Query psy17901
Match_columns 218
No_of_seqs 187 out of 987
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 17:03:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17901.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17901hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mal_A Stromal cell-derived fa 100.0 8.4E-47 2.9E-51 321.6 14.7 148 7-155 11-197 (199)
2 1t9f_A Protein 1D10; structura 100.0 2.3E-45 7.9E-50 309.5 14.6 148 9-157 2-187 (187)
3 3mal_A Stromal cell-derived fa 99.9 4.8E-26 1.6E-30 193.7 10.0 97 9-111 75-175 (199)
4 3uj4_A Inositol 1,4,5-trisphos 99.9 1.1E-24 3.9E-29 210.9 8.1 103 7-113 169-271 (604)
5 1t9f_A Protein 1D10; structura 99.9 3.6E-24 1.2E-28 180.2 9.7 97 8-111 63-163 (187)
6 1n4k_A Inositol 1,4,5-trisphos 99.6 1.4E-16 4.7E-21 146.7 3.6 89 9-99 6-97 (381)
7 3uj4_A Inositol 1,4,5-trisphos 99.6 2.2E-15 7.6E-20 146.0 11.5 111 10-146 111-222 (604)
8 2xoa_A Ryanodine receptor 1; m 99.6 8.6E-15 2.9E-19 140.7 13.2 95 11-111 98-194 (559)
9 2xoa_A Ryanodine receptor 1; m 99.5 1E-14 3.6E-19 140.1 6.7 99 11-114 211-319 (559)
10 3im6_A Cardiac Ca2+ release ch 98.7 1.7E-07 5.9E-12 80.2 12.0 84 11-96 110-195 (217)
11 1xzz_A Inositol 1,4,5-trisphos 98.6 1.3E-07 4.3E-12 82.6 9.5 111 10-146 126-237 (246)
12 1n4k_A Inositol 1,4,5-trisphos 98.1 2.6E-06 8.8E-11 78.2 4.4 88 10-97 70-180 (381)
13 1xzz_A Inositol 1,4,5-trisphos 93.6 0.1 3.4E-06 45.2 5.7 54 9-66 186-239 (246)
14 1qql_A Fibroblast growth facto 71.8 6 0.0002 31.1 5.2 61 17-97 7-69 (140)
15 1bfg_A Basic fibroblast growth 66.6 11 0.00038 29.8 5.7 63 15-97 16-78 (146)
16 3pg0_A Threefoil; symmetric de 66.3 18 0.0006 27.7 6.8 66 16-96 25-90 (165)
17 3im6_A Cardiac Ca2+ release ch 64.3 10 0.00036 32.2 5.4 38 73-110 110-147 (217)
18 2fdb_M FGF8B, fibroblast growt 61.1 25 0.00085 28.3 6.9 61 17-96 26-89 (164)
19 3pg0_A Threefoil; symmetric de 60.3 37 0.0013 25.8 7.7 64 18-96 74-137 (165)
20 1nun_A Fibroblast growth facto 57.7 17 0.00059 28.6 5.3 57 20-96 14-72 (145)
21 1rg8_A Heparin-binding growth 56.2 33 0.0011 27.1 6.8 40 46-97 36-75 (146)
22 3nbc_A Ricin B-like lectin; la 51.9 23 0.00079 27.8 5.2 49 14-66 2-55 (148)
23 1jlx_A Agglutinin, amaranthin, 51.2 39 0.0013 30.0 7.0 44 56-99 73-127 (303)
24 3q7x_A De novo designed beta-t 49.0 67 0.0023 24.5 7.4 59 19-97 7-65 (132)
25 3ef2_A Agglutinin, lectin; bet 47.6 42 0.0014 29.4 6.7 65 19-96 7-74 (293)
26 1ijt_A FGF4, fibroblast growth 46.6 26 0.00088 26.9 4.6 49 28-97 15-63 (128)
27 3phz_A Ricin B-related lectin; 45.6 49 0.0017 29.1 6.7 63 16-94 56-118 (286)
28 3llp_A Fascin; beta-trefoil, a 45.2 77 0.0026 29.8 8.4 40 18-66 99-138 (493)
29 1q1u_A FGF-12, fibrobast growt 44.8 38 0.0013 26.5 5.5 61 16-97 9-69 (144)
30 2p39_A Fibroblast growth facto 41.6 67 0.0023 25.6 6.5 61 16-97 12-74 (155)
31 2p23_A FGF-19, fibroblast grow 37.6 46 0.0016 27.6 5.0 59 17-96 17-82 (194)
32 3iag_C Recombining binding pro 37.2 33 0.0011 31.9 4.4 70 12-93 153-233 (422)
33 3q7x_A De novo designed beta-t 36.1 1.1E+02 0.0039 23.2 6.8 65 11-96 42-106 (132)
34 2vse_A MTX holotoxin, mosquito 35.2 67 0.0023 32.2 6.7 52 13-66 311-364 (841)
35 1sr4_A CDT A, cytolethal diste 28.4 1.3E+02 0.0044 25.2 6.3 60 15-95 105-165 (206)
36 3vsf_A Ricin B lectin; GH43 CB 27.6 1.3E+02 0.0044 27.7 6.9 66 16-96 359-424 (526)
37 3laz_A D-galactarate dehydrata 27.0 28 0.00094 26.0 1.7 30 10-39 66-97 (99)
38 3cvb_A Plastocyanin; cupredoxi 27.0 33 0.0011 23.9 2.1 30 10-39 19-49 (105)
39 3p6i_A De novo designed beta-t 25.3 2.4E+02 0.0083 21.9 7.7 64 11-95 77-140 (142)
40 3ef2_A Agglutinin, lectin; bet 24.9 1.6E+02 0.0053 25.7 6.5 65 17-96 57-125 (293)
41 3brd_A LIN-12 and GLP-1 phenot 24.6 1.1E+02 0.0038 28.8 5.7 69 13-93 199-280 (477)
42 1ihk_A GLIA-activating factor; 23.8 89 0.003 25.3 4.4 50 27-96 36-85 (174)
43 2yug_A Protein FRG1; spliceoso 22.6 2.3E+02 0.0079 21.9 6.6 15 81-96 113-127 (155)
44 3llp_A Fascin; beta-trefoil, a 22.2 1.6E+02 0.0054 27.6 6.3 57 29-97 60-116 (493)
45 1pwa_A FGF-19, fibroblast grow 22.2 1E+02 0.0034 24.7 4.4 60 16-96 4-70 (162)
46 1plc_A Plastocyanin; electron 21.5 87 0.003 21.6 3.5 25 11-35 18-43 (99)
47 1f53_A Yeast killer toxin-like 21.4 1.2E+02 0.0042 21.8 4.2 35 29-67 11-47 (84)
48 1byp_A Protein (plastocyanin); 20.5 76 0.0026 21.8 3.0 26 11-36 18-44 (99)
49 2plt_A Plastocyanin; electron 20.4 77 0.0026 21.7 3.0 29 11-39 19-48 (98)
No 1
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=100.00 E-value=8.4e-47 Score=321.61 Aligned_cols=148 Identities=41% Similarity=0.655 Sum_probs=130.2
Q ss_pred ccCCCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEe
Q psy17901 7 KARNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTH 86 (218)
Q Consensus 7 ~~~~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H 86 (218)
.+.++..|+|||+|+|+|+.|++|||||.+.||.||+|||||||++.+|.||+|+|++..+..+..+++|.+||.|||+|
T Consensus 11 ~~~~~~~V~~Gs~VtL~h~~t~~~LHSH~~~yp~gS~qQqVT~y~~~~D~Nn~W~I~~~~~~~~~~~~~v~~gd~IRL~H 90 (199)
T 3mal_A 11 SGKEGVEITYGSAIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPGVVDSNSYWIVKPVPGTTEKQGDAVKSGATIRLQH 90 (199)
T ss_dssp -----CBCBTTCEEEEEETTTCCEEEEEEEECSSTTCCEEEEEECCSCCGGGCEEEECCTTSSCCTTSBCBTTCEEEEEE
T ss_pred cCCCCCEEeeCCEEEEEECCCCCcceeCCccCCCCCCCEEEEeeCCCCCCCCEEEEEecCcCCcCCCcEeecCCEEEEEE
Confidence 35788999999999999999999999999999999999999999988889999999988776667789999999999999
Q ss_pred cCCcceeeecCCCCCCCCCceeEEE---------------------------------------EecccccCCCCCCcee
Q psy17901 87 TTTNKNLHSHHFSSPLSGAQEVSAY---------------------------------------LSATRQTYGRPISGQY 127 (218)
Q Consensus 87 ~~T~~~LhSH~~~sPis~qqEVScY---------------------------------------L~~sg~~~~~~i~gQ~ 127 (218)
+.|++|||||++++|+|+++||||| |.+++..+|+|+|+|+
T Consensus 91 ~~T~~~LhSH~~~~P~s~~~EVs~~~~~~~~D~~d~W~Vei~~~~~~~~~~~~fRL~H~~T~~yL~sh~~~lp~wg~~Q~ 170 (199)
T 3mal_A 91 MKTRKWLHSHLHASPISGNLEVSCFGDDTNSDTGDHWKLIIEGSGKTWKQDQRVRLQHIDTSGYLHSHDKKYQRIAGGQQ 170 (199)
T ss_dssp TTTCCEEEEEEEECTTTCSEEEEEECBTTBCCGGGCEEEEESSSCCBCBTTCEEEEEETTTCCEEEEEEEECCSSSTTCE
T ss_pred CCCCCCEeECCcCCCCCCCeEEEEeccCCCCCCCCeEEEEEcCCCCEEEcCCeEEEEECCCCeEEeeCCCCCCCCCCcce
Confidence 9999999999999999999999994 4455567899999999
Q ss_pred EEEeecCCCCCCcceEEeeeeecCCCCc
Q psy17901 128 EIVTVSWPDHNPVLWKTMEGIFIHPSDP 155 (218)
Q Consensus 128 EV~c~~~~~d~~t~W~Veegv~~~~~~~ 155 (218)
||+|+...+ .+++|+||||+|+++++.
T Consensus 171 EV~~~~~~~-~~~~W~vee~~~~~~~~~ 197 (199)
T 3mal_A 171 EVCGIREKK-ADNIWLAAEGVYLPLNES 197 (199)
T ss_dssp EEEEESSCC-GGGCEEEEEEECCCCCC-
T ss_pred EEEeeCCCC-CCCeEEeCccccCCcccc
Confidence 999998654 455999999999998775
No 2
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=100.00 E-value=2.3e-45 Score=309.53 Aligned_cols=148 Identities=51% Similarity=0.828 Sum_probs=127.4
Q ss_pred CCCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecC
Q psy17901 9 RNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTT 88 (218)
Q Consensus 9 ~~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~ 88 (218)
+++..|+|||+|+|+|+.|++|||||.+.||.||+|||||||++.+|.||+|+|++.....+..+++|++||.|||+|+.
T Consensus 2 s~~~~V~~Gs~I~L~h~~t~~~LHSH~~~y~~gs~qQqVT~y~~~~D~nn~W~I~~~~~~~~~~~~~v~~Gd~IRL~H~~ 81 (187)
T 1t9f_A 2 SDEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALNAKCNRGDAIKCGDKIRLKHLT 81 (187)
T ss_dssp CTTCBCBTTCEEEEEETTTCCEEEEEEEECSSSSCCEEEEEESCSSCGGGCEEEEECTTCCCCTTCBCCTTCEEEEEETT
T ss_pred CCCCEEEeCCEEEEEECCCCcccEeCCccCCCCCCceEEEEECCCCCCCCEEEEEecCCCccCCCCEeccCCEEEEEECC
Confidence 46889999999999999999999999999999999999999998878999999999877667788999999999999999
Q ss_pred CcceeeecCCCCCCC-CCceeEE-------------------------------------EEecccccCCCCCCceeEEE
Q psy17901 89 TNKNLHSHHFSSPLS-GAQEVSA-------------------------------------YLSATRQTYGRPISGQYEIV 130 (218)
Q Consensus 89 T~~~LhSH~~~sPis-~qqEVSc-------------------------------------YL~~sg~~~~~~i~gQ~EV~ 130 (218)
|++|||||++++|++ +++|||| ||.+++..+|+|+|+|+||+
T Consensus 82 T~~~Lhsh~~~~p~s~~~~EVs~~g~~~~gd~~d~W~vei~~~~~~~~~~fRL~H~~tg~yL~~~~~~lp~w~~~Q~EV~ 161 (187)
T 1t9f_A 82 TGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVICNGDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQREVV 161 (187)
T ss_dssp TCCEEEEEEEECSSCTTSEEEEEECCTTTCCGGGCEEEECSSSSCBTTSEEEEEETTTCCEEEEEEEECCTTSTTCEEEE
T ss_pred CCCCEeECCcCCCCCCCceEEEEecccCCCCCCCeEEEEEcCCEEecCCeEEEEECCcCeEEecCCcccCCCCCCceEEE
Confidence 999999999999999 7899999 45556667899999999999
Q ss_pred eecCCCCCCcceEEeeeeecCCCCcch
Q psy17901 131 TVSWPDHNPVLWKTMEGIFIHPSDPVA 157 (218)
Q Consensus 131 c~~~~~d~~t~W~Veegv~~~~~~~~~ 157 (218)
|+++. +.+++|+||+|+|+++.++.+
T Consensus 162 ~~~~~-~~~~~W~vee~~~~~~~~~~~ 187 (187)
T 1t9f_A 162 GTDSI-TGGSAWKVAEGIYIKHQQKDL 187 (187)
T ss_dssp EESSC-CTTCCEEEECCC---------
T ss_pred EecCC-CCCCEEEECcccccCCCCCCC
Confidence 99876 455699999999999887653
No 3
>3mal_A Stromal cell-derived factor 2-like protein; trefoil fold, MIR motifs, unfolded protein response, putativ binding protein, plant protein; 1.95A {Arabidopsis thaliana} SCOP: b.42.6.0
Probab=99.93 E-value=4.8e-26 Score=193.66 Aligned_cols=97 Identities=29% Similarity=0.387 Sum_probs=87.3
Q ss_pred CCCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccC--CCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEe
Q psy17901 9 RNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVK--EDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTH 86 (218)
Q Consensus 9 ~~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~--~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H 86 (218)
..+.+|.+||+|||+|+.|++|||||++.||. ++|||||||+.. +|.||+|+|++... +..+..++.|||+|
T Consensus 75 ~~~~~v~~gd~IRL~H~~T~~~LhSH~~~~P~-s~~~EVs~~~~~~~~D~~d~W~Vei~~~-----~~~~~~~~~fRL~H 148 (199)
T 3mal_A 75 KQGDAVKSGATIRLQHMKTRKWLHSHLHASPI-SGNLEVSCFGDDTNSDTGDHWKLIIEGS-----GKTWKQDQRVRLQH 148 (199)
T ss_dssp CTTSBCBTTCEEEEEETTTCCEEEEEEEECTT-TCSEEEEEECBTTBCCGGGCEEEEESSS-----CCBCBTTCEEEEEE
T ss_pred CCCcEeecCCEEEEEECCCCCCEeECCcCCCC-CCCeEEEEeccCCCCCCCCeEEEEEcCC-----CCEEEcCCeEEEEE
Confidence 45678999999999999999999999999999 579999999875 78999999998652 45677899999999
Q ss_pred cCCcceeeecCCCCCCC--CCceeEEE
Q psy17901 87 TTTNKNLHSHHFSSPLS--GAQEVSAY 111 (218)
Q Consensus 87 ~~T~~~LhSH~~~sPis--~qqEVScY 111 (218)
+.|+|||++|+..+|-| +|+||+|+
T Consensus 149 ~~T~~yL~sh~~~lp~wg~~Q~EV~~~ 175 (199)
T 3mal_A 149 IDTSGYLHSHDKKYQRIAGGQQEVCGI 175 (199)
T ss_dssp TTTCCEEEEEEEECCSSSTTCEEEEEE
T ss_pred CCCCeEEeeCCCCCCCCCCcceEEEee
Confidence 99999999999999988 79999995
No 4
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=99.90 E-value=1.1e-24 Score=210.86 Aligned_cols=103 Identities=19% Similarity=0.203 Sum_probs=90.8
Q ss_pred ccCCCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEe
Q psy17901 7 KARNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTH 86 (218)
Q Consensus 7 ~~~~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H 86 (218)
++.+++.|+|||.|+|+|+.||+|||||.+.||.||+|||||+ .|.|+.|+|.+.....+..+.+|++||.|||.|
T Consensus 169 ~~~eGe~V~~Gd~V~L~~~~tg~~LHSh~~~yp~gS~qQqVt~----~D~Nn~W~I~~~~~~~~~~~~~Vk~GDvIRL~H 244 (604)
T 3uj4_A 169 LRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGANEVNS----VNANTSWKIVLFMKWSDNKDDILKGGDVVRLFH 244 (604)
T ss_dssp TSCTTSBCBTTCEEEEEESSSCSCEEEEEEECSSSTTCEEEEE----SSCCCEEEEEEEECGGGCCTTBCBTTCEEEEEE
T ss_pred cccCCCeEeeCCEEEEEEcCCCCcEEeecccCCCCCCceEEEE----EcCCCeEEEEecCCCCcccCcccccCCEEEEEE
Confidence 3567889999999999999999999999999999999999997 378889999976554445678999999999999
Q ss_pred cCCcceeeecCCCCCCCCCceeEEEEe
Q psy17901 87 TTTNKNLHSHHFSSPLSGAQEVSAYLS 113 (218)
Q Consensus 87 ~~T~~~LhSH~~~sPis~qqEVScYL~ 113 (218)
..|+++||||++++|.+.++|||||..
T Consensus 245 ~~T~~~LhSH~~~~P~~~~~eVs~yg~ 271 (604)
T 3uj4_A 245 AEQEKFLTADEHRKKQHVFLRTTGRQS 271 (604)
T ss_dssp TTTTEEEEEEEETTEEEEEEECCC--C
T ss_pred CCCCCCeecCCCCCCCcceEEEeeccc
Confidence 999999999999999887889999864
No 5
>1t9f_A Protein 1D10; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Caenorhabditis elegans} SCOP: b.42.6.1
Probab=99.90 E-value=3.6e-24 Score=180.19 Aligned_cols=97 Identities=19% Similarity=0.282 Sum_probs=86.7
Q ss_pred cCCCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccC--CCCCCceEEEcCCCCCCCCCCeeeeCCEEEEE
Q psy17901 8 ARNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVK--EDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLT 85 (218)
Q Consensus 8 ~~~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~--~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~ 85 (218)
+..+.+|.+||+|||+|+.|+.|||||++.+|...++||||||+.. +|.+|+|+|++.. ..++.++.|||+
T Consensus 63 ~~~~~~v~~Gd~IRL~H~~T~~~Lhsh~~~~p~s~~~~EVs~~g~~~~gd~~d~W~vei~~-------~~~~~~~~fRL~ 135 (187)
T 1t9f_A 63 CNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVICNG-------DEWLESEQFKLR 135 (187)
T ss_dssp CCTTCBCCTTCEEEEEETTTCCEEEEEEEECSSCTTSEEEEEECCTTTCCGGGCEEEECSS-------SSCBTTSEEEEE
T ss_pred cCCCCEeccCCEEEEEECCCCCCEeECCcCCCCCCCceEEEEecccCCCCCCCeEEEEEcC-------CEEecCCeEEEE
Confidence 4557899999999999999999999999999987789999999863 6789999999852 356779999999
Q ss_pred ecCCcceeeecCCCCCCC--CCceeEEE
Q psy17901 86 HTTTNKNLHSHHFSSPLS--GAQEVSAY 111 (218)
Q Consensus 86 H~~T~~~LhSH~~~sPis--~qqEVScY 111 (218)
|+.|||||++|+.++|-| +|+||+|.
T Consensus 136 H~~tg~yL~~~~~~lp~w~~~Q~EV~~~ 163 (187)
T 1t9f_A 136 HAVTGSYLSLSGQQFGRPIHGQREVVGT 163 (187)
T ss_dssp ETTTCCEEEEEEEECCTTSTTCEEEEEE
T ss_pred ECCcCeEEecCCcccCCCCCCceEEEEe
Confidence 999999999999988887 79999995
No 6
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=99.61 E-value=1.4e-16 Score=146.67 Aligned_cols=89 Identities=17% Similarity=0.224 Sum_probs=56.2
Q ss_pred CCCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEcc---CCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEE
Q psy17901 9 RNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEV---KEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLT 85 (218)
Q Consensus 9 ~~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~---~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~ 85 (218)
....+|++||+|||.|..|+.+||||.+..+. .-.++||||+. .+|+|++|+|+++.. .+..|.+|++|+.|||+
T Consensus 6 ~~~~~v~~GdvIRL~H~~t~~~Lhs~~~~~~~-~v~~~~s~~~s~~~~~d~~s~W~IE~~~~-~~~~G~~~~~~~~fRLr 83 (381)
T 1n4k_A 6 NKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQ-HVFLRTTGRQSATSATSSKALWEVEVVQH-DPCRGGAGYWNSLFRFK 83 (381)
T ss_dssp -------CCCEEEEEETTTTEEEEEEECSSSE-EEEEECCCSSSGGGCCCGGGCEEEEECC--------------CEEEE
T ss_pred ccCCcccCCcEEEEEEcccCCeeecCCCCCcc-ceeeeccCccCCCCCCCCCCeEEEEEecc-CCCCCCceeeCCeEEEE
Confidence 35678999999999999999999999877532 22345666553 368899999999853 23467789999999999
Q ss_pred ecCCcceeeecCCC
Q psy17901 86 HTTTNKNLHSHHFS 99 (218)
Q Consensus 86 H~~T~~~LhSH~~~ 99 (218)
|+.|||||++|...
T Consensus 84 H~~Tg~yL~~~~~~ 97 (381)
T 1n4k_A 84 HLATGHYLAAEVDP 97 (381)
T ss_dssp ETTTCCEEEEEEC-
T ss_pred ECCCCceeeEEecC
Confidence 99999999999543
No 7
>3uj4_A Inositol 1,4,5-trisphosphate receptor type 1; APO-state, suppressor domain, binding core domain, signaling protein; 3.00A {Rattus norvegicus} PDB: 3uj0_A 3t8s_A*
Probab=99.61 E-value=2.2e-15 Score=145.98 Aligned_cols=111 Identities=17% Similarity=0.201 Sum_probs=93.4
Q ss_pred CCceeecCCEEEEEecCCCCceeccc-cCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecC
Q psy17901 10 NNQYVTCGSVVKLMNVDYRVRLHSHD-VKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTT 88 (218)
Q Consensus 10 ~~~~V~~Gs~IrL~H~~Tg~~LHSH~-~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~ 88 (218)
.+..|+||++|.|.|+.|+.||+++. .++..+++++.|++... ++.+++|.|.+... ....|++|.+||.|.|+|+.
T Consensus 111 ~g~~V~YGs~IqL~H~~S~kyL~~~~~~~a~~e~~~~~V~L~~~-~~e~s~F~I~P~~k-~~~eGe~V~~Gd~V~L~~~~ 188 (604)
T 3uj4_A 111 LGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEA-GNEGSWFYIQPFYK-LRSIGDSVVIGDKVVLNPVN 188 (604)
T ss_dssp TTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTCEEEEEESS-CCGGGCEEEEESST-TSCTTSBCBTTCEEEEEESS
T ss_pred cCCeEEeCCeEEEEEcccCcEEEEcCCCcccccCCceEEEEEec-CCCCeEEEEecCcc-cccCCCeEeeCCEEEEEEcC
Confidence 46799999999999999999999987 66777889999999974 45788999998754 45688899999999999999
Q ss_pred CcceeeecCCCCCCCCCceeEEEEecccccCCCCCCceeEEEeecCCCCCCcceEEee
Q psy17901 89 TNKNLHSHHFSSPLSGAQEVSAYLSATRQTYGRPISGQYEIVTVSWPDHNPVLWKTME 146 (218)
Q Consensus 89 T~~~LhSH~~~sPis~qqEVScYL~~sg~~~~~~i~gQ~EV~c~~~~~d~~t~W~Vee 146 (218)
||+|||||...+|. +.+|+||+|. |.+|.|.|+.
T Consensus 189 tg~~LHSh~~~yp~--------------------gS~qQqVt~~----D~Nn~W~I~~ 222 (604)
T 3uj4_A 189 AGQPLHASSHQLVD--------------------NPGANEVNSV----NANTSWKIVL 222 (604)
T ss_dssp SCSCEEEEEEECSS--------------------STTCEEEEES----SCCCEEEEEE
T ss_pred CCCcEEeecccCCC--------------------CCCceEEEEE----cCCCeEEEEe
Confidence 99999999877762 4578888872 4455899873
No 8
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=99.59 E-value=8.6e-15 Score=140.66 Aligned_cols=95 Identities=18% Similarity=0.245 Sum_probs=77.3
Q ss_pred CceeecCCEEEEEecCCCCceeccccCCCCC-CCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCC
Q psy17901 11 NQYVTCGSVVKLMNVDYRVRLHSHDVKYGTG-SGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTT 89 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~g-S~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T 89 (218)
..+|+||++|.|.|+.|+.|||++...+..+ ...+.||+.+..+|.|++|.|.+... .+..|++|.+||.|+|.|+.|
T Consensus 98 ~~~v~yG~~iqL~H~~S~~~L~~~~~~~s~~ek~a~~V~L~~~~~~~~s~f~I~p~~k-~r~~G~~V~~Gd~V~L~~~~t 176 (559)
T 2xoa_A 98 HRTLLYGHAILLRHAHSRMYLSCLTTSRSMTDKLAFDVGLQEDATGEACWWTMHPASK-QRSEGEKVRVGDDLILVSVSS 176 (559)
T ss_dssp CCBCBTTCEEEEEETTTCCEEEECSCCC----CCCEEEEEESSCCSSTTEEEEEESST-TSCTTSBCBTTCEEEEEETTT
T ss_pred CCcEEEeeEEEEeecccCeEEEEcCcCcccccccceEEEEEecCCCCCcEEEEEcCcc-ccCCCCccccCCEEEEEECCC
Confidence 5789999999999999999999988775332 23479999976678999999999874 678899999999999999999
Q ss_pred cceee-ecCCCCCCCCCceeEEE
Q psy17901 90 NKNLH-SHHFSSPLSGAQEVSAY 111 (218)
Q Consensus 90 ~~~Lh-SH~~~sPis~qqEVScY 111 (218)
++||| || .| +.+||+|+
T Consensus 177 ~~~LH~S~---~~--gs~eVt~~ 194 (559)
T 2xoa_A 177 ERYLHLST---AS--GELQVDAS 194 (559)
T ss_dssp CCEEEEEC---------CEEEEE
T ss_pred CCcccccC---CC--CCeEEEec
Confidence 99999 55 23 56799993
No 9
>2xoa_A Ryanodine receptor 1; metal transport, calcium channel, ION channel, membrane PROT malignant hyperthermia, cardiac arrhythmia; 2.50A {Oryctolagus cuniculus}
Probab=99.51 E-value=1e-14 Score=140.06 Aligned_cols=99 Identities=17% Similarity=0.197 Sum_probs=77.3
Q ss_pred CceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccC---CCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEec
Q psy17901 11 NQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVK---EDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHT 87 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~---~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~ 87 (218)
..+|++||+|||.|..|+.|||++.. .+..+++|++|+.. +|+|++|+||+.... ..|..+..++.|||+|+
T Consensus 211 ~~~l~~GDvIRL~H~~t~~~L~~~~~---~s~~~~ev~~y~~~~~~~d~~~~W~VE~v~~~--~~G~~~~~~~~fRLrH~ 285 (559)
T 2xoa_A 211 EGYVTGGHVLRLFHGHMDECLTISAA---DSDDQRRLVYYEGGAVCTHARSLWRLEPLRIS--WSGSHLRWGQPLRIRHV 285 (559)
T ss_dssp TTBCBTTCEEEEECC---CEEEECCT---TCTTTTCBEEEECGGGGGSGGGCEEEEESCST--TTTSBCCTTCCEEEEET
T ss_pred cccccCCCEEEEEecCCCceeeccCC---CcccceEEEeecCCCcCCCCCceEEEEEeccc--cCCCceEeCCeEEEEEC
Confidence 67899999999999999999996653 34568899999864 578999999998764 35677889999999999
Q ss_pred CCcceeeecCCC-------CCCCCCceeEEEEec
Q psy17901 88 TTNKNLHSHHFS-------SPLSGAQEVSAYLSA 114 (218)
Q Consensus 88 ~T~~~LhSH~~~-------sPis~qqEVScYL~~ 114 (218)
.|||||++|..+ +|.....+|.||...
T Consensus 286 ~TG~YL~~~~~~~~~~~~~~~~~~~~s~F~f~~~ 319 (559)
T 2xoa_A 286 TTGRYLALTEDQGLVVVDACKAHTKATSFCFRVS 319 (559)
T ss_dssp TTCCEEEEETTTEEEEECGGGCCHHHHCEEEESS
T ss_pred CcCCeeeEcCCCCcccccccccCCCccEEEEeec
Confidence 999999999863 334445677776553
No 10
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=98.69 E-value=1.7e-07 Score=80.22 Aligned_cols=84 Identities=14% Similarity=0.214 Sum_probs=62.9
Q ss_pred CceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEE--EccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecC
Q psy17901 11 NQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTG--TEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTT 88 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~--y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~ 88 (218)
...|.||.+|.|.|+.++.||.-+..... .+..-.|+. ..+.++...+|.|.|... ....|+.|.-||.|.|.++.
T Consensus 110 ~r~v~YGq~IQLlH~~SnkyLtv~~~~~s-ek~~lrv~LgL~d~~~se~swF~I~P~yK-~RseGd~V~~GD~ViL~sv~ 187 (217)
T 3im6_A 110 HRTLLYGHAILLRHSYSGMYLCCLSTSRS-STDKLAFDVGLQEDTTGEACWWTIHPASK-QRSEGEKVRVGDDLILVSMS 187 (217)
T ss_dssp CCBCBTTCEEEEEETTTCCEEEECSCC-------CCEEEEEESCCSSSTTEEEEEESSS-CCCTTCBCBTTCEEEEEETT
T ss_pred CceEEeccEEEeeecccCcEEEEcCCCcc-cccCcEEEEEeccCCCCcceEEEEEccEe-eccCCCceeeCCEEEEEECC
Confidence 46899999999999999999987765433 333445554 233445678999998753 23578999999999999999
Q ss_pred Ccceeeec
Q psy17901 89 TNKNLHSH 96 (218)
Q Consensus 89 T~~~LhSH 96 (218)
|+.|||.+
T Consensus 188 s~~yLH~S 195 (217)
T 3im6_A 188 SERYLHLS 195 (217)
T ss_dssp TCCEEEEE
T ss_pred CCceEEee
Confidence 99999965
No 11
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=98.62 E-value=1.3e-07 Score=82.59 Aligned_cols=111 Identities=17% Similarity=0.175 Sum_probs=82.0
Q ss_pred CCceeecCCEEEEEecCCCCceecccc-CCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecC
Q psy17901 10 NNQYVTCGSVVKLMNVDYRVRLHSHDV-KYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTT 88 (218)
Q Consensus 10 ~~~~V~~Gs~IrL~H~~Tg~~LHSH~~-~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~ 88 (218)
.+..|.||++|.|.|+.|+.||-.... ++-.-.....|+.... +..+.+|.|.|...- ...|++|..||.|.|.++.
T Consensus 126 ~g~~v~YG~~iqLlHv~S~kyLt~~~~~~a~~ek~a~~v~L~~~-~se~s~F~I~P~~k~-r~eGd~V~~gD~V~l~~~~ 203 (246)
T 1xzz_A 126 LGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEA-GNEGSWFYIQPFYKL-RSIGDSVVIGDKVVLNPVN 203 (246)
T ss_dssp TTCBCBTTCEEEEEETTTTEEEEEEEEEECSSSTTSEEEEEESS-CCGGGCEEEEESSTT-SCTTSBCBTTCEEEEEESS
T ss_pred CCCeEEeccEEEEEEcCCCcEEEEcCcCchhhcccceEEEEecC-CCCceEEEEeeceee-cccCCceEECCEEEEEECC
Confidence 367899999999999999999977553 3434456678888544 456679999987642 3578888889999999999
Q ss_pred CcceeeecCCCCCCCCCceeEEEEecccccCCCCCCceeEEEeecCCCCCCcceEEee
Q psy17901 89 TNKNLHSHHFSSPLSGAQEVSAYLSATRQTYGRPISGQYEIVTVSWPDHNPVLWKTME 146 (218)
Q Consensus 89 T~~~LhSH~~~sPis~qqEVScYL~~sg~~~~~~i~gQ~EV~c~~~~~d~~t~W~Vee 146 (218)
++.|||.+...+|. -.|-.||+|.. ..|.|.|.-
T Consensus 204 ~~~~Lh~S~~~l~d--------------------~~~~~eVn~~~----~~T~Wki~l 237 (246)
T 1xzz_A 204 AGQPLHASSHQLVD--------------------NPGCNEVNSVN----CNTSWKIVL 237 (246)
T ss_dssp SCSCEEEEEEECSS--------------------SSSCEEEEESS----CCCEEEEEE
T ss_pred CCCcccccccccCC--------------------CCCCcEEEeec----CCceeEEee
Confidence 99999965443331 23567888832 335899863
No 12
>1n4k_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3-binding core, calcium channel,protein- ligand complex, B-trefoil fold; HET: I3P; 2.20A {Mus musculus} SCOP: a.118.22.1 b.42.6.1
Probab=98.05 E-value=2.6e-06 Score=78.22 Aligned_cols=88 Identities=11% Similarity=0.019 Sum_probs=37.3
Q ss_pred CCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccC----------CCCCCceEEEcCCCCCC---------
Q psy17901 10 NNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVK----------EDVNSHWIIKAPTGKTC--------- 70 (218)
Q Consensus 10 ~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~----------~D~Nd~WiIe~~~~~~~--------- 70 (218)
.+..|.+|+.+||+|..||+|||||...-..+.......+++.. ++....|.+.+.....+
T Consensus 70 ~G~~~~~~~~fRLrH~~Tg~yL~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~f~l~~~~~~~d~~s~f~l~~ 149 (381)
T 1n4k_A 70 RGGAGYWNSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASRSRLRNAQEKMVYSLVSVPEGNDISSIFELDP 149 (381)
T ss_dssp ---------CEEEEETTTCCEEEEEEC-------------------------------CCEEEEEESCSCSGGGCEEEEC
T ss_pred CCCceeeCCeEEEEECCCCceeeEEecCcccccccccccccccccccccccccCCCcCceEEEEecCccCCchhhhccCc
Confidence 46688999999999999999999997653111111101000000 01133455544322110
Q ss_pred ----CCCCeeeeCCEEEEEecCCcceeeecC
Q psy17901 71 ----KRGEPIKCNDIIRLTHTTTNKNLHSHH 97 (218)
Q Consensus 71 ----~~~~~V~~gd~IRL~H~~T~~~LhSH~ 97 (218)
.....|..++-|||+|+.||.+||+..
T Consensus 150 ~~~~~~d~~v~~~Sy~rl~H~~t~~Wl~~~~ 180 (381)
T 1n4k_A 150 TTLRGGDSLVPRNSYVRLRHLCTNTWVHSTN 180 (381)
T ss_dssp --------------CBEEEEGGGTEEEEEEE
T ss_pred ccccccccccccCceEEEEEcccCceEEeec
Confidence 012245556677999999999999864
No 13
>1xzz_A Inositol 1,4,5-trisphosphate receptor type 1; IP3 receptor, IP3 receptor suppressor domain, calcium channe trefoil fold, membrane protein; 1.80A {Mus musculus} PDB: 3jrr_A
Probab=93.60 E-value=0.1 Score=45.18 Aligned_cols=54 Identities=22% Similarity=0.248 Sum_probs=42.2
Q ss_pred CCCceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCC
Q psy17901 9 RNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPT 66 (218)
Q Consensus 9 ~~~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~ 66 (218)
.+++.|.+||.|.|.++.++.|||+-...++.-.+-.||-+. ..+..|.|.+..
T Consensus 186 ~eGd~V~~gD~V~l~~~~~~~~Lh~S~~~l~d~~~~~eVn~~----~~~T~Wki~l~~ 239 (246)
T 1xzz_A 186 SIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSV----NCNTSWKIVLFL 239 (246)
T ss_dssp CTTSBCBTTCEEEEEESSSCSCEEEEEEECSSSSSCEEEEES----SCCCEEEEEEEE
T ss_pred ccCCceEECCEEEEEECCCCCcccccccccCCCCCCcEEEee----cCCceeEEeehh
Confidence 668899999999999999999999765666665566788653 245689998653
No 14
>1qql_A Fibroblast growth factor 7/1 chimera; beta-trefoil, hormone/growth factor complex; 2.30A {Rattus norvegicus} SCOP: b.42.1.1 PDB: 1qqk_A
Probab=71.83 E-value=6 Score=31.13 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=41.4
Q ss_pred CCEEEEEecCC--CCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceee
Q psy17901 17 GSVVKLMNVDY--RVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLH 94 (218)
Q Consensus 17 Gs~IrL~H~~T--g~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~Lh 94 (218)
|..+|+++..+ |.+|..+ |.| .|.|-...+|..+.|.|+. |..| .|+|+.+.|+.||-
T Consensus 7 G~~~R~~~LY~r~g~~L~I~----~dG----~V~Gt~~~~~~~s~l~~~s-----------v~~g-~V~I~gv~s~~YLc 66 (140)
T 1qql_A 7 GGDIRVRRLFCRTQWYLRID----KRG----KVKGTQEMRNSYNIMEIRT-----------VAVG-IVAIKGVESEYYLA 66 (140)
T ss_dssp --CEEEECCEETTTEEEEEC----TTC----CEEEESCTTCSTTCEEEEE-----------EETT-EEEEEETTTCCCCE
T ss_pred CceeEEEEEEecCCeEEEEC----CCC----eEEeecCCCCCceEEEEEe-----------ecCC-EEEEEEcccCcEEE
Confidence 55677777554 4566554 444 4777766656677888875 3345 99999999999997
Q ss_pred ecC
Q psy17901 95 SHH 97 (218)
Q Consensus 95 SH~ 97 (218)
...
T Consensus 67 mn~ 69 (140)
T 1qql_A 67 MNK 69 (140)
T ss_dssp ECT
T ss_pred EcC
Confidence 653
No 15
>1bfg_A Basic fibroblast growth factor; 1.60A {Homo sapiens} SCOP: b.42.1.1 PDB: 1iil_A 1ii4_A 1bas_A 1bla_A 1bld_A 1bfb_A* 1bfc_A* 4fgf_A 1fga_A 2fgf_A 1ev2_A 1cvs_A 1fq9_A* 1bff_A 2bfh_A
Probab=66.56 E-value=11 Score=29.80 Aligned_cols=63 Identities=17% Similarity=0.222 Sum_probs=41.3
Q ss_pred ecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceee
Q psy17901 15 TCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLH 94 (218)
Q Consensus 15 ~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~Lh 94 (218)
..+..++|-....|.+|..++ .| -|.|-...+|....|.|+.+ ..| .|+|+.+.|+.||-
T Consensus 16 ~~~r~~rLY~r~~g~~LqI~~----dG----~V~Gt~~~~~~~s~l~i~sv-----------~~G-~V~I~gv~s~~YLc 75 (146)
T 1bfg_A 16 HFKDPKRLYCKNGGFFLRIHP----DG----RVDGVREKSDPHIKLQLQAE-----------ERG-VVSIKGVSANRYLA 75 (146)
T ss_dssp ---CCEEEEETTTTEEEEECT----TS----CEEEECCTTCGGGCEEEEEC-----------STT-EEEEEETTTTEEEE
T ss_pred CcCccEEEEEcCCCEEEEECC----CC----eEEeecCCCCCceEEEEEec-----------cCC-EEEEEEcccCcEEE
Confidence 456667776544467777753 44 47776655556667888753 234 99999999999996
Q ss_pred ecC
Q psy17901 95 SHH 97 (218)
Q Consensus 95 SH~ 97 (218)
...
T Consensus 76 Mn~ 78 (146)
T 1bfg_A 76 MKE 78 (146)
T ss_dssp ECT
T ss_pred EcC
Confidence 653
No 16
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=66.31 E-value=18 Score=27.68 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=41.0
Q ss_pred cCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeee
Q psy17901 16 CGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHS 95 (218)
Q Consensus 16 ~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhS 95 (218)
.+...+|++..+|..|-....... ..-.|..|...+..|-.|.+.... +..++|++..++..|-.
T Consensus 25 ~~g~y~i~n~~sg~cLdv~~~~~~---~g~~v~~~~c~~~~~Q~W~~~~~~------------~g~y~i~~~~sg~cLdv 89 (165)
T 3pg0_A 25 GDGYYKLVARHSGKALDVENASTS---DGANVIQYSYSGGDNQQWRLVDLG------------DGYYKLVARHSGKALDV 89 (165)
T ss_dssp -CCEEEEEETTTCCEEEEGGGCCS---TTCBEEEECCCCCGGGCEEEEEEE------------TTEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCCEEEeCCCCCC---CCCEEEEECCCCCccceEEEEECC------------CCEEEEEECCCCCEEEe
Confidence 356789999999988865432212 223565565444456689887531 23667777777777764
Q ss_pred c
Q psy17901 96 H 96 (218)
Q Consensus 96 H 96 (218)
.
T Consensus 90 ~ 90 (165)
T 3pg0_A 90 E 90 (165)
T ss_dssp G
T ss_pred C
Confidence 3
No 17
>3im6_A Cardiac Ca2+ release channel; ryanodine receptor 2, calcium release channel, ION channel, arrhythmia, CPVT, ARVD2, ARVC2, disease mutation; 1.70A {Mus musculus} PDB: 3im5_A 3im7_A 3qr5_A 3ila_A 3hsm_A
Probab=64.30 E-value=10 Score=32.22 Aligned_cols=38 Identities=13% Similarity=0.079 Sum_probs=25.3
Q ss_pred CCeeeeCCEEEEEecCCcceeeecCCCCCCCCCceeEE
Q psy17901 73 GEPIKCNDIIRLTHTTTNKNLHSHHFSSPLSGAQEVSA 110 (218)
Q Consensus 73 ~~~V~~gd~IRL~H~~T~~~LhSH~~~sPis~qqEVSc 110 (218)
...|..|..|.|.|+.++.||..+...+......-|.-
T Consensus 110 ~r~v~YGq~IQLlH~~SnkyLtv~~~~~sek~~lrv~L 147 (217)
T 3im6_A 110 HRTLLYGHAILLRHSYSGMYLCCLSTSRSSTDKLAFDV 147 (217)
T ss_dssp CCBCBTTCEEEEEETTTCCEEEECSCC------CCEEE
T ss_pred CceEEeccEEEeeecccCcEEEEcCCCcccccCcEEEE
Confidence 36788999999999999999988765433334444443
No 18
>2fdb_M FGF8B, fibroblast growth factor 8 isoform B; beta-trefoil fold, immunoglobulin fold, hormone/growth factor/transferase complex; 2.28A {Homo sapiens} SCOP: b.42.1.1
Probab=61.12 E-value=25 Score=28.33 Aligned_cols=61 Identities=7% Similarity=0.082 Sum_probs=40.9
Q ss_pred CCEEEEEecCC---CCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCccee
Q psy17901 17 GSVVKLMNVDY---RVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNL 93 (218)
Q Consensus 17 Gs~IrL~H~~T---g~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~L 93 (218)
|..||+++..+ |.+|..+ |.| .|.|-...+|..+.|+|+. +..|..|+|+.+.|+.||
T Consensus 26 ~~~~R~~qLY~rt~g~~LqI~----~dG----~V~Gt~~~~~~~s~L~~~s-----------~~~g~~V~I~gv~s~~YL 86 (164)
T 2fdb_M 26 RRLIRTYQLYSRTSGKHVQVL----ANK----RINAMAEDGDPFAKLIVET-----------DTFGSRVRVRGAETGLYI 86 (164)
T ss_dssp CCCEEEEEEEETTTSSEEEEC----TTS----CEEEEECTTCGGGCEEEEE-----------EETTTEEEEEETTTCCEE
T ss_pred CCcceEEEEEEccCCeEEEEC----CCC----cEEeeccCCCcceEEEEEE-----------eccceEEEEEEeccCcEE
Confidence 44677777443 5577665 343 4777665555566787774 224568999999999999
Q ss_pred eec
Q psy17901 94 HSH 96 (218)
Q Consensus 94 hSH 96 (218)
-..
T Consensus 87 cMn 89 (164)
T 2fdb_M 87 CMN 89 (164)
T ss_dssp EEC
T ss_pred EEc
Confidence 665
No 19
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=60.35 E-value=37 Score=25.76 Aligned_cols=64 Identities=14% Similarity=0.154 Sum_probs=40.1
Q ss_pred CEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeeec
Q psy17901 18 SVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHSH 96 (218)
Q Consensus 18 s~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhSH 96 (218)
..++|++..+|..|-........ .-.|..+...+..|-.|.|.... +..++|++..++..|-..
T Consensus 74 g~y~i~~~~sg~cLdv~~~~~~~---G~~v~~~~c~~~~~Q~W~~~~~g------------~g~~~i~~~~sg~cLdv~ 137 (165)
T 3pg0_A 74 GYYKLVARHSGKALDVENASTSD---GANVIQYSYSGGDNQQWRLVDLG------------DGYYKLVARHSGKALDVE 137 (165)
T ss_dssp TEEEEEETTTCCEEEEGGGCCST---TCBEEEECCCCCGGGCEEEEECS------------SSCEEEEETTTCCEEEEG
T ss_pred CEEEEEECCCCCEEEeCCCCCCC---CCEEEEEcCCCCCccEEEEEECC------------CCEEEEEECCCCcEEEcC
Confidence 36788888888777654322222 23555555544466688887532 134788898888877543
No 20
>1nun_A Fibroblast growth factor-10; beta-trefoil fold, immunoglobulin-like domain, hormone/growth factor/membrane protein complex; HET: 15P; 2.90A {Homo sapiens} SCOP: b.42.1.1
Probab=57.69 E-value=17 Score=28.60 Aligned_cols=57 Identities=18% Similarity=0.198 Sum_probs=38.6
Q ss_pred EEEEecC--CCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeeec
Q psy17901 20 VKLMNVD--YRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHSH 96 (218)
Q Consensus 20 IrL~H~~--Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhSH 96 (218)
+|+++.. ||.+|..+ |.| .|.|-...+|..+.|.|.. |..| .|+|+.+.|+.||-..
T Consensus 14 ~R~~~LY~~~g~~LqI~----~dG----~V~Gt~~~~~~~s~l~~~s-----------v~~g-~V~I~gv~s~~YLcmn 72 (145)
T 1nun_A 14 VRWRKLFSFTKYFLKIE----KNG----KVSGTKKENCPYSILEITS-----------VEIG-VVAVKAINSNYYLAMN 72 (145)
T ss_dssp SEEEEEEETTSCEEEEC----TTS----CEEEECCSCCTTSCEEEEE-----------EETT-EEEEEETTTTEEEEEC
T ss_pred ceEEEEEEcCCeEEEEC----CCC----cEeeecCCCCCceeEEEEE-----------ecCC-eEEEEEcccCcEEEEc
Confidence 3544433 35566655 444 4777766666677888875 3346 9999999999999654
No 21
>1rg8_A Heparin-binding growth factor 1; beta-trefoil, hormone/growth factor complex; 1.10A {Homo sapiens} SCOP: b.42.1.1 PDB: 1jqz_A 3fjb_A 1jt3_A 1jt4_A 1jtc_A 3baq_A 3bah_A 3fja_A 3fj9_A 3fjk_A 3hom_A 3fjc_A 3ba5_A 3fjh_A 1jt5_A 1k5v_A 3fjj_A 1jy0_A 3bao_A 3fjf_A ...
Probab=56.22 E-value=33 Score=27.06 Aligned_cols=40 Identities=20% Similarity=0.229 Sum_probs=27.9
Q ss_pred eEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeeecC
Q psy17901 46 SVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHSHH 97 (218)
Q Consensus 46 eVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhSH~ 97 (218)
.|.|....+|..+.|.|+. |..| .|+|+.+.|+.||-...
T Consensus 36 ~V~Gt~~~~~~~s~l~i~s-----------v~~G-~V~I~gv~s~~YLcMn~ 75 (146)
T 1rg8_A 36 TVDGTRDRSDQHIQLQLSA-----------ESVG-EVYIKSTETGQYLAMDT 75 (146)
T ss_dssp CEEEECCTTCTTCCEEEEE-----------EETT-EEEEEETTTCCEEEECT
T ss_pred cEeeeccCCCCceEEEEEe-----------ecCC-eEEEEEcccCcEEEECC
Confidence 3666655545566777764 2345 99999999999997653
No 22
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=51.87 E-value=23 Score=27.75 Aligned_cols=49 Identities=12% Similarity=0.234 Sum_probs=34.5
Q ss_pred eecCCEEEEEecC-CCCceeccccCCCCCCCceeEEEEccCCCCCCc----eEEEcCC
Q psy17901 14 VTCGSVVKLMNVD-YRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSH----WIIKAPT 66 (218)
Q Consensus 14 V~~Gs~IrL~H~~-Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~----WiIe~~~ 66 (218)
|..|. .+|+++. +|..|-.-... ....-.|.+|...+-.|-. |+|+...
T Consensus 2 i~~G~-Y~I~n~~~sgk~lDv~~~s---ta~Gt~V~~w~~~g~~nQ~~~~~W~~~~~~ 55 (148)
T 3nbc_A 2 ITPGT-YNITNVAYTNRLIDLTGSN---PAENTLIIGHHLNKTPSGYGNQQWTLVQLP 55 (148)
T ss_dssp CCSEE-EEEEESSCTTCEEEEGGGC---CSTTEEEEEECCCSTTTCCGGGCEEEEECT
T ss_pred ccCCE-EEEEEecCCCCeEECCCCc---CCCCcEEEEeCCCCChhheeecEEEEEECC
Confidence 34553 8999999 99998764432 2334578888876666778 9998753
No 23
>1jlx_A Agglutinin, amaranthin, ACA; complex (lectin/saccharide), T-disaccharide homodimer, bivalent, lectin; HET: GAL A2G; 2.20A {Amaranthus caudatus} SCOP: b.42.3.1 b.42.3.1 PDB: 1jly_A
Probab=51.17 E-value=39 Score=30.04 Aligned_cols=44 Identities=16% Similarity=0.198 Sum_probs=28.1
Q ss_pred CCCceEEEcCCCCCC-------CCCCeee--eC--CEEEEEecCCcceeeecCCC
Q psy17901 56 VNSHWIIKAPTGKTC-------KRGEPIK--CN--DIIRLTHTTTNKNLHSHHFS 99 (218)
Q Consensus 56 ~Nd~WiIe~~~~~~~-------~~~~~V~--~g--d~IRL~H~~T~~~LhSH~~~ 99 (218)
.+.+|||-..++.+. ..-.+|. .| ..|||+|+..|.||......
T Consensus 73 ~~~~wIvA~~~ep~ed~d~~~ctlFkp~~v~~~~~~~~~f~~vq~g~~~~~~~~~ 127 (303)
T 1jlx_A 73 PNHYWITASANEPDENKSNWACTLFKPLYVEEGNMKKVRLLHVQLGHYTQNYTVG 127 (303)
T ss_dssp TTCCBEEEEESSCCCCTTSTTCCCEEEEESSTTCSSEEEEEETTTTEECEEECCS
T ss_pred CCCceEEecCCCCCcccCcccccceEEEEeccCCCceEEEEEEecCceEEeeecC
Confidence 345677765544331 1223454 33 48999999999999988543
No 24
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=48.98 E-value=67 Score=24.55 Aligned_cols=59 Identities=22% Similarity=0.189 Sum_probs=41.4
Q ss_pred EEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeeecC
Q psy17901 19 VVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHSHH 97 (218)
Q Consensus 19 ~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhSH~ 97 (218)
.|-|+-..||.+|--+ |.| .|.|-...+|..+.|.|.+ |..| .|+|.-+.|+.||....
T Consensus 7 ~~~~~~~~~g~~L~I~----~dG----~V~Gt~~~~~~~s~l~~~~-----------v~~G-~V~I~g~~sg~yL~m~~ 65 (132)
T 3q7x_A 7 EVLLRSTETGQFLRIN----PDG----TVDGTRDRSDPGIQFQISP-----------EGNG-EVLLRSTETGQFLRINP 65 (132)
T ss_dssp CEEEEETTTCCEEEEC----TTS----BEEEECCTTCGGGCEEEEE-----------EETT-EEEEEETTTCCEEEECT
T ss_pred hheeeeccCcEEEEEC----CCC----cEEeecCCCCCCcEEEEEe-----------cccC-EEEEEEEcccEEEEECC
Confidence 3567778888887764 344 4777665555667777765 3344 79999999999998763
No 25
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=47.58 E-value=42 Score=29.36 Aligned_cols=65 Identities=11% Similarity=0.152 Sum_probs=41.2
Q ss_pred EEEEEecCCCCceeccccCCCCCCCceeEEEEc---cCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeee
Q psy17901 19 VVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTE---VKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHS 95 (218)
Q Consensus 19 ~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~---~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhS 95 (218)
+.+|++..+|..|-.-.... ...-.|..|. ..+..|-.|.|+...+ .+..++|+.+.+|.+|-.
T Consensus 7 ~Y~I~N~~SGk~LDV~g~st---anGa~Vqqw~~~g~ng~~nQqW~~~~~~G----------~~G~Y~I~n~~SGkcLDV 73 (293)
T 3ef2_A 7 IYHIENAGVPSAIDLKDGSS---SDGTPIVGWQFTPDTINWHQLWLAEPIPN----------VADTFTLCNLFSGTYMDL 73 (293)
T ss_dssp EEEEEESSSSCEEEEGGGCC---STTEEEEEECCCTTSCCTTCEEEEEECTT----------STTEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCCEEEcCCCCC---CCCcEEEEeecCCCCCCccEEEEEeeccC----------CCceEEEEECCCCCEEec
Confidence 67899999998887654332 2334566665 3334677899987421 123567777777777764
Q ss_pred c
Q psy17901 96 H 96 (218)
Q Consensus 96 H 96 (218)
.
T Consensus 74 ~ 74 (293)
T 3ef2_A 74 Y 74 (293)
T ss_dssp G
T ss_pred C
Confidence 4
No 26
>1ijt_A FGF4, fibroblast growth factor 4; B-trefoil fold, hormone/growth factor complex; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=46.57 E-value=26 Score=26.95 Aligned_cols=49 Identities=8% Similarity=0.165 Sum_probs=32.5
Q ss_pred CCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeeecC
Q psy17901 28 RVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHSHH 97 (218)
Q Consensus 28 g~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhSH~ 97 (218)
|.+|..+ |.| .|.|-.+.++ .+.|.|+. +..| .|+|+.+.|+.||-...
T Consensus 15 g~~LqI~----~dG----~V~Gt~~~~~-~s~l~~~s-----------v~~g-~V~I~gv~s~~YLcmn~ 63 (128)
T 1ijt_A 15 GFHLQAL----PDG----RIGGAHADTR-DSLLELSP-----------VERG-VVSIFGVASRFFVAMSS 63 (128)
T ss_dssp CEEEEEC----TTS----CEEEESSCCG-GGCEEEEE-----------EETT-EEEEEETTTTEEEEECT
T ss_pred CeEEEEC----CCC----cEecccCCCc-cceEEEEe-----------ccCC-EEEEEEcccCcEEEEcC
Confidence 4566654 344 4777654443 56777765 3345 99999999999996653
No 27
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=45.57 E-value=49 Score=29.10 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=39.7
Q ss_pred cCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceee
Q psy17901 16 CGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLH 94 (218)
Q Consensus 16 ~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~Lh 94 (218)
.|...+|++..+|..|-.-... ....-.|..|...+..|-.|.|... +..++|+.+.+|..|-
T Consensus 56 ~G~~Y~I~N~~SGKcLDV~g~s---TadGa~V~qW~~nGg~NQqW~l~~~-------------~G~y~I~n~~SGkcLD 118 (286)
T 3phz_A 56 EADTYTVRNAFAGSYMDLAGHA---ATDGTAIIGYRPTGGDNQKWIISQI-------------NDVWKIKSKETGTFVT 118 (286)
T ss_dssp STTEEEEEETTTCCEEEEGGGC---CSTTEEEEEECCCCCGGGCEEEEES-------------SSCEEEEETTTCCEEE
T ss_pred CCcEEEEEECCCCcEEEeCCCc---CCCCCeEEEeCCCCChhcEEEEEcC-------------CCeEEEEECCCCcEEE
Confidence 4557899999999887553322 2233456666655556778998753 1245666666666665
No 28
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=45.19 E-value=77 Score=29.77 Aligned_cols=40 Identities=8% Similarity=0.081 Sum_probs=27.5
Q ss_pred CEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCC
Q psy17901 18 SVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPT 66 (218)
Q Consensus 18 s~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~ 66 (218)
-.-.|+....|+||.+. ...|+|+...-...-.|.|.++.
T Consensus 99 G~w~lq~~~~g~yl~~~---------~~~~~c~~~~~~~~~~w~~~la~ 138 (493)
T 3llp_A 99 GRWSLQSEAHRRYFGGT---------EDRLSCFAQTVSPAEKWSVHIAM 138 (493)
T ss_dssp SEEEEEETTTCCEEEEE---------BTEEEEEESSCCGGGCEEEEECS
T ss_pred CeEEEEEcccCceecCC---------CceEEEEeccCCccceeeeeecc
Confidence 45777777778787753 46789988652233589998763
No 29
>1q1u_A FGF-12, fibrobast growth factor homologous factor 1, FGF12B; human, hormone/growth factor complex; 1.70A {Homo sapiens} SCOP: b.42.1.1
Probab=44.81 E-value=38 Score=26.54 Aligned_cols=61 Identities=13% Similarity=0.171 Sum_probs=40.7
Q ss_pred cCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeee
Q psy17901 16 CGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHS 95 (218)
Q Consensus 16 ~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhS 95 (218)
-|...+|--. ||.+|..+ |.| .|.|....+|..+.|.|..+ . -..|+|+.+.|+.||-.
T Consensus 9 ~g~~~~Ly~r-~g~~LqI~----~dG----~V~Gt~~~~~~~sile~~sv-----------~-~g~V~I~gv~s~~YLcM 67 (144)
T 1q1u_A 9 KGIVTRLFSQ-QGYFLQMH----PDG----TIDGTKDENSDYTLFNLIPV-----------G-LRVVAIQGVKASLYVAM 67 (144)
T ss_dssp CCEEEEEEET-TTEEEEEC----TTS----CEEEESCTTSGGGCEEEEEE-----------E-TTEEEEEETTTCCEEEE
T ss_pred cCceEEEEEc-CCeEEEEC----CCC----cEeeecCCCCCceeEEEEec-----------c-CCEEEEEEcccCcEEEE
Confidence 3666676654 57777765 344 37777655455667777652 1 25899999999999966
Q ss_pred cC
Q psy17901 96 HH 97 (218)
Q Consensus 96 H~ 97 (218)
..
T Consensus 68 n~ 69 (144)
T 1q1u_A 68 NG 69 (144)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 30
>2p39_A Fibroblast growth factor 23; atypical beta-trefoil fold, signaling protein; HET: SCR; 1.50A {Homo sapiens}
Probab=41.62 E-value=67 Score=25.60 Aligned_cols=61 Identities=18% Similarity=0.340 Sum_probs=41.1
Q ss_pred cCCEEEEEecC--CCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCccee
Q psy17901 16 CGSVVKLMNVD--YRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNL 93 (218)
Q Consensus 16 ~Gs~IrL~H~~--Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~L 93 (218)
+|..++|--.. ||.+|..+ |.| .|.|-.+. +..+.|.|..+ .. ..|+|+.+.|+.||
T Consensus 12 ~~~~~~LY~~~~rtg~~LqI~----~dG----~V~Gt~d~-~~~s~Lei~sv-----------~~-g~V~Ikgv~s~~YL 70 (155)
T 2p39_A 12 WGGLIHLYTATARNSYHLQIH----KNG----HVDGAPHQ-TIYSALMIRSE-----------DA-GFVVITGVMSRRYL 70 (155)
T ss_dssp STTCEEEECTTSSSCCEEEEC----TTS----CEEEESSC-CTTTCEEEEEC-----------GG-GEEEEEETTTTEEE
T ss_pred CCCEEEEEEccCCCceEEEEC----CCC----cEeCccCC-CCcEEEEEEee-----------cC-CEEEEEEeccCcEE
Confidence 57777776643 77788765 344 46665543 45567777653 12 38999999999999
Q ss_pred eecC
Q psy17901 94 HSHH 97 (218)
Q Consensus 94 hSH~ 97 (218)
-...
T Consensus 71 cMn~ 74 (155)
T 2p39_A 71 CMDF 74 (155)
T ss_dssp EECT
T ss_pred EECC
Confidence 7653
No 31
>2p23_A FGF-19, fibroblast growth factor 19; atypical beta-trefoil fold, signaling protein; 1.80A {Homo sapiens} SCOP: b.42.1.1
Probab=37.64 E-value=46 Score=27.61 Aligned_cols=59 Identities=17% Similarity=0.164 Sum_probs=37.8
Q ss_pred CCEEEEEecCC--CC-----ceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCC
Q psy17901 17 GSVVKLMNVDY--RV-----RLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTT 89 (218)
Q Consensus 17 Gs~IrL~H~~T--g~-----~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T 89 (218)
|..+|+++..+ |. +|..+ |.| .|.|-.+ .+..+.|.|.. |.. ..|+|+.+.|
T Consensus 17 g~~~R~~qLY~rtg~g~~~~~LqI~----~dG----~V~Gt~d-~s~~siLei~s-----------v~~-G~V~IkGv~S 75 (194)
T 2p23_A 17 GDPIRLRHLYTSGPHGLSSCFLRIR----ADG----VVDCARG-QSAHSLLEIKA-----------VAL-RTVAIKGVHS 75 (194)
T ss_dssp -CCCEEEEEEEECTTSCCEEEEEEC----TTS----BEEEESS-CCTTTCEEEEE-----------EET-TEEEEEETTT
T ss_pred CCccEEEEEEEccCCCCcceEEEEC----CCC----cEeCccC-CCcccEEEEEe-----------ccC-CEEEEEEccc
Confidence 77888888665 32 44433 444 4766643 34556676664 223 4899999999
Q ss_pred cceeeec
Q psy17901 90 NKNLHSH 96 (218)
Q Consensus 90 ~~~LhSH 96 (218)
+.||...
T Consensus 76 ~~YLcMn 82 (194)
T 2p23_A 76 VRYLCMG 82 (194)
T ss_dssp CCEEEEC
T ss_pred CcEEEEC
Confidence 9999654
No 32
>3iag_C Recombining binding protein suppressor of hairless; protein-DNA complex, signaling, transcription, notch, activator, alternative splicing; HET: XYL; 2.00A {Mus musculus} PDB: 3brg_C* 3nbn_A 2f8x_C 3v79_C*
Probab=37.16 E-value=33 Score=31.85 Aligned_cols=70 Identities=17% Similarity=0.194 Sum_probs=43.0
Q ss_pred ceeecCCEEEEEecC---C--CCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCC------CCCCeeeeCC
Q psy17901 12 QYVTCGSVVKLMNVD---Y--RVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTC------KRGEPIKCND 80 (218)
Q Consensus 12 ~~V~~Gs~IrL~H~~---T--g~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~------~~~~~V~~gd 80 (218)
..|..|+.|.|-|-. | -+|||.-.-.+ .+ ....++-++|...++... ....+|..|+
T Consensus 153 lcI~sGs~VaLFNRlrSQTVsTrYL~ve~g~f---------~a---ss~~W~aF~I~lvd~~~~~~~~~~~~~g~I~YGs 220 (422)
T 3iag_C 153 LCIASGTKVALFNRLRSQTVSTRYLHVEGGNF---------HA---SSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQ 220 (422)
T ss_dssp GBCBTTEEEEEEECSSSCGGGCEEEEEETTEE---------EE---ESSCCCCEEEEECCTTCCSSSCCCCBCSBCBTTC
T ss_pred eeecCCCEEEEeeccccceeeeeEEEeeCCce---------Ee---ecCceecEEEEEecCcccccccCCcCCCeEEeCC
Confidence 578999999999842 3 25888733211 11 122334444544433221 2245788999
Q ss_pred EEEEEecCCccee
Q psy17901 81 IIRLTHTTTNKNL 93 (218)
Q Consensus 81 ~IRL~H~~T~~~L 93 (218)
.|.|.-..||..|
T Consensus 221 ~V~Lv~~~TGv~s 233 (422)
T 3iag_C 221 TVKLVCSVTGMAL 233 (422)
T ss_dssp EEEEEETTTCCBC
T ss_pred EEEEEECCCcccC
Confidence 9999999999754
No 33
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=36.14 E-value=1.1e+02 Score=23.21 Aligned_cols=65 Identities=23% Similarity=0.196 Sum_probs=40.6
Q ss_pred CceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCc
Q psy17901 11 NQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTN 90 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~ 90 (218)
...|..| +|+|+-+.||.||-..+ .| .|.|-...+++..++.+... ..-.+.+..+.|+
T Consensus 42 ~~~v~~G-~V~I~g~~sg~yL~m~~----~G----~v~Gs~~~s~ec~flE~~~~------------~~g~v~ikg~~sg 100 (132)
T 3q7x_A 42 ISPEGNG-EVLLRSTETGQFLRINP----DG----TVDGTRDRSDPGIQFQISPE------------GNGEVLLRSTETG 100 (132)
T ss_dssp EEEEETT-EEEEEETTTCCEEEECT----TS----BEEEECC-CCGGGCEEEEEE------------ETTEEEEEETTTC
T ss_pred EEecccC-EEEEEEEcccEEEEECC----CC----CEeeccCCCCCceeEEEEee------------cCcEEEEEeccCC
Confidence 4567777 89999999999997753 32 24443333333334544432 1235788899999
Q ss_pred ceeeec
Q psy17901 91 KNLHSH 96 (218)
Q Consensus 91 ~~LhSH 96 (218)
.||-..
T Consensus 101 ~YLamn 106 (132)
T 3q7x_A 101 QFLRIN 106 (132)
T ss_dssp CEEEEC
T ss_pred eEEEEC
Confidence 988554
No 34
>2vse_A MTX holotoxin, mosquitocidal toxin; ADP-ribosyltransferase, lectin, ricin-B-like domain; 2.5A {Lysinibacillus sphaericus} PDB: 2vsa_A
Probab=35.22 E-value=67 Score=32.19 Aligned_cols=52 Identities=19% Similarity=0.238 Sum_probs=33.9
Q ss_pred eeecCC--EEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCC
Q psy17901 13 YVTCGS--VVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPT 66 (218)
Q Consensus 13 ~V~~Gs--~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~ 66 (218)
++..|+ .++|+++.+|.+|-+.. ++.+++...|..+...+..+-+|.|+...
T Consensus 311 f~yd~~~g~Y~IrN~~sgk~L~~~~--~~s~~G~~~V~~~~~~gs~~Q~W~i~~~g 364 (841)
T 2vse_A 311 IKYDSKKNAYKIYNRETPTLLLSWN--SNSSNGEQVIRGYTESGSNNQYWTIEKNV 364 (841)
T ss_dssp EEEETTTTEEEEEESSSTTCEEECC--TTCGGGCCBCEEECCCSCGGGCEEEEECT
T ss_pred EEECCCCCEEEEEEcCCCCEEEEcC--CCCCCCceEEEEecCCCCcccEEEEEECC
Confidence 455564 78999999998887754 33333334566665544455689998654
No 35
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB: 2f2f_A
Probab=28.40 E-value=1.3e+02 Score=25.25 Aligned_cols=60 Identities=7% Similarity=0.213 Sum_probs=40.6
Q ss_pred ecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccC-CCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCccee
Q psy17901 15 TCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVK-EDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNL 93 (218)
Q Consensus 15 ~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~-~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~L 93 (218)
..+..|+|+|..||.-|++ |+.| |...+-. ++..-.|.|.+.. .| .|.|+.+.|+.-|
T Consensus 105 ~p~G~VqFvN~~TgtCL~a----y~nG-----vv~~~C~~s~~~Q~wsiiPtt-----------nG-AVQIKnvatg~CL 163 (206)
T 1sr4_A 105 KHREYFRFVNQSLGTCVEA----YGNG-----LIHDICSLDKLAQEFELLPTD-----------SG-AVVIKSVSQGRCV 163 (206)
T ss_dssp SSTTCEEEEETTTCCEEEE----ETTE-----EEEECCCTTCGGGCEEEEEBT-----------TS-CEEEEETTTCCEE
T ss_pred cCCCEEEEEECCCCceeee----ccCC-----eEEecCCCCCcccEEEEecCC-----------Cc-cEEEEECCCCccC
Confidence 5688899999999999988 4443 3333222 2224578887632 22 3688899999888
Q ss_pred ee
Q psy17901 94 HS 95 (218)
Q Consensus 94 hS 95 (218)
.+
T Consensus 164 ~t 165 (206)
T 1sr4_A 164 TY 165 (206)
T ss_dssp EE
T ss_pred Cc
Confidence 65
No 36
>3vsf_A Ricin B lectin; GH43 CBM13, EXO-beta-1,3-galactanase, sugar binding protein; 2.76A {Clostridium thermocellum} PDB: 3vsz_A* 3vt0_A* 3vt1_B* 3vt2_A*
Probab=27.64 E-value=1.3e+02 Score=27.66 Aligned_cols=66 Identities=11% Similarity=0.130 Sum_probs=42.0
Q ss_pred cCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeee
Q psy17901 16 CGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHS 95 (218)
Q Consensus 16 ~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhS 95 (218)
.|...+|++..+|..|-.-... ....-.|..+...+..|-.|.+.... +..++|+...+|..|-.
T Consensus 359 ~~~~y~i~n~~sg~cLdv~~~~---~~~G~~v~~~~c~g~~~Q~W~~~~~g------------~g~y~i~n~~sg~cLdv 423 (526)
T 3vsf_A 359 DTTRYKLVNKNSGKVLDVLDGS---VDNAAQIVQWTDNGSLSQQWYLVDVG------------GGYKKIVNVKSGRALDV 423 (526)
T ss_dssp CCCCEEEEETTTCCEEEEGGGC---CSTTEEEEEECCCCCGGGCEEEEECS------------TTEEEEEESSSCCEEEE
T ss_pred CCccEEEEECCCCceEEecCCC---CCCCcEEEEccCCCCcceEEEEEECC------------CCEEEEEECCCCCEEEe
Confidence 4677899999999888654322 12234565555444456689887542 13567777777777764
Q ss_pred c
Q psy17901 96 H 96 (218)
Q Consensus 96 H 96 (218)
.
T Consensus 424 ~ 424 (526)
T 3vsf_A 424 K 424 (526)
T ss_dssp G
T ss_pred C
Confidence 3
No 37
>3laz_A D-galactarate dehydratase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.92A {Escherichia coli}
Probab=26.97 E-value=28 Score=26.05 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=20.3
Q ss_pred CCceeecCCEE--EEEecCCCCceeccccCCC
Q psy17901 10 NNQYVTCGSVV--KLMNVDYRVRLHSHDVKYG 39 (218)
Q Consensus 10 ~~~~V~~Gs~I--rL~H~~Tg~~LHSH~~~yp 39 (218)
....+.||-.| .++-+.-|.++|+|.+..|
T Consensus 66 Ge~ViKYG~~IG~A~~dI~~Ge~VH~hNv~~~ 97 (99)
T 3laz_A 66 NGEIIRYGEVIGYAVRAIPRGSWIDESMVVLP 97 (99)
T ss_dssp TCEEEETTEEEEEESSCBCTTCBCCGGGEECC
T ss_pred CCeEEECCcChhhccccCCCCCeEEeeeeccC
Confidence 34567888887 3344556788888887654
No 38
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=26.96 E-value=33 Score=23.91 Aligned_cols=30 Identities=23% Similarity=0.163 Sum_probs=21.9
Q ss_pred CCceeecCCEEEEEecCC-CCceeccccCCC
Q psy17901 10 NNQYVTCGSVVKLMNVDY-RVRLHSHDVKYG 39 (218)
Q Consensus 10 ~~~~V~~Gs~IrL~H~~T-g~~LHSH~~~yp 39 (218)
....|.-|++|++.|... ...+|+|....|
T Consensus 19 ~~i~v~~Gd~V~~~N~~~~~H~v~~~~~~~~ 49 (105)
T 3cvb_A 19 ANVTVHPGDTVKWVNNKLPPHNILFDDKQVP 49 (105)
T ss_dssp SEEEECTTEEEEEEECSSCCEEEEECTTSSG
T ss_pred CEEEEcCCCEEEEEECCCCCCeEEEeCCCCC
Confidence 345789999999988764 457788765544
No 39
>3p6i_A De novo designed beta-trefoil architecture with S primary structure; de novo protein; HET: SO4; 1.32A {Synthetic} PDB: 3ogf_A
Probab=25.30 E-value=2.4e+02 Score=21.95 Aligned_cols=64 Identities=22% Similarity=0.180 Sum_probs=37.0
Q ss_pred CceeecCCEEEEEecCCCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCc
Q psy17901 11 NQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTN 90 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~ 90 (218)
...|..| +|+|.-+.||.||-... .| .|.|-...+++ .-++|+.. +..| .|.|..+.|+
T Consensus 77 i~sv~~G-vV~I~Gv~tg~yL~Mn~----dG----~l~Gs~~~s~e--c~flEi~~---------v~~G-~V~Ikgv~Sg 135 (142)
T 3p6i_A 77 ISPEGNG-EVLLKSTETGQYLRINP----DG----TVDGTRDRSDT--HIQFQISP---------EGNG-EVLLKSTETG 135 (142)
T ss_dssp EEEEETT-EEEEEETTTCCEEEECT----TS----BEEEECCTTCT--TCCEEEEE---------CSSS-CEEEEETTTT
T ss_pred EEeccCC-EEEEEEecCceEEeECC----CC----CCccccCCCCC--eEEEEEEE---------EeCC-EEEEEEEecc
Confidence 3456667 88888888888887643 22 24333322222 22222211 1123 5889999999
Q ss_pred ceeee
Q psy17901 91 KNLHS 95 (218)
Q Consensus 91 ~~LhS 95 (218)
.||..
T Consensus 136 ~YLaM 140 (142)
T 3p6i_A 136 QYLRI 140 (142)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99954
No 40
>3ef2_A Agglutinin, lectin; beta-trefoil, calcium-binding, carbohydrate-binding, sugar-binding, sugar binding protein; HET: FUC GAL GLA; 1.80A {Marasmius oreades} PDB: 2iho_A*
Probab=24.94 E-value=1.6e+02 Score=25.68 Aligned_cols=65 Identities=11% Similarity=0.143 Sum_probs=41.0
Q ss_pred CCEEEEEecCCCCceeccccCCCCCCCceeEEEEc----cCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcce
Q psy17901 17 GSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTE----VKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKN 92 (218)
Q Consensus 17 Gs~IrL~H~~Tg~~LHSH~~~yp~gS~qQeVT~y~----~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~ 92 (218)
+..++|++..+|..|-...... ...-.|..|. ..++ |-.|.|....+ +..++|....+|..
T Consensus 57 ~G~Y~I~n~~SGkcLDV~~~st---anGt~V~qw~~~~~~~g~-nQqW~l~~~~g-----------~G~y~I~n~~SGk~ 121 (293)
T 3ef2_A 57 ADTFTLCNLFSGTYMDLYNGSS---EAGTAVNGWQGTAFTTNP-HQLWTIKKSSD-----------GTSYKIQNYGSKTF 121 (293)
T ss_dssp TTEEEEEETTTCCEEEEGGGCC---STTEEEEEECCCTTCCCG-GGCEEEEECTT-----------SSSEEEEETTTCCE
T ss_pred CceEEEEECCCCCEEecCCCCC---CCCCEEEEeccCCCCCCC-CcEEEEEEeCC-----------CCEEEEEECCCCcE
Confidence 4688999999998886543322 2234566665 3333 67899986422 12467777777777
Q ss_pred eeec
Q psy17901 93 LHSH 96 (218)
Q Consensus 93 LhSH 96 (218)
|-..
T Consensus 122 LDV~ 125 (293)
T 3ef2_A 122 VDLV 125 (293)
T ss_dssp EEEG
T ss_pred EEeC
Confidence 7543
No 41
>3brd_A LIN-12 and GLP-1 phenotype protein 1, isoform A; protein-DNA complex, signaling, transcription, notch; HET: DNA; 2.21A {Caenorhabditis elegans} SCOP: b.1.18.1 b.2.5.8 b.42.7.1 PDB: 2fo1_A 1ttu_A* 3brf_A*
Probab=24.57 E-value=1.1e+02 Score=28.80 Aligned_cols=69 Identities=16% Similarity=0.151 Sum_probs=40.4
Q ss_pred eeecCCEEEEEecC---C--CCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCC--------CCCCeeeeC
Q psy17901 13 YVTCGSVVKLMNVD---Y--RVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTC--------KRGEPIKCN 79 (218)
Q Consensus 13 ~V~~Gs~IrL~H~~---T--g~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~--------~~~~~V~~g 79 (218)
-|..|+.|.|-|-- | -+|||.-.-. |-.....++-++|...++... ....+|.-|
T Consensus 199 cI~sGs~VaLFNRlRSQTVsTrYL~Ve~g~------------f~ass~~W~aF~I~Lvd~~~~~~e~~~f~~~dg~I~YG 266 (477)
T 3brd_A 199 CIASGTKVALFNRLRSQTVSTRYLHVEGNA------------FHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVYYG 266 (477)
T ss_dssp BCBTTSEEEEEECSTTCGGGCEEEEEETTE------------EEEESSCCCCEEEEEECC----CCCSEEEEECSBCBTT
T ss_pred eecCCCEEEeeeeecccccceeEEEecCCc------------eEeecCccccEEEEEecCcccccccccccccCCeEEeC
Confidence 48999999999833 3 2588874221 111112233334433332110 123468889
Q ss_pred CEEEEEecCCccee
Q psy17901 80 DIIRLTHTTTNKNL 93 (218)
Q Consensus 80 d~IRL~H~~T~~~L 93 (218)
++|.|.-..||..|
T Consensus 267 s~V~Lvc~~TGv~s 280 (477)
T 3brd_A 267 SVVKLVDSVTGIAL 280 (477)
T ss_dssp CEEEEEETTTCCBC
T ss_pred CEEEEEECCCCccC
Confidence 99999999999766
No 42
>1ihk_A GLIA-activating factor; B-trefoil fold, hormone/growth factor complex; 2.20A {Homo sapiens} SCOP: b.42.1.1 PDB: 1g82_A*
Probab=23.82 E-value=89 Score=25.30 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=33.0
Q ss_pred CCCceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeeec
Q psy17901 27 YRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHSH 96 (218)
Q Consensus 27 Tg~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhSH 96 (218)
||.+|..+ |.| .|.|-...+|..+.|.|.. |..| .|+|+.+.|+.||-..
T Consensus 36 ~g~~LqI~----~dG----~V~Gt~~~~s~~silei~s-----------v~~g-~V~I~gv~s~~YLcMn 85 (174)
T 1ihk_A 36 TGFHLEIF----PNG----TIQGTRKDHSRFGILEFIS-----------IAVG-LVSIRGVDSGLYLGMN 85 (174)
T ss_dssp TSCEEEEC----TTS----CEEEESSTTCGGGCEEEEE-----------EETT-EEEEEETTTCCEEEEC
T ss_pred CCcEEEEC----CCC----cEEeecCCCCCcceEEEEe-----------ccCc-eEEEEEcccCcEEEEc
Confidence 35556553 344 3777665545556677764 2234 8999999999999665
No 43
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.62 E-value=2.3e+02 Score=21.94 Aligned_cols=15 Identities=7% Similarity=0.078 Sum_probs=11.1
Q ss_pred EEEEEecCCcceeeec
Q psy17901 81 IIRLTHTTTNKNLHSH 96 (218)
Q Consensus 81 ~IRL~H~~T~~~LhSH 96 (218)
.+.|++ .+|+||...
T Consensus 113 ~~aLra-~nG~yl~~~ 127 (155)
T 2yug_A 113 KMALLA-SNSCFIRCN 127 (155)
T ss_dssp CCEEEE-TTSCBEEEC
T ss_pred EEEEEe-CCCCEEEEc
Confidence 567888 689988653
No 44
>3llp_A Fascin; beta-trefoil, actin bundling protein, cancer, metastasis, CE migration, acetylation, actin-binding, cytoplasm, phosphopr protein binding; HET: EPE; 1.80A {Homo sapiens} PDB: 1dfc_A* 3lna_A* 3o8k_A* 3p53_A* 4gov_A 4goy_A 4gp3_A 4gp0_A*
Probab=22.22 E-value=1.6e+02 Score=27.64 Aligned_cols=57 Identities=18% Similarity=0.177 Sum_probs=34.3
Q ss_pred CceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecCCcceeeecC
Q psy17901 29 VRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTTTNKNLHSHH 97 (218)
Q Consensus 29 ~~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~T~~~LhSH~ 97 (218)
.+|-||.-.|=.....=.|+|-....+....|+|++.. .-.+-|+....|+||.++.
T Consensus 60 ~~lks~~G~yL~~d~~G~v~~~~~~~~~~~~f~~~~~~------------dG~w~lq~~~~g~yl~~~~ 116 (493)
T 3llp_A 60 VCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHD------------DGRWSLQSEAHRRYFGGTE 116 (493)
T ss_dssp BCEECTTSCEEEECTTSCEEEEESSCCGGGCEEEEECT------------TSEEEEEETTTCCEEEEEB
T ss_pred EEEecCCCcEeecCCCCcEEeCcccCCCCceEEEEECC------------CCeEEEEEcccCceecCCC
Confidence 35555555552222222577755544455577777532 1378888989999997764
No 45
>1pwa_A FGF-19, fibroblast growth factor-19; beta trefoil, disulphide bonds, hormone-growth factor comple; 1.30A {Homo sapiens} SCOP: b.42.1.1
Probab=22.16 E-value=1e+02 Score=24.73 Aligned_cols=60 Identities=17% Similarity=0.147 Sum_probs=36.4
Q ss_pred cCCEEEEEecCC--CC-----ceeccccCCCCCCCceeEEEEccCCCCCCceEEEcCCCCCCCCCCeeeeCCEEEEEecC
Q psy17901 16 CGSVVKLMNVDY--RV-----RLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTGKTCKRGEPIKCNDIIRLTHTT 88 (218)
Q Consensus 16 ~Gs~IrL~H~~T--g~-----~LHSH~~~yp~gS~qQeVT~y~~~~D~Nd~WiIe~~~~~~~~~~~~V~~gd~IRL~H~~ 88 (218)
.|..+|+++..+ |. +|..+ |.| .|.|-. +.+..+.|.|..+ .. ..|+|+.+.
T Consensus 4 ~g~~~R~~~LY~~~~~g~~~~~LqI~----~dG----~V~Gt~-d~~~~siLei~sv-----------~~-g~V~I~gv~ 62 (162)
T 1pwa_A 4 SGDPIRLRHLYTSGPHGLSSCFLRIR----ADG----VVDCAR-GQSAHSLLEIKAV-----------AL-RTVAIKGVH 62 (162)
T ss_dssp ---CEEEEEEEECCTTSCCCEEEEEC----TTS----BEEEES-SCCGGGCEEEEEE-----------ET-TEEEEEETT
T ss_pred cCCceEEEEEEEccCCCCceeEEEEC----CCC----cEeCCc-CCCCccEEEEEee-----------cC-CEEEEEEcc
Confidence 356678888655 32 34433 444 476663 3344556666642 23 589999999
Q ss_pred Ccceeeec
Q psy17901 89 TNKNLHSH 96 (218)
Q Consensus 89 T~~~LhSH 96 (218)
|+.||-..
T Consensus 63 s~~YLcMn 70 (162)
T 1pwa_A 63 SVRYLCMG 70 (162)
T ss_dssp TCCEEEEC
T ss_pred cCcEEEEc
Confidence 99999665
No 46
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=21.55 E-value=87 Score=21.58 Aligned_cols=25 Identities=8% Similarity=0.013 Sum_probs=17.2
Q ss_pred CceeecCCEEEEEecCC-CCceeccc
Q psy17901 11 NQYVTCGSVVKLMNVDY-RVRLHSHD 35 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~T-g~~LHSH~ 35 (218)
...|.-|++|++.|... ...++++.
T Consensus 18 ~i~v~~G~tV~~~n~~~~~H~v~~~~ 43 (99)
T 1plc_A 18 EFSISPGEKIVFKNNAGFPHNIVFDE 43 (99)
T ss_dssp EEEECTTCEEEEEECSSCCBCCEECT
T ss_pred EEEECCCCEEEEEECCCCceEEEEeC
Confidence 45689999999988764 33444444
No 47
>1f53_A Yeast killer toxin-like protein; killer toxin-like protein,SKLP, crystallin family; NMR {Streptomyces SP} SCOP: b.11.1.4
Probab=21.43 E-value=1.2e+02 Score=21.76 Aligned_cols=35 Identities=31% Similarity=0.360 Sum_probs=23.1
Q ss_pred CceeccccCCCCCCCceeEEEEccC--CCCCCceEEEcCCC
Q psy17901 29 VRLHSHDVKYGTGSGQQSVTGTEVK--EDVNSHWIIKAPTG 67 (218)
Q Consensus 29 ~~LHSH~~~yp~gS~qQeVT~y~~~--~D~Nd~WiIe~~~~ 67 (218)
.||+--.+ ..+.|+|-||.+. .|-.++|+=.+..+
T Consensus 11 ~~LkiwsH----~~gr~s~~CyAN~G~~~fg~wWVdkIsTG 47 (84)
T 1f53_A 11 NFLKIWSH----SGGQQSVDCYANRGRIDFGGWWVDKISTG 47 (84)
T ss_dssp SSEEEEEE----CSSCEEEEEECSSBCCBCCSCCEEEEECT
T ss_pred CeEEEEEe----cCCCcccceeeccCcccccCEEEEEEecC
Confidence 37754333 2457999999886 34456888777655
No 48
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=20.46 E-value=76 Score=21.84 Aligned_cols=26 Identities=8% Similarity=-0.041 Sum_probs=18.0
Q ss_pred CceeecCCEEEEEecCC-CCceecccc
Q psy17901 11 NQYVTCGSVVKLMNVDY-RVRLHSHDV 36 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~T-g~~LHSH~~ 36 (218)
...|.-|++|++.|... ...++++..
T Consensus 18 ~i~v~~G~tV~~~n~~~~~H~~~~~~~ 44 (99)
T 1byp_A 18 DLSIASGEKITFKNNAGFPHNDLFDKK 44 (99)
T ss_dssp EEEECTTEEEEEEECSSCCBCCEECTT
T ss_pred EEEECCCCEEEEEECCCCcceEEEeCC
Confidence 34688999999988764 345555543
No 49
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=20.41 E-value=77 Score=21.69 Aligned_cols=29 Identities=10% Similarity=0.061 Sum_probs=19.6
Q ss_pred CceeecCCEEEEEecCC-CCceeccccCCC
Q psy17901 11 NQYVTCGSVVKLMNVDY-RVRLHSHDVKYG 39 (218)
Q Consensus 11 ~~~V~~Gs~IrL~H~~T-g~~LHSH~~~yp 39 (218)
...|.-|++|++.|... ...+|++....|
T Consensus 19 ~i~v~~G~~V~~~n~~~~~H~~~~~~~~~p 48 (98)
T 2plt_A 19 TLTIKSGETVNFVNNAGFPHNIVFDEDAIP 48 (98)
T ss_dssp EEEECTTCEEEEEECSSCCEEEEECGGGSC
T ss_pred EEEECCCCEEEEEECCCCceEEEEeCCCCC
Confidence 35689999999987764 345566654333
Done!