RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17901
(218 letters)
>d1t9fa_ b.42.6.1 (A:) Hypothetical protein R12E2.13 (1D10)
{Caenorhabditis elegans [TaxId: 6239]}
Length = 178
Score = 138 bits (350), Expect = 3e-42
Identities = 74/179 (41%), Positives = 89/179 (49%), Gaps = 39/179 (21%)
Query: 8 ARNNQYVTCGSVVKLMNVDYRVRLHSHDVKYGTGSGQQSVTGTEVKEDVNSHWIIKAPTG 67
+ +VTC SV+K +N + RLHSHDVKYG+GSGQQSVT + +D+NSHW I
Sbjct: 1 GSDEDFVTCYSVLKFINANDGSRLHSHDVKYGSGSGQQSVTAVKNSDDINSHWQIFPALN 60
Query: 68 KTCKRGEPIKCNDIIRLTHTTTNKNLHSHHFSSPLSGAQ-EVSA---------------- 110
C RG+ IKC D IRL H TT LHSHHF++PLS EVSA
Sbjct: 61 AKCNRGDAIKCGDKIRLKHLTTGTFLHSHHFTAPLSKQHQEVSAFGSEAESDTGDDWTVI 120
Query: 111 ---------------------YLSATRQTYGRPISGQYEIVTVSWPDHNPVLWKTMEGI 148
YLS + Q +GRPI GQ E+V WK EGI
Sbjct: 121 CNGDEWLESEQFKLRHAVTGSYLSLSGQQFGRPIHGQREVVGTDSITGG-SAWKVAEGI 178
>d1y2oa1 a.238.1.3 (A:1-248) BAP2/IRSp53 N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 248
Score = 34.2 bits (78), Expect = 0.008
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 161 RRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
++ + + + KK + +++ K K + + KK +KK + K +K KE
Sbjct: 106 EQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQ 163
Score = 33.5 bits (76), Expect = 0.013
Identities = 10/51 (19%), Positives = 24/51 (47%)
Query: 168 KKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
+ KK + +++ K + K + + KK +KK + K +K ++ +
Sbjct: 114 RYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQGSKNPQKYSDKELQY 164
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 32.6 bits (74), Expect = 0.027
Identities = 8/31 (25%), Positives = 22/31 (70%)
Query: 180 KKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
+ K+N+K+++ ++K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 31.9 bits (72), Expect = 0.048
Identities = 8/32 (25%), Positives = 21/32 (65%)
Query: 181 KKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKI 212
+ K +K++E ++K ++ K K+K +K+++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKERL 332
Score = 31.1 bits (70), Expect = 0.079
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 179 KKKKKKKNKKKKKEKKKKKKKKKKKKKKKKK 209
+ K+ K+++ E+K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 30.3 bits (68), Expect = 0.14
Identities = 8/35 (22%), Positives = 22/35 (62%)
Query: 161 RRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKK 195
R + K+ +++++ ++K ++ K K+K EK++
Sbjct: 297 RNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 30.3 bits (68), Expect = 0.17
Identities = 7/31 (22%), Positives = 21/31 (67%)
Query: 170 KKEEKKKKKKKKKKKKNKKKKKEKKKKKKKK 200
+ K+ +K+++ ++K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 30.3 bits (68), Expect = 0.18
Identities = 8/31 (25%), Positives = 20/31 (64%)
Query: 168 KKKKEEKKKKKKKKKKKKNKKKKKEKKKKKK 198
+ +E +K+++ ++K + K KEK +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.9 bits (67), Expect = 0.19
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 178 KKKKKKKKNKKKKKEKKKKKKKKKKKKKKKK 208
+ K+ + +++ +EK ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.9 bits (67), Expect = 0.23
Identities = 7/31 (22%), Positives = 19/31 (61%)
Query: 175 KKKKKKKKKKKNKKKKKEKKKKKKKKKKKKK 205
+ K+ +K++ ++K + K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.2 bits (65), Expect = 0.32
Identities = 7/31 (22%), Positives = 21/31 (67%)
Query: 167 EKKKKEEKKKKKKKKKKKKNKKKKKEKKKKK 197
+ KE +K+++ ++K ++ K K++ +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.2 bits (65), Expect = 0.33
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 176 KKKKKKKKKKNKKKKKEKKKKKKKKKKKKKK 206
+ K+ +K+ + ++K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 29.2 bits (65), Expect = 0.37
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 174 KKKKKKKKKKKKNKKKKKEKKKKKKKKKKKK 204
+ K+ +K+++ ++K + K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 28.8 bits (64), Expect = 0.56
Identities = 6/31 (19%), Positives = 20/31 (64%)
Query: 171 KEEKKKKKKKKKKKKNKKKKKEKKKKKKKKK 201
+ K+ +K+++ ++ ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 28.4 bits (63), Expect = 0.60
Identities = 7/31 (22%), Positives = 20/31 (64%)
Query: 173 EKKKKKKKKKKKKNKKKKKEKKKKKKKKKKK 203
+ K+ +K+++ +K ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 28.4 bits (63), Expect = 0.70
Identities = 6/31 (19%), Positives = 20/31 (64%)
Query: 177 KKKKKKKKKNKKKKKEKKKKKKKKKKKKKKK 207
+ K+ +K ++ +++ ++ K K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 27.6 bits (61), Expect = 1.2
Identities = 6/31 (19%), Positives = 20/31 (64%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKK 196
+ K+ +K+++ ++K ++ K+K +K++
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 26.5 bits (58), Expect = 2.4
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 187 KKKKKEKKKKKKKKKKKKKKKKKKKIMRKE 216
+ KE +K+++ ++K ++ K K+ KE
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKE 330
Score = 25.3 bits (55), Expect = 6.8
Identities = 6/31 (19%), Positives = 17/31 (54%)
Query: 185 KNKKKKKEKKKKKKKKKKKKKKKKKKKIMRK 215
K+ +K+++ ++K ++ K K+K +
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAEKER 331
Score = 24.5 bits (53), Expect = 10.0
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 190 KKEKKKKKKKKKKKKKKKKKKKIMRKEE 217
+ K+ +K+++ ++K ++ K K E
Sbjct: 301 LQAVKENQKRRETEEKMRRAKLAKEKAE 328
>d1oisa_ e.15.1.1 (A:) Eukaryotic DNA topoisomerase I, N-terminal
DNA-binding fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 223
Score = 29.7 bits (67), Expect = 0.21
Identities = 9/55 (16%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 164 RKKEKKKKEEKKKKKKK---KKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRK 215
++ + K+ + K + +KE+KK+ ++KK+ + +++K
Sbjct: 75 KESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEED 129
Score = 27.8 bits (62), Expect = 0.99
Identities = 8/40 (20%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 180 KKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIM--RKEE 217
+ +K++ K+ ++KK+ + +++K ++ K + R+E+
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEEDYKFCELDGRREQ 141
Score = 25.8 bits (57), Expect = 3.9
Identities = 10/55 (18%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 164 RKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
+ K+ + K+ + + K + + +K++KK+ ++KK+I + E
Sbjct: 71 LQVLKESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQI--RLER 123
Score = 25.4 bits (56), Expect = 5.0
Identities = 9/54 (16%), Positives = 22/54 (40%)
Query: 165 KKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
K+ + K+ + + +K++KK+ ++KK+ + K E
Sbjct: 75 KESGGPLNGIEIKEFSRCDFTKMFDYFQLQKEQKKQLTSQEKKQIRLEREKFEE 128
Score = 25.1 bits (55), Expect = 6.5
Identities = 7/41 (17%), Positives = 26/41 (63%)
Query: 172 EEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKI 212
+ +K++KK+ ++ K+ + E++K ++ K + +++++
Sbjct: 102 QLQKEQKKQLTSQEKKQIRLEREKFEEDYKFCELDGRREQV 142
>d1je5a_ b.40.4.7 (A:) gp2.5 {Bacteriophage T7 [TaxId: 10760]}
Length = 197
Score = 29.2 bits (65), Expect = 0.26
Identities = 4/48 (8%), Positives = 17/48 (35%)
Query: 170 KKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEE 217
++ + ++ + K ++ ++ + + KK + E
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKPLKPYEG 92
Score = 25.8 bits (56), Expect = 3.8
Identities = 5/42 (11%), Positives = 14/42 (33%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKK 207
K + ++ + K ++ E+ + + KK
Sbjct: 45 PNKDPRCQRMVDEIVKCHEEAYAAAVEEYEANPPAVARGKKP 86
>d1k4ta3 e.15.1.1 (A:201-430) Eukaryotic DNA topoisomerase I,
N-terminal DNA-binding fragment {Human (Homo sapiens)
[TaxId: 9606]}
Length = 230
Score = 28.9 bits (65), Expect = 0.32
Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 165 KKEKKKKEEKKKKKKKK----KKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRK 215
+KE +E+ K + + K + E +K+ K++K K K++ +K++++
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 27.4 bits (61), Expect = 1.2
Identities = 11/55 (20%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 166 KEKKKKEEKKKKKKKKK---KKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEE 217
+++ EEK K + ++ K + + +K+ K++K K K++ +E
Sbjct: 83 RKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKE 137
Score = 27.4 bits (61), Expect = 1.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 180 KKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIM 213
K + + K+ KE+K K K++ +K K+ IM
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIM 143
Score = 24.7 bits (54), Expect = 8.4
Identities = 9/41 (21%), Positives = 21/41 (51%)
Query: 172 EEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKI 212
+ + + +K+ K++ K K+E +K K+ K++I
Sbjct: 110 KAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKERI 150
>d1gpua1 c.36.1.10 (A:3-337) Transketolase (TK), PP module {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 335
Score = 29.3 bits (65), Expect = 0.34
Identities = 9/52 (17%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 141 LWKTMEGIFIHPSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKE 192
+ F+ P + V + +++ K + K K + +KK + E
Sbjct: 277 FGFNPDKSFVVPQE-VYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAE 327
>d1kvva_ d.201.1.1 (A:) SRP19 {Archaeon Archaeoglobus fulgidus
[TaxId: 2234]}
Length = 104
Score = 28.2 bits (63), Expect = 0.34
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 151 HPSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKK 200
+P R +K K + + +K + + +K++++K KKKKKK
Sbjct: 55 YPKSWWEEGGRVVVEKRGTKTKLMIELARKIAEIREQKREQKKDKKKKKK 104
>d1mswd_ e.8.1.3 (D:) T7 RNA polymerase {Bacteriophage T7 [TaxId:
10760]}
Length = 882
Score = 29.0 bits (64), Expect = 0.45
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 167 EKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
+ + E K KK +++ NK+ KK + + K
Sbjct: 151 GRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLSKGL 194
Score = 28.2 bits (62), Expect = 0.99
Identities = 8/46 (17%), Positives = 16/46 (34%)
Query: 161 RRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKK 206
R R E K ++ +++ K+ KK + + K
Sbjct: 151 GRIRDLEAKHFKKNVEEQLNKRVGHVYKKAFMQVVEADMLSKGLLG 196
>d1wxqa1 c.37.1.8 (A:1-319) GTP-binding protein PH0525 {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 319
Score = 28.7 bits (63), Expect = 0.51
Identities = 12/77 (15%), Positives = 21/77 (27%)
Query: 142 WKTMEGIFIHPSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKK 201
EG DPV + R+ + K K K+ +K K + +
Sbjct: 114 KTDPEGQPTDYHDPVEDIEFLEREIDYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLS 173
Query: 202 KKKKKKKKKKIMRKEEN 218
+ + N
Sbjct: 174 GIGVNENDVWEAMHKLN 190
Score = 25.3 bits (54), Expect = 6.4
Identities = 13/124 (10%), Positives = 36/124 (29%), Gaps = 2/124 (1%)
Query: 93 LHSHHFSSPLSGAQEVSAYLSATRQTYGRPISGQYEIVTVSWPDHNPVLWKTMEGIFIHP 152
L G + + A+ + +G+ + H+P + +E +
Sbjct: 81 LVPGAHEGRGLGNKFLDDLRMASALIHVVDATGKTDPEGQPTDYHDP--VEDIEFLEREI 138
Query: 153 SDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKI 212
+ + K K+ + +K K + + + + K + K
Sbjct: 139 DYWIYGILSKGWDKFAKRIKLQKIKLESAIAEHLSGIGVNENDVWEAMHKLNLPEDPTKW 198
Query: 213 MRKE 216
+ +
Sbjct: 199 SQDD 202
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 28.1 bits (62), Expect = 0.81
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 181 KKKKKNKKKKKEKKKKKKKKKKKKKKKKK 209
K N E +K++ K K+ + +K
Sbjct: 208 KDNAHNVTVDLEMRKQRNKTTKQVRTIEK 236
Score = 26.5 bits (58), Expect = 2.6
Identities = 5/68 (7%), Positives = 20/68 (29%)
Query: 151 HPSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
++ + +K+ + + + + +K++ K K+ +
Sbjct: 173 FFTNDILCKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVR 232
Query: 211 KIMRKEEN 218
I +
Sbjct: 233 TIEKITPI 240
Score = 26.1 bits (57), Expect = 3.1
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 138 NPVLWKTME-GIFIHPSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKK 196
N +L KT + S H + K + +K++NK K+ + +
Sbjct: 176 NDILCKTYFYQKELGYSGDFIYDHAEGCEISWKDNAHNVTVDLEMRKQRNKTTKQVRTIE 235
Query: 197 KKKKKK 202
K +
Sbjct: 236 KITPIE 241
Score = 25.7 bits (56), Expect = 4.9
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 183 KKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKE 216
K + + +K++ K K+ + +KI E
Sbjct: 208 KDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIE 241
Score = 25.7 bits (56), Expect = 5.0
Identities = 5/34 (14%), Positives = 14/34 (41%)
Query: 182 KKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRK 215
K + + +K++ K K+ + +K +
Sbjct: 208 KDNAHNVTVDLEMRKQRNKTTKQVRTIEKITPIE 241
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 28.1 bits (62), Expect = 0.85
Identities = 9/52 (17%), Positives = 17/52 (32%)
Query: 167 EKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
+ K E K+ + +K K+ + K + K K E +
Sbjct: 220 IRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYS 271
Score = 27.3 bits (60), Expect = 1.5
Identities = 10/47 (21%), Positives = 16/47 (34%)
Query: 164 RKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
R + K E K+ + +K K+ E K + K K
Sbjct: 216 RDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLL 262
Score = 26.5 bits (58), Expect = 2.6
Identities = 8/49 (16%), Positives = 15/49 (30%)
Query: 163 RRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKK 211
R K E ++ + +K K+ K + K K +
Sbjct: 221 RSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAE 269
Score = 25.8 bits (56), Expect = 4.6
Identities = 7/47 (14%), Positives = 14/47 (29%)
Query: 165 KKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKK 211
K+ E +K K+ + K + + K + K
Sbjct: 227 HTLSKEYETQKVPKENAENYLIKISENKNDAKVSLLLNNCDAEYSKY 273
Score = 25.4 bits (55), Expect = 5.8
Identities = 8/61 (13%), Positives = 21/61 (34%)
Query: 158 NSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEE 217
S + + ++E K + + K + K+ + +K K+ + + K
Sbjct: 192 KSKCKNNALYEACEKECIDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKIS 251
Query: 218 N 218
Sbjct: 252 E 252
Score = 24.6 bits (53), Expect = 9.5
Identities = 7/46 (15%), Positives = 15/46 (32%)
Query: 165 KKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
K + K + K+ +K ++ + K + K K
Sbjct: 213 MKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAK 258
Score = 24.6 bits (53), Expect = 9.5
Identities = 7/46 (15%), Positives = 16/46 (34%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKK 211
+ K + K + K+ + +K K+ + K + K
Sbjct: 209 IDPCMKYRDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENK 254
>d1v63a_ a.21.1.1 (A:) Nucleolar transcription factor 1 (Upstream
binding factor 1, UBF-1) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 101
Score = 26.4 bits (58), Expect = 1.4
Identities = 6/47 (12%), Positives = 21/47 (44%)
Query: 167 EKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIM 213
+K+ +K ++++++ K + + + + K+ K+K
Sbjct: 51 SQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
Score = 25.2 bits (55), Expect = 3.5
Identities = 9/45 (20%), Positives = 19/45 (42%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
KE KK ++++++ K K + + K+ K+K
Sbjct: 53 KEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
Score = 24.8 bits (54), Expect = 3.7
Identities = 6/45 (13%), Positives = 18/45 (40%)
Query: 163 RRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKK 207
+ +K +E++++ K +++ K+ K+K
Sbjct: 53 KEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKSG 97
>d2c6ja1 a.264.1.1 (A:15-308) Duffy receptor, alpha form {Plasmodium
knowlesi [TaxId: 5850]}
Length = 294
Score = 27.3 bits (60), Expect = 1.4
Identities = 12/52 (23%), Positives = 18/52 (34%)
Query: 167 EKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
+KKK+ K KK +K E K++ K+ E N
Sbjct: 229 TRKKKQWDVLSTKFSSVKKTQKIGTENIATAYDILKQELNGFKEATFENEIN 280
Score = 25.0 bits (54), Expect = 8.0
Identities = 9/46 (19%), Positives = 14/46 (30%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKK 211
E K++ K +K K N K + +KK
Sbjct: 187 SELPKEQGKLNEKCASKLYYNNMAICMLPLCHDACKSYDQWITRKK 232
>d2d4ca1 a.238.1.1 (A:11-247) Endophilin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 237
Score = 27.0 bits (59), Expect = 1.6
Identities = 8/54 (14%), Positives = 25/54 (46%)
Query: 163 RRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKE 216
+ +K +E + + KK + ++ + KKK++ K ++ ++ + +
Sbjct: 134 QNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEKFDES 187
Score = 26.2 bits (57), Expect = 2.8
Identities = 9/44 (20%), Positives = 21/44 (47%)
Query: 174 KKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEE 217
K ++ + ++ KK E ++ KKK++ K + +R+
Sbjct: 138 DKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQAL 181
Score = 25.1 bits (54), Expect = 6.5
Identities = 9/41 (21%), Positives = 18/41 (43%)
Query: 160 HRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKK 200
+ + KK E ++ KKK+ K E+ ++ +K
Sbjct: 143 EIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEK 183
Score = 24.7 bits (53), Expect = 8.4
Identities = 11/53 (20%), Positives = 28/53 (52%)
Query: 154 DPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKK 206
DP+ N H + ++ + + KK + ++ + KKK++ K ++ ++ +K
Sbjct: 131 DPLQNLHDKDLREIQSALQHHLKKLEGRRLDFDYKKKRQGKIPDEELRQALEK 183
>d1n4ka2 b.42.6.1 (A:236-435) IP3 receptor type 1 binding core,
domain 1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.8 bits (59), Expect = 1.8
Identities = 14/76 (18%), Positives = 21/76 (27%), Gaps = 12/76 (15%)
Query: 29 VRL-HSHDVKYGTGSGQQS----------VTGTEVKEDVNSHWIIKAPTGKTCKRGEPIK 77
VRL H+ K+ T + + W ++ RG
Sbjct: 5 VRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSATSSKALWEVE-VVQHDPCRGGAGY 63
Query: 78 CNDIIRLTHTTTNKNL 93
N + R H T L
Sbjct: 64 WNSLFRFKHLATGHYL 79
>d1d7qa_ b.40.4.5 (A:) Translation initiation factor-1a, eIF1a
{Human (Homo sapiens) [TaxId: 9606]}
Length = 143
Score = 26.4 bits (58), Expect = 1.9
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 189 KKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
K K K K +++ K + + +K++++ KE+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKEDG 31
Score = 24.4 bits (53), Expect = 9.5
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 174 KKKKKKKKKKKKNKKKKKEKKKKKKKKKK 202
K K K K +++ K + + +K++ K+
Sbjct: 2 KNKGKGGKNRRRGKNENESEKRELVFKED 30
>d1fuia2 c.85.1.1 (A:1-355) L-fucose isomerase, N-terminal and
second domains {Escherichia coli [TaxId: 562]}
Length = 355
Score = 27.1 bits (60), Expect = 1.9
Identities = 9/82 (10%), Positives = 30/82 (36%), Gaps = 6/82 (7%)
Query: 138 NPVLWKTMEGIFIHPSDPVANSHRRRRKKEKKKKEEKKKKK---KKKKKKKNKKKKKEKK 194
+ +++ G+ + D RRR ++ + E + K + + K+ +
Sbjct: 193 DHNFFESWLGMKVQAVDMTE--LRRRIDQKIYDEAELEMALAWADKNFRYGEDENNKQYQ 250
Query: 195 KKKKKKKKK-KKKKKKKKIMRK 215
+ ++ + ++ +R
Sbjct: 251 RNAEQSRAVLRESLLMAMCIRD 272
>d3bn0a1 d.27.1.1 (A:2-102) Ribosomal protein S16 {Aquifex aeolicus
[TaxId: 63363]}
Length = 101
Score = 25.6 bits (56), Expect = 2.2
Identities = 4/39 (10%), Positives = 10/39 (25%)
Query: 151 HPSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKK 189
S ++ E + K+ K++
Sbjct: 63 ELSHRAKAILWNHGILKEVVPEGYEMKRVGDYYVFEKRE 101
>d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 138
Score = 26.0 bits (57), Expect = 2.2
Identities = 11/51 (21%), Positives = 25/51 (49%)
Query: 161 RRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKK 211
K K+K +K + K+ ++ + E+ ++K K ++ +K K+ K
Sbjct: 87 NNNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELK 137
Score = 25.6 bits (56), Expect = 2.9
Identities = 12/57 (21%), Positives = 30/57 (52%)
Query: 161 RRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEE 217
R +E +KK E ++++K ++ + K EK++ +++ +K ++ I +E
Sbjct: 40 RDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFIKMAKE 96
Score = 25.2 bits (55), Expect = 4.1
Identities = 9/66 (13%), Positives = 32/66 (48%)
Query: 152 PSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKK 211
P N+ RR+ ++ +KK + ++++K + + + +K++ +++ +K ++
Sbjct: 27 DGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEE 86
Query: 212 IMRKEE 217
+
Sbjct: 87 NNNFIK 92
Score = 24.8 bits (54), Expect = 5.4
Identities = 8/48 (16%), Positives = 23/48 (47%)
Query: 159 SHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKK 206
+ K +K + K+ ++ + ++K+K ++ +K K+ K+
Sbjct: 91 IKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
Score = 24.5 bits (53), Expect = 7.5
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 158 NSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKK 208
N+ + K++ +K E K+ ++ ++ +EK K ++ +K K+ K+
Sbjct: 88 NNFIKMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEEVRKNKELKE 138
>d1ls6a_ c.37.1.5 (A:) Aryl sulfotransferase sult1a {Human (Homo
sapiens) [TaxId: 9606]}
Length = 288
Score = 26.7 bits (58), Expect = 2.3
Identities = 13/122 (10%), Positives = 26/122 (21%), Gaps = 2/122 (1%)
Query: 94 HSHHFSSPLSGAQEVSAYLSATRQTYGRPISGQYEIVTVSWPDHNPVLWKTMEGIFIHPS 153
+ H + + + + G G + W + +
Sbjct: 132 YYHFYHMAKVHPEPGTWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHPVLYLFYEDMKE 191
Query: 154 DPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIM 213
+P + EE + K KK ++ M
Sbjct: 192 NPKREIQKILEFVGHSLPEETVDFMVQHTSFKEMKKN--PMTNYTTVPQEFMDHSISPFM 249
Query: 214 RK 215
RK
Sbjct: 250 RK 251
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I,
dispensable insert domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 72
Score = 25.1 bits (55), Expect = 2.5
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 169 KKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEE 217
+ K + KK++ ++ K K + K K K KK + KKK + R EE
Sbjct: 8 QTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEE 56
>d2lefa_ a.21.1.1 (A:) Lymphoid enhancer-binding factor, LEF1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 86
Score = 25.2 bits (55), Expect = 2.6
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKK 205
+E+ K E +K+++ + KKKK+K++K
Sbjct: 47 EEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
Score = 24.4 bits (53), Expect = 4.2
Identities = 10/48 (20%), Positives = 25/48 (52%)
Query: 162 RRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKK 209
RR ++++ K + +K+++ + + + KKKK+K++K
Sbjct: 39 RRWHALSREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREK 86
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 26.0 bits (57), Expect = 2.7
Identities = 7/50 (14%), Positives = 27/50 (54%)
Query: 169 KKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
+ K K++K + +N +E+ +++++ K ++++ ++ ++E
Sbjct: 85 ECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQEWL 134
>g1tii.1 d.166.1.1 (A:,C:) Heat-labile toxin, A-chain {Escherichia
coli, type IIB [TaxId: 562]}
Length = 223
Score = 26.0 bits (57), Expect = 3.3
Identities = 11/49 (22%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Query: 87 TTTNKNLHSHHFSSPLSGAQEVSAYLSATR-----QTYGRPISGQYEIV 130
T N NL+ H + + Y+S T G+ + G Y
Sbjct: 33 TPININLYDHARGTATGNTRYNDGYVSTTTTLRQAHLLGQNMLGGYNEY 81
>d2j01t1 b.34.5.6 (T:1-138) Ribosomal protein L19 {Thermus
thermophilus [TaxId: 274]}
Length = 138
Score = 25.3 bits (55), Expect = 3.6
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 161 RRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKK 195
R +E ++K +K+ + + + K+E +K
Sbjct: 103 RNLSDREIRRKLRADRKRIDQDRAAERAAKEEAQK 137
>d1f3ub_ b.65.1.1 (B:) TFIIF alpha subunit, Rap74 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 25.6 bits (56), Expect = 3.6
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 163 RRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
R KK +E++ + + N+K ++E ++KK K+ + + +
Sbjct: 45 RDLSNKKIYQEEEMPESGAGSEFNRKLREEARRKKYGIVLKEFRPEDQ 92
>d1zroa2 a.264.1.1 (A:283-596) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 314
Score = 26.2 bits (57), Expect = 3.7
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 168 KKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKI 212
KKKEE K+ K+ ++ + K + K K + KK +K
Sbjct: 248 SKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKC 292
Score = 25.8 bits (56), Expect = 3.9
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 167 EKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
KKK+E K+ K+ ++ +K K + K K + KK +K
Sbjct: 248 SKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEK 291
Score = 25.4 bits (55), Expect = 6.5
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 165 KKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
K+ K+ +E +K K + K K E KK +K + +
Sbjct: 255 NKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDE 300
Score = 25.0 bits (54), Expect = 7.7
Identities = 8/51 (15%), Positives = 22/51 (43%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKE 216
++ ++ +K K + K+ K + KK +K + + K+ + +
Sbjct: 258 AKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSD 308
Score = 25.0 bits (54), Expect = 7.8
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
KEK +++ K+K K+ KKK+E K+ K+ ++ +K K +
Sbjct: 227 KEKPCEDDNCKRKCNSYKEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSI 279
Score = 25.0 bits (54), Expect = 8.2
Identities = 10/51 (19%), Positives = 22/51 (43%)
Query: 162 RRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKI 212
++K+E K+ ++ ++ +K K + K K + KK +K
Sbjct: 248 SKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFE 298
>d1twfa_ e.29.1.2 (A:) RBP1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 1449
Score = 26.3 bits (57), Expect = 4.0
Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Query: 141 LWKTMEGIFIHPSDPVANSHRRRRKKEKKKKEEKKKKKK---KKKKKKNKKKKKEKKKKK 197
+ K E + +H + + H ++ K+ KK+ K K + +
Sbjct: 98 IKKVCECVCMHCGKLLLDEHNELMRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDP 157
Query: 198 KKKKKKKKKKKKKKIMRKE 216
+ + + +RK+
Sbjct: 158 TQLVSRGGCGNTQPTIRKD 176
>d1is1a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Vibrio
parahaemolyticus [TaxId: 670]}
Length = 185
Score = 25.7 bits (56), Expect = 4.0
Identities = 13/58 (22%), Positives = 27/58 (46%)
Query: 156 VANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIM 213
VA + RR K K K+ + + +K +++ ++ KK + K+K++M
Sbjct: 126 VAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKELM 183
>d1yz1a1 b.88.1.2 (A:1-172) Translationally controlled tumor protein
TCTP (histamine-releasing factor) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 172
Score = 25.4 bits (56), Expect = 4.1
Identities = 8/36 (22%), Positives = 16/36 (44%)
Query: 180 KKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRK 215
K K K K +E++ ++ K ++ K I+
Sbjct: 93 KDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILAN 128
>d1vqob1 b.43.3.2 (B:1-337) Ribosomal protein L3 {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 337
Score = 25.8 bits (56), Expect = 4.3
Identities = 4/53 (7%), Positives = 13/53 (24%)
Query: 159 SHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKK 211
R + + + +++ + + + KKK
Sbjct: 106 HSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKK 158
>d1kcfa2 c.55.3.7 (A:39-256) Mitochondrial resolvase ydc2 catalytic
domain {Fission yeast (Schizosaccharomyces pombe)
[TaxId: 4896]}
Length = 218
Score = 25.8 bits (56), Expect = 4.3
Identities = 7/60 (11%), Positives = 17/60 (28%)
Query: 159 SHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
+ K+ +++ + K K KKK + + K + +
Sbjct: 106 ALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQK 165
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
PAC) {Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 25.4 bits (55), Expect = 6.4
Identities = 8/53 (15%), Positives = 18/53 (33%)
Query: 166 KEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIMRKEEN 218
++ K K + ++ K E +K K + + + + E N
Sbjct: 1 QKDLADYPVKLKAYEDEQASIKAALAELEKHKNEDGNLTEPSAQNLVYDLEPN 53
>d3dy8a1 a.211.1.2 (A:182-505) High-affinity cGMP-specific
3',5'-cyclic phosphodiesterase 9A, PDE9A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 324
Score = 25.4 bits (55), Expect = 7.0
Identities = 6/42 (14%), Positives = 18/42 (42%)
Query: 141 LWKTMEGIFIHPSDPVANSHRRRRKKEKKKKEEKKKKKKKKK 182
+++T+ +F + + R + ++ K K+ +K
Sbjct: 283 MFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK 324
>d2efla1 a.238.1.4 (A:1-288) Formin-binding protein 1, FNBP1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 24.8 bits (53), Expect = 8.2
Identities = 8/73 (10%), Positives = 26/73 (35%)
Query: 143 KTMEGIFIHPSDPVANSHRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKK 202
+ M I ++ RK + ++ + K+ K++ ++ K+ +
Sbjct: 92 ENMASQIIVDLARYVQELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCKEADRA 151
Query: 203 KKKKKKKKKIMRK 215
++ +K +
Sbjct: 152 QQYFEKMDADINV 164
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase
{Clostridium thermocellum [TaxId: 1515]}
Length = 164
Score = 24.6 bits (53), Expect = 8.6
Identities = 8/40 (20%), Positives = 13/40 (32%)
Query: 168 KKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKK 207
K K +K KK+ + K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
Score = 24.6 bits (53), Expect = 9.0
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 169 KKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKK 208
K K +K KK+ ++K K + +K K
Sbjct: 8 TKSWNIKNAQKFKKENESKYNTTIITNKDELTFEKVKLIN 47
>d1ek8a_ d.67.3.1 (A:) Ribosome recycling factor, RRF {Escherichia
coli [TaxId: 562]}
Length = 185
Score = 24.6 bits (53), Expect = 9.5
Identities = 10/54 (18%), Positives = 24/54 (44%)
Query: 160 HRRRRKKEKKKKEEKKKKKKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKKKIM 213
+ RR +K K K K+ + ++++ ++ KK + K+ ++M
Sbjct: 130 NVRRDANDKVKALLKDKEISEDDDRRSQDDVQKLTDAAIKKIEAALADKEAELM 183
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 96
Score = 23.9 bits (52), Expect = 9.6
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 178 KKKKKKKKNKKKKKEKKKKKKKKKKKKKKKKKK 210
KK +K ++ KKK ++ + K+K K
Sbjct: 58 DKKIDIQKGASDEEVKKKLEESNLTEYMKEKIK 90
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.310 0.126 0.360
Gapped
Lambda K H
0.267 0.0595 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 837,524
Number of extensions: 44642
Number of successful extensions: 2410
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1382
Number of HSP's successfully gapped: 531
Length of query: 218
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 136
Effective length of database: 1,281,736
Effective search space: 174316096
Effective search space used: 174316096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 51 (23.7 bits)