GLQ+
Sbjct: 399 VILHPTTPSTAFKVGENVDDPVKMYLEDICTVPVNLAGLPAISVPCGFSKNGLPIGLQIV 458
Query: 246 ETA 248
A
Sbjct: 459 GRA 461
>sp|B8I601|GATA_CLOCE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=gatA PE=3 SV=1
Length = 486
Score = 41.2 bits (95), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 170 KLMMDLRVFF--GLKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIG 223
K + LR G E V+++PT P A + G+ + +Y Y + N+ G
Sbjct: 376 KKALKLRTLISNGFNEAFTKYDVVLHPTTPETAFKIGQNSNSPLAMYLADIYTVAVNIAG 435
Query: 224 FPSTNVPLGLGSNGLPVGLQ 243
PS ++P G SNGLP+GL
Sbjct: 436 LPSISLPCGYDSNGLPIGLS 455
>sp|Q1QDJ4|GATA_PSYCK Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter
cryohalolentis (strain K5) GN=gatA PE=3 SV=1
Length = 498
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 190 VLIYPTFPAQAQRHGEILLTTS---GVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V+ PT P A + GE L + G Y + N+ G P+ + P+GL S GLP+GLQ+
Sbjct: 406 VIASPTAPTAAYKLGEDLDPATMYLGDVYTIGVNLAGLPALSQPVGLTSAGLPIGLQL 463
>sp|Q4FUG4|GATA_PSYA2 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Psychrobacter
arcticus (strain DSM 17307 / 273-4) GN=gatA PE=3 SV=1
Length = 498
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 190 VLIYPTFPAQAQRHGEILLTTS---GVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V+ PT P A + GE L + G Y + N+ G P+ + P+GL S GLP+GLQ+
Sbjct: 406 VIASPTAPTAAYKLGEDLDPATMYLGDVYTIGVNLAGLPALSQPVGLTSAGLPIGLQL 463
>sp|Q0I9N6|GATA_SYNS3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain CC9311) GN=gatA PE=3 SV=1
Length = 487
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 10/92 (10%)
Query: 157 VMAYSRTWDHLLEKLMMDLRVFFGLKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYA 216
V AY R + + D F + VL+ PT P+ A G +Y A
Sbjct: 367 VDAYYRKAQQVRTLIRRDFETAFASVD------VLLTPTAPSTAFAAGAHADDPLAMYLA 420
Query: 217 ML----ANVIGFPSTNVPLGLGSNGLPVGLQV 244
L AN+ G P+ NVP G S GLP+G+Q+
Sbjct: 421 DLLTIPANLAGLPAINVPCGFDSEGLPIGVQL 452
>sp|Q2G4F5|GATA_NOVAD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Novosphingobium
aromaticivorans (strain DSM 12444) GN=gatA PE=3 SV=1
Length = 494
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
V++ PT P+ A GE +Y +++ A++ G P+ +VP GL NGLP+GLQV
Sbjct: 405 VILAPTAPSSAFALGEKSADPLEMYLNDVFSVPASLAGLPAMSVPAGLDRNGLPLGLQVI 464
Query: 246 ETASVAQCV 254
A Q V
Sbjct: 465 GRAFDEQGV 473
>sp|Q8G768|GATA_BIFLO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium
longum (strain NCC 2705) GN=gatA PE=3 SV=1
Length = 513
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQ 243
VL+ PT P+ A + GE + +Y + AN+ G P+ ++P GL +GLPVG Q
Sbjct: 412 VLVAPTSPSTAFKFGEKMDDPLAMYMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQ 469
>sp|B3DU32|GATA_BIFLD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Bifidobacterium
longum (strain DJO10A) GN=gatA PE=3 SV=1
Length = 513
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQ 243
VL+ PT P+ A + GE + +Y + AN+ G P+ ++P GL +GLPVG Q
Sbjct: 412 VLVAPTSPSTAFKFGEKMDDPLAMYMNDIATIPANLAGVPAMSIPAGLSDDGLPVGFQ 469
>sp|B6IN23|GATA_RHOCS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Rhodospirillum
centenum (strain ATCC 51521 / SW) GN=gatA PE=3 SV=1
Length = 521
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
V++ PT P A GE + +Y + + AN+ G P +VP GL +NGLP+GLQ+
Sbjct: 432 VILTPTAPNTAFGIGEKMDDPIAMYLNDVFTVPANLAGLPGLSVPAGLAANGLPLGLQLV 491
>sp|Q0BTK2|GATA_GRABC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Granulibacter
bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=gatA
PE=3 SV=1
Length = 499
Score = 40.4 bits (93), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
L+ PT P+ A GE + +Y + + N+ G P+ ++P GL + GLP+GLQ+
Sbjct: 403 ALLTPTAPSAAFAQGETIDDPVAMYLNDVFTVPINLAGLPAMSIPAGLSTTGLPLGLQII 462
Query: 246 ETA-------SVAQCVTSFVANEHSPLI 266
A +V+ + A H P +
Sbjct: 463 GRAFDEETVFAVSAALEQAAAFTHRPAL 490
>sp|A6W7L7|GATA_KINRD Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Kineococcus
radiotolerans (strain ATCC BAA-149 / DSM 14245 /
SRS30216) GN=gatA PE=3 SV=1
Length = 516
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 185 LGTDGVLIYPTFPAQAQRHGEILLTTSGVYYA----MLANVIGFPSTNVPLGLGSNGLPV 240
G+ VL+ PT P A R GE L +Y + AN+ G P ++P GL S GLPV
Sbjct: 413 FGSVDVLVSPTAPTVAYRLGEKLDDPLAMYAGDVATIPANLAGIPGMSLPCGL-SEGLPV 471
Query: 241 GLQV 244
GLQV
Sbjct: 472 GLQV 475
>sp|C4ZHB9|GATA_EUBR3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Eubacterium
rectale (strain ATCC 33656 / VPI 0990) GN=gatA PE=3 SV=1
Length = 503
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V++ P P A + GE L +Y Y + N+ G P ++P G+ NGLP+GLQ+
Sbjct: 398 VILGPAAPTTAPKLGESLSDPIQMYLGDIYTISVNLAGLPGISLPCGMDKNGLPIGLQL 456
>sp|Q9X0Z9|GATA_THEMA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermotoga
maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM
10099) GN=gatA PE=1 SV=1
Length = 475
Score = 40.0 bits (92), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 181 LKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAM-----LANVIGFPSTNVPLGLGS 235
L E+L ++ PT P A + GEI + YY M AN+ G P+ +VP G S
Sbjct: 374 LNEVLSQYDAILTPTSPVTAFKIGEIKDPLT--YYLMDIFTIPANLAGLPAISVPFGF-S 430
Query: 236 NGLPVGLQVC 245
N LPVG+QV
Sbjct: 431 NNLPVGVQVI 440
>sp|A2BQY7|GATA_PROMS Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain AS9601) GN=gatA PE=3 SV=1
Length = 482
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 136 SNLTNANVFHVSENFCTDTQ---------LVMAYSRTWDHLLEKLMMDLRVFF--GLKEI 184
SNL + +E F + Q L YS + +K+ +R F K++
Sbjct: 333 SNLIDMTSKSRAEGFGDEVQRRILIGTYALSAGYSDAYYKKAQKVRTLIRKDFDNAFKKV 392
Query: 185 LGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPV 240
VL+ PT P A G+ + +Y + L AN+ G P+ ++P G + GLP+
Sbjct: 393 ----DVLLTPTCPTTAFLKGDFVNDPLSMYLSDLLTVPANLAGLPAISIPCGFDTKGLPI 448
Query: 241 GLQV 244
GLQ+
Sbjct: 449 GLQL 452
>sp|Q73Q68|GATA_TREDE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Treponema
denticola (strain ATCC 35405 / CIP 103919 / DSM 14222)
GN=gatA PE=3 SV=1
Length = 485
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 157 VMAYSRTWDHLLEKLMMDLRVFFGLKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVY-- 214
V++ + D + L + ++ G+ E+L +I PT PA A + E + +Y
Sbjct: 372 VLSKEFSGDCYEKSLNVRAKIAQGVNEVLQKYDFIICPTAPAPAFKLNEKVDDPIAMYLS 431
Query: 215 --YAMLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
+ N+ PS +VP G GLPVG+Q C
Sbjct: 432 DLFTTFVNLARIPSLSVPAGKTKAGLPVGIQFC 464
>sp|B2A5W7|GATA_NATTJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Natranaerobius
thermophilus (strain ATCC BAA-1301 / DSM 18059 /
JW/NM-WN-LF) GN=gatA PE=3 SV=1
Length = 491
Score = 39.7 bits (91), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGLQVC 245
VLI PT P R GE + +Y + N+ G PS ++P G SNGLPVGLQV
Sbjct: 396 VLIAPTTPTVPFREGENVDDPLTMYKNDICTAPVNLAGLPSISIPCGF-SNGLPVGLQVI 454
Query: 246 ETA 248
A
Sbjct: 455 GKA 457
>sp|B2U7V7|GATA_RALPJ Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia
pickettii (strain 12J) GN=gatA PE=3 SV=1
Length = 499
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYA----MLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
V++ P P A + GE +Y A + ++ G P +VP G G+NGLPVGLQ+
Sbjct: 411 VIMGPVAPTVAWKLGEKTSDPVQMYLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQII 470
Query: 246 ----ETASVAQCVTSF 257
E A + Q +F
Sbjct: 471 GNYFEEARMLQIAHAF 486
>sp|B0K3S3|GATA_THEPX Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter
sp. (strain X514) GN=gatA PE=3 SV=1
Length = 488
Score = 39.7 bits (91), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V+I PT P A + GE +Y Y + N+ G P ++P GL S+GLPVGLQ+
Sbjct: 397 VIIGPTSPTVAFKIGERANDPLAMYLADIYTVSVNIAGLPGISIPCGL-SDGLPVGLQI 454
>sp|B0SRP1|GATA_LEPBP Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira biflexa
serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris)
GN=gatA PE=3 SV=1
Length = 488
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 183 EILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGL 238
E T V++ PT P A + GE +Y A + N+ G P+ + P GL NGL
Sbjct: 391 EFFKTVDVILQPTSPTTAFKVGEKTKDPIQMYQADILTTSVNLAGVPAISCPAGLDQNGL 450
Query: 239 PVGLQV 244
P+G+Q+
Sbjct: 451 PIGVQL 456
>sp|B0S8V3|GATA_LEPBA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira biflexa
serovar Patoc (strain Patoc 1 / Ames) GN=gatA PE=3 SV=1
Length = 488
Score = 39.7 bits (91), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 183 EILGTDGVLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGL 238
E T V++ PT P A + GE +Y A + N+ G P+ + P GL NGL
Sbjct: 391 EFFKTVDVILQPTSPTTAFKVGEKTKDPIQMYQADILTTSVNLAGVPAISCPAGLDQNGL 450
Query: 239 PVGLQV 244
P+G+Q+
Sbjct: 451 PIGVQL 456
>sp|B0KBN4|GATA_THEP3 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter
pseudethanolicus (strain ATCC 33223 / 39E) GN=gatA PE=3
SV=1
Length = 488
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V+I PT P A + GE +Y Y + N+ G P ++P GL S+GLPVGLQ+
Sbjct: 397 VIIGPTSPTVAFKIGERANDPLAMYLADIYTVSVNIAGLPGISIPCGL-SDGLPVGLQI 454
>sp|Q3SM39|GATA_THIDA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thiobacillus
denitrificans (strain ATCC 25259) GN=gatA PE=3 SV=1
Length = 485
Score = 39.3 bits (90), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 181 LKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSN 236
E T V++ PT P A + GE +Y Y + AN+ G P ++P G S
Sbjct: 386 FAEAFKTCDVILGPTAPGTAFKLGEKSDDPVEMYLNDLYTIPANLAGLPGMSLPCGFDSQ 445
Query: 237 GLPVGLQV 244
GLP+GLQ+
Sbjct: 446 GLPIGLQL 453
>sp|A5GKM7|GATA_SYNPW Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Synechococcus sp.
(strain WH7803) GN=gatA PE=3 SV=1
Length = 487
Score = 39.3 bits (90), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGLQV 244
VL+ PT P A R+G +Y + L AN+ G P+ +VP G + GLP+G+Q+
Sbjct: 394 VLLTPTAPGTAFRNGAHADDPLAMYLSDLLTIPANLAGLPAISVPCGFDTGGLPIGVQL 452
>sp|A2BWS5|GATA_PROM5 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain MIT 9515) GN=gatA PE=3 SV=1
Length = 484
Score = 39.3 bits (90), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGLQV 244
VL+ PT P A G+ + +Y + L AN+ G P+ ++P G GLP+GLQ+
Sbjct: 394 VLLTPTCPTTAFLKGDFINDPLSMYLSDLLTVPANLAGLPAISIPCGFDKKGLPIGLQL 452
>sp|Q8Y3C3|GATA_RALSO Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Ralstonia
solanacearum (strain GMI1000) GN=gatA PE=3 SV=1
Length = 495
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYA----MLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
V++ P P A + GE +Y A + ++ G P +VP G G+NGLPVGLQ+
Sbjct: 407 VIMGPVAPTVAWKLGEKTDDPLQMYLADIFTLSTSLAGLPGMSVPAGFGANGLPVGLQII 466
Query: 246 ----ETASVAQCVTSF 257
E A + Q +F
Sbjct: 467 GNYFEEARMLQIAHAF 482
>sp|P13397|NYLA_PSES8 6-aminohexanoate-cyclic-dimer hydrolase OS=Pseudomonas sp. (strain
NK87) GN=nylA PE=3 SV=2
Length = 493
Score = 38.9 bits (89), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 20/121 (16%)
Query: 174 DLRVFFGLKEILGTDG--VLIYPTFPAQAQRHGEILLTTS----GVYYAMLA-------- 219
+LR + G E G +LI PT Q GE++L G + A+++
Sbjct: 365 ELRYYAGKVERWWEAGWDLLILPTVTRQTPEIGELMLAKGTDLEGRHTALISGSLRMLAF 424
Query: 220 ----NVIGFPSTNVPLGLGSNGLPVGLQVCETASVAQCVTSFVANEHS--PLIPSTPQYL 273
NV G P+ ++P+G+ S+G+P+G+Q+ + A P + PQ L
Sbjct: 425 TVPFNVSGQPAISLPIGMSSDGMPIGVQIVAAYGREDLLLQVAAQLEGALPWVARRPQLL 484
Query: 274 D 274
+
Sbjct: 485 N 485
>sp|Q97FQ7|GATA1_CLOAB Glutamyl-tRNA(Gln) amidotransferase subunit A 1 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=gatA1 PE=3 SV=1
Length = 485
Score = 38.9 bits (89), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
+I PT P A R GE +Y Y + N+ G PS +VP G S GLPVGLQ+
Sbjct: 398 AIITPTTPTPAFRIGEKTKDVLSMYMSDIYTVPVNIAGIPSISVPCGFVS-GLPVGLQI 455
>sp|A3PCR0|GATA_PROM0 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain MIT 9301) GN=gatA PE=3 SV=1
Length = 482
Score = 38.9 bits (89), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 15/122 (12%)
Query: 136 SNLTNANVFHVSENFCTDTQ---------LVMAYSRTWDHLLEKLMMDLRVFFGLKEILG 186
SNL + +E F + Q L YS + +K+ +R F
Sbjct: 333 SNLIDMTSKSRAEGFGDEVQRRILIGTYALSAGYSDAYYKKAQKVRTLIRKDF--DNAFN 390
Query: 187 TDGVLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGL 242
VL+ PT P A G+ + +Y + L AN+ G P+ ++P G + GLP+G+
Sbjct: 391 KVDVLLTPTCPTTAFLKGDFVNDPLSMYLSDLLTVPANLAGLPAISIPCGFDTKGLPIGM 450
Query: 243 QV 244
Q+
Sbjct: 451 QL 452
>sp|Q5FWT5|GATA_RAT Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial
OS=Rattus norvegicus GN=Qrsl1 PE=2 SV=1
Length = 525
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 134 VKSNLTNANVFHVSENFCTDTQLVMAYSRTWDHLLEKLMMDLRVFFGLKEILGTDGVLIY 193
VK + + N F + EN+ + V A + ++ D FG G D VL+
Sbjct: 370 VKGRILSGNFFLLKENY--ENYFVKA-----QKVRRLIVNDFVNVFGS----GVD-VLLT 417
Query: 194 PTFPAQAQRHGEIL------LTTSGVYYAMLANVIGFPSTNVPLGLGSNGLPVGLQVCET 247
PT QA + E + + + N+ G P+ NVP+ L S GLP+GLQ+
Sbjct: 418 PTTLTQAVPYLEFIKEDNRTRSAQDDIFTQAVNMAGLPAVNVPVALSSQGLPIGLQLIGR 477
Query: 248 A 248
A
Sbjct: 478 A 478
>sp|Q6AEE8|GATA_LEIXX Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leifsonia xyli
subsp. xyli (strain CTCB07) GN=gatA PE=3 SV=1
Length = 515
Score = 38.9 bits (89), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 5/64 (7%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYY----AMLANVIGFPSTNVPLGLG-SNGLPVGLQV 244
VL+ P+ P A R GE L +Y + AN+ G P +P+GL +GLPVGLQ+
Sbjct: 407 VLVSPSAPTTAFRFGEKLHDPMAMYLNDITTIPANLAGVPGMGLPIGLAPEDGLPVGLQL 466
Query: 245 CETA 248
A
Sbjct: 467 MAPA 470
>sp|Q31B32|GATA_PROM9 Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Prochlorococcus
marinus (strain MIT 9312) GN=gatA PE=3 SV=1
Length = 480
Score = 38.9 bits (89), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 53/122 (43%), Gaps = 15/122 (12%)
Query: 136 SNLTNANVFHVSENFCTDTQ---------LVMAYSRTWDHLLEKLMMDLRVFFGLKEILG 186
SNL + +E F + Q L YS + +K+ +R F K
Sbjct: 333 SNLIDMTSKSRAEGFGDEVQRRILIGTYALSAGYSDAYYKKAQKVRTLIRNDFD-KAFKK 391
Query: 187 TDGVLIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGL 242
D +L+ PT P A G+ +Y + L AN+ G P+ ++P G + GLP+GL
Sbjct: 392 VD-ILLTPTCPTTAFLKGDFSNDPLSMYLSDLLTVPANLAGLPAISIPCGFDTKGLPIGL 450
Query: 243 QV 244
Q+
Sbjct: 451 QL 452
>sp|Q8RC40|GATA_THETN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thermoanaerobacter
tengcongensis (strain DSM 15242 / JCM 11007 / NBRC
100824 / MB4) GN=gatA PE=3 SV=1
Length = 488
Score = 38.5 bits (88), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V++ PT P A + GE +Y Y + N+ G P+ ++P GL S GLPVGLQ+
Sbjct: 397 VIVGPTSPTVAFKIGERTNDPLAMYLADIYTVSVNIAGLPAISIPCGL-SEGLPVGLQI 454
>sp|Q1GUW3|GATA_SPHAL Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sphingopyxis
alaskensis (strain DSM 13593 / LMG 18877 / RB2256)
GN=gatA PE=3 SV=1
Length = 493
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 181 LKEILGTDGVLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSN 236
+ G+ V++ PT P+ A GE + +Y +A+ A++ G P+ +VP L
Sbjct: 395 FEAAFGSCDVILAPTAPSAAFGLGEKMADPLAMYLNDVFAVPASLAGLPAMSVPAALNRE 454
Query: 237 GLPVGLQV 244
GLP+GLQ+
Sbjct: 455 GLPLGLQI 462
>sp|B8GL95|GATA_THISH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Thioalkalivibrio
sp. (strain HL-EbGR7) GN=gatA PE=3 SV=1
Length = 484
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQV 244
V++ PT P+ A R GE +Y Y + N+ G P ++P G S+GLPVGLQ+
Sbjct: 395 VILGPTSPSTAFRLGEKTDDPVTMYLSDIYTIAVNLAGLPGMSIPAGF-SDGLPVGLQL 452
>sp|P63490|AMIA2_MYCTU Putative amidase AmiA2 OS=Mycobacterium tuberculosis GN=amiA2 PE=3
SV=1
Length = 484
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 220 NVIGFPSTNVPLGLGSNGLPVGLQVCETASVAQCVTSFVAN 260
N++G+PS NVP G S+GLP+G+Q+ A+ + S A
Sbjct: 426 NLLGWPSINVPAGFTSDGLPIGVQLMGPANSEGMLISLAAE 466
>sp|P63491|AMIA2_MYCBO Putative amidase AmiA2 OS=Mycobacterium bovis (strain ATCC BAA-935
/ AF2122/97) GN=amiA2 PE=3 SV=1
Length = 484
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 220 NVIGFPSTNVPLGLGSNGLPVGLQVCETASVAQCVTSFVAN 260
N++G+PS NVP G S+GLP+G+Q+ A+ + S A
Sbjct: 426 NLLGWPSINVPAGFTSDGLPIGVQLMGPANSEGMLISLAAE 466
>sp|Q30SH9|GATA_SULDN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Sulfurimonas
denitrificans (strain ATCC 33889 / DSM 1251) GN=gatA
PE=3 SV=1
Length = 447
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
+++ P P A + GE L T +Y Y + N+ G P+ +VP+ S G+P+GLQ+
Sbjct: 365 LILSPVAPTTANKFGE-LSTPMEMYLSDLYTISVNLAGLPAISVPISKSSEGMPIGLQLI 423
Query: 246 ETASVAQCV 254
A Q +
Sbjct: 424 ANAYDEQTL 432
>sp|Q1IUE4|GATA_KORVE Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Koribacter
versatilis (strain Ellin345) GN=gatA PE=3 SV=1
Length = 480
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVYYA----MLANVIGFPSTNVPLGLGSNGLPVGLQV 244
++ PT P A + GE +Y A + A+++G P +VP G +GLP+GLQV
Sbjct: 398 AIVTPTTPTPAFKLGEKADDPLAMYLADIFTVTADLVGIPGISVPCGSSKDGLPIGLQV 456
>sp|B4R968|GATA_PHEZH Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Phenylobacterium
zucineum (strain HLK1) GN=gatA PE=3 SV=1
Length = 490
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Query: 190 VLIYPTFPAQAQRHGEILLTTSGVY----YAMLANVIGFPSTNVPLGLGSNGLPVGLQVC 245
L+ PT P+ A GE +Y + + N+ G P +VP G+ +NGLP+GLQ+
Sbjct: 401 ALLTPTAPSAAFALGEKSDDPVAMYLNDIFTVTVNLAGLPGMSVPAGVDANGLPLGLQLI 460
Query: 246 ETA 248
A
Sbjct: 461 GKA 463
>sp|Q8F3A1|GATA_LEPIN Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=gatA PE=3 SV=1
Length = 487
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 191 LIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGLQV 244
++ PT P A + GE +Y A + N+ G P+ +VP+G GLP+GLQ+
Sbjct: 398 ILQPTSPTTAFKIGEKTKDPIQMYKADIWTTSVNLAGLPAMSVPMGADQKGLPIGLQI 455
>sp|Q72SC3|GATA_LEPIC Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=gatA PE=3 SV=1
Length = 487
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 191 LIYPTFPAQAQRHGEILLTTSGVYYAML----ANVIGFPSTNVPLGLGSNGLPVGLQV 244
++ PT P A + GE +Y A + N+ G P+ +VP+G GLP+GLQ+
Sbjct: 398 ILQPTSPTTAFKIGEKTKDPIQMYKADIWTTSVNLAGLPAMSVPMGADQKGLPIGLQI 455
>sp|Q0BZV5|GATA_HYPNA Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Hyphomonas
neptunium (strain ATCC 15444) GN=gatA PE=3 SV=1
Length = 490
Score = 37.7 bits (86), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 215 YAMLANVIGFPSTNVPLGLGSNGLPVGLQVCETA 248
+ + AN+ G P +VP GL ++GLP+GLQV A
Sbjct: 430 FTVTANLAGLPGISVPAGLSASGLPLGLQVIGKA 463
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,421,114
Number of Sequences: 539616
Number of extensions: 5447665
Number of successful extensions: 11425
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 11200
Number of HSP's gapped (non-prelim): 356
length of query: 359
length of database: 191,569,459
effective HSP length: 119
effective length of query: 240
effective length of database: 127,355,155
effective search space: 30565237200
effective search space used: 30565237200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)