Query psy17902
Match_columns 454
No_of_seqs 939 out of 2546
Neff 11.3
Searched_HMMs 29240
Date Fri Aug 16 17:04:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.1E-49 3.9E-54 374.2 39.5 287 132-438 100-409 (410)
2 1got_B GT-beta; complex (GTP-b 100.0 6.4E-48 2.2E-52 353.4 42.2 287 132-437 47-340 (340)
3 2pbi_B Guanine nucleotide-bind 100.0 3.9E-47 1.3E-51 349.8 45.4 289 131-437 55-354 (354)
4 3ow8_A WD repeat-containing pr 100.0 2.8E-47 9.4E-52 345.8 39.6 289 132-438 24-319 (321)
5 2ynn_A Coatomer subunit beta'; 100.0 1.6E-47 5.5E-52 345.1 37.2 287 132-439 5-301 (304)
6 3iz6_a 40S ribosomal protein R 100.0 9.1E-47 3.1E-51 351.1 34.1 300 131-441 57-376 (380)
7 4ery_A WD repeat-containing pr 100.0 6.5E-45 2.2E-49 329.6 43.2 295 128-438 11-310 (312)
8 4g56_B MGC81050 protein; prote 100.0 5.3E-46 1.8E-50 342.5 35.6 287 141-443 41-346 (357)
9 4gqb_B Methylosome protein 50; 100.0 2.1E-46 7E-51 342.5 32.6 287 141-441 29-332 (344)
10 3frx_A Guanine nucleotide-bind 100.0 6.1E-45 2.1E-49 330.4 40.3 295 131-441 8-318 (319)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.9E-45 1.7E-49 334.8 38.9 306 132-443 7-338 (345)
12 2hes_X YDR267CP; beta-propelle 100.0 5.7E-44 1.9E-48 325.6 39.9 290 132-440 6-328 (330)
13 2xzm_R RACK1; ribosome, transl 100.0 1.2E-43 4.3E-48 325.4 40.8 295 132-441 13-341 (343)
14 1erj_A Transcriptional repress 100.0 6.9E-43 2.4E-47 326.4 40.9 296 141-441 63-390 (393)
15 1nr0_A Actin interacting prote 100.0 3.8E-43 1.3E-47 346.7 39.9 293 133-442 140-569 (611)
16 4aow_A Guanine nucleotide-bind 100.0 1E-41 3.4E-46 312.4 42.1 298 131-443 29-340 (340)
17 2ymu_A WD-40 repeat protein; u 100.0 3.7E-42 1.3E-46 338.4 41.4 282 132-437 295-577 (577)
18 1gxr_A ESG1, transducin-like e 100.0 3.6E-41 1.2E-45 308.2 42.9 283 141-439 50-336 (337)
19 3ei3_B DNA damage-binding prot 100.0 1.1E-41 3.7E-46 317.7 39.9 298 132-440 65-382 (383)
20 3i2n_A WD repeat-containing pr 100.0 2.1E-42 7.2E-47 319.1 33.1 302 127-441 5-354 (357)
21 3k26_A Polycomb protein EED; W 100.0 1.5E-42 5.3E-47 321.1 32.3 292 134-439 12-365 (366)
22 1nr0_A Actin interacting prote 100.0 8.4E-42 2.9E-46 337.1 39.2 292 132-441 51-356 (611)
23 3zwl_B Eukaryotic translation 100.0 4.8E-41 1.6E-45 311.3 41.5 292 128-441 20-347 (369)
24 3odt_A Protein DOA1; ubiquitin 100.0 3.9E-41 1.3E-45 304.8 38.2 285 131-443 9-299 (313)
25 1sq9_A Antiviral protein SKI8; 100.0 1.1E-41 3.6E-46 319.2 35.2 304 132-441 8-396 (397)
26 1r5m_A SIR4-interacting protei 100.0 2E-41 6.7E-46 320.1 35.9 287 141-439 44-424 (425)
27 3dm0_A Maltose-binding peripla 100.0 5E-41 1.7E-45 336.9 40.5 295 130-439 372-692 (694)
28 2ynn_A Coatomer subunit beta'; 100.0 5.9E-41 2E-45 302.1 35.5 244 188-442 11-261 (304)
29 3ow8_A WD repeat-containing pr 100.0 1.8E-40 6.3E-45 300.9 36.4 246 132-394 72-320 (321)
30 2ymu_A WD-40 repeat protein; u 100.0 7.7E-40 2.6E-44 321.9 43.0 283 132-438 254-537 (577)
31 1vyh_C Platelet-activating fac 100.0 1.5E-40 5.3E-45 312.1 35.1 245 132-393 142-409 (410)
32 1k8k_C P40, ARP2/3 complex 41 100.0 4.4E-40 1.5E-44 305.4 35.2 283 141-441 7-362 (372)
33 4e54_B DNA damage-binding prot 100.0 1.3E-40 4.3E-45 315.5 30.8 295 134-441 113-431 (435)
34 4aez_A CDC20, WD repeat-contai 100.0 1.1E-39 3.6E-44 305.9 36.7 282 141-442 90-382 (401)
35 3gre_A Serine/threonine-protei 100.0 2.9E-40 1E-44 313.5 33.0 298 131-437 53-437 (437)
36 3frx_A Guanine nucleotide-bind 100.0 1.5E-39 5.2E-44 294.9 35.5 257 131-396 56-318 (319)
37 3vl1_A 26S proteasome regulato 100.0 1.3E-39 4.6E-44 307.3 35.5 279 144-440 58-365 (420)
38 1yfq_A Cell cycle arrest prote 100.0 8.7E-40 3E-44 299.8 33.2 295 141-450 10-337 (342)
39 4gqb_B Methylosome protein 50; 100.0 1.4E-39 4.8E-44 297.3 33.4 243 141-396 81-332 (344)
40 2pm9_A Protein WEB1, protein t 100.0 1.4E-40 4.8E-45 313.5 27.5 285 141-441 66-415 (416)
41 2pm9_A Protein WEB1, protein t 100.0 2.2E-40 7.7E-45 312.2 28.5 287 141-442 11-339 (416)
42 3mkq_A Coatomer beta'-subunit; 100.0 2E-39 6.7E-44 331.9 36.0 289 132-440 5-302 (814)
43 3dwl_C Actin-related protein 2 100.0 2.1E-40 7.1E-45 308.3 24.8 281 141-438 10-377 (377)
44 3vl1_A 26S proteasome regulato 100.0 9.1E-39 3.1E-43 301.6 36.2 279 143-439 98-418 (420)
45 1got_B GT-beta; complex (GTP-b 100.0 3.9E-38 1.3E-42 288.4 37.8 244 188-442 53-303 (340)
46 4gga_A P55CDC, cell division c 100.0 4.1E-38 1.4E-42 296.9 39.1 276 144-440 107-395 (420)
47 2pm7_B Protein transport prote 100.0 2.5E-38 8.5E-43 284.0 35.7 251 134-396 3-286 (297)
48 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.7E-37 5.9E-42 295.1 41.0 285 132-442 151-444 (445)
49 3sfz_A APAF-1, apoptotic pepti 100.0 2.8E-38 9.5E-43 337.4 39.7 289 131-439 606-912 (1249)
50 2xzm_R RACK1; ribosome, transl 100.0 3.5E-38 1.2E-42 289.2 34.6 256 132-396 68-341 (343)
51 3mmy_A MRNA export factor; mRN 100.0 3.5E-38 1.2E-42 291.9 34.6 307 129-449 28-356 (368)
52 2hes_X YDR267CP; beta-propelle 100.0 3.3E-38 1.1E-42 287.6 33.7 247 141-395 57-328 (330)
53 1gxr_A ESG1, transducin-like e 100.0 1.3E-38 4.3E-43 291.3 31.1 281 141-442 8-298 (337)
54 4ggc_A P55CDC, cell division c 100.0 2.5E-37 8.5E-42 280.4 39.2 275 145-440 28-315 (318)
55 3v7d_B Cell division control p 100.0 2.4E-37 8.4E-42 295.8 41.2 281 132-438 154-461 (464)
56 2pm7_B Protein transport prote 100.0 4.2E-38 1.4E-42 282.5 33.4 247 188-440 7-285 (297)
57 4h5i_A Guanine nucleotide-exch 100.0 6.2E-39 2.1E-43 296.1 28.6 289 142-443 14-346 (365)
58 4a11_B DNA excision repair pro 100.0 1.2E-37 4.1E-42 292.6 37.8 301 133-442 36-367 (408)
59 4g56_B MGC81050 protein; prote 100.0 1.5E-38 5.2E-43 292.7 30.7 248 134-396 88-344 (357)
60 3v7d_B Cell division control p 100.0 2.3E-37 7.9E-42 296.0 40.0 282 132-442 113-423 (464)
61 3dw8_B Serine/threonine-protei 100.0 1.8E-38 6.3E-43 302.0 32.0 294 141-438 27-444 (447)
62 2pbi_B Guanine nucleotide-bind 100.0 1.1E-37 3.8E-42 286.7 35.8 245 188-442 62-317 (354)
63 1p22_A F-BOX/WD-repeat protein 100.0 6.2E-38 2.1E-42 297.2 34.9 272 141-443 132-417 (435)
64 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-36 4E-41 289.4 42.7 281 132-443 110-394 (445)
65 3fm0_A Protein CIAO1; WDR39,SG 100.0 8E-38 2.8E-42 286.8 32.6 254 136-401 57-341 (345)
66 3jrp_A Fusion protein of prote 100.0 2.2E-37 7.7E-42 287.8 35.0 252 133-396 4-288 (379)
67 4aow_A Guanine nucleotide-bind 100.0 6.2E-37 2.1E-41 280.5 36.3 275 115-397 60-339 (340)
68 4ery_A WD repeat-containing pr 100.0 1.7E-36 5.9E-41 274.3 36.9 247 187-442 20-270 (312)
69 3iz6_a 40S ribosomal protein R 100.0 1.7E-37 5.8E-42 288.6 30.2 259 132-397 100-377 (380)
70 3sfz_A APAF-1, apoptotic pepti 100.0 1.6E-37 5.6E-42 331.5 34.3 297 132-442 735-1160(1249)
71 2aq5_A Coronin-1A; WD40 repeat 100.0 3.9E-37 1.3E-41 288.7 31.9 290 143-445 35-347 (402)
72 2oaj_A Protein SNI1; WD40 repe 100.0 3.2E-37 1.1E-41 315.3 33.7 159 141-308 57-246 (902)
73 1pgu_A Actin interacting prote 100.0 1.2E-36 3.9E-41 301.5 36.5 271 131-419 54-349 (615)
74 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-37 8.5E-42 283.8 29.4 295 133-443 4-340 (351)
75 1pgu_A Actin interacting prote 100.0 3.8E-36 1.3E-40 297.7 39.8 287 132-440 152-614 (615)
76 3bg1_A Protein SEC13 homolog; 100.0 1E-37 3.6E-42 282.4 26.1 245 134-395 7-293 (316)
77 1erj_A Transcriptional repress 100.0 1.9E-36 6.5E-41 282.8 35.1 239 141-395 122-389 (393)
78 3dm0_A Maltose-binding peripla 100.0 1.2E-36 4.1E-41 305.2 36.0 255 132-394 422-692 (694)
79 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-36 7.3E-41 309.2 37.9 200 136-347 13-245 (902)
80 2j04_B YDR362CP, TAU91; beta p 100.0 1.9E-37 6.7E-42 297.1 28.0 295 134-442 201-519 (524)
81 3bg1_A Protein SEC13 homolog; 100.0 2.8E-37 9.7E-42 279.6 26.5 241 188-440 11-293 (316)
82 3jrp_A Fusion protein of prote 100.0 5.9E-36 2E-40 278.1 32.3 248 188-441 9-288 (379)
83 3jro_A Fusion protein of prote 100.0 4E-36 1.4E-40 303.1 28.8 250 134-395 3-285 (753)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3E-35 1E-39 279.9 33.3 295 142-441 4-392 (450)
85 2j04_A TAU60, YPL007P, hypothe 100.0 9.6E-36 3.3E-40 278.3 28.8 293 141-451 14-373 (588)
86 4gga_A P55CDC, cell division c 100.0 7.4E-35 2.5E-39 274.7 35.1 252 135-403 140-403 (420)
87 4aez_A CDC20, WD repeat-contai 100.0 9.2E-35 3.2E-39 272.3 34.4 248 141-403 133-388 (401)
88 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-36 4.5E-41 291.3 21.8 260 141-440 132-428 (524)
89 3mkq_A Coatomer beta'-subunit; 100.0 1.6E-34 5.4E-39 295.6 36.5 288 132-439 47-385 (814)
90 3ei3_B DNA damage-binding prot 100.0 7.3E-35 2.5E-39 271.4 30.2 241 141-395 117-382 (383)
91 3k26_A Polycomb protein EED; W 100.0 3.4E-35 1.1E-39 271.7 27.6 251 133-394 60-365 (366)
92 1sq9_A Antiviral protein SKI8; 100.0 8.4E-35 2.9E-39 272.4 30.3 256 132-396 54-396 (397)
93 4e54_B DNA damage-binding prot 100.0 1.3E-35 4.5E-40 281.0 25.1 252 132-398 156-433 (435)
94 1k8k_C P40, ARP2/3 complex 41 100.0 2.3E-34 7.8E-39 266.9 31.1 260 132-397 44-363 (372)
95 2xyi_A Probable histone-bindin 100.0 3.1E-34 1.1E-38 271.1 31.9 241 188-440 126-410 (430)
96 3zwl_B Eukaryotic translation 100.0 5.4E-34 1.8E-38 263.8 32.7 249 132-398 66-349 (369)
97 3dwl_C Actin-related protein 2 100.0 1.1E-35 3.7E-40 276.5 21.1 243 189-439 10-280 (377)
98 3vu4_A KMHSV2; beta-propeller 100.0 7.1E-34 2.4E-38 261.5 32.6 288 135-450 14-346 (355)
99 4a11_B DNA excision repair pro 100.0 4.1E-34 1.4E-38 268.5 30.9 278 141-439 98-404 (408)
100 3bws_A Protein LP49; two-domai 100.0 2.7E-33 9.1E-38 265.3 36.5 282 143-439 123-431 (433)
101 3odt_A Protein DOA1; ubiquitin 100.0 5E-33 1.7E-37 251.4 35.7 251 131-402 50-303 (313)
102 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-34 6.4E-39 264.4 25.2 269 149-442 43-335 (343)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 2.6E-34 8.8E-39 269.5 26.4 273 115-398 56-345 (402)
104 1r5m_A SIR4-interacting protei 100.0 9.8E-34 3.4E-38 267.3 30.6 257 165-441 26-320 (425)
105 3gre_A Serine/threonine-protei 100.0 1.5E-34 5.2E-39 274.2 24.3 272 149-443 34-362 (437)
106 3dw8_B Serine/threonine-protei 100.0 8.1E-34 2.8E-38 270.0 28.5 251 188-443 26-376 (447)
107 3jro_A Fusion protein of prote 100.0 4.2E-34 1.4E-38 288.4 28.0 248 187-440 6-285 (753)
108 1yfq_A Cell cycle arrest prote 100.0 8.4E-34 2.9E-38 260.0 27.4 244 188-442 9-284 (342)
109 3i2n_A WD repeat-containing pr 100.0 1.4E-33 4.9E-38 259.9 28.5 250 141-397 64-355 (357)
110 2xyi_A Probable histone-bindin 100.0 1.5E-33 5.2E-38 266.4 29.3 257 132-396 120-411 (430)
111 1p22_A F-BOX/WD-repeat protein 100.0 3E-33 1E-37 265.0 30.0 256 132-418 165-434 (435)
112 4ggc_A P55CDC, cell division c 100.0 7.4E-32 2.5E-36 244.3 35.2 247 134-397 59-317 (318)
113 4gq1_A NUP37; propeller, trans 100.0 2.9E-33 9.9E-38 261.1 24.7 240 195-439 94-388 (393)
114 1l0q_A Surface layer protein; 100.0 2.1E-31 7.3E-36 248.7 36.7 265 155-441 3-276 (391)
115 4h5i_A Guanine nucleotide-exch 100.0 7.7E-33 2.6E-37 255.3 25.3 248 135-396 68-344 (365)
116 3mmy_A MRNA export factor; mRN 100.0 2.7E-31 9.3E-36 245.6 32.5 242 188-441 37-305 (368)
117 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-30 3.8E-35 248.4 31.7 238 191-438 5-337 (450)
118 1l0q_A Surface layer protein; 100.0 2.4E-29 8.3E-34 234.8 40.0 251 132-404 24-284 (391)
119 4gq1_A NUP37; propeller, trans 100.0 1E-31 3.5E-36 250.6 23.2 243 141-394 88-388 (393)
120 3f3f_A Nucleoporin SEH1; struc 100.0 6.1E-31 2.1E-35 241.1 28.0 278 115-403 32-345 (351)
121 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-30 8.8E-35 237.7 28.1 235 188-442 17-273 (355)
122 2w18_A PALB2, fancn, partner a 100.0 4.8E-30 1.6E-34 225.5 26.4 275 145-438 42-355 (356)
123 2j04_A TAU60, YPL007P, hypothe 100.0 2.8E-30 9.4E-35 241.6 25.5 231 189-439 14-296 (588)
124 3lrv_A PRE-mRNA-splicing facto 100.0 2.8E-30 9.5E-35 236.6 23.8 232 198-443 44-295 (343)
125 3bws_A Protein LP49; two-domai 100.0 7.6E-29 2.6E-33 234.7 32.7 281 141-441 59-391 (433)
126 2w18_A PALB2, fancn, partner a 100.0 1.3E-29 4.4E-34 222.8 23.7 248 132-393 78-355 (356)
127 1nir_A Nitrite reductase; hemo 100.0 4.1E-27 1.4E-31 227.4 35.1 281 145-442 181-516 (543)
128 2hqs_A Protein TOLB; TOLB, PAL 100.0 7.2E-28 2.5E-32 225.9 26.0 280 142-440 62-387 (415)
129 2ecf_A Dipeptidyl peptidase IV 100.0 4E-27 1.4E-31 238.2 30.5 290 141-440 35-413 (741)
130 2hqs_A Protein TOLB; TOLB, PAL 100.0 6.2E-27 2.1E-31 219.5 27.3 268 130-421 107-410 (415)
131 1nir_A Nitrite reductase; hemo 100.0 3.3E-26 1.1E-30 221.0 29.7 279 149-443 144-461 (543)
132 3vgz_A Uncharacterized protein 100.0 4.3E-25 1.5E-29 202.9 35.8 268 141-429 39-334 (353)
133 3u4y_A Uncharacterized protein 100.0 1.2E-25 4.2E-30 204.7 30.6 275 149-441 4-305 (331)
134 1ri6_A Putative isomerase YBHE 99.9 4.8E-25 1.6E-29 201.6 32.0 273 155-440 5-308 (343)
135 1pby_B Quinohemoprotein amine 99.9 7.9E-25 2.7E-29 199.6 27.5 264 155-442 2-312 (337)
136 2z3z_A Dipeptidyl aminopeptida 99.9 1.4E-24 4.7E-29 218.4 31.2 278 142-442 81-437 (706)
137 2ojh_A Uncharacterized protein 99.9 3E-25 1E-29 198.3 23.6 254 159-431 17-294 (297)
138 1xfd_A DIP, dipeptidyl aminope 99.9 5.9E-25 2E-29 221.7 22.8 280 143-440 17-393 (723)
139 2ecf_A Dipeptidyl peptidase IV 99.9 1.8E-23 6E-28 211.5 31.2 273 144-438 110-457 (741)
140 1k32_A Tricorn protease; prote 99.9 8.2E-24 2.8E-28 221.2 28.7 279 133-438 196-500 (1045)
141 1k32_A Tricorn protease; prote 99.9 1.4E-23 4.9E-28 219.4 30.4 285 141-442 294-639 (1045)
142 2oit_A Nucleoporin 214KDA; NH2 99.9 4.5E-23 1.5E-27 193.9 30.5 203 141-345 35-279 (434)
143 1xfd_A DIP, dipeptidyl aminope 99.9 4.1E-23 1.4E-27 208.3 32.0 282 134-431 51-432 (723)
144 1ri6_A Putative isomerase YBHE 99.9 3.3E-23 1.1E-27 189.4 28.2 264 141-421 36-335 (343)
145 3hfq_A Uncharacterized protein 99.9 1.2E-22 3.9E-27 186.3 31.5 276 156-440 4-317 (347)
146 2z3z_A Dipeptidyl aminopeptida 99.9 1.1E-23 3.6E-28 212.0 23.8 282 145-439 28-390 (706)
147 1jmx_B Amine dehydrogenase; ox 99.9 1.1E-22 3.9E-27 186.3 28.5 262 147-441 4-326 (349)
148 3o4h_A Acylamino-acid-releasin 99.9 7.1E-23 2.4E-27 201.1 25.0 267 141-437 20-312 (582)
149 2ojh_A Uncharacterized protein 99.9 3.5E-22 1.2E-26 178.3 25.5 236 134-386 35-293 (297)
150 3vgz_A Uncharacterized protein 99.9 4.5E-21 1.5E-25 176.0 32.3 242 191-442 41-305 (353)
151 3u4y_A Uncharacterized protein 99.9 2.6E-21 9E-26 176.0 29.8 238 197-443 4-255 (331)
152 3scy_A Hypothetical bacterial 99.9 6.6E-21 2.3E-25 175.6 30.9 271 152-439 11-336 (361)
153 3pe7_A Oligogalacturonate lyas 99.9 1.8E-21 6E-26 181.2 26.5 291 132-439 22-381 (388)
154 2oit_A Nucleoporin 214KDA; NH2 99.9 2.2E-21 7.6E-26 182.4 27.3 245 192-440 38-333 (434)
155 1pby_B Quinohemoprotein amine 99.9 2.3E-21 8E-26 176.6 25.4 244 144-404 35-319 (337)
156 3hfq_A Uncharacterized protein 99.9 2.1E-20 7.2E-25 171.2 28.1 245 141-399 38-323 (347)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 4E-20 1.4E-24 170.4 28.5 278 156-441 4-342 (365)
158 1z68_A Fibroblast activation p 99.9 1.7E-21 5.7E-26 196.3 20.5 274 147-440 20-391 (719)
159 3scy_A Hypothetical bacterial 99.9 1.3E-19 4.6E-24 166.8 31.2 261 141-417 48-360 (361)
160 1z68_A Fibroblast activation p 99.9 1.7E-20 5.8E-25 189.0 23.3 279 144-441 61-444 (719)
161 3o4h_A Acylamino-acid-releasin 99.9 1.2E-20 4.1E-25 185.2 21.4 231 190-438 21-274 (582)
162 4a5s_A Dipeptidyl peptidase 4 99.9 3.1E-20 1.1E-24 187.2 22.9 288 142-439 16-352 (740)
163 3c5m_A Oligogalacturonate lyas 99.9 4.9E-20 1.7E-24 171.9 22.1 274 144-439 37-381 (396)
164 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.5E-19 5.2E-24 166.6 24.3 244 141-396 38-342 (365)
165 1q7f_A NHL, brain tumor CG1071 99.9 4.4E-18 1.5E-22 151.2 32.7 245 141-396 28-281 (286)
166 3fvz_A Peptidyl-glycine alpha- 99.8 5.3E-18 1.8E-22 153.8 33.0 243 141-395 22-322 (329)
167 2gop_A Trilobed protease; beta 99.8 5.8E-18 2E-22 154.9 30.6 259 142-439 14-330 (347)
168 2oiz_A Aromatic amine dehydrog 99.8 1.5E-18 5.1E-23 159.2 25.8 271 153-441 14-335 (361)
169 2oiz_A Aromatic amine dehydrog 99.8 2.6E-18 9E-23 157.6 27.0 267 134-421 45-360 (361)
170 3azo_A Aminopeptidase; POP fam 99.8 2.6E-18 8.8E-23 171.4 28.9 292 133-439 16-366 (662)
171 2dg1_A DRP35, lactonase; beta 99.8 4.5E-18 1.6E-22 154.7 26.9 274 142-429 5-300 (333)
172 2xdw_A Prolyl endopeptidase; a 99.8 1.9E-17 6.6E-22 166.1 33.5 245 189-442 123-416 (710)
173 1q7f_A NHL, brain tumor CG1071 99.8 2.6E-17 8.8E-22 146.3 30.6 242 188-441 27-281 (286)
174 1jmx_B Amine dehydrogenase; ox 99.8 1.3E-18 4.5E-23 159.2 22.1 245 144-404 44-334 (349)
175 3fvz_A Peptidyl-glycine alpha- 99.8 4.7E-17 1.6E-21 147.5 29.9 243 189-440 22-322 (329)
176 2bkl_A Prolyl endopeptidase; m 99.8 2.2E-17 7.6E-22 165.2 28.2 280 152-442 77-399 (695)
177 3pe7_A Oligogalacturonate lyas 99.8 1E-17 3.6E-22 155.7 23.7 239 196-442 41-331 (388)
178 2z2n_A Virginiamycin B lyase; 99.8 7.2E-15 2.5E-19 131.1 39.7 277 141-440 13-295 (299)
179 3azo_A Aminopeptidase; POP fam 99.8 5E-17 1.7E-21 162.1 26.5 252 133-399 60-373 (662)
180 3no2_A Uncharacterized protein 99.8 3.1E-16 1E-20 137.8 27.7 251 153-416 4-273 (276)
181 4a5s_A Dipeptidyl peptidase 4 99.8 3.4E-16 1.2E-20 157.8 31.8 265 146-429 65-436 (740)
182 3dsm_A Uncharacterized protein 99.8 6.2E-16 2.1E-20 139.9 30.3 264 162-439 15-301 (328)
183 3c5m_A Oligogalacturonate lyas 99.8 4.4E-17 1.5E-21 151.8 20.0 238 192-442 37-331 (396)
184 1qks_A Cytochrome CD1 nitrite 99.8 8.4E-15 2.9E-19 141.1 36.1 281 144-441 198-539 (567)
185 1rwi_B Serine/threonine-protei 99.8 7.3E-16 2.5E-20 135.5 26.0 238 144-397 25-266 (270)
186 3e5z_A Putative gluconolactona 99.8 8E-16 2.7E-20 137.3 26.6 222 189-427 26-275 (296)
187 2xdw_A Prolyl endopeptidase; a 99.7 3.5E-16 1.2E-20 157.0 26.6 240 141-397 123-416 (710)
188 1yr2_A Prolyl oligopeptidase; 99.7 8.6E-16 3E-20 154.8 27.4 279 152-441 116-442 (741)
189 3e5z_A Putative gluconolactona 99.7 3.3E-15 1.1E-19 133.3 28.2 240 132-396 19-287 (296)
190 2bkl_A Prolyl endopeptidase; m 99.7 1.7E-16 5.8E-21 158.8 22.0 241 141-397 119-399 (695)
191 2mad_H Methylamine dehydrogena 99.7 3.6E-14 1.2E-18 130.2 35.1 278 149-443 27-353 (373)
192 3sjl_D Methylamine dehydrogena 99.7 3.7E-15 1.3E-19 134.7 26.5 281 148-442 38-365 (386)
193 1qks_A Cytochrome CD1 nitrite 99.7 2.9E-14 9.8E-19 137.4 33.8 274 152-441 165-478 (567)
194 2dg1_A DRP35, lactonase; beta 99.7 1.9E-14 6.5E-19 130.7 30.8 240 133-386 37-301 (333)
195 2qc5_A Streptogramin B lactona 99.7 2.4E-13 8.2E-18 121.2 37.5 275 141-438 18-298 (300)
196 1rwi_B Serine/threonine-protei 99.7 4.9E-15 1.7E-19 130.2 25.6 237 192-441 25-265 (270)
197 3no2_A Uncharacterized protein 99.7 1.5E-14 5.3E-19 126.9 28.1 211 201-426 4-230 (276)
198 2gop_A Trilobed protease; beta 99.7 3.6E-15 1.2E-19 136.2 23.5 227 144-403 60-337 (347)
199 3dsm_A Uncharacterized protein 99.7 4.4E-14 1.5E-18 127.8 29.5 251 143-417 44-320 (328)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 4.1E-14 1.4E-18 127.2 29.1 239 191-440 18-299 (314)
201 2z2n_A Virginiamycin B lyase; 99.7 1.5E-12 5.1E-17 116.0 34.5 235 189-438 13-253 (299)
202 3sjl_D Methylamine dehydrogena 99.7 6.7E-14 2.3E-18 126.6 25.4 256 147-419 82-384 (386)
203 3c75_H MADH, methylamine dehyd 99.7 3.1E-14 1.1E-18 131.2 23.6 276 152-442 82-404 (426)
204 1yr2_A Prolyl oligopeptidase; 99.6 1.4E-14 4.6E-19 146.1 23.0 240 141-397 161-443 (741)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 7.3E-13 2.5E-17 119.0 29.2 241 141-396 16-300 (314)
206 1xip_A Nucleoporin NUP159; bet 99.6 3.3E-14 1.1E-18 129.1 18.6 173 233-426 39-231 (388)
207 3hrp_A Uncharacterized protein 99.6 2.6E-12 8.9E-17 119.5 29.0 245 190-438 130-408 (409)
208 3g4e_A Regucalcin; six bladed 99.6 5.3E-12 1.8E-16 112.4 29.9 228 192-430 14-263 (297)
209 2mad_H Methylamine dehydrogena 99.6 1.2E-11 4E-16 113.4 32.6 241 147-402 70-357 (373)
210 3hrp_A Uncharacterized protein 99.6 2.6E-12 8.8E-17 119.5 28.1 242 143-393 131-408 (409)
211 2qe8_A Uncharacterized protein 99.5 4E-12 1.4E-16 115.7 26.0 272 143-437 17-318 (343)
212 3dr2_A Exported gluconolactona 99.5 3.1E-12 1.1E-16 114.4 24.6 223 141-386 43-298 (305)
213 1xip_A Nucleoporin NUP159; bet 99.5 4.4E-13 1.5E-17 121.8 18.2 178 192-381 39-230 (388)
214 2qc5_A Streptogramin B lactona 99.5 6.8E-11 2.3E-15 105.2 32.5 234 190-438 19-258 (300)
215 2ghs_A AGR_C_1268P; regucalcin 99.5 2.9E-11 9.9E-16 109.1 30.1 226 192-431 50-294 (326)
216 3iuj_A Prolyl endopeptidase; h 99.5 2.2E-12 7.6E-17 128.7 24.5 240 189-442 127-407 (693)
217 1mda_H Methylamine dehydrogena 99.5 6.1E-13 2.1E-17 120.6 18.5 255 165-441 47-347 (368)
218 3c75_H MADH, methylamine dehyd 99.5 4.4E-12 1.5E-16 116.9 24.1 242 147-402 122-409 (426)
219 3g4e_A Regucalcin; six bladed 99.5 6.7E-11 2.3E-15 105.2 30.5 223 141-384 11-261 (297)
220 3iuj_A Prolyl endopeptidase; h 99.5 2.6E-12 8.9E-17 128.2 22.7 238 141-397 127-407 (693)
221 3dr2_A Exported gluconolactona 99.5 1.9E-11 6.6E-16 109.2 25.8 222 190-427 44-295 (305)
222 3q7m_A Lipoprotein YFGL, BAMB; 99.5 1.7E-10 5.7E-15 106.4 29.9 267 154-442 53-339 (376)
223 2hz6_A Endoplasmic reticulum t 99.4 2.8E-15 9.6E-20 137.7 -4.0 255 153-439 8-278 (369)
224 2ghs_A AGR_C_1268P; regucalcin 99.4 3.7E-10 1.3E-14 101.8 29.4 218 144-384 50-291 (326)
225 1kb0_A Quinohemoprotein alcoho 99.4 1.5E-11 5.3E-16 121.7 21.2 280 154-442 77-509 (677)
226 1yiq_A Quinohemoprotein alcoho 99.4 9E-11 3.1E-15 116.4 26.3 265 154-433 121-543 (689)
227 1yiq_A Quinohemoprotein alcoho 99.4 6.5E-11 2.2E-15 117.4 25.3 281 154-442 70-507 (689)
228 2hz6_A Endoplasmic reticulum t 99.4 4.1E-13 1.4E-17 123.3 6.0 202 201-422 8-217 (369)
229 1kb0_A Quinohemoprotein alcoho 99.4 2.5E-10 8.7E-15 113.0 26.3 259 153-425 127-536 (677)
230 3hxj_A Pyrrolo-quinoline quino 99.4 6.4E-11 2.2E-15 107.1 20.5 264 142-439 59-323 (330)
231 3q7m_A Lipoprotein YFGL, BAMB; 99.4 7.9E-10 2.7E-14 101.9 27.7 256 153-437 102-375 (376)
232 1mda_H Methylamine dehydrogena 99.4 7.1E-11 2.4E-15 107.0 19.9 248 147-418 69-366 (368)
233 2ece_A 462AA long hypothetical 99.4 5.1E-10 1.8E-14 101.9 25.2 227 200-427 93-399 (462)
234 1fwx_A Nitrous oxide reductase 99.3 6.7E-10 2.3E-14 104.8 25.5 222 201-433 100-413 (595)
235 3hxj_A Pyrrolo-quinoline quino 99.3 5.5E-11 1.9E-15 107.5 15.5 258 147-438 24-282 (330)
236 2qe8_A Uncharacterized protein 99.2 9.1E-10 3.1E-14 100.0 19.8 230 141-392 65-318 (343)
237 4a2l_A BT_4663, two-component 99.2 1.7E-07 5.9E-12 95.2 38.1 282 142-438 309-612 (795)
238 2iwa_A Glutamine cyclotransfer 99.2 1.5E-08 5.1E-13 86.8 25.3 200 233-440 22-237 (266)
239 4a2l_A BT_4663, two-component 99.2 2.2E-07 7.5E-12 94.4 37.7 281 145-439 175-479 (795)
240 1npe_A Nidogen, entactin; glyc 99.2 5.5E-08 1.9E-12 84.8 28.4 219 144-377 37-263 (267)
241 1npe_A Nidogen, entactin; glyc 99.2 9.4E-08 3.2E-12 83.3 29.8 253 155-421 2-263 (267)
242 1kv9_A Type II quinohemoprotei 99.1 7.6E-09 2.6E-13 102.3 23.0 263 154-433 117-526 (668)
243 2ece_A 462AA long hypothetical 99.1 5E-08 1.7E-12 89.0 25.2 231 152-383 93-399 (462)
244 2iwa_A Glutamine cyclotransfer 99.1 4.8E-08 1.6E-12 83.6 23.8 201 192-396 22-238 (266)
245 1flg_A Protein (quinoprotein e 99.1 7.1E-08 2.4E-12 93.5 27.5 284 154-452 117-580 (582)
246 2p4o_A Hypothetical protein; p 99.1 6.4E-07 2.2E-11 79.7 31.9 224 191-429 32-278 (306)
247 1kv9_A Type II quinohemoprotei 99.1 1.7E-08 5.9E-13 99.8 23.5 280 154-442 66-490 (668)
248 2fp8_A Strictosidine synthase; 99.1 2E-07 6.9E-12 83.7 26.9 243 143-395 19-313 (322)
249 3nol_A Glutamine cyclotransfer 99.1 1.5E-07 5.3E-12 79.5 24.0 184 234-426 45-242 (262)
250 3v9f_A Two-component system se 99.0 2.2E-06 7.5E-11 86.9 36.7 285 142-439 257-567 (781)
251 2ad6_A Methanol dehydrogenase 99.0 4.1E-07 1.4E-11 88.1 29.8 280 154-442 62-496 (571)
252 1fwx_A Nitrous oxide reductase 99.0 1.2E-07 4.1E-12 89.6 24.9 188 242-440 100-361 (595)
253 1k3i_A Galactose oxidase precu 99.0 3.9E-08 1.3E-12 97.4 23.0 272 147-430 190-532 (656)
254 1w6s_A Methanol dehydrogenase 99.0 3.1E-07 1E-11 89.0 28.3 283 154-442 62-505 (599)
255 3nok_A Glutaminyl cyclase; bet 99.0 1.2E-07 4.2E-12 80.0 21.6 182 234-426 57-252 (268)
256 2xbg_A YCF48-like protein; pho 99.0 3.2E-06 1.1E-10 75.9 32.4 279 141-438 34-320 (327)
257 1w6s_A Methanol dehydrogenase 99.0 1.8E-07 6.2E-12 90.5 25.7 268 148-431 111-539 (599)
258 3v9f_A Two-component system se 99.0 1.6E-06 5.6E-11 87.8 34.0 282 141-438 311-609 (781)
259 2ad6_A Methanol dehydrogenase 99.0 1.6E-07 5.5E-12 90.9 25.2 257 154-426 115-524 (571)
260 3mbr_X Glutamine cyclotransfer 99.0 5.4E-07 1.8E-11 75.5 24.7 186 232-426 21-221 (243)
261 3nol_A Glutamine cyclotransfer 99.0 1.9E-07 6.4E-12 78.9 21.9 188 192-384 44-244 (262)
262 2fp8_A Strictosidine synthase; 99.0 4.1E-07 1.4E-11 81.7 25.9 235 192-440 20-313 (322)
263 3mbr_X Glutamine cyclotransfer 99.0 6.5E-07 2.2E-11 75.0 24.7 189 190-383 20-222 (243)
264 1flg_A Protein (quinoprotein e 98.9 1.6E-06 5.4E-11 84.1 28.7 282 154-442 68-518 (582)
265 3nok_A Glutaminyl cyclase; bet 98.9 5.9E-07 2E-11 75.9 20.9 186 192-383 56-254 (268)
266 2p4o_A Hypothetical protein; p 98.8 8.4E-06 2.9E-10 72.4 27.7 226 143-386 32-279 (306)
267 3tc9_A Hypothetical hydrolase; 98.8 4.2E-06 1.4E-10 78.0 26.2 242 144-394 138-429 (430)
268 3v64_C Agrin; beta propeller, 98.8 6.3E-05 2.2E-09 68.0 32.2 244 141-403 32-283 (349)
269 3v65_B Low-density lipoprotein 98.7 5.7E-05 2E-09 69.3 31.1 241 144-403 78-326 (386)
270 2xe4_A Oligopeptidase B; hydro 98.7 2.4E-06 8.1E-11 85.9 23.3 191 144-342 175-398 (751)
271 3tc9_A Hypothetical hydrolase; 98.7 1E-05 3.4E-10 75.5 26.0 245 191-438 137-428 (430)
272 3v64_C Agrin; beta propeller, 98.7 0.00012 4E-09 66.3 31.1 233 194-441 37-276 (349)
273 3qqz_A Putative uncharacterize 98.7 4.1E-05 1.4E-09 65.1 25.6 200 134-341 20-250 (255)
274 2xzh_A Clathrin heavy chain 1; 98.6 0.00018 6.2E-09 62.3 29.6 257 164-436 49-328 (365)
275 4hw6_A Hypothetical protein, I 98.6 3.6E-05 1.2E-09 71.7 27.1 244 191-438 139-431 (433)
276 1k3i_A Galactose oxidase precu 98.6 2.2E-06 7.6E-11 84.8 19.8 233 195-427 190-474 (656)
277 4hw6_A Hypothetical protein, I 98.6 2.2E-05 7.4E-10 73.2 25.3 242 143-394 139-432 (433)
278 2xe4_A Oligopeptidase B; hydro 98.6 4.7E-06 1.6E-10 83.7 22.2 193 192-393 175-398 (751)
279 1ijq_A LDL receptor, low-densi 98.6 0.00027 9.1E-09 62.9 31.7 227 204-442 3-240 (316)
280 1ijq_A LDL receptor, low-densi 98.6 0.00032 1.1E-08 62.4 33.5 232 156-403 3-246 (316)
281 3kya_A Putative phosphatase; s 98.6 0.00013 4.6E-09 68.1 29.0 251 144-400 140-480 (496)
282 3s94_A LRP-6, low-density lipo 98.6 0.00069 2.4E-08 66.1 35.7 160 142-307 39-205 (619)
283 3p5b_L Low density lipoprotein 98.6 0.00044 1.5E-08 63.7 33.6 233 155-403 84-328 (400)
284 3v65_B Low-density lipoprotein 98.6 0.0001 3.6E-09 67.6 28.0 233 194-441 80-319 (386)
285 3qqz_A Putative uncharacterize 98.6 0.0001 3.4E-09 62.7 25.2 203 189-393 25-251 (255)
286 3p5b_L Low density lipoprotein 98.5 0.0003 1E-08 64.8 30.2 228 204-443 85-323 (400)
287 1bpo_A Protein (clathrin); cla 98.5 0.00053 1.8E-08 61.8 30.5 258 164-437 48-328 (494)
288 2ism_A Putative oxidoreductase 98.5 0.00015 5E-09 65.7 26.1 235 192-431 32-337 (352)
289 3sov_A LRP-6, low-density lipo 98.5 0.00013 4.5E-09 64.8 24.8 203 145-352 37-246 (318)
290 3sov_A LRP-6, low-density lipo 98.5 0.00034 1.1E-08 62.2 27.4 232 156-403 6-246 (318)
291 2xbg_A YCF48-like protein; pho 98.5 0.00065 2.2E-08 60.7 29.6 231 142-392 79-319 (327)
292 3amr_A 3-phytase; beta-propell 98.4 0.00017 5.7E-09 63.8 24.1 185 242-439 39-262 (355)
293 3m0c_C LDL receptor, low-densi 98.4 0.0013 4.4E-08 65.8 32.2 231 156-402 397-639 (791)
294 3kya_A Putative phosphatase; s 98.4 0.00065 2.2E-08 63.5 27.8 248 191-441 139-476 (496)
295 2p9w_A MAL S 1 allergenic prot 98.3 0.00017 5.9E-09 63.1 21.8 165 141-307 11-218 (334)
296 3amr_A 3-phytase; beta-propell 98.3 0.0011 3.9E-08 58.5 26.2 193 153-355 39-275 (355)
297 2ism_A Putative oxidoreductase 98.3 0.00062 2.1E-08 61.5 25.5 224 142-383 30-333 (352)
298 3a9g_A Putative uncharacterize 98.3 0.0021 7.2E-08 58.0 29.2 231 192-426 30-329 (354)
299 3ei3_A DNA damage-binding prot 98.3 0.0045 1.6E-07 64.7 33.9 280 141-441 552-914 (1158)
300 3m0c_C LDL receptor, low-densi 98.2 0.0023 7.9E-08 64.0 30.4 227 204-442 397-634 (791)
301 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0061 2.1E-07 59.5 36.4 200 143-349 37-242 (628)
302 1n7d_A LDL receptor, low-densi 98.2 3.3E-05 1.1E-09 76.6 15.6 226 163-403 385-622 (699)
303 2xzh_A Clathrin heavy chain 1; 98.1 0.0031 1.1E-07 54.7 27.6 236 147-402 71-339 (365)
304 2g8s_A Glucose/sorbosone dehyd 98.1 0.0022 7.6E-08 57.9 25.8 144 144-289 19-213 (353)
305 2g8s_A Glucose/sorbosone dehyd 98.1 0.0021 7.3E-08 58.0 25.4 242 192-433 19-347 (353)
306 2vpj_A Kelch-like protein 12; 98.1 0.0011 3.8E-08 58.3 23.3 226 153-396 14-279 (301)
307 2p9w_A MAL S 1 allergenic prot 98.1 0.0029 9.8E-08 55.4 24.7 166 227-396 8-216 (334)
308 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0081 2.8E-07 58.6 33.5 229 155-400 7-242 (628)
309 1n7d_A LDL receptor, low-densi 98.1 2.5E-05 8.6E-10 77.4 12.6 203 143-352 406-622 (699)
310 1bpo_A Protein (clathrin); cla 98.1 0.0058 2E-07 55.2 27.3 235 147-401 70-337 (494)
311 3s94_A LRP-6, low-density lipo 98.0 0.0056 1.9E-07 59.7 27.8 223 163-400 17-248 (619)
312 2xn4_A Kelch-like protein 2; s 98.0 0.0026 8.8E-08 56.0 23.1 226 154-397 16-278 (302)
313 3ii7_A Kelch-like protein 7; p 98.0 0.0036 1.2E-07 55.2 23.6 224 155-396 13-273 (306)
314 2vpj_A Kelch-like protein 12; 98.0 0.003 1E-07 55.5 23.0 214 201-430 14-263 (301)
315 3a9g_A Putative uncharacterize 98.0 0.0095 3.2E-07 53.7 29.4 226 142-383 28-330 (354)
316 3ei3_A DNA damage-binding prot 97.9 0.038 1.3E-06 57.9 38.2 275 143-439 514-872 (1158)
317 3ii7_A Kelch-like protein 7; p 97.8 0.012 4.1E-07 51.8 24.5 214 202-430 12-257 (306)
318 1xi4_A Clathrin heavy chain; a 97.8 0.0017 5.8E-08 67.4 20.6 227 164-403 48-297 (1630)
319 2xn4_A Kelch-like protein 2; s 97.8 0.0067 2.3E-07 53.3 21.9 214 202-431 16-262 (302)
320 1zgk_A Kelch-like ECH-associat 97.8 0.0079 2.7E-07 53.1 22.0 226 152-396 23-288 (308)
321 4asc_A Kelch repeat and BTB do 97.6 0.024 8.3E-07 50.0 23.0 182 156-346 7-223 (315)
322 3ott_A Two-component system se 97.6 0.071 2.4E-06 53.6 36.9 282 142-438 145-446 (758)
323 3das_A Putative oxidoreductase 97.6 0.035 1.2E-06 49.4 30.7 255 141-431 30-330 (347)
324 1zgk_A Kelch-like ECH-associat 97.6 0.016 5.3E-07 51.1 21.1 214 201-430 24-272 (308)
325 2uvk_A YJHT; unknown function, 97.5 0.018 6.1E-07 51.9 21.3 235 153-404 19-351 (357)
326 4asc_A Kelch repeat and BTB do 97.5 0.039 1.3E-06 48.7 22.3 210 204-429 7-252 (315)
327 3sre_A PON1, serum paraoxonase 97.5 0.032 1.1E-06 49.9 21.5 155 276-440 52-252 (355)
328 2woz_A Kelch repeat and BTB do 97.4 0.056 1.9E-06 47.8 23.3 223 156-397 18-289 (318)
329 3ott_A Two-component system se 97.4 0.16 5.3E-06 51.1 38.5 264 142-426 62-341 (758)
330 3sre_A PON1, serum paraoxonase 97.3 0.084 2.9E-06 47.2 24.9 194 233-438 51-296 (355)
331 3pbp_A Nucleoporin NUP82; beta 97.3 0.021 7.3E-07 51.6 17.5 145 151-300 29-208 (452)
332 1cru_A Protein (soluble quinop 97.3 0.12 4.1E-06 48.1 29.5 110 142-251 26-163 (454)
333 1xi4_A Clathrin heavy chain; a 97.3 0.015 5E-07 60.8 18.1 235 147-401 70-337 (1630)
334 3s25_A Hypothetical 7-bladed b 97.2 0.11 3.8E-06 45.4 21.5 196 199-426 22-240 (302)
335 2be1_A Serine/threonine-protei 97.1 0.016 5.3E-07 51.4 15.3 142 203-345 11-184 (339)
336 2be1_A Serine/threonine-protei 97.1 0.004 1.4E-07 55.2 11.1 189 155-349 11-236 (339)
337 1tl2_A L10, protein (tachylect 97.1 0.012 4.2E-07 48.0 12.8 178 243-433 4-203 (236)
338 2woz_A Kelch repeat and BTB do 97.1 0.13 4.5E-06 45.3 21.3 212 203-430 17-263 (318)
339 3qhy_B Beta-lactamase inhibito 97.0 0.14 4.7E-06 44.3 20.1 222 144-397 25-248 (282)
340 3pbp_A Nucleoporin NUP82; beta 97.0 0.045 1.6E-06 49.5 16.9 150 240-391 29-208 (452)
341 2uvk_A YJHT; unknown function, 97.0 0.097 3.3E-06 47.0 19.4 140 201-342 19-224 (357)
342 1tl2_A L10, protein (tachylect 96.9 0.013 4.6E-07 47.7 11.7 146 144-297 42-203 (236)
343 3s25_A Hypothetical 7-bladed b 96.8 0.22 7.7E-06 43.4 28.4 242 151-435 22-288 (302)
344 2zwa_A Leucine carboxyl methyl 96.8 0.2 6.8E-06 49.6 21.5 220 200-427 396-673 (695)
345 2zwa_A Leucine carboxyl methyl 96.8 0.21 7.2E-06 49.4 21.6 195 152-346 396-637 (695)
346 3qhy_B Beta-lactamase inhibito 96.7 0.28 9.5E-06 42.4 20.1 218 192-438 25-244 (282)
347 3sbq_A Nitrous-oxide reductase 96.6 0.53 1.8E-05 44.2 25.2 261 156-426 72-452 (638)
348 3das_A Putative oxidoreductase 95.2 1.5 5.3E-05 38.9 18.3 102 191-292 32-158 (347)
349 1cru_A Protein (soluble quinop 94.8 2.5 8.6E-05 39.2 28.4 102 192-293 28-163 (454)
350 1suu_A DNA gyrase subunit A; t 94.5 2.2 7.7E-05 37.2 26.9 191 152-344 6-231 (312)
351 3b7f_A Glycosyl hydrolase, BNR 94.3 2.9 0.0001 37.9 26.4 140 154-300 22-204 (394)
352 2wg3_C Hedgehog-interacting pr 94.3 3.4 0.00012 38.4 30.1 108 145-252 16-159 (463)
353 3b7f_A Glycosyl hydrolase, BNR 94.0 3.4 0.00012 37.4 27.5 157 142-301 54-259 (394)
354 2wg3_C Hedgehog-interacting pr 93.9 4 0.00014 37.9 28.5 103 192-294 15-159 (463)
355 3sbq_A Nitrous-oxide reductase 93.9 4.4 0.00015 38.2 23.2 73 367-440 325-408 (638)
356 1zi0_A DNA gyrase subunit A; b 92.5 4.9 0.00017 35.0 26.5 241 152-395 1-277 (307)
357 3uc1_A DNA gyrase subunit A; D 91.8 6.3 0.00022 34.6 23.0 229 154-395 3-279 (327)
358 1wp5_A Topoisomerase IV; broke 90.2 9 0.00031 33.5 24.2 187 152-343 3-224 (323)
359 3l6v_A GYRA, DNA gyrase subuni 90.0 10 0.00035 33.9 26.3 151 151-303 4-179 (370)
360 1suu_A DNA gyrase subunit A; t 89.6 9.8 0.00033 33.1 24.3 193 200-395 6-231 (312)
361 4gq2_M Nucleoporin NUP120; bet 89.5 5.8 0.0002 40.8 14.2 39 364-402 235-273 (950)
362 3no0_A DNA gyrase subunit A; D 88.3 11 0.00038 32.1 20.9 119 141-261 66-195 (276)
363 3no0_A DNA gyrase subunit A; D 87.9 12 0.00041 31.9 22.5 197 231-435 23-239 (276)
364 1wp5_A Topoisomerase IV; broke 87.6 14 0.00047 32.3 26.1 193 200-395 3-225 (323)
365 3uc1_A DNA gyrase subunit A; D 86.5 16 0.00055 32.0 24.2 194 143-343 42-278 (327)
366 4hvt_A Ritya.17583.B, post-pro 86.1 28 0.00095 34.4 25.3 236 145-394 131-429 (711)
367 3zwu_A Alkaline phosphatase PH 84.4 3.5 0.00012 39.5 8.6 60 367-427 478-549 (592)
368 4hvt_A Ritya.17583.B, post-pro 83.3 37 0.0013 33.5 21.6 222 194-426 132-413 (711)
369 3l6v_A GYRA, DNA gyrase subuni 81.1 30 0.001 30.9 26.7 144 199-343 4-179 (370)
370 4a9v_A PHOX; hydrolase, beta-p 80.9 7.7 0.00026 36.8 9.2 62 366-428 477-550 (592)
371 3q6k_A 43.2 kDa salivary prote 79.6 34 0.0012 30.6 19.5 162 141-304 85-306 (381)
372 1zi0_A DNA gyrase subunit A; b 77.7 34 0.0012 29.6 26.6 190 201-394 2-225 (307)
373 3kci_A Probable E3 ubiquitin-p 76.1 43 0.0015 30.0 28.0 241 145-396 55-346 (389)
374 4fhn_B Nucleoporin NUP120; pro 75.9 8.2 0.00028 40.7 8.8 36 367-402 240-275 (1139)
375 4fhn_B Nucleoporin NUP120; pro 74.8 88 0.003 32.9 16.8 38 318-355 242-279 (1139)
376 1zvt_A Topoisomerase IV subuni 69.1 50 0.0017 27.6 13.9 147 287-438 4-161 (256)
377 3f7f_A Nucleoporin NUP120; nuc 67.2 24 0.00083 34.5 9.1 36 317-353 224-259 (729)
378 4gq2_M Nucleoporin NUP120; bet 63.8 1.4E+02 0.0047 30.7 28.0 37 319-355 241-277 (950)
379 3kci_A Probable E3 ubiquitin-p 61.3 91 0.0031 27.9 24.1 196 144-344 106-345 (389)
380 4a9v_A PHOX; hydrolase, beta-p 58.6 55 0.0019 31.1 9.5 61 232-292 476-549 (592)
381 3zwu_A Alkaline phosphatase PH 54.6 48 0.0017 31.7 8.7 58 234-291 478-548 (592)
382 1sqj_A OXG-RCBH, oligoxylogluc 53.3 1.9E+02 0.0063 29.0 16.8 158 142-299 14-196 (789)
383 3f7f_A Nucleoporin NUP120; nuc 51.6 1.9E+02 0.0064 28.5 14.9 37 366-404 223-259 (729)
384 1q47_A Semaphorin 3A; beta pro 51.0 66 0.0023 30.0 8.8 65 366-431 405-483 (495)
385 3al9_A Plexin-A2; beta-propell 49.2 41 0.0014 31.8 7.2 60 367-426 402-468 (539)
386 3mez_B Mannose-specific lectin 46.8 73 0.0025 22.4 10.5 24 194-219 59-82 (113)
387 1zvt_A Topoisomerase IV subuni 44.0 1.4E+02 0.0048 24.8 15.3 142 155-304 3-163 (256)
388 3s9j_A Member of DUF4221 famil 42.4 1.7E+02 0.0057 26.0 9.7 87 141-228 27-117 (369)
389 4gz8_A Semaphorin-3A; multi-do 40.7 79 0.0027 30.8 7.8 65 367-432 414-492 (667)
390 2zux_A YESW protein; beta-prop 34.5 3.1E+02 0.011 26.1 18.1 217 165-396 293-533 (591)
391 1zvu_A Topoisomerase IV subuni 33.2 2.4E+02 0.0083 27.6 9.6 120 143-262 503-633 (716)
392 3nvq_A Semaphorin-7A; beta-pro 30.5 1.6E+02 0.0053 28.2 7.8 66 367-433 364-442 (590)
393 3a0c_A Mannose/sialic acid-bin 29.3 1.5E+02 0.005 20.7 11.3 76 194-289 22-97 (110)
394 3mvd_K Regulator of chromosome 28.7 3.2E+02 0.011 24.5 31.7 221 196-436 78-370 (423)
395 3ol2_B Plexin-B1; beta-propell 28.0 2E+02 0.0069 27.0 8.1 67 367-435 389-461 (528)
396 3q6k_A 43.2 kDa salivary prote 26.6 3.4E+02 0.012 24.1 21.9 173 254-426 124-341 (381)
397 2lsj_B DNA polymerase kappa; R 32.1 14 0.00048 17.9 0.0 11 2-12 8-18 (26)
398 3hx6_A Type 4 fimbrial biogene 26.0 4.3E+02 0.015 25.1 11.0 60 334-397 222-286 (570)
399 3al9_A Plexin-A2; beta-propell 25.6 1.2E+02 0.004 28.7 6.2 70 143-216 400-476 (539)
400 3mez_A Mannose-specific lectin 25.3 1.8E+02 0.006 20.3 8.4 13 236-248 53-65 (111)
401 1q47_A Semaphorin 3A; beta pro 24.5 2.4E+02 0.0081 26.3 7.9 69 144-216 405-487 (495)
402 1olz_A Semaphorin 4D; developm 24.0 2.2E+02 0.0075 27.7 7.8 64 367-431 399-473 (663)
403 1b2p_A Protein (lectin); manno 23.3 2E+02 0.0069 20.3 11.9 44 236-289 64-107 (119)
404 3mez_B Mannose-specific lectin 22.6 2E+02 0.0069 20.1 10.4 47 277-341 59-105 (113)
405 3a0c_A Mannose/sialic acid-bin 21.7 2.1E+02 0.0071 19.9 11.2 76 146-247 22-97 (110)
406 3mez_A Mannose-specific lectin 20.7 2.2E+02 0.0075 19.8 8.2 23 195-218 53-75 (111)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-49 Score=374.23 Aligned_cols=287 Identities=21% Similarity=0.378 Sum_probs=264.9
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |.++|++++|+|++++|++|+.||.|++||+.++.....+. +|...|.+++|+|++++|++|+.|
T Consensus 100 ~~~~l~g--h~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~------~h~~~V~~v~~~~~~~~l~sgs~D 171 (410)
T 1vyh_C 100 EKYALSG--HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLK------GHTDSVQDISFDHSGKLLASCSAD 171 (410)
T ss_dssp CSCEEEC--CSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred ceEeecc--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------ccCCcEEEEEEcCCCCEEEEEeCC
Confidence 3456778 99999999999999999999999999999999988766665 688999999999999999999999
Q ss_pred CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902 212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS 290 (454)
Q Consensus 212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 290 (454)
|.|++||+ ....+..+.+|...|.+++|+|++++|++|+.|++|++||+.++.++..+.+|...|.++.++|++.+|++
T Consensus 172 ~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s 251 (410)
T 1vyh_C 172 MTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 251 (410)
T ss_dssp SCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred CeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEE
Confidence 99999999 66778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC---------------------CCEEEEEeCCCCEEEEecCCCccc
Q psy17902 291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN---------------------DQQFITCGEDGTLSLWSILKKVPT 348 (454)
Q Consensus 291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~---------------------~~~l~~~~~dg~i~iwd~~~~~~~ 348 (454)
|+.|+.|++||+.++... .+.+|...+.++.+.+ +.+|++|+.|+.|++||+.++.++
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred EcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 999999999999988776 7788999999888865 568999999999999999999888
Q ss_pred eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902 349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG 428 (454)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~ 428 (454)
..+.. |..+|++++|+|++++|++|+.||+|++||+.+++.+..+.. |...|++++|+|++.+|+++ +
T Consensus 332 ~~~~~---------h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~l~sg-s 399 (410)
T 1vyh_C 332 MTLVG---------HDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA--HEHFVTSLDFHKTAPYVVTG-S 399 (410)
T ss_dssp EEEEC---------CSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC--CSSCEEEEEECSSSSCEEEE-E
T ss_pred EEEEC---------CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC--CCCcEEEEEEcCCCCEEEEE-e
Confidence 87753 456699999999999999999999999999999988888876 88899999999999999998 8
Q ss_pred CCCceeeeee
Q psy17902 429 TEHRFGRWKT 438 (454)
Q Consensus 429 ~d~~i~~W~~ 438 (454)
.|+.|++|+.
T Consensus 400 ~D~~i~vW~~ 409 (410)
T 1vyh_C 400 VDQTVKVWEC 409 (410)
T ss_dssp TTSEEEEEC-
T ss_pred CCCcEEEEeC
Confidence 9999999985
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6.4e-48 Score=353.39 Aligned_cols=287 Identities=23% Similarity=0.329 Sum_probs=258.5
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....|.+ |.+.|++++|+|++++|++|+.||.|++||+.++.....+. .|...|.+++|+|++++|++|+.|
T Consensus 47 ~~~~l~g--H~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 47 TRRTLRG--HLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIP------LRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp EEEEECC--CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE------CSSSCEEEEEECTTSSEEEEEETT
T ss_pred hheeecC--CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEee------cCCccEEEEEECCCCCEEEEEeCC
Confidence 5678899 99999999999999999999999999999999888776665 478899999999999999999999
Q ss_pred CcEEEEeCCC-----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902 212 SNIKLWSSSL-----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 212 g~v~vw~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 286 (454)
+.|++|++.. .....+.+|.+.|.++.|++++ .+++++.|++|++||+.++..+..+.+|...|.+++|+|++.
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC
Confidence 9999999832 3456678999999999999876 589999999999999999999999999999999999999999
Q ss_pred EEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902 287 VISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP 364 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 364 (454)
+|++|+.|+.|++||++++... .+.+|...+.++.+. ++.+|++++.||.|++||++++..+..+.... +.
T Consensus 198 ~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~-------~~ 270 (340)
T 1got_B 198 LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN-------II 270 (340)
T ss_dssp EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT-------CC
T ss_pred EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC-------cc
Confidence 9999999999999999998776 788899999887775 57789999999999999999887776654211 23
Q ss_pred CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902 365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~ 437 (454)
..|++++|+|+|++|++|+.||.|++||+.++..+..+.. |.++|++++|+|+|.+|+++ +.|+.|++|+
T Consensus 271 ~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~--h~~~v~~~~~s~dg~~l~s~-s~D~~i~iWd 340 (340)
T 1got_B 271 CGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG--HDNRVSCLGVTDDGMAVATG-SWDSFLKIWN 340 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSCEEEEC
T ss_pred cceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeec--CCCcEEEEEEcCCCCEEEEE-cCCccEEecC
Confidence 4599999999999999999999999999999988888876 88999999999999999999 8999999996
No 3
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.9e-47 Score=349.81 Aligned_cols=289 Identities=18% Similarity=0.332 Sum_probs=257.9
Q ss_pred eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
...+.|.+ |.+.|++++|+|++++|++|+.||+|++||..++.....+. .+...|.+++|+|++.+|++|+.
T Consensus 55 ~~~~~l~g--H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~------~~~~~v~~~~~sp~g~~lasg~~ 126 (354)
T 2pbi_B 55 KTRRTLKG--HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVT------MPCTWVMACAYAPSGCAIACGGL 126 (354)
T ss_dssp CEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE------CSSSCCCEEEECTTSSEEEEEST
T ss_pred EEEEEecC--CCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEe------cCCCCEEEEEECCCCCEEEEeeC
Confidence 35678899 99999999999999999999999999999998887766655 36778999999999999999999
Q ss_pred CCcEEEEeCCC-------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902 211 NSNIKLWSSSL-------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283 (454)
Q Consensus 211 dg~v~vw~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 283 (454)
|+.+++|++.. .....+..|...|.+++|+|++..|++++.|++|++||+.+++.+..+.+|...|.+++|+|
T Consensus 127 d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 127 DNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp TSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred CCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 99999999832 34566778999999999999999999999999999999999999999999999999999987
Q ss_pred --CCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902 284 --KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS 359 (454)
Q Consensus 284 --~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 359 (454)
++++|++|+.||.|++||++++..+ .+..|...+.++.+. ++..|++++.|++|++||++....+..+....
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~---- 282 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES---- 282 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT----
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCC----
Confidence 4689999999999999999998877 778899999888775 57799999999999999999887665554221
Q ss_pred CCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902 360 SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 360 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~ 437 (454)
+...+.+++|+|++.+|++|+.|++|++||+.++..+..+.. |.+.|++++|+|+|++|+++ +.|+.|++|+
T Consensus 283 ---~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~--h~~~v~~l~~spdg~~l~sg-s~D~~v~vW~ 354 (354)
T 2pbi_B 283 ---IIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFG--HENRVSTLRVSPDGTAFCSG-SWDHTLRVWA 354 (354)
T ss_dssp ---CCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECC--CSSCEEEEEECTTSSCEEEE-ETTSEEEEEC
T ss_pred ---cccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEEC--CCCcEEEEEECCCCCEEEEE-cCCCCEEecC
Confidence 233489999999999999999999999999999988888876 88999999999999999999 8999999995
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-47 Score=345.76 Aligned_cols=289 Identities=16% Similarity=0.276 Sum_probs=257.0
Q ss_pred eEeEeccCCCCCCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902 132 VCTKFNGKPHRASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS 207 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 207 (454)
..+.+.+ |.+.|++++|+|+ +.+|++|+.||+|+||++......... ...+|...|.+++|++++.++++
T Consensus 24 ~~~~~~~--H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~----~l~gh~~~v~~~~~~~~~~~l~s 97 (321)
T 3ow8_A 24 LFKQEQA--HDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQW----SLEGHQLGVVSVDISHTLPIAAS 97 (321)
T ss_dssp EEEETTS--SSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEE----EECCCSSCEEEEEECSSSSEEEE
T ss_pred eeeeccc--CCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeee----eeccCCCCEEEEEECCCCCEEEE
Confidence 4456667 9999999999985 679999999999999999876533211 12378899999999999999999
Q ss_pred ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902 208 GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 208 ~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 286 (454)
++.|+.|++||+ ++..+..+..|...+.+++|+|++++|++|+.||.|++|++.++.....+..|...|.+++|+|+++
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 177 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK 177 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSS
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCC
Confidence 999999999999 7778888889999999999999999999999999999999999999988989999999999999999
Q ss_pred EEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902 287 VISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP 364 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 364 (454)
+|++|+.||.|++||+++++.+ .+.+|...+.++.+. ++.+|++++.|+.|++||+.++.....+.. |.
T Consensus 178 ~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~---------h~ 248 (321)
T 3ow8_A 178 YLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSG---------HA 248 (321)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECC---------CS
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcC---------CC
Confidence 9999999999999999998877 678888888877765 567899999999999999998887776643 45
Q ss_pred CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
..|.+++|+|++.+|++|+.||+|++||+.++.++..+.. |.+.|++++|+|++++|+++ +.|+.|++|+.
T Consensus 249 ~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~g~~l~s~-~~d~~i~vwd~ 319 (321)
T 3ow8_A 249 SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNGSKIVSV-GDDQEIHIYDC 319 (321)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTCCEEEEEC
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC--CCCcEEEEEECCCCCEEEEE-eCCCeEEEEeC
Confidence 6699999999999999999999999999999999888876 88999999999999999988 89999999985
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-47 Score=345.06 Aligned_cols=287 Identities=19% Similarity=0.308 Sum_probs=250.7
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
..++|.+ |.+.|++++|+|++++|++|+.||.|++||+.++.....+. .|..+|.+++|+|++++|++|+.|
T Consensus 5 ~~~~~~~--h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 5 IKKTFSN--RSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQ------VTETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CEEEEEE--ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred eEEeecC--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEee------ccCCcEEEEEEeCCCCEEEEECCC
Confidence 3567888 99999999999999999999999999999999988776665 578899999999999999999999
Q ss_pred CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeec-CCCEE
Q psy17902 212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILA-KNRVI 288 (454)
Q Consensus 212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l 288 (454)
+.|++||+ ++..+..+.+|...|.+++|+|++.+|++|+.||+|++||+.++ .....+.+|...|.+++|+| ++.+|
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred CEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 99999999 77888899999999999999999999999999999999999877 45567889999999999999 57899
Q ss_pred EEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEec---CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902 289 SSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRV---NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
++|+.|+.|++||++..... ...++...+..+.+. ++.+|++++.|+.|++||+.++.++..+.. |
T Consensus 157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~---------h 227 (304)
T 2ynn_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---------H 227 (304)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC---------C
T ss_pred EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC---------C
Confidence 99999999999999876544 344555677766654 456899999999999999999988888764 4
Q ss_pred CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC--EEEEEecCCCceeeeeee
Q psy17902 364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK--HLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~--~l~~~~~~d~~i~~W~~~ 439 (454)
...|.+++|+|++.+|++|+.||+|++||+.+++.+..+.. +...+.+++|+|++. +|+++ .+..+.+|+..
T Consensus 228 ~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~asg--~~~g~~~~~~~ 301 (304)
T 2ynn_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV--GLERSWCIATHPTGRKNYIASG--FDNGFTVLSLG 301 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECC--SSSSEEEEEECTTCGGGCEEEE--ETTEEEEEECC
T ss_pred CCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccC--CCccEEEEEECCCCCceEEEEe--cCCceEEEEec
Confidence 45599999999999999999999999999999999988876 778899999999986 35544 45556677654
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.1e-47 Score=351.07 Aligned_cols=300 Identities=23% Similarity=0.356 Sum_probs=258.6
Q ss_pred eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
...+.|.| |.+.|++++|+|++++|++|+.||+|+|||+.++.....+. .|...|.+++|+|++++|++|+.
T Consensus 57 ~~~~~l~g--H~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~------~h~~~v~~~~~s~~g~~las~~~ 128 (380)
T 3iz6_a 57 VCCRTLQG--HSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIK------LHCPWVMECAFAPNGQSVACGGL 128 (380)
T ss_dssp EEEEEECC--CSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE------CCCTTCCCCEECTTSSEEEECCS
T ss_pred EEeecccc--cccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEe------cCCCCEEEEEECCCCCEEEEeeC
Confidence 46788999 99999999999999999999999999999999988776665 58889999999999999999999
Q ss_pred CCcEEEEeCCC--------ccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEe-----eccCCce
Q psy17902 211 NSNIKLWSSSL--------EHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETL-----FGHQSAI 276 (454)
Q Consensus 211 dg~v~vw~~~~--------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v 276 (454)
|+.|++|++.. .....+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.+++.+..+ .+|...|
T Consensus 129 d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 129 DSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp SSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCE
T ss_pred CCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCe
Confidence 99999999832 234567899999999999996 457999999999999999999988776 5799999
Q ss_pred eEEEeec-CCCEEEEeeCCCcEEEeeccCC-eEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902 277 TSLDILA-KNRVISSGGTDKSVRVWKIQEE-SQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIP 352 (454)
Q Consensus 277 ~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 352 (454)
.+++|++ ++++|++|+.|+.|++||++.. ..+ .+.+|...|.++.+. ++.+|++++.||+|++||++++..+..+.
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9999987 7899999999999999999843 333 788899999887765 56799999999999999999998887765
Q ss_pred cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc--CCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD--IPLSGVINSLVFTSDHKHLVAGIGTE 430 (454)
Q Consensus 353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~~~~~~d 430 (454)
...... ..+...|++++|+|+|++|++|+.||.|++||+..++.+..+.. ..|.+.|++++|+|+|.+|+++ +.|
T Consensus 289 ~~~~~~--~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~D 365 (380)
T 3iz6_a 289 REPDRN--DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG-SWD 365 (380)
T ss_dssp CCCSSS--CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE-CTT
T ss_pred cccccc--ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe-eCC
Confidence 433211 12334589999999999999999999999999998887776632 2488999999999999999998 899
Q ss_pred CceeeeeeeCC
Q psy17902 431 HRFGRWKTIKG 441 (454)
Q Consensus 431 ~~i~~W~~~~~ 441 (454)
+.|++|+....
T Consensus 366 ~~i~iW~~~~~ 376 (380)
T 3iz6_a 366 KNLKIWAFSGH 376 (380)
T ss_dssp SCEEEEECCSS
T ss_pred CCEEEEecCCC
Confidence 99999998654
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.5e-45 Score=329.62 Aligned_cols=295 Identities=18% Similarity=0.303 Sum_probs=256.3
Q ss_pred cCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902 128 NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS 207 (454)
Q Consensus 128 ~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 207 (454)
+.......+.+ |.+.|++++|+|++++|++|+.||.|++|++.++.....+. +|...|.+++|+|++++|++
T Consensus 11 ~~~~~~~~~~g--h~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s 82 (312)
T 4ery_A 11 PNYALKFTLAG--HTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTIS------GHKLGISDVAWSSDSNLLVS 82 (312)
T ss_dssp CCCEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEE
T ss_pred CCceeEEEEcc--cCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhc------cCCCceEEEEEcCCCCEEEE
Confidence 33446677888 99999999999999999999999999999999887766655 68889999999999999999
Q ss_pred ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902 208 GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 208 ~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 286 (454)
|+.||.|++||+ ++..+..+.+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|..+|.+++|+|+++
T Consensus 83 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (312)
T 4ery_A 83 ASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS 162 (312)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred ECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCC
Confidence 999999999999 7778889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeeCCCcEEEeeccCCeEEE--EccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902 287 VISSGGTDKSVRVWKIQEESQLV--FNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~~--~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
+|++++.||.|++||++++..+. ...+...+..+.+. ++.+|++++.||.|++||+.+++.+..+..+...
T Consensus 163 ~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~------ 236 (312)
T 4ery_A 163 LIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE------ 236 (312)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCS------
T ss_pred EEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCc------
Confidence 99999999999999999987762 23455567766655 5778999999999999999999887776543321
Q ss_pred CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe-cCCCceeeeee
Q psy17902 364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI-GTEHRFGRWKT 438 (454)
Q Consensus 364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~-~~d~~i~~W~~ 438 (454)
...+......+++.+|++|+.||.|++||+.++..+..+.. |...|.+++|+|++.+|++++ +.|+.|++|+.
T Consensus 237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQG--HTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECC--CSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhc--cCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 11133333446788999999999999999999999888886 888999999999999999884 37999999985
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.3e-46 Score=342.50 Aligned_cols=287 Identities=17% Similarity=0.220 Sum_probs=234.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902 141 HRASITCIAVTSDSKHVYSACK------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI 214 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v 214 (454)
|...|++++|||||++||+|+. ||.|++|+..++.....+... ...|...|.+++|+|++.+| +++.||.|
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~--~~~~~~~V~~~~~s~d~~~l-~~s~dg~v 117 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTA--GVQTEAGVTDVAWVSEKGIL-VASDSGAV 117 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSE--EEECSSCEEEEEEETTTEEE-EEETTSCE
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecc--cCCCCCCEEEEEEcCCCCEE-EEECCCEE
Confidence 9999999999999999999997 788999998776544433221 12477789999999998655 56779999
Q ss_pred EEEeC-CCccE----EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEE
Q psy17902 215 KLWSS-SLEHL----HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVI 288 (454)
Q Consensus 215 ~vw~~-~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 288 (454)
+|||+ +++.. ....+|...|++++|+|++++|++|+.||.|++||+.+++.+..+.+|...|++++|+|++ .++
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~ 197 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIF 197 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCcee
Confidence 99998 33332 2345799999999999999999999999999999999999999999999999999999987 478
Q ss_pred EEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902 289 SSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
++++.|+.|++||+++++.. ....+...+.++.+.+ +.+|++|+.|+.|++||+++++++..+.. |
T Consensus 198 ~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~---------~ 268 (357)
T 4g56_B 198 LSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAV---------H 268 (357)
T ss_dssp EEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECC---------C
T ss_pred eeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEec---------c
Confidence 99999999999999988766 3345566677777754 45788999999999999999988887754 3
Q ss_pred CCcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC-CCCEEEEEecCCCceeeeeeeCC
Q psy17902 364 PNWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS-DHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 364 ~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
...|++++|+|++ ++||+|+.||+|+|||+.+++.+..+. |.+.|++|+|+| ++.+|+++ |.|+.|++|++...
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~---H~~~V~~vafsP~d~~~l~s~-s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLS---HRDFVTGVAWSPLDHSKFTTV-GWDHKVLHHHLPSE 344 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECC---CSSCEEEEEECSSSTTEEEEE-ETTSCEEEEECC--
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECC---CCCCEEEEEEeCCCCCEEEEE-cCCCeEEEEECCCC
Confidence 4559999999987 589999999999999999988776653 889999999998 78899888 89999999998654
Q ss_pred Ce
Q psy17902 442 VK 443 (454)
Q Consensus 442 ~~ 443 (454)
.+
T Consensus 345 ~~ 346 (357)
T 4g56_B 345 GR 346 (357)
T ss_dssp --
T ss_pred Cc
Confidence 33
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.1e-46 Score=342.50 Aligned_cols=287 Identities=14% Similarity=0.159 Sum_probs=229.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce-----ecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK-----VCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIK 215 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~ 215 (454)
|...|.+++|+|||++|++++ |+++++||...... ............+...|.+++|+|++ .|++|+.||.|+
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~ 106 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVE 106 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEE
Confidence 778899999999999999887 67778886321100 00000000011245679999999986 678999999999
Q ss_pred EEeC-CCccEE----eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEE
Q psy17902 216 LWSS-SLEHLH----TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVIS 289 (454)
Q Consensus 216 vw~~-~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~ 289 (454)
|||+ +++.+. .+.+|...|++++|+|++++|++|+.|++|++||+.+++++..+.+|...|++++|+|++ .+|+
T Consensus 107 lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~ 186 (344)
T 4gqb_B 107 LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFL 186 (344)
T ss_dssp EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEE
T ss_pred EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCcee
Confidence 9999 444433 345899999999999999999999999999999999999999999999999999999988 5789
Q ss_pred EeeCCCcEEEeeccCCeEEE-E--ccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902 290 SGGTDKSVRVWKIQEESQLV-F--NGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP 364 (454)
Q Consensus 290 ~~~~dg~i~i~d~~~~~~~~-~--~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 364 (454)
+++.|++|++||+++++... + ..+...+.++.+.+ +.+|++|+.||.|++||+++++++..+.. |.
T Consensus 187 s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~---------h~ 257 (344)
T 4gqb_B 187 SCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV---------HS 257 (344)
T ss_dssp EEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC---------CS
T ss_pred eeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC---------CC
Confidence 99999999999999987763 2 33445566666653 45788999999999999999999888764 45
Q ss_pred CcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 365 NWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 365 ~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
..|++++|+|++ ++|++|+.||+|+|||+.+++.+. +.. |.+.|++++|+|+++.|++++|.|+.|++|++...
T Consensus 258 ~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~--H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 258 QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQA--HRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECC--CSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcC--CCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 559999999998 589999999999999999887654 333 88999999999999876665589999999998654
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=6.1e-45 Score=330.39 Aligned_cols=295 Identities=22% Similarity=0.411 Sum_probs=250.7
Q ss_pred eeEeEeccCCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD 209 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 209 (454)
....+|.| |.+.|++++|+|++ ++|++|+.||+|++|++......... ......+|...|.+++|+|++.+|++|+
T Consensus 8 ~l~~~l~g--H~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~-~~~~~~~h~~~v~~~~~s~dg~~l~s~s 84 (319)
T 3frx_A 8 VLRGTLEG--HNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGV-PVRSFKGHSHIVQDCTLTADGAYALSAS 84 (319)
T ss_dssp EEEEEECC--CSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEE-EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEcc--ccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccc-cceEEeCCcccEEEEEECCCCCEEEEEe
Confidence 35677889 99999999999965 89999999999999998653221100 0111236889999999999999999999
Q ss_pred CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC----
Q psy17902 210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK---- 284 (454)
Q Consensus 210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~---- 284 (454)
.|+.|++||+ ++..+..+.+|...|.+++|+|++.+|++|+.|++|++||+. +.++..+.+|...|.++.|+|.
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC----
T ss_pred CCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCC
Confidence 9999999999 777888999999999999999999999999999999999997 5567788899999999999985
Q ss_pred --CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902 285 --NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS 360 (454)
Q Consensus 285 --~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 360 (454)
+.+|++++.|+.|++||+++.... .+.+|...+.++.+. ++.+|++++.||.|++||+.+++.+..+..
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~------- 236 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA------- 236 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-------
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-------
Confidence 448999999999999999988776 778899999888776 567899999999999999999988887763
Q ss_pred CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC------CCceeeeEEEEcCCCCEEEEEecCCCcee
Q psy17902 361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI------PLSGVINSLVFTSDHKHLVAGIGTEHRFG 434 (454)
Q Consensus 361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------~~~~~v~~l~~s~d~~~l~~~~~~d~~i~ 434 (454)
...|.+++|+|++.+|++++.+ .+++|++..+..+..+... .+...+.+++|+|||++|+++ +.|+.|+
T Consensus 237 ---~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg-~~Dg~i~ 311 (319)
T 3frx_A 237 ---QDEVFSLAFSPNRYWLAAATAT-GIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG-YTDNVIR 311 (319)
T ss_dssp ---CSCEEEEEECSSSSEEEEEETT-EEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE-ETTSCEE
T ss_pred ---CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe-ecCceEE
Confidence 2339999999999999988865 4999999887666555421 245678999999999999998 8999999
Q ss_pred eeeeeCC
Q psy17902 435 RWKTIKG 441 (454)
Q Consensus 435 ~W~~~~~ 441 (454)
+|++.++
T Consensus 312 vWd~~t~ 318 (319)
T 3frx_A 312 VWQVMTA 318 (319)
T ss_dssp EEEEEEC
T ss_pred EEEEeec
Confidence 9998653
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.9e-45 Score=334.83 Aligned_cols=306 Identities=17% Similarity=0.264 Sum_probs=244.8
Q ss_pred eEeEeccCCCCC-CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 132 VCTKFNGKPHRA-SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 132 ~~~~~~~~~h~~-~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
....+.+ |.. .|.+++|+|++++||+|+.||.|+||++.++....... ...+|...|.+++|+|++++|++|+.
T Consensus 7 ~~~~~~~--h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~---~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 7 LLGRVPA--HPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSV---LSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEECC--STTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEE---ECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EeeeecC--CCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeee---eccccCCcEEEEEECCCCCEEEEEEC
Confidence 5677888 988 99999999999999999999999999998765332111 11268889999999999999999999
Q ss_pred CCcEEEEeCCC---ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---eeEEEeeccCCceeEEEeecC
Q psy17902 211 NSNIKLWSSSL---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR---AYVETLFGHQSAITSLDILAK 284 (454)
Q Consensus 211 dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~ 284 (454)
|+.|++|++.. ..+..+.+|...|.+++|+|++++|++|+.|++|++||+.++ .++..+.+|...|.+++|+|+
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 99999999843 356788999999999999999999999999999999999875 345677889999999999999
Q ss_pred CCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccC----
Q psy17902 285 NRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG---- 356 (454)
Q Consensus 285 ~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~---- 356 (454)
+.+|++++.|+.|++||+..+... .+.+|...|.++.+. ++.+|++++.|++|++|+.........+.....
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 999999999999999999887533 678899999888776 567899999999999999743221111000000
Q ss_pred ---CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce----eeEe---ccCCCceeeeEEEEcCCCC-EEEE
Q psy17902 357 ---YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT----LEFL---QDIPLSGVINSLVFTSDHK-HLVA 425 (454)
Q Consensus 357 ---~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~---~~~~~~~~v~~l~~s~d~~-~l~~ 425 (454)
......|...|.+++|+|++.+|++++.|+.|++|+...+.. ...+ ....|...|++++|+|++. +|++
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence 000012566699999999999999999999999999876521 1111 1124788999999999985 7777
Q ss_pred EecCCCceeeeeeeCCCe
Q psy17902 426 GIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 426 ~~~~d~~i~~W~~~~~~~ 443 (454)
+ +.|+.|++|+.....+
T Consensus 322 ~-s~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 322 C-SDDGEVAFWKYQRPEG 338 (345)
T ss_dssp E-ETTSCEEEEEECC---
T ss_pred c-CCCCcEEEEEecCCCC
Confidence 7 8999999999876543
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-44 Score=325.65 Aligned_cols=290 Identities=18% Similarity=0.288 Sum_probs=230.9
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGD 209 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 209 (454)
....|.+ |.+.|++++|+|+ +|++|+.||.|++|++..+. ....+. ...|...|.+++|+|++++|++|+
T Consensus 6 ~~~~~~~--h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~----~~~h~~~v~~v~~sp~~~~las~s 77 (330)
T 2hes_X 6 LIKSLKL--YKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLD----ETAHKKAIRSVAWRPHTSLLAAGS 77 (330)
T ss_dssp EEEEEEC--CSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEEC----TTCCCSCEEEEEECTTSSEEEEEE
T ss_pred cceeecc--CCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEe----cCCccCCEEEEEECCCCCEEEEEe
Confidence 4677888 9999999999997 99999999999999998753 222221 113888999999999999999999
Q ss_pred CCCcEEEEeCC--------CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC----ceeEEEeeccCCcee
Q psy17902 210 NNSNIKLWSSS--------LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED----RAYVETLFGHQSAIT 277 (454)
Q Consensus 210 ~dg~v~vw~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~ 277 (454)
.|+.|+||++. ...+..+.+|...|.+++|+|++++|++|+.|++|++||+.. .+++..+.+|...|.
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 99999999982 235667889999999999999999999999999999999943 256777889999999
Q ss_pred EEEeecCCCEEEEeeCCCcEEEeeccCC--eEE-EEccccCCeEEEEecCC---CEEEEEeCCCCEEEEecCCCcc----
Q psy17902 278 SLDILAKNRVISSGGTDKSVRVWKIQEE--SQL-VFNGHSRGIDMTRRVND---QQFITCGEDGTLSLWSILKKVP---- 347 (454)
Q Consensus 278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~--~~~-~~~~~~~~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~---- 347 (454)
+++|+|++.+|++++.|++|++||+..+ .++ .+.+|...+.++.+.+. ..|++++.|++|++||+..+..
T Consensus 158 ~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 158 HVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCE
T ss_pred EEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccc
Confidence 9999999999999999999999999876 333 77889999988888753 5799999999999999865421
Q ss_pred ----ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc--eeeEeccCCCce-eeeEEEEcC--
Q psy17902 348 ----THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR--TLEFLQDIPLSG-VINSLVFTS-- 418 (454)
Q Consensus 348 ----~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~~-~v~~l~~s~-- 418 (454)
...+. ..|...|.+++|++++ +|++++.||+|++|+..++. .+.... ..|.. .|++++|+|
T Consensus 238 ~~~~~~~~~--------~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~-~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 238 EWVCEAILP--------DVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRA-LCHGVYEINVVKWLELN 307 (330)
T ss_dssp EEEEEEECC--------SCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEES-CTTTTSCEEEEEEC---
T ss_pred eeEEeeecc--------cccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccc-cccccceEEEEEEecCC
Confidence 11111 1256669999999765 89999999999999998763 222221 23655 899999999
Q ss_pred CCCEEEEEecCCCceeeeeeeC
Q psy17902 419 DHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 419 d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
++++|+++ +.|+.|++|+...
T Consensus 308 ~~~~las~-s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 308 GKTILATG-GDDGIVNFWSLEK 328 (330)
T ss_dssp --CCEEEE-ETTSEEEEEEC--
T ss_pred CceEEEEe-cCCCcEEEEEecc
Confidence 68888888 8999999999754
No 13
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-43 Score=325.37 Aligned_cols=295 Identities=21% Similarity=0.288 Sum_probs=240.6
Q ss_pred eEeEeccCCCCCCeEEEEE-----cC-CCCEEEEEeCCCeEEEEEcCCCceeccc-CCcccCCCCCCceEEEEEeCCCcE
Q psy17902 132 VCTKFNGKPHRASITCIAV-----TS-DSKHVYSACKDGIIIKWLLETRSKVCSS-PFVKTDRKSYPPILALAVANNNEL 204 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~-----s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~ 204 (454)
....|.| |.+.|++++| ++ ++++|++|+.||+|++||+......... .......+|...|.+++|+|++.+
T Consensus 13 ~~~~l~g--H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~ 90 (343)
T 2xzm_R 13 KRGILEG--HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCF 90 (343)
T ss_dssp EEEEEEC--CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTE
T ss_pred eeeeecc--chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCE
Confidence 5677889 9999999999 76 8999999999999999999764321110 011122368899999999999999
Q ss_pred EEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee---ccCCceeEEE
Q psy17902 205 VASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF---GHQSAITSLD 280 (454)
Q Consensus 205 l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~ 280 (454)
|++|+.|+.|++||+ ++..+..+.+|...|.+++|+|++++|++++.|+.|++||+.... ..... +|...|.+++
T Consensus 91 l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 91 AISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp EEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeee
Confidence 999999999999999 677888999999999999999999999999999999999998433 33333 6889999999
Q ss_pred eecCC----------CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCC-Cccc
Q psy17902 281 ILAKN----------RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILK-KVPT 348 (454)
Q Consensus 281 ~~~~~----------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~-~~~~ 348 (454)
|+|++ .+|++++.|+.|++||........+.+|...+.++.+. ++.+|++++.||.|++||+.. ..+.
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~ 249 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQ 249 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCS
T ss_pred eccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccc
Confidence 99987 78999999999999996554444788899999888775 567899999999999999944 3344
Q ss_pred eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee--Eecc---------CCCceeeeEEEEc
Q psy17902 349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE--FLQD---------IPLSGVINSLVFT 417 (454)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~---------~~~~~~v~~l~~s 417 (454)
..+.. ...|.+++|+|++.+|+++ .|+.|++|++.++.... .+.. ..|...|++++|+
T Consensus 250 ~~~~~----------~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 318 (343)
T 2xzm_R 250 REFDA----------GSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWN 318 (343)
T ss_dssp EEEEC----------SSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEEC
T ss_pred eeecC----------CCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEEC
Confidence 43321 2239999999999888765 57789999998775443 3321 1366789999999
Q ss_pred CCCCEEEEEecCCCceeeeeeeCC
Q psy17902 418 SDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 418 ~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
|+|++|+++ +.|+.|++|+..++
T Consensus 319 p~g~~l~sg-~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 319 ALGKKLFAG-FTDGVIRTFSFETS 341 (343)
T ss_dssp SSSCCEEEE-ETTSEEEEEEEEEE
T ss_pred CCCCeEEEe-cCCceEEEEEEEcc
Confidence 999999998 89999999998654
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.9e-43 Score=326.40 Aligned_cols=296 Identities=19% Similarity=0.342 Sum_probs=241.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccC------------CCCCCceEEEEEeCCCcEEEEe
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTD------------RKSYPPILALAVANNNELVASG 208 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~~~v~~~~~~~~~~~l~~~ 208 (454)
|.+.|+|++|+|+|++||+|+ ++.+++|++.++.....+...... ..+...|.+++|+|++++|++|
T Consensus 63 h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 999999999999999999987 689999999988776554321100 0122359999999999999999
Q ss_pred cCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec-CCC
Q psy17902 209 DNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA-KNR 286 (454)
Q Consensus 209 ~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 286 (454)
+.|+.|++||+ ++..+..+.+|...|.+++|+|++.+|++++.|++|++||+.++++...+. +...+.+++|+| ++.
T Consensus 142 ~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~ 220 (393)
T 1erj_A 142 AEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGK 220 (393)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCC
T ss_pred cCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCC
Confidence 99999999999 667778899999999999999999999999999999999999998887765 667899999999 889
Q ss_pred EEEEeeCCCcEEEeeccCCeEE-EE-------ccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccC-
Q psy17902 287 VISSGGTDKSVRVWKIQEESQL-VF-------NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG- 356 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~-~~-------~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~- 356 (454)
+|++|+.|+.|++||++++..+ .+ .+|...+.++.+. ++.+|++++.|+.|++||+.+............
T Consensus 221 ~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~ 300 (393)
T 1erj_A 221 YIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 300 (393)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------
T ss_pred EEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCC
Confidence 9999999999999999988766 22 4678888887776 567899999999999999976533211110000
Q ss_pred --CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC------CCCEEEEEec
Q psy17902 357 --YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS------DHKHLVAGIG 428 (454)
Q Consensus 357 --~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~------d~~~l~~~~~ 428 (454)
......|...|.+++|+|++.+|++|+.||.|++||+.++..+..+.. |.+.|.+++|++ ++.+|+++ +
T Consensus 301 ~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~--h~~~v~~v~~~~~~~~~p~~~~l~sg-s 377 (393)
T 1erj_A 301 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG--HRNSVISVAVANGSSLGPEYNVFATG-S 377 (393)
T ss_dssp CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSCTTCTTCEEEEEE-E
T ss_pred cceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC--CCCCEEEEEecCCcCcCCCCCEEEEE-C
Confidence 000113566799999999999999999999999999999999888886 888999999986 67788888 8
Q ss_pred CCCceeeeeeeCC
Q psy17902 429 TEHRFGRWKTIKG 441 (454)
Q Consensus 429 ~d~~i~~W~~~~~ 441 (454)
.|+.|++|+....
T Consensus 378 ~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 378 GDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEEEEEC
T ss_pred CCCcEEECccccc
Confidence 9999999997643
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-43 Score=346.71 Aligned_cols=293 Identities=16% Similarity=0.227 Sum_probs=238.4
Q ss_pred EeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 133 CTKFNGKPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
...+.+ |...|++++|+|++. +|++|+.|++|++||..+++....+. +|...|.+++|+|++++|++|+.|
T Consensus 140 ~~~l~g--h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~------~H~~~V~~v~fspdg~~las~s~D 211 (611)
T 1nr0_A 140 NGNLTG--QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG------EHTKFVHSVRYNPDGSLFASTGGD 211 (611)
T ss_dssp CBCCCC--CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred cceecC--CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec------cccCceEEEEECCCCCEEEEEECC
Confidence 345778 999999999999987 69999999999999988776665554 688999999999999999999999
Q ss_pred CcEEEEeC-CCccEEeec-------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE----------------
Q psy17902 212 SNIKLWSS-SLEHLHTFT-------GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE---------------- 267 (454)
Q Consensus 212 g~v~vw~~-~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~---------------- 267 (454)
+.|++||+ ++..+..+. +|.+.|.+++|+|++++|++++.|++|++||+.+++++.
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 291 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGII 291 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEE
Confidence 99999998 666776663 799999999999999999999999999999998876543
Q ss_pred ---------------------------EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE--cccc----
Q psy17902 268 ---------------------------TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF--NGHS---- 314 (454)
Q Consensus 268 ---------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~---- 314 (454)
.+.+|...|++++|+|++++|++++.|+.|++||+.++..... ..|.
T Consensus 292 ~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~ 371 (611)
T 1nr0_A 292 WTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMIT 371 (611)
T ss_dssp ECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEE
T ss_pred EcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEE
Confidence 3347899999999999999999999999999999987654321 1111
Q ss_pred -----------------------------------------------------------------------------CCe
Q psy17902 315 -----------------------------------------------------------------------------RGI 317 (454)
Q Consensus 315 -----------------------------------------------------------------------------~~i 317 (454)
..+
T Consensus 372 ~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v 451 (611)
T 1nr0_A 372 GIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNS 451 (611)
T ss_dssp EEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCE
T ss_pred EEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCc
Confidence 122
Q ss_pred EEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-
Q psy17902 318 DMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP- 395 (454)
Q Consensus 318 ~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~- 395 (454)
.++.+ +++.+|++|+.|+.|++||+..+........ .|...|++++|+|+|++|++++.|++|++|++.+
T Consensus 452 ~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~--------~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~ 523 (611)
T 1nr0_A 452 SCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTI--------VHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN 523 (611)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEE--------ECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT
T ss_pred eEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeecc--------CCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC
Confidence 33333 4567888899999999999876543211111 1456699999999999999999999999999987
Q ss_pred CceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 396 KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 396 ~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
++.+.......|...|++++|+|||++|+++ +.|+.|++|+...+.
T Consensus 524 ~~~~~~~~~~~H~~~V~~v~fspdg~~lasg-s~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 524 FELAHTNSWTFHTAKVACVSWSPDNVRLATG-SLDNSVIVWNMNKPS 569 (611)
T ss_dssp TEESCCCCCCCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTCTT
T ss_pred CceeeeeeeeecccceeEEEECCCCCEEEEE-ECCCcEEEEECCCcc
Confidence 4444331111388999999999999999998 899999999986543
No 16
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-41 Score=312.43 Aligned_cols=298 Identities=21% Similarity=0.343 Sum_probs=248.8
Q ss_pred eeEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD 209 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 209 (454)
....+|+| |.+.|++|+|+|+ +++|+||+.||+|+|||+.+........ .....+|...|.+++|+|++++|++|+
T Consensus 29 ~l~~tL~G--H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~-~~~l~~h~~~V~~~~~s~dg~~l~s~~ 105 (340)
T 4aow_A 29 TLRGTLKG--HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIP-QRALRGHSHFVSDVVISSDGQFALSGS 105 (340)
T ss_dssp EEEEEECC--CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEE-EEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEECC--ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccee-eEEEeCCCCCEEEEEECCCCCEEEEEc
Confidence 35567999 9999999999997 6899999999999999998754322111 112236889999999999999999999
Q ss_pred CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE-EEeeccCCceeEEEeecCC--
Q psy17902 210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV-ETLFGHQSAITSLDILAKN-- 285 (454)
Q Consensus 210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~~~~~-- 285 (454)
.|+.|++|+. ..........+...+..+.+++++.+|++++.|+.+++||+...... ....+|...+.+++|++++
T Consensus 106 ~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 106 WDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSS
T ss_pred ccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCC
Confidence 9999999999 66666677788889999999999999999999999999999766543 3456799999999998765
Q ss_pred CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
.++++++.|+.|++||++++... .+.+|...|.++.+. ++.+|++++.||.|++||+.+..++..+..
T Consensus 186 ~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~---------- 255 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG---------- 255 (340)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC----------
T ss_pred cEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC----------
Confidence 57889999999999999998877 778899999888765 567899999999999999999988887763
Q ss_pred CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc-------CCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902 364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD-------IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW 436 (454)
Q Consensus 364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-------~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W 436 (454)
...+.++.|+|++.++ +++.|+.|++||+.++..+..+.. ..|...|++++|+|||++|+++ +.|+.|++|
T Consensus 256 ~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~Dg~v~iW 333 (340)
T 4aow_A 256 GDIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG-YTDNLVRVW 333 (340)
T ss_dssp SSCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE-ETTSCEEEE
T ss_pred CceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE-eCCCEEEEE
Confidence 2349999999988655 555699999999998766655542 2367889999999999999998 899999999
Q ss_pred eeeCCCe
Q psy17902 437 KTIKGVK 443 (454)
Q Consensus 437 ~~~~~~~ 443 (454)
++.+|.+
T Consensus 334 ~~~tGtr 340 (340)
T 4aow_A 334 QVTIGTR 340 (340)
T ss_dssp EEEC---
T ss_pred eCCCcCC
Confidence 9988764
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.7e-42 Score=338.43 Aligned_cols=282 Identities=23% Similarity=0.428 Sum_probs=251.9
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |...|.+++|+|++++|++++.||.|++||+..... ..+. .|...|.+++|+|++++|++|+.+
T Consensus 295 ~~~~~~~--h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~-~~~~------~~~~~v~~~~~s~~g~~l~~~~~d 365 (577)
T 2ymu_A 295 LLQTLTG--HSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL-QTLT------GHSSSVWGVAFSPDGQTIASASDD 365 (577)
T ss_dssp EEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE-EEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEec--CCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee-EEEe------CCCCCEEEEEECCCCCEEEEEeCC
Confidence 4567788 999999999999999999999999999999875443 2332 578899999999999999999999
Q ss_pred CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902 212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 291 (454)
|.|++|+.++..+..+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|+++
T Consensus 366 g~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~ 444 (577)
T 2ymu_A 366 KTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASA 444 (577)
T ss_dssp SEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEE
Confidence 9999999988999999999999999999999999999999999999996 467788889999999999999999999999
Q ss_pred eCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902 292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV 370 (454)
Q Consensus 292 ~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 370 (454)
+.|+.|++||+.......+.+|...+.++.+. ++.+|++++.|+.|++||. +++.+..+.. |...|+++
T Consensus 445 ~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~---------h~~~v~~l 514 (577)
T 2ymu_A 445 SDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG---------HSSSVRGV 514 (577)
T ss_dssp ETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC---------CSSCEEEE
T ss_pred cCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC---------CCCCEEEE
Confidence 99999999998766556888999999887765 5678999999999999995 5666666653 45559999
Q ss_pred EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902 371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~ 437 (454)
+|+|++++|++++.||.|++||. +++.+..+.. |.+.|++++|+|||++|+++ |.|+.|++||
T Consensus 515 ~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~--h~~~v~~~~fs~dg~~l~s~-~~D~~i~~Wd 577 (577)
T 2ymu_A 515 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVWGVAFSPDGQTIASA-SSDKTVKLWN 577 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TSCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSCEEEEC
T ss_pred EEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcC--CCCCEEEEEEcCCCCEEEEE-eCCCEEEEeC
Confidence 99999999999999999999996 5778888876 88999999999999999988 8999999997
No 18
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.6e-41 Score=308.17 Aligned_cols=283 Identities=17% Similarity=0.275 Sum_probs=245.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
|.+.|++++|+|++++|++++ ||.|++|++.+......+... ....|...|.+++|+|++++|++++.||.|++|++.
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQL-DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEE-ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECC
T ss_pred CCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecc-cccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 999999999999999999999 999999999876543332211 112477899999999999999999999999999993
Q ss_pred -Cc--cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902 221 -LE--HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSV 297 (454)
Q Consensus 221 -~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 297 (454)
.. ....+..|...|.+++|+|++++|++++.||.|++||+.+++.+..+..|...|.+++|+|++++|++++.||.|
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i 207 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV 207 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcE
Confidence 33 456778899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC
Q psy17902 298 RVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS 376 (454)
Q Consensus 298 ~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~ 376 (454)
++||++++.......+...+..+.+. ++..+++++.++.|++||+.+..... +. .|...|.+++|+|++
T Consensus 208 ~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~---------~~~~~v~~~~~~~~~ 277 (337)
T 1gxr_A 208 RSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH---------LHESCVLSLKFAYCG 277 (337)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-EC---------CCSSCEEEEEECTTS
T ss_pred EEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec---------CCccceeEEEECCCC
Confidence 99999999888666677777777664 67789999999999999998876432 21 245669999999999
Q ss_pred CEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 377 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
++|++++.||.|++|++.+++.+.... +...|++++|+|++++|+++ +.|+.|++|++.
T Consensus 278 ~~l~~~~~dg~i~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~ 336 (337)
T 1gxr_A 278 KWFVSTGKDNLLNAWRTPYGASIFQSK---ESSSVLSCDISVDDKYIVTG-SGDKKATVYEVI 336 (337)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSCEEEEE-ETTSCEEEEEEE
T ss_pred CEEEEecCCCcEEEEECCCCeEEEEec---CCCcEEEEEECCCCCEEEEe-cCCCeEEEEEEe
Confidence 999999999999999999988775543 67889999999999999998 799999999864
No 19
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.1e-41 Score=317.67 Aligned_cols=298 Identities=12% Similarity=0.133 Sum_probs=249.9
Q ss_pred eEeEeccCCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEec
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGD 209 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~ 209 (454)
....+.+ |.+.|++++|+|++ ++|++|+.||.|++||+.++.....+.. .+|...|.+++|+| ++.+|++++
T Consensus 65 ~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 65 LHRTASP--FDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQG----MGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp EEEEECC--CSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECC----CSTTCBEEEEEEETTEEEEEEEEE
T ss_pred eEEeccC--CCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeec----CCcCCceeEEEeCCCCCCEEEEEe
Confidence 4557778 99999999999998 9999999999999999998776554431 25888999999999 789999999
Q ss_pred CCCcEEEEeCCCccEEeeccc---CCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902 210 NNSNIKLWSSSLEHLHTFTGH---KAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 210 ~dg~v~vw~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 286 (454)
.|+.|++||+.+..+..+..| ...|.+++|+|++++|++|+.||.|++||+ ++..+..+.+|...|.+++|+|++.
T Consensus 139 ~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~ 217 (383)
T 3ei3_B 139 IRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCD 217 (383)
T ss_dssp TTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCT
T ss_pred CCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCC
Confidence 999999999977777776554 488999999999999999999999999999 5778888899999999999999998
Q ss_pred -EEEEeeCCCcEEEeeccC----CeEEEEccccCCeEEEEecC--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902 287 -VISSGGTDKSVRVWKIQE----ESQLVFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS 359 (454)
Q Consensus 287 -~l~~~~~dg~i~i~d~~~----~~~~~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 359 (454)
+|++++.|+.|++||+++ ...+....|...+.++.+.+ +.+|++++.|+.|++||+.++.....+........
T Consensus 218 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 218 WLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp TEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred CEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 999999999999999998 55665557888998888764 67899999999999999999887776653321100
Q ss_pred C--------CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902 360 S--------SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 360 ~--------~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
. -.....+..++|+|++.+ +|+.||.|++||+.+++.+..+....+.+.+..++|+|++++|+++ + |+
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~-s-d~ 373 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG-M-GF 373 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE-E-TT
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe-c-CC
Confidence 0 001123556777777777 8889999999999999999988875567788888999999999988 5 89
Q ss_pred ceeeeeeeC
Q psy17902 432 RFGRWKTIK 440 (454)
Q Consensus 432 ~i~~W~~~~ 440 (454)
.|++|+...
T Consensus 374 ~i~iw~~~~ 382 (383)
T 3ei3_B 374 NILIWNRED 382 (383)
T ss_dssp EEEEEECC-
T ss_pred cEEEEecCC
Confidence 999999753
No 20
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.1e-42 Score=319.10 Aligned_cols=302 Identities=15% Similarity=0.202 Sum_probs=249.7
Q ss_pred ccCceeEeEeccCCCCCCeEEEEEcCCCCEE-EEEeC---CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-
Q psy17902 127 ANATVVCTKFNGKPHRASITCIAVTSDSKHV-YSACK---DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN- 201 (454)
Q Consensus 127 ~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l-~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~- 201 (454)
..+......+.+ |...|++++|+|++..+ ++|+. ||.|++|++.++........ .|...|.+++|+|+
T Consensus 5 ~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~ 77 (357)
T 3i2n_A 5 EKPQIIAHIQKG--FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREI-----EKAKPIKCGTFGATS 77 (357)
T ss_dssp CCCCEEEEEEEE--CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEE-----EESSCEEEEECTTCC
T ss_pred ChhHHhhhhccC--CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeee-----cccCcEEEEEEcCCC
Confidence 345566677788 99999999999998655 55655 89999999998776543332 47789999999998
Q ss_pred --CcEEEEecCCCcEEEEeC-CCc-cEEeecccCCCeEEEEE------cCCCCEEEEEeCCCcEEEEeCCCce-eEEEee
Q psy17902 202 --NELVASGDNNSNIKLWSS-SLE-HLHTFTGHKAPITGLAI------SFECDTLYSSSNDRSIKVWNIEDRA-YVETLF 270 (454)
Q Consensus 202 --~~~l~~~~~dg~v~vw~~-~~~-~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~ 270 (454)
+.+|++|+.||.|++|++ ... .+..+.+|...|.++.| +|++++|++++.||.|++||+.++. .+..+.
T Consensus 78 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 157 (357)
T 3i2n_A 78 LQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANME 157 (357)
T ss_dssp TTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEEC
T ss_pred CCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceecc
Confidence 699999999999999999 444 78889999999999955 6789999999999999999999886 666776
Q ss_pred ccCC----ceeEEE----eecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec----CCCEEEEEeCCCCEE
Q psy17902 271 GHQS----AITSLD----ILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV----NDQQFITCGEDGTLS 338 (454)
Q Consensus 271 ~~~~----~v~~~~----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~----~~~~l~~~~~dg~i~ 338 (454)
.|.+ .|.+++ |+|++++|++++.||.|++||++++.......|...+.++.+. ++..|++++.||.|+
T Consensus 158 ~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 158 PVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp CCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred ccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 5554 789998 7789999999999999999999999988778888899888887 578999999999999
Q ss_pred EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCc-------------------e
Q psy17902 339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKR-------------------T 398 (454)
Q Consensus 339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~-------------------~ 398 (454)
+||+.++.+...+.... ...|...|++++|+|++. +|++|+.||.|++||+..+. .
T Consensus 238 i~d~~~~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~ 313 (357)
T 3i2n_A 238 VFDMRTQHPTKGFASVS----EKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSL 313 (357)
T ss_dssp EEEEEEEETTTEEEEEE----EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEE
T ss_pred EEeCcCCCcccceeeec----cCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccce
Confidence 99998887776654211 012456699999999998 89999999999999998653 3
Q ss_pred eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 399 LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 399 ~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
+..+.. |.+.|++++|+|++++|+++++.|+.|++|+....
T Consensus 314 ~~~~~~--~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 314 LQNVTL--STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp EEEEEC--CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred eecccc--CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 444444 78899999999999999954489999999998654
No 21
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-42 Score=321.05 Aligned_cols=292 Identities=16% Similarity=0.264 Sum_probs=245.3
Q ss_pred eEeccCCCCCCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----CcEE
Q psy17902 134 TKFNGKPHRASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----NELV 205 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l 205 (454)
....+ |.+.|++++|+|+ ...+++++.++.|++|++.++.....+.... ...|...|.+++|+|+ +.+|
T Consensus 12 ~~~~~--h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 12 SLKED--HNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYV-DADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EEECT--TCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEE-CSCTTCCEEEEEEEECTTTCCEEE
T ss_pred EeecC--CCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecc-ccCCCCcEEEEEeccCCCCCCCEE
Confidence 44557 9999999999984 5567777778899999999776654443211 1236678999999999 6799
Q ss_pred EEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEE
Q psy17902 206 ASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLD 280 (454)
Q Consensus 206 ~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~ 280 (454)
++|+.||.|++||+ ++..+..+.+|...|.+++|+| ++.+|++|+.||.|++||+.+++.+..+ .+|...|.+++
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 168 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSAD 168 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEE
Confidence 99999999999999 6788888999999999999999 8999999999999999999999988887 68999999999
Q ss_pred eecCCCEEEEeeCCCcEEEeeccCCeEE-----------------------------EEccccCCeEEEEecCCCEEEEE
Q psy17902 281 ILAKNRVISSGGTDKSVRVWKIQEESQL-----------------------------VFNGHSRGIDMTRRVNDQQFITC 331 (454)
Q Consensus 281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----------------------------~~~~~~~~i~~~~~~~~~~l~~~ 331 (454)
|+|++++|++++.||.|++||++++... ....|...+.++.+. +++++++
T Consensus 169 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~ 247 (366)
T 3k26_A 169 YDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSK 247 (366)
T ss_dssp ECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-CCEEEEE
Confidence 9999999999999999999999875433 122378888888887 7899999
Q ss_pred eCCCCEEEEecCCCcc--------------ceeeecccCCCCCCCCCCcEEEEEEecC--CCEEEEecCCCcEEEEEcCC
Q psy17902 332 GEDGTLSLWSILKKVP--------------THTIPVAHGYDSSSSEPNWITSVACLHN--SDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 332 ~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~~~~~~~~~i~~~~~s~~--~~~l~~~~~dg~v~iwd~~~ 395 (454)
+.||.|++||+.+... +..+. .|...|++++|+|+ +++|++|+.||.|++||+.+
T Consensus 248 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 248 SCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD---------YSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp CSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE---------CSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred ecCCEEEEEeCCCccccccccccCCcchheecccc---------ccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 9999999999987654 22222 24455889999999 99999999999999999998
Q ss_pred Ccee----eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 396 KRTL----EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 396 ~~~~----~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
+... ..+....+...|++++|+|++++|+++ +.|+.|++|+..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~ 365 (366)
T 3k26_A 319 EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAV-CDDASIWRWDRL 365 (366)
T ss_dssp SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEE-ETTSEEEEEEC-
T ss_pred CCCccccceEEcccccCCceEEEEeCCCCCeEEEE-eCCCEEEEEEec
Confidence 7543 356653347899999999999999998 899999999974
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8.4e-42 Score=337.15 Aligned_cols=292 Identities=14% Similarity=0.202 Sum_probs=249.6
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....|.+ |...|++++|+|+|++||+|+.||+|+|||+.++...... ....|..+|.+++|+|++++|++++.+
T Consensus 51 ~~~~~~~--h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~----~~~~~~~~v~~v~fs~dg~~l~~~~~~ 124 (611)
T 1nr0_A 51 DTEIYTE--HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT----TIPVFSGPVKDISWDSESKRIAAVGEG 124 (611)
T ss_dssp CCEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE----EEECSSSCEEEEEECTTSCEEEEEECC
T ss_pred cCeEecC--CCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeE----eecccCCceEEEEECCCCCEEEEEECC
Confidence 4567888 9999999999999999999999999999999754332111 112578899999999999999998765
Q ss_pred ----CcEEEEeCCCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC
Q psy17902 212 ----SNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 212 ----g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 286 (454)
+.|++||. +.....+.+|...|++++|+|++. .|++|+.|++|++||..+++++..+.+|...|++++|+|+++
T Consensus 125 ~~~~~~v~~wd~-~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 125 RERFGHVFLFDT-GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp SSCSEEEEETTT-CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCceeEEEEeeC-CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC
Confidence 47888884 556677899999999999999986 599999999999999999999999999999999999999999
Q ss_pred EEEEeeCCCcEEEeeccCCeEE-EEc-------cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCC
Q psy17902 287 VISSGGTDKSVRVWKIQEESQL-VFN-------GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY 357 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~-~~~-------~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 357 (454)
+|++++.|++|++||+.++... .+. +|...|.++.+. ++.+|++++.|++|++||+.+++.+..+.....
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~- 282 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR- 282 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC-
Confidence 9999999999999999988776 332 688889888776 567899999999999999999988887764322
Q ss_pred CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902 358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~ 437 (454)
+...+..+.| ++..|++++.||.|++|+...+.....+.+ |...|++++|+|+|++|+++ +.|+.|++|+
T Consensus 283 -----~~~~~~~~~~--~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g--h~~~v~~l~~spdg~~l~s~-s~D~~v~~Wd 352 (611)
T 1nr0_A 283 -----IEDQQLGIIW--TKQALVSISANGFINFVNPELGSIDQVRYG--HNKAITALSSSADGKTLFSA-DAEGHINSWD 352 (611)
T ss_dssp -----GGGCEEEEEE--CSSCEEEEETTCCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSCEEEEE
T ss_pred -----ccceeEEEEE--cCCEEEEEeCCCcEEEEeCCCCCcceEEcC--CCCCEEEEEEeCCCCEEEEE-eCCCcEEEEE
Confidence 1223566666 678999999999999999998887777765 88999999999999999999 8999999999
Q ss_pred eeCC
Q psy17902 438 TIKG 441 (454)
Q Consensus 438 ~~~~ 441 (454)
...+
T Consensus 353 ~~~~ 356 (611)
T 1nr0_A 353 ISTG 356 (611)
T ss_dssp TTTC
T ss_pred CCCC
Confidence 7654
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-41 Score=311.29 Aligned_cols=292 Identities=15% Similarity=0.221 Sum_probs=256.6
Q ss_pred cCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE
Q psy17902 128 NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS 207 (454)
Q Consensus 128 ~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 207 (454)
........|.+ |.+.|++++|+|++++|++|+.||.|++||+.++.....+. .|...|.+++|+|++++|++
T Consensus 20 G~~~~~~~l~~--h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s 91 (369)
T 3zwl_B 20 GSHMKAIKLTG--HERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLD------GHTGTIWSIDVDCFTKYCVT 91 (369)
T ss_dssp CCSEEEEEEEC--CSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEE
T ss_pred ccccccEEEEE--eeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhh------hcCCcEEEEEEcCCCCEEEE
Confidence 33446677888 99999999999999999999999999999999988877665 58889999999999999999
Q ss_pred ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCce-----------eEEEee
Q psy17902 208 GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRA-----------YVETLF 270 (454)
Q Consensus 208 ~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-----------~~~~~~ 270 (454)
++.||.|++||+ ++..+..+. |...|.+++|+|++.+|++++.+ |.|++||+.... .+..+.
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 170 (369)
T 3zwl_B 92 GSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII 170 (369)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc
Confidence 999999999999 566666666 88999999999999999999999 999999987653 334445
Q ss_pred ccCC--ceeEEEeecCCCEEEEeeCCCcEEEeeccC-CeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCC
Q psy17902 271 GHQS--AITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKK 345 (454)
Q Consensus 271 ~~~~--~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~ 345 (454)
.|.. .+.+++|+|++++|++++.||.|++||+++ .... .+..|...+.++.+. ++.+|++++.||.|++||+.++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 250 (369)
T 3zwl_B 171 THEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL 250 (369)
T ss_dssp CCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCC
Confidence 5666 899999999999999999999999999998 4555 677788888877765 5678999999999999999999
Q ss_pred ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC--------------cEEEEEcCCCceeeEeccCCCceee
Q psy17902 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG--------------CVKLWKITPKRTLEFLQDIPLSGVI 411 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--------------~v~iwd~~~~~~~~~~~~~~~~~~v 411 (454)
..+..+.. ...+.+++|+|++.++++++.++ .|++||+.+++.+..+.. |.+.|
T Consensus 251 ~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~v 318 (369)
T 3zwl_B 251 QVLKKYET----------DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQG--HFGPL 318 (369)
T ss_dssp CEEEEEEC----------SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEEC--CSSCE
T ss_pred ceeeeecC----------CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheec--ccCcE
Confidence 88888762 33499999999999999999988 899999999999888876 88999
Q ss_pred eEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 412 NSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 412 ~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
++++|+|++++|+++ +.|+.|++|+...+
T Consensus 319 ~~~~~s~~~~~l~s~-~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 319 NTVAISPQGTSYASG-GEDGFIRLHHFEKS 347 (369)
T ss_dssp EEEEECTTSSEEEEE-ETTSEEEEEEECHH
T ss_pred EEEEECCCCCEEEEE-cCCCeEEEEECccc
Confidence 999999999999998 89999999998653
No 24
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.9e-41 Score=304.76 Aligned_cols=285 Identities=18% Similarity=0.300 Sum_probs=248.2
Q ss_pred eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
...+.|.+ |.+.|++++| |++++|++|+.||.|++||+.+......+. .|...|.+++|+|++.+|++|+.
T Consensus 9 ~~~~~l~~--h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~ 79 (313)
T 3odt_A 9 QLSATLKG--HDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVY------TGQGFLNSVCYDSEKELLLFGGK 79 (313)
T ss_dssp EEEEEECC--CSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEE------ECSSCEEEEEEETTTTEEEEEET
T ss_pred HHHHHhhC--CCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEee------cCCccEEEEEECCCCCEEEEecC
Confidence 46778889 9999999999 999999999999999999998877665554 47889999999999999999999
Q ss_pred CCcEEEEeC----CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeec-CC
Q psy17902 211 NSNIKLWSS----SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA-KN 285 (454)
Q Consensus 211 dg~v~vw~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~ 285 (454)
||.|++|++ ....+..+..|...|.+++| ++++|++++.||.|++|| .+..+..+..|...|.++.|+| ++
T Consensus 80 dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 80 DTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp TSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTT
T ss_pred CCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCC
Confidence 999999998 23557788899999999999 577999999999999999 6777888889999999999998 88
Q ss_pred CEEEEeeCCCcEEEeeccCCeEEEEcc-ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQLVFNG-HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP 364 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 364 (454)
++|++++.||.|++||...... .+.. +...+.++.+.++..+++++.||.|++||+.+++++..+.. |.
T Consensus 156 ~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~---------~~ 225 (313)
T 3odt_A 156 NKFLTASADKTIKLWQNDKVIK-TFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEG---------HE 225 (313)
T ss_dssp TEEEEEETTSCEEEEETTEEEE-EECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEEC---------CS
T ss_pred CEEEEEECCCCEEEEecCceEE-EEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhc---------CC
Confidence 9999999999999999443222 4444 88889999888777799999999999999999988888764 34
Q ss_pred CcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
..|++++|+|++ .|++++.||.|++||+.+++.+..+.. +...|++++|+|+++ ++++ +.|+.|++|+...+..
T Consensus 226 ~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~~~-~~~~-~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 226 SFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITL--PAISIWSVDCMSNGD-IIVG-SSDNLVRIFSQEKSRW 299 (313)
T ss_dssp SCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEEC--SSSCEEEEEECTTSC-EEEE-ETTSCEEEEESCGGGC
T ss_pred ceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEec--cCceEEEEEEccCCC-EEEE-eCCCcEEEEeCCCCce
Confidence 559999999999 588999999999999999998888876 778999999999998 4455 7899999999876543
No 25
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-41 Score=319.25 Aligned_cols=304 Identities=13% Similarity=0.201 Sum_probs=249.4
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----C---cE
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----N---EL 204 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~---~~ 204 (454)
....+.+ |.+.|++++|+| ++|++|+.||.|++|++.+...............|...|.+++|+|+ + .+
T Consensus 8 ~~~~~~~--h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 8 TANAGKA--HDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEESSC--SSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhh--hhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 4667788 999999999999 89999999999999999987722111122222268889999999999 9 99
Q ss_pred EEEecCCCcEEEEeC-CCcc-----EEeeccc-----CCCeEEEEEc----CCCCE-EEEEeCCCcEEEEeCCC------
Q psy17902 205 VASGDNNSNIKLWSS-SLEH-----LHTFTGH-----KAPITGLAIS----FECDT-LYSSSNDRSIKVWNIED------ 262 (454)
Q Consensus 205 l~~~~~dg~v~vw~~-~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~dg~i~iwd~~~------ 262 (454)
|++++.||.|++|++ .... +..+..| ...|.+++|+ |++.+ |++++.||.|++||+.+
T Consensus 84 l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 999999999999999 4454 7888888 5999999999 99999 99999999999999998
Q ss_pred ceeEE-----Ee-------eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEcc---c---cCCeEEEEec
Q psy17902 263 RAYVE-----TL-------FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNG---H---SRGIDMTRRV 323 (454)
Q Consensus 263 ~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~---~---~~~i~~~~~~ 323 (454)
+..+. .+ ..|...|.+++|+|++ +|++++.||.|++||++++..+ .+.. | ...+.++.+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~ 242 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS 242 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC
Confidence 66655 66 3488999999999999 9999999999999999998877 5666 7 8888887776
Q ss_pred -CCCEEEEEeCC---CCEEEEecCCCccceeeecccCC----CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 324 -NDQQFITCGED---GTLSLWSILKKVPTHTIPVAHGY----DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 324 -~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
++.+|++++.| |.|++||+.+++++..+...... .....|...|.+++|+|++++|++++.||.|++||+.+
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 57789999999 99999999999888777541000 00001455699999999999999999999999999999
Q ss_pred CceeeEeccC----CC---------------ceeeeEEEEcCCC----------CEEEEEecCCCceeeeeeeCC
Q psy17902 396 KRTLEFLQDI----PL---------------SGVINSLVFTSDH----------KHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 396 ~~~~~~~~~~----~~---------------~~~v~~l~~s~d~----------~~l~~~~~~d~~i~~W~~~~~ 441 (454)
++.+..+... .| ...|++++|+|++ ++|+++ +.|+.|++|+...+
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~-~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 323 KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV-CLDRSIRWFREAGG 396 (397)
T ss_dssp TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEE-ETTTEEEEEEEEC-
T ss_pred CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEe-cCCCcEEEEEcCCC
Confidence 9888888711 15 8899999999998 688888 89999999998765
No 26
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-41 Score=320.08 Aligned_cols=287 Identities=18% Similarity=0.265 Sum_probs=243.8
Q ss_pred CCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEc----CCCce------ecccCCcc----cCCCCCCceEEEEEeCCCcEE
Q psy17902 141 HRASITCIAVTSDSK-HVYSACKDGIIIKWLL----ETRSK------VCSSPFVK----TDRKSYPPILALAVANNNELV 205 (454)
Q Consensus 141 h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~----~~~~~------~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l 205 (454)
|.+.|++++|+|+++ +||+|+.||.|++|++ .++.. ...+.... ...+|...|.+++|+|++++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 779999999999999 9999999999999999 77762 22221100 011256799999999999999
Q ss_pred EEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE------------------
Q psy17902 206 ASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE------------------ 267 (454)
Q Consensus 206 ~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~------------------ 267 (454)
++|+.||.|++|+.++..+..+..|...|.+++|+|++++|++++.||.|++||+.+++.+.
T Consensus 124 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (425)
T 1r5m_A 124 VTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHS 203 (425)
T ss_dssp EEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------------
T ss_pred EEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecccc
Confidence 99999999999999888999999999999999999999999999999999999998765443
Q ss_pred --------------------------------------EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-
Q psy17902 268 --------------------------------------TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL- 308 (454)
Q Consensus 268 --------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~- 308 (454)
.+..|...|.+++|+|++++|++++.|+.|++||++++...
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 283 (425)
T 1r5m_A 204 GDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN 283 (425)
T ss_dssp --CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE
T ss_pred CCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce
Confidence 23357788999999999999999999999999999987765
Q ss_pred EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE
Q psy17902 309 VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV 388 (454)
Q Consensus 309 ~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v 388 (454)
.+..|...+.++.+.++..+++++.||.|++||+.++..+..+.. |...|.+++|+|++++|++++.||.|
T Consensus 284 ~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------~~~~i~~~~~s~~~~~l~~~~~dg~i 354 (425)
T 1r5m_A 284 CFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV---------DGVPIFAGRISQDGQKYAVAFMDGQV 354 (425)
T ss_dssp EECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC---------TTCCEEEEEECTTSSEEEEEETTSCE
T ss_pred EecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc---------CCccEEEEEEcCCCCEEEEEECCCeE
Confidence 667788899888887766999999999999999999988877764 34459999999999999999999999
Q ss_pred EEEEcCCCc--------------------eeeEeccCCCce--eeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 389 KLWKITPKR--------------------TLEFLQDIPLSG--VINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 389 ~iwd~~~~~--------------------~~~~~~~~~~~~--~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
++|++.++. .+..+.. |.. .|++++|+|++++|+++ +.|+.|++|++.
T Consensus 355 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~iw~~~ 424 (425)
T 1r5m_A 355 NVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQS--SQDNDYIFDLSWNCAGNKISVA-YSLQEGSVVAIP 424 (425)
T ss_dssp EEEECHHHHC--------------CEECCEEEEECC--TTCCCCEEEEEECTTSSEEEEE-ESSSCCEEEECC
T ss_pred EEEECCCCccceeeeecccccccCcccchhhhhhcC--cccCCceEEEEccCCCceEEEE-ecCceEEEEeec
Confidence 999998877 6777765 544 89999999999999988 899999999864
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5e-41 Score=336.94 Aligned_cols=295 Identities=21% Similarity=0.331 Sum_probs=244.8
Q ss_pred ceeEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe
Q psy17902 130 TVVCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG 208 (454)
Q Consensus 130 ~~~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 208 (454)
......+.+ |.+.|++++|+|+ +++|++|+.||+|++|++......... ......+|...|.+++|+|++++|++|
T Consensus 372 l~~~~~l~~--H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~-~~~~~~~h~~~v~~v~~s~~g~~l~sg 448 (694)
T 3dm0_A 372 LVLKGTMRA--HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGV-AQRRLTGHSHFVEDVVLSSDGQFALSG 448 (694)
T ss_dssp SEEEEEEEC--CSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCE-EEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cchhhhccc--CCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccc-ccceecCCCCcEEEEEECCCCCEEEEE
Confidence 345567888 9999999999986 479999999999999999764321110 011123688999999999999999999
Q ss_pred cCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEEeecC
Q psy17902 209 DNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLDILAK 284 (454)
Q Consensus 209 ~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~~~~~ 284 (454)
+.||.|+|||+ ++..+..+.+|...|.+++|+|++++|++|+.|++|++||+......... .+|...|.+++|+|+
T Consensus 449 s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 528 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPN 528 (694)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSC
T ss_pred eCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCC
Confidence 99999999999 67778889999999999999999999999999999999998765433322 368899999999998
Q ss_pred C--CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902 285 N--RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS 360 (454)
Q Consensus 285 ~--~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 360 (454)
+ .+|++++.|+.|++||+++.... .+.+|...+.++.++ ++.+|++++.||.|++||+.+++.+..+..
T Consensus 529 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~------- 601 (694)
T 3dm0_A 529 TLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA------- 601 (694)
T ss_dssp SSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-------
T ss_pred CCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-------
Confidence 7 68999999999999999988776 788899999888776 567899999999999999999987766542
Q ss_pred CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC-----------------CceeeeEEEEcCCCCEE
Q psy17902 361 SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-----------------LSGVINSLVFTSDHKHL 423 (454)
Q Consensus 361 ~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-----------------~~~~v~~l~~s~d~~~l 423 (454)
...|.+++|+|++.+|++++ ++.|++||+.++..+..+.... +...+++++|+|+|++|
T Consensus 602 ---~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 602 ---NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp ---SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred ---CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 23499999999999888776 4569999999987776654311 11237899999999999
Q ss_pred EEEecCCCceeeeeee
Q psy17902 424 VAGIGTEHRFGRWKTI 439 (454)
Q Consensus 424 ~~~~~~d~~i~~W~~~ 439 (454)
+++ +.||.|++|++.
T Consensus 678 ~sg-s~Dg~i~iW~i~ 692 (694)
T 3dm0_A 678 FSG-YTDGVIRVWGIG 692 (694)
T ss_dssp EEE-ETTSEEEEEEC-
T ss_pred EEE-cCCCeEEEEecc
Confidence 998 899999999974
No 28
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.9e-41 Score=302.15 Aligned_cols=244 Identities=16% Similarity=0.278 Sum_probs=221.3
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV 266 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 266 (454)
+|...|.+++|+|++++|++|+.||.|++||+ ++..+..+..|..+|.+++|+|++++|++|+.|++|++||+.+++.+
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 68889999999999999999999999999999 67778889999999999999999999999999999999999999999
Q ss_pred EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEEEecC--CCEEEEEeCCCCEEEEec
Q psy17902 267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMTRRVN--DQQFITCGEDGTLSLWSI 342 (454)
Q Consensus 267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~~~~--~~~l~~~~~dg~i~iwd~ 342 (454)
..+.+|...|++++|+|++.+|++|+.|++|++||++++... .+.+|...+.++.+.+ +..|++|+.|+.|++||+
T Consensus 91 ~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 999999999999999999999999999999999999987443 6788999999988875 468999999999999999
Q ss_pred CCCccceeeecccCCCCCCCCCCcEEEEEEec--CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLH--NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH 420 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~ 420 (454)
....+...+...+ ...+..+.|+| ++.+|++|+.||+|++||+.+++.+..+.. |...|++++|+|++
T Consensus 171 ~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~--h~~~v~~~~~~p~~ 240 (304)
T 2ynn_A 171 GQSTPNFTLTTGQ--------ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG--HMSNVSFAVFHPTL 240 (304)
T ss_dssp TCSSCSEEEECCC--------TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECSSS
T ss_pred CCCCccceeccCC--------cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCC--CCCCEEEEEECCCC
Confidence 8887776665332 34488999987 678999999999999999999999988887 88999999999999
Q ss_pred CEEEEEecCCCceeeeeeeCCC
Q psy17902 421 KHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 421 ~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
++|+++ +.|+.|++|+..++.
T Consensus 241 ~~l~s~-s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 241 PIIISG-SEDGTLKIWNSSTYK 261 (304)
T ss_dssp SEEEEE-ETTSCEEEEETTTCC
T ss_pred CEEEEE-cCCCeEEEEECCCCc
Confidence 999988 899999999976543
No 29
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=300.88 Aligned_cols=246 Identities=17% Similarity=0.272 Sum_probs=224.6
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |...|.+++|+|++.++++++.||.|++||+.++..+..+. .+...+.+++|+|++++|++|+.+
T Consensus 72 ~~~~l~g--h~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~------~~~~~~~~~~~spdg~~l~~g~~d 143 (321)
T 3ow8_A 72 LQWSLEG--HQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSID------AGPVDAWTLAFSPDSQYLATGTHV 143 (321)
T ss_dssp EEEEECC--CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------CCTTCCCCEEECTTSSEEEEECTT
T ss_pred eeeeecc--CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEe------CCCccEEEEEECCCCCEEEEEcCC
Confidence 3456788 99999999999999999999999999999999988776654 466788999999999999999999
Q ss_pred CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902 212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS 290 (454)
Q Consensus 212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 290 (454)
|.|++|++ .+.....+..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|..+|++++|+|++++|++
T Consensus 144 g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s 223 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVT 223 (321)
T ss_dssp SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEE
T ss_pred CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEE
Confidence 99999999 67777888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902 291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT 368 (454)
Q Consensus 291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 368 (454)
|+.|+.|++||++++... .+.+|...+.++.+. ++.+|++++.|+.|++||+.++.++..+.. |...|.
T Consensus 224 ~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~---------h~~~v~ 294 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFD---------HQDQVW 294 (321)
T ss_dssp ECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---------CSSCEE
T ss_pred EcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcC---------CCCcEE
Confidence 999999999999988776 788899989887776 567899999999999999999988888753 445599
Q ss_pred EEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902 369 SVACLHNSDLVASGSYDGCVKLWKIT 394 (454)
Q Consensus 369 ~~~~s~~~~~l~~~~~dg~v~iwd~~ 394 (454)
+++|+|++.+|++++.||+|++||+.
T Consensus 295 ~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 295 GVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 99999999999999999999999963
No 30
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.7e-40 Score=321.89 Aligned_cols=283 Identities=24% Similarity=0.440 Sum_probs=250.6
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |...|++++|+|++++|++++.|+.|++|+... .....+. +|...|.+++|+|++.+|++++.|
T Consensus 254 ~~~~~~~--~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~-~~~~~~~------~h~~~v~~~~~~~~~~~l~t~~~d 324 (577)
T 2ymu_A 254 LLQTLTG--HSSSVNGVAFRPDGQTIASASDDKTVKLWNRNG-QLLQTLT------GHSSSVWGVAFSPDGQTIASASDD 324 (577)
T ss_dssp EEEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-CEEEEEC------CCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEEEec--CCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCC-cEEEEEe------cCCCCeEEEEECCCCCEEEEEeCC
Confidence 5567788 999999999999999999999999999999754 3333333 688899999999999999999999
Q ss_pred CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902 212 SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 212 g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 291 (454)
|.|++|+..+..+..+..|...|.+++|+|++.+|++++.||.|++||. +++.+..+.+|...|++++|+|++++|+++
T Consensus 325 ~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~ 403 (577)
T 2ymu_A 325 KTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASA 403 (577)
T ss_dssp SCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred CeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEE
Confidence 9999999988888999999999999999999999999999999999996 467788889999999999999999999999
Q ss_pred eCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902 292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV 370 (454)
Q Consensus 292 ~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 370 (454)
+.|+.|++||........+.+|...+.++.+. ++.+|++++.|+.|++||+ +++.+..+.. |...|+++
T Consensus 404 ~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~---------~~~~v~~~ 473 (577)
T 2ymu_A 404 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTG---------HSSSVRGV 473 (577)
T ss_dssp ETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEEC---------CSSCEEEE
T ss_pred eCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcC---------CCCCEEEE
Confidence 99999999997655555788899999877765 5678999999999999996 4455555543 45559999
Q ss_pred EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
+|+|++++|++++.|++|++|+. +++.+..+.. |...|++++|+|||++|+++ +.|+.|++|+.
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~--h~~~v~~l~~s~dg~~l~s~-~~dg~v~lwd~ 537 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQTIASA-SDDKTVKLWNR 537 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEET-TSCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSEEEEECT
T ss_pred EEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeC--CCCCEEEEEEcCCCCEEEEE-ECcCEEEEEeC
Confidence 99999999999999999999995 5778888876 88999999999999999998 89999999995
No 31
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-40 Score=312.06 Aligned_cols=245 Identities=21% Similarity=0.380 Sum_probs=224.6
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |.+.|++++|+|++++|++|+.||+|++||+.+...+..+. +|...|.+++|+|++.+|++|+.|
T Consensus 142 ~~~~l~~--h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~------~h~~~V~~v~~~p~~~~l~s~s~D 213 (410)
T 1vyh_C 142 FERTLKG--HTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMH------GHDHNVSSVSIMPNGDHIVSASRD 213 (410)
T ss_dssp CCEEECC--CSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCC------CCSSCEEEEEECSSSSEEEEEETT
T ss_pred EEEEEec--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEc------CCCCCEEEEEEeCCCCEEEEEeCC
Confidence 3567888 99999999999999999999999999999999888776665 688899999999999999999999
Q ss_pred CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC------
Q psy17902 212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK------ 284 (454)
Q Consensus 212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~------ 284 (454)
+.|++||+ ++..+..+.+|...|.++.|+|++.+|++|+.|+.|++||+.++.+...+.+|...|.+++|+|+
T Consensus 214 ~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 293 (410)
T 1vyh_C 214 KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSI 293 (410)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGG
T ss_pred CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccch
Confidence 99999999 77888899999999999999999999999999999999999999999999999999999999986
Q ss_pred --------------CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccc
Q psy17902 285 --------------NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPT 348 (454)
Q Consensus 285 --------------~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~ 348 (454)
+.+|++|+.|+.|++||++++..+ .+.+|...+.++.+. ++.+|++++.||.|++||+.++.++
T Consensus 294 ~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp GGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred hhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 678999999999999999998877 778899999877776 5678999999999999999999888
Q ss_pred eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902 349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393 (454)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~ 393 (454)
..+.. |...|++++|+|++.+|++|+.||+|++|++
T Consensus 374 ~~~~~---------h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 374 KTLNA---------HEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEEC---------CSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred EEEcC---------CCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 88764 4455999999999999999999999999986
No 32
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.4e-40 Score=305.40 Aligned_cols=283 Identities=13% Similarity=0.122 Sum_probs=237.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS 218 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~ 218 (454)
|.++|++++|+|++++|++|+.||.|++||+.++. ....+. .|...|.+++|+|++++|++++.||.|++|+
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 80 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK------EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWT 80 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE------CCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec------CCCCcccEEEEeCCCCEEEEEcCCCeEEEEE
Confidence 99999999999999999999999999999999876 444443 5888999999999999999999999999999
Q ss_pred C-CCcc--EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee---E-EEeeccCCceeEEEeecCCCEEEEe
Q psy17902 219 S-SLEH--LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY---V-ETLFGHQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 219 ~-~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~---~-~~~~~~~~~v~~~~~~~~~~~l~~~ 291 (454)
+ .+.. ...+..|...|.+++|+|++++|++++.||.|++||+..+.. . ....+|...|.+++|+|++++|+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 160 (372)
T 1k8k_C 81 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAG 160 (372)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEE
Confidence 9 4433 334467999999999999999999999999999999988762 2 2335689999999999999999999
Q ss_pred eCCCcEEEeecc------------------CCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceee
Q psy17902 292 GTDKSVRVWKIQ------------------EESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTI 351 (454)
Q Consensus 292 ~~dg~i~i~d~~------------------~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 351 (454)
+.||.|++||++ .+..+ .+..|...+.++.+. ++.+|++++.||.|++||+.+++++..+
T Consensus 161 ~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 240 (372)
T 1k8k_C 161 SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL 240 (372)
T ss_dssp ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEE
T ss_pred cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEE
Confidence 999999999964 44554 666888888888775 5679999999999999999999888887
Q ss_pred ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC--Cce--e----------------------------
Q psy17902 352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP--KRT--L---------------------------- 399 (454)
Q Consensus 352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~--~~~--~---------------------------- 399 (454)
.. |...|.+++|+|++.+|++| .||.|++|++.. +.. +
T Consensus 241 ~~---------~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
T 1k8k_C 241 AS---------ETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKAS 310 (372)
T ss_dssp EC---------SSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-
T ss_pred cc---------CCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccc
Confidence 64 33449999999999988888 899999999987 420 0
Q ss_pred --------eEeccCCCceeeeEEEEc-CCC---CEEEEEecCCCceeeeeeeCC
Q psy17902 400 --------EFLQDIPLSGVINSLVFT-SDH---KHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 400 --------~~~~~~~~~~~v~~l~~s-~d~---~~l~~~~~~d~~i~~W~~~~~ 441 (454)
..+. ..|..+|++++|+ ++| .+|+++ +.||.|++|+...+
T Consensus 311 ~~~~~~~~~~~~-~~h~~~v~~~~~~~~~g~~~~~l~s~-~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 311 SEGSAAAGAGLD-SLHKNSVSQISVLSGGKAKCSQFCTT-GMDGGMSIWDVRSL 362 (372)
T ss_dssp --------CCCS-SSSSSCEEEEEEEESTTTSCSEEEEE-ETTSEEEEEEHHHH
T ss_pred cccCcccccccc-ccccCCcceeEEecCCCcceeeEEEe-cCCCceEEEEecCh
Confidence 1121 1488899999966 666 899888 89999999997543
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-40 Score=315.52 Aligned_cols=295 Identities=14% Similarity=0.137 Sum_probs=231.4
Q ss_pred eEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCC
Q psy17902 134 TKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNN 211 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d 211 (454)
....+ |...|+||+|+| ++++||+|+.||.|+|||+.++.....+. ..+|...|++|+|+| ++.+|++|+.|
T Consensus 113 ~~~~~--~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~----~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 113 QKAAP--FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIK----GIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp CEEEE--CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEEC----CCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred ccCCC--CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEE----ccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 34455 999999999999 56799999999999999998765443322 236899999999998 68999999999
Q ss_pred CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCC-E
Q psy17902 212 SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR-V 287 (454)
Q Consensus 212 g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 287 (454)
|+|++||+.+..+..+.. +...+.+++|+|++.+|++|+.||.|++||++. +.+..+.+|...|++++|+|++. +
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~ 265 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWF 265 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSE
T ss_pred CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceE
Confidence 999999997666555443 345678999999999999999999999999974 55677889999999999999875 7
Q ss_pred EEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902 288 ISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS 362 (454)
Q Consensus 288 l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 362 (454)
|++|+.|+.|++||+++.... ...+|...|.++.+. ++.+|++++.||.|+|||+.++.....+..+.....
T Consensus 266 ~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~--- 342 (435)
T 4e54_B 266 LATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHF--- 342 (435)
T ss_dssp EEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCC---
T ss_pred EEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccc---
Confidence 889999999999999876543 446788889888765 578999999999999999998877666543221100
Q ss_pred CCCcEEEEEEecCCCEEEEec------------CCCcEEEEEcCCCceeeEeccCCCceeeeEE-EEcCCCCEEEEEecC
Q psy17902 363 EPNWITSVACLHNSDLVASGS------------YDGCVKLWKITPKRTLEFLQDIPLSGVINSL-VFTSDHKHLVAGIGT 429 (454)
Q Consensus 363 ~~~~i~~~~~s~~~~~l~~~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~~~~~~ 429 (454)
....+..+.|+|++.++++++ .++.|++||..+++.+..+.. .|...|.++ +|+|+|.+|+++ .
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~-~~~~~v~s~~~fspdg~~lasg--~ 419 (435)
T 4e54_B 343 QHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYD-PESSGISSLNEFNPMGDTLASA--M 419 (435)
T ss_dssp SSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECC-SSCCCCCCEEEECTTSSCEEEE--C
T ss_pred ccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeC-CCCCcEEEEEEECCCCCEEEEE--c
Confidence 111123345566555555543 345799999999988887754 367778887 699999999876 4
Q ss_pred CCceeeeeeeCC
Q psy17902 430 EHRFGRWKTIKG 441 (454)
Q Consensus 430 d~~i~~W~~~~~ 441 (454)
|+.|++|+...+
T Consensus 420 d~~i~iW~~~~g 431 (435)
T 4e54_B 420 GYHILIWSQQEA 431 (435)
T ss_dssp SSEEEECCCC--
T ss_pred CCcEEEEECCcC
Confidence 789999998765
No 34
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-39 Score=305.93 Aligned_cols=282 Identities=16% Similarity=0.266 Sum_probs=240.6
Q ss_pred CCCC--eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902 141 HRAS--ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS 218 (454)
Q Consensus 141 h~~~--V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~ 218 (454)
|... +.+++|++ ..+++++.||.|++|++.++........ .|...|.+++|+|++.+|++|+.||.|++||
T Consensus 90 ~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~-----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd 162 (401)
T 4aez_A 90 IIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAET-----DESTYVASVKWSHDGSFLSVGLGNGLVDIYD 162 (401)
T ss_dssp CCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEEC-----CTTCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeec-----CCCCCEEEEEECCCCCEEEEECCCCeEEEEE
Confidence 7665 45566665 5688889999999999999887665543 4778999999999999999999999999999
Q ss_pred C-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902 219 S-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE-DRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS 296 (454)
Q Consensus 219 ~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 296 (454)
+ .+..+..+..|...|.+++|+ +++|++|+.||.|++||+. ....+..+.+|...|.+++|+|++++|++|+.|+.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 163 VESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp TTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred CcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 9 678888999999999999994 6799999999999999998 56667888899999999999999999999999999
Q ss_pred EEEeeccCCeEE-EEccccCCeEEEEecC-C-CEEEEEe--CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902 297 VRVWKIQEESQL-VFNGHSRGIDMTRRVN-D-QQFITCG--EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA 371 (454)
Q Consensus 297 i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~-~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 371 (454)
|++||++++... .+..|...+.++.+.+ + ..+++++ .|+.|++||+.++.++..+.. ...|.+++
T Consensus 241 v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~----------~~~v~~~~ 310 (401)
T 4aez_A 241 VQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA----------GSQVTSLI 310 (401)
T ss_dssp EEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC----------SSCEEEEE
T ss_pred EEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC----------CCcEEEEE
Confidence 999999988777 6778888888888875 4 4556654 799999999999988887752 23499999
Q ss_pred EecCCCEEEE--ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 372 CLHNSDLVAS--GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 372 ~s~~~~~l~~--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
|+|++++|++ |+.||.|++|++.++..........|.+.|++++|+|+|++|+++ +.|+.|++|+...+.
T Consensus 311 ~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~-~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 311 WSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTA-ASDENLKFWRVYDGD 382 (401)
T ss_dssp ECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEE-CTTSEEEEEECCC--
T ss_pred ECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEE-eCCCcEEEEECCCCc
Confidence 9999999998 558999999999987655554333488999999999999999998 899999999987654
No 35
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-40 Score=313.53 Aligned_cols=298 Identities=14% Similarity=0.191 Sum_probs=241.8
Q ss_pred eeEeEe-ccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCC---Cceec-ccCCcccCCCCCCceEEEEEeCCCcE
Q psy17902 131 VVCTKF-NGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLET---RSKVC-SSPFVKTDRKSYPPILALAVANNNEL 204 (454)
Q Consensus 131 ~~~~~~-~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~---~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~ 204 (454)
..+..+ .+ |.+.|++++|+| ++++|++|+.||.|+|||+.+ +.... ... ..|...|.+++|+|++.+
T Consensus 53 ~~~~~~~~~--h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~ 125 (437)
T 3gre_A 53 KLIATLMEN--EPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT-----YDCSSTVTQITMIPNFDA 125 (437)
T ss_dssp CEEEEECTT--TTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE-----EECSSCEEEEEECTTSSE
T ss_pred eEEeeeccC--CCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee-----ccCCCCEEEEEEeCCCCE
Confidence 345566 78 999999999999 999999999999999999876 32111 111 147889999999999999
Q ss_pred EEEecCCCcEEEEeC----CCccEEeec----------c--cCCCeEEEE--EcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902 205 VASGDNNSNIKLWSS----SLEHLHTFT----------G--HKAPITGLA--ISFECDTLYSSSNDRSIKVWNIEDRAYV 266 (454)
Q Consensus 205 l~~~~~dg~v~vw~~----~~~~~~~~~----------~--~~~~v~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 266 (454)
|++|+.||.|++||+ .+..+..+. . +...+.++. +++++.+|++|+.||.|++||+.+++.+
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 999999999999998 333333222 1 556677777 5578999999999999999999999999
Q ss_pred EEeec--cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc-cccCCeEEEEec-----CCCEEEEEeCCCCE
Q psy17902 267 ETLFG--HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN-GHSRGIDMTRRV-----NDQQFITCGEDGTL 337 (454)
Q Consensus 267 ~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~-~~~~~i~~~~~~-----~~~~l~~~~~dg~i 337 (454)
..+.+ |...|++++|+|++++|++|+.||.|++||++++..+ .+. .|...+.++.+. ++.+|++++.||.|
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 99988 8999999999999999999999999999999998887 333 666778777544 24588999999999
Q ss_pred EEEecCCCccceeeecccCCCC---------------C--CCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee
Q psy17902 338 SLWSILKKVPTHTIPVAHGYDS---------------S--SSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE 400 (454)
Q Consensus 338 ~iwd~~~~~~~~~~~~~~~~~~---------------~--~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~ 400 (454)
++||+.++..+..+........ . ..|...|++++|+ ++++|++|+.||.|++||+.+++.+.
T Consensus 286 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~ 364 (437)
T 3gre_A 286 TIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSK 364 (437)
T ss_dssp EEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCE
T ss_pred EEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccce
Confidence 9999999988877764321100 0 1267779999999 77899999999999999999988777
Q ss_pred EeccC-----------------------------------CCceeeeEEEEcCC--CCEEEEEecCCCceeeee
Q psy17902 401 FLQDI-----------------------------------PLSGVINSLVFTSD--HKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 401 ~~~~~-----------------------------------~~~~~v~~l~~s~d--~~~l~~~~~~d~~i~~W~ 437 (454)
.+... .|...|++++|+++ +.+|+++ +.||.|++|+
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~-~~dG~I~iw~ 437 (437)
T 3gre_A 365 AVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVAC-DNSGLIGIFQ 437 (437)
T ss_dssp EEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEE-ETTSCEEEEC
T ss_pred EEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEE-cCCceEEEeC
Confidence 66542 17788999999998 6677777 8999999995
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-39 Score=294.90 Aligned_cols=257 Identities=17% Similarity=0.317 Sum_probs=220.8
Q ss_pred eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
.....|.+ |...|.+++|+|++++|++|+.||+|++||+.+++....+. +|...|.+++|+|++.+|++|+.
T Consensus 56 ~~~~~~~~--h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~s~ 127 (319)
T 3frx_A 56 VPVRSFKG--HSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFV------GHKSDVMSVDIDKKASMIISGSR 127 (319)
T ss_dssp EEEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEECTTSCEEEEEET
T ss_pred ccceEEeC--CcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEc------cCCCcEEEEEEcCCCCEEEEEeC
Confidence 35678889 99999999999999999999999999999999988776655 68899999999999999999999
Q ss_pred CCcEEEEeCCCccEEeecccCCCeEEEEEcCC------CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC
Q psy17902 211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFE------CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK 284 (454)
Q Consensus 211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 284 (454)
|+.|++||+.+..+..+.+|...|.++.|+|. +..|++++.|+.|++||+.+++....+.+|...|++++|+|+
T Consensus 128 D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~ 207 (319)
T 3frx_A 128 DKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPD 207 (319)
T ss_dssp TSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTT
T ss_pred CCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCC
Confidence 99999999988899999999999999999985 448999999999999999999999899999999999999999
Q ss_pred CCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902 285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP 364 (454)
Q Consensus 285 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 364 (454)
+++|++++.||.|++||+.+++.+....+...+..+.+.++..+++++.++.+++|++.....+..+..... .....+.
T Consensus 208 g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~-~~~~~~~ 286 (319)
T 3frx_A 208 GTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFA-GYSKAAE 286 (319)
T ss_dssp SSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCT-TCCGGGC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCcccc-ccccCcC
Confidence 999999999999999999999887444455677777776655555555566699999988766655542211 1111245
Q ss_pred CcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 365 NWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 365 ~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
..+.+++|+|+|++|++|+.||.|+||++.++
T Consensus 287 ~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 287 PHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred cceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 56999999999999999999999999998754
No 37
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.3e-39 Score=307.34 Aligned_cols=279 Identities=18% Similarity=0.233 Sum_probs=235.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLE 222 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~ 222 (454)
.+++++|+|++++|++++.||.|++||+.+......+. .+ ..+....|++++++|++|+.||.|++||+ .+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~------~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK------RA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL 130 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC------SC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe------cC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc
Confidence 35589999999999999999999999998766554433 23 44555678999999999999999999999 555
Q ss_pred cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902 223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI 302 (454)
Q Consensus 223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 302 (454)
....+..|...|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 210 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWEC 210 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeEC
Confidence 66666899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCeEE-EEcc---ccCCeEEEEe----------------------cCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902 303 QEESQL-VFNG---HSRGIDMTRR----------------------VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG 356 (454)
Q Consensus 303 ~~~~~~-~~~~---~~~~i~~~~~----------------------~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 356 (454)
++++.. .+.. +...+..+.+ +++.+|++++.||.|++||++++..+..+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-- 288 (420)
T 3vl1_A 211 GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSK-- 288 (420)
T ss_dssp TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCT--
T ss_pred CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccc--
Confidence 998877 4443 3444544443 35668999999999999999998877776432
Q ss_pred CCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCce-eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCcee
Q psy17902 357 YDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRT-LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFG 434 (454)
Q Consensus 357 ~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~ 434 (454)
|...|++++|+|++. +|++|+.||.|++||+.++.. +..+.. .+...|+++.| +++++|+++ +.|+.|+
T Consensus 289 ------~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~-~~~~~l~s~-~~d~~v~ 359 (420)
T 3vl1_A 289 ------FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI-NEGTPINNVYF-AAGALFVSS-GFDTSIK 359 (420)
T ss_dssp ------TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE-STTSCEEEEEE-ETTEEEEEE-TTTEEEE
T ss_pred ------cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc-cCCCCceEEEe-CCCCEEEEe-cCCccEE
Confidence 345599999999999 999999999999999998743 555554 25677888855 577888887 8999999
Q ss_pred eeeeeC
Q psy17902 435 RWKTIK 440 (454)
Q Consensus 435 ~W~~~~ 440 (454)
+|+...
T Consensus 360 iw~~~~ 365 (420)
T 3vl1_A 360 LDIISD 365 (420)
T ss_dssp EEEECC
T ss_pred EEeccC
Confidence 999865
No 38
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.7e-40 Score=299.81 Aligned_cols=295 Identities=13% Similarity=0.148 Sum_probs=250.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce---ecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK---VCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKL 216 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~v 216 (454)
|.+.|++++|+|++++|++++.||.|++|++.++.. ..... .|...|.+++|+|+++ +|++|+.||.|++
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL------RYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE------ECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee------ecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 999999999999999999999999999999987761 11111 5788999999999999 9999999999999
Q ss_pred EeC-CCccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC---------ceeEEEeeccCCceeEEEeecC
Q psy17902 217 WSS-SLEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIED---------RAYVETLFGHQSAITSLDILAK 284 (454)
Q Consensus 217 w~~-~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~~~~~~~ 284 (454)
|++ .......+.. |...|.+++|+| +.+|++++.|+.|++||+.+ ++.+..+. |...|.+++|+|+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSS 161 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSS
T ss_pred EEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCC
Confidence 999 8888888999 999999999999 99999999999999999987 66666665 8899999999987
Q ss_pred CCEEEEeeCCCcEEEeeccC-CeEE---EEccccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCC------ccceeee
Q psy17902 285 NRVISSGGTDKSVRVWKIQE-ESQL---VFNGHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKK------VPTHTIP 352 (454)
Q Consensus 285 ~~~l~~~~~dg~i~i~d~~~-~~~~---~~~~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~------~~~~~~~ 352 (454)
+ +++++.++.|++||+++ .... ....+...+.++.+. ++.++++++.||.|++|++... .....+.
T Consensus 162 ~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 162 R--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp E--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred c--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeee
Confidence 7 88999999999999998 4432 555677788887776 4789999999999999999887 6666666
Q ss_pred cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCC-ceeeeEEEEcCCCCEEEEEecCCC
Q psy17902 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL-SGVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
.+........|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.. | .++|++++ |++++|+++ +.|+
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--~h~~~v~~~~--~~~~~l~s~-s~Dg 314 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK--FNEDSVVKIA--CSDNILCLA-TSDD 314 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC--CSSSEEEEEE--ECSSEEEEE-EECT
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc--ccCCCceEec--CCCCeEEEE-ecCC
Confidence 5433222223455799999999999999999999999999999998888876 5 88999999 999999999 7899
Q ss_pred c-eeeee---eeCCCeeEEEEEE
Q psy17902 432 R-FGRWK---TIKGVKNTVAIID 450 (454)
Q Consensus 432 ~-i~~W~---~~~~~~~~~~~~~ 450 (454)
. ...|. ......+.+++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~i~~~~ 337 (342)
T 1yfq_A 315 TFKTNAAIDQTIELNASSIYIIF 337 (342)
T ss_dssp HHHHCSSSCTTSCCCCCEEEEEE
T ss_pred cccccccccccCCCCCceEEEec
Confidence 8 66666 3455566777765
No 39
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=297.28 Aligned_cols=243 Identities=16% Similarity=0.193 Sum_probs=205.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS- 219 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~- 219 (454)
|...|++++|+|++ .|++|+.||.|+|||+.+++....... ...+|...|++++|+|++++|++|+.||.|++||+
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~--~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKF--CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEE--EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeec--cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 67789999999984 788999999999999998765443221 11268889999999999999999999999999999
Q ss_pred CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecC-CCEEEEeeCCC
Q psy17902 220 SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAK-NRVISSGGTDK 295 (454)
Q Consensus 220 ~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~-~~~l~~~~~dg 295 (454)
++..+..+.+|...|++++|++++ .+|++|+.|++|++||+++++.+..+. .|...+.+++|+|+ +++|++|+.||
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 778889999999999999999987 478999999999999999998887764 45667999999985 57889999999
Q ss_pred cEEEeeccCCeEE-EEccccCCeEEEEecC-C-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902 296 SVRVWKIQEESQL-VFNGHSRGIDMTRRVN-D-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372 (454)
Q Consensus 296 ~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 372 (454)
.|++||+++++.+ .+.+|...|.++.+.+ + .+|++|+.|++|+|||+.+++.... . .|...|++++|
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~-~---------~H~~~V~~v~~ 307 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRS-Q---------AHRDFVRDATW 307 (344)
T ss_dssp EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEE-C---------CCSSCEEEEEE
T ss_pred cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEE-c---------CCCCCEEEEEE
Confidence 9999999988776 7889999999888875 3 4688999999999999988865432 1 25667999999
Q ss_pred ecCCC-EEEEecCCCcEEEEEcCCC
Q psy17902 373 LHNSD-LVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 373 s~~~~-~l~~~~~dg~v~iwd~~~~ 396 (454)
+|++. +|++|+.||+|++|++.+.
T Consensus 308 sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 308 SPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CSSSTTEEEEEETTSCEEEEECCC-
T ss_pred eCCCCeEEEEEcCCCeEEEEECCCC
Confidence 99886 6789999999999999765
No 40
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-40 Score=313.55 Aligned_cols=285 Identities=14% Similarity=0.229 Sum_probs=241.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC----CceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLET----RSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIK 215 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~ 215 (454)
|...|++++|+|++++|++|+.||.|++|++.+ ......+. .|...|.+++|+|+ +.+|++++.||.|+
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~l~s~~~dg~v~ 139 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS------NHSSSVKTVKFNAKQDNVLASGGNNGEIF 139 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC------CSSSCCCEEEECSSSTTBEEEECSSSCEE
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc------CCccceEEEEEcCCCCCEEEEEcCCCeEE
Confidence 889999999999999999999999999999987 23444333 68889999999998 89999999999999
Q ss_pred EEeC-CCc------cE---EeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeecc------CCceeE
Q psy17902 216 LWSS-SLE------HL---HTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGH------QSAITS 278 (454)
Q Consensus 216 vw~~-~~~------~~---~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------~~~v~~ 278 (454)
+||+ ... .. ..+..|...|.+++|+|+ +.+|++++.||.|++||+.+++.+..+..| ...|.+
T Consensus 140 iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 219 (416)
T 2pm9_A 140 IWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSV 219 (416)
T ss_dssp BCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEE
T ss_pred EEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEE
Confidence 9999 333 22 234679999999999998 789999999999999999999998888766 789999
Q ss_pred EEeecCC-CEEEEeeCCC---cEEEeeccCCe-EE-EEc-cccCCeEEEEec--CCCEEEEEeCCCCEEEEecCCCccce
Q psy17902 279 LDILAKN-RVISSGGTDK---SVRVWKIQEES-QL-VFN-GHSRGIDMTRRV--NDQQFITCGEDGTLSLWSILKKVPTH 349 (454)
Q Consensus 279 ~~~~~~~-~~l~~~~~dg---~i~i~d~~~~~-~~-~~~-~~~~~i~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~ 349 (454)
++|+|++ .+|++++.|+ .|++||++++. .. .+. +|...+.++.+. ++.+|++++.||.|++||+.+++++.
T Consensus 220 ~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 220 VEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEE
T ss_pred EEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccce
Confidence 9999997 6899999998 99999999863 33 555 788899888876 47789999999999999999998888
Q ss_pred eeecccCCCCCCCCCCcEEEEEEecCC-CEEEEecCCCcEEEEEcCCCceeeEecc------------------------
Q psy17902 350 TIPVAHGYDSSSSEPNWITSVACLHNS-DLVASGSYDGCVKLWKITPKRTLEFLQD------------------------ 404 (454)
Q Consensus 350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~------------------------ 404 (454)
.+.. |...|.+++|+|++ .+|++++.||.|++|++.++........
T Consensus 300 ~~~~---------~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (416)
T 2pm9_A 300 QFPA---------RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEK 370 (416)
T ss_dssp EEEC---------SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSC
T ss_pred eecC---------CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccc
Confidence 8764 34459999999999 8999999999999999987643322110
Q ss_pred ---------CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 405 ---------IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 405 ---------~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
..+..++++++|+|+|++|+++ +.|+.|++|++.++
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~-~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 371 PSVFHLQAPTWYGEPSPAAHWAFGGKLVQIT-PDGKGVSITNPKIS 415 (416)
T ss_dssp CCSSCCCCCSTTCCCSCCCEEETTTEEECBC-TTSSCBCCBCCCCC
T ss_pred cccccccCCccccCCccceEEeeCCeEEEEe-CCCCeEEEEEeccC
Confidence 0145678899999999999988 89999999998654
No 41
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-40 Score=312.18 Aligned_cols=287 Identities=15% Similarity=0.240 Sum_probs=241.7
Q ss_pred CCCCeEEEEEcCCCC-EEEEE----------eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902 141 HRASITCIAVTSDSK-HVYSA----------CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD 209 (454)
Q Consensus 141 h~~~V~~~~~s~~~~-~l~~~----------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 209 (454)
+...|.+++|+|++. +|++| +.||.|++|++.++........ ..|...|.+++|+|++.+|++|+
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS----LQVDSKFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC----CCCSSCEEEEEECSSSSCEEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE----EecCCceEEEEECCCCCeEEEEc
Confidence 344689999999987 99999 8899999999988653211111 14778999999999999999999
Q ss_pred CCCcEEEEeCCC-----ccEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCce------eEEE---eeccCC
Q psy17902 210 NNSNIKLWSSSL-----EHLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRA------YVET---LFGHQS 274 (454)
Q Consensus 210 ~dg~v~vw~~~~-----~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~------~~~~---~~~~~~ 274 (454)
.||.|++|++.. ..+..+..|...|.+++|+|+ +.+|++++.||.|++||+.++. .... +..|..
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 999999999944 478888999999999999998 8999999999999999999876 3322 357999
Q ss_pred ceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE-EEccc------cCCeEEEEecCC--CEEEEEeCCC---CEEEEe
Q psy17902 275 AITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL-VFNGH------SRGIDMTRRVND--QQFITCGEDG---TLSLWS 341 (454)
Q Consensus 275 ~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~------~~~i~~~~~~~~--~~l~~~~~dg---~i~iwd 341 (454)
.|.+++|+|+ +.+|++++.|+.|++||++++... .+..+ ...+.++.+.++ .++++++.|+ .|++||
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d 246 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWD 246 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEe
Confidence 9999999999 789999999999999999998877 44444 677888887764 4899999998 999999
Q ss_pred cCCC-ccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902 342 ILKK-VPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD 419 (454)
Q Consensus 342 ~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 419 (454)
++++ .++..+.. .|...|.+++|+| ++.+|++++.||.|++||+.+++.+..+.. |.+.|++++|+|+
T Consensus 247 ~~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~--~~~~v~~~~~s~~ 316 (416)
T 2pm9_A 247 LRNANTPLQTLNQ--------GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA--RGNWCFKTKFAPE 316 (416)
T ss_dssp TTSTTSCSBCCCS--------CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC--SSSCCCCEEECTT
T ss_pred CCCCCCCcEEeec--------CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC--CCCceEEEEECCC
Confidence 9886 44444331 2455699999999 999999999999999999999999888876 7889999999999
Q ss_pred C-CEEEEEecCCCceeeeeeeCCC
Q psy17902 420 H-KHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 420 ~-~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+ .+|+++ +.|+.|++|+.....
T Consensus 317 ~~~~l~s~-~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 317 APDLFACA-SFDNKIEVQTLQNLT 339 (416)
T ss_dssp CTTEEEEC-CSSSEEEEEESCCCC
T ss_pred CCCEEEEE-ecCCcEEEEEccCCC
Confidence 9 677777 899999999986544
No 42
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2e-39 Score=331.88 Aligned_cols=289 Identities=19% Similarity=0.311 Sum_probs=253.2
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
..+.|.+ |.+.|++++|+|++++|++|+.||.|+|||+.++.....+. .|..+|.+++|+|++++|++|+.|
T Consensus 5 ~~~~~~~--h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 5 IKKTFSN--RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQ------VTETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp CEEEEEE--ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred cceeeec--CCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEe------cCCCcEEEEEEeCCCCEEEEEeCC
Confidence 4567888 99999999999999999999999999999999988777665 588899999999999999999999
Q ss_pred CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeec-CCCEE
Q psy17902 212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILA-KNRVI 288 (454)
Q Consensus 212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l 288 (454)
|.|++|++ ++..+..+.+|...|++++|+|++++|++++.||.|++||+.++ .....+.+|...|.+++|+| ++.+|
T Consensus 77 g~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l 156 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (814)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEE
Confidence 99999999 77888899999999999999999999999999999999999887 66778889999999999999 78999
Q ss_pred EEeeCCCcEEEeeccCCeEE-EEc-cccCCeEEEEec---CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902 289 SSGGTDKSVRVWKIQEESQL-VFN-GHSRGIDMTRRV---NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~-~~~-~~~~~i~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
++++.||.|++||+.++... .+. .+...+.++.+. ++.++++++.||.|++||+.++..+..+.. |
T Consensus 157 ~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---------~ 227 (814)
T 3mkq_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---------H 227 (814)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC---------C
T ss_pred EEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC---------C
Confidence 99999999999999876654 333 343667666665 577999999999999999999988877753 3
Q ss_pred CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE-EEEecCCCceeeeeeeC
Q psy17902 364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL-VAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l-~~~~~~d~~i~~W~~~~ 440 (454)
...|++++|+|++++|++++.||.|++||+.+++.+..+.. +...+.+++|+|++..+ +++ +.++.+.+|+...
T Consensus 228 ~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 228 MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNV--GLERSWCIATHPTGRKNYIAS-GFDNGFTVLSLGN 302 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECC--SSSSEEEEEECTTCGGGEEEE-EETTEEEEEECSC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeec--CCCcEEEEEEccCCCceEEEE-EeCCCEEEEEcCC
Confidence 44599999999999999999999999999999988888876 67889999999999853 333 4677788888654
No 43
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-40 Score=308.29 Aligned_cols=281 Identities=13% Similarity=0.077 Sum_probs=222.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS 218 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~ 218 (454)
|.++|++++|+|++++|++|+.||.|++|++.++ .....+. +|...|.+++|+|++++|++|+.||.|++||
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd 83 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFS------DHDKIVTCVDWAPKSNRIVTCSQDRNAYVYE 83 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBC------CCSSCEEEEEECTTTCCEEEEETTSSEEEC-
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEe------cCCceEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 7889999999999999999999999999999987 4444444 6889999999999999999999999999999
Q ss_pred CC-Cc---cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce---eEEEeec-cCCceeEEEeecCCCEEEE
Q psy17902 219 SS-LE---HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA---YVETLFG-HQSAITSLDILAKNRVISS 290 (454)
Q Consensus 219 ~~-~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~ 290 (454)
+. +. ....+..|...|.+++|+|++++|++++.|+.|++||+.++. ....+.. |...|++++|+|++++|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 84 KRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAA 163 (377)
T ss_dssp -----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEE
T ss_pred cCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEE
Confidence 93 33 577788999999999999999999999999999999999887 3667777 9999999999999999999
Q ss_pred eeCCCcEEEeeccC------------------CeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcc----
Q psy17902 291 GGTDKSVRVWKIQE------------------ESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVP---- 347 (454)
Q Consensus 291 ~~~dg~i~i~d~~~------------------~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~---- 347 (454)
++.|+.|++||+.. +.......|...+.++.+. ++.+|++++.||.|++||+.++..
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 243 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRA 243 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCccee
Confidence 99999999999852 3333222788888887776 567899999999999999998877
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc--eeeE------------------------
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR--TLEF------------------------ 401 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~--~~~~------------------------ 401 (454)
+..+.. |...|.+++|+|++++|++|+.++.+ +|+..... ....
T Consensus 244 ~~~~~~---------~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (377)
T 3dwl_C 244 LITVKL---------SQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEG 313 (377)
T ss_dssp CCCEEC---------SSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--
T ss_pred eEeecC---------CCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccc
Confidence 444443 45569999999999999999877655 77654211 0000
Q ss_pred ----------ec--------------cCCCceeeeEEEEcCCCC----EEEEEecCCCceeeeee
Q psy17902 402 ----------LQ--------------DIPLSGVINSLVFTSDHK----HLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 402 ----------~~--------------~~~~~~~v~~l~~s~d~~----~l~~~~~~d~~i~~W~~ 438 (454)
+. ...|.+.|+++++.+... .|+++ |.||.|++|++
T Consensus 314 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~-g~Dg~i~iWdl 377 (377)
T 3dwl_C 314 PVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSS-GTDGRVVLWTL 377 (377)
T ss_dssp -----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEE-ETTSEEEEECC
T ss_pred ccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEee-cCCCcEEEecC
Confidence 00 012788899999766543 47777 89999999984
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.1e-39 Score=301.65 Aligned_cols=279 Identities=15% Similarity=0.191 Sum_probs=232.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL 221 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~ 221 (454)
..+....|+|++++|++|+.||.|++||+.++.....+. .|...|.+++|+|++++|++|+.||.|++||+ ++
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ------AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT------SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc------cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 445556789999999999999999999999887766554 68899999999999999999999999999999 67
Q ss_pred ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec---cCC---------------------cee
Q psy17902 222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG---HQS---------------------AIT 277 (454)
Q Consensus 222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~---------------------~v~ 277 (454)
..+..+.+|...|.+++|+|++++|++++.||.|++||+.+++.+..+.. |.. .+.
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 78888999999999999999999999999999999999999998888764 333 444
Q ss_pred EEEeecCCCEEEEeeCCCcEEEeeccCCeEE-E-EccccCCeEEEEecC-CC-EEEEEeCCCCEEEEecCCCcc-ceeee
Q psy17902 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL-V-FNGHSRGIDMTRRVN-DQ-QFITCGEDGTLSLWSILKKVP-THTIP 352 (454)
Q Consensus 278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~-~~~~~~~i~~~~~~~-~~-~l~~~~~dg~i~iwd~~~~~~-~~~~~ 352 (454)
+++|+|++++|++++.||.|++||++++... . ...|...+.++.+.+ +. +|++++.||.|++||+.++.. +..+.
T Consensus 252 ~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp TTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred ceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh
Confidence 4556788999999999999999999998776 3 345677888877765 44 899999999999999998754 56665
Q ss_pred cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce---------eeEeccCCCceeeeEEEEcCCCC--
Q psy17902 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT---------LEFLQDIPLSGVINSLVFTSDHK-- 421 (454)
Q Consensus 353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~---------~~~~~~~~~~~~v~~l~~s~d~~-- 421 (454)
..+ ...|.++.+ +++.+|++++.||.|++|++..... ...+. .+.+.|.+++|+|++.
T Consensus 332 ~~~--------~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~ 400 (420)
T 3vl1_A 332 INE--------GTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLV--SNDDAVSQFCYVSDDESN 400 (420)
T ss_dssp EST--------TSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEEC--CSSCCCCEEEEECCSSSS
T ss_pred ccC--------CCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEc--cCCcceEEEEEccCCCCc
Confidence 433 334888855 5788999999999999999987421 11222 3678899999999999
Q ss_pred -EEEEEecCCCceeeeeee
Q psy17902 422 -HLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 422 -~l~~~~~~d~~i~~W~~~ 439 (454)
.|+++ |.+|.+.+|+..
T Consensus 401 g~l~a~-g~~g~~~~~~~~ 418 (420)
T 3vl1_A 401 GEVLEV-GKNNFCALYNLS 418 (420)
T ss_dssp CEEEEE-ETTTEEEEEESC
T ss_pred ceEEEE-cCCceEEEEecc
Confidence 77777 689999999875
No 45
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.9e-38 Score=288.41 Aligned_cols=244 Identities=18% Similarity=0.337 Sum_probs=216.9
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR--- 263 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--- 263 (454)
+|...|.+++|+|++++|++|+.||.|++||+ ++..+..+..|...|.+++|+|++++|++|+.|+.|++|++.+.
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 68899999999999999999999999999999 77888889999999999999999999999999999999999875
Q ss_pred -eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEE
Q psy17902 264 -AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLW 340 (454)
Q Consensus 264 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iw 340 (454)
.....+.+|...|.++.|++++. +++++.|+.|++||+.++... .+.+|...+.++.+. ++.+|++|+.|+.|++|
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w 211 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 35567789999999999998765 888999999999999998877 778899999888776 46789999999999999
Q ss_pred ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902 341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH 420 (454)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~ 420 (454)
|++++.+...+.. |...|++++|+|++++|++|+.||+|++||+.++..+..+....+...|++++|+|+|
T Consensus 212 d~~~~~~~~~~~~---------h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g 282 (340)
T 1got_B 212 DVREGMCRQTFTG---------HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSG 282 (340)
T ss_dssp ETTTCSEEEEECC---------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS
T ss_pred ECCCCeeEEEEcC---------CcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCC
Confidence 9999888777653 4555999999999999999999999999999988877766543345679999999999
Q ss_pred CEEEEEecCCCceeeeeeeCCC
Q psy17902 421 KHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 421 ~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
++|+++ +.|+.|++|+...+.
T Consensus 283 ~~l~~g-~~d~~i~vwd~~~~~ 303 (340)
T 1got_B 283 RLLLAG-YDDFNCNVWDALKAD 303 (340)
T ss_dssp SEEEEE-ETTSEEEEEETTTCC
T ss_pred CEEEEE-CCCCeEEEEEcccCc
Confidence 999999 899999999976543
No 46
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.1e-38 Score=296.90 Aligned_cols=276 Identities=17% Similarity=0.291 Sum_probs=237.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLE 222 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~ 222 (454)
.++.|+||++ ++||+|. |++|+|||..+++....+.. ..|...|++++|+|+|++|++|+.||.|+|||+ +++
T Consensus 107 y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~----~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~ 180 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQM----EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK 180 (420)
T ss_dssp TCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEEC----CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred cceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEe----cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc
Confidence 4678999975 6888775 89999999999887654432 257778999999999999999999999999999 778
Q ss_pred cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902 223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301 (454)
Q Consensus 223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 301 (454)
.+..+.+|...+.+++++ +.+|++|+.|+.+++||.... ..+..+.+|...+..+.|+|++.++++++.|+.|++|+
T Consensus 181 ~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~ 258 (420)
T 4gga_A 181 RLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWP 258 (420)
T ss_dssp EEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEe
Confidence 889999999999998875 679999999999999998864 45677889999999999999999999999999999999
Q ss_pred ccCCeE-----EEEccccCCeEEEEecC--CCEEEEE--eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902 302 IQEESQ-----LVFNGHSRGIDMTRRVN--DQQFITC--GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372 (454)
Q Consensus 302 ~~~~~~-----~~~~~~~~~i~~~~~~~--~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 372 (454)
..++.. .....|...+.++.+.+ ...++++ +.|++|++||+.++.+...+... ..+.++.|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~----------~~v~~~~~ 328 (420)
T 4gga_A 259 SAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH----------SQVCSILW 328 (420)
T ss_dssp SSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS----------SCEEEEEE
T ss_pred eccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc----------cceeeeee
Confidence 987653 26677888888887764 3455543 47999999999999988887643 23899999
Q ss_pred ecCCCEEEEec--CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 373 LHNSDLVASGS--YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 373 s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
+|+++.|++++ .||.|+|||+.+++++..+.+ |.+.|++++|+|||++|+++ |.|++|++|++..
T Consensus 329 ~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g--H~~~V~~l~~spdg~~l~S~-s~D~tvriWdv~~ 395 (420)
T 4gga_A 329 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASA-AADETLRLWRCFE 395 (420)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEE-ETTTEEEEECCSC
T ss_pred cCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEE-ecCCeEEEEECCC
Confidence 99999887654 799999999999999999987 88999999999999999998 8999999999754
No 47
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.5e-38 Score=283.96 Aligned_cols=251 Identities=16% Similarity=0.231 Sum_probs=207.3
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCC--CcEEEEec
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANN--NELVASGD 209 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~ 209 (454)
..+.+ |.+.|++++|+|+|++||+|+.||+|+||++.+. .....+ .+|..+|.+++|+++ +++|++|+
T Consensus 3 ~~~~~--h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l------~gH~~~V~~v~~s~~~~g~~l~s~s 74 (297)
T 2pm7_B 3 VIANA--HNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTL------TGHEGPVWRVDWAHPKFGTILASCS 74 (297)
T ss_dssp EECCS--CSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEE------CCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred eeccC--CcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEE------ccccCCeEEEEecCCCcCCEEEEEc
Confidence 35667 9999999999999999999999999999999753 223333 379999999999863 89999999
Q ss_pred CCCcEEEEeCCC---ccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEee
Q psy17902 210 NNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDIL 282 (454)
Q Consensus 210 ~dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~ 282 (454)
.||+|++||+.. ..+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.++. ....+.+|...|.+++|+
T Consensus 75 ~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 75 YDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp TTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred CCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeec
Confidence 999999999943 356677889999999999997 8899999999999999998763 235667899999999999
Q ss_pred cC-------------CCEEEEeeCCCcEEEeeccCCe----EE-EEccccCCeEEEEecCC----CEEEEEeCCCCEEEE
Q psy17902 283 AK-------------NRVISSGGTDKSVRVWKIQEES----QL-VFNGHSRGIDMTRRVND----QQFITCGEDGTLSLW 340 (454)
Q Consensus 283 ~~-------------~~~l~~~~~dg~i~i~d~~~~~----~~-~~~~~~~~i~~~~~~~~----~~l~~~~~dg~i~iw 340 (454)
|+ +++|++|+.|+.|++||++++. .. .+.+|...|.++.+.+. .+|++++.|++|++|
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 97 4799999999999999998764 22 67889999999988764 689999999999999
Q ss_pred ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
|+............. ...+...|.+++|+|++++||+++.||+|+||+....
T Consensus 235 d~~~~~~~~~~~~~~----~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLK----EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp EESSTTSCCEEEESS----SSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred EeCCCCCccceeeee----cccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCC
Confidence 997643211111110 0124566999999999999999999999999998643
No 48
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.7e-37 Score=295.11 Aligned_cols=285 Identities=20% Similarity=0.325 Sum_probs=249.8
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |.+.|.+++|+ +++|++|+.||.|++||+.++.....+. +|...|.+++|+ +.+|++|+.|
T Consensus 151 ~~~~~~~--h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~--~~~l~s~s~d 218 (445)
T 2ovr_B 151 CLRTLVG--HTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY------GHTSTVRCMHLH--EKRVVSGSRD 218 (445)
T ss_dssp EEEECCC--CSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEE--TTEEEEEETT
T ss_pred EEEEEcC--CCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC------CCCCcEEEEEec--CCEEEEEeCC
Confidence 5667788 99999999998 4799999999999999999988777665 688899999996 5689999999
Q ss_pred CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902 212 SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS 290 (454)
Q Consensus 212 g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 290 (454)
|.|++||+ ++..+..+.+|...|.+++| ++.+|++|+.||.|++||+.+++.+..+.+|...|.++.| ++.++++
T Consensus 219 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~ 294 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVS 294 (445)
T ss_dssp SEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEE
T ss_pred CEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEE
Confidence 99999999 67888899999999999999 6889999999999999999999999999999999999999 7899999
Q ss_pred eeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEE
Q psy17902 291 GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS 369 (454)
Q Consensus 291 ~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 369 (454)
++.|+.|++||++++..+ .+.+|...+.++.+ +++++++++.||.|++||+.++.++..+.... .|...|++
T Consensus 295 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~------~~~~~v~~ 367 (445)
T 2ovr_B 295 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWDIKTGQCLQTLQGPN------KHQSAVTC 367 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCCSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEECSTT------SCSSCEEE
T ss_pred EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE-eCCEEEEEeCCCeEEEEECCCCcEEEEEccCC------CCCCCEEE
Confidence 999999999999998877 67778887777665 56799999999999999999998888776432 24566999
Q ss_pred EEEecCCCEEEEecCCCcEEEEEcCCCceeeEec---cCCCceeeeEEEEcCCCCEEEEEecCCCc----eeeeeeeCCC
Q psy17902 370 VACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ---DIPLSGVINSLVFTSDHKHLVAGIGTEHR----FGRWKTIKGV 442 (454)
Q Consensus 370 ~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~---~~~~~~~v~~l~~s~d~~~l~~~~~~d~~----i~~W~~~~~~ 442 (454)
++|+ +++|++|+.||.|++||+.+++.+..+. ...+.+.|++++|+|++.+|+++ +.||. |.+|+.....
T Consensus 368 ~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~-~~dg~~~~~l~v~df~~~~ 444 (445)
T 2ovr_B 368 LQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVG-SRNGTEETKLLVLDFDVDM 444 (445)
T ss_dssp EEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEE-CSSSSSCCEEEEEECCCCC
T ss_pred EEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEc-ccCCCCccEEEEEECCCCC
Confidence 9995 5799999999999999999998887772 12478899999999999999988 78887 9999986543
No 49
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.8e-38 Score=337.42 Aligned_cols=289 Identities=16% Similarity=0.287 Sum_probs=253.8
Q ss_pred eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
.....+.+ |.+.|++++|+|++++|++|+.||.|++||+.++.....+. +|...|.+++|+|++++|++|+.
T Consensus 606 ~~~~~~~~--h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~~~ 677 (1249)
T 3sfz_A 606 LSRLVVRP--HTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIK------AHEDEVLCCAFSSDDSYIATCSA 677 (1249)
T ss_dssp CCSEEECC--CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEECTTSSEEEEEET
T ss_pred cceEEEec--ccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEec------cCCCCEEEEEEecCCCEEEEEeC
Confidence 34456777 99999999999999999999999999999999998877766 68899999999999999999999
Q ss_pred CCcEEEEeC-CCccEEeecccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902 211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV 287 (454)
Q Consensus 211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 287 (454)
||.|++||+ ++..+..+.+|...|.+++|+| ++.++++|+.||.|++||+.++.++..+.+|...|++++|+|++++
T Consensus 678 d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 678 DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDEL 757 (1249)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTE
T ss_pred CCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCE
Confidence 999999999 7888899999999999999999 5568999999999999999999999999999999999999999999
Q ss_pred EEEeeCCCcEEEeeccCCeEEEEcc--------------ccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902 288 ISSGGTDKSVRVWKIQEESQLVFNG--------------HSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIP 352 (454)
Q Consensus 288 l~~~~~dg~i~i~d~~~~~~~~~~~--------------~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 352 (454)
|++++.||.|++||+.++....... ....+.++.+.+ +..+++++ ++.+.+||+.++.....+.
T Consensus 758 l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~ 836 (1249)
T 3sfz_A 758 LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIH 836 (1249)
T ss_dssp EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEc
Confidence 9999999999999999887652211 112344555554 55555555 7899999999998887775
Q ss_pred cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR 432 (454)
Q Consensus 353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~ 432 (454)
.. |...|.+++|+|++.++++++.||.|++|++.++..+..+.. |.+.|++++|+|+|++|+++ +.|+.
T Consensus 837 ~~--------~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~~l~s~-s~dg~ 905 (1249)
T 3sfz_A 837 TG--------HHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRG--HLSWVHGVMFSPDGSSFLTA-SDDQT 905 (1249)
T ss_dssp CS--------SSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSC
T ss_pred CC--------CCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCC--CccceEEEEECCCCCEEEEE-eCCCe
Confidence 43 345599999999999999999999999999999988888876 88999999999999999998 89999
Q ss_pred eeeeeee
Q psy17902 433 FGRWKTI 439 (454)
Q Consensus 433 i~~W~~~ 439 (454)
|++|+..
T Consensus 906 v~vw~~~ 912 (1249)
T 3sfz_A 906 IRVWETK 912 (1249)
T ss_dssp EEEEEHH
T ss_pred EEEEEcc
Confidence 9999964
No 50
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.5e-38 Score=289.16 Aligned_cols=256 Identities=19% Similarity=0.254 Sum_probs=212.8
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |...|++++|+|++.+|++|+.||+|++||+.++.....+. +|...|.+++|+|++++|++|+.|
T Consensus 68 ~~~~l~~--h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~------~h~~~v~~v~~sp~~~~l~s~~~d 139 (343)
T 2xzm_R 68 PHKALTG--HNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFV------GHQSEVYSVAFSPDNRQILSAGAE 139 (343)
T ss_dssp EEEEECC--CSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEE------CCCSCEEEEEECSSTTEEEEEETT
T ss_pred ccchhcc--CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEc------CCCCcEEEEEECCCCCEEEEEcCC
Confidence 4567888 99999999999999999999999999999999988776654 688899999999999999999999
Q ss_pred CcEEEEeCCCccEEeec---ccCCCeEEEEEcCCC----------CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeE
Q psy17902 212 SNIKLWSSSLEHLHTFT---GHKAPITGLAISFEC----------DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITS 278 (454)
Q Consensus 212 g~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~----------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 278 (454)
+.|++||+.+....... .|...|.+++|+|++ .+|++++.||.|++||. .......+.+|...|++
T Consensus 140 ~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 140 REIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNH 218 (343)
T ss_dssp SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEE
T ss_pred CEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceE
Confidence 99999999655554443 789999999999986 78999999999999994 46667788899999999
Q ss_pred EEeecCCCEEEEeeCCCcEEEeeccCCe-EEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce--eeeccc
Q psy17902 279 LDILAKNRVISSGGTDKSVRVWKIQEES-QLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH--TIPVAH 355 (454)
Q Consensus 279 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~ 355 (454)
++|+|++++|++|+.||.|++||+.... ......+...+.++.+.++..+++++.|+.|++|++.++.... .+....
T Consensus 219 ~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~ 298 (343)
T 2xzm_R 219 LSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEP 298 (343)
T ss_dssp EEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCS
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCc
Confidence 9999999999999999999999995433 3333345566888888877777778889999999998776554 222110
Q ss_pred --CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 356 --GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 356 --~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
.......|...|.+++|+|+|++|++|+.||+|++|++.++
T Consensus 299 ~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 299 ITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp GGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred chhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 01111245667999999999999999999999999998654
No 51
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.5e-38 Score=291.87 Aligned_cols=307 Identities=12% Similarity=0.180 Sum_probs=239.3
Q ss_pred CceeEeEeccCCCCCCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCC-Ccee-cccCCcccCCCCCCceEEEEEeCCCc
Q psy17902 129 ATVVCTKFNGKPHRASITCIAVTSD---SKHVYSACKDGIIIKWLLET-RSKV-CSSPFVKTDRKSYPPILALAVANNNE 203 (454)
Q Consensus 129 ~~~~~~~~~~~~h~~~V~~~~~s~~---~~~l~~~~~dg~i~iwd~~~-~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~ 203 (454)
+......+.+ |.+.|++++|+|+ |++|++|+.||.|++||+.+ +... ..+. +|...|.+++|+|+++
T Consensus 28 ~~~~~~~~~~--h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 28 PMKDIEVTSS--PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQ------MHTGPVLDVCWSDDGS 99 (368)
T ss_dssp TTCCEECSSC--CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEE------ECSSCEEEEEECTTSS
T ss_pred CcceeEeccC--CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEec------cccCCEEEEEECcCCC
Confidence 3446677888 9999999999999 69999999999999999987 4333 2222 5888999999999999
Q ss_pred EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEE--cCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEe
Q psy17902 204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAI--SFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI 281 (454)
Q Consensus 204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 281 (454)
+|++++.||.|++||+.......+..|...|.+++| ++++.+|++++.||.|++||+.+++.+..+..+. .+.++.+
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~ 178 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADV 178 (368)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEE
T ss_pred EEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEe
Confidence 999999999999999966666667889999999999 8899999999999999999999999888887654 5666666
Q ss_pred ecCCCEEEEeeCCCcEEEeeccCCeEEEE---ccccCCeEEEEec-CC----CEEEEEeCCCCEEEEecCCC---cccee
Q psy17902 282 LAKNRVISSGGTDKSVRVWKIQEESQLVF---NGHSRGIDMTRRV-ND----QQFITCGEDGTLSLWSILKK---VPTHT 350 (454)
Q Consensus 282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~i~~~~~~-~~----~~l~~~~~dg~i~iwd~~~~---~~~~~ 350 (454)
. ...+++++.++.+.+|+++....... ..+.....++.+. .. ..+++++.||.|++|++... .....
T Consensus 179 ~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 179 I--YPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp E--TTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred c--CCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 5 45788889999999999987655421 1122333333322 22 23999999999999999887 44555
Q ss_pred eecccCCC---CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902 351 IPVAHGYD---SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI 427 (454)
Q Consensus 351 ~~~~~~~~---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 427 (454)
+..+.... ....|...|++++|+|++++|++|+.||.|++||+.+++.+..+.. |..+|++++|+|+|++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~~~- 333 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ--LDQPISACCFNHNGNIFAYA- 333 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC--CSSCEEEEEECTTSSCEEEE-
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC--CCCCceEEEECCCCCeEEEE-
Confidence 54332210 0111223599999999999999999999999999999998888876 78899999999999999999
Q ss_pred cCCCceeeeeeeC-CCeeEEEEE
Q psy17902 428 GTEHRFGRWKTIK-GVKNTVAII 449 (454)
Q Consensus 428 ~~d~~i~~W~~~~-~~~~~~~~~ 449 (454)
+.|+....|+... .....+.+.
T Consensus 334 s~d~~~~~~~~~~~~~~~~i~~~ 356 (368)
T 3mmy_A 334 SSYDWSKGHEFYNPQKKNYIFLR 356 (368)
T ss_dssp ECCCSTTCGGGCCTTSCCEEEEE
T ss_pred ecccccccccccCCCccceeeeh
Confidence 5666655555432 223444443
No 52
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-38 Score=287.57 Aligned_cols=247 Identities=19% Similarity=0.297 Sum_probs=195.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee-cccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV-CSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS 219 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~ 219 (454)
|...|.+++|+|++++|++|+.|+.|+||++...... ..........+|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 9999999999999999999999999999998642210 000111122368899999999999999999999999999998
Q ss_pred -CC----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc--eeEEEeeccCCceeEEEeecC--CCEEEE
Q psy17902 220 -SL----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR--AYVETLFGHQSAITSLDILAK--NRVISS 290 (454)
Q Consensus 220 -~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~ 290 (454)
.. ..+..+.+|...|.+++|+|++.+|++|+.|++|++||+.++ .++..+.+|...|.+++|+|+ +.+|++
T Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s 216 (330)
T 2hes_X 137 DESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCS 216 (330)
T ss_dssp CTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEE
T ss_pred cCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEE
Confidence 32 346678899999999999999999999999999999998766 677888999999999999998 678999
Q ss_pred eeCCCcEEEeeccCC--------eEE-EEcc-ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcc--ceeeecccCCC
Q psy17902 291 GGTDKSVRVWKIQEE--------SQL-VFNG-HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVP--THTIPVAHGYD 358 (454)
Q Consensus 291 ~~~dg~i~i~d~~~~--------~~~-~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~ 358 (454)
|+.|++|++||+..+ ... .+.. |...+.++.+.++..|++++.||.|++|+..++.. ......
T Consensus 217 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~----- 291 (330)
T 2hes_X 217 GSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRAL----- 291 (330)
T ss_dssp EETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESC-----
T ss_pred EeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEecccc-----
Confidence 999999999999764 222 3333 78889999998888999999999999999876632 222211
Q ss_pred CCCCCCC-cEEEEEEec--CCCEEEEecCCCcEEEEEcCC
Q psy17902 359 SSSSEPN-WITSVACLH--NSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 359 ~~~~~~~-~i~~~~~s~--~~~~l~~~~~dg~v~iwd~~~ 395 (454)
.|.. .|.+++|+| ++++|++|+.||+|+||++..
T Consensus 292 ---~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 292 ---CHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ---TTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred ---ccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 1333 599999999 688999999999999999864
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.3e-38 Score=291.29 Aligned_cols=281 Identities=17% Similarity=0.264 Sum_probs=237.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
|.+.|.+++|+|+|++++++..++.+.+|............ .|...|.+++|+|++++|++++ ||.|++|++.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~ 80 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL------NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS 80 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEE------CCSSCCCEEEECSSSSEEEEEC-BSEEEEEETT
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceec------cCCCceEEEEEecCCcEEEEcC-CCeEEEEECC
Confidence 66789999999999999998888777666544332222211 5888999999999999999999 9999999993
Q ss_pred -Cc---cEEeec--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEeecCCCEEEEee
Q psy17902 221 -LE---HLHTFT--GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDILAKNRVISSGG 292 (454)
Q Consensus 221 -~~---~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 292 (454)
.. .+..+. .|...|.+++|+|++++|++++.||.|++||+.+++ ....+..|...|.+++|+|++++|++++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 160 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC 160 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe
Confidence 22 223333 799999999999999999999999999999999887 5667788999999999999999999999
Q ss_pred CCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902 293 TDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV 370 (454)
Q Consensus 293 ~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 370 (454)
.||.|++||++++... .+..|...+.++.+. ++.+|++++.||.|++||+.++..+..+.. ...+.++
T Consensus 161 ~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~----------~~~v~~~ 230 (337)
T 1gxr_A 161 SDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF----------TSQIFSL 230 (337)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC----------SSCEEEE
T ss_pred CCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC----------CCceEEE
Confidence 9999999999998877 677788888887776 567899999999999999999888777642 3449999
Q ss_pred EEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+|+|++++|++++.+|.|++|++.++.... +. .|...|.+++|+|++++|+++ +.|+.|++|+...+.
T Consensus 231 ~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LH--LHESCVLSLKFAYCGKWFVST-GKDNLLNAWRTPYGA 298 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSSCEEE-EC--CCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCCeEE-Ec--CCccceeEEEECCCCCEEEEe-cCCCcEEEEECCCCe
Confidence 999999999999999999999999876543 33 378899999999999999988 789999999987654
No 54
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=280.41 Aligned_cols=275 Identities=17% Similarity=0.279 Sum_probs=230.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCcc
Q psy17902 145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEH 223 (454)
Q Consensus 145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~ 223 (454)
+++|+||+++ +||+|. |++|+|||+.+++....+.. ..|...|.+++|+|++++|++|+.||.|++|++ +++.
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~----~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~ 101 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQM----EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKR 101 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEEC----CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEe----cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCcee
Confidence 5789999875 777764 89999999999887765432 257788999999999999999999999999999 7788
Q ss_pred EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI 302 (454)
Q Consensus 224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 302 (454)
+..+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+.+|...+.++.+++++++|++++.|+.|++||+
T Consensus 102 ~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 102 LRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred EEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 8899999998887665 4679999999999999998876 445677899999999999999999999999999999999
Q ss_pred cCCeEE-----EEccccCCeEEEEecC-C-CEE--EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902 303 QEESQL-----VFNGHSRGIDMTRRVN-D-QQF--ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL 373 (454)
Q Consensus 303 ~~~~~~-----~~~~~~~~i~~~~~~~-~-~~l--~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 373 (454)
++++.. ....+...+..+.+.+ + ..+ ++++.++.|++||............ ...+..+.|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~----------~~~v~~~~~~ 249 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA----------HSQVCSILWS 249 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC----------SSCEEEEEEE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc----------eeeeeeeeec
Confidence 875432 5556667777666654 2 333 3566889999999988877665542 3339999999
Q ss_pred cCCCEEEEe--cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 374 HNSDLVASG--SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 374 ~~~~~l~~~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
|++..++++ +.||.|++||+.+++++..+.+ |.+.|++++|+|||++|+++ |.|+.|++|+...
T Consensus 250 ~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g--H~~~V~~l~~spdg~~l~S~-s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 250 PHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--HTSRVLSLTMSPDGATVASA-AADETLRLWRCFE 315 (318)
T ss_dssp TTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSCEEEE-ETTTEEEEECCSC
T ss_pred ccccceEEEEEcCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEEE-ecCCeEEEEECCC
Confidence 999977664 4799999999999999999987 88999999999999999998 8999999999754
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.4e-37 Score=295.77 Aligned_cols=281 Identities=16% Similarity=0.280 Sum_probs=242.9
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe--CCCcEEEEec
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA--NNNELVASGD 209 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~ 209 (454)
....+.+ |.+.|++++|+|++ +|++|+.||.|++||+.++.....+. +|...|.+++|+ +++.+|++|+
T Consensus 154 ~~~~~~~--h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~------~h~~~v~~l~~~~~~~~~~l~s~s 224 (464)
T 3v7d_B 154 FLLQLSG--HDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFE------GHNSTVRCLDIVEYKNIKYIVTGS 224 (464)
T ss_dssp EEEEECC--CSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEEESSSCEEEEEEE
T ss_pred EEEEEeC--CCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEEC------CCCCccEEEEEecCCCCCEEEEEc
Confidence 5667788 99999999999987 99999999999999999988777665 688999999998 5789999999
Q ss_pred CCCcEEEEeCCCc------------------------cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee
Q psy17902 210 NNSNIKLWSSSLE------------------------HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY 265 (454)
Q Consensus 210 ~dg~v~vw~~~~~------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 265 (454)
.||.|++||+... .+..+.+|...|.++ ++++++|++|+.||.|++||+.+++.
T Consensus 225 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~ 302 (464)
T 3v7d_B 225 RDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKC 302 (464)
T ss_dssp TTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEE
T ss_pred CCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999998332 155677899998877 56789999999999999999999999
Q ss_pred EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK 344 (454)
Q Consensus 266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~ 344 (454)
+..+.+|...|.+++|+|++++|++|+.||.|++||++++..+ .+.+|...+.++.+. +.+|++++.||.|++||+.+
T Consensus 303 ~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-~~~l~s~s~dg~v~vwd~~~ 381 (464)
T 3v7d_B 303 LYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-DKFLVSAAADGSIRGWDAND 381 (464)
T ss_dssp EEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-SSEEEEEETTSEEEEEETTT
T ss_pred EEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc-CCEEEEEeCCCcEEEEECCC
Confidence 9999999999999999999999999999999999999998887 778899999888876 68999999999999999998
Q ss_pred CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEE
Q psy17902 345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV 424 (454)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~ 424 (454)
......... ...+..++|+|++.+|++|+ ||.|++||+.+++.+..+.. .+.+.|.+++|+ +..++
T Consensus 382 ~~~~~~~~~----------~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~-~~~~~v~~v~~~--~~~l~ 447 (464)
T 3v7d_B 382 YSRKFSYHH----------TNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANIL-KDADQIWSVNFK--GKTLV 447 (464)
T ss_dssp CCEEEEEEC----------TTCCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTT-TTCSEEEEEEEE--TTEEE
T ss_pred CceeeeecC----------CCCccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhc-cCCCcEEEEEec--CCEEE
Confidence 776655532 23377889999999999998 89999999999988875332 378899999997 66777
Q ss_pred EEecCCCceeeeee
Q psy17902 425 AGIGTEHRFGRWKT 438 (454)
Q Consensus 425 ~~~~~d~~i~~W~~ 438 (454)
++++.++.+.+|-.
T Consensus 448 ~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 448 AAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEEEeCCeEEEEEe
Confidence 77677877766643
No 56
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.2e-38 Score=282.49 Aligned_cols=247 Identities=17% Similarity=0.322 Sum_probs=206.1
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---CccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCC
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSS---LEHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIED 262 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~ 262 (454)
+|...|.+++|+|+|++||+|+.|+.|+||++. ...+..+.+|.++|++++|+++ +++|++|+.|++|++||+.+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 688999999999999999999999999999983 3567889999999999999863 89999999999999999987
Q ss_pred ce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCe---EEEEccccCCeEEEEecCC----------
Q psy17902 263 RA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEES---QLVFNGHSRGIDMTRRVND---------- 325 (454)
Q Consensus 263 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~i~~~~~~~~---------- 325 (454)
+. .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||++... ...+.+|...+.++.+.+.
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCC
Confidence 74 45667789999999999997 7899999999999999998753 3467788888988887753
Q ss_pred ----CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCC---CEEEEecCCCcEEEEEcCCCc-
Q psy17902 326 ----QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNS---DLVASGSYDGCVKLWKITPKR- 397 (454)
Q Consensus 326 ----~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~- 397 (454)
.+|++|+.|+.|++||+.++......... ...|..+|.+++|+|++ .+|++|+.|++|+|||+....
T Consensus 167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~-----l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~ 241 (297)
T 2pm7_B 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-----LEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG 241 (297)
T ss_dssp ---CCEEEEEETTSCEEEEEEETTTTEEEEEEE-----ECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE-----ecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC
Confidence 58999999999999999876532211100 01356679999999985 799999999999999998753
Q ss_pred --eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 398 --TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 398 --~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
....+....+...|.+++|+|+|++|+++ +.|+.|++|+...
T Consensus 242 ~~~~~~~~~~~~~~~v~~~~~s~~g~~las~-~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENL 285 (297)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEE-ETTSCEEEEEECT
T ss_pred ccceeeeecccCCCcEEEEEECCCCCEEEEE-cCCCcEEEEEECC
Confidence 12233223467889999999999999998 8899999999764
No 57
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.2e-39 Score=296.11 Aligned_cols=289 Identities=12% Similarity=0.054 Sum_probs=216.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC-------eEEEEEcCCCceecccCC----cccCCCCCCceEEEEEeCCCcEEEEe--
Q psy17902 142 RASITCIAVTSDSKHVYSACKDG-------IIIKWLLETRSKVCSSPF----VKTDRKSYPPILALAVANNNELVASG-- 208 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg-------~i~iwd~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~-- 208 (454)
.-+|+|++|+|++++|++|+.+. .|++|++........... ......+...|.+++++ +..+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 35799999999999999997543 599999876543221110 01123566778887765 4456655
Q ss_pred ---------cCCCcEEEEeC-CCc-cEEe--------ecccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEE
Q psy17902 209 ---------DNNSNIKLWSS-SLE-HLHT--------FTGHKAPITGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVE 267 (454)
Q Consensus 209 ---------~~dg~v~vw~~-~~~-~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~ 267 (454)
+.|+.+++|++ ... .+.. ...+...+.+++|+|||++|++++ .|++|+|||+.+++.+.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 45778999997 222 2211 123455689999999999987654 68999999999999988
Q ss_pred EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEec-CCCEEEEEeCCC----CEEE
Q psy17902 268 TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRV-NDQQFITCGEDG----TLSL 339 (454)
Q Consensus 268 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~-~~~~l~~~~~dg----~i~i 339 (454)
.+. |...|.+++|+|++++|++++.+ .+.+|+..++... ....|...+..+.+. ++..+++++.++ .+++
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 875 78889999999999999998855 5666666666554 334566677766654 567888888776 5888
Q ss_pred EecCCCccceeee-cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe-ccCCCceeeeEEEEc
Q psy17902 340 WSILKKVPTHTIP-VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL-QDIPLSGVINSLVFT 417 (454)
Q Consensus 340 wd~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~v~~l~~s 417 (454)
|++.......... ... .|...|++++|+|+|++||+|+.|++|+|||+.+++++..+ .. |.++|++|+||
T Consensus 250 ~~~~~~~~~~~~~~~~~------~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~g--H~~~V~~v~fS 321 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVT------NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQA--HSFAITEVTIS 321 (365)
T ss_dssp EEEETTEEEEEEEEEEE------SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTS--SSSCEEEEEEC
T ss_pred cccccceecceeeeeec------CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCc--ccCCEEEEEEC
Confidence 9887654322111 111 24556999999999999999999999999999999888775 44 89999999999
Q ss_pred CCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 418 SDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 418 ~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
|||++||++ +.|++|++|++.....
T Consensus 322 pdg~~laS~-S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 322 PDSTYVASV-SAANTIHIIKLPLNYA 346 (365)
T ss_dssp TTSCEEEEE-ETTSEEEEEECCTTTT
T ss_pred CCCCEEEEE-eCCCeEEEEEcCCCCc
Confidence 999999999 8999999999865543
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=292.59 Aligned_cols=301 Identities=12% Similarity=0.204 Sum_probs=240.5
Q ss_pred EeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCc-------ccCCCCCCceEEEEEeC-CCc
Q psy17902 133 CTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFV-------KTDRKSYPPILALAVAN-NNE 203 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~-~~~ 203 (454)
...+.+ |.+.|++++|+| ++++|++|+.||.|++||+.++......... ....+|...|.+++|+| ++.
T Consensus 36 ~~~~~~--h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 113 (408)
T 4a11_B 36 RDVERI--HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG 113 (408)
T ss_dssp EEECCC--CSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT
T ss_pred eeeeec--cCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc
Confidence 456677 999999999999 9999999999999999999987655443210 01124888999999999 788
Q ss_pred EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902 204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD 280 (454)
Q Consensus 204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 280 (454)
+|++++.||.|++||+..........+...+.++.|++. +.++++++.+|.|++||+.++..+..+.+|...|++++
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 114 MFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp CEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 999999999999999954444444448889999999985 45999999999999999999999999999999999999
Q ss_pred eecCCC-EEEEeeCCCcEEEeeccCCeEE--EE---------------ccccCCeEEEEec-CCCEEEEEeCCCCEEEEe
Q psy17902 281 ILAKNR-VISSGGTDKSVRVWKIQEESQL--VF---------------NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWS 341 (454)
Q Consensus 281 ~~~~~~-~l~~~~~dg~i~i~d~~~~~~~--~~---------------~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd 341 (454)
|+|++. +|++++.||.|++||++..... .+ ..|...+.++.+. ++.+|++++.||.|++||
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd 273 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWN 273 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEE
Confidence 999998 5899999999999999876522 22 4677778777766 567899999999999999
Q ss_pred cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902 342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK 421 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 421 (454)
+.++............. ....+........+..+++++.++.|++||+.++..+..+.. |.+.|++++|+|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~v~~~~~s~~~~ 347 (408)
T 4a11_B 274 SSNGENTLVNYGKVCNN----SKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKG--HYKTVDCCVFQSNFQ 347 (408)
T ss_dssp TTTCCBCCCCCCCCCCC----CSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECC--CSSCEEEEEEETTTT
T ss_pred CCCCccceecccccccc----ccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeecc--CCCeEEEEEEcCCCC
Confidence 99887655443221111 111122222233445677778899999999999999988886 889999999999999
Q ss_pred EEEEEecCCCceeeeeeeCCC
Q psy17902 422 HLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 422 ~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+|+++ +.||.|++|+.....
T Consensus 348 ~l~s~-~~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 348 ELYSG-SRDCNILAWVPSLYE 367 (408)
T ss_dssp EEEEE-ETTSCEEEEEECC--
T ss_pred EEEEE-CCCCeEEEEeCCCCC
Confidence 99988 899999999987653
No 59
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.5e-38 Score=292.73 Aligned_cols=248 Identities=16% Similarity=0.217 Sum_probs=203.8
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN 213 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 213 (454)
....+ |...|++++|+|++. +++++.||+|+|||+.+++....... ...+|...|.+++|+|++++|++|+.||.
T Consensus 88 ~~~~~--~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~--~~~~h~~~V~~v~~spdg~~l~sgs~dg~ 162 (357)
T 4g56_B 88 TAGVQ--TEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLVNKF--AKYEHDDIVKTLSVFSDGTQAVSGGKDFS 162 (357)
T ss_dssp SEEEE--CSSCEEEEEEETTTE-EEEEETTSCEEEC--------CCCCE--EECCCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred cccCC--CCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEEEee--ccCCCCCCEEEEEECCCCCEEEEEeCCCe
Confidence 33445 999999999999975 55678899999999988765443322 12358889999999999999999999999
Q ss_pred EEEEeC-CCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEe--eccCCceeEEEeecCC-CEE
Q psy17902 214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETL--FGHQSAITSLDILAKN-RVI 288 (454)
Q Consensus 214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~-~~l 288 (454)
|++||+ ++..+..+..|...|++++|++++. ++++++.||.|++||+++++.+..+ ..|...+++++|+|++ .+|
T Consensus 163 v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~l 242 (357)
T 4g56_B 163 VKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTF 242 (357)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceE
Confidence 999999 7778889999999999999999874 7899999999999999998876554 3567789999999985 688
Q ss_pred EEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-C-CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902 289 SSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-D-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN 365 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 365 (454)
++|+.|+.|++||+++++.. .+.+|...+.++.+.+ + .+|++++.|++|+|||+.+++.+..+ .|..
T Consensus 243 a~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~----------~H~~ 312 (357)
T 4g56_B 243 ACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL----------SHRD 312 (357)
T ss_dssp EEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC----------CCSS
T ss_pred EEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC----------CCCC
Confidence 99999999999999988766 7888999999888764 3 47889999999999999988776554 2566
Q ss_pred cEEEEEEec-CCCEEEEecCCCcEEEEEcCCC
Q psy17902 366 WITSVACLH-NSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 366 ~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
.|++++|+| ++.+|++|+.||+|++|++.+.
T Consensus 313 ~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 313 FVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 699999998 7899999999999999999754
No 60
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.3e-37 Score=295.96 Aligned_cols=282 Identities=20% Similarity=0.357 Sum_probs=243.5
Q ss_pred eEeEeccCCCCCCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 132 VCTKFNGKPHRASI-TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 132 ~~~~~~~~~h~~~V-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
....+.+ |...| .|+.+ ++++|++|+.||.|++||+.+++....+. +|...|.+++|++++ +|++|+.
T Consensus 113 ~~~~l~~--h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~------~h~~~V~~l~~~~~~-~l~s~s~ 181 (464)
T 3v7d_B 113 QRTTLRG--HMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLS------GHDGGVWALKYAHGG-ILVSGST 181 (464)
T ss_dssp EEEEEEC--CSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECSTT-EEEEEET
T ss_pred ceEEEcC--CCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEe------CCCcCEEEEEEcCCC-EEEEEeC
Confidence 5667888 99885 66666 45899999999999999999988877766 699999999999988 8999999
Q ss_pred CCcEEEEeC-CCccEEeecccCCCeEEEEEc--CCCCEEEEEeCCCcEEEEeCCCcee----------------------
Q psy17902 211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAIS--FECDTLYSSSNDRSIKVWNIEDRAY---------------------- 265 (454)
Q Consensus 211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~---------------------- 265 (454)
||.|++||+ ++..+..+.+|...|.+++|+ +++.+|++|+.||.|++||+.++..
T Consensus 182 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPY 261 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTT
T ss_pred CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeE
Confidence 999999999 777888999999999999998 5778999999999999999987652
Q ss_pred -EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEec
Q psy17902 266 -VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSI 342 (454)
Q Consensus 266 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~ 342 (454)
+..+.+|...|.++ ++++++|++++.||.|++||++++..+ .+.+|...+.++.+. ++..+++++.||.|++||+
T Consensus 262 ~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~ 339 (464)
T 3v7d_B 262 FVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDL 339 (464)
T ss_dssp EEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred EEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 45667888888877 567899999999999999999998877 777888889877776 5679999999999999999
Q ss_pred CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH 422 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~ 422 (454)
.++.++..+.. |...|.++.|+ +.+|++|+.||.|++||+.++....... +...+..++|+|++.+
T Consensus 340 ~~~~~~~~~~~---------h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 340 ENGELMYTLQG---------HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH---HTNLSAITTFYVSDNI 405 (464)
T ss_dssp TTTEEEEEECC---------CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE---CTTCCCEEEEEECSSE
T ss_pred CCCcEEEEEeC---------CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec---CCCCccEEEEEeCCCE
Confidence 99988887753 45559999997 5799999999999999999887665554 5667888999999999
Q ss_pred EEEEecCCCceeeeeeeCCC
Q psy17902 423 LVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 423 l~~~~~~d~~i~~W~~~~~~ 442 (454)
|+++ + |+.|++|+..++.
T Consensus 406 l~~~-~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 406 LVSG-S-ENQFNIYNLRSGK 423 (464)
T ss_dssp EEEE-E-TTEEEEEETTTCC
T ss_pred EEEe-c-CCeEEEEECCCCc
Confidence 9988 4 8999999987654
No 61
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=302.02 Aligned_cols=294 Identities=14% Similarity=0.206 Sum_probs=223.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceec-----ccCCcccCCCCC------------CceEEEEEeCCC-
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVC-----SSPFVKTDRKSY------------PPILALAVANNN- 202 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~------------~~v~~~~~~~~~- 202 (454)
|.+.|++++|+|++++||+|+.||.|+||++.++.... .+.......+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 78899999999999999999999999999998765200 000111112566 789999999998
Q ss_pred -cEEEEecCCCcEEEEeCCCccE----------------------------------------Ee-ecccCCCeEEEEEc
Q psy17902 203 -ELVASGDNNSNIKLWSSSLEHL----------------------------------------HT-FTGHKAPITGLAIS 240 (454)
Q Consensus 203 -~~l~~~~~dg~v~vw~~~~~~~----------------------------------------~~-~~~~~~~v~~~~~~ 240 (454)
.+|++++.||.|++|++..... .. ..+|...|.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 7999999999999999832111 12 36799999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCC-ceeEE-------EeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeE----
Q psy17902 241 FECDTLYSSSNDRSIKVWNIED-RAYVE-------TLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQ---- 307 (454)
Q Consensus 241 ~~~~~l~~~~~dg~i~iwd~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~---- 307 (454)
|++++|++| .|+.|++||+.+ +..+. .+.+|...|++++|+|++ ++|++|+.||.|++||++++..
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRH 265 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccce
Confidence 999999998 799999999994 44443 255899999999999998 9999999999999999998875
Q ss_pred -EEEccccC------------CeEEEEec-CCCEEEEEeCCCCEEEEecCC-CccceeeecccCCCCC------CCCCCc
Q psy17902 308 -LVFNGHSR------------GIDMTRRV-NDQQFITCGEDGTLSLWSILK-KVPTHTIPVAHGYDSS------SSEPNW 366 (454)
Q Consensus 308 -~~~~~~~~------------~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~------~~~~~~ 366 (454)
..+..|.. .+.++.+. ++.+|++++. +.|++||+.+ +.++..+..+...... ......
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 46666664 78777766 4667888888 9999999997 7777777654321100 000001
Q ss_pred EEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec------------------------------cCCCceeeeEEEE
Q psy17902 367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ------------------------------DIPLSGVINSLVF 416 (454)
Q Consensus 367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~------------------------------~~~~~~~v~~l~~ 416 (454)
+..++|+|++.+|++|+.||.|++||+.+++.+.... .......|..++|
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 424 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAW 424 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEE
Confidence 3359999999999999999999999999886653211 1124567899999
Q ss_pred cCCCCEEEEEecCCCceeeeee
Q psy17902 417 TSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 417 s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
+|++.+|+++ +.+ .+++|..
T Consensus 425 ~p~~~~la~~-~~~-~~~~~~~ 444 (447)
T 3dw8_B 425 HPKENIIAVA-TTN-NLYIFQD 444 (447)
T ss_dssp CSSSSEEEEE-CSS-CEEEEEC
T ss_pred CCCCCEEEEE-ecc-eeeeecc
Confidence 9999999988 444 4777753
No 62
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-37 Score=286.74 Aligned_cols=245 Identities=16% Similarity=0.260 Sum_probs=217.6
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc---
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR--- 263 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--- 263 (454)
+|...|++++|+|++.+|++|+.||.|+|||. .+.....+..|...|.+++|+|++.+|++|+.|+.+++|++...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence 68899999999999999999999999999998 77778888889999999999999999999999999999998643
Q ss_pred ---eeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC---CCEEEEEeCCCC
Q psy17902 264 ---AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN---DQQFITCGEDGT 336 (454)
Q Consensus 264 ---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~---~~~l~~~~~dg~ 336 (454)
.....+.+|...|.+++|+|++..|++++.|++|++||+.+++.+ .+.+|...+.++.+.+ +.+|++|+.||.
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 234566789999999999999999999999999999999998877 7788999998877653 579999999999
Q ss_pred EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF 416 (454)
Q Consensus 337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 416 (454)
|++||++++.++..+.. |...|++++|+|++.+|++|+.|++|++||+..+..+..+....+...+++++|
T Consensus 222 v~~wd~~~~~~~~~~~~---------h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFET---------HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTTCCEEEEECC---------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEECCCCcEEEEecC---------CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 99999999988877653 455699999999999999999999999999998877776665444567899999
Q ss_pred cCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 417 TSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 417 s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+|+|.+|+++ +.|+.|++|+...+.
T Consensus 293 s~~g~~l~~g-~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 293 SLSGRLLFAG-YNDYTINVWDVLKGS 317 (354)
T ss_dssp CTTSSEEEEE-ETTSCEEEEETTTCS
T ss_pred eCCCCEEEEE-ECCCcEEEEECCCCc
Confidence 9999999998 899999999986654
No 63
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=6.2e-38 Score=297.19 Aligned_cols=272 Identities=23% Similarity=0.455 Sum_probs=236.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS- 219 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~- 219 (454)
|...|+|++| ++++|++|+.||.|++||+.++.....+. +|...|.+++| ++++|++|+.||.|++||+
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~------~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILT------GHTGSVLCLQY--DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEEC------CCSSCEEEEEC--CSSEEEEEETTSCEEEEESS
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEc------CCCCcEEEEEE--CCCEEEEEcCCCeEEEEECC
Confidence 7788999987 78999999999999999999988777665 68889999998 7889999999999999999
Q ss_pred CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE---EEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902 220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV---ETLFGHQSAITSLDILAKNRVISSGGTDKS 296 (454)
Q Consensus 220 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 296 (454)
++..+..+..|...|.+++|+ +.+|++|+.||.|++||+.++..+ ..+.+|...|.+++| ++++|++|+.||.
T Consensus 202 ~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~ 277 (435)
T 1p22_A 202 TGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRT 277 (435)
T ss_dssp SCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred CCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCe
Confidence 778888999999999999997 459999999999999999887655 567789999999999 6889999999999
Q ss_pred EEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902 297 VRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375 (454)
Q Consensus 297 i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 375 (454)
|++||++++..+ .+.+|...+.++.+ ++.++++|+.||.|++||+.++.++..+.. |...|.+++| +
T Consensus 278 i~vwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~---------h~~~v~~~~~--~ 345 (435)
T 1p22_A 278 IKVWNTSTCEFVRTLNGHKRGIACLQY-RDRLVVSGSSDNTIRLWDIECGACLRVLEG---------HEELVRCIRF--D 345 (435)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTCCEEEEECC---------CSSCEEEEEC--C
T ss_pred EEEEECCcCcEEEEEcCCCCcEEEEEe-CCCEEEEEeCCCeEEEEECCCCCEEEEEeC---------CcCcEEEEEe--c
Confidence 999999998877 77788888988877 578999999999999999999988887753 4455999999 7
Q ss_pred CCEEEEecCCCcEEEEEcCCCc---------eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 376 SDLVASGSYDGCVKLWKITPKR---------TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 376 ~~~l~~~~~dg~v~iwd~~~~~---------~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
+.+|++|+.||.|++||+.++. .+..+.. |.+.|++++| ++.+|+++ +.||.|++|+......
T Consensus 346 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~--~~~~l~s~-s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 346 NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE--HSGRVFRLQF--DEFQIVSS-SHDDTILIWDFLNDPA 417 (435)
T ss_dssp SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECC--CSSCCCCEEE--CSSCEEEC-CSSSEEEEEC------
T ss_pred CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccC--CCCCeEEEEe--CCCEEEEE-eCCCEEEEEECCCCCC
Confidence 8899999999999999997665 5666665 8899999999 67888887 8999999999876543
No 64
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-36 Score=289.39 Aligned_cols=281 Identities=20% Similarity=0.413 Sum_probs=245.2
Q ss_pred eEeEeccCCCCCCe-EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 132 VCTKFNGKPHRASI-TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 132 ~~~~~~~~~h~~~V-~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
....+.+ |.+.| +|+. +++++|++|+.||.|++||+.++.....+. +|...|.+++|+ +.+|++|+.
T Consensus 110 ~~~~l~~--h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~~~~~--~~~l~s~~~ 177 (445)
T 2ovr_B 110 SPKVLKG--HDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLV------GHTGGVWSSQMR--DNIIISGST 177 (445)
T ss_dssp CCEEEEC--STTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECC------CCSSCEEEEEEE--TTEEEEEET
T ss_pred eeEEecc--cCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEc------CCCCCEEEEEec--CCEEEEEeC
Confidence 3456788 99875 5544 568999999999999999999988877765 688999999998 569999999
Q ss_pred CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902 211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289 (454)
Q Consensus 211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 289 (454)
||.|++||+ ++..+..+.+|...|.++.|+ ++.|++|+.||.|++||+.+++.+..+.+|...|.++.| ++++|+
T Consensus 178 dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~ 253 (445)
T 2ovr_B 178 DRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVV 253 (445)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEE
T ss_pred CCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEE
Confidence 999999999 778888999999999999996 568999999999999999999999999999999999999 688999
Q ss_pred EeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEE
Q psy17902 290 SGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT 368 (454)
Q Consensus 290 ~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~ 368 (454)
+|+.||.|++||++++..+ .+.+|...+.++.+ ++.++++++.||.|++||+.++..+..+.. |...+.
T Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---------~~~~v~ 323 (445)
T 2ovr_B 254 SGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF-DGIHVVSGSLDTSIRVWDVETGNCIHTLTG---------HQSLTS 323 (445)
T ss_dssp EEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE-CSSEEEEEETTSCEEEEETTTCCEEEEECC---------CCSCEE
T ss_pred EEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE-CCCEEEEEeCCCeEEEEECCCCCEEEEEcC---------CcccEE
Confidence 9999999999999998877 67788889988888 788999999999999999999988877753 344488
Q ss_pred EEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC-CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
++.+ ++++|++|+.||.|++||+.+++.+..+... .|...|++++|+ +.+|+++ +.||.|++|+...+..
T Consensus 324 ~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~-~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 324 GMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITS-SDDGTVKLWDLKTGEF 394 (445)
T ss_dssp EEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEE-ETTSEEEEEETTTCCE
T ss_pred EEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEE-eCCCeEEEEECCCCce
Confidence 7777 4669999999999999999999888887653 277889999996 5788888 8999999999876643
No 65
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=286.81 Aligned_cols=254 Identities=21% Similarity=0.278 Sum_probs=204.3
Q ss_pred eccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--ecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902 136 FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK--VCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN 213 (454)
Q Consensus 136 ~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 213 (454)
..+ |...|.+++|+|++++|++|+.|+.|++|++..... ...+. +|...|.+++|+|++++|++|+.|+.
T Consensus 57 ~~~--h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~------~h~~~v~~v~~sp~~~~l~s~s~D~~ 128 (345)
T 3fm0_A 57 SEG--HQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE------GHENEVKSVAWAPSGNLLATCSRDKS 128 (345)
T ss_dssp CSS--CSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccc--cCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc------CCCCCceEEEEeCCCCEEEEEECCCe
Confidence 356 999999999999999999999999999999887643 23333 68899999999999999999999999
Q ss_pred EEEEeCC-C---ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEeecCCCE
Q psy17902 214 IKLWSSS-L---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDILAKNRV 287 (454)
Q Consensus 214 v~vw~~~-~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~ 287 (454)
|++||+. . ..+..+..|...|.+++|+|++.+|++|+.|+.|++||+.++. +...+.+|...|++++|+|++++
T Consensus 129 v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~ 208 (345)
T 3fm0_A 129 VWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR 208 (345)
T ss_dssp EEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE
Confidence 9999983 2 2356778999999999999999999999999999999998775 44678899999999999999999
Q ss_pred EEEeeCCCcEEEeeccCCe---------------EE-EEcc-ccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcc--
Q psy17902 288 ISSGGTDKSVRVWKIQEES---------------QL-VFNG-HSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVP-- 347 (454)
Q Consensus 288 l~~~~~dg~i~i~d~~~~~---------------~~-~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~-- 347 (454)
|++++.|++|++|+..... ++ .+.+ |...+..+.+. .+..|++++.|+.|++|+......
T Consensus 209 l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~ 288 (345)
T 3fm0_A 209 LASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQ 288 (345)
T ss_dssp EEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTT
T ss_pred EEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcc
Confidence 9999999999999974321 11 2233 66777777665 567899999999999999876432
Q ss_pred --ceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceeeE
Q psy17902 348 --THTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEF 401 (454)
Q Consensus 348 --~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~ 401 (454)
...+.... ...|...|++++|+|++. +||+|+.||+|++|++.+++.+..
T Consensus 289 ~~~~~~~~~~----~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 289 QPTFSLTAHL----HQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp SCCEEEEEEE----TTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred eeeEEEEeee----cccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 11111110 123667799999999884 999999999999999988765543
No 66
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-37 Score=287.75 Aligned_cols=252 Identities=16% Similarity=0.235 Sum_probs=211.8
Q ss_pred EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCC--CcEEEEe
Q psy17902 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANN--NELVASG 208 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~ 208 (454)
...+.+ |.+.|++++|+|++++|++|+.||.|++|++.. ......+. +|...|.+++|+++ +.+|++|
T Consensus 4 ~~~~~~--h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~l~s~ 75 (379)
T 3jrp_A 4 VVIANA--HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT------GHEGPVWRVDWAHPKFGTILASC 75 (379)
T ss_dssp -CCEEE--CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC------CCSSCEEEEEECCGGGCSEEEEE
T ss_pred cEEecC--CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec------CCCCcEEEEEeCCCCCCCEEEEe
Confidence 456778 999999999999999999999999999999983 33333333 68889999999977 9999999
Q ss_pred cCCCcEEEEeC-CCc--cEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEe
Q psy17902 209 DNNSNIKLWSS-SLE--HLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDI 281 (454)
Q Consensus 209 ~~dg~v~vw~~-~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~ 281 (454)
+.||.|++||+ .+. .+..+..|...|.+++|+|+ +.+|++++.||.|++||+.++. ....+..|...|.+++|
T Consensus 76 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 76 SYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred ccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 99999999999 444 67778889999999999999 9999999999999999998873 34566789999999999
Q ss_pred ec-------------CCCEEEEeeCCCcEEEeeccCCeE----E-EEccccCCeEEEEecC----CCEEEEEeCCCCEEE
Q psy17902 282 LA-------------KNRVISSGGTDKSVRVWKIQEESQ----L-VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSL 339 (454)
Q Consensus 282 ~~-------------~~~~l~~~~~dg~i~i~d~~~~~~----~-~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~i 339 (454)
+| ++.+|++++.||.|++||++++.. . .+.+|...+.++.+.+ +.+|++++.||.|++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 156 APATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp CCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred cCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 99 689999999999999999987542 2 6677888998888775 468999999999999
Q ss_pred EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
||+.++........... ..+...|++++|+|++++|++++.||.|++|++..+
T Consensus 236 wd~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKE----EKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EEESSTTSCCEEEESSS----SCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred EeCCCCCccceeeeecc----ccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 99988753322222211 125566999999999999999999999999999743
No 67
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.2e-37 Score=280.53 Aligned_cols=275 Identities=19% Similarity=0.304 Sum_probs=230.2
Q ss_pred cCcEeeeehhhhc-cCceeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCce
Q psy17902 115 EGKLRVNIADRLA-NATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI 193 (454)
Q Consensus 115 ~~~~~~~~~~~~~-~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v 193 (454)
++.+..|-..... ......+.+.+ |...|.+++|+|++++|++|+.||.|++|+........... .+...+
T Consensus 60 D~~i~vWd~~~~~~~~~~~~~~l~~--h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~------~~~~~~ 131 (340)
T 4aow_A 60 DKTIIMWKLTRDETNYGIPQRALRG--HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFV------GHTKDV 131 (340)
T ss_dssp TSCEEEEEECCSSSCSEEEEEEECC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCE
T ss_pred CCeEEEEECCCCCcccceeeEEEeC--CCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeec------CCCCce
Confidence 4555555433322 22346778889 99999999999999999999999999999998877665544 466788
Q ss_pred EEEEEeCCCcEEEEecCCCcEEEEeCCCc--cEEeecccCCCeEEEEEcCCC--CEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902 194 LALAVANNNELVASGDNNSNIKLWSSSLE--HLHTFTGHKAPITGLAISFEC--DTLYSSSNDRSIKVWNIEDRAYVETL 269 (454)
Q Consensus 194 ~~~~~~~~~~~l~~~~~dg~v~vw~~~~~--~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~ 269 (454)
..+.+++++.+|++|+.|+.+++||+... .......|...+.+++|++++ .++++++.|+.|++||+.+++.+..+
T Consensus 132 ~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~ 211 (340)
T 4aow_A 132 LSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNH 211 (340)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred eEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEe
Confidence 89999999999999999999999999433 344567899999999998864 57889999999999999999999999
Q ss_pred eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902 270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH 349 (454)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 349 (454)
.+|...|++++|+|++++|++|+.|+.|++||+++...+....+...+..+.+.++..+++++.|+.|++||+..+..+.
T Consensus 212 ~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 212 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE
Confidence 99999999999999999999999999999999999998866666778888888888889999999999999999988877
Q ss_pred eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902 350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR 397 (454)
Q Consensus 350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~ 397 (454)
.+...........|...|++++|+|+|++|++|+.||.|+|||+.+|.
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 292 ELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred eccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 766544333444577889999999999999999999999999999874
No 68
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-36 Score=274.27 Aligned_cols=247 Identities=21% Similarity=0.352 Sum_probs=215.1
Q ss_pred CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee
Q psy17902 187 RKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY 265 (454)
Q Consensus 187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 265 (454)
.+|...|.+++|+|++++|++|+.||.|++|++ ++.....+.+|...|.+++|+|++++|++|+.||.|++||+.+++.
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence 368899999999999999999999999999999 7778888999999999999999999999999999999999999999
Q ss_pred EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecC
Q psy17902 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSIL 343 (454)
Q Consensus 266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~ 343 (454)
+..+.+|...|.++.|+|++++|++|+.|+.|++||++++... .+..|...+.++.+. ++.+|++++.||.|++||+.
T Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 9999999999999999999999999999999999999988876 777888888887775 56789999999999999999
Q ss_pred CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc-CCCCE
Q psy17902 344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT-SDHKH 422 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s-~d~~~ 422 (454)
+++.+..+... +...+..++|+|++++|++++.||.|++||+.+++.+..+.............|+ +++.+
T Consensus 180 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 180 SGQCLKTLIDD--------DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp TCCEEEEECCS--------SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred CCceeeEEecc--------CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 98877765432 2344999999999999999999999999999999888887763222222233444 67778
Q ss_pred EEEEecCCCceeeeeeeCCC
Q psy17902 423 LVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 423 l~~~~~~d~~i~~W~~~~~~ 442 (454)
|+++ +.|+.|++|+...+.
T Consensus 252 l~sg-~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 252 IVSG-SEDNLVYIWNLQTKE 270 (312)
T ss_dssp EEEC-CTTSCEEEEETTTCC
T ss_pred EEEE-CCCCEEEEEECCCch
Confidence 8877 899999999986543
No 69
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-37 Score=288.56 Aligned_cols=259 Identities=17% Similarity=0.313 Sum_probs=214.1
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee-cccCCcccCCCCCCceEEEEEeCC-CcEEEEec
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV-CSSPFVKTDRKSYPPILALAVANN-NELVASGD 209 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~ 209 (454)
....+.+ |...|.+++|+|++++|++|+.|+.|++|++.+.... ..........+|...|.++.|+|+ +..|++|+
T Consensus 100 ~~~~~~~--h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s 177 (380)
T 3iz6_a 100 KTHAIKL--HCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS 177 (380)
T ss_dssp EEEEEEC--CCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC
T ss_pred cceEEec--CCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC
Confidence 4566777 9999999999999999999999999999999754321 112222333478889999999996 45799999
Q ss_pred CCCcEEEEeC-CCccEEee-----cccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCC-CceeEEEeeccCCceeEEEe
Q psy17902 210 NNSNIKLWSS-SLEHLHTF-----TGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIE-DRAYVETLFGHQSAITSLDI 281 (454)
Q Consensus 210 ~dg~v~vw~~-~~~~~~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~ 281 (454)
.|+.|++||+ ++..+..+ .+|...|.+++|++ ++++|++|+.||+|++||++ ....+..+.+|...|++++|
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~ 257 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKF 257 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEE
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEE
Confidence 9999999999 66666665 67999999999987 78999999999999999998 45777888899999999999
Q ss_pred ecCCCEEEEeeCCCcEEEeeccCCeEE-EEcccc-------CCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902 282 LAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHS-------RGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIP 352 (454)
Q Consensus 282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-------~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 352 (454)
+|++.+|++|+.||+|++||++++..+ .+..+. ..+.++.+ +++.+|++|+.||.|++||+..+..+..+.
T Consensus 258 ~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~ 337 (380)
T 3iz6_a 258 FPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLG 337 (380)
T ss_dssp CTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred ecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEe
Confidence 999999999999999999999998877 333322 12455554 568899999999999999998887776653
Q ss_pred cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR 397 (454)
Q Consensus 353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~ 397 (454)
... ..|...|++++|+|+|.+|++|+.||+|++|++...+
T Consensus 338 ~~~-----~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 338 TLQ-----NSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp CSC-----SSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ccc-----CCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 221 1366779999999999999999999999999997654
No 70
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.6e-37 Score=331.51 Aligned_cols=297 Identities=19% Similarity=0.335 Sum_probs=258.6
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCc----------------------------
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV---------------------------- 183 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---------------------------- 183 (454)
....+.+ |.+.|++++|+|++++|++++.||.|++||+.++.....+...
T Consensus 735 ~~~~~~~--h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 735 CRNTMFG--HTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp EEEEECC--CSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred hhheecC--CCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 4556777 9999999999999999999999999999999876543322100
Q ss_pred ---------------------ccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcC
Q psy17902 184 ---------------------KTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISF 241 (454)
Q Consensus 184 ---------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~ 241 (454)
....+|...|.+++|+|++.++++++.+|.|++|++ ++..+..+.+|...|.+++|+|
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 892 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSP 892 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECC
Confidence 001257788999999999999999999999999999 7777888899999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCC------------------------------------------------------------
Q psy17902 242 ECDTLYSSSNDRSIKVWNIE------------------------------------------------------------ 261 (454)
Q Consensus 242 ~~~~l~~~~~dg~i~iwd~~------------------------------------------------------------ 261 (454)
++.+|++++.||.|++|++.
T Consensus 893 dg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 972 (1249)
T 3sfz_A 893 DGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH 972 (1249)
T ss_dssp TSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred CCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence 99999999999999988843
Q ss_pred -------------------CceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEe
Q psy17902 262 -------------------DRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR 322 (454)
Q Consensus 262 -------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~ 322 (454)
++..+..+.+|...|++++|+|++++|++++.||.|++||+.++.......|...+..+.+
T Consensus 973 g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~ 1052 (1249)
T 3sfz_A 973 LEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRL 1052 (1249)
T ss_dssp SSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEE
T ss_pred CCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEE
Confidence 2233344557889999999999999999999999999999999998888899999999999
Q ss_pred cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902 323 VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 323 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 402 (454)
.++..+++++.||.|++||+.++.....+.. |...|++++|+|++++|++++.||+|++||+.++..+..+
T Consensus 1053 ~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~---------~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l 1123 (1249)
T 3sfz_A 1053 LQDSRLLSWSFDGTVKVWNVITGRIERDFTC---------HQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLSPLHEL 1123 (1249)
T ss_dssp CSSSEEEEEESSSEEEEEETTTTCCCEEEEC---------CSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSSCSBCC
T ss_pred cCCCcEEEEECCCcEEEEECCCCceeEEEcc---------cCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcceeeee
Confidence 9999999999999999999999988887764 3445999999999999999999999999999999888888
Q ss_pred ccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 403 QDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 403 ~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
.. |.+.|++++|+|+|++|+++ +.||.|++|+..++.
T Consensus 1124 ~~--h~~~v~~~~~s~dg~~lat~-~~dg~i~vwd~~~~~ 1160 (1249)
T 3sfz_A 1124 KG--HNGCVRCSAFSLDGILLATG-DDNGEIRIWNVSDGQ 1160 (1249)
T ss_dssp CC--CSSCEEEEEECSSSSEEEEE-ETTSCCCEEESSSSC
T ss_pred cc--CCCcEEEEEECCCCCEEEEE-eCCCEEEEEECCCCc
Confidence 76 88899999999999999999 899999999987654
No 71
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.9e-37 Score=288.67 Aligned_cols=290 Identities=19% Similarity=0.193 Sum_probs=233.0
Q ss_pred CCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeC-
Q psy17902 143 ASITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWSS- 219 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~- 219 (454)
.....++++|+...+ ++++.||.|+||++........ ......+|...|.+++|+| ++.+|++|+.||.|+||++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~--~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDK--NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCT--TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCC--CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 345578899876544 4578899999999976433211 1122236889999999999 9999999999999999999
Q ss_pred CC-------ccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEe--eccCCceeEEEeecCCCEEE
Q psy17902 220 SL-------EHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETL--FGHQSAITSLDILAKNRVIS 289 (454)
Q Consensus 220 ~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~ 289 (454)
.+ ..+..+.+|...|.+++|+|++ .+|++++.||.|++||+.+++.+..+ .+|...|.+++|+|++++|+
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 33 5678889999999999999998 69999999999999999999999888 78999999999999999999
Q ss_pred EeeCCCcEEEeeccCCeEE-EE-ccccCC-eEEEEec-CCCEEEEE---eCCCCEEEEecCCCcc-ceeeecccCCCCCC
Q psy17902 290 SGGTDKSVRVWKIQEESQL-VF-NGHSRG-IDMTRRV-NDQQFITC---GEDGTLSLWSILKKVP-THTIPVAHGYDSSS 361 (454)
Q Consensus 290 ~~~~dg~i~i~d~~~~~~~-~~-~~~~~~-i~~~~~~-~~~~l~~~---~~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~ 361 (454)
+++.||.|++||++++..+ .+ ..|... +..+.+. ++.+|++| +.|+.|++||+.+... +......
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~------- 265 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD------- 265 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC-------
T ss_pred EEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc-------
Confidence 9999999999999998877 44 566654 5555554 55566666 6899999999988654 3333322
Q ss_pred CCCCcEEEEEEecCCCEEE-EecCCCcEEEEEcCCCce-eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 362 SEPNWITSVACLHNSDLVA-SGSYDGCVKLWKITPKRT-LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 362 ~~~~~i~~~~~s~~~~~l~-~~~~dg~v~iwd~~~~~~-~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
+...+.+++|+|++++|+ +|+.||.|++|++.++.. +..+....+..+|.+++|+|++.++++ .++.+++|+..
T Consensus 266 -~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s---~~~~~~~~~l~ 341 (402)
T 2aq5_A 266 -TSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN---KCEIARFYKLH 341 (402)
T ss_dssp -CCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG---GTEEEEEEEEE
T ss_pred -CCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee---cceeEEEEEcC
Confidence 234499999999999886 566799999999998874 666665556789999999999998764 46699999998
Q ss_pred CCCeeE
Q psy17902 440 KGVKNT 445 (454)
Q Consensus 440 ~~~~~~ 445 (454)
.+....
T Consensus 342 ~~~~~~ 347 (402)
T 2aq5_A 342 ERKCEP 347 (402)
T ss_dssp TTEEEE
T ss_pred CCcEEE
Confidence 764433
No 72
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.2e-37 Score=315.27 Aligned_cols=159 Identities=9% Similarity=0.103 Sum_probs=140.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
|...|.+++|+| +++|++++.|++|++||+.+++.+..+. +...|++++|+|++++|++|+.||.|++||+.
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~ 128 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-------VPGKITSIDTDASLDWMLIGLQNGSMIVYDID 128 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-------CSSCEEEEECCTTCSEEEEEETTSCEEEEETT
T ss_pred CCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 888999999999 8899999999999999999988766553 45689999999999999999999999999995
Q ss_pred CccE------------EeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeecc---------------
Q psy17902 221 LEHL------------HTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGH--------------- 272 (454)
Q Consensus 221 ~~~~------------~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--------------- 272 (454)
...+ ..+.+|.+.|++++|+|+ +..|++|+.||.| +||+++++.+..+..|
T Consensus 129 ~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 207 (902)
T 2oaj_A 129 RDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTN 207 (902)
T ss_dssp TTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTT
T ss_pred CCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccc
Confidence 4433 234679999999999996 5789999999999 9999999988887655
Q ss_pred ---CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE
Q psy17902 273 ---QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL 308 (454)
Q Consensus 273 ---~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 308 (454)
...|++++|+|++.+|++++.||.|++||+++++.+
T Consensus 208 ~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 208 EKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp SCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred cccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 477999999999999999999999999999876654
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-36 Score=301.47 Aligned_cols=271 Identities=15% Similarity=0.226 Sum_probs=233.2
Q ss_pred eeEeEeccCCCCCC-eEEEEEcC--CCCEEEEEeCCCeEEEEEcCCC--------ceecccCCcccCCCCCCceEEEEEe
Q psy17902 131 VVCTKFNGKPHRAS-ITCIAVTS--DSKHVYSACKDGIIIKWLLETR--------SKVCSSPFVKTDRKSYPPILALAVA 199 (454)
Q Consensus 131 ~~~~~~~~~~h~~~-V~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~~ 199 (454)
.....+.+ |.+. |++++|+| ++++|++|+.||.|++||+.++ .....+. .|...|.+++|+
T Consensus 54 ~~~~~~~~--h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s 125 (615)
T 1pgu_A 54 PPVVQFTG--HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ------VLAGPISDISWD 125 (615)
T ss_dssp CSEEEECT--TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE------CCSSCEEEEEEC
T ss_pred ccceEEec--CCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhh------cccccEEEEEEe
Confidence 45677888 9999 99999999 9999999999999999999754 3333332 477899999999
Q ss_pred CCCcEEEEecCC----CcEEEEeCCCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCC
Q psy17902 200 NNNELVASGDNN----SNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQS 274 (454)
Q Consensus 200 ~~~~~l~~~~~d----g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 274 (454)
|++++|++++.+ +.|.+|+ .+..+..+..|...|.+++|+|++. .|++++.|+.|++||+.+++.+..+.+|..
T Consensus 126 ~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~ 204 (615)
T 1pgu_A 126 FEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHK 204 (615)
T ss_dssp TTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSC
T ss_pred CCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCC
Confidence 999999999987 7899999 6677888999999999999999997 899999999999999999999999999999
Q ss_pred ---ceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEEEEc-----cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCC
Q psy17902 275 ---AITSLDILAK-NRVISSGGTDKSVRVWKIQEESQLVFN-----GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK 345 (454)
Q Consensus 275 ---~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 345 (454)
.|++++|+|+ +++|++++.||.|++||+.+++.+... .|...+..+.+.++.+|++++.||.|++||+.++
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTT
T ss_pred CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCC
Confidence 9999999999 999999999999999999998887443 8888998888877779999999999999999999
Q ss_pred ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD 419 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 419 (454)
+.+..+..... .....+.++.|+ ++.+|++++.||.|++||+.++..+..+.. |...|++++| |+
T Consensus 285 ~~~~~~~~~~~-----~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~--~~~~v~~~~~-~~ 349 (615)
T 1pgu_A 285 KCVQKWTLDKQ-----QLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISG--HNKGITALTV-NP 349 (615)
T ss_dssp EEEEEEECCTT-----CGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECC--CSSCEEEEET-TT
T ss_pred cEEEEEcCCCC-----cccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeC--CCCCEEEEEe-cC
Confidence 88888765421 123448888886 888999999999999999998877777765 5556666666 54
No 74
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.5e-37 Score=283.80 Aligned_cols=295 Identities=15% Similarity=0.175 Sum_probs=218.9
Q ss_pred EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecC
Q psy17902 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDN 210 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~ 210 (454)
...+.+ |.+.|++++|+|++++|++|+.||.|++|++.+....... .....+|...|.+++|+| ++.+|++|+.
T Consensus 4 ~~~~~g--H~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 4 QPFDSG--HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWEL--SDSWRAHDSSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp CCEECC--CSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEE--EEEEECCSSCEEEEEECCGGGCSEEEEEET
T ss_pred cccCcc--cccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCccee--cceeccCCCcEEEEEEcCCCCCCEEEEEcC
Confidence 345677 9999999999999999999999999999999876422111 111125888999999999 6999999999
Q ss_pred CCcEEEEeCCC----------ccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCceeEEEee--------
Q psy17902 211 NSNIKLWSSSL----------EHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRAYVETLF-------- 270 (454)
Q Consensus 211 dg~v~vw~~~~----------~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------- 270 (454)
||.|++||+.. ..+..+..|...|.+++|+|+ +.+|++++.||.|++||+.+++.+..+.
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 99999999943 457788899999999999999 9999999999999999998876543332
Q ss_pred -----ccCCceeEEEeecC---CCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecCC-----CEEEEEeCC
Q psy17902 271 -----GHQSAITSLDILAK---NRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVND-----QQFITCGED 334 (454)
Q Consensus 271 -----~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~~-----~~l~~~~~d 334 (454)
.|...+.+++|+|+ +.+|++++.++.+.+|+...+... .+.+|...+.++.+.++ .+|++++.|
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 57889999999997 899999999999988888777642 66788899998888876 589999999
Q ss_pred CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe----cCCCcEEEEEcCCCceeeEeccCCCcee
Q psy17902 335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG----SYDGCVKLWKITPKRTLEFLQDIPLSGV 410 (454)
Q Consensus 335 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~----~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 410 (454)
|.|++||+..+.......... ..+.....++....++.+ .....+.+|+......+..+.. |.+.
T Consensus 240 g~i~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~ 308 (351)
T 3f3f_A 240 GRIRIFKITEKLSPLASEESL---------TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD--HNGE 308 (351)
T ss_dssp SCEEEEEEEECC------------------------------------------------CCSEEEEEEEEECT--TSSC
T ss_pred CeEEEEeCCCCcCccccCCcc---------cceeccCCCcccccccccccccccceeeeecccccccEEEEEec--cccc
Confidence 999999998764443322111 113333333443333333 3344566666665666776765 8889
Q ss_pred eeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 411 INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 411 v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
|++++|+|++++|+++ +.|+.|++|+...+..
T Consensus 309 v~~~~~s~~~~~l~s~-~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSA-GDDGKVRLWKATYSNE 340 (351)
T ss_dssp EEEEEECSSSCCEEEE-ETTSCEEEEEECTTSC
T ss_pred EEEEEEcCCCCEEEEe-cCCCcEEEEecCcCcc
Confidence 9999999999999998 8999999999987643
No 75
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.8e-36 Score=297.73 Aligned_cols=287 Identities=17% Similarity=0.240 Sum_probs=228.7
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC---ceEEEEEeCC-CcEEE
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP---PILALAVANN-NELVA 206 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~ 206 (454)
....+.+ |...|++++|+|+++ +|++++.||.|++||+.++.....+. .|.. .|.+++|+|+ +++|+
T Consensus 152 ~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~l~ 223 (615)
T 1pgu_A 152 SLGEVSG--HSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR------THHKQGSFVRDVEFSPDSGEFVI 223 (615)
T ss_dssp EEEECCS--CSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC------SSSCTTCCEEEEEECSTTCCEEE
T ss_pred cceeeec--CCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec------ccCCCCceEEEEEECCCCCCEEE
Confidence 5567778 999999999999998 89999999999999999888776665 5777 8999999999 99999
Q ss_pred EecCCCcEEEEeC-CCccEEee-c---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-----------
Q psy17902 207 SGDNNSNIKLWSS-SLEHLHTF-T---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF----------- 270 (454)
Q Consensus 207 ~~~~dg~v~vw~~-~~~~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----------- 270 (454)
+++.||.|++||+ ++..+..+ . .|...|.+++|+ ++.+|++++.||.|++||+.+++.+..+.
T Consensus 224 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 302 (615)
T 1pgu_A 224 TVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQV 302 (615)
T ss_dssp EEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEE
T ss_pred EEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCcee
Confidence 9999999999999 67777777 5 899999999999 99999999999999999998765544332
Q ss_pred ----------------------------------ccCCceeEEEeec---------------------------------
Q psy17902 271 ----------------------------------GHQSAITSLDILA--------------------------------- 283 (454)
Q Consensus 271 ----------------------------------~~~~~v~~~~~~~--------------------------------- 283 (454)
+|...|++++| |
T Consensus 303 ~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~ 381 (615)
T 1pgu_A 303 GVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNS 381 (615)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECC
T ss_pred EEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEEC
Confidence 23333333333 2
Q ss_pred CCCEEEEeeCCCcEEEeecc------------------------------------------------------------
Q psy17902 284 KNRVISSGGTDKSVRVWKIQ------------------------------------------------------------ 303 (454)
Q Consensus 284 ~~~~l~~~~~dg~i~i~d~~------------------------------------------------------------ 303 (454)
++..|++++.|+.|++|++.
T Consensus 382 ~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 461 (615)
T 1pgu_A 382 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAV 461 (615)
T ss_dssp STTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEE
T ss_pred CCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEE
Confidence 24444444444444444443
Q ss_pred --------------CCeE--EEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902 304 --------------EESQ--LVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW 366 (454)
Q Consensus 304 --------------~~~~--~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (454)
++.. ..+..|...+.++.+. ++.+|++++.||.|++||+.++..+..+... |...
T Consensus 462 ~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--------h~~~ 533 (615)
T 1pgu_A 462 GLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF--------RTSK 533 (615)
T ss_dssp EETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC--------CSSC
T ss_pred eecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC--------CCCc
Confidence 2222 2233456667766665 5778999999999999999988887665431 4556
Q ss_pred EEEEEEec----------CCCEEEEecCCCcEEEEEcCCC-ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902 367 ITSVACLH----------NSDLVASGSYDGCVKLWKITPK-RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 367 i~~~~~s~----------~~~~l~~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~ 435 (454)
|++++|+| ++++|++|+.||.|++|++.++ +.+..+.. |...|++++|+|+++ |+++ +.|+.|++
T Consensus 534 v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--h~~~v~~l~~s~~~~-l~s~-~~d~~v~i 609 (615)
T 1pgu_A 534 INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA--HKDGVNNLLWETPST-LVSS-GADACIKR 609 (615)
T ss_dssp EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTS--STTCEEEEEEEETTE-EEEE-ETTSCEEE
T ss_pred eeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhc--CccceEEEEEcCCCC-eEEe-cCCceEEE
Confidence 99999999 9999999999999999999988 67777765 889999999999999 8887 89999999
Q ss_pred eeeeC
Q psy17902 436 WKTIK 440 (454)
Q Consensus 436 W~~~~ 440 (454)
|++..
T Consensus 610 w~~~~ 614 (615)
T 1pgu_A 610 WNVVL 614 (615)
T ss_dssp EEEC-
T ss_pred Eeeec
Confidence 99864
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-37 Score=282.44 Aligned_cols=245 Identities=16% Similarity=0.254 Sum_probs=199.2
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--ecccCCcccCCCCCCceEEEEEeC--CCcEEEEec
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSK--VCSSPFVKTDRKSYPPILALAVAN--NNELVASGD 209 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~ 209 (454)
..+.+ |.+.|++++|+|+|++||+|+.|++|+|||+.++.. ...+. +|...|.+++|++ ++++|++|+
T Consensus 7 ~~~~~--H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~------gH~~~V~~v~~~~~~~~~~l~s~s 78 (316)
T 3bg1_A 7 TVDTS--HEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLR------GHEGPVWQVAWAHPMYGNILASCS 78 (316)
T ss_dssp ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEE------CCSSCEEEEEECCGGGSSCEEEEE
T ss_pred eeccc--ccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEc------CCCccEEEEEeCCCCCCCEEEEEE
Confidence 34567 999999999999999999999999999999987643 22222 6889999999986 489999999
Q ss_pred CCCcEEEEeCCC---ccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCcee---EEEeeccCCceeEEEe
Q psy17902 210 NNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRAY---VETLFGHQSAITSLDI 281 (454)
Q Consensus 210 ~dg~v~vw~~~~---~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~ 281 (454)
.|+.|++||+.. ..+..+.+|...|.+++|+|+ +.+|++|+.|+.|++||+..+.. ...+.+|...|.+++|
T Consensus 79 ~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 79 YDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp TTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred CCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEE
Confidence 999999999943 356678899999999999997 78999999999999999987632 3455689999999999
Q ss_pred ecC-----------------CCEEEEeeCCCcEEEeeccCCe---EE-EEccccCCeEEEEecCC-----CEEEEEeCCC
Q psy17902 282 LAK-----------------NRVISSGGTDKSVRVWKIQEES---QL-VFNGHSRGIDMTRRVND-----QQFITCGEDG 335 (454)
Q Consensus 282 ~~~-----------------~~~l~~~~~dg~i~i~d~~~~~---~~-~~~~~~~~i~~~~~~~~-----~~l~~~~~dg 335 (454)
+|+ +.+|++|+.|+.|++||++... .. .+.+|...|.++.+.+. .+|++++.|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 987 4689999999999999997542 22 57789999998888764 6899999999
Q ss_pred CEEEEecCCCc----cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 336 TLSLWSILKKV----PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 336 ~i~iwd~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
+|++|++.+.. ....+. .|...|.+++|+|++++||+++.||+|++|+...
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~---------~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLH---------KFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEE---------ECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred eEEEEEccCccccchhhhhhh---------cCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 99999987631 111221 1345699999999999999999999999999753
No 77
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-36 Score=282.78 Aligned_cols=239 Identities=23% Similarity=0.391 Sum_probs=205.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS- 219 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~- 219 (454)
+...|.+++|+|++++|++|+.||.|++||+.++.....+. +|...|.+++|+|++.+|++|+.|+.|++||+
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~------~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~ 195 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQ------GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 195 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc------cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECC
Confidence 44469999999999999999999999999999887766655 68899999999999999999999999999999
Q ss_pred CCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEe-------eccCCceeEEEeecCCCEEEEe
Q psy17902 220 SLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETL-------FGHQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 220 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~ 291 (454)
++.....+. +...+.+++|+| ++.+|++|+.||.|++||+.++..+..+ .+|...|.+++|+|++.+|++|
T Consensus 196 ~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 196 TGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp TTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred CCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 445444444 667899999999 8999999999999999999998877666 5799999999999999999999
Q ss_pred eCCCcEEEeeccCCe-------------EEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCC
Q psy17902 292 GTDKSVRVWKIQEES-------------QLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY 357 (454)
Q Consensus 292 ~~dg~i~i~d~~~~~-------------~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 357 (454)
+.|+.|++||+++.. ...+.+|...+.++.+. ++.+|++++.|+.|++||+.++.++..+..
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~---- 350 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG---- 350 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEEC----
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECC----
Confidence 999999999997632 12567788888777665 577899999999999999999988877753
Q ss_pred CCCCCCCCcEEEEEEec------CCCEEEEecCCCcEEEEEcCC
Q psy17902 358 DSSSSEPNWITSVACLH------NSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 358 ~~~~~~~~~i~~~~~s~------~~~~l~~~~~dg~v~iwd~~~ 395 (454)
|...|.+++|++ ++++|++|+.||+|+||++..
T Consensus 351 -----h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 351 -----HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp -----CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred -----CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 455599999886 678999999999999999864
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-36 Score=305.21 Aligned_cols=255 Identities=21% Similarity=0.358 Sum_probs=218.7
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
..+.+.+ |...|.+++|+|++++|++|+.||.|+|||+.++.....+. +|...|.+++|+|++++|++|+.|
T Consensus 422 ~~~~~~~--h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~------~h~~~v~~~~~s~~~~~l~s~s~D 493 (694)
T 3dm0_A 422 AQRRLTG--HSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFV------GHTKDVLSVAFSLDNRQIVSASRD 493 (694)
T ss_dssp EEEEEEC--CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEECTTSSCEEEEETT
T ss_pred ccceecC--CCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEe------CCCCCEEEEEEeCCCCEEEEEeCC
Confidence 4567888 99999999999999999999999999999999887776654 688999999999999999999999
Q ss_pred CcEEEEeCCCccEEee----cccCCCeEEEEEcCCC--CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC
Q psy17902 212 SNIKLWSSSLEHLHTF----TGHKAPITGLAISFEC--DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN 285 (454)
Q Consensus 212 g~v~vw~~~~~~~~~~----~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~ 285 (454)
++|++||+.+.....+ .+|...|.+++|+|++ ..|++|+.|++|++||+.+++....+.+|...|++++|+|++
T Consensus 494 ~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg 573 (694)
T 3dm0_A 494 RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDG 573 (694)
T ss_dssp SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS
T ss_pred CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCC
Confidence 9999999865544443 4688999999999986 689999999999999999999999999999999999999999
Q ss_pred CEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCC-------
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD------- 358 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------- 358 (454)
++|++|+.||.|++||+++++.+....+...+.++.++++..+++++.++.|++||+.++..+..+.......
T Consensus 574 ~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 653 (694)
T 3dm0_A 574 SLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNS 653 (694)
T ss_dssp SEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC---------
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhcccccccccccccc
Confidence 9999999999999999999988865566677888888877777777778889999999998877765332111
Q ss_pred ---CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902 359 ---SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT 394 (454)
Q Consensus 359 ---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~ 394 (454)
....+...+++++|+|+|++|++|+.||+|+||++.
T Consensus 654 ~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 654 GPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp -------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 011123358899999999999999999999999985
No 79
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-36 Score=309.23 Aligned_cols=200 Identities=14% Similarity=0.077 Sum_probs=170.2
Q ss_pred eccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEE
Q psy17902 136 FNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIK 215 (454)
Q Consensus 136 ~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~ 215 (454)
..| |.+.|++++|+|++++||+|+.||.|+||+..+....... .|..+|.+++|+| +++|++++.|+.|+
T Consensus 13 ~~g--h~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-------~~~~~V~~l~fsp-g~~L~S~s~D~~v~ 82 (902)
T 2oaj_A 13 KYG--MSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-------EDRSAIKEMRFVK-GIYLVVINAKDTVY 82 (902)
T ss_dssp EEE--CSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-------SSCCCEEEEEEET-TTEEEEEETTCEEE
T ss_pred ccC--CCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-------CCCCCEEEEEEcC-CCEEEEEECcCeEE
Confidence 346 9999999999999999999999999999998876554432 3667899999999 88999999999999
Q ss_pred EEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE-----------EEeeccCCceeEEEeec
Q psy17902 216 LWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV-----------ETLFGHQSAITSLDILA 283 (454)
Q Consensus 216 vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----------~~~~~~~~~v~~~~~~~ 283 (454)
|||+ ++..+..+. |...|++++|+|++++|++|+.||.|++||+.++... ..+.+|.+.|++++|+|
T Consensus 83 lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 83 VLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 9999 566666665 7789999999999999999999999999999988754 23357899999999999
Q ss_pred C-CCEEEEeeCCCcEEEeeccCCeEE-EEccc------------------cCCeEEEEec-CCCEEEEEeCCCCEEEEec
Q psy17902 284 K-NRVISSGGTDKSVRVWKIQEESQL-VFNGH------------------SRGIDMTRRV-NDQQFITCGEDGTLSLWSI 342 (454)
Q Consensus 284 ~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~------------------~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~ 342 (454)
+ +..|++|+.||.| +||++++... .+..| ...+.++.|. ++.+|++++.||.|++||+
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 6 4789999999999 9999998876 44443 3567777665 5778999999999999999
Q ss_pred CCCcc
Q psy17902 343 LKKVP 347 (454)
Q Consensus 343 ~~~~~ 347 (454)
.++++
T Consensus 241 ~~g~~ 245 (902)
T 2oaj_A 241 NSGHM 245 (902)
T ss_dssp TTCCE
T ss_pred CCCcE
Confidence 76543
No 80
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-37 Score=297.07 Aligned_cols=295 Identities=9% Similarity=-0.027 Sum_probs=219.9
Q ss_pred eEeccCCCCCCeEEEEEcCC------CCEEEEEeCCCeEEEEEcCCCceec-----ccCCcccCCCCCCceEEEEEeCCC
Q psy17902 134 TKFNGKPHRASITCIAVTSD------SKHVYSACKDGIIIKWLLETRSKVC-----SSPFVKTDRKSYPPILALAVANNN 202 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~------~~~l~~~~~dg~i~iwd~~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~ 202 (454)
..+.+ |.+.|.+++|+|+ +.+||+++.||+|+|||+.++.... .........+|...|++++|++++
T Consensus 201 ~~l~~--~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~ 278 (524)
T 2j04_B 201 QTIVH--SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT 278 (524)
T ss_dssp EEEEE--CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS
T ss_pred EEEEe--cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC
Confidence 44667 8999999999996 5799999999999999998764220 000111223678899999999864
Q ss_pred cEEEEecCCCcEEEEeCC-C-ccEEeecccCCCeEEE--EEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCC--c
Q psy17902 203 ELVASGDNNSNIKLWSSS-L-EHLHTFTGHKAPITGL--AISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQS--A 275 (454)
Q Consensus 203 ~~l~~~~~dg~v~vw~~~-~-~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~ 275 (454)
.|++|+.||+|++||+. + .+...+.+|...|+++ +|+|++ .+|++|+.|++|+|||+++++++..+.+|.. .
T Consensus 279 -~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 279 -TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp -EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred -eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 89999999999999994 3 3456688999999999 567887 8999999999999999999887777767653 5
Q ss_pred eeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902 276 ITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 276 v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 353 (454)
|.+++|+|++..|++++.|++|++||++++..+ .+.+|...|.++.+++ +..|++|+.||+|++||+... .+.....
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~ 436 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKN 436 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC--
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hcccccc
Confidence 889999999999999999999999999988764 6778999998888765 678999999999999998653 2222110
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEEEEcCCCC---EEEEEecC
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSLVFTSDHK---HLVAGIGT 429 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~---~l~~~~~~ 429 (454)
... ..+...+.+++|+|++..+.. .. .+.+|+.. ++..+..+.+ |.+.|++++|+|++. +|++| +.
T Consensus 437 ~~~----~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~~~~~l~g--h~~~V~~Vafsp~~~~~~~lAsg-~~ 506 (524)
T 2j04_B 437 SSA----TQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDVSKAKIDA--HGINITCTKWNETSAGGKCYAFS-NS 506 (524)
T ss_dssp --------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC---------------CCCSCCCEEECCSTTTTTEEEEE-CT
T ss_pred Ccc----ceeeeEEEEeccCCCCCeEEc-cC--CceecccccCCcceeeecC--CCceEEEEECCCCCCccHHHHhh-cc
Confidence 000 001224789999999985532 22 23444432 3556666665 889999999999965 77777 89
Q ss_pred CCceeeeeeeCCC
Q psy17902 430 EHRFGRWKTIKGV 442 (454)
Q Consensus 430 d~~i~~W~~~~~~ 442 (454)
+|.|++|+.....
T Consensus 507 ~g~vrlw~l~~~~ 519 (524)
T 2j04_B 507 AGLLTLEYLSLEH 519 (524)
T ss_dssp TSEEEEEECSCC-
T ss_pred CceEEEEEccccc
Confidence 9999999976543
No 81
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-37 Score=279.57 Aligned_cols=241 Identities=19% Similarity=0.343 Sum_probs=198.4
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc--cEEeecccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCC
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLE--HLHTFTGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIED 262 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~ 262 (454)
+|...|.+++|+|+|++||+|+.|++|+|||+ .+. .+..+.+|...|.+++|++ ++++|++|+.|++|++||+.+
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 68899999999999999999999999999999 333 4677899999999999986 489999999999999999988
Q ss_pred ce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCeEE----EEccccCCeEEEEecCC---------
Q psy17902 263 RA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEESQL----VFNGHSRGIDMTRRVND--------- 325 (454)
Q Consensus 263 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~i~~~~~~~~--------- 325 (454)
+. .+..+.+|...|++++|+|+ +.+|++|+.|+.|++||++..... .+.+|...+.++.+.+.
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence 73 56677889999999999998 789999999999999999876321 44567777776666543
Q ss_pred ---------CEEEEEeCCCCEEEEecCCCc---cceeeecccCCCCCCCCCCcEEEEEEecCC----CEEEEecCCCcEE
Q psy17902 326 ---------QQFITCGEDGTLSLWSILKKV---PTHTIPVAHGYDSSSSEPNWITSVACLHNS----DLVASGSYDGCVK 389 (454)
Q Consensus 326 ---------~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~v~ 389 (454)
.+|++++.|+.|++||+.... ++..+. .|..+|.+++|+|++ .+|++|+.||+|+
T Consensus 171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~---------~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~ 241 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE---------AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVF 241 (316)
T ss_dssp CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB---------CCSSCEEEEECCCCSSCSCCEEEEEETTCEEE
T ss_pred ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc---------cCCCceEEEEecCCCCCCCceEEEEcCCCeEE
Confidence 589999999999999997543 222222 366779999999986 7999999999999
Q ss_pred EEEcCCCc----eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 390 LWKITPKR----TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 390 iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
+|++.+.. ....+.. |.+.|.+++|+|++++|+++ +.|+.|++|+...
T Consensus 242 iw~~~~~~~~~~~~~~~~~--~~~~v~~v~~sp~g~~las~-~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 242 IWTCDDASSNTWSPKLLHK--FNDVVWHVSWSITANILAVS-GGDNKVTLWKESV 293 (316)
T ss_dssp EEECSSTTCCCCBCCEEEE--CSSCEEEEEECTTTCCEEEE-ESSSCEEEEEECT
T ss_pred EEEccCccccchhhhhhhc--CCCcEEEEEEcCCCCEEEEE-cCCCeEEEEEECC
Confidence 99997631 1223333 67889999999999999998 8999999999753
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-36 Score=278.14 Aligned_cols=248 Identities=17% Similarity=0.323 Sum_probs=211.9
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---CccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCC
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSS---LEHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIED 262 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~ 262 (454)
+|...|.+++|+|++++|++|+.||.|+||++. ...+..+.+|...|++++|+++ +.+|++|+.||.|++||+.+
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEET
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC
Confidence 688999999999999999999999999999983 3456678899999999999977 89999999999999999998
Q ss_pred ce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCe---EEEEccccCCeEEEEecC-----------
Q psy17902 263 RA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEES---QLVFNGHSRGIDMTRRVN----------- 324 (454)
Q Consensus 263 ~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~i~~~~~~~----------- 324 (454)
++ .+..+..|...|.+++|+|+ +.+|++++.|+.|++||+.... ...+..|...+.++.+.+
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 87 67777889999999999999 8999999999999999998873 336778888998888876
Q ss_pred ---CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC---CCEEEEecCCCcEEEEEcCCCc-
Q psy17902 325 ---DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN---SDLVASGSYDGCVKLWKITPKR- 397 (454)
Q Consensus 325 ---~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~v~iwd~~~~~- 397 (454)
+.+|++++.||.|++||++++.......... ..|...|.+++|+|+ +.+|++++.||.|++||+.++.
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~ 243 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-----EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 243 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE-----CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE-----ecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCc
Confidence 7899999999999999998765443222111 125566999999999 8999999999999999998864
Q ss_pred --eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 398 --TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 398 --~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
....+....+...|++++|+|+|++|+++ +.|+.|++|+...+
T Consensus 244 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~-~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 244 PWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENLE 288 (379)
T ss_dssp CCEEEESSSSCCSSCEEEEEECSSSCCEEEE-ESSSSEEEEEEEET
T ss_pred cceeeeeccccCCCcEEEEEEcCCCCEEEEe-cCCCcEEEEeCCCC
Confidence 23333434478889999999999999998 78999999998743
No 83
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4e-36 Score=303.11 Aligned_cols=250 Identities=16% Similarity=0.230 Sum_probs=207.7
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEeCC--CcEEEEec
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVANN--NELVASGD 209 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~ 209 (454)
..+.+ |.+.|++++|+|++++|++|+.||.|++|++.+. .....+. +|..+|.+++|+++ +++|++|+
T Consensus 3 ~~l~g--H~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~------~h~~~V~~l~~s~~~~~~~l~s~s 74 (753)
T 3jro_A 3 VIANA--HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT------GHEGPVWRVDWAHPKFGTILASCS 74 (753)
T ss_dssp -------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC------CCSSCEEEEEECCTTSCSEEEEEE
T ss_pred eeccc--CcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc------CCcCceEEEEecCCCCCCEEEEEe
Confidence 45677 9999999999999999999999999999999843 3333333 68899999999988 99999999
Q ss_pred CCCcEEEEeC-CCc--cEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCce--eEEEeeccCCceeEEEee
Q psy17902 210 NNSNIKLWSS-SLE--HLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDIL 282 (454)
Q Consensus 210 ~dg~v~vw~~-~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~v~~~~~~ 282 (454)
.||.|++||+ .+. .+..+..|...|++++|+|+ +++|++|+.||.|++||+.++. ....+.+|...|.+++|+
T Consensus 75 ~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~ 154 (753)
T 3jro_A 75 YDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 154 (753)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEEC
T ss_pred CCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEec
Confidence 9999999999 443 67778889999999999999 9999999999999999998773 344567899999999999
Q ss_pred c-------------CCCEEEEeeCCCcEEEeeccCCe----EE-EEccccCCeEEEEecC----CCEEEEEeCCCCEEEE
Q psy17902 283 A-------------KNRVISSGGTDKSVRVWKIQEES----QL-VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSLW 340 (454)
Q Consensus 283 ~-------------~~~~l~~~~~dg~i~i~d~~~~~----~~-~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~iw 340 (454)
| ++.+|++|+.||.|++||++++. .. .+.+|...+.++.+.+ +.+|++++.||.|++|
T Consensus 155 p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iw 234 (753)
T 3jro_A 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIW 234 (753)
T ss_dssp CCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEE
T ss_pred CcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEe
Confidence 9 58999999999999999998763 22 6778899998888775 4689999999999999
Q ss_pred ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
|+.++.......... ...+...|++++|+|+|.+|++|+.||.|++|++..
T Consensus 235 d~~~~~~~~~~~~~~----~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 235 TQDNEQGPWKKTLLK----EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EESSSSSCCBCCBSS----SSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cCCCCCCcceeEEec----cCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 998864322221111 123566699999999999999999999999999874
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=279.93 Aligned_cols=295 Identities=12% Similarity=0.098 Sum_probs=232.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc---eecccCCcc----------------------------------
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRS---KVCSSPFVK---------------------------------- 184 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~---------------------------------- 184 (454)
..+|.+++|+|+|++|+++ .++.|++||+.+++ .+..+....
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 4578999999999976665 57899999999887 433322100
Q ss_pred --------------cCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeCC---CccEEeec--ccCCCeEEEEEcCCCC
Q psy17902 185 --------------TDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSSS---LEHLHTFT--GHKAPITGLAISFECD 244 (454)
Q Consensus 185 --------------~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~~---~~~~~~~~--~~~~~v~~~~~~~~~~ 244 (454)
....|...|.+++|+|++++| ++|+.||.|+||++. +..+..+. .|...|++++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 001344579999999999996 899999999999985 45566665 5778999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCceeEE----EeeccCCceeEEEeecC---CCEEEEeeCCCcEEEeeccCCeEE-E-EccccC
Q psy17902 245 TLYSSSNDRSIKVWNIEDRAYVE----TLFGHQSAITSLDILAK---NRVISSGGTDKSVRVWKIQEESQL-V-FNGHSR 315 (454)
Q Consensus 245 ~l~~~~~dg~i~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~-~-~~~~~~ 315 (454)
+|++|+.+|.|++|++.++.... .+.+|...|++++|+|+ +++|++|+.|+.|++||++++..+ . +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999998876544 67789999999999999 999999999999999999988766 3 558888
Q ss_pred CeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCC----------------CCCCCCCCcEEEEEEecCCCEE
Q psy17902 316 GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY----------------DSSSSEPNWITSVACLHNSDLV 379 (454)
Q Consensus 316 ~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------~~~~~~~~~i~~~~~s~~~~~l 379 (454)
.+.++.+.++.+|++++.|+.|++||+.+++.+..+...... .........|.+++|+|++++|
T Consensus 243 ~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 243 FVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp CEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred ceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 998888777789999999999999999999888877643200 0000223459999999999999
Q ss_pred EEec-CCCcEEEEEc--CCC---ceeeEeccCCCceeeeEEEEcCCCCEEEEEecC------CCceeeeeeeCC
Q psy17902 380 ASGS-YDGCVKLWKI--TPK---RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT------EHRFGRWKTIKG 441 (454)
Q Consensus 380 ~~~~-~dg~v~iwd~--~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~------d~~i~~W~~~~~ 441 (454)
++++ .++.|++|++ ..+ ..+..+.. + +.|.+++|+|++ .+++..+. +..|.+|.....
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~--~-~~v~~~~~~~~~-~~v~~~~~~~~~~~~~~i~v~~~~~~ 392 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIITF--P-YNVISLSAHNDE-FQVTLDNKESSGVQKNFAKFIEYNLN 392 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEEC--S-SCEEEEEEETTE-EEEEECCTTCCSSCCCSEEEEEEETT
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEecc--C-CceEEEEecCCc-EEEEEecccCCCCCCcceEEEEEEcC
Confidence 9998 8999999999 555 44555554 3 789999999954 45544232 455788887654
No 85
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-36 Score=278.33 Aligned_cols=293 Identities=10% Similarity=0.073 Sum_probs=224.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecc------------------cCCc------ccCCCCCCceEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS------------------SPFV------KTDRKSYPPILAL 196 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~------------------~~~~------~~~~~~~~~v~~~ 196 (454)
-...|.+++|+|||+++|+++.|++|+ |....+.+.. +... .....+...|.++
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~v 91 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVC 91 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEE
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEE
Confidence 667899999999999999999999996 5443332100 0000 0011346789999
Q ss_pred EEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCC-----CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-------
Q psy17902 197 AVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKA-----PITGLAISFECDTLYSSSNDRSIKVWNIEDRA------- 264 (454)
Q Consensus 197 ~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~------- 264 (454)
+|+|+|.+||+++.||.|++|+..+ .+..+. |.. .|.+++|+|+|++|++|+.||+|++||+.++.
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i 169 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFY 169 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCE
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccce
Confidence 9999999999999999999999754 566666 665 49999999999999999999999999999875
Q ss_pred eEEEe----eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE----EE-ccccCCeEEEEecCCCEEEEEeCCC
Q psy17902 265 YVETL----FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL----VF-NGHSRGIDMTRRVNDQQFITCGEDG 335 (454)
Q Consensus 265 ~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~----~~-~~~~~~i~~~~~~~~~~l~~~~~dg 335 (454)
.+.++ .+|...|.+++|+|+| +++++.|++|++||+..+... .+ .+|...|..+.|. ++.+++++ ++
T Consensus 170 ~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs-g~~LASa~-~~ 245 (588)
T 2j04_A 170 FESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV-DYKVVLTC-PG 245 (588)
T ss_dssp EEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-TTEEEEEC-SS
T ss_pred eeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-CCEEEEEe-CC
Confidence 25665 5677899999999999 778899999999999887742 34 4677788888887 78888887 69
Q ss_pred CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE--ecCCCEEEEecCCCcEEEEEcCC-----C-ce-------ee
Q psy17902 336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC--LHNSDLVASGSYDGCVKLWKITP-----K-RT-------LE 400 (454)
Q Consensus 336 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--s~~~~~l~~~~~dg~v~iwd~~~-----~-~~-------~~ 400 (454)
.|++||+.++........ |...+..++| +|++..|++++.||+ ++|.... . .. +.
T Consensus 246 tIkLWd~~~~~~~~~~~g---------h~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~ 315 (588)
T 2j04_A 246 YVHKIDLKNYSISSLKTG---------SLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFK 315 (588)
T ss_dssp EEEEEETTTTEEEEEECS---------CCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHH
T ss_pred eEEEEECCCCeEEEEEcC---------CCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEE
Confidence 999999988766332211 4555999999 999999999999999 9998631 1 00 00
Q ss_pred -------EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEEEEe
Q psy17902 401 -------FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDI 451 (454)
Q Consensus 401 -------~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~~ 451 (454)
.+....+...|++++|||||+.+|++..-+..+.-+.......-.+.+++|
T Consensus 316 lW~~~g~~l~~~~~~~~I~~va~SPdG~~lA~~~~i~~~~~~y~i~s~~~~~i~f~pL 373 (588)
T 2j04_A 316 KWSTIWNEFNNYETTLVIHGISLSPDGYSIAIVYDMERVAFKYKIASEQSFNIMFAPL 373 (588)
T ss_dssp HTTTTTTSSSSSCCEEEEEEEEECTTSSEEEEEEEEECSSCCCCCSSSCCEEEEEEES
T ss_pred EEECCCCceeeeccceEEEEEEECCCCCEEEEEEeccCceeEEeeccceEEEEEEEEc
Confidence 011222455699999999999999986666555666666666666666665
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=7.4e-35 Score=274.68 Aligned_cols=252 Identities=16% Similarity=0.286 Sum_probs=210.3
Q ss_pred EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902 135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI 214 (454)
Q Consensus 135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v 214 (454)
.+....|...|+||+|+|+|++||+|+.||.|+|||+.+++.+..+. +|...+.+++++ +.+|++|+.|+.+
T Consensus 140 ~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~------~h~~~v~~~s~~--~~~l~sgs~d~~i 211 (420)
T 4gga_A 140 LLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT------SHSARVGSLSWN--SYILSSGSRSGHI 211 (420)
T ss_dssp EEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC------CCSSCEEEEEEE--TTEEEEEETTSEE
T ss_pred EEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe------CCCCceEEEeeC--CCEEEEEeCCCce
Confidence 33333399999999999999999999999999999999998877765 688889888775 6799999999999
Q ss_pred EEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce----eEEEeeccCCceeEEEeecCC-CE
Q psy17902 215 KLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA----YVETLFGHQSAITSLDILAKN-RV 287 (454)
Q Consensus 215 ~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~v~~~~~~~~~-~~ 287 (454)
++|+. ....+..+.+|...+..+.|+|++.++++++.|+.|++|++.+++ .+.....|...|.+++|+|.+ .+
T Consensus 212 ~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 212 HHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp EEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred eEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence 99998 456677889999999999999999999999999999999998764 345667899999999999976 45
Q ss_pred EEE--eeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEe--CCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902 288 ISS--GGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCG--EDGTLSLWSILKKVPTHTIPVAHGYDSSSS 362 (454)
Q Consensus 288 l~~--~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 362 (454)
+++ |+.|++|++||+.++... .+..+...+..++.+++..+++++ .|+.|+|||+.++.++..+..
T Consensus 292 la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g--------- 362 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG--------- 362 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC---------
T ss_pred EEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC---------
Confidence 554 457999999999999888 444455555566666778887765 789999999999999888753
Q ss_pred CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902 363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 403 (454)
|...|++++|+|+|.+|++|+.||+|+|||+....+.....
T Consensus 363 H~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~ 403 (420)
T 4gga_A 363 HTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRRE 403 (420)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----
T ss_pred CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhh
Confidence 55669999999999999999999999999998765554443
No 87
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.2e-35 Score=272.35 Aligned_cols=248 Identities=15% Similarity=0.274 Sum_probs=209.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
|...|++++|+|++++|++|+.||.|++||+.++.....+. .|...|.+++|+ +.+|++|+.||.|++||+.
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~ 204 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMA------GHQARVGCLSWN--RHVLSSGSRSGAIHHHDVR 204 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC------CCSSCEEEEEEE--TTEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEec------CCCCceEEEEEC--CCEEEEEcCCCCEEEEecc
Confidence 89999999999999999999999999999999988777665 588899999994 5799999999999999993
Q ss_pred --CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-CEEEEee--CCC
Q psy17902 221 --LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGG--TDK 295 (454)
Q Consensus 221 --~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~--~dg 295 (454)
...+..+..|...|.+++|+|++.+|++|+.||.|++||+.++..+..+..|...|.+++|+|++ .++++++ .|+
T Consensus 205 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 205 IANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp SSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred cCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 56678889999999999999999999999999999999999999998998999999999999977 5666654 799
Q ss_pred cEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEE--eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902 296 SVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITC--GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372 (454)
Q Consensus 296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 372 (454)
.|++||+.++.......+...+..+.+. ++..++++ +.||.|++||+.++......... .|...|.+++|
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-------~h~~~v~~~~~ 357 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-------AHDTRVLYSAL 357 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEE-------CCSSCCCEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEec-------CCCCCEEEEEE
Confidence 9999999999888555666777777765 56677774 48999999999887655544322 14556999999
Q ss_pred ecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902 373 LHNSDLVASGSYDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 373 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 403 (454)
+|++.+|++++.||.|++|++.+++.+....
T Consensus 358 s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 358 SPDGRILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp CTTSSEEEEECTTSEEEEEECCC--------
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccccccc
Confidence 9999999999999999999999887665543
No 88
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=291.34 Aligned_cols=260 Identities=14% Similarity=0.065 Sum_probs=201.3
Q ss_pred CCCCeEEEEEcCCC---------CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 141 HRASITCIAVTSDS---------KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 141 h~~~V~~~~~s~~~---------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
+.+.|.+|+|+|++ ++||+|+.++.. . ..+|++..|++++.|
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~--------------~---------------~~~~~~~~laS~s~D 182 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD--------------E---------------PLNEHLEMFDKEKHS 182 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------------C
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccC--------------C---------------ccchhhhhhccCCCC
Confidence 67889999999987 799999876420 0 126889999999999
Q ss_pred CcEEEEeCC-Ccc----EEeecccCCCeEEEEEcCC------CCEEEEEeCCCcEEEEeCCCcee-----------EEEe
Q psy17902 212 SNIKLWSSS-LEH----LHTFTGHKAPITGLAISFE------CDTLYSSSNDRSIKVWNIEDRAY-----------VETL 269 (454)
Q Consensus 212 g~v~vw~~~-~~~----~~~~~~~~~~v~~~~~~~~------~~~l~~~~~dg~i~iwd~~~~~~-----------~~~~ 269 (454)
++|+||++. +.. ...+..|.+.|.+++|+|+ +.+|++++.||+|++||+.++.. ...+
T Consensus 183 ~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l 262 (524)
T 2j04_B 183 SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTL 262 (524)
T ss_dssp EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEE
T ss_pred ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEE
Confidence 999999993 332 2345678899999999996 57999999999999999986632 2356
Q ss_pred eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE--EEccccCCeEEE--EecC-C-CEEEEEeCCCCEEEEecC
Q psy17902 270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL--VFNGHSRGIDMT--RRVN-D-QQFITCGEDGTLSLWSIL 343 (454)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~i~~~--~~~~-~-~~l~~~~~dg~i~iwd~~ 343 (454)
.+|...|++++|+++ ..|++|+.||+|++||++++... .+.+|...|.++ .+++ + .+|++++.|++|+|||++
T Consensus 263 ~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 263 SLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp CCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred EcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 789999999999986 48999999999999999976432 578899999888 4555 4 689999999999999999
Q ss_pred CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902 344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL 423 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l 423 (454)
++++...+..... ...|.+++|+|++..|++++.|++|++||+.++..+..+.. |.+.|++|+|||+|++|
T Consensus 342 ~~~~~~~~~~~~~-------~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~~l 412 (524)
T 2j04_B 342 DIATTKTTVSRFR-------GSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVS--RETTITAIGVSRLHPMV 412 (524)
T ss_dssp GHHHHCEEEEECS-------CCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEE--CSSCEEEEECCSSCCBC
T ss_pred CCCcccccccccc-------cCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeec--CCCceEEEEeCCCCCeE
Confidence 8887766643221 11278899999999999999999999999999888777776 88999999999999999
Q ss_pred EEEecCCCceeeeeeeC
Q psy17902 424 VAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 424 ~~~~~~d~~i~~W~~~~ 440 (454)
++| +.|+.|++|+...
T Consensus 413 ~Sg-s~Dgtv~lwd~~~ 428 (524)
T 2j04_B 413 LAG-SADGSLIITNAAR 428 (524)
T ss_dssp EEE-ETTTEEECCBSCS
T ss_pred EEE-ECCCEEEEEechH
Confidence 988 8999999999654
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.6e-34 Score=295.60 Aligned_cols=288 Identities=19% Similarity=0.252 Sum_probs=242.1
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |.+.|++++|+|++++|++|+.||.|++||+.++.....+. +|...|.+++|+|++.+|++++.|
T Consensus 47 ~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~d 118 (814)
T 3mkq_A 47 EVRSIQV--TETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE------AHPDYIRSIAVHPTKPYVLSGSDD 118 (814)
T ss_dssp EEEEEEC--CSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE------CCSSCEEEEEECSSSSEEEEEETT
T ss_pred eEEEEec--CCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe------cCCCCEEEEEEeCCCCEEEEEcCC
Confidence 5667778 99999999999999999999999999999999988777665 588899999999999999999999
Q ss_pred CcEEEEeC-CC-ccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeeccC-CceeEEEeec--CC
Q psy17902 212 SNIKLWSS-SL-EHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ-SAITSLDILA--KN 285 (454)
Q Consensus 212 g~v~vw~~-~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~--~~ 285 (454)
|.|++|++ .+ .....+.+|...|.+++|+| ++..|++++.||.|++||+.++.....+..+. ..+.+++|+| ++
T Consensus 119 g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 119 LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK 198 (814)
T ss_dssp SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence 99999999 33 56678889999999999999 88999999999999999999887777766554 8899999999 89
Q ss_pred CEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
.+|++++.||.|++||+.++... .+.+|...+.++.+. ++.++++++.||.|++||+.++..+..+...
T Consensus 199 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~--------- 269 (814)
T 3mkq_A 199 PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG--------- 269 (814)
T ss_dssp CEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS---------
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC---------
Confidence 99999999999999999998877 677788888877766 4678999999999999999998888777643
Q ss_pred CCcEEEEEEecCCC--EEEEecCCCcEEEEEcCCCceeeEecc-------------------------------------
Q psy17902 364 PNWITSVACLHNSD--LVASGSYDGCVKLWKITPKRTLEFLQD------------------------------------- 404 (454)
Q Consensus 364 ~~~i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~~~~~~~~~~------------------------------------- 404 (454)
...+.+++|+|++. ++++++ ++.+.+|++..+.....+..
T Consensus 270 ~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (814)
T 3mkq_A 270 LERSWCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQ 348 (814)
T ss_dssp SSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCC
T ss_pred CCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceee
Confidence 34499999999987 455555 66689998765422211110
Q ss_pred ----CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 405 ----IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 405 ----~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
..+...+.+++|+|+|++|+++ + ++.+.+|+..
T Consensus 349 ~~~~~~~~~~~~~~~~spdg~~la~~-~-~~~~~i~~~~ 385 (814)
T 3mkq_A 349 TKELGSVDVFPQSLAHSPNGRFVTVV-G-DGEYVIYTAL 385 (814)
T ss_dssp CEEECCCSSCCSEEEECTTSSEEEEE-E-TTEEEEEETT
T ss_pred eecCCCCccCCceeEECCCCCEEEEe-c-CCEEEEEECc
Confidence 1133457899999999999988 4 8999999854
No 90
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.3e-35 Score=271.45 Aligned_cols=241 Identities=15% Similarity=0.224 Sum_probs=199.2
Q ss_pred CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902 141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS 219 (454)
Q Consensus 141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~ 219 (454)
|.+.|.+++|+| ++++|++++.||.|++||+.+.. ...+. ....+...|.+++|+|++.+|++|+.||.|++||+
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 192 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFA---KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL 192 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEE---CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred cCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEe---ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC
Confidence 999999999999 78999999999999999998633 22221 11235578999999999999999999999999999
Q ss_pred CCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCC----ceeEEEeeccCCceeEEEeec-CCCEEEEeeC
Q psy17902 220 SLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIED----RAYVETLFGHQSAITSLDILA-KNRVISSGGT 293 (454)
Q Consensus 220 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~----~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 293 (454)
.+..+..+..|...|.+++|+|++. +|++++.|+.|++||+.+ +..+..+ +|...|++++|+| ++.+|++++.
T Consensus 193 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 193 DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 8889999999999999999999998 999999999999999987 5666666 7999999999999 9999999999
Q ss_pred CCcEEEeeccCCeEE-EEccc-------cCCeEE----------EEecCCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902 294 DKSVRVWKIQEESQL-VFNGH-------SRGIDM----------TRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH 355 (454)
Q Consensus 294 dg~i~i~d~~~~~~~-~~~~~-------~~~i~~----------~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 355 (454)
|+.|++||++++... .+..| ...+.+ +.+.+++.+ +++.||.|++||+.++..+..+....
T Consensus 272 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~ 350 (383)
T 3ei3_B 272 RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPN 350 (383)
T ss_dssp SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTT
T ss_pred CCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCC
Confidence 999999999987654 33332 222222 333333333 67789999999999999888876432
Q ss_pred CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
+...+.+++|+|++++|++|+ ||.|++||+.+
T Consensus 351 -------~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 351 -------AAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp -------BCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred -------CCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 234478889999999999997 99999999864
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=3.4e-35 Score=271.71 Aligned_cols=251 Identities=16% Similarity=0.205 Sum_probs=206.7
Q ss_pred EeEeccCCCCCCeEEEEEcCC----CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEE
Q psy17902 133 CTKFNGKPHRASITCIAVTSD----SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVAS 207 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 207 (454)
...+....|...|++++|+|+ +++|++|+.||.|++||+.++.....+. +|...|.+++|+| ++.+|++
T Consensus 60 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~------~~~~~i~~~~~~~~~~~~l~s 133 (366)
T 3k26_A 60 LQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYV------GHGNAINELKFHPRDPNLLLS 133 (366)
T ss_dssp EEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEE------SCCSCEEEEEECSSCTTEEEE
T ss_pred eeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeec------CCCCcEEEEEECCCCCCEEEE
Confidence 333343348899999999998 6799999999999999999888776654 5888999999999 9999999
Q ss_pred ecCCCcEEEEeC-CCccEEee---cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-------------
Q psy17902 208 GDNNSNIKLWSS-SLEHLHTF---TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF------------- 270 (454)
Q Consensus 208 ~~~dg~v~vw~~-~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~------------- 270 (454)
|+.||.|++||+ .+..+..+ ..|...|.+++|+|++.+|++++.||.|++||+.+++.+..+.
T Consensus 134 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (366)
T 3k26_A 134 VSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRP 213 (366)
T ss_dssp EETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSC
T ss_pred EeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccc
Confidence 999999999999 56666666 6899999999999999999999999999999999876543333
Q ss_pred ---------------ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE--------------E-EEccccCCeEEE
Q psy17902 271 ---------------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ--------------L-VFNGHSRGIDMT 320 (454)
Q Consensus 271 ---------------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--------------~-~~~~~~~~i~~~ 320 (454)
.|...|.+++|+ +++|++++.|+.|++||+.+... + .+..|...+.++
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 291 (366)
T 3k26_A 214 FISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYM 291 (366)
T ss_dssp CCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCC
T ss_pred ccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEE
Confidence 399999999998 77999999999999999987643 2 566677777666
Q ss_pred Eec-C--CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902 321 RRV-N--DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT 394 (454)
Q Consensus 321 ~~~-~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~ 394 (454)
.+. + +.+|++++.||.|++||+.++.+.......... ..+...|++++|+|++++|++++.||.|++||+.
T Consensus 292 ~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 292 RFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTH---HKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECC---TTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcc---cccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 554 4 688999999999999999988765421111000 0125669999999999999999999999999985
No 92
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=8.4e-35 Score=272.35 Aligned_cols=256 Identities=11% Similarity=0.129 Sum_probs=215.8
Q ss_pred eEeEeccCCCCCCeEEEEEcCC----C---CEEEEEeCCCeEEEEEcCCCce-----ecccCCcccCCCC-----CCceE
Q psy17902 132 VCTKFNGKPHRASITCIAVTSD----S---KHVYSACKDGIIIKWLLETRSK-----VCSSPFVKTDRKS-----YPPIL 194 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~----~---~~l~~~~~dg~i~iwd~~~~~~-----~~~~~~~~~~~~~-----~~~v~ 194 (454)
....+.+ |...|++++|+|+ + ++|++++.||.|++|++.++.. ...+. .| ...|.
T Consensus 54 ~~~~~~~--h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~------~~~~~~~~~~v~ 125 (397)
T 1sq9_A 54 KSYSHFV--HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLD------LLDSDMKKHSFW 125 (397)
T ss_dssp GEEEEEC--CTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEEC------CSCTTGGGSCEE
T ss_pred cceEEec--CCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeec------ccccccCCCcEE
Confidence 4666778 9999999999999 9 9999999999999999988775 44433 35 57999
Q ss_pred EEEEe----CCCcE-EEEecCCCcEEEEeC-C------CccEE-----ee-------cccCCCeEEEEEcCCCCEEEEEe
Q psy17902 195 ALAVA----NNNEL-VASGDNNSNIKLWSS-S------LEHLH-----TF-------TGHKAPITGLAISFECDTLYSSS 250 (454)
Q Consensus 195 ~~~~~----~~~~~-l~~~~~dg~v~vw~~-~------~~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~ 250 (454)
+++|+ |++.+ |++++.||.|++||+ . ...+. .+ ..|...|.+++|+|++ +|++++
T Consensus 126 ~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~ 204 (397)
T 1sq9_A 126 ALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF 204 (397)
T ss_dssp EEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC
T ss_pred EEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe
Confidence 99999 99999 999999999999999 4 45555 66 4589999999999999 999999
Q ss_pred CCCcEEEEeCCCceeEEEeec---c---CCceeEEEeecCCCEEEEeeCC---CcEEEeeccCCeEE-EEcc--------
Q psy17902 251 NDRSIKVWNIEDRAYVETLFG---H---QSAITSLDILAKNRVISSGGTD---KSVRVWKIQEESQL-VFNG-------- 312 (454)
Q Consensus 251 ~dg~i~iwd~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~-~~~~-------- 312 (454)
.||.|++||+.+++.+..+.. | ...|.+++|+|++.+|++++.| +.|++||+++++.+ .+..
T Consensus 205 ~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~ 284 (397)
T 1sq9_A 205 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 284 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccccc
Confidence 999999999999999999988 8 9999999999999999999999 99999999988877 6666
Q ss_pred -----ccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCC------------CCCCCCCCcEEEEEEec
Q psy17902 313 -----HSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY------------DSSSSEPNWITSVACLH 374 (454)
Q Consensus 313 -----~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~~~~~~i~~~~~s~ 374 (454)
|...+.++.+. ++.+|++++.||.|++||+.+++.+..+...... .....|...|++++|+|
T Consensus 285 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~ 364 (397)
T 1sq9_A 285 LGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLK 364 (397)
T ss_dssp -CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEEC
T ss_pred ccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecc
Confidence 88888887776 5779999999999999999999988888721100 00011266799999999
Q ss_pred CC----------CEEEEecCCCcEEEEEcCCC
Q psy17902 375 NS----------DLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 375 ~~----------~~l~~~~~dg~v~iwd~~~~ 396 (454)
++ ++|++|+.||.|++|++.++
T Consensus 365 ~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 365 KGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred ccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 98 79999999999999999876
No 93
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.3e-35 Score=281.02 Aligned_cols=252 Identities=17% Similarity=0.185 Sum_probs=198.4
Q ss_pred eEeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 132 VCTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
....+.+ |.+.|++|+|+| ++++|++|+.||+|++||+.+........ ...+...+.+++|+|++.+|++|+.
T Consensus 156 ~~~~~~g--H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~g~~ 229 (435)
T 4e54_B 156 TFIKGIG--AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFAS----SDTINIWFCSLDVSASSRMVVTGDN 229 (435)
T ss_dssp EEECCCS--SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEEC----CSSCSCCCCCEEEETTTTEEEEECS
T ss_pred eEEEccC--CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEec----cCCCCccEEEEEECCCCCEEEEEeC
Confidence 3445667 999999999998 68999999999999999998654332211 1134456889999999999999999
Q ss_pred CCcEEEEeCCCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEE---eeccCCceeEEEeecCCC
Q psy17902 211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVET---LFGHQSAITSLDILAKNR 286 (454)
Q Consensus 211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~~~~~~~ 286 (454)
||.|++||+.+..+..+.+|...|++++|+|++. +|++|+.|+.|++||+++...... ..+|...|++++|+|++.
T Consensus 230 dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~ 309 (435)
T 4e54_B 230 VGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA 309 (435)
T ss_dssp SSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS
T ss_pred CCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC
Confidence 9999999998888889999999999999999876 788999999999999987764433 357999999999999999
Q ss_pred EEEEeeCCCcEEEeeccCCeEE-EEcccc-------CCeEEEEecCCCEEEEEe------------CCCCEEEEecCCCc
Q psy17902 287 VISSGGTDKSVRVWKIQEESQL-VFNGHS-------RGIDMTRRVNDQQFITCG------------EDGTLSLWSILKKV 346 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-------~~i~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~ 346 (454)
+|++++.||.|++||+.++... .+..|. ..+...+.+.+..+++++ .++.|++||..++.
T Consensus 310 ~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 310 RLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp EEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred eeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 9999999999999999987655 333332 123344444555555543 34679999999998
Q ss_pred cceeeecccCCCCCCCCCCcEEEE-EEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902 347 PTHTIPVAHGYDSSSSEPNWITSV-ACLHNSDLVASGSYDGCVKLWKITPKRT 398 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~dg~v~iwd~~~~~~ 398 (454)
.+..+...+ ...|.++ +|+|+|.+|++|+ |++|+||++.+++.
T Consensus 390 ~~~~l~~~~--------~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 390 MMCQLYDPE--------SSGISSLNEFNPMGDTLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EEEEECCSS--------CCCCCCEEEECTTSSCEEEEC-SSEEEECCCC----
T ss_pred EEEEEeCCC--------CCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcCee
Confidence 887765333 3347776 6999999999886 78999999988754
No 94
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.3e-34 Score=266.87 Aligned_cols=260 Identities=12% Similarity=0.122 Sum_probs=212.6
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |...|++++|+|++++|++++.||.|++||+.++........ ..|...|.+++|+|++++|++++.+
T Consensus 44 ~~~~~~~--h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d 117 (372)
T 1k8k_C 44 QVHELKE--HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVI----LRINRAARCVRWAPNEKKFAVGSGS 117 (372)
T ss_dssp EEEEEEC--CSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEEC----CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeeecC--CCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEe----ecCCCceeEEEECCCCCEEEEEeCC
Confidence 5677788 999999999999999999999999999999988764333211 1477899999999999999999999
Q ss_pred CcEEEEeC-CCcc---E-EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC------------------CCceeEEE
Q psy17902 212 SNIKLWSS-SLEH---L-HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI------------------EDRAYVET 268 (454)
Q Consensus 212 g~v~vw~~-~~~~---~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~------------------~~~~~~~~ 268 (454)
|.|++|++ .... . .....|...|.+++|+|++++|++++.||.|++||+ ..+..+..
T Consensus 118 ~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (372)
T 1k8k_C 118 RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE 197 (372)
T ss_dssp SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE
T ss_pred CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEe
Confidence 99999999 3332 2 333678999999999999999999999999999995 46788888
Q ss_pred eeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC--C
Q psy17902 269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK--K 345 (454)
Q Consensus 269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~--~ 345 (454)
+.+|...|.+++|+|++++|++++.|+.|++||+++++.+ .+..|...+.++.+.+++.+++++.|+.|++|++.. +
T Consensus 198 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~ 277 (372)
T 1k8k_C 198 SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAG 277 (372)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTT
T ss_pred cCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCc
Confidence 8899999999999999999999999999999999988877 777888888888887666666666999999999987 4
Q ss_pred c--cceeeec----------------------ccC------CCCCCCCCCcEEEEEEe-cCC---CEEEEecCCCcEEEE
Q psy17902 346 V--PTHTIPV----------------------AHG------YDSSSSEPNWITSVACL-HNS---DLVASGSYDGCVKLW 391 (454)
Q Consensus 346 ~--~~~~~~~----------------------~~~------~~~~~~~~~~i~~~~~s-~~~---~~l~~~~~dg~v~iw 391 (454)
. .+..+.. ... ......|...|++++|+ ++| .+|++|+.||.|++|
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W 357 (372)
T 1k8k_C 278 KLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 357 (372)
T ss_dssp EEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEE
T ss_pred eEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEE
Confidence 2 1111100 000 11113577889999976 566 899999999999999
Q ss_pred EcCCCc
Q psy17902 392 KITPKR 397 (454)
Q Consensus 392 d~~~~~ 397 (454)
++.+++
T Consensus 358 ~~~~~~ 363 (372)
T 1k8k_C 358 DVRSLE 363 (372)
T ss_dssp EHHHHH
T ss_pred EecChh
Confidence 997653
No 95
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.1e-34 Score=271.08 Aligned_cols=241 Identities=15% Similarity=0.278 Sum_probs=203.2
Q ss_pred CCCCceEEEEEeCC-CcEEEEecCCCcEEEEeC-C----------CccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCc
Q psy17902 188 KSYPPILALAVANN-NELVASGDNNSNIKLWSS-S----------LEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRS 254 (454)
Q Consensus 188 ~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~-~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~ 254 (454)
.|...|++++|+|+ +.+|++++.+|.|++|++ . ...+..+.+|...|++++|+|++. +|++|+.||.
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 57889999999997 789999999999999998 3 467788899999999999999988 9999999999
Q ss_pred EEEEeCCCcee-------EEEeeccCCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCe---EE-EEccccCCeEEEEe
Q psy17902 255 IKVWNIEDRAY-------VETLFGHQSAITSLDILA-KNRVISSGGTDKSVRVWKIQEES---QL-VFNGHSRGIDMTRR 322 (454)
Q Consensus 255 i~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~---~~-~~~~~~~~i~~~~~ 322 (454)
|++|++..+.. ...+.+|...|.+++|+| ++.+|++++.||.|++||+++.. .. .+..|...+.++.+
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~ 285 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSF 285 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEE
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEe
Confidence 99999987321 345668999999999999 67899999999999999999762 33 66788899988888
Q ss_pred cC-CC-EEEEEeCCCCEEEEecCC-CccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC--
Q psy17902 323 VN-DQ-QFITCGEDGTLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK-- 396 (454)
Q Consensus 323 ~~-~~-~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~-- 396 (454)
.+ +. .|++|+.||.|++||+++ ..++..+.. |...|++++|+|++. +|++++.||.|+|||+...
T Consensus 286 ~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~---------h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~ 356 (430)
T 2xyi_A 286 NPYSEFILATGSADKTVALWDLRNLKLKLHSFES---------HKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE 356 (430)
T ss_dssp CSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEC---------CSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTC
T ss_pred CCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeec---------CCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcc
Confidence 76 33 688999999999999988 455666653 345599999999985 7999999999999999872
Q ss_pred ------------ceeeEeccCCCceeeeEEEEcCCCC-EEEEEecCCCceeeeeeeC
Q psy17902 397 ------------RTLEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 397 ------------~~~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d~~i~~W~~~~ 440 (454)
..+..+.. |...|++++|+|+++ +|+++ +.|+.|++|+...
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~-s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 357 EQSTEDAEDGPPELLFIHGG--HTAKISDFSWNPNEPWIICSV-SEDNIMQVWQMAE 410 (430)
T ss_dssp CCCHHHHHHCCTTEEEECCC--CSSCEEEEEECSSSTTEEEEE-ETTSEEEEEEECH
T ss_pred ccCccccccCCcceEEEcCC--CCCCceEEEECCCCCCEEEEE-ECCCCEEEeEccc
Confidence 34444443 788899999999999 55555 8999999999754
No 96
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.4e-34 Score=263.84 Aligned_cols=249 Identities=15% Similarity=0.158 Sum_probs=216.8
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |.+.|++++|+|++++|++++.||.|++||+.++.....+. +...|.+++|+|++.+|++++.+
T Consensus 66 ~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 66 RLGTLDG--HTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK-------SPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEEECC--CSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE-------CSSCEEEEEECTTSSEEEEEECC
T ss_pred hhhhhhh--cCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee-------cCCCeEEEEEccCCCEEEEecCC
Confidence 5667788 99999999999999999999999999999999988776654 56689999999999999999998
Q ss_pred -----CcEEEEeC-CC-----------ccEEeecccCC--CeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-ceeEEEeec
Q psy17902 212 -----SNIKLWSS-SL-----------EHLHTFTGHKA--PITGLAISFECDTLYSSSNDRSIKVWNIED-RAYVETLFG 271 (454)
Q Consensus 212 -----g~v~vw~~-~~-----------~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~ 271 (454)
|.|.+|++ .. ..+..+..|.. .+.+++|+|++++|++++.||.|++||+.+ ...+..+..
T Consensus 137 ~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 137 VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC
T ss_pred ccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec
Confidence 99999998 22 13445556666 999999999999999999999999999998 788888889
Q ss_pred cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCC--------------C
Q psy17902 272 HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDG--------------T 336 (454)
Q Consensus 272 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg--------------~ 336 (454)
|...|.+++|+|++.+|++++.|+.|++||++++.......+...+..+.+. ++.++++++.++ .
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 296 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFE 296 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CE
T ss_pred CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcce
Confidence 9999999999999999999999999999999998888544566666665554 577888888888 8
Q ss_pred EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398 (454)
Q Consensus 337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~ 398 (454)
+++||+.++..+..+.. |...|++++|+|++++|++++.||.|++|++..+..
T Consensus 297 i~~~d~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 297 ARFYHKIFEEEIGRVQG---------HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp EEEEETTTCCEEEEEEC---------CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred eEEEecCCCcchhheec---------ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 99999999988887764 345599999999999999999999999999986543
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-35 Score=276.48 Aligned_cols=243 Identities=14% Similarity=0.129 Sum_probs=194.0
Q ss_pred CCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC--ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-
Q psy17902 189 SYPPILALAVANNNELVASGDNNSNIKLWSS-SL--EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA- 264 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~- 264 (454)
+..+|.+++|+|++++|++|+.||.|++|++ .+ ..+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 4568999999999999999999999999999 44 5677888999999999999999999999999999999999877
Q ss_pred --eEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE----EEEcc-ccCCeEEEEec-CCCEEEEEeCCCC
Q psy17902 265 --YVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ----LVFNG-HSRGIDMTRRV-NDQQFITCGEDGT 336 (454)
Q Consensus 265 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~-~~~~i~~~~~~-~~~~l~~~~~dg~ 336 (454)
....+.+|...|.+++|+|++++|++++.|+.|++||++++.. ..+.. |...+.++.+. ++.+|++++.|+.
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 6667788999999999999999999999999999999998763 35666 88889888776 4678999999999
Q ss_pred EEEEecCCCcccee------------eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce----ee
Q psy17902 337 LSLWSILKKVPTHT------------IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT----LE 400 (454)
Q Consensus 337 i~iwd~~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~ 400 (454)
|++||+........ ...... . .|...|++++|+|++++|++++.||.|++||+.++.. +.
T Consensus 170 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 245 (377)
T 3dwl_C 170 AYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE---Y-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALI 245 (377)
T ss_dssp EEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC---C-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECC
T ss_pred EEEEEEEecccCCCccccccccccchhhhhhc---c-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeE
Confidence 99999964321110 000000 0 3667799999999999999999999999999999876 66
Q ss_pred EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 401 FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 401 ~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
.+.. |..+|++++|+|++++|+++ ++++.+ +|+..
T Consensus 246 ~~~~--~~~~v~~~~~s~~~~~l~~~-~~~~~~-~~~~~ 280 (377)
T 3dwl_C 246 TVKL--SQLPLRSLLWANESAIVAAG-YNYSPI-LLQGN 280 (377)
T ss_dssp CEEC--SSSCEEEEEEEETTEEEEEE-SSSSEE-EECCC
T ss_pred eecC--CCCceEEEEEcCCCCEEEEE-cCCcEE-EEEeC
Confidence 6665 78899999999999988877 555555 77654
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=7.1e-34 Score=261.45 Aligned_cols=288 Identities=12% Similarity=0.129 Sum_probs=216.5
Q ss_pred EeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCc
Q psy17902 135 KFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSN 213 (454)
Q Consensus 135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~ 213 (454)
.+.+ |.+.|++++|+|+|++|++|+.+| +++|++.+........ ...+..+++.++++++ ++|+.++.
T Consensus 14 ~~~~--h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~~ 82 (355)
T 3vu4_A 14 PENH--VSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--------MRHLSKVRMLHRTNYVAFVTGVKEV 82 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--------CSCCCEEEECTTSSEEEEECSSTTE
T ss_pred cccc--CCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--------cCCeEEEEEcCCCCEEEEEECCccE
Confidence 3455 999999999999999999998775 7899988765544322 1247788888888877 56777899
Q ss_pred EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-eeEEEeeccCCceeEEEeecCCCEEEE-
Q psy17902 214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-AYVETLFGHQSAITSLDILAKNRVISS- 290 (454)
Q Consensus 214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~- 290 (454)
|++||+ ++..+..+. |...|.+++|+++. ++++ .++.|++||+.++ +.+..+.. +...+++++ .++++
T Consensus 83 v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~ 153 (355)
T 3vu4_A 83 VHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYS 153 (355)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEE
T ss_pred EEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEe
Confidence 999999 666666665 67799999998763 4444 4789999999988 66666544 444566666 55555
Q ss_pred -eeCCCcEEEeeccCCe-----------------EEEEccccCCeEEEEec-CCCEEEEEeCCCC-EEEEecCCCcccee
Q psy17902 291 -GGTDKSVRVWKIQEES-----------------QLVFNGHSRGIDMTRRV-NDQQFITCGEDGT-LSLWSILKKVPTHT 350 (454)
Q Consensus 291 -~~~dg~i~i~d~~~~~-----------------~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~-i~iwd~~~~~~~~~ 350 (454)
|+.+|.|++||+.++. ...+.+|...|.++.+. ++.+|++++.||+ |++||+.+++++..
T Consensus 154 sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 154 NEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp ESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 6899999999999865 45788999999888876 4678999999999 99999999999888
Q ss_pred eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce--eeEecc-------------------CCCce
Q psy17902 351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT--LEFLQD-------------------IPLSG 409 (454)
Q Consensus 351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~-------------------~~~~~ 409 (454)
+.... |...|.+++|+|++++|++++.|++|++||+..+.. ...+.. .....
T Consensus 234 ~~~g~-------h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (355)
T 3vu4_A 234 FRRGL-------DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHV 306 (355)
T ss_dssp EECTT-------CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTC
T ss_pred EEcCC-------CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCC
Confidence 86320 345599999999999999999999999999976521 111110 00122
Q ss_pred eeeEEEEcCCCCEEEEEecCCCceeeeeeeCCCeeEEEEEE
Q psy17902 410 VINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIID 450 (454)
Q Consensus 410 ~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~~~~~~~~ 450 (454)
....++|+|||++|+++ +.||.+.+|+...+......++.
T Consensus 307 ~~~~~a~~~d~~~l~~~-~~dg~~~~~~~~~~~~~~~~~~~ 346 (355)
T 3vu4_A 307 RGCKIAWISESSLVVVW-PHTRMIETFKVVFDDEMERWLIQ 346 (355)
T ss_dssp CCCEEEESSSSEEEEEE-TTTTEEEEEEEEEETTTTEEEEE
T ss_pred CceEEEEeCCCCEEEEE-eCCCeEEEEEEEcCCCCceEEEe
Confidence 34779999999999999 78999999998765544444443
No 99
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=268.47 Aligned_cols=278 Identities=17% Similarity=0.218 Sum_probs=202.0
Q ss_pred CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC---CcEEEEecCCCcEEE
Q psy17902 141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN---NELVASGDNNSNIKL 216 (454)
Q Consensus 141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~v~v 216 (454)
|...|++++|+| ++++|++++.||.|++||+.++.....+. +...+.++.|++. +.++++|+.+|.|++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 170 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-------FEETVYSHHMSPVSTKHCLVAVGTRGPKVQL 170 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-------CSSCEEEEEECSSCSSCCEEEEEESSSSEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-------CCCceeeeEeecCCCCCcEEEEEcCCCeEEE
Confidence 999999999999 78899999999999999999887766554 5568999999984 459999999999999
Q ss_pred EeC-CCccEEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCce-eEEEe---------------eccCCceeE
Q psy17902 217 WSS-SLEHLHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRA-YVETL---------------FGHQSAITS 278 (454)
Q Consensus 217 w~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~v~~ 278 (454)
||+ .+..+..+..|...|.+++|+|++. +|++|+.||.|++||++++. .+..+ ..|...|.+
T Consensus 171 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 250 (408)
T 4a11_B 171 CDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG 250 (408)
T ss_dssp EESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE
T ss_pred EeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeE
Confidence 999 6777888999999999999999998 58899999999999998765 33333 578899999
Q ss_pred EEeecCCCEEEEeeCCCcEEEeeccCCeEEE-Eccc-----cCCe-EEEEecCCCEEEEEeCCCCEEEEecCCCccceee
Q psy17902 279 LDILAKNRVISSGGTDKSVRVWKIQEESQLV-FNGH-----SRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351 (454)
Q Consensus 279 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~-----~~~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 351 (454)
++|+|++++|++++.||.|++||+.++.... ...+ ...+ ..........+++++.++.|++||+.++.++..+
T Consensus 251 ~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 251 LCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 9999999999999999999999999876551 1111 1112 2233345667888889999999999999988877
Q ss_pred ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902 352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 352 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
.. |...|++++|+|++++|++|+.||.|++|++.+++.+...... .....+.|....+.+..+.++
T Consensus 331 ~~---------~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 396 (408)
T 4a11_B 331 KG---------HYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDET-----TTKSQLNPAFEDAWSSSDEEG 396 (408)
T ss_dssp CC---------CSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------------------------------------
T ss_pred cc---------CCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCce-----EeccccccccceeecccCccC
Confidence 53 4455999999999999999999999999999988776554431 122345555555555558899
Q ss_pred ceeeeeee
Q psy17902 432 RFGRWKTI 439 (454)
Q Consensus 432 ~i~~W~~~ 439 (454)
.+.+|...
T Consensus 397 ~~~~W~~~ 404 (408)
T 4a11_B 397 GTSAWSHP 404 (408)
T ss_dssp --------
T ss_pred ceeecCCc
Confidence 99999764
No 100
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.7e-33 Score=265.31 Aligned_cols=282 Identities=13% Similarity=0.093 Sum_probs=233.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL 221 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~ 221 (454)
..+.+++|+|++.++++++.++.|++||+.+++........ ...+|...|.+++|++++.++++++.++.|++||+ .+
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPE-KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCH-HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcc-cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 44669999997778888888899999999988876543321 11257789999999999999999999999999999 66
Q ss_pred ccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee--------
Q psy17902 222 EHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG-------- 292 (454)
Q Consensus 222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------- 292 (454)
..+..+..|...+.+++|+|+++++++++ .++.|++||+.+++.+..+.. ...+.+++|+|++++|++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCcccc
Confidence 77788888999999999999999886555 799999999999988877765 45689999999999998887
Q ss_pred CCCcEEEeeccCCeEEEEccccCCeEEEEecC-CCE-EEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902 293 TDKSVRVWKIQEESQLVFNGHSRGIDMTRRVN-DQQ-FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV 370 (454)
Q Consensus 293 ~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~-~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 370 (454)
.|+.|++||+.+++......+...+..+.+.+ +.. +++++.++.|++||+.+++.+..+.. ...+.++
T Consensus 281 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~----------~~~~~~~ 350 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV----------FDKPNTI 350 (433)
T ss_dssp CCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC----------SSSEEEE
T ss_pred CCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC----------CCCCCeE
Confidence 48899999999988876555655666666654 544 45668999999999998888777652 2338999
Q ss_pred EEecCCCEEEEecC---------------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902 371 ACLHNSDLVASGSY---------------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 371 ~~s~~~~~l~~~~~---------------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~ 435 (454)
+|+|++++|++++. ||.|++||+.+++.+..+.. ...+.+++|+|+|++|+++++.|+.|++
T Consensus 351 ~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 351 ALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA---GNQPTGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp EECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC---CCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence 99999998888776 57999999999988877764 4568999999999999988567999999
Q ss_pred eeee
Q psy17902 436 WKTI 439 (454)
Q Consensus 436 W~~~ 439 (454)
|+..
T Consensus 428 ~~~~ 431 (433)
T 3bws_A 428 YRRD 431 (433)
T ss_dssp EEET
T ss_pred EEec
Confidence 9874
No 101
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-33 Score=251.40 Aligned_cols=251 Identities=20% Similarity=0.300 Sum_probs=213.8
Q ss_pred eeEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 131 ~~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
.....+.. |...|.+++|+|++++|++|+.||.|++|++......... .....|...|.+++| ++.+|++++.
T Consensus 50 ~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~--~~~~l~~~~~ 122 (313)
T 3odt_A 50 WLGTVVYT--GQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPL---YTLIGHQGNVCSLSF--QDGVVISGSW 122 (313)
T ss_dssp EEEEEEEE--CSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC----CEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred EEEEEeec--CCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcc---cchhhcccCEEEEEe--cCCEEEEEeC
Confidence 34566777 9999999999999999999999999999998765322111 112368889999999 5679999999
Q ss_pred CCcEEEEeCCCccEEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEeec-cCCceeEEEeecCCCEE
Q psy17902 211 NSNIKLWSSSLEHLHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLFG-HQSAITSLDILAKNRVI 288 (454)
Q Consensus 211 dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 288 (454)
||.|++|| ....+..+..|...+.+++|+| ++++|++++.||.|++|| ....+..+.. |...|.+++|+|++. +
T Consensus 123 d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~ 198 (313)
T 3odt_A 123 DKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-F 198 (313)
T ss_dssp TSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-E
T ss_pred CCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-E
Confidence 99999999 7777888899999999999988 899999999999999999 4556666666 999999999999988 8
Q ss_pred EEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902 289 SSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI 367 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i 367 (454)
++++.||.|++||++++..+ .+..|...+.++.+.+++.|++++.||.|++||+.+++.+..+..+ ...|
T Consensus 199 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~---------~~~i 269 (313)
T 3odt_A 199 ISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLP---------AISI 269 (313)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECS---------SSCE
T ss_pred EEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEecc---------CceE
Confidence 89999999999999988877 6778999999999887778999999999999999999888887643 3349
Q ss_pred EEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902 368 TSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 368 ~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 402 (454)
.+++|+|++. +++++.||.|++|++.+++.....
T Consensus 270 ~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 270 WSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp EEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred EEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 9999999998 567889999999999887655443
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-34 Score=264.37 Aligned_cols=269 Identities=12% Similarity=0.040 Sum_probs=211.1
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc------
Q psy17902 149 AVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE------ 222 (454)
Q Consensus 149 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~------ 222 (454)
.+.+++++|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|+.|++|+....
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~ 111 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDS 111 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEET
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeec
Confidence 345678899999999999999999887765543 235777788887 999999999999976422
Q ss_pred ----cEEee-cccCCCeEEEEEcC--CCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEEEeeCC
Q psy17902 223 ----HLHTF-TGHKAPITGLAISF--ECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVISSGGTD 294 (454)
Q Consensus 223 ----~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 294 (454)
.+..+ ..|...|.+++|+| ++++|++++.||.|++||+.+++.+..+. .|...|++++|+|++.+|++|+.|
T Consensus 112 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 112 KTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp TTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT
T ss_pred CCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC
Confidence 13333 36778999999999 99999999999999999999998876653 456689999999999999999999
Q ss_pred CcEEEeeccCCeEE--EEcc-ccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcE--E
Q psy17902 295 KSVRVWKIQEESQL--VFNG-HSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI--T 368 (454)
Q Consensus 295 g~i~i~d~~~~~~~--~~~~-~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i--~ 368 (454)
|.|++||++++... .+.. |...+.++.+.+ +.+|++++ ++.|++||+++...+..+...... ...+ .
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~------~~~~~~~ 264 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIP------EFKTGTV 264 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----------CCE
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccc------cccccce
Confidence 99999999998765 6666 889998888765 56777887 559999999998776655432111 1112 4
Q ss_pred EEEEecCCCEEEEecC-CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC---CCCEEEEEecCCCceeeeeeeCCC
Q psy17902 369 SVACLHNSDLVASGSY-DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS---DHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 369 ~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~---d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+++|+|+|++|++++. |+.|++|++......... .++..++|+| ++..|+++ +.|+.+.++-.....
T Consensus 265 ~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~-~~d~~~~~~~~~~~~ 335 (343)
T 3lrv_A 265 TYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK------DEESALCLQSDTADFTDMDVV-CGDGGIAAILKTNDS 335 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE------EEEEECCC----CCCCEEEEE-EETTEEEEEEECSSE
T ss_pred EEEECCCCCEEEEecCCCCcEEEEEEcccccceEe------cCceeEecCccccccceeEEE-ecCCceEEEEecCCe
Confidence 7999999999999988 999999999765432222 5688899999 88999988 788888888765443
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.6e-34 Score=269.51 Aligned_cols=273 Identities=14% Similarity=0.188 Sum_probs=213.7
Q ss_pred cCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeccc-CCcccCCCCCCc
Q psy17902 115 EGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSS-PFVKTDRKSYPP 192 (454)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~ 192 (454)
+|.+..+-.............+.+ |.+.|++++|+| ++++|++|+.||.|++|++.++...... .......+|...
T Consensus 56 ~g~i~v~~~~~~~~~~~~~~~~~~--h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~ 133 (402)
T 2aq5_A 56 GGAFLVLPLGKTGRVDKNVPLVCG--HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR 133 (402)
T ss_dssp SCCEEEEETTCCEECCTTCCCBCC--CSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC
T ss_pred CCEEEEEECccCCCCCCCCceEec--CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe
Confidence 455555543322222224455777 999999999999 8999999999999999999887432111 111122368889
Q ss_pred eEEEEEeCCC-cEEEEecCCCcEEEEeC-CCccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902 193 ILALAVANNN-ELVASGDNNSNIKLWSS-SLEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET 268 (454)
Q Consensus 193 v~~~~~~~~~-~~l~~~~~dg~v~vw~~-~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 268 (454)
|.+++|+|++ .+|++|+.||.|++||+ ++..+..+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..
T Consensus 134 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 134 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAE 213 (402)
T ss_dssp EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeee
Confidence 9999999998 69999999999999999 67777788 78999999999999999999999999999999999999888
Q ss_pred e-eccCCc-eeEEEeecCCCEEEEe---eCCCcEEEeeccCCeE---EEEccccCCeEEEEec-CCCEEEE-EeCCCCEE
Q psy17902 269 L-FGHQSA-ITSLDILAKNRVISSG---GTDKSVRVWKIQEESQ---LVFNGHSRGIDMTRRV-NDQQFIT-CGEDGTLS 338 (454)
Q Consensus 269 ~-~~~~~~-v~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~---~~~~~~~~~i~~~~~~-~~~~l~~-~~~dg~i~ 338 (454)
+ .+|.+. +.++.|+|++.+|++| +.|+.|++||+++... .....+...+..+.+. ++..|++ ++.||.|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 214 KDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp EECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEE
T ss_pred eccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEE
Confidence 8 688776 8999999999999998 7999999999998654 2333455556655554 5667754 55799999
Q ss_pred EEecCCCcc-ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902 339 LWSILKKVP-THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398 (454)
Q Consensus 339 iwd~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~ 398 (454)
+||+.++.+ +..+.... +...|.+++|+|++.++++ .++.+++|++.++..
T Consensus 294 i~d~~~~~~~~~~l~~~~-------~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 294 YFEITSEAPFLHYLSMFS-------SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEECSSTTCEEEEEEEC-------CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred EEEecCCCcceEeecccc-------cCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 999998875 44443221 2345999999999988764 466899999988643
No 104
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.8e-34 Score=267.28 Aligned_cols=257 Identities=18% Similarity=0.256 Sum_probs=208.8
Q ss_pred eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEeC----CCcc-------EEeecc---
Q psy17902 165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWSS----SLEH-------LHTFTG--- 229 (454)
Q Consensus 165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~----~~~~-------~~~~~~--- 229 (454)
.+.+|++.......... .|...|.+++|+|++. +|++|+.||.|++|++ .... ...+..
T Consensus 26 ~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (425)
T 1r5m_A 26 IDSSDDLDGFVKILKEI------VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFA 99 (425)
T ss_dssp --------CCCEECEEE------EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCC
T ss_pred ccccccchhhhhheeee------eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccccccccccccccccc
Confidence 34567665544332222 3667999999999999 9999999999999998 5433 333333
Q ss_pred -------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902 230 -------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI 302 (454)
Q Consensus 230 -------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 302 (454)
|...|++++|+|++++|++++.||.|++|| .++..+..+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 100 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 100 LSASSGKTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp CC------CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred ccccccCCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 678999999999999999999999999999 667788888899999999999999999999999999999999
Q ss_pred cCCeEE-EEccccCC---------------eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCc
Q psy17902 303 QEESQL-VFNGHSRG---------------IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW 366 (454)
Q Consensus 303 ~~~~~~-~~~~~~~~---------------i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (454)
.++... .+..+... +.++.+.++..+++++.+|.|++||+.++..+..+.. |...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~---------~~~~ 249 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIG---------HHGP 249 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECC---------CSSC
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeecc---------CCCc
Confidence 988877 45555444 6677777788999999999999999999888777653 4455
Q ss_pred EEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
|.+++|+|++++|++++.||.|++||+.+++.+..+.. |...|.+++|+|++ +|+++ +.|+.|++|+...+
T Consensus 250 i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~-~l~~~-~~d~~i~i~d~~~~ 320 (425)
T 1r5m_A 250 ISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG--HSQSIVSASWVGDD-KVISC-SMDGSVRLWSLKQN 320 (425)
T ss_dssp EEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC--CSSCEEEEEEETTT-EEEEE-ETTSEEEEEETTTT
T ss_pred eEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC--CCccEEEEEECCCC-EEEEE-eCCCcEEEEECCCC
Confidence 99999999999999999999999999999888888865 78899999999999 77777 89999999998654
No 105
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-34 Score=274.18 Aligned_cols=272 Identities=15% Similarity=0.171 Sum_probs=215.6
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCcEEEEeC-C---Cc-
Q psy17902 149 AVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSNIKLWSS-S---LE- 222 (454)
Q Consensus 149 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~-~---~~- 222 (454)
.|+|++..+++++ .|+.. +..+..+. .+|...|++++|+| ++.+|++|+.||.|+|||+ . +.
T Consensus 34 ~f~~~~~~~~~~~------~w~~~-g~~~~~~~-----~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~ 101 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLR-GKLIATLM-----ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV 101 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCC-CCEEEEEC-----TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC
T ss_pred hcCCccccccccc------ccccc-ceEEeeec-----cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc
Confidence 4678887777765 37743 44444442 26889999999999 9999999999999999998 3 22
Q ss_pred --cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---CceeEEEeec------------cCCceeEEE--eec
Q psy17902 223 --HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DRAYVETLFG------------HQSAITSLD--ILA 283 (454)
Q Consensus 223 --~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~------------~~~~v~~~~--~~~ 283 (454)
....+ .|...|++++|+|++.+|++|+.||.|++||+. +++.+..+.. +...+.++. +++
T Consensus 102 ~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 102 YSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp CSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred cceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 12232 599999999999999999999999999999994 4444433322 445566666 457
Q ss_pred CCCEEEEeeCCCcEEEeeccCCeEE-EEcc--ccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCC
Q psy17902 284 KNRVISSGGTDKSVRVWKIQEESQL-VFNG--HSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS 359 (454)
Q Consensus 284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~--~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 359 (454)
++.+|++++.|+.|++||++++..+ .+.. |...+.++.+. ++.+|++|+.||.|++||++++.++..+...
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----- 255 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG----- 255 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT-----
T ss_pred CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC-----
Confidence 8999999999999999999998877 5555 78888888776 5678999999999999999998888877532
Q ss_pred CCCCCCcEEEEEEe----cCCCEEEEecCCCcEEEEEcCCCceeeEeccC------------------------CCceee
Q psy17902 360 SSSEPNWITSVACL----HNSDLVASGSYDGCVKLWKITPKRTLEFLQDI------------------------PLSGVI 411 (454)
Q Consensus 360 ~~~~~~~i~~~~~s----~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~------------------------~~~~~v 411 (454)
+...|++++|+ |++.+|++|+.||.|++||+.+++.+..+... .|...|
T Consensus 256 ---~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v 332 (437)
T 3gre_A 256 ---DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNAL 332 (437)
T ss_dssp ---TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGG
T ss_pred ---CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCce
Confidence 23459999665 46779999999999999999998877666532 166779
Q ss_pred eEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 412 NSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 412 ~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
++++|+ ++++|+++ +.|+.|++|+...+..
T Consensus 333 ~~l~~~-~~~~l~s~-~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 333 STISVS-NDKILLTD-EATSSIVMFSLNELSS 362 (437)
T ss_dssp CCEEEE-TTEEEEEE-GGGTEEEEEETTCGGG
T ss_pred EEEEEC-CceEEEec-CCCCeEEEEECCCccc
Confidence 999999 77888888 8999999999876543
No 106
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=8.1e-34 Score=269.96 Aligned_cols=251 Identities=17% Similarity=0.260 Sum_probs=201.1
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc-----------cEEeecccC------------CCeEEEEEcCCC
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSS-LE-----------HLHTFTGHK------------APITGLAISFEC 243 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 243 (454)
.+...|.+++|+|++.+||+|+.||.|+||++. .. ....+.+|. ..|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 366799999999999999999999999999984 33 367888998 889999999998
Q ss_pred --CEEEEEeCCCcEEEEeCCCceeE---------------------------------------EE-eeccCCceeEEEe
Q psy17902 244 --DTLYSSSNDRSIKVWNIEDRAYV---------------------------------------ET-LFGHQSAITSLDI 281 (454)
Q Consensus 244 --~~l~~~~~dg~i~iwd~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~ 281 (454)
.+|++++.|+.|++||+.++... .. ..+|...|++++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999999764432 12 3579999999999
Q ss_pred ecCCCEEEEeeCCCcEEEeeccCC-eEEE--------EccccCCeEEEEecCC--CEEEEEeCCCCEEEEecCCCcc---
Q psy17902 282 LAKNRVISSGGTDKSVRVWKIQEE-SQLV--------FNGHSRGIDMTRRVND--QQFITCGEDGTLSLWSILKKVP--- 347 (454)
Q Consensus 282 ~~~~~~l~~~~~dg~i~i~d~~~~-~~~~--------~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~--- 347 (454)
+|++++|++| .|+.|++||+... .... +.+|...+.++.+.+. .+|++++.||.|++||++++..
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 9999999998 7999999999943 3333 4578888988888764 6999999999999999998876
Q ss_pred -ceeeecccCCCC---CCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC-CceeeEeccCCCcee------------
Q psy17902 348 -THTIPVAHGYDS---SSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP-KRTLEFLQDIPLSGV------------ 410 (454)
Q Consensus 348 -~~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~------------ 410 (454)
+..+........ ...|...|.+++|+|++++|++++. |.|++||+.. +.++..+.. |...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV--HEYLRSKLCSLYENDC 341 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES--CGGGTTTHHHHHHTSG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec--cccccccccccccccc
Confidence 455443221000 0001125999999999999999999 9999999987 777777765 3321
Q ss_pred ---eeEEEEcCCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 411 ---INSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 411 ---v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
+..++|+|++++|+++ +.|+.|++|+...+..
T Consensus 342 i~~~~~~~~s~~~~~l~s~-s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVVMTG-SYNNFFRMFDRNTKRD 376 (447)
T ss_dssp GGCCCCEEECTTSSEEEEE-CSTTEEEEEETTTCCE
T ss_pred cccceEEEECCCCCEEEEe-ccCCEEEEEEcCCCcc
Confidence 3349999999999888 8999999999877643
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-34 Score=288.35 Aligned_cols=248 Identities=17% Similarity=0.322 Sum_probs=210.2
Q ss_pred CCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---CccEEeecccCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCC
Q psy17902 187 RKSYPPILALAVANNNELVASGDNNSNIKLWSSS---LEHLHTFTGHKAPITGLAISFE--CDTLYSSSNDRSIKVWNIE 261 (454)
Q Consensus 187 ~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~---~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~ 261 (454)
.+|.+.|++++|+|++++|++|+.||.|+||++. ...+..+.+|.++|++++|+|+ +++|++|+.||.|++||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 3799999999999999999999999999999983 3556788899999999999988 9999999999999999999
Q ss_pred Cce--eEEEeeccCCceeEEEeecC--CCEEEEeeCCCcEEEeeccCCe---EEEEccccCCeEEEEecC----------
Q psy17902 262 DRA--YVETLFGHQSAITSLDILAK--NRVISSGGTDKSVRVWKIQEES---QLVFNGHSRGIDMTRRVN---------- 324 (454)
Q Consensus 262 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~i~~~~~~~---------- 324 (454)
++. .+..+.+|...|++++|+|+ +++|++|+.||.|++||++++. ...+.+|...+.++.+.+
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC--------
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccc
Confidence 886 67777889999999999999 9999999999999999998873 336778888998888876
Q ss_pred ----CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC---CCEEEEecCCCcEEEEEcCCCc
Q psy17902 325 ----DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN---SDLVASGSYDGCVKLWKITPKR 397 (454)
Q Consensus 325 ----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---~~~l~~~~~dg~v~iwd~~~~~ 397 (454)
+..+++|+.||.|++||++++.......... ..|...|++++|+|+ +.+|++|+.||.|++||+.++.
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-----~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-----EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE-----CCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeee-----cCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 6789999999999999998874432222111 125666999999999 8999999999999999998863
Q ss_pred ee---eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 398 TL---EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 398 ~~---~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
.. .......+.+.|++++|+|+|++|+++ +.||.|++|+...
T Consensus 241 ~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 241 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENL 285 (753)
T ss_dssp SCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CSSSCEECCBCCS
T ss_pred CcceeEEeccCCCCCceEEEEEcCCCCEEEEE-cCCCEEEEEecCC
Confidence 11 222223477889999999999999998 8899999999874
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.4e-34 Score=259.98 Aligned_cols=244 Identities=14% Similarity=0.126 Sum_probs=205.7
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCcc----EEeecccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeC-C
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH----LHTFTGHKAPITGLAISFECD-TLYSSSNDRSIKVWNI-E 261 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~-~ 261 (454)
+|...|.+++|+|++.+|++++.||.|++|++.... ...+..|...|.+++|+|+++ +|++|+.||.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 688899999999999999999999999999994333 566678999999999999999 9999999999999999 8
Q ss_pred CceeEEEeec--cCCceeEEEeecCCCEEEEeeCCCcEEEeeccC---------CeEEEEccccCCeEEEEecCCCEEEE
Q psy17902 262 DRAYVETLFG--HQSAITSLDILAKNRVISSGGTDKSVRVWKIQE---------ESQLVFNGHSRGIDMTRRVNDQQFIT 330 (454)
Q Consensus 262 ~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~~~i~~~~~~~~~~l~~ 330 (454)
++.. ..+.+ |...|.+++|+| +++|++++.|+.|++||+++ ...+....+...+.++.+.++. +++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~ 165 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-LIV 165 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-EEE
T ss_pred CCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-EEE
Confidence 7754 67778 999999999999 99999999999999999987 5555333477888888887665 999
Q ss_pred EeCCCCEEEEecCC-CccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcCCC------ceeeEe
Q psy17902 331 CGEDGTLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKITPK------RTLEFL 402 (454)
Q Consensus 331 ~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~------~~~~~~ 402 (454)
++.++.|++||+.+ +......... .+...+.+++|+| ++++|++++.||.|++|++... .....+
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~~-------~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 238 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEES-------GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEEC-------SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEE
T ss_pred EeCCCeEEEEECCccccccceeeec-------CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceee
Confidence 99999999999987 5432222111 1345599999999 9999999999999999999876 666666
Q ss_pred ccCC-------CceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 403 QDIP-------LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 403 ~~~~-------~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
.... |.+.|++++|+|++++|+++ +.|+.|++|+...+.
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA-GSDGIISCWNLQTRK 284 (342)
T ss_dssp ECCCCCTTCCSSCCCEEEEEECTTTCCEEEE-ETTSCEEEEETTTTE
T ss_pred ecccccccccccceeEEEEEEcCCCCEEEEe-cCCceEEEEcCccHh
Confidence 6521 24489999999999999988 799999999987653
No 109
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=259.89 Aligned_cols=250 Identities=14% Similarity=0.207 Sum_probs=200.1
Q ss_pred CCCCeEEEEEcCC---CCEEEEEeCCCeEEEEEcCCCc-eecccCCcccCCCCCCceEEEEE------eCCCcEEEEecC
Q psy17902 141 HRASITCIAVTSD---SKHVYSACKDGIIIKWLLETRS-KVCSSPFVKTDRKSYPPILALAV------ANNNELVASGDN 210 (454)
Q Consensus 141 h~~~V~~~~~s~~---~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~ 210 (454)
|...|++++|+|+ +++|++|+.||.|++||+.++. ....+. +|...|.+++| +|++++|++|+.
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~s~~~~~l~~~~~ 137 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVK------GHKEIINAIDGIGGLGIGEGAPEIVTGSR 137 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEEC------CCSSCEEEEEEESGGGCC-CCCEEEEEET
T ss_pred ccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEE------ecccceEEEeeccccccCCCccEEEEEeC
Confidence 9999999999998 6999999999999999999876 444443 68889999955 678999999999
Q ss_pred CCcEEEEeC-CCc-cEEeecccCC----CeEEEE----EcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902 211 NSNIKLWSS-SLE-HLHTFTGHKA----PITGLA----ISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD 280 (454)
Q Consensus 211 dg~v~vw~~-~~~-~~~~~~~~~~----~v~~~~----~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 280 (454)
||.|++||+ ... .+..+..|.+ .+.+++ |+|++.+|++++.||.|++||+++++.... ..|...|.+++
T Consensus 138 d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~ 216 (357)
T 3i2n_A 138 DGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLE 216 (357)
T ss_dssp TSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEE
T ss_pred CCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEE
Confidence 999999999 443 5677766555 899998 678999999999999999999999887544 57899999999
Q ss_pred eec---CCCEEEEeeCCCcEEEeeccCCeEE-E-----EccccCCeEEEEecCC-C-EEEEEeCCCCEEEEecCCCccce
Q psy17902 281 ILA---KNRVISSGGTDKSVRVWKIQEESQL-V-----FNGHSRGIDMTRRVND-Q-QFITCGEDGTLSLWSILKKVPTH 349 (454)
Q Consensus 281 ~~~---~~~~l~~~~~dg~i~i~d~~~~~~~-~-----~~~~~~~i~~~~~~~~-~-~l~~~~~dg~i~iwd~~~~~~~~ 349 (454)
|+| ++.+|++++.||.|++||++++... . +..|...+.++.+.+. . +|++++.||.|++||+.......
T Consensus 217 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 296 (357)
T 3i2n_A 217 FDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRS 296 (357)
T ss_dssp ESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC-
T ss_pred cCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccc
Confidence 999 8999999999999999999876544 2 3378889988887764 4 68999999999999998654331
Q ss_pred eeecccC----------CCCCCCCCCcEEEEEEecCCCEEE-EecCCCcEEEEEcCCCc
Q psy17902 350 TIPVAHG----------YDSSSSEPNWITSVACLHNSDLVA-SGSYDGCVKLWKITPKR 397 (454)
Q Consensus 350 ~~~~~~~----------~~~~~~~~~~i~~~~~s~~~~~l~-~~~~dg~v~iwd~~~~~ 397 (454)
....... ......|...|++++|+|++++|+ +++.||.|++|++.+..
T Consensus 297 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 297 KKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp -CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 1100000 000112566699999999999888 89999999999998654
No 110
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.5e-33 Score=266.41 Aligned_cols=257 Identities=15% Similarity=0.250 Sum_probs=206.0
Q ss_pred eEeEeccCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecc----cCCcccCCCCCCceEEEEEeCCCc-EE
Q psy17902 132 VCTKFNGKPHRASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCS----SPFVKTDRKSYPPILALAVANNNE-LV 205 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l 205 (454)
....+.+ |.+.|++++|+|+ +.+|++++.+|.|++|++.+...... ........+|...|.+++|+|++. +|
T Consensus 120 ~~~~~~~--h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l 197 (430)
T 2xyi_A 120 EIEIKIN--HEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYL 197 (430)
T ss_dssp EEEEEEE--ESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEE
T ss_pred EEEEEEc--CCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeE
Confidence 3445556 9999999999997 78999999999999999986211000 111112226888999999999988 99
Q ss_pred EEecCCCcEEEEeCCC-c---c----EEeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCc---eeEEEeeccC
Q psy17902 206 ASGDNNSNIKLWSSSL-E---H----LHTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDR---AYVETLFGHQ 273 (454)
Q Consensus 206 ~~~~~dg~v~vw~~~~-~---~----~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~ 273 (454)
++|+.||.|++|++.. . . ...+..|...|.+++|+| ++.+|++++.||.|++||++++ ..+..+..|.
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 9999999999999943 1 1 456678999999999999 6789999999999999999987 5667778999
Q ss_pred CceeEEEeecCCC-EEEEeeCCCcEEEeeccCCe-E-EEEccccCCeEEEEecCC--CEEEEEeCCCCEEEEecCCCccc
Q psy17902 274 SAITSLDILAKNR-VISSGGTDKSVRVWKIQEES-Q-LVFNGHSRGIDMTRRVND--QQFITCGEDGTLSLWSILKKVPT 348 (454)
Q Consensus 274 ~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~-~-~~~~~~~~~i~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~ 348 (454)
..|++++|+|++. +|++|+.||.|++||+++.. . ..+..|...+.++.+.+. ..|++++.||.|++||+......
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 9999999999986 78899999999999999743 3 377788999988888764 36889999999999999763211
Q ss_pred -----------eeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC
Q psy17902 349 -----------HTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 349 -----------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~ 396 (454)
..+.. ...|...|++++|+|++. +|++++.||.|+||++...
T Consensus 358 ~~~~~~~~~~~~~~~~------~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFI------HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEE------CCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEE------cCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 11111 113566699999999999 9999999999999998754
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-33 Score=264.97 Aligned_cols=256 Identities=21% Similarity=0.438 Sum_probs=204.5
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
....+.+ |.+.|++++| ++++|++|+.||.|++||+.++.....+. .|...|.+++|++ .+|++|+.|
T Consensus 165 ~~~~~~~--h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~------~h~~~v~~l~~~~--~~l~s~s~d 232 (435)
T 1p22_A 165 CKRILTG--HTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLI------HHCEAVLHLRFNN--GMMVTCSKD 232 (435)
T ss_dssp EEEEECC--CSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEEC------CCCSCEEEEECCT--TEEEEEETT
T ss_pred EEEEEcC--CCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEc------CCCCcEEEEEEcC--CEEEEeeCC
Confidence 4567788 9999999999 67899999999999999999988877665 5888999999974 599999999
Q ss_pred CcEEEEeC-CCccE---EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902 212 SNIKLWSS-SLEHL---HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV 287 (454)
Q Consensus 212 g~v~vw~~-~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 287 (454)
|.|++||+ ....+ ..+.+|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|...|.++.++ +++
T Consensus 233 g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~ 308 (435)
T 1p22_A 233 RSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRL 308 (435)
T ss_dssp SCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTE
T ss_pred CcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCE
Confidence 99999999 44333 667889999999999 67899999999999999999999999999999999999994 689
Q ss_pred EEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc---------cceeeecccCC
Q psy17902 288 ISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV---------PTHTIPVAHGY 357 (454)
Q Consensus 288 l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~ 357 (454)
|++|+.||.|++||++++..+ .+.+|...+.++.+ ++.+|++|+.||.|++||+.++. ++..+.
T Consensus 309 l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~----- 382 (435)
T 1p22_A 309 VVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV----- 382 (435)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC-CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC-----
T ss_pred EEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe-cCCEEEEEeCCCcEEEEECCCCCCccccccchheeecc-----
Confidence 999999999999999998877 78889999998888 78899999999999999997654 333332
Q ss_pred CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC
Q psy17902 358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS 418 (454)
Q Consensus 358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~ 418 (454)
.|...|.+++| ++.+|++|+.||+|++||+.+........ ...+..++.|.+
T Consensus 383 ----~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~ 434 (435)
T 1p22_A 383 ----EHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP---PRSPSRTYTYIS 434 (435)
T ss_dssp ----CCSSCCCCEEE--CSSCEEECCSSSEEEEEC--------------------------
T ss_pred ----CCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCC---CCCCccceeeec
Confidence 24556999999 77899999999999999998765444332 334455565543
No 112
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.4e-32 Score=244.35 Aligned_cols=247 Identities=16% Similarity=0.258 Sum_probs=205.3
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN 213 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 213 (454)
+.+....|...|++++|+|++++|++|+.||.|++|++.+++.+..+. +|...+.++.+ ++.++++|+.++.
T Consensus 59 ~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~------~h~~~~~~~~~--~~~~l~s~~~~~~ 130 (318)
T 4ggc_A 59 QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT------SHSARVGSLSW--NSYILSSGSRSGH 130 (318)
T ss_dssp EEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE------CCSSCEEEEEE--ETTEEEEEETTSE
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEec------CccceEEEeec--CCCEEEEEecCCc
Confidence 334433399999999999999999999999999999999998877665 57777766554 5679999999999
Q ss_pred EEEEeC--CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee----EEEeeccCCceeEEEeecCCCE
Q psy17902 214 IKLWSS--SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY----VETLFGHQSAITSLDILAKNRV 287 (454)
Q Consensus 214 v~vw~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~----~~~~~~~~~~v~~~~~~~~~~~ 287 (454)
+.+|+. ....+..+.+|...+.++.|++++.+|++++.||.|++||+.+++. ......|.+.|.++.++|.+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 210 (318)
T 4ggc_A 131 IHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN 210 (318)
T ss_dssp EEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT
T ss_pred eEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc
Confidence 999998 4456678889999999999999999999999999999999987653 3445568889999999988753
Q ss_pred ---EEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEe--CCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902 288 ---ISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCG--EDGTLSLWSILKKVPTHTIPVAHGYDSSS 361 (454)
Q Consensus 288 ---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 361 (454)
+++++.++.|++||...........+...+..+.+ +.+..+++++ .|+.|++||+.+++++..+..
T Consensus 211 ~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g-------- 282 (318)
T 4ggc_A 211 VLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG-------- 282 (318)
T ss_dssp EEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC--------
T ss_pred EEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC--------
Confidence 34677889999999999888866666666655554 4566666654 799999999999999888753
Q ss_pred CCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902 362 SEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR 397 (454)
Q Consensus 362 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~ 397 (454)
|...|++++|+|+|++|++|+.||+|+|||+....
T Consensus 283 -H~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 283 -HTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp -CSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred -CCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 55669999999999999999999999999997543
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.9e-33 Score=261.08 Aligned_cols=240 Identities=13% Similarity=0.147 Sum_probs=171.8
Q ss_pred EEEEeCCCcEEEEecCCCcEEEEeCC-Ccc-----EEeecccCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEeC
Q psy17902 195 ALAVANNNELVASGDNNSNIKLWSSS-LEH-----LHTFTGHKAPITGLAISF--------ECDTLYSSSNDRSIKVWNI 260 (454)
Q Consensus 195 ~~~~~~~~~~l~~~~~dg~v~vw~~~-~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg~i~iwd~ 260 (454)
...+++++.+|++|+.|++|+|||.. +.. +..+.+|.+.|++++|+| ++++|++|+.|++|+|||+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 33444567789999999999999983 322 234678999999999998 7889999999999999999
Q ss_pred CCceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEE--------------------------Eccc
Q psy17902 261 EDRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLV--------------------------FNGH 313 (454)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~--------------------------~~~~ 313 (454)
.++..+..+..|...|.+++|+|++ ++|++++.|++|++||++++.... ..+|
T Consensus 174 ~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 174 TDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp ETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 9888888888999999999999987 589999999999999998765431 1234
Q ss_pred cCCeEEEEe--cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC----------CCCCCcEEEEEEec--CCCEE
Q psy17902 314 SRGIDMTRR--VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS----------SSEPNWITSVACLH--NSDLV 379 (454)
Q Consensus 314 ~~~i~~~~~--~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----------~~~~~~i~~~~~s~--~~~~l 379 (454)
...+.++.+ +++..+++++.|+.+++||+..+.....+......... ..+.. .....|+| ++.++
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPS-LLGACPHPRYMDYFA 332 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCC-SSCCEECSSCTTEEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCc-ceeEEEccCCCCEEE
Confidence 445555554 46789999999999999999877665544322211000 00111 12233443 34477
Q ss_pred EEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 380 ASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 380 ~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
++|+.||+|++||+.++.....+.. |..+|.+++|+|||++||++ +.+ .+.+|...
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~~~~~~--~~~~V~svafspdG~~LA~a-s~~-Gv~lvrL~ 388 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSNSIPIQ--LGMPIVDFCWHQDGSHLAIA-TEG-SVLLTRLM 388 (393)
T ss_dssp EEETTTTEEEEEETTCTTCCEEEEE--CSSCEEEEEECTTSSEEEEE-ESS-EEEEEEEG
T ss_pred EEECCCCEEEEEECCCCcEEEEecC--CCCcEEEEEEcCCCCEEEEE-eCC-CeEEEEEe
Confidence 8889999999999999987776665 77899999999999999988 544 46666543
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.1e-31 Score=248.72 Aligned_cols=265 Identities=10% Similarity=0.091 Sum_probs=214.7
Q ss_pred CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeC-CCccEEeecccCC
Q psy17902 155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSS-SLEHLHTFTGHKA 232 (454)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~-~~~~~~~~~~~~~ 232 (454)
.++++++.|+.|++||+.+++....+. +...+.+++|+|++++| ++++.++.|++||+ +++.+..+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~- 74 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIP-------VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS- 74 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-------CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEee-------cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-
Confidence 467888899999999999988776654 23458999999999976 67778999999999 666666666554
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEeeCCCcEEEeeccCCeEEEE
Q psy17902 233 PITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSGGTDKSVRVWKIQEESQLVF 310 (454)
Q Consensus 233 ~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~ 310 (454)
.+.+++|+|++++|++++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++.| ++++.++.|++||+.+++....
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 999999999999886555 6799999999999988777644 568999999999877 6888899999999999887743
Q ss_pred ccccCCeEEEEec-CCCEE-EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec---CC
Q psy17902 311 NGHSRGIDMTRRV-NDQQF-ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS---YD 385 (454)
Q Consensus 311 ~~~~~~i~~~~~~-~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~---~d 385 (454)
......+..+.+. ++..+ ++++.++.|++||+.++.....+.. ...+.+++|+|++++|++++ .+
T Consensus 154 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~----------~~~~~~~~~~~~g~~l~~~~~~~~~ 223 (391)
T 1l0q_A 154 VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKV----------EAAPSGIAVNPEGTKAYVTNVDKYF 223 (391)
T ss_dssp EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC----------SSEEEEEEECTTSSEEEEEEECSSC
T ss_pred EecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEec----------CCCccceEECCCCCEEEEEecCcCC
Confidence 3333444555554 56666 5677889999999999887776653 23489999999999988887 68
Q ss_pred CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
+.|++||+.+++.+..+.. + ..+.+++|+|+|++|+++++.|+.|++|+...+
T Consensus 224 ~~v~~~d~~~~~~~~~~~~--~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 224 NTVSMIDTGTNKITARIPV--G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp CEEEEEETTTTEEEEEEEC--C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred CcEEEEECCCCeEEEEEec--C-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 9999999999888877764 2 357899999999999777689999999998765
No 115
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=7.7e-33 Score=255.35 Aligned_cols=248 Identities=13% Similarity=0.150 Sum_probs=192.9
Q ss_pred EeccCCCCCCeEEEEEcCCCCEEEEEe-----------CCCeEEEEEcCCCceecccCC---cccCCCCCCceEEEEEeC
Q psy17902 135 KFNGKPHRASITCIAVTSDSKHVYSAC-----------KDGIIIKWLLETRSKVCSSPF---VKTDRKSYPPILALAVAN 200 (454)
Q Consensus 135 ~~~~~~h~~~V~~~~~s~~~~~l~~~~-----------~dg~i~iwd~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~ 200 (454)
.|.+ |...|.++++++ +.+++|+ .|+.+++|++........... ......+...+.+++|+|
T Consensus 68 ~l~~--~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp 143 (365)
T 4h5i_A 68 ALED--NDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR 143 (365)
T ss_dssp ECCT--TSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT
T ss_pred EccC--CCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC
Confidence 4566 999999988754 6777664 467899999876432211100 011123445689999999
Q ss_pred CCcEEEE--ecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE--EeeccCCc
Q psy17902 201 NNELVAS--GDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE--TLFGHQSA 275 (454)
Q Consensus 201 ~~~~l~~--~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~ 275 (454)
||++|++ ++.|++|+|||+ ++..+..+. |...|.+++|+|+|++|++++.+ .+.+|+..++..+. ....|...
T Consensus 144 Dg~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 144 EGTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp TSSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEE
T ss_pred CCCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCC
Confidence 9998765 446899999999 556666654 78899999999999999999855 56677777666553 34568899
Q ss_pred eeEEEeecCCCEEEEeeCCC----cEEEeeccCCeEE-----EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCC
Q psy17902 276 ITSLDILAKNRVISSGGTDK----SVRVWKIQEESQL-----VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKK 345 (454)
Q Consensus 276 v~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~~-----~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~ 345 (454)
|.+++|+|++.++++++.|+ .+++|++...... .+.+|...|.++.++ ++.+|++|+.|++|+|||+.++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 99999999999999999887 6888998876543 466788888877765 5778999999999999999999
Q ss_pred ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
+++..+... |...|++++|+|+|++||+|+.|++|+||++...
T Consensus 302 ~~~~~~~~g--------H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 302 SMSKIFKQA--------HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTS--------SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cEEEEecCc--------ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 988876432 4566999999999999999999999999999644
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=245.57 Aligned_cols=242 Identities=14% Similarity=0.279 Sum_probs=197.5
Q ss_pred CCCCceEEEEEeCC---CcEEEEecCCCcEEEEeCC--CccE-EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902 188 KSYPPILALAVANN---NELVASGDNNSNIKLWSSS--LEHL-HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE 261 (454)
Q Consensus 188 ~~~~~v~~~~~~~~---~~~l~~~~~dg~v~vw~~~--~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 261 (454)
+|...|++++|+|+ |.+|++|+.||.|++|++. +..+ ..+.+|...|++++|+|++++|++++.||.|++||+.
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLS 116 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcC
Confidence 68999999999999 6999999999999999994 4444 6788899999999999999999999999999999999
Q ss_pred CceeEEEeeccCCceeEEEe--ecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902 262 DRAYVETLFGHQSAITSLDI--LAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSL 339 (454)
Q Consensus 262 ~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i 339 (454)
++..+. +..|...|++++| +|++.+|++++.||.|++||+++++.+........+.++.+. ...+++++.++.+.+
T Consensus 117 ~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~ 194 (368)
T 3mmy_A 117 SNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI-YPMAVVATAERGLIV 194 (368)
T ss_dssp TTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE-TTEEEEEEGGGCEEE
T ss_pred CCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec-CCeeEEEeCCCcEEE
Confidence 998776 5579999999999 889999999999999999999988776333333344444443 457888999999999
Q ss_pred EecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCE----EEEecCCCcEEEEEcCCC---ceeeEeccCCCce---
Q psy17902 340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDL----VASGSYDGCVKLWKITPK---RTLEFLQDIPLSG--- 409 (454)
Q Consensus 340 wd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~----l~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~--- 409 (454)
|++............. +...+.++.+.++... +++++.||.|++|++... ..+..+.. |..
T Consensus 195 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~--~~~~~~ 265 (368)
T 3mmy_A 195 YQLENQPSEFRRIESP-------LKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC--HRSNGT 265 (368)
T ss_dssp EECSSSCEEEEECCCS-------CSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC--SEEC--
T ss_pred EEeccccchhhhcccc-------ccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee--eecccc
Confidence 9998764433322111 2233677777766654 999999999999999887 44555554 444
Q ss_pred ---------eeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 410 ---------VINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 410 ---------~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
.|++++|+|++++|+++ +.|+.|++|+...+
T Consensus 266 ~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~i~iwd~~~~ 305 (368)
T 3mmy_A 266 NTSAPQDIYAVNGIAFHPVHGTLATV-GSDGRFSFWDKDAR 305 (368)
T ss_dssp --CCCEEECCEEEEEECTTTCCEEEE-ETTSCEEEEETTTT
T ss_pred cccccccccceEEEEEecCCCEEEEE-ccCCeEEEEECCCC
Confidence 69999999999999998 89999999998764
No 117
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-30 Score=248.37 Aligned_cols=238 Identities=12% Similarity=0.128 Sum_probs=199.3
Q ss_pred CceEEEEEeCCCcEEEEecCCCcEEEEeC-CCc---cEEeec--------------------------------------
Q psy17902 191 PPILALAVANNNELVASGDNNSNIKLWSS-SLE---HLHTFT-------------------------------------- 228 (454)
Q Consensus 191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~---~~~~~~-------------------------------------- 228 (454)
.++.+++|+++|++|+++. ++.|++||+ ++. .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 3789999999999777664 789999998 665 444443
Q ss_pred ----------------ccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCC--CceeEEEee--ccCCceeEEEeecCCCE
Q psy17902 229 ----------------GHKAPITGLAISFECDTL-YSSSNDRSIKVWNIE--DRAYVETLF--GHQSAITSLDILAKNRV 287 (454)
Q Consensus 229 ----------------~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~--~~~~~~~~~--~~~~~v~~~~~~~~~~~ 287 (454)
.|.+.|++++|+|++++| ++++.||.|++||+. ++..+..+. .|...|++++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 233479999999999996 889899999999999 888887775 56789999999999999
Q ss_pred EEEeeCCCcEEEeeccCCeEE-----EEccccCCeEEEEecC----CCEEEEEeCCCCEEEEecCCCccceeeecccCCC
Q psy17902 288 ISSGGTDKSVRVWKIQEESQL-----VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD 358 (454)
Q Consensus 288 l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 358 (454)
|++|+.+|.|++|++.++... .+.+|...+.++.+.+ +.+|++++.|+.|++||+.++..+..+..
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~----- 238 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF----- 238 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC-----
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec-----
Confidence 999999999999999876643 5667888888887765 45899999999999999998887766432
Q ss_pred CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC-----------------------CCceeeeEEE
Q psy17902 359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-----------------------PLSGVINSLV 415 (454)
Q Consensus 359 ~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~l~ 415 (454)
.|...|++++|+ ++.+|++|+.|++|++||+.+++.+..+... .....|.+++
T Consensus 239 ---~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 239 ---GHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp ---CCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred ---CCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 245669999999 9999999999999999999999887776531 1235689999
Q ss_pred EcCCCCEEEEEecCCCceeeeee
Q psy17902 416 FTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 416 ~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
|+|++++|+++++.++.|++|+.
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEe
Confidence 99999999999658999999999
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.4e-29 Score=234.77 Aligned_cols=251 Identities=14% Similarity=0.081 Sum_probs=201.1
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-Eec
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGD 209 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~ 209 (454)
....+.+ |. .+.+++|+|++++| ++++.|+.|++||+.+++....+. +...+.+++|+|++++|+ +++
T Consensus 24 ~~~~~~~--~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~-------~~~~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 24 VTATIPV--GS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-------AGSSPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp EEEEEEC--SS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-------CSSSEEEEEECTTSSEEEEEET
T ss_pred EEEEeec--CC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE-------CCCCccceEECCCCCEEEEEEC
Confidence 3445555 54 48999999999987 566789999999999988776654 223899999999999875 455
Q ss_pred CCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCE
Q psy17902 210 NNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV 287 (454)
Q Consensus 210 ~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 287 (454)
.++.|++||+ .++.+..+. +...+.+++|+|+++.| ++++.++.|++||+.+++.+..+..+ ..+.+++|+|++++
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~ 171 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTK 171 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSE
T ss_pred CCCEEEEEECCCCeEEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCE
Confidence 6799999999 455555555 45578999999999977 67778999999999999988887655 45699999999987
Q ss_pred E-EEeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEe---CCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902 288 I-SSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCG---EDGTLSLWSILKKVPTHTIPVAHGYDSSSS 362 (454)
Q Consensus 288 l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 362 (454)
| ++++.++.|++||++++.......+...+..+.+. ++.++++++ .++.|++||+.+++.+..+....
T Consensus 172 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~------- 244 (391)
T 1l0q_A 172 VYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP------- 244 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-------
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-------
Confidence 7 67788999999999998887555555556655554 566787777 68999999999998877776422
Q ss_pred CCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCCceeeEecc
Q psy17902 363 EPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPKRTLEFLQD 404 (454)
Q Consensus 363 ~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~~~~~~~~~ 404 (454)
.+.+++|+|++++| ++++.|+.|++||+.+++.+..+..
T Consensus 245 ---~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 245 ---DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp ---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred ---CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 28899999999977 6778899999999999988777654
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1e-31 Score=250.56 Aligned_cols=243 Identities=9% Similarity=0.096 Sum_probs=177.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC--------CCcEEEEecCCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN--------NNELVASGDNNS 212 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~dg 212 (454)
|...+....+++++.+|++|+.|++|+|||+.++...... ......+|...|.+++|+| ++++||+|+.|+
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~-~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQH-VLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEE-EECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceee-eecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 4444555555667789999999999999999887654321 1223347999999999998 789999999999
Q ss_pred cEEEEeC-CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEE----------------------
Q psy17902 213 NIKLWSS-SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVET---------------------- 268 (454)
Q Consensus 213 ~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~---------------------- 268 (454)
+|+|||+ ....+..+..|..+|.+++|+|++ .+|++|+.||+|++||+.+++....
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 9999999 677788888899999999999987 4899999999999999987654322
Q ss_pred ---eeccCCceeEEEee-cCCCEEEEeeCCCcEEEeeccCCeEE-EEcccc-------------------CCeEEEEecC
Q psy17902 269 ---LFGHQSAITSLDIL-AKNRVISSGGTDKSVRVWKIQEESQL-VFNGHS-------------------RGIDMTRRVN 324 (454)
Q Consensus 269 ---~~~~~~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-------------------~~i~~~~~~~ 324 (454)
..+|...|.++.|+ +++..|++++.|+.+++||+..+... .+..+. ..+.+++++.
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 23577889999997 78999999999999999999876543 222221 1223334432
Q ss_pred -CC-EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902 325 -DQ-QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT 394 (454)
Q Consensus 325 -~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~ 394 (454)
+. ++++|+.||.|++||+.++........ |..+|.+++|+|+|++||+++.+| +.+|.+.
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~---------~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPIQ---------LGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEEE---------CSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEecC---------CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 33 455677899999999999887776543 334599999999999999999776 7777653
No 120
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=6.1e-31 Score=241.15 Aligned_cols=278 Identities=19% Similarity=0.201 Sum_probs=194.4
Q ss_pred cCcEeeeehhhhccCceeEeEeccCCCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEEcCCCceeccc---CCcccCCCC
Q psy17902 115 EGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTS--DSKHVYSACKDGIIIKWLLETRSKVCSS---PFVKTDRKS 189 (454)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~~~ 189 (454)
++.+..|-...-.........+.+ |...|++++|+| ++++|++|+.||.|++||+.++...... ........|
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T 3f3f_A 32 DQHIKVFKLDKDTSNWELSDSWRA--HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS 109 (351)
T ss_dssp TSEEEEEEECSSSCCEEEEEEEEC--CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC
T ss_pred CCeEEEEECCCCCCcceecceecc--CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc
Confidence 344555544333333346677888 999999999999 6999999999999999999876421100 011112258
Q ss_pred CCceEEEEEeCC--CcEEEEecCCCcEEEEeC-CCccEEee-------------cccCCCeEEEEEcCC---CCEEEEEe
Q psy17902 190 YPPILALAVANN--NELVASGDNNSNIKLWSS-SLEHLHTF-------------TGHKAPITGLAISFE---CDTLYSSS 250 (454)
Q Consensus 190 ~~~v~~~~~~~~--~~~l~~~~~dg~v~vw~~-~~~~~~~~-------------~~~~~~v~~~~~~~~---~~~l~~~~ 250 (454)
...|.+++|+|+ +.+|++++.||.|++||+ ....+..+ ..|...+.+++|+|+ +.+|++++
T Consensus 110 ~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~ 189 (351)
T 3f3f_A 110 KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA 189 (351)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE
T ss_pred CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec
Confidence 889999999999 999999999999999998 44333222 268889999999997 89999999
Q ss_pred CCCcEEEEeCCCcee--EEEeeccCCceeEEEeecCC----CEEEEeeCCCcEEEeeccCCeEEEE-ccccCCeEEEEec
Q psy17902 251 NDRSIKVWNIEDRAY--VETLFGHQSAITSLDILAKN----RVISSGGTDKSVRVWKIQEESQLVF-NGHSRGIDMTRRV 323 (454)
Q Consensus 251 ~dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~i~~~~~~ 323 (454)
.++.+.+|+...+.. +..+.+|...|++++|+|++ ++|++++.||.|++||++.+..... ..+..........
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 269 (351)
T 3f3f_A 190 LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNS 269 (351)
T ss_dssp TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------
T ss_pred CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCC
Confidence 999998888877765 66777899999999999998 8999999999999999997655421 1111111111111
Q ss_pred C-CCEE----EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce
Q psy17902 324 N-DQQF----ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398 (454)
Q Consensus 324 ~-~~~l----~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~ 398 (454)
. ...+ ..+.....+.+|+......+..+.. |...|++++|+|++++|++|+.||.|++|++.++..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 270 ADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDD---------HNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp ---------------------CCSEEEEEEEEECT---------TSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSC
T ss_pred cccccccccccccccceeeeecccccccEEEEEec---------ccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcc
Confidence 1 1111 2223444556666555555555542 455699999999999999999999999999998876
Q ss_pred eeEec
Q psy17902 399 LEFLQ 403 (454)
Q Consensus 399 ~~~~~ 403 (454)
+..+.
T Consensus 341 ~~~~~ 345 (351)
T 3f3f_A 341 FKCMS 345 (351)
T ss_dssp EEEEE
T ss_pred hhhee
Confidence 66554
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.98 E-value=2.6e-30 Score=237.71 Aligned_cols=235 Identities=10% Similarity=0.103 Sum_probs=180.9
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeE
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYV 266 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~ 266 (454)
.|...|.+++|+|+|++|++|+.+| ++||++......... +...+..+++.++++.+ ++++.|++|++||+.+++.+
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~ 94 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQ-EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV 94 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEE-ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeee-ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence 5888999999999999999998775 789998433222222 22357888899888877 56778899999999999998
Q ss_pred EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCC-eEE-EEccccCCeEEEEecCCCEEEE--EeCCCCEEEEec
Q psy17902 267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEE-SQL-VFNGHSRGIDMTRRVNDQQFIT--CGEDGTLSLWSI 342 (454)
Q Consensus 267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~-~~~-~~~~~~~~i~~~~~~~~~~l~~--~~~dg~i~iwd~ 342 (454)
..+. +...|.++.++++. ++++ .++.|++||+.+. +.+ .+.. ....+.+.. ..+++ |+.+|.|++||+
T Consensus 95 ~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~-~~la~~sg~~~g~v~iwd~ 166 (355)
T 3vu4_A 95 SRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN-GLLVYSNEFNLGQIHITKL 166 (355)
T ss_dssp EEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET-TEEEEEESSCTTCEEEEEC
T ss_pred EEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc-cEEEEeCCCcCcEEEEEEC
Confidence 8876 67799999998754 4433 4789999999987 444 2222 222333333 66665 579999999999
Q ss_pred CCCcc----------------ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc-EEEEEcCCCceeeEeccC
Q psy17902 343 LKKVP----------------THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC-VKLWKITPKRTLEFLQDI 405 (454)
Q Consensus 343 ~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-v~iwd~~~~~~~~~~~~~ 405 (454)
.++.. +..+. .|...|++++|+|+|.+|++|+.||+ |++||+.+++.+..+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~---------~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 167 QSSGSATTQDQGVQQKAILGKGVLIK---------AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp CC------------------CCEEEC---------CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred CCCCccccccccccccccCcccEEEE---------ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 87651 23332 36667999999999999999999998 999999999998888732
Q ss_pred CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 406 PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 406 ~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
.|.+.|++++|+|+|++|+++ +.|+.|++|+...+.
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~-s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVV-SDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEE-ETTCEEEEEESSCCS
T ss_pred CCCCcEEEEEECCCCCEEEEE-ECCCEEEEEEccCCC
Confidence 377899999999999999998 899999999986543
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.8e-30 Score=225.52 Aligned_cols=275 Identities=13% Similarity=0.149 Sum_probs=183.6
Q ss_pred eEEEEEcCCCC---EEEEEeCCCeEEEEEcCCC---ceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCC-cEEE
Q psy17902 145 ITCIAVTSDSK---HVYSACKDGIIIKWLLETR---SKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNS-NIKL 216 (454)
Q Consensus 145 V~~~~~s~~~~---~l~~~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg-~v~v 216 (454)
+.++.|-..+- .+++++. ..|++|+..+. +...+.. .|..+|..+.+.|+.. ++.++-.+= .-.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v 114 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWH------FAEVPVLQIVPVPDVYNLVCVALGNLEIREI 114 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEE------CCSSCEEEECCCTTCCSCEEEEECSSSEEEE
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEe------ccCceeEEEEEcCcccceeeeeeccccccce
Confidence 45555644333 6777776 68999999987 5555555 3666788888877543 222221111 1111
Q ss_pred EeC----C---CccEEeecccCCCeEEEEEcCCCCEEEEEe--CCCcEEEEeC-CCceeEEEeeccCCceeEEEeec---
Q psy17902 217 WSS----S---LEHLHTFTGHKAPITGLAISFECDTLYSSS--NDRSIKVWNI-EDRAYVETLFGHQSAITSLDILA--- 283 (454)
Q Consensus 217 w~~----~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~-~~~~~~~~~~~~~~~v~~~~~~~--- 283 (454)
+.+ + ........+|...|.++ ++++++.+++ .|+.|++|++ .+++.+..+.+|...++.++|++
T Consensus 115 ~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g 191 (356)
T 2w18_A 115 RALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQG 191 (356)
T ss_dssp EEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEET
T ss_pred EEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCC
Confidence 211 1 01111223344444443 4565555543 5999999999 55888888889999999999999
Q ss_pred CCCEEEEeeCCCcEEEeeccCCeEE-EEccccC---CeEEEE-ecCCCEE------------EEEeCCCCEEEEecCCCc
Q psy17902 284 KNRVISSGGTDKSVRVWKIQEESQL-VFNGHSR---GIDMTR-RVNDQQF------------ITCGEDGTLSLWSILKKV 346 (454)
Q Consensus 284 ~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~---~i~~~~-~~~~~~l------------~~~~~dg~i~iwd~~~~~ 346 (454)
++.+|++++.|++|+|||+.+++.+ .+.+|.. .+.++. .+++.++ ++|+.|++|++||..+++
T Consensus 192 ~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 192 MQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp STTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred CCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 7799999999999999999999877 5544432 343333 4444444 567889999999999998
Q ss_pred cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceee-eEEEEcCCCCEEEE
Q psy17902 347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI-NSLVFTSDHKHLVA 425 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v-~~l~~s~d~~~l~~ 425 (454)
.+..+.... ..+|...+.+..+ ++.++|+|+.||+|+|||+.+++.+..+.. |...+ .+++|||||++|++
T Consensus 272 ~l~v~~~~~----p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~g--H~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 272 SVGVMLYCL----PPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPP--VSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp EEEEEEECC----CTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECC--C--CCCCEEEECSSSSEEEE
T ss_pred EEEEEEeec----cCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecC--CCCCeEEEEEECCCCCEEEE
Confidence 876653221 0112323433333 488999999999999999999999999876 65554 46899999999999
Q ss_pred EecCCCceeeeee
Q psy17902 426 GIGTEHRFGRWKT 438 (454)
Q Consensus 426 ~~~~d~~i~~W~~ 438 (454)
| +.|++|++|+.
T Consensus 344 G-S~D~TIklWd~ 355 (356)
T 2w18_A 344 G-QKDGNIFVYHY 355 (356)
T ss_dssp E-CTTSCEEEEEE
T ss_pred E-ECCCcEEEecC
Confidence 9 89999999985
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-30 Score=241.65 Aligned_cols=231 Identities=11% Similarity=0.017 Sum_probs=181.9
Q ss_pred CCCceEEEEEeCCCcEEEEecCCCcEE------------------------------EEeCCCccEEeecccCCCeEEEE
Q psy17902 189 SYPPILALAVANNNELVASGDNNSNIK------------------------------LWSSSLEHLHTFTGHKAPITGLA 238 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~------------------------------vw~~~~~~~~~~~~~~~~v~~~~ 238 (454)
....|.+++|+|||+++|+++.|++|+ +|+..+..+..+ .|...|.+++
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~-~~~~~V~~va 92 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNS-QPVCYPRVCK 92 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTT-SCSCCEEEEE
T ss_pred hhccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeec-CCCCcEEEEE
Confidence 345788888888888888888888873 121121122222 4578899999
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC-----ceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE------
Q psy17902 239 ISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS-----AITSLDILAKNRVISSGGTDKSVRVWKIQEESQ------ 307 (454)
Q Consensus 239 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------ 307 (454)
|+|+|.+|++++.||.|++||... ++..+. |.. .|.+++|+|+|++|++|+.||+|++||+.++..
T Consensus 93 wSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i 169 (588)
T 2j04_A 93 PSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFY 169 (588)
T ss_dssp ECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCE
T ss_pred ECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccce
Confidence 999999999999999999999654 566666 665 499999999999999999999999999998752
Q ss_pred -E-EE----ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc---eeeecccCCCCCCCCCCcEEEEEEecCCCE
Q psy17902 308 -L-VF----NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT---HTIPVAHGYDSSSSEPNWITSVACLHNSDL 378 (454)
Q Consensus 308 -~-~~----~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 378 (454)
+ .+ .+|...|.++.|+++. +++++.|++|++||+..+... .++... |...|.+++|+ |.+
T Consensus 170 ~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~--------h~~~V~svaFs--g~~ 238 (588)
T 2j04_A 170 FESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNA--------SRRKITDLKIV--DYK 238 (588)
T ss_dssp EEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECC--------CSSCCCCEEEE--TTE
T ss_pred eeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeeccc--------ccCcEEEEEEE--CCE
Confidence 2 43 6677899999888877 999999999999999887642 333222 33449999999 689
Q ss_pred EEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEE--cCCCCEEEEEecCCCceeeeeee
Q psy17902 379 VASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF--TSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 379 l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~--s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
||+++ +++|++||+.++.......+ |.+.|.+++| +||+..|+++ +.+|. ++|...
T Consensus 239 LASa~-~~tIkLWd~~~~~~~~~~~g--h~~~V~~va~~~s~d~~~La~a-~edG~-klw~~d 296 (588)
T 2j04_A 239 VVLTC-PGYVHKIDLKNYSISSLKTG--SLENFHIIPLNHEKESTILLMS-NKTSY-KVLLED 296 (588)
T ss_dssp EEEEC-SSEEEEEETTTTEEEEEECS--CCSCCCEEEETTCSSCEEEEEC-SSCEE-EEEESS
T ss_pred EEEEe-CCeEEEEECCCCeEEEEEcC--CCceEEEEEeeeCCCCCEEEEE-cCCCC-EEEeec
Confidence 99887 69999999998766333333 8899999999 9999888888 78899 888764
No 124
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.8e-30 Score=236.64 Aligned_cols=232 Identities=9% Similarity=0.032 Sum_probs=181.5
Q ss_pred EeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---------CceeEE
Q psy17902 198 VANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---------DRAYVE 267 (454)
Q Consensus 198 ~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---------~~~~~~ 267 (454)
+.+++.+|++|+.||.|++||+ ++..+..+. ...|.++.|+|+ +++++.|++|++|+.. ++..+.
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~ 118 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLR 118 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeE
Confidence 4457889999999999999999 666666665 567888889887 9999999999999765 444444
Q ss_pred Eee-ccCCceeEEEeec--CCCEEEEeeCCCcEEEeeccCCeEEEE--ccccCCeEEEEec-CCCEEEEEeCCCCEEEEe
Q psy17902 268 TLF-GHQSAITSLDILA--KNRVISSGGTDKSVRVWKIQEESQLVF--NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWS 341 (454)
Q Consensus 268 ~~~-~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd 341 (454)
.+. +|...|.+++|+| ++++|++++.||.|++||++++..... ..+...+.++.+. ++.+|++|+.||.|++||
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd 198 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYN 198 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 443 6778999999999 999999999999999999999888633 2344467666655 567888999999999999
Q ss_pred cCCCccc-eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC-Cceeee--EEEEc
Q psy17902 342 ILKKVPT-HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-LSGVIN--SLVFT 417 (454)
Q Consensus 342 ~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~--~l~~s 417 (454)
++++..+ ..+.. .|...|++++|+|++.+|++++ ++.|++||+.++..+..+.... +...+. +++|+
T Consensus 199 ~~~~~~~~~~~~~--------~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T 3lrv_A 199 LSSPDQASSRFPV--------DEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDID 269 (343)
T ss_dssp SSCTTSCCEECCC--------CTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEEC
T ss_pred CCCCCCCccEEec--------cCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEEC
Confidence 9998876 55543 1455699999999999999999 5599999999887665544311 223343 69999
Q ss_pred CCCCEEEEEecCCCceeeeeeeCCCe
Q psy17902 418 SDHKHLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 418 ~d~~~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
|+|++|+++++.|+.|++|+.....+
T Consensus 270 ~~g~~l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 270 DSGKNMIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCCEEEEecCCCCcEEEEEEccccc
Confidence 99999999955599999998865543
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=7.6e-29 Score=234.69 Aligned_cols=281 Identities=10% Similarity=0.041 Sum_probs=217.2
Q ss_pred CCCCeEEEE---EcCCCCEEEEEeC--------------CCeEEEEEcCC--C--ceecccCCcccCCCCCCceEEEEEe
Q psy17902 141 HRASITCIA---VTSDSKHVYSACK--------------DGIIIKWLLET--R--SKVCSSPFVKTDRKSYPPILALAVA 199 (454)
Q Consensus 141 h~~~V~~~~---~s~~~~~l~~~~~--------------dg~i~iwd~~~--~--~~~~~~~~~~~~~~~~~~v~~~~~~ 199 (454)
....+..++ |+|+++.+++.+. ++.+.||.++. + .....+. ....+.+++|+
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~-------~~~~~~~~~~s 131 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFK-------TGFQPKSVRFI 131 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEE-------CSSCBCCCEES
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEc-------CCCCceEEEEe
Confidence 445678888 8888776665432 23224444432 3 2222222 22356689999
Q ss_pred CCCcEEEEecCCCcEEEEeC-CCccEE-----eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902 200 NNNELVASGDNNSNIKLWSS-SLEHLH-----TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ 273 (454)
Q Consensus 200 ~~~~~l~~~~~dg~v~vw~~-~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 273 (454)
|++.++++++.++.|++||+ ++..+. .+.+|...|.+++|++++.++++++.|+.|++||+.+++.+..+..|.
T Consensus 132 ~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~ 211 (433)
T 3bws_A 132 DNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG 211 (433)
T ss_dssp SSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS
T ss_pred CCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC
Confidence 98888888888999999999 455555 345788999999999999999999999999999999999998888899
Q ss_pred CceeEEEeecCCCEEE-EeeCCCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEe--------CCCCEEEEecC
Q psy17902 274 SAITSLDILAKNRVIS-SGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCG--------EDGTLSLWSIL 343 (454)
Q Consensus 274 ~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~--------~dg~i~iwd~~ 343 (454)
..+.+++|+|++++++ +++.++.|++||++++...........+..+.+. ++..+++++ .||.|++||+.
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 9999999999998875 5557999999999998887444444456655554 566888877 48899999999
Q ss_pred CCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902 344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH 422 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~ 422 (454)
+++.+..+... ..+.+++|+|+++ ++++++.++.|++||+.+++.+..+. +...+.+++|+|+|++
T Consensus 292 ~~~~~~~~~~~----------~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~ 358 (433)
T 3bws_A 292 KEKLIDTIGPP----------GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP---VFDKPNTIALSPDGKY 358 (433)
T ss_dssp TTEEEEEEEEE----------ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSE
T ss_pred CCcEEeeccCC----------CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec---CCCCCCeEEEcCCCCE
Confidence 88777665322 2388999999997 55667899999999999888777665 5667899999999999
Q ss_pred EEEEecC--------------CCceeeeeeeCC
Q psy17902 423 LVAGIGT--------------EHRFGRWKTIKG 441 (454)
Q Consensus 423 l~~~~~~--------------d~~i~~W~~~~~ 441 (454)
|++++.. ||.|++|+..++
T Consensus 359 l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~ 391 (433)
T 3bws_A 359 LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD 391 (433)
T ss_dssp EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT
T ss_pred EEEEecCCCccccccccccccceEEEEEECCCC
Confidence 9888544 569999998654
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.3e-29 Score=222.80 Aligned_cols=248 Identities=14% Similarity=0.091 Sum_probs=170.1
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCC-eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSK-HVYSACKDG-IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD 209 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 209 (454)
...++.+ |..+|..+.+.||.. ++.++-.+= .-.++-+.-...-..+.......++...|..+ ++++++.+++
T Consensus 78 ~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l---~~g~lv~ss~ 152 (356)
T 2w18_A 78 KLYTWHF--AEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLGL---TKRRLVSSSG 152 (356)
T ss_dssp EEEEEEC--CSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEEE---TTTEEEEEES
T ss_pred eeEEEec--cCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEec---CCCcEEEecc
Confidence 6777888 998899888888643 222222110 00111111000000000000000122233332 4666666643
Q ss_pred --CCCcEEEEeC--CCccEEeecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCceeEEEeeccC---CceeEE
Q psy17902 210 --NNSNIKLWSS--SLEHLHTFTGHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ---SAITSL 279 (454)
Q Consensus 210 --~dg~v~vw~~--~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---~~v~~~ 279 (454)
.|+.|++|++ +++.+..+..|...++.++|++ ++.+|++|+.|++|+|||+.+++++.++.+|. ..+.++
T Consensus 153 ~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 153 TLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHK 232 (356)
T ss_dssp SSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEE
T ss_pred cCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEE
Confidence 5899999998 4677788889999999999999 77999999999999999999999999998654 357778
Q ss_pred EeecCCCEE------------EEeeCCCcEEEeeccCCeEEEE------ccccCCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902 280 DILAKNRVI------------SSGGTDKSVRVWKIQEESQLVF------NGHSRGIDMTRRVNDQQFITCGEDGTLSLWS 341 (454)
Q Consensus 280 ~~~~~~~~l------------~~~~~dg~i~i~d~~~~~~~~~------~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd 341 (454)
+|+|++.++ ++|+.|++|++||..+++.+.. .+|...+....+ .+..+++++.|++|+|||
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~-sg~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV-KDHCAAAILTSGTIAIWD 311 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE-ETTEEEEEETTSCEEEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc-CCCEEEEEcCCCcEEEEE
Confidence 999999876 5678899999999999887632 244433322222 266889999999999999
Q ss_pred cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902 342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~ 393 (454)
+.+++++.++..+.. ..+.+++|+|+|++|++|+.|++|+|||+
T Consensus 312 l~tGk~l~tL~gH~~--------~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQCTALLPPVSD--------QHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSEEEEECCC----------CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEecCCCC--------CeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999998864321 12456899999999999999999999996
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.96 E-value=4.1e-27 Score=227.39 Aligned_cols=281 Identities=9% Similarity=0.036 Sum_probs=216.7
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEc--CCCceecccCCcccCCCCCCceEEEEEeC----CCcEEEEecC-CCcEEEE
Q psy17902 145 ITCIAVTSDSKHVYSACKDGIIIKWLL--ETRSKVCSSPFVKTDRKSYPPILALAVAN----NNELVASGDN-NSNIKLW 217 (454)
Q Consensus 145 V~~~~~s~~~~~l~~~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-dg~v~vw 217 (454)
+.+++|+|+|++|++++.|+.|.+||+ .+++.+..+. +...+..++|+| +|++|++++. +++|.||
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~-------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~ 253 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK-------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIM 253 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEE
Confidence 899999999999999999999999999 7777665554 334689999999 9999999885 8999999
Q ss_pred eC-CCccEEeecc----------cCC-CeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEE--EeeccCCceeEEEee
Q psy17902 218 SS-SLEHLHTFTG----------HKA-PITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVE--TLFGHQSAITSLDIL 282 (454)
Q Consensus 218 ~~-~~~~~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~ 282 (454)
|. +.+.+..+.. |.. .+.++.++|++.. +++...++.|.+||+.+.+.+. .+ .+...+.++.|+
T Consensus 254 D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~s 332 (543)
T 1nir_A 254 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWD 332 (543)
T ss_dssp ETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEEC
T ss_pred eccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceEC
Confidence 99 6677766654 223 7889999997665 5566678999999998765443 33 466778899999
Q ss_pred cCCCEEEEe-eCCCcEEEeeccCCeEE-EEcc----ccCCeEEEEecCCC-EEEEEe-CCCCEEEEecCC-------Ccc
Q psy17902 283 AKNRVISSG-GTDKSVRVWKIQEESQL-VFNG----HSRGIDMTRRVNDQ-QFITCG-EDGTLSLWSILK-------KVP 347 (454)
Q Consensus 283 ~~~~~l~~~-~~dg~i~i~d~~~~~~~-~~~~----~~~~i~~~~~~~~~-~l~~~~-~dg~i~iwd~~~-------~~~ 347 (454)
|++++|+++ ..+++|.+||+.+++.. .+.. |......+..+++. .++++. .|++|.+||+.+ .+.
T Consensus 333 pdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~ 412 (543)
T 1nir_A 333 SSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK 412 (543)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE
T ss_pred CCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeE
Confidence 999977655 45889999999999877 3332 44333333455534 455554 589999999988 777
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-------CCCcEEEEEcCCCcee-eEecc------CCCceeeeE
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-------YDGCVKLWKITPKRTL-EFLQD------IPLSGVINS 413 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-------~dg~v~iwd~~~~~~~-~~~~~------~~~~~~v~~ 413 (454)
++++.... ..+..++++|++++|++++ .+++|.+||+.+++.. ..+.- ..+...+..
T Consensus 413 v~~l~~~g---------~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 483 (543)
T 1nir_A 413 VAELQGQG---------GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQ 483 (543)
T ss_dssp EEEEECSC---------SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEE
T ss_pred EEEEEcCC---------CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEe
Confidence 78777532 3367799999999999987 2679999999998766 44311 124678999
Q ss_pred EEEcCCCCEEEEEec----CCCceeeeeeeCCC
Q psy17902 414 LVFTSDHKHLVAGIG----TEHRFGRWKTIKGV 442 (454)
Q Consensus 414 l~~s~d~~~l~~~~~----~d~~i~~W~~~~~~ 442 (454)
+.|+|+|+.|+++.. .++.|.+||..++.
T Consensus 484 ~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 484 PEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp EEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 999999999998743 47999999987764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=7.2e-28 Score=225.88 Aligned_cols=280 Identities=8% Similarity=-0.021 Sum_probs=210.7
Q ss_pred CCCeEEEEEcCCCC-EEEEEe----CCC----eEEEEEc--CCCceecccCCcccCCCCCCceEEEEEeC----------
Q psy17902 142 RASITCIAVTSDSK-HVYSAC----KDG----IIIKWLL--ETRSKVCSSPFVKTDRKSYPPILALAVAN---------- 200 (454)
Q Consensus 142 ~~~V~~~~~s~~~~-~l~~~~----~dg----~i~iwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---------- 200 (454)
...|....|++.+. ++++|+ .+| .|++||+ .+++.+....+ .+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~~~~g 137 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSY----KVNKQWLRYAGHTASDEVFEKLTG 137 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEE----EECGGGHHHHHHHHHHHHHHHHHS
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEE----EcChhHHHHHHHHHHHHHHHHHcC
Confidence 34677888888764 666776 467 9999999 88776532111 13444555555553
Q ss_pred ----CCcEEEEecCC------CcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCceeEE
Q psy17902 201 ----NNELVASGDNN------SNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR---SIKVWNIEDRAYVE 267 (454)
Q Consensus 201 ----~~~~l~~~~~d------g~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~ 267 (454)
.+..++.++.+ +.|++||+.+.....+..|...+.+++|+|+|++|++++.++ .|++||+.+++..
T Consensus 138 ~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~- 216 (415)
T 2hqs_A 138 IKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR- 216 (415)
T ss_dssp SCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-
T ss_pred CCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-
Confidence 14555555543 799999998777888889999999999999999999999875 9999999998765
Q ss_pred EeeccCCceeEEEeecCCCEEE-EeeCCCc--EEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeC-CC--CEEEE
Q psy17902 268 TLFGHQSAITSLDILAKNRVIS-SGGTDKS--VRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGE-DG--TLSLW 340 (454)
Q Consensus 268 ~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~-dg--~i~iw 340 (454)
.+..|...+.+++|+|+|+.|+ +++.++. |++||+.++....+..+...+..+.|. ++..|++++. ++ .|.+|
T Consensus 217 ~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 217 QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 5667888999999999999777 6666654 999999998887777787777776665 5667887775 45 57777
Q ss_pred ecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC---CcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902 341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD---GCVKLWKITPKRTLEFLQDIPLSGVINSLVFT 417 (454)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 417 (454)
|+.++... .+.. +...+.+++|+|+|++|++++.+ +.|++||+.++... .+.. + ..+.+++|+
T Consensus 297 d~~~~~~~-~l~~---------~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~--~-~~~~~~~~s 362 (415)
T 2hqs_A 297 NINGGAPQ-RITW---------EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSS--T-FLDETPSLA 362 (415)
T ss_dssp ETTSSCCE-ECCC---------SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCC--S-SSCEEEEEC
T ss_pred ECCCCCEE-EEec---------CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecC--C-CCcCCeEEc
Confidence 88776532 2211 23458899999999999888764 58999999987663 3443 3 278999999
Q ss_pred CCCCEEEEEecCCC--ceeeeeeeC
Q psy17902 418 SDHKHLVAGIGTEH--RFGRWKTIK 440 (454)
Q Consensus 418 ~d~~~l~~~~~~d~--~i~~W~~~~ 440 (454)
|||++|++++..++ .|.+|+...
T Consensus 363 pdg~~l~~~s~~~~~~~l~~~d~~g 387 (415)
T 2hqs_A 363 PNGTMVIYSSSQGMGSVLNLVSTDG 387 (415)
T ss_dssp TTSSEEEEEEEETTEEEEEEEETTS
T ss_pred CCCCEEEEEEcCCCccEEEEEECCC
Confidence 99999998855454 788888653
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=4e-27 Score=238.22 Aligned_cols=290 Identities=10% Similarity=0.005 Sum_probs=217.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-CC-----eEEEEEcCCCceecccCCcccCC------------------CCCCceEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACK-DG-----IIIKWLLETRSKVCSSPFVKTDR------------------KSYPPILAL 196 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~~------------------~~~~~v~~~ 196 (454)
....|.+++|||||++|++++. || .|++||+.+++............ .....|.++
T Consensus 35 ~~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 35 SGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp TCCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 3567999999999999999998 88 99999999887654443211000 000237889
Q ss_pred EEeCCCcEEEEecCCCcEEEEeCCCc---cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902 197 AVANNNELVASGDNNSNIKLWSSSLE---HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ 273 (454)
Q Consensus 197 ~~~~~~~~l~~~~~dg~v~vw~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 273 (454)
+|+|||++|++++. +.|.+||+.+. .+..+..|...+.+++|+|||++|++++. +.|++||+.+++.......+.
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence 99999999999886 99999999655 67778888889999999999999999874 689999999887665544443
Q ss_pred Cc----------------eeEEEeecCCCEEEEeeCCC---------------------------------cEEEeeccC
Q psy17902 274 SA----------------ITSLDILAKNRVISSGGTDK---------------------------------SVRVWKIQE 304 (454)
Q Consensus 274 ~~----------------v~~~~~~~~~~~l~~~~~dg---------------------------------~i~i~d~~~ 304 (454)
.. +.++.|+|+|++|++++.|+ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 32 47899999999999887765 789999988
Q ss_pred -CeEEEEc---cccCCeEEEEecCCCEEEEEeC-----CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902 305 -ESQLVFN---GHSRGIDMTRRVNDQQFITCGE-----DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375 (454)
Q Consensus 305 -~~~~~~~---~~~~~i~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 375 (454)
+....+. .+...+..+.|+++..|++++. +..|++||+.++.....+...... ....+..++|+|+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~-----~~~~~~~~~~spd 347 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPT-----WVPLHNSLRFLDD 347 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSS-----CCCCCSCCEECTT
T ss_pred CCceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCC-----cCCcCCceEECCC
Confidence 7765433 3445555554577787876653 567999999988776655432211 0002457899999
Q ss_pred CCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEE-EEcCCCCEEEEEecCCC--ceeeeeeeC
Q psy17902 376 SDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSL-VFTSDHKHLVAGIGTEH--RFGRWKTIK 440 (454)
Q Consensus 376 ~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l-~~s~d~~~l~~~~~~d~--~i~~W~~~~ 440 (454)
|+++++++.||.++||.+. .+. ...+.. +...|.++ .|+|||+.|+++++.++ .+.+|....
T Consensus 348 g~~~~~~~~~g~~~l~~~~~~~~-~~~l~~--~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 348 GSILWSSERTGFQHLYRIDSKGK-AAALTH--GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp SCEEEEECTTSSCEEEEECSSSC-EEESCC--SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred CeEEEEecCCCccEEEEEcCCCC-eeeeee--cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 9999999999988888876 344 555654 56667777 59999999887756666 889998764
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=6.2e-27 Score=219.49 Aligned_cols=268 Identities=9% Similarity=0.013 Sum_probs=205.3
Q ss_pred ceeEeEeccCCCCCCeEEEEEcC--------------CCCEEEEEeCC------CeEEEEEcCCCceecccCCcccCCCC
Q psy17902 130 TVVCTKFNGKPHRASITCIAVTS--------------DSKHVYSACKD------GIIIKWLLETRSKVCSSPFVKTDRKS 189 (454)
Q Consensus 130 ~~~~~~~~~~~h~~~V~~~~~s~--------------~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~ 189 (454)
......|.+ |...+..+++++ .+..|+.++.+ +.|++||+.... ...+. .|
T Consensus 107 ~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~-~~~l~------~~ 177 (415)
T 2hqs_A 107 VLAQNSYKV--NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYN-QFVVH------RS 177 (415)
T ss_dssp EEEEEEEEE--CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCS-CEEEE------EE
T ss_pred EEeeeEEEc--ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCC-CEEEe------CC
Confidence 334466888 988888888775 15666666654 799999998543 22222 46
Q ss_pred CCceEEEEEeCCCcEEEEecCCC---cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEeCCCc
Q psy17902 190 YPPILALAVANNNELVASGDNNS---NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRS--IKVWNIEDR 263 (454)
Q Consensus 190 ~~~v~~~~~~~~~~~l~~~~~dg---~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~--i~iwd~~~~ 263 (454)
...+.+++|+|+|++|++++.++ .|++||+.......+..|...+.+++|+|+|+.|+ +++.++. |++||+.++
T Consensus 178 ~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~ 257 (415)
T 2hqs_A 178 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 257 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC
T ss_pred CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC
Confidence 77899999999999999998875 99999995555567778889999999999999888 6666655 999999988
Q ss_pred eeEEEeeccCCceeEEEeecCCCEEEEeeC-CC--cEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEEEEeCC---CC
Q psy17902 264 AYVETLFGHQSAITSLDILAKNRVISSGGT-DK--SVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFITCGED---GT 336 (454)
Q Consensus 264 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg--~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~d---g~ 336 (454)
+. ..+..|...+.+++|+|++++|++++. ++ .|++||+.++....+..+...+..+.+ +++.+|++++.+ ..
T Consensus 258 ~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 258 QI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH 336 (415)
T ss_dssp CE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred CE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceE
Confidence 75 566778889999999999998888776 44 678889988776655555555655554 567778777754 58
Q ss_pred EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC---cEEEEEcCCCceeeEeccCCCceeeeE
Q psy17902 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG---CVKLWKITPKRTLEFLQDIPLSGVINS 413 (454)
Q Consensus 337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg---~v~iwd~~~~~~~~~~~~~~~~~~v~~ 413 (454)
|.+||+.++... .+.. + ..+.+++|+|+|++|++++.++ .|++||+. +.....+.. +.+.|.+
T Consensus 337 i~~~d~~~~~~~-~l~~---------~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~--~~~~v~~ 402 (415)
T 2hqs_A 337 IAKQDLATGGVQ-VLSS---------T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPA--TDGQVKF 402 (415)
T ss_dssp EEEEETTTCCEE-ECCC---------S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCC--SSSEEEE
T ss_pred EEEEECCCCCEE-EecC---------C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeC--CCCCCcC
Confidence 999999887653 2221 1 1389999999999999888877 79999987 455666665 7889999
Q ss_pred EEEcCCCC
Q psy17902 414 LVFTSDHK 421 (454)
Q Consensus 414 l~~s~d~~ 421 (454)
++|+|.-.
T Consensus 403 ~~~~~~~~ 410 (415)
T 2hqs_A 403 PAWSPYLH 410 (415)
T ss_dssp EEECCCCC
T ss_pred Cccccccc
Confidence 99999643
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=3.3e-26 Score=221.03 Aligned_cols=279 Identities=9% Similarity=0.022 Sum_probs=215.8
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC---CCccEE
Q psy17902 149 AVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS---SLEHLH 225 (454)
Q Consensus 149 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~---~~~~~~ 225 (454)
+|+|++.++++++.+++|.+||..+++.+..+.. ++ .+..++|+|+|++|++++.++.|.+||+ ++..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~-----g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDT-----GY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEEC-----ST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEec-----Cc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEE
Confidence 4889999999999999999999999988776653 23 3889999999999999999999999999 455566
Q ss_pred eecccCCCeEEEEEcC----CCCEEEEEeC-CCcEEEEeCCCceeEEEeecc----------C-CceeEEEeecCCC-EE
Q psy17902 226 TFTGHKAPITGLAISF----ECDTLYSSSN-DRSIKVWNIEDRAYVETLFGH----------Q-SAITSLDILAKNR-VI 288 (454)
Q Consensus 226 ~~~~~~~~v~~~~~~~----~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~----------~-~~v~~~~~~~~~~-~l 288 (454)
.+. +...+..++|+| +|++|++++. +++|.+||..+++++..+..+ . ..+.++.++|++. ++
T Consensus 217 ~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~ 295 (543)
T 1nir_A 217 EIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFI 295 (543)
T ss_dssp EEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEE
T ss_pred EEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEE
Confidence 666 455679999999 9999999884 899999999999988877642 2 3688999999765 56
Q ss_pred EEeeCCCcEEEeeccCCeEEE--EccccCCeE-EEEecCCCEEEEEe-CCCCEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902 289 SSGGTDKSVRVWKIQEESQLV--FNGHSRGID-MTRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP 364 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~~--~~~~~~~i~-~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 364 (454)
++...++.|.+||+.+...+. ...+...+. ..+.+++.+|++++ .+++|.+||+.+++.+..+..... +|.
T Consensus 296 vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~-----ph~ 370 (543)
T 1nir_A 296 VNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT-----PHP 370 (543)
T ss_dssp EEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS-----BCC
T ss_pred EEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC-----CCC
Confidence 677789999999998754331 222333333 44455677666555 689999999999998888764321 133
Q ss_pred CcEEEEEEecC-CCEEEEec-CCCcEEEEEcCC-------CceeeEeccCCCceeeeEEEEcCCCCEEEEEe--c----C
Q psy17902 365 NWITSVACLHN-SDLVASGS-YDGCVKLWKITP-------KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI--G----T 429 (454)
Q Consensus 365 ~~i~~~~~s~~-~~~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~--~----~ 429 (454)
.....+ ++|+ +.+++++. .|++|.+|++.+ .+.+..+.. +.+.+..++|+|+|++|+++. + .
T Consensus 371 g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~--~g~~~~~v~~~pdg~~l~v~~~~~~~~~~ 447 (543)
T 1nir_A 371 GRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG--QGGGSLFIKTHPKSSHLYVDTTFNPDARI 447 (543)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEEC--SCSCCCCEECCTTCCEEEECCTTCSSHHH
T ss_pred CCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEc--CCCCceEEEcCCCCCcEEEecCCCCCccc
Confidence 323333 5777 66777775 589999999988 788888886 667788999999999999983 1 2
Q ss_pred CCceeeeeeeCCCe
Q psy17902 430 EHRFGRWKTIKGVK 443 (454)
Q Consensus 430 d~~i~~W~~~~~~~ 443 (454)
++.|.+|+..+...
T Consensus 448 ~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 448 SQSVAVFDLKNLDA 461 (543)
T ss_dssp HTCEEEEETTCTTS
T ss_pred CceEEEEECCCCCC
Confidence 67999999876654
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.95 E-value=4.3e-25 Score=202.86 Aligned_cols=268 Identities=10% Similarity=0.036 Sum_probs=208.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACK-------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNS 212 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg 212 (454)
....+..++|+|++++|++++. ++.|.+||..+++....+.. ...+..++|+|++++++ ++..++
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-------DLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-------SSCCCSEEEETTTTEEEEEETTTT
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-------CCCcceEEECCCCCEEEEEecCCC
Confidence 4456889999999999988874 56899999999887766542 23467899999998555 455579
Q ss_pred cEEEEeC-CCccEEeecccCCC---------eEEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEEEeeccCCceeEEE
Q psy17902 213 NIKLWSS-SLEHLHTFTGHKAP---------ITGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVETLFGHQSAITSLD 280 (454)
Q Consensus 213 ~v~vw~~-~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 280 (454)
.|.+||. +++.+..+..+... +.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...+.+++
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 191 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLA 191 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCE
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEE
Confidence 9999999 56666666554322 78899999999888776 478899999999998888765666789999
Q ss_pred eecCCCEEEEeeCCCcEEEeeccCCeEEE-Ecc----ccCCeE-EEEecCCCEEEEEe-CCCCEEEEecCCCccceeeec
Q psy17902 281 ILAKNRVISSGGTDKSVRVWKIQEESQLV-FNG----HSRGID-MTRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~----~~~~i~-~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~ 353 (454)
|+|++++|++++.++.|.+||+.+++... +.. +...+. ..+.++++++++++ .++.|.+||+.+++.+..+..
T Consensus 192 ~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 192 LDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 99999999999999999999999988772 222 233344 34455677666655 459999999999988877764
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT 429 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~ 429 (454)
.. ...++|+|++++++++ ..++.|.+||+.+++.+..+.. ...+.+++|+|||++|+++...
T Consensus 272 ~~-----------~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 272 PE-----------SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp SS-----------CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTTSCEEEEEEEC
T ss_pred CC-----------CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCCCCEEEEEEcc
Confidence 32 2458999999965554 4689999999999988877763 4468999999999988887433
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.2e-25 Score=204.67 Aligned_cols=275 Identities=7% Similarity=0.017 Sum_probs=196.1
Q ss_pred EEcCCCCE-EEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEEEeC-CCcc-E
Q psy17902 149 AVTSDSKH-VYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKLWSS-SLEH-L 224 (454)
Q Consensus 149 ~~s~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~~-~~~~-~ 224 (454)
.|.+++++ +++++.++.|.+||+.+++....+.. +...+ +++|+|++++|++++. ++.|.+||+ ++.. .
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~------~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITL------GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKV 76 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEEC------CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEc------cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeE
Confidence 45665555 66777889999999999887666542 34456 9999999997666655 889999999 5555 6
Q ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCC---cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCCCc-EEE
Q psy17902 225 HTFTGHKAPITGLAISFECDTLYSSSNDR---SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTDKS-VRV 299 (454)
Q Consensus 225 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~-i~i 299 (454)
..+..+..+..+++|+|++++|+++..++ .|.+||+.+++.+..+.. ...+.+++|+|++++|+++ ..++. |.+
T Consensus 77 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 77 VAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred EecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEE
Confidence 66666666666699999999999655553 899999999998877754 4456899999999855544 55588 999
Q ss_pred eeccCCeEE-----EEccccCCeEEEE-ecCCCEEEEE-eCCCCEEEEecCCCcc---ceeeecccCCCCCCCCCCcEEE
Q psy17902 300 WKIQEESQL-----VFNGHSRGIDMTR-RVNDQQFITC-GEDGTLSLWSILKKVP---THTIPVAHGYDSSSSEPNWITS 369 (454)
Q Consensus 300 ~d~~~~~~~-----~~~~~~~~i~~~~-~~~~~~l~~~-~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~i~~ 369 (454)
|++.....+ ...........+. .+++.+++++ ..++.|.+||+.+++. +..+... ..+..
T Consensus 156 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~----------~~~~~ 225 (331)
T 3u4y_A 156 FKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN----------NLPGT 225 (331)
T ss_dssp EEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS----------SCCCC
T ss_pred EEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC----------CCCce
Confidence 998754332 1112222334444 4556655554 4689999999998887 6555532 22678
Q ss_pred EEEecCCCEEEEec-CCCcEEEEEcCCCce--eeEeccC--CCcee---eeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 370 VACLHNSDLVASGS-YDGCVKLWKITPKRT--LEFLQDI--PLSGV---INSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 370 ~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~--~~~~~~~--~~~~~---v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
++|+|+|++|++++ .++.|.+||+.+++. +..+... ....+ +..++|+|||++|++++..++.|.+|+....
T Consensus 226 ~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 226 IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 99999999766554 578899999998865 3333221 01122 3568999999999888778889999997653
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.95 E-value=4.8e-25 Score=201.62 Aligned_cols=273 Identities=11% Similarity=0.148 Sum_probs=187.0
Q ss_pred CEEEEE-eCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-CcEEEEeCC--Ccc---EEe
Q psy17902 155 KHVYSA-CKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-SNIKLWSSS--LEH---LHT 226 (454)
Q Consensus 155 ~~l~~~-~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~v~vw~~~--~~~---~~~ 226 (454)
++++++ +.++.|++|++.. +........ .+...+.+++|+|++++|++++.+ +.|.+|++. ... +..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVV-----DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEE-----ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeE-----ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence 344444 7799999999963 221111111 245578899999999988888876 999999984 333 233
Q ss_pred ecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeC---CCceeEEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEee
Q psy17902 227 FTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNI---EDRAYVETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVWK 301 (454)
Q Consensus 227 ~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d 301 (454)
+..+. .+.+++|+|++++|++++. ++.|.+||+ .....+..+.. ...+.+++|+|++++|++++ .++.|.+||
T Consensus 80 ~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 80 SALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp EECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred cccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 44333 7889999999998877765 888999999 44444444443 34588999999999888777 899999999
Q ss_pred ccC-CeEEE-----Ecc-ccCCeEEEEe-cCCCEEEEEe-CCCCEEEEecCC--Ccc--ceeeecccCCCCCCCCCCcEE
Q psy17902 302 IQE-ESQLV-----FNG-HSRGIDMTRR-VNDQQFITCG-EDGTLSLWSILK--KVP--THTIPVAHGYDSSSSEPNWIT 368 (454)
Q Consensus 302 ~~~-~~~~~-----~~~-~~~~i~~~~~-~~~~~l~~~~-~dg~i~iwd~~~--~~~--~~~~~~~~~~~~~~~~~~~i~ 368 (454)
+.+ +.... ... ....+..+.+ +++.++++++ .++.|.+|++.. +.. ...+.. ..........+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~ 234 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDM---MPENFSDTRWAA 234 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEEC---SCTTCCSCCCEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccc---cCccccccCCcc
Confidence 987 54431 121 2224444444 4566665554 889999999954 322 112211 100001234578
Q ss_pred EEEEecCCCEEE-EecCCCcEEEEEcCC--C--ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 369 SVACLHNSDLVA-SGSYDGCVKLWKITP--K--RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 369 ~~~~s~~~~~l~-~~~~dg~v~iwd~~~--~--~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
.++|+|+|++|+ ++..++.|.+|++.. + +.+..+. ....+.+++|+|+|++|+++...++.|.+|+...
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP---TETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEE---CSSSCCCEEECTTSSEEEEECTTTCEEEEEEEET
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeec---CCCccceEEECCCCCEEEEecCCCCeEEEEEEcC
Confidence 999999998776 555789999999983 2 3333333 2334889999999999999966899999997764
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=7.9e-25 Score=199.64 Aligned_cols=264 Identities=10% Similarity=0.020 Sum_probs=197.3
Q ss_pred CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC-ceEEEEEeCCCcEE-EEecCCCcEEEEeC-CCccEEeecc-c
Q psy17902 155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP-PILALAVANNNELV-ASGDNNSNIKLWSS-SLEHLHTFTG-H 230 (454)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l-~~~~~dg~v~vw~~-~~~~~~~~~~-~ 230 (454)
++|++++.++.|.+||+.+++....+.. ++.. .+..++|+|+++++ +++..++.|.+||+ ++..+..+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI-----ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC-----TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCB
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc-----CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCC
Confidence 5789999999999999998877665542 1211 37789999999765 55566789999999 5555555542 2
Q ss_pred ----CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC
Q psy17902 231 ----KAPITGLAISFECDTLYSSS------------NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD 294 (454)
Q Consensus 231 ----~~~v~~~~~~~~~~~l~~~~------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 294 (454)
...+.+++|+|++++|++++ .++.|.+||+.+++.+..+.. ...+.+++|+|++++|+++ +
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~ 153 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--G 153 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--S
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--C
Confidence 22677899999999999886 579999999999888777654 4567889999999988877 6
Q ss_pred CcEEEeeccCCeEE-EEcccc--CCeEEEEecCCCEEEEEeCC-C-----------------------CEEEEecCCCcc
Q psy17902 295 KSVRVWKIQEESQL-VFNGHS--RGIDMTRRVNDQQFITCGED-G-----------------------TLSLWSILKKVP 347 (454)
Q Consensus 295 g~i~i~d~~~~~~~-~~~~~~--~~i~~~~~~~~~~l~~~~~d-g-----------------------~i~iwd~~~~~~ 347 (454)
+.|++||+.+++.. .+..+. ..+ .+.+++..++..+.. + .|.+||+.+++.
T Consensus 154 ~~i~~~d~~~~~~~~~~~~~~~~~~~--~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 154 RDLHVMDPEAGTLVEDKPIQSWEAET--YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp SSEEEEETTTTEEEEEECSTTTTTTT--BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcEeeeeeccccCCCc--eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 89999999998776 333222 222 233444444333322 2 478999988876
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI 427 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 427 (454)
. .+.... +...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+.. ...+.+++|+|+|++|+++
T Consensus 232 ~-~~~~~~-------~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~- 297 (337)
T 1pby_B 232 A-MREVRI-------MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL---PHSYYSVNVSTDGSTVWLG- 297 (337)
T ss_dssp E-EEEEEE-------CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC---SSCCCEEEECTTSCEEEEE-
T ss_pred e-EeecCC-------CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC---CCceeeEEECCCCCEEEEE-
Confidence 5 333221 22348899999999999888 68999999999887776653 3467899999999999998
Q ss_pred cCCCceeeeeeeCCC
Q psy17902 428 GTEHRFGRWKTIKGV 442 (454)
Q Consensus 428 ~~d~~i~~W~~~~~~ 442 (454)
+.++.|.+|+..++.
T Consensus 298 ~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 298 GALGDLAAYDAETLE 312 (337)
T ss_dssp SBSSEEEEEETTTCC
T ss_pred cCCCcEEEEECcCCc
Confidence 779999999987654
No 136
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=1.4e-24 Score=218.40 Aligned_cols=278 Identities=10% Similarity=0.004 Sum_probs=199.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-S 220 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~ 220 (454)
...|.+++|||+ ..++.+. ++.|++||+.++....... +...+.+++|+|+|++|+++ .++.|++|++ .
T Consensus 81 ~~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~~l~~-------~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 81 AFPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVTYLFD-------TNEETASLDFSPVGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp -CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEEEEEC-------CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBC
T ss_pred ccCceeEEECCC-CeEEEEE-CCEEEEEECCCCceEEccC-------CcccccCCcCCCCCCEEEEE-ECCeEEEEecCc
Confidence 357999999999 6666654 5999999998876543322 34568889999999999986 5799999999 4
Q ss_pred -----CccEEeecccCCC--------------eEEEEEcCCCCEEEEEe-------------------------------
Q psy17902 221 -----LEHLHTFTGHKAP--------------ITGLAISFECDTLYSSS------------------------------- 250 (454)
Q Consensus 221 -----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~------------------------------- 250 (454)
+........+... +.+++|+|||++|++++
T Consensus 151 ~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~ 230 (706)
T 2z3z_A 151 LGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGT 230 (706)
T ss_dssp TTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTS
T ss_pred ccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCC
Confidence 4554444444333 48899999999999987
Q ss_pred --CCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeCCC-----cEEEeeccCC-eEEEEc--cccCC--
Q psy17902 251 --NDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDK-----SVRVWKIQEE-SQLVFN--GHSRG-- 316 (454)
Q Consensus 251 --~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~-~~~~~~--~~~~~-- 316 (454)
.+..|++||+.+++...... .|...+.+++|+|+|++|++++.++ .|++||+.++ ....+. .+...
T Consensus 231 ~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 231 PSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 45789999999887654432 4667899999999999999887775 8999999988 443322 12211
Q ss_pred -eE-EEEec--CCCEEEEEeCCCCEEEEecC-CCccceeeecccCCCCCCCCCCcEEE-EEEecCCCEEEEec-CCC---
Q psy17902 317 -ID-MTRRV--NDQQFITCGEDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITS-VACLHNSDLVASGS-YDG--- 386 (454)
Q Consensus 317 -i~-~~~~~--~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~-~dg--- 386 (454)
+. ..+.+ ++.++++++.+|.++||.+. .+..+..+.. +...+.. ++|+|+|+.|+.++ .++
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~---------~~~~v~~~~~~spdg~~l~~~~~~~~~~~ 381 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK---------GEWEVTNFAGFDPKGTRLYFESTEASPLE 381 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC---------SSSCEEEEEEECTTSSEEEEEESSSCTTC
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC---------CCeEEEeeeEEcCCCCEEEEEecCCCCce
Confidence 12 34455 66677788889999999886 4444444432 2233666 89999998776554 444
Q ss_pred -cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC---CceeeeeeeCCC
Q psy17902 387 -CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE---HRFGRWKTIKGV 442 (454)
Q Consensus 387 -~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d---~~i~~W~~~~~~ 442 (454)
.|..|++.++. ...+. +...+.+++|||||++|+++++.+ +.|.+|+...+.
T Consensus 382 ~~l~~~d~~~~~-~~~l~---~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 382 RHFYCIDIKGGK-TKDLT---PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp BEEEEEETTCCC-CEESC---CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEEEEcCCCC-ceecc---CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 56667776654 33343 456688999999999998875544 569999876553
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.94 E-value=3e-25 Score=198.32 Aligned_cols=254 Identities=11% Similarity=-0.000 Sum_probs=186.2
Q ss_pred EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C-CccEEeeccc-CCCeE
Q psy17902 159 SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-S-LEHLHTFTGH-KAPIT 235 (454)
Q Consensus 159 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~-~~~~~~~~~~-~~~v~ 235 (454)
.++.++.|++||+.++...... .|...|.+++|+|++++|++++ ++.|.+||+ . +........+ ...+.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~-------~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVW-------QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEE-------EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCCcceeEEEEeCCCCceeeec-------cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 3457899999999987765332 3667899999999999999987 789999999 4 4555555455 46789
Q ss_pred EEEEcCCCCEEEEEeC--CC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE-EeeCCCcEEEeecc--CCeEE
Q psy17902 236 GLAISFECDTLYSSSN--DR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS-SGGTDKSVRVWKIQ--EESQL 308 (454)
Q Consensus 236 ~~~~~~~~~~l~~~~~--dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~--~~~~~ 308 (454)
+++|+|++++|++++. ++ .|.+|++.++. ...+..+ ..+.+++|+|++++|+ +++.++.+.+|++. ++...
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce
Confidence 9999999999999983 34 45555555554 3344333 3589999999999776 77889999999864 45555
Q ss_pred EEccccCCeEEEEec-CCCEEEEEe-CCCCEEEEecC-CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902 309 VFNGHSRGIDMTRRV-NDQQFITCG-EDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD 385 (454)
Q Consensus 309 ~~~~~~~~i~~~~~~-~~~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 385 (454)
.+..+...+..+.+. ++..+++++ .++.+.+|++. .+.....+.. +...+.+++|+|+|++|++++.+
T Consensus 167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD---------SAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC---------CSEEEEEEEECTTSSEEEEEEEE
T ss_pred EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec---------CCcccCCeEECCCCCEEEEEEcC
Confidence 666677777776665 566666665 58999999986 3444433322 23458999999999999888766
Q ss_pred -----------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902 386 -----------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 386 -----------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
+.|.+||+.+++.........+...+.+++|+|+|++|++++.+++
T Consensus 238 ~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 238 ADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp TTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred CCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 5699999988765433332226678999999999999998855543
No 138
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=5.9e-25 Score=221.71 Aligned_cols=280 Identities=10% Similarity=0.040 Sum_probs=197.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC---ceEEEEEeCCCcEEEEecCC--------
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP---PILALAVANNNELVASGDNN-------- 211 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d-------- 211 (454)
..+.+++|+|+|+++++ +.||.|++||+.+++....+. .+.. .|.+++|+|||++|++++.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~------~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~ 89 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIE------GKKIESLRAIRYEISPDREYALFSYNVEPIYQHSY 89 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEEC------TTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEec------cccccccccceEEECCCCCEEEEEecCccceeecc
Confidence 34678899999998876 789999999999887655443 2322 48999999999999998764
Q ss_pred -CcEEEEeCCCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce-----------
Q psy17902 212 -SNIKLWSSSLEHLHTFT---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI----------- 276 (454)
Q Consensus 212 -g~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v----------- 276 (454)
+.|.+||+.+.....+. .|...+..++|+|||+.|+.++. +.|++||+.+++.......+...+
T Consensus 90 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 90 TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred eeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 78889999544334443 34455889999999999999886 789999999887766554444333
Q ss_pred -------eEEEeecCCCEEEEeeCCC----------------------------------cEEEeeccCCeE-EEEccc-
Q psy17902 277 -------TSLDILAKNRVISSGGTDK----------------------------------SVRVWKIQEESQ-LVFNGH- 313 (454)
Q Consensus 277 -------~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~-~~~~~~- 313 (454)
.+++|+|+|+.|++++.++ .|++||+.++.. ..+..+
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~ 248 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD 248 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc
Confidence 7899999999999887553 799999988774 344332
Q ss_pred -----cCCeEEEEecC-CCEEEEEeC----CCCEEEEecCCCccceeeecccCCCCCCCCCCcE----EEEEEecCCCEE
Q psy17902 314 -----SRGIDMTRRVN-DQQFITCGE----DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI----TSVACLHNSDLV 379 (454)
Q Consensus 314 -----~~~i~~~~~~~-~~~l~~~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i----~~~~~s~~~~~l 379 (454)
...+..+.+++ +..+++.+. +..|++||+.+++....+...+. .++ ..++|+|+|+.|
T Consensus 249 ~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l 320 (723)
T 1xfd_A 249 DPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE--------AWLHRQNEEPVFSKDGRKF 320 (723)
T ss_dssp CGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS--------SCCCCCCCCCEECTTSCSE
T ss_pred cCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC--------CEEeccCCCceEcCCCCeE
Confidence 34455565555 445545543 35799999998876655433221 112 368999999966
Q ss_pred EE--ecCCC------cEEEEEc-CCCce--eeEeccCCCceeee-EEEEcCCCCEEEEEecCC--CceeeeeeeC
Q psy17902 380 AS--GSYDG------CVKLWKI-TPKRT--LEFLQDIPLSGVIN-SLVFTSDHKHLVAGIGTE--HRFGRWKTIK 440 (454)
Q Consensus 380 ~~--~~~dg------~v~iwd~-~~~~~--~~~~~~~~~~~~v~-~l~~s~d~~~l~~~~~~d--~~i~~W~~~~ 440 (454)
+. +..++ .|.+||+ ..+.. ...+.. ....+. .++|+|||+.|+.++..+ +.+.+|....
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~--~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 321 FFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS--GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp EEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC--SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred EEEEecccCCCcceeEEEEEeccCCCCccceeEeec--CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 64 45666 4666773 33331 444442 223344 479999999998775555 7889998754
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.8e-23 Score=211.54 Aligned_cols=273 Identities=9% Similarity=0.028 Sum_probs=197.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc--eecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRS--KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL 221 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~ 221 (454)
.|.+++|||||++|++++. +.|.+||+.++. ....+. .+...+.+++|+|||++|++++ ++.|++|++.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~------~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLT------HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCC------CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcc------cCCcccccccCCCCCCEEEEEe-CCcEEEEecCC
Confidence 3889999999999999987 999999999872 222222 3566899999999999999987 46999999954
Q ss_pred ccEEee-cccCCC----------------eEEEEEcCCCCEEEEEeCCC-------------------------------
Q psy17902 222 EHLHTF-TGHKAP----------------ITGLAISFECDTLYSSSNDR------------------------------- 253 (454)
Q Consensus 222 ~~~~~~-~~~~~~----------------v~~~~~~~~~~~l~~~~~dg------------------------------- 253 (454)
.....+ ..+... +.+++|+|||++|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 444333 333332 47899999999999988765
Q ss_pred --cEEEEeCCC-ceeEEEee--ccCCceeEEEeecCCCEEEEeeC-----CCcEEEeeccCCeEEE-EccccC----Ce-
Q psy17902 254 --SIKVWNIED-RAYVETLF--GHQSAITSLDILAKNRVISSGGT-----DKSVRVWKIQEESQLV-FNGHSR----GI- 317 (454)
Q Consensus 254 --~i~iwd~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~-~~~~~~----~i- 317 (454)
.|++||+.+ ++...... .|...+.+++| |+|++|++++. +..|++||+.++.... +..+.. .+
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 789999988 77654432 47788999999 99999887654 5689999999987763 333332 12
Q ss_pred EEEEecCCCEEEEEeCCCCEEEEecCC-CccceeeecccCCCCCCCCCCcEEEE-EEecCCCEEE-EecCCC--cEEEEE
Q psy17902 318 DMTRRVNDQQFITCGEDGTLSLWSILK-KVPTHTIPVAHGYDSSSSEPNWITSV-ACLHNSDLVA-SGSYDG--CVKLWK 392 (454)
Q Consensus 318 ~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~-~~~~dg--~v~iwd 392 (454)
...+.+++.++++++.+|.++||.+.. +. ...+.. +...+..+ .|+|+|+.|+ +++.++ .++||+
T Consensus 341 ~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~---------~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH---------GNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp CCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC---------SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred ceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee---------cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 344455677778888899888887752 33 333321 23337777 5999998765 455555 899999
Q ss_pred cCC-CceeeEeccCCCceeeeEEEEcCCCCEEEEEecCC---Cceeeeee
Q psy17902 393 ITP-KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTE---HRFGRWKT 438 (454)
Q Consensus 393 ~~~-~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d---~~i~~W~~ 438 (454)
+.. +.....+.. ...+.+++|||||++|++.++.. ..+.+|+.
T Consensus 411 ~~~~g~~~~~l~~---~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 411 VPLQGGQPQRLSK---APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp EETTCCCCEECCC---SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred EEcCCCCeeeccc---CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 874 454555553 45578999999999998875543 34666654
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=8.2e-24 Score=221.20 Aligned_cols=279 Identities=8% Similarity=0.019 Sum_probs=217.3
Q ss_pred EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC
Q psy17902 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN 211 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 211 (454)
...+.+ |...+.++.|+++ .++++++.+|.+.||.+.. +.....+. .+. .+..++|+|+|++|+++. +
T Consensus 196 ~~~l~~--~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~------~~~-~~~~~~~SpDG~~la~~~-~ 264 (1045)
T 1k32_A 196 FKKIVD--MSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHT------SFT-DYYPRHLNTDGRRILFSK-G 264 (1045)
T ss_dssp EEEEEC--CSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECC------CCC-SSCEEEEEESSSCEEEEE-T
T ss_pred eEECcC--CCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEec------CCC-CcceeeEcCCCCEEEEEe-C
Confidence 344567 9999999999998 6777888889999998653 22222222 122 466779999999998885 8
Q ss_pred CcEEEEeCCCccEEeecc-----------cCCCeEEEEEc-CCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC-ceeE
Q psy17902 212 SNIKLWSSSLEHLHTFTG-----------HKAPITGLAIS-FECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS-AITS 278 (454)
Q Consensus 212 g~v~vw~~~~~~~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~~ 278 (454)
+.|.+|++....+..+.. |...+.+++|+ |+|++|++++ ++.|.+|++.++... .+..|.. .+.+
T Consensus 265 ~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~ 342 (1045)
T 1k32_A 265 GSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVR 342 (1045)
T ss_dssp TEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEE
T ss_pred CEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEe
Confidence 999999995555555544 34578999999 9999999888 789999999887654 4556777 8999
Q ss_pred EEeecCCCEEEEeeCCCcEE-EeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902 279 LDILAKNRVISSGGTDKSVR-VWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG 356 (454)
Q Consensus 279 ~~~~~~~~~l~~~~~dg~i~-i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 356 (454)
++|+ +++.|++++.++.+. +|++.++....+..+...+..+.++ ++.+|++++.++.|++||+.++........
T Consensus 343 ~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~--- 418 (1045)
T 1k32_A 343 RGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS--- 418 (1045)
T ss_dssp ECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---
T ss_pred eeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC---
Confidence 9999 999999888888888 9999888776555666666666554 677899999999999999998876665532
Q ss_pred CCCCCCCCCcEEEEEEecCCCEEEEecCCC----------cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 357 YDSSSSEPNWITSVACLHNSDLVASGSYDG----------CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg----------~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
+...+.+++|+|+|++|++++.++ .|++||+.+++ +..+.. +...+.+++|+|||++|+++
T Consensus 419 ------~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~--~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 419 ------REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT--ENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp ------SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC--SSSBEEEEEECTTSCEEEEE
T ss_pred ------CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC--CCcccCCceEcCCCCEEEEE
Confidence 234478899999999998887654 89999999876 445544 66678899999999999988
Q ss_pred ecCCCceeeeee
Q psy17902 427 IGTEHRFGRWKT 438 (454)
Q Consensus 427 ~~~d~~i~~W~~ 438 (454)
+.++....|+.
T Consensus 490 -s~~~~~~~~~~ 500 (1045)
T 1k32_A 490 -SYRSLDPSPDR 500 (1045)
T ss_dssp -ESCCCCCEECS
T ss_pred -ecccCCcCcch
Confidence 67777777764
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=1.4e-23 Score=219.42 Aligned_cols=285 Identities=10% Similarity=0.070 Sum_probs=218.8
Q ss_pred CCCCeEEEEEc-CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCC-ceEEEEEeCCCcEEEEecCCCcEE-EE
Q psy17902 141 HRASITCIAVT-SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP-PILALAVANNNELVASGDNNSNIK-LW 217 (454)
Q Consensus 141 h~~~V~~~~~s-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~v~-vw 217 (454)
|...|.+++|+ |+|++|++++ ++.|.+|++.++.... +. .+.. .+..++|+ +|+.|++++.++.+. +|
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~------~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~ 364 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VP------EPLRIRYVRRGGD-TKVAFIHGTREGDFLGIY 364 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CS------CCSCEEEEEECSS-SEEEEEEEETTEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-cc------CCCcceEEeeeEc-CCCeEEEEECCCceEEEE
Confidence 34579999999 9999999988 7899999998766443 22 3555 79999999 999999988888888 88
Q ss_pred eCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC--
Q psy17902 218 SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK-- 295 (454)
Q Consensus 218 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-- 295 (454)
++.+.....+..|...+.+++|+|+|++|++++.++.|++||+.+++....+.+|...+.+++|+|+|++|++++.++
T Consensus 365 d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~ 444 (1045)
T 1k32_A 365 DYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHG 444 (1045)
T ss_dssp ETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSS
T ss_pred ECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccc
Confidence 996666666668888999999999999999999999999999999988777778999999999999999998887654
Q ss_pred --------cEEEeeccCCeEEEEccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCccc-------eeeecc-----
Q psy17902 296 --------SVRVWKIQEESQLVFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPT-------HTIPVA----- 354 (454)
Q Consensus 296 --------~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~----- 354 (454)
.|++||+.++....+..+...+..+. .+++.+|++++.++...+|+....... ..+...
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN 524 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCC
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCC
Confidence 89999999988666777766665554 456778999998888888876433210 000000
Q ss_pred ------------------c----CCCCCCCCCCcEEEEEEecCCCEEEE-------------ecCCCcEEEEEcCCCcee
Q psy17902 355 ------------------H----GYDSSSSEPNWITSVACLHNSDLVAS-------------GSYDGCVKLWKITPKRTL 399 (454)
Q Consensus 355 ------------------~----~~~~~~~~~~~i~~~~~s~~~~~l~~-------------~~~dg~v~iwd~~~~~~~ 399 (454)
. .......+...+..++++|+|.++++ ......|.+||+.+++..
T Consensus 525 ~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~ 604 (1045)
T 1k32_A 525 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT 604 (1045)
T ss_dssp GGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE
T ss_pred ccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE
Confidence 0 00011124466899999999987775 122457888898887643
Q ss_pred eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 400 EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 400 ~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
. +. ..+.+++|||||++|+++ +.+ .|++|+..++.
T Consensus 605 ~-l~-----~~v~~~~~S~DG~~l~~~-~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 605 E-VK-----NNLTDLRLSADRKTVMVR-KDD-GKIYTFPLEKP 639 (1045)
T ss_dssp E-EE-----EEEEEEEECTTSCEEEEE-ETT-SCEEEEESSCT
T ss_pred E-ee-----cCcceEEECCCCCEEEEE-cCC-cEEEEeCccCc
Confidence 2 22 568899999999999988 444 89999997765
No 142
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=4.5e-23 Score=193.90 Aligned_cols=203 Identities=15% Similarity=0.106 Sum_probs=153.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee----------cccCCcccCCCCCCceEEEEEeCCCcEEE----
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV----------CSSPFVKTDRKSYPPILALAVANNNELVA---- 206 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~---- 206 (454)
+...++.+++++++.+|++++.+| +++|+....... ...... ....+...|.+++|+|++++|+
T Consensus 35 ~~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 35 PKERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQG-LLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CCSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCC-EEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcc-ccccCCCcccEEEEcCCCCEEEEEEe
Confidence 445689999999999999999988 888875421110 000000 0012455799999999999999
Q ss_pred EecCCCcEEEEeCC-C--------c---cEEeecccCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902 207 SGDNNSNIKLWSSS-L--------E---HLHTFTGHKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ 273 (454)
Q Consensus 207 ~~~~dg~v~vw~~~-~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 273 (454)
+|+.|+.|+|||+. . . .+..+.+|...|.+++|+|+ +.+|++++.||+|++||++++..+....+|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 78889999999982 2 1 14556779999999999997 7899999999999999999987777777899
Q ss_pred CceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccc-------cCCeEEEEecCCCEEEEE--eCCCC------EE
Q psy17902 274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH-------SRGIDMTRRVNDQQFITC--GEDGT------LS 338 (454)
Q Consensus 274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~i~~~~~~~~~~l~~~--~~dg~------i~ 338 (454)
..|++++|+|+|++|++|+.||.|++||++......+..+ ...+..+.|.+...++++ +.+|. ++
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~ 272 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVV 272 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceE
Confidence 9999999999999999999999999999983222233332 225666777666655533 24433 89
Q ss_pred EEecCCC
Q psy17902 339 LWSILKK 345 (454)
Q Consensus 339 iwd~~~~ 345 (454)
+|++...
T Consensus 273 i~~l~~~ 279 (434)
T 2oit_A 273 MALLPKK 279 (434)
T ss_dssp EEECCCT
T ss_pred EEEeccC
Confidence 9999865
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.93 E-value=4.1e-23 Score=208.29 Aligned_cols=282 Identities=9% Similarity=-0.005 Sum_probs=193.7
Q ss_pred eEeccCCCCC---CeEEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC
Q psy17902 134 TKFNGKPHRA---SITCIAVTSDSKHVYSACKD---------GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN 201 (454)
Q Consensus 134 ~~~~~~~h~~---~V~~~~~s~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 201 (454)
..+.+ |.. .|.+++|||||++|++++.+ +.|.+||+.++.... +.. ...+...+..++|+||
T Consensus 51 ~~~~~--~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~---~~~~~~~~~~~~~SPd 124 (723)
T 1xfd_A 51 VLIEG--KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS-LDP---PEVSNAKLQYAGWGPK 124 (723)
T ss_dssp EEECT--TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE-CCC---TTCCSCCCSBCCBCSS
T ss_pred EEecc--ccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe-ccC---CccccccccccEECCC
Confidence 34445 554 49999999999999999864 788999999876521 111 1134445889999999
Q ss_pred CcEEEEecCCCcEEEEeC-CCccEEeecccCCCe------------------EEEEEcCCCCEEEEEeCCC---------
Q psy17902 202 NELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPI------------------TGLAISFECDTLYSSSNDR--------- 253 (454)
Q Consensus 202 ~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v------------------~~~~~~~~~~~l~~~~~dg--------- 253 (454)
|++||+++. +.|++|++ .+........+...+ .+++|+|||+.|++++.++
T Consensus 125 G~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 125 GQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp TTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEEC
T ss_pred CCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEee
Confidence 999999886 79999999 444444444433333 7899999999999987553
Q ss_pred -------------------------cEEEEeCCCceeEEEeecc------CCceeEEEeecCCCEEEEeeC----CCcEE
Q psy17902 254 -------------------------SIKVWNIEDRAYVETLFGH------QSAITSLDILAKNRVISSGGT----DKSVR 298 (454)
Q Consensus 254 -------------------------~i~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~----dg~i~ 298 (454)
.|++||+.+++....+..+ ...+.+++|+|+|++|++.+. +..|+
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~ 283 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILT 283 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEE
Confidence 7999999988765555543 677899999999998876643 35799
Q ss_pred EeeccCCeEEEE-cc-ccCCe-----EEEEecCCCEEEE--EeCCC------CEEEEec-CCCcc--ceeeecccCCCCC
Q psy17902 299 VWKIQEESQLVF-NG-HSRGI-----DMTRRVNDQQFIT--CGEDG------TLSLWSI-LKKVP--THTIPVAHGYDSS 360 (454)
Q Consensus 299 i~d~~~~~~~~~-~~-~~~~i-----~~~~~~~~~~l~~--~~~dg------~i~iwd~-~~~~~--~~~~~~~~~~~~~ 360 (454)
+||+.+++.... .. +...+ ...+.+++..|+. +..++ .|.+||+ ..+.. ...+...
T Consensus 284 ~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~------ 357 (723)
T 1xfd_A 284 LCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG------ 357 (723)
T ss_dssp EEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS------
T ss_pred EEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC------
Confidence 999998876632 22 22222 3445566776664 44666 5677773 33331 3333211
Q ss_pred CCCCCcEEE-EEEecCCCEEEEecCC---CcEEEEEcCCCc--eeeEecc-CCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902 361 SSEPNWITS-VACLHNSDLVASGSYD---GCVKLWKITPKR--TLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 361 ~~~~~~i~~-~~~s~~~~~l~~~~~d---g~v~iwd~~~~~--~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
...+.. ++|+|+|+.|+..+.+ +.++||++.... ....+.. ..+...+..++|+|||++|+..++...
T Consensus 358 ---~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 432 (723)
T 1xfd_A 358 ---DWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPG 432 (723)
T ss_dssp ---SSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSS
T ss_pred ---CeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCC
Confidence 111444 6999999988766554 789999986532 2333332 114566889999999999998755544
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=3.3e-23 Score=189.37 Aligned_cols=264 Identities=9% Similarity=0.103 Sum_probs=177.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC-CeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCcEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKD-GIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSNIKL 216 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~v~v 216 (454)
|...+.+++|+|++++|++++.+ +.|.+|++. ++........ .....+..++|+|++++|++++. ++.|.+
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES-----ALPGSLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE-----ECSSCCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccc-----ccCCCCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 77789999999999999998887 999999997 4443211111 11226889999999998866654 789999
Q ss_pred EeC-CC---ccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCC-ceeEE----Eeec-cCCceeEEEeecCC
Q psy17902 217 WSS-SL---EHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIED-RAYVE----TLFG-HQSAITSLDILAKN 285 (454)
Q Consensus 217 w~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~~~~~----~~~~-~~~~v~~~~~~~~~ 285 (454)
|++ .+ ..+..+. ....+.+++|+|++++|++++ .++.|.+||+.+ ++... .+.. ....+.+++|+|++
T Consensus 111 ~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg 189 (343)
T 1ri6_A 111 TRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNE 189 (343)
T ss_dssp EEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTS
T ss_pred EECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCC
Confidence 998 22 2233333 344688999999999888887 899999999987 54432 2222 34578899999999
Q ss_pred CEEEEe-eCCCcEEEeeccC--CeEE---EEcc---c---cCCeEEEEe-cCCCEEEE-EeCCCCEEEEecCC--C--cc
Q psy17902 286 RVISSG-GTDKSVRVWKIQE--ESQL---VFNG---H---SRGIDMTRR-VNDQQFIT-CGEDGTLSLWSILK--K--VP 347 (454)
Q Consensus 286 ~~l~~~-~~dg~i~i~d~~~--~~~~---~~~~---~---~~~i~~~~~-~~~~~l~~-~~~dg~i~iwd~~~--~--~~ 347 (454)
++|+++ ..++.|.+|++.. +... .... . ...+..+.+ +++.+|++ +..++.|.+|++.. + ..
T Consensus 190 ~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~ 269 (343)
T 1ri6_A 190 QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSK 269 (343)
T ss_dssp SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEE
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEE
Confidence 976554 4789999999953 3221 1111 1 112333444 45666664 44789999999973 2 23
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcC--CCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKIT--PKRTLEFLQDIPLSGVINSLVFTSDHK 421 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~--~~~~~~~~~~~~~~~~v~~l~~s~d~~ 421 (454)
+..+... ..+..++|+|+|++|++++ .++.|.+|++. ++.. ..+...+......+++|.|+.+
T Consensus 270 ~~~~~~~----------~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~-~~~~~~~~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 270 EGFQPTE----------TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL-HEKGRYAVGQGPMWVVVNAHEG 335 (343)
T ss_dssp EEEEECS----------SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE-EEEEEEECSSSCCEEEEEEEC-
T ss_pred eeeecCC----------CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee-eEccccccCCCCeeEEEEcccC
Confidence 3333221 1167899999999887777 68999999664 4432 2222222334567788877643
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.92 E-value=1.2e-22 Score=186.29 Aligned_cols=276 Identities=12% Similarity=0.092 Sum_probs=179.7
Q ss_pred EEEEEe----CCCeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---CCcEEEEeCCCc---c
Q psy17902 156 HVYSAC----KDGIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---NSNIKLWSSSLE---H 223 (454)
Q Consensus 156 ~l~~~~----~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~v~vw~~~~~---~ 223 (454)
.|++|+ .++.|.+|.++. +........ .+...+..++|+|+|+ |++++. ++.|.+|++... .
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg~~~~~~~~-----~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~ 77 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAKTLTNDGLL-----AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK 77 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTTEEEEEEEE-----EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCCeEEEeeee-----eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEE
Confidence 455553 245677777654 332221111 2334677899999999 555543 689999999333 3
Q ss_pred EEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCC-c--eeEEEeec---------cCCceeEEEeecCCCEEEE
Q psy17902 224 LHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIED-R--AYVETLFG---------HQSAITSLDILAKNRVISS 290 (454)
Q Consensus 224 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~-~--~~~~~~~~---------~~~~v~~~~~~~~~~~l~~ 290 (454)
+..+..+...+..++|+|++++|++++ .++.|.+|++.. + ..+..+.. +...+.+++|+|+++++++
T Consensus 78 ~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~ 157 (347)
T 3hfq_A 78 LNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVI 157 (347)
T ss_dssp EEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEE
T ss_pred eeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEE
Confidence 344455778889999999999998888 678999999962 2 33333321 1224889999999997676
Q ss_pred eeCCCcEEEeecc-CCeEEE---Eccc-cCCe-EEEEecCCCEEEE-EeCCCCEEEEecCC--CccceeeecccCCCCCC
Q psy17902 291 GGTDKSVRVWKIQ-EESQLV---FNGH-SRGI-DMTRRVNDQQFIT-CGEDGTLSLWSILK--KVPTHTIPVAHGYDSSS 361 (454)
Q Consensus 291 ~~~dg~i~i~d~~-~~~~~~---~~~~-~~~i-~~~~~~~~~~l~~-~~~dg~i~iwd~~~--~~~~~~~~~~~~~~~~~ 361 (454)
...++.|.+|++. ++.... +... .... ...+.+++.++++ +..++.|.+|++.. +........ .......
T Consensus 158 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~-~~~~~~~ 236 (347)
T 3hfq_A 158 DLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV-KTIPADY 236 (347)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE-ESSCTTC
T ss_pred eCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee-eecCCCC
Confidence 6678899999998 444331 1111 2233 3444556665555 45788999999874 332111111 1111001
Q ss_pred CCCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCC---ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902 362 SEPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPK---RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 362 ~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~ 437 (454)
.....+..++|+|+|++| ++...++.|.+|++... ..+..+.. +...+..++|+|||++|+++...++.|.+|+
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIST--EGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEEC--SSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEec--CCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 112458899999999977 45556899999999733 33333332 3456889999999999999866779999996
Q ss_pred eeC
Q psy17902 438 TIK 440 (454)
Q Consensus 438 ~~~ 440 (454)
...
T Consensus 315 ~d~ 317 (347)
T 3hfq_A 315 RDL 317 (347)
T ss_dssp ECT
T ss_pred EeC
Confidence 643
No 146
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=1.1e-23 Score=211.96 Aligned_cols=282 Identities=7% Similarity=0.005 Sum_probs=195.4
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCce--ecccCCccc----------CCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902 145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSK--VCSSPFVKT----------DRKSYPPILALAVANNNELVASGDNNS 212 (454)
Q Consensus 145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~----------~~~~~~~v~~~~~~~~~~~l~~~~~dg 212 (454)
+..+.|. ++.+++++.+| | +||+.+++. ...+..... ...+...|.+++|+|+ ..++.+. ++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~-~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT-QG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE-TT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE-CC
Confidence 4556777 66777777788 8 999998876 221111000 0011246999999999 5555554 49
Q ss_pred cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-----ceeEEEeeccCCc------------
Q psy17902 213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-----RAYVETLFGHQSA------------ 275 (454)
Q Consensus 213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~------------ 275 (454)
.|++||+.+.....+..+...+.+++|+|+|+.|+++ .++.|++||+.+ ++.......+...
T Consensus 102 ~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~ 180 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREF 180 (706)
T ss_dssp EEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCT
T ss_pred EEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhc
Confidence 9999999666666666777889999999999999985 679999999998 7766544433332
Q ss_pred --eeEEEeecCCCEEEEee---------------------------------CCCcEEEeeccCCeEEEEc---cccCCe
Q psy17902 276 --ITSLDILAKNRVISSGG---------------------------------TDKSVRVWKIQEESQLVFN---GHSRGI 317 (454)
Q Consensus 276 --v~~~~~~~~~~~l~~~~---------------------------------~dg~i~i~d~~~~~~~~~~---~~~~~i 317 (454)
+.++.|+|+|++|++++ .+..|++||+.++...... .+...+
T Consensus 181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 260 (706)
T 2z3z_A 181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL 260 (706)
T ss_dssp TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE
T ss_pred CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE
Confidence 48899999999999887 4467999999988766433 344556
Q ss_pred EEEEe-cCCCEEEEEeCCC-----CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec--CCCEEEEecCCCcEE
Q psy17902 318 DMTRR-VNDQQFITCGEDG-----TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH--NSDLVASGSYDGCVK 389 (454)
Q Consensus 318 ~~~~~-~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--~~~~l~~~~~dg~v~ 389 (454)
..+.| +++..|++++.++ .|.+||+.++.....+....... ....+.++.|+| +|++|++++.||.++
T Consensus 261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~----~~~~~~~~~~sp~~dg~~l~~~~~~g~~~ 336 (706)
T 2z3z_A 261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKH----YVEPLHPLTFLPGSNNQFIWQSRRDGWNH 336 (706)
T ss_dssp EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSS----CCCCCSCCEECTTCSSEEEEEECTTSSCE
T ss_pred eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCC----eECccCCceeecCCCCEEEEEEccCCccE
Confidence 55555 4667788877665 89999999884333332111100 011246789999 999999999999999
Q ss_pred EEEcC-CCceeeEeccCCCceeeeE-EEEcCCCCEEEEEecCCC----ceeeeeee
Q psy17902 390 LWKIT-PKRTLEFLQDIPLSGVINS-LVFTSDHKHLVAGIGTEH----RFGRWKTI 439 (454)
Q Consensus 390 iwd~~-~~~~~~~~~~~~~~~~v~~-l~~s~d~~~l~~~~~~d~----~i~~W~~~ 439 (454)
||.+. ++..+..+.. +...+.+ ++|+|+|+.|+++++.++ .|..|+..
T Consensus 337 l~~~~~~~~~~~~l~~--~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 337 LYLYDTTGRLIRQVTK--GEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EEEEETTSCEEEECCC--SSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EEEEECCCCEEEecCC--CCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 99887 5666666654 5566766 799999999988766665 55555543
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.92 E-value=1.1e-22 Score=186.33 Aligned_cols=262 Identities=9% Similarity=0.021 Sum_probs=185.2
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeC-CCccE
Q psy17902 147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSS-SLEHL 224 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~-~~~~~ 224 (454)
.+++++++.++++++.++.|.+||+.+++....+.. .....+..++|+|++++++ ++..++.|.+||+ +++.+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVM-----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEEC-----SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEec-----CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 457788899999999999999999998877665542 1212477899999998654 5566899999999 45555
Q ss_pred Eeeccc------CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCcee---EEEeeccCCceeEEEeec
Q psy17902 225 HTFTGH------KAPITGLAISFECDTLYSSSND------------RSIKVWNIEDRAY---VETLFGHQSAITSLDILA 283 (454)
Q Consensus 225 ~~~~~~------~~~v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~---~~~~~~~~~~v~~~~~~~ 283 (454)
..+..+ ...+.+++|+|++++|++++.+ +.|.+||+.+++. +..+. +...+.+++|+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~ 157 (349)
T 1jmx_B 79 FHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAAD 157 (349)
T ss_dssp EEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECT
T ss_pred EEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECC
Confidence 555432 2337889999999999998865 8999999988543 33333 344688999999
Q ss_pred CCCEEEEeeCCCcEEEeeccCCeEEE-EccccC------------------------CeEEEEecCC------------C
Q psy17902 284 KNRVISSGGTDKSVRVWKIQEESQLV-FNGHSR------------------------GIDMTRRVND------------Q 326 (454)
Q Consensus 284 ~~~~l~~~~~dg~i~i~d~~~~~~~~-~~~~~~------------------------~i~~~~~~~~------------~ 326 (454)
+++ +++++ +.|++||+.+++... +..... ....+.+.++ .
T Consensus 158 dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 55554 349999999887663 322210 0011111110 0
Q ss_pred EEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcCCCceeeEeccC
Q psy17902 327 QFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDI 405 (454)
Q Consensus 327 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 405 (454)
++......+.+.+|++.. ....+..++|+| ++++|+++ ++.|.+||+.+++.+..+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~- 293 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFAD------------------LTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL- 293 (349)
T ss_dssp EEEEETTTCCEEEEEEEE------------------CSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-
T ss_pred EEEEeccCCcEEeccccc------------------CCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-
Confidence 111222344455554411 122388999999 99999888 88999999999887777653
Q ss_pred CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 406 PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 406 ~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
...+.+++|+|+|++|+++ +.++.|.+|+..++
T Consensus 294 --~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 294 --DHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTL 326 (349)
T ss_dssp --SSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTT
T ss_pred --CCCccceEECCCCCEEEEe-cCCCeEEEEecccc
Confidence 3457899999999999987 77899999998665
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=7.1e-23 Score=201.13 Aligned_cols=267 Identities=10% Similarity=0.057 Sum_probs=191.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---CCcEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---NSNIKL 216 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~v~v 216 (454)
+..+|++++|+|||++||+++. ||++.||++.++....... .+...+..++|+|+ +++++++. +....+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~------~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l 92 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNR------EPINSVLDPHYGVG-RVILVRDVSKGAEQHAL 92 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCS------SCCSEECEECTTCS-EEEEEEECSTTSCCEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeec------ccccccccccCCCC-eEEEEeccCCCCcceEE
Confidence 4557999999999999999887 9999999986655433222 23357999999999 77777765 455556
Q ss_pred Ee--C--CCccEEeecccCCCeEEEEEcCCCCE-EEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902 217 WS--S--SLEHLHTFTGHKAPITGLAISFECDT-LYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 217 w~--~--~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 291 (454)
|. . .+... .+..+. .+...+|+|+++. +++.+.++.+.+||+.+++...... +.. .+++|+|+|++|+++
T Consensus 93 ~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~~--~~~~~spDG~~la~~ 167 (582)
T 3o4h_A 93 FKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LPG--FGFVSDIRGDLIAGL 167 (582)
T ss_dssp EEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ESS--CEEEEEEETTEEEEE
T ss_pred EEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CCC--ceEEECCCCCEEEEE
Confidence 54 4 44444 333222 3446688888853 4444455556699999887655443 333 889999999999988
Q ss_pred eCC----CcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEEeCCC--CEEEEecCCCccceeeecccCCCCCCCCC
Q psy17902 292 GTD----KSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITCGEDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEP 364 (454)
Q Consensus 292 ~~d----g~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 364 (454)
+.+ +.|++||+.++....+..+...+....|+ ++..|+++..++ .|++||+.++... .+.. +.
T Consensus 168 ~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~---------~~ 237 (582)
T 3o4h_A 168 GFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL---------PS 237 (582)
T ss_dssp EEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC---------SC
T ss_pred EEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC---------CC
Confidence 777 78999999988887777777766665555 567788777888 8999999887765 3221 12
Q ss_pred CcEEEEE--------EecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc--ee
Q psy17902 365 NWITSVA--------CLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR--FG 434 (454)
Q Consensus 365 ~~i~~~~--------~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~--i~ 434 (454)
..+..++ |+|+|.++++++.+|++++|++ ++... . ..+.|.+++|+ ++++++++++.... +.
T Consensus 238 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~--~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~ 309 (582)
T 3o4h_A 238 KDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---A--PQGNHGRVVLW-RGKLVTSHTSLSTPPRIV 309 (582)
T ss_dssp SHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---C--CSSEEEEEEEE-TTEEEEEEEETTEEEEEE
T ss_pred cChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---c--CCCceEEEEec-CCEEEEEEcCCCCCCeEE
Confidence 2244444 9999999999999999999999 65443 1 34678999999 99988877444433 44
Q ss_pred eee
Q psy17902 435 RWK 437 (454)
Q Consensus 435 ~W~ 437 (454)
+|+
T Consensus 310 ~~d 312 (582)
T 3o4h_A 310 SLP 312 (582)
T ss_dssp EET
T ss_pred EEc
Confidence 444
No 149
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=3.5e-22 Score=178.33 Aligned_cols=236 Identities=11% Similarity=0.046 Sum_probs=172.8
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC--
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-- 210 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-- 210 (454)
..+.. |...|.+++|+|++++|++++ ++.|.+||+.+ +........ .+...+.+++|+|++++|++++.
T Consensus 35 ~~~~~--~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~-----~~~~~~~~~~~spdg~~l~~~~~~~ 106 (297)
T 2ojh_A 35 RVVWQ--TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG-----FATICNNDHGISPDGALYAISDKVE 106 (297)
T ss_dssp EEEEE--ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT-----TCCCBCSCCEECTTSSEEEEEECTT
T ss_pred eeecc--CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc-----cccccccceEECCCCCEEEEEEeCC
Confidence 34556 889999999999999999987 78999999998 665544321 23467889999999999999983
Q ss_pred CCcEEEE--eCCCccEEeecccCCCeEEEEEcCCCCEEE-EEeCCCcEEEEeC--CCceeEEEeeccCCceeEEEeecCC
Q psy17902 211 NSNIKLW--SSSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRSIKVWNI--EDRAYVETLFGHQSAITSLDILAKN 285 (454)
Q Consensus 211 dg~v~vw--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~iwd~--~~~~~~~~~~~~~~~v~~~~~~~~~ 285 (454)
++.+.|| ++.+.....+..+. .+.+++|+|+++.|+ +++.++.+.+|++ .++. ...+..+...+.+++|+|++
T Consensus 107 ~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~s~dg 184 (297)
T 2ojh_A 107 FGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEGRNDGPDYSPDG 184 (297)
T ss_dssp TSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSSCEEEEEECTTS
T ss_pred CCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCCccccceECCCC
Confidence 3445555 44555555555444 489999999999887 7778999999985 3343 45566788899999999999
Q ss_pred CEEEEee-CCCcEEEeecc--CCeEEEEccccCCeEEEEe-cCCCEEEEEeCC-----------CCEEEEecCCCcccee
Q psy17902 286 RVISSGG-TDKSVRVWKIQ--EESQLVFNGHSRGIDMTRR-VNDQQFITCGED-----------GTLSLWSILKKVPTHT 350 (454)
Q Consensus 286 ~~l~~~~-~dg~i~i~d~~--~~~~~~~~~~~~~i~~~~~-~~~~~l~~~~~d-----------g~i~iwd~~~~~~~~~ 350 (454)
++|++++ .++.+.+|++. ......+..+...+..+.+ +++.+|++++.+ +.|.+||+.++.....
T Consensus 185 ~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred CEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 9877665 58899999886 3334455556656665555 467778777765 5699999988765433
Q ss_pred eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902 351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG 386 (454)
Q Consensus 351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 386 (454)
..... +...+.+++|+|++++|++++.+.
T Consensus 265 ~~~~~-------~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 265 FDLFG-------GQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEE-------STTTSCSCCBCTTSSEEEEEEECC
T ss_pred eccCC-------CCcccccceECCCCCEEEEEEecc
Confidence 32211 233478899999999888887653
No 150
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=4.5e-21 Score=175.98 Aligned_cols=242 Identities=7% Similarity=0.004 Sum_probs=186.4
Q ss_pred CceEEEEEeCCCcEEEEecC-------CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCC
Q psy17902 191 PPILALAVANNNELVASGDN-------NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIE 261 (454)
Q Consensus 191 ~~v~~~~~~~~~~~l~~~~~-------dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~ 261 (454)
..+..++|+|++++|++++. ++.|.+||. +++.+..+.. ...+.+++|+|++++++++ ..++.|.+||+.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 36789999999998888774 468999999 5555555543 4457889999999966555 457999999999
Q ss_pred CceeEEEeeccCCc---------eeEEEeecCCCEEEEee--CCCcEEEeeccCCeEEEEcc-ccCCe-EEEEecCCCEE
Q psy17902 262 DRAYVETLFGHQSA---------ITSLDILAKNRVISSGG--TDKSVRVWKIQEESQLVFNG-HSRGI-DMTRRVNDQQF 328 (454)
Q Consensus 262 ~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~-~~~~i-~~~~~~~~~~l 328 (454)
+++.+..+..+... +.++.|+|+++++++++ .++.|.+||+.+++...... +.... ...+.+++.++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 99988777654322 78899999999877765 47889999999988773333 33333 34455677889
Q ss_pred EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CCcEEEEEcCCCceeeEeccCCC
Q psy17902 329 ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DGCVKLWKITPKRTLEFLQDIPL 407 (454)
Q Consensus 329 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~~~~~~~~~~~~~~~ 407 (454)
++++.++.|.+||+.+++....+..... .+...+..++|+|++++|++++. ++.|.+||+.+++.+..+...
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-- 272 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDD-----GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP-- 272 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCS-----SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS--
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCC-----CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC--
Confidence 9999999999999999988877765221 12334889999999997766654 589999999999888777642
Q ss_pred ceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 408 SGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 408 ~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
. ...++|+|+|++|+++...++.|.+|+..++.
T Consensus 273 -~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 273 -E-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp -S-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred -C-CceEEECCCCCEEEEEECCCCeEEEEECCCCe
Confidence 1 25799999999888886789999999986553
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=2.6e-21 Score=175.97 Aligned_cols=238 Identities=10% Similarity=0.077 Sum_probs=172.4
Q ss_pred EEeCCCc-EEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCcee-EEEeecc
Q psy17902 197 AVANNNE-LVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAY-VETLFGH 272 (454)
Q Consensus 197 ~~~~~~~-~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~-~~~~~~~ 272 (454)
.|.+++. .+++++.++.|.+||+ +++.+..+..+...+ +++|+|+++++++++. ++.|.+||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 3555444 5777788899999999 566666666666667 9999999997777666 88999999999887 6666666
Q ss_pred CCceeEEEeecCCCEEEEeeCCC---cEEEeeccCCeEEEEccccCCeEEEEe-cCCCEEE-EEeCCCC-EEEEecCCCc
Q psy17902 273 QSAITSLDILAKNRVISSGGTDK---SVRVWKIQEESQLVFNGHSRGIDMTRR-VNDQQFI-TCGEDGT-LSLWSILKKV 346 (454)
Q Consensus 273 ~~~v~~~~~~~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~~~l~-~~~~dg~-i~iwd~~~~~ 346 (454)
..+..+++|+|++++|+++..++ .|.+||+.+++.............+.+ +++++++ +...++. |.+|++....
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 66666699999999998665553 899999999887743333333444444 4555455 4456688 9999997644
Q ss_pred cceeeecccCCCCCCCCCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCCce---eeEeccCCCceeeeEEEEcCCCCE
Q psy17902 347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPKRT---LEFLQDIPLSGVINSLVFTSDHKH 422 (454)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~~~---~~~~~~~~~~~~v~~l~~s~d~~~ 422 (454)
.+.... .... .....+..++|+|+|++| +++..++.|.+||+.+++. +..+. ....+..++|+|||++
T Consensus 163 ~~~~~~-~~~~----~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 163 VLFDTG-QEFI----SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG---TNNLPGTIVVSRDGST 234 (331)
T ss_dssp CEEEEE-EEEE----CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE---CSSCCCCEEECTTSSE
T ss_pred cEeecC-Cccc----cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc---CCCCCceEEECCCCCE
Confidence 332221 0000 012237899999999955 4555689999999998887 55555 4467889999999999
Q ss_pred EEEEecCCCceeeeeeeCCCe
Q psy17902 423 LVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 423 l~~~~~~d~~i~~W~~~~~~~ 443 (454)
|+++...++.|.+|+..++..
T Consensus 235 l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 235 VYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp EEEECSSEEEEEEEETTTTEE
T ss_pred EEEEEcCCCEEEEEECCCCce
Confidence 988867788899999876544
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=6.6e-21 Score=175.57 Aligned_cols=271 Identities=9% Similarity=0.068 Sum_probs=178.9
Q ss_pred CCCCEEEEEeC----CCeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC----CcEEEEeCCC
Q psy17902 152 SDSKHVYSACK----DGIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN----SNIKLWSSSL 221 (454)
Q Consensus 152 ~~~~~l~~~~~----dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~v~vw~~~~ 221 (454)
+...++++|+. ++.|.+|.++. +........ +...+..++|+|++++|++++.+ +.|.+|++..
T Consensus 11 ~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~------~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~ 84 (361)
T 3scy_A 11 DSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA------EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDK 84 (361)
T ss_dssp GGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE------ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEET
T ss_pred CCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc------cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeC
Confidence 33456666643 56899997753 433222111 33466779999999999998875 7999999832
Q ss_pred --cc---EEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEe------ec--------cCCceeEEEe
Q psy17902 222 --EH---LHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETL------FG--------HQSAITSLDI 281 (454)
Q Consensus 222 --~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~------~~--------~~~~v~~~~~ 281 (454)
.. +.....+......+++ ++++|++++ .++.|.+|++.....+..+ .+ +...+.+++|
T Consensus 85 ~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 162 (361)
T 3scy_A 85 EKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI 162 (361)
T ss_dssp TTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE
T ss_pred CCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE
Confidence 22 2333445567777888 788777776 5789999999754322111 11 1234578999
Q ss_pred ecCCCEEEEee-CCCcEEEeeccCCeE--------------EEEccccCCeEEEE-ecCCCEEEEEe-CCCCEEEEecCC
Q psy17902 282 LAKNRVISSGG-TDKSVRVWKIQEESQ--------------LVFNGHSRGIDMTR-RVNDQQFITCG-EDGTLSLWSILK 344 (454)
Q Consensus 282 ~~~~~~l~~~~-~dg~i~i~d~~~~~~--------------~~~~~~~~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~~ 344 (454)
+|++++|++++ .++.|.+|++..... ............+. .+++.++++++ .++.|.+|++.+
T Consensus 163 spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 242 (361)
T 3scy_A 163 TPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD 242 (361)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET
T ss_pred CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC
Confidence 99999665554 578999998875431 11222233344444 45666777666 689999999986
Q ss_pred Cccc--eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC--CCcEEEEEcC--CCc--eeeEeccCCCceeeeEEEE
Q psy17902 345 KVPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY--DGCVKLWKIT--PKR--TLEFLQDIPLSGVINSLVF 416 (454)
Q Consensus 345 ~~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--dg~v~iwd~~--~~~--~~~~~~~~~~~~~v~~l~~ 416 (454)
+... ..+.... .+......++|+|+|++|+++.. ++.|.+|++. ++. .+..+. ....+.+++|
T Consensus 243 g~~~~~~~~~~~~------~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~---~g~~~~~~~~ 313 (361)
T 3scy_A 243 GMLDEIQTVAADT------VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL---TGIHPRNFII 313 (361)
T ss_dssp TEEEEEEEEESCS------SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE---CSSCCCEEEE
T ss_pred CceEEeEEEecCC------CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec---CCCCCceEEE
Confidence 6432 2222111 12233689999999998876665 4899999996 343 233332 2456889999
Q ss_pred cCCCCEEEEEecCCCceeeeeee
Q psy17902 417 TSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 417 s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
+|||++|+++...++.|.+|...
T Consensus 314 spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 314 TPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CTTSCEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEECCCCCEEEEEEE
Confidence 99999999996688999997665
No 153
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.90 E-value=1.8e-21 Score=181.23 Aligned_cols=291 Identities=7% Similarity=-0.015 Sum_probs=194.2
Q ss_pred eEeEeccCCCCCCeEE-----EEEcCCCCEEEEEeC-CC--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc
Q psy17902 132 VCTKFNGKPHRASITC-----IAVTSDSKHVYSACK-DG--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE 203 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~-----~~~s~~~~~l~~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 203 (454)
....+.. |...... .+|+|||++|+.++. +| .|.+||+.++....... .+...+..++|+|+|+
T Consensus 22 ~~~~lt~--~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~------~~~~~~~~~~~spdg~ 93 (388)
T 3pe7_A 22 QVTRLTP--PDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE------GRGDNTFGGFLSPDDD 93 (388)
T ss_dssp EEEECSC--TTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC------SSCBCSSSCEECTTSS
T ss_pred ceEEecC--CcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee------CCCCCccceEEcCCCC
Confidence 3445555 6665665 889999999999887 66 48888998877655433 3433444678999999
Q ss_pred EEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEE--EcCCCCEEEEE----------------------eCCCcEEEE
Q psy17902 204 LVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLA--ISFECDTLYSS----------------------SNDRSIKVW 258 (454)
Q Consensus 204 ~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~----------------------~~dg~i~iw 258 (454)
.|++++.++.|++||+ .+.....+..+...+.... +++++.+++.. ..++.|.+|
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 173 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRV 173 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEE
Confidence 9999999999999999 4444444455555454444 48899888743 245789999
Q ss_pred eCCCceeEEEeeccCCceeEEEeec-CCCEEEEeeCC------CcEEEeeccCCeEEEEccccC--CeEE-EEecCCCEE
Q psy17902 259 NIEDRAYVETLFGHQSAITSLDILA-KNRVISSGGTD------KSVRVWKIQEESQLVFNGHSR--GIDM-TRRVNDQQF 328 (454)
Q Consensus 259 d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~i~~-~~~~~~~~l 328 (454)
|+.+++.. .+..+...+..+.|+| +++.|+.+..+ ..|.++|+.......+..+.. .+.. .+.+++..|
T Consensus 174 d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 174 DLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp ETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCE
T ss_pred ECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEE
Confidence 99988654 4445677789999999 99888776653 378888887765554444432 2433 444566666
Q ss_pred EEEeC-CC----CEEEEecCCCccceeeecccCCCCCCCCC-CcEEEEEEecCCCEEEEe---------cCCCcEEEEEc
Q psy17902 329 ITCGE-DG----TLSLWSILKKVPTHTIPVAHGYDSSSSEP-NWITSVACLHNSDLVASG---------SYDGCVKLWKI 393 (454)
Q Consensus 329 ~~~~~-dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~---------~~dg~v~iwd~ 393 (454)
+..+. ++ .|++||+.+++......... .. +. .....+.|+|+|+.|+.. ..+..|++||+
T Consensus 253 ~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-~~----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 253 VYVSYLKGSPDRFIYSADPETLENRQLTSMPA-CS----HLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EEEEEETTCCCEEEEEECTTTCCEEEEEEECC-EE----EEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred EEEecCCCCCcceEEEEecCCCceEEEEcCCC-ce----eeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 55442 22 39999998886433222111 00 00 001113699999977754 45668999999
Q ss_pred CCCceeeEeccCCCce-----------eeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 394 TPKRTLEFLQDIPLSG-----------VINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 394 ~~~~~~~~~~~~~~~~-----------~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
.++... .+.. +.. .+.+++|+|||+.|+.++..++...+|...
T Consensus 328 ~~~~~~-~l~~--~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 328 KNGTQH-RVAR--HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp TTTEEE-EEEE--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cCCceE-Eecc--ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 887543 3333 223 478899999999999886777777777654
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=2.2e-21 Score=182.35 Aligned_cols=245 Identities=16% Similarity=0.160 Sum_probs=177.2
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeCCC-----------ccEEe-----ecccCCCeEEEEEcCCCCEEE----EEeC
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSSSL-----------EHLHT-----FTGHKAPITGLAISFECDTLY----SSSN 251 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~-----------~~~~~-----~~~~~~~v~~~~~~~~~~~l~----~~~~ 251 (454)
.++.+++++++.++++++.++ +++|+... ..+.. ...+...|++++|+|++++|+ +|+.
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 578899999999999999888 88887410 11111 123567899999999999999 7888
Q ss_pred CCcEEEEeCCCc--------e---eEEEeeccCCceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeE
Q psy17902 252 DRSIKVWNIEDR--------A---YVETLFGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGID 318 (454)
Q Consensus 252 dg~i~iwd~~~~--------~---~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~ 318 (454)
|+.|++||+.++ + .+..+.+|...|++++|+|+ +++|++++.||+|++||++++... ...+|...+.
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 999999998764 1 24556679999999999998 789999999999999999988665 4556777888
Q ss_pred EEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCC------cEEE
Q psy17902 319 MTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDG------CVKL 390 (454)
Q Consensus 319 ~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg------~v~i 390 (454)
++.|. ++.+|++|+.||.|++||++ +.....+...... ...|...+.++.|++++.++++. +.+| .+++
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~--~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY--ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTC--CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCccc--CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 77776 57799999999999999998 5444444332211 11234469999999988877543 3443 3899
Q ss_pred EEcCCCc-----eeeEeccC-----CCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 391 WKITPKR-----TLEFLQDI-----PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 391 wd~~~~~-----~~~~~~~~-----~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
|++.... ....+... ....+-..+.+.++.++++++.+..+.|.++....
T Consensus 274 ~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 274 ALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp EECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred EEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 9997642 11222111 11222333445588889988878788787777543
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=2.3e-21 Score=176.58 Aligned_cols=244 Identities=13% Similarity=0.092 Sum_probs=179.4
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec------------C
Q psy17902 144 SITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD------------N 210 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------~ 210 (454)
.+.+++|+|++++++ ++..++.|.+||+.+++....+..... ..+...+.+++|+|++++|++++ .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP-EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT-TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc-ccccccccceEECCCCCEEEEEeccccccccccccc
Confidence 478999999998765 455678999999998887655442110 00112567899999999988886 5
Q ss_pred CCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902 211 NSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289 (454)
Q Consensus 211 dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 289 (454)
++.|.+||+ ++..+..+.. ...+.+++|+|++++|+++ ++.|.+||+.+++.+..+..+.. ...+.|+|++..++
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQPDVLAVW 189 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCCBCCCCC
T ss_pred CceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCCCccEEe
Confidence 799999999 4445555543 4567889999999988888 68999999999988777654431 11337889987665
Q ss_pred EeeCCC------------------------cEEEeeccCCeEE--EEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEec
Q psy17902 290 SGGTDK------------------------SVRVWKIQEESQL--VFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSI 342 (454)
Q Consensus 290 ~~~~dg------------------------~i~i~d~~~~~~~--~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~ 342 (454)
.++..+ .|.+||+.+++.. .+..+...+..+.+ +++.+++++ ++.|.+||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDL 267 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence 544332 4689999988765 23334334444444 456677766 799999999
Q ss_pred CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD 404 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 404 (454)
.+++.+..+.... .+.+++|+|+|++|++++.++.|.+||+.+++.+..+..
T Consensus 268 ~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 268 EKNASIKRVPLPH----------SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp TTTEEEEEEECSS----------CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCCcCcceecCCC----------ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 9988877765432 267899999999999999999999999999988877764
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=2.1e-20 Score=171.18 Aligned_cols=245 Identities=13% Similarity=0.118 Sum_probs=163.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC---CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACK---DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKL 216 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~v 216 (454)
+...+..++|+|+|+ |++++. ++.|.+|++.++........ ..+...+..++|+|+|++|++++ .++.|.+
T Consensus 38 ~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~----~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTV----VAPGTPPAYVAVDEARQLVYSANYHKGTAEV 112 (347)
T ss_dssp ECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEE----EEESCCCSEEEEETTTTEEEEEETTTTEEEE
T ss_pred ccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeee----ecCCCCCEEEEECCCCCEEEEEeCCCCEEEE
Confidence 556788899999999 555554 68999999976553211110 12455788999999999888887 6789999
Q ss_pred EeCC-Ccc---EEeecc---------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC-CceeE--EEeec-cCCceeEE
Q psy17902 217 WSSS-LEH---LHTFTG---------HKAPITGLAISFECDTLYSSSNDRSIKVWNIE-DRAYV--ETLFG-HQSAITSL 279 (454)
Q Consensus 217 w~~~-~~~---~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~-~~~~~--~~~~~-~~~~v~~~ 279 (454)
|++. ... +..+.. +...+.+++|+|+++++++...++.|.+|++. ++... ..+.. ....+..+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 9983 222 222221 12348899999999966666668899999998 45432 22222 23367889
Q ss_pred EeecCCCEEEE-eeCCCcEEEeeccC--CeEE---EEcccc------CCeEEEE-ecCCCEE-EEEeCCCCEEEEecCCC
Q psy17902 280 DILAKNRVISS-GGTDKSVRVWKIQE--ESQL---VFNGHS------RGIDMTR-RVNDQQF-ITCGEDGTLSLWSILKK 345 (454)
Q Consensus 280 ~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~~---~~~~~~------~~i~~~~-~~~~~~l-~~~~~dg~i~iwd~~~~ 345 (454)
+|+|+|++|++ +..++.|.+|++.. +... ...... .....+. .+++.+| ++...++.|.+|++...
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 99999996655 56788999999884 4432 122111 1244444 4566666 45557899999999733
Q ss_pred ---ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CCcEEEEEc--CCCcee
Q psy17902 346 ---VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DGCVKLWKI--TPKRTL 399 (454)
Q Consensus 346 ---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg~v~iwd~--~~~~~~ 399 (454)
..+..+.. +...+..++|+|+|++|++++. ++.|.+|++ .+++..
T Consensus 273 g~~~~~~~~~~---------~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 273 GHLTLIQQIST---------EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp GCEEEEEEEEC---------SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CcEEEeEEEec---------CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 23333322 1223778999999998887765 489999955 455443
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.88 E-value=4e-20 Score=170.45 Aligned_cols=278 Identities=7% Similarity=0.015 Sum_probs=178.4
Q ss_pred EEEEEeCC--CeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC--CccEEeecc
Q psy17902 156 HVYSACKD--GIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS--LEHLHTFTG 229 (454)
Q Consensus 156 ~l~~~~~d--g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~--~~~~~~~~~ 229 (454)
+|++|+.. +.|.+|+++ ++........ . ......+..++|+|++++|++++.+ .|.+|++. +........
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~-~--~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~ 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRT-E--IPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASH 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEE-E--CCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEE-c--cCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEe
Confidence 45566553 467777653 3332211000 0 0123367789999999999988877 99999983 433322221
Q ss_pred -cCCCeEEEEEcCCCCE--EEEEe-------------CCCcEEEEeCC-CceeEEEee----ccCCceeEEEeecCCCEE
Q psy17902 230 -HKAPITGLAISFECDT--LYSSS-------------NDRSIKVWNIE-DRAYVETLF----GHQSAITSLDILAKNRVI 288 (454)
Q Consensus 230 -~~~~v~~~~~~~~~~~--l~~~~-------------~dg~i~iwd~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l 288 (454)
..+.+.+++|+|++++ +++++ .+|.+.+|++. .++....+. .+...+.+++|+|+|++|
T Consensus 80 ~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l 159 (365)
T 1jof_A 80 PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL 159 (365)
T ss_dssp ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred ecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE
Confidence 1133566899999984 44553 68999999997 455443332 245678999999999988
Q ss_pred EEeeC-CCcEEEeecc-CCeEE---EEc--cccCCeEEEE-ecCCCEEEEEe-CCCCEEEEecC--CCccce---eeecc
Q psy17902 289 SSGGT-DKSVRVWKIQ-EESQL---VFN--GHSRGIDMTR-RVNDQQFITCG-EDGTLSLWSIL--KKVPTH---TIPVA 354 (454)
Q Consensus 289 ~~~~~-dg~i~i~d~~-~~~~~---~~~--~~~~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~--~~~~~~---~~~~~ 354 (454)
+++.. ++.|++|++. +++.. .+. .+......+. .+++.++++++ .++.|.+|++. ++.... .+...
T Consensus 160 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 160 YSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 77654 6799999998 66543 122 1233444444 45666777766 47899999875 344321 22211
Q ss_pred cCCCCCCCCCC------cEEEEE-EecCCCEEEEecCCC------cEEEEEcC-CCceeeE---eccCCCceeeeEEEEc
Q psy17902 355 HGYDSSSSEPN------WITSVA-CLHNSDLVASGSYDG------CVKLWKIT-PKRTLEF---LQDIPLSGVINSLVFT 417 (454)
Q Consensus 355 ~~~~~~~~~~~------~i~~~~-~s~~~~~l~~~~~dg------~v~iwd~~-~~~~~~~---~~~~~~~~~v~~l~~s 417 (454)
.. ....+.. .+..++ |+|+|++|++++.+. +|.+|++. +++.... +.. +...+..++|+
T Consensus 240 ~~--~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~--~~~~~~~~a~s 315 (365)
T 1jof_A 240 PP--GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT--PTSGGHSNAVS 315 (365)
T ss_dssp CT--TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC--SSCCTTCCCEE
T ss_pred CC--CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec--CCCCcccceec
Confidence 10 0001121 488999 999999887765432 89999996 5554331 221 33456789999
Q ss_pred C---CCCEEEEEecCCCceeeeeeeCC
Q psy17902 418 S---DHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 418 ~---d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
| ||++|+++...++.|.+|+....
T Consensus 316 p~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 316 PCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp ECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 9 89999999556799999998765
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.88 E-value=1.7e-21 Score=196.34 Aligned_cols=274 Identities=10% Similarity=0.011 Sum_probs=187.6
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC---------CCcEEEE
Q psy17902 147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN---------NSNIKLW 217 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------dg~v~vw 217 (454)
+++|+|++.++++ +.||.|++||+.++........... ....+.+++|||||++|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTM---KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHH---HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccc---cccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 6799999965554 5699999999999876554431100 0013889999999999998876 6899999
Q ss_pred eCCCccE---EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-eccCCce-----------------
Q psy17902 218 SSSLEHL---HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAI----------------- 276 (454)
Q Consensus 218 ~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v----------------- 276 (454)
|+.+... ..+ ...+.+++|+|||+.|+.+. ++.|++|++.++...... .++...|
T Consensus 96 d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~ 171 (719)
T 1z68_A 96 DLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATK 171 (719)
T ss_dssp ETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSS
T ss_pred ECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCc
Confidence 9955544 333 35688999999999999986 789999999888765432 2222222
Q ss_pred eEEEeecCCCEEEEeeCCC----------------------------------cEEEeeccCCeEE---E------Eccc
Q psy17902 277 TSLDILAKNRVISSGGTDK----------------------------------SVRVWKIQEESQL---V------FNGH 313 (454)
Q Consensus 277 ~~~~~~~~~~~l~~~~~dg----------------------------------~i~i~d~~~~~~~---~------~~~~ 313 (454)
.+++|+|||++|++++.|. .|++||+.++... . +.++
T Consensus 172 ~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (719)
T 1z68_A 172 YALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS 251 (719)
T ss_dssp CCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS
T ss_pred ccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC
Confidence 4899999999999887652 7889999877641 1 1245
Q ss_pred cCCeEEEEecCCCEEEEE-eCC----CCEEEEe----cCCCccceeee---cccCCCCCCCCCCcEE-----EEEEecCC
Q psy17902 314 SRGIDMTRRVNDQQFITC-GED----GTLSLWS----ILKKVPTHTIP---VAHGYDSSSSEPNWIT-----SVACLHNS 376 (454)
Q Consensus 314 ~~~i~~~~~~~~~~l~~~-~~d----g~i~iwd----~~~~~~~~~~~---~~~~~~~~~~~~~~i~-----~~~~s~~~ 376 (454)
...+..+.|+++..++.. ... ..|.+|| +.+++....+. .. +..++. .+.|+|+|
T Consensus 252 ~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 252 DYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES--------RTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp CEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC--------SSSCSSSSSCCCCEECTTS
T ss_pred cceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc--------CCceEccccCCccEECCCC
Confidence 556666666655655443 322 2488899 77766554432 11 223344 68899999
Q ss_pred CEEE--EecCCC--cEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC----CCceeeeeeeC
Q psy17902 377 DLVA--SGSYDG--CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT----EHRFGRWKTIK 440 (454)
Q Consensus 377 ~~l~--~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~----d~~i~~W~~~~ 440 (454)
+.|+ ++..+| .|.+|++.++. ...+.. +...+..+.++ +++.|+.++.. ++.+.+|....
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~--~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS--GKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTT-CEECSC--SSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CeEEEEEEccCCceEEEEEECCCCc-eEeccc--CceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 9544 344555 46667776655 344443 44457777777 88888887544 57888998754
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=1.3e-19 Score=166.79 Aligned_cols=261 Identities=10% Similarity=0.071 Sum_probs=170.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC----CeEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKD----GIIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNI 214 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~d----g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v 214 (454)
|...+..++|+|++++|++++.+ |.|.+|++... .....+... ..+...+..+++ ++++|++++ .++.|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~---~~~~~~p~~~~~--dg~~l~~~~~~~~~v 122 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQ---KTMGADPCYLTT--NGKNIVTANYSGGSI 122 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEE---ECSSSCEEEEEE--CSSEEEEEETTTTEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEe---ccCCCCcEEEEE--CCCEEEEEECCCCEE
Confidence 45567889999999999999886 79999988763 111111100 023345677777 777776665 57899
Q ss_pred EEEeCC-CccEEee------c--------ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCce-------e------
Q psy17902 215 KLWSSS-LEHLHTF------T--------GHKAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRA-------Y------ 265 (454)
Q Consensus 215 ~vw~~~-~~~~~~~------~--------~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~-------~------ 265 (454)
.+|++. ...+..+ . .+...+.+++|+|++++|++++. ++.|.+|++.... .
T Consensus 123 ~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 123 TVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred EEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 999983 2222111 1 12334688999999997766654 7899999887543 1
Q ss_pred EEEeeccCCceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEEE---Ecc---ccCCeEEE-EecCCCEEEEEeC--CC
Q psy17902 266 VETLFGHQSAITSLDILAKNRVISSGG-TDKSVRVWKIQEESQLV---FNG---HSRGIDMT-RRVNDQQFITCGE--DG 335 (454)
Q Consensus 266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~---~~~---~~~~i~~~-~~~~~~~l~~~~~--dg 335 (454)
......+...+.+++|+|++++|++++ .++.|.+|++.++.... ... +......+ +.+++.+|+++.. ++
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 111223455678999999999887776 68999999998775431 111 11223344 4456777766664 48
Q ss_pred CEEEEecC--CCc--cceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcC--CCceeeEeccCCCc
Q psy17902 336 TLSLWSIL--KKV--PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS-YDGCVKLWKIT--PKRTLEFLQDIPLS 408 (454)
Q Consensus 336 ~i~iwd~~--~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~--~~~~~~~~~~~~~~ 408 (454)
.|.+|++. ++. .+..+.. + ..+..++|+|+|++|++++ .++.|.+|.+. +++....... .+.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~~~~--g--------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~-~~~ 351 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGYQLT--G--------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKD-IKV 351 (361)
T ss_dssp EEEEEEECTTTCCEEEEEEEEC--S--------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCC-EEC
T ss_pred EEEEEEEcCCCCcEEEeeEecC--C--------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeeccee-eeC
Confidence 99999996 333 2333322 1 1267899999999888877 67899997654 5554433222 133
Q ss_pred eeeeEEEEc
Q psy17902 409 GVINSLVFT 417 (454)
Q Consensus 409 ~~v~~l~~s 417 (454)
..+.|++|.
T Consensus 352 ~~p~~v~~~ 360 (361)
T 3scy_A 352 DKPVCLKFV 360 (361)
T ss_dssp SSEEEEEEE
T ss_pred CCCeEEEEc
Confidence 467888886
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.7e-20 Score=188.99 Aligned_cols=279 Identities=13% Similarity=0.023 Sum_probs=186.0
Q ss_pred CeEEEEEcCCCCEEEEEeC---------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcE
Q psy17902 144 SITCIAVTSDSKHVYSACK---------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNI 214 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v 214 (454)
.|.+++|||||++|++++. ++.|++||+.+++......+ ...+..++|||||+.||++. ++.|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l-------~~~~~~~~~SPDG~~la~~~-~~~i 132 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL-------PRPIQYLCWSPVGSKLAYVY-QNNI 132 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC-------CSSBCCEEECSSTTCEEEEE-TTEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec-------CcccccceECCCCCEEEEEE-CCeE
Confidence 4899999999999999876 78999999998876321221 13588899999999999986 7899
Q ss_pred EEEeC-CCccEEee-cccCCCe-----------------EEEEEcCCCCEEEEEeCCC----------------------
Q psy17902 215 KLWSS-SLEHLHTF-TGHKAPI-----------------TGLAISFECDTLYSSSNDR---------------------- 253 (454)
Q Consensus 215 ~vw~~-~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg---------------------- 253 (454)
++|++ .+...... .++...| .+++|+|||++|++++.|.
T Consensus 133 ~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (719)
T 1z68_A 133 YLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINI 212 (719)
T ss_dssp EEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEE
T ss_pred EEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceee
Confidence 99999 44333222 2333322 4899999999999987652
Q ss_pred ------------cEEEEeCCCceeE---E-----EeeccCCceeEEEeecCCCEEEEeeCC----CcEEEee----ccCC
Q psy17902 254 ------------SIKVWNIEDRAYV---E-----TLFGHQSAITSLDILAKNRVISSGGTD----KSVRVWK----IQEE 305 (454)
Q Consensus 254 ------------~i~iwd~~~~~~~---~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d----~~~~ 305 (454)
.|++||+.+++.. . .+.+|...+.+++|+|+++++++.... ..|.+|| +.++
T Consensus 213 ~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 213 PYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp ECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred cCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 7889999988642 1 233578889999999998777764432 2488899 7666
Q ss_pred eEEEE-----ccccCCeE------EEEecCCCEEEE--EeCCC--CEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902 306 SQLVF-----NGHSRGID------MTRRVNDQQFIT--CGEDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV 370 (454)
Q Consensus 306 ~~~~~-----~~~~~~i~------~~~~~~~~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 370 (454)
+...+ ..+...+. ..+.+++..++. ...+| .|.+||+.++. ...+.. +...+..+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~---------~~~~v~~~ 362 (719)
T 1z68_A 293 DCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITS---------GKWEAINI 362 (719)
T ss_dssp ECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSC---------SSSCEEEE
T ss_pred ceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEeccc---------CceEEEEE
Confidence 55422 24444443 344456665443 44555 46667776654 222221 12237777
Q ss_pred EEecCCCEEEEecCC-----CcEEEEEcCC--Cc-eeeEecc-C-CCceeeeEEEEcCCCCEEEEEecCC--Cceeeeee
Q psy17902 371 ACLHNSDLVASGSYD-----GCVKLWKITP--KR-TLEFLQD-I-PLSGVINSLVFTSDHKHLVAGIGTE--HRFGRWKT 438 (454)
Q Consensus 371 ~~s~~~~~l~~~~~d-----g~v~iwd~~~--~~-~~~~~~~-~-~~~~~v~~l~~s~d~~~l~~~~~~d--~~i~~W~~ 438 (454)
.++ +++.|+..+.+ +.+++|.+.. +. ....+.. . .+...+..+.|+||+++|+..++.. ..+.+|+.
T Consensus 363 ~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 363 FRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp EEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred EEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence 777 77766655554 8899998864 32 1233331 1 1445678899999999888654443 45677876
Q ss_pred eCC
Q psy17902 439 IKG 441 (454)
Q Consensus 439 ~~~ 441 (454)
.++
T Consensus 442 ~~g 444 (719)
T 1z68_A 442 RTD 444 (719)
T ss_dssp SSC
T ss_pred CCC
Confidence 544
No 161
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.86 E-value=1.2e-20 Score=185.22 Aligned_cols=231 Identities=8% Similarity=-0.010 Sum_probs=169.4
Q ss_pred CCceEEEEEeCCCcEEEEecC-CCcEEEEeCCCccEEeecccC-CCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCC--
Q psy17902 190 YPPILALAVANNNELVASGDN-NSNIKLWSSSLEHLHTFTGHK-APITGLAISFECDTLYSSSN---DRSIKVWNIED-- 262 (454)
Q Consensus 190 ~~~v~~~~~~~~~~~l~~~~~-dg~v~vw~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~-- 262 (454)
..+|.+++|+|||++||+++. +|++.||++.+.....+..|. ..+.+++|+|+ +.+++++. +....+|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 347999999999999999887 999999999666666666666 68999999999 77777765 44455654432
Q ss_pred -ceeEEEeeccCCceeEEEeecCCC-EEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC----CC
Q psy17902 263 -RAYVETLFGHQSAITSLDILAKNR-VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED----GT 336 (454)
Q Consensus 263 -~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d----g~ 336 (454)
+... .+..+ ..+...+|+|+++ .+++.+.++.+.+||+.++....+..+.. ....+.+++.++++++.+ +.
T Consensus 100 ~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 100 PGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp TTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-CEEEEEEETTEEEEEEEEETTEEE
T ss_pred CCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-ceEEECCCCCEEEEEEEcCCCCeE
Confidence 2222 33222 2344678888885 33444445556699999988775554444 555667788999987766 78
Q ss_pred EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC--cEEEEEcCCCceeeEeccCCCceeeeEE
Q psy17902 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG--CVKLWKITPKRTLEFLQDIPLSGVINSL 414 (454)
Q Consensus 337 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg--~v~iwd~~~~~~~~~~~~~~~~~~v~~l 414 (454)
|++||+.++... .+.. +...+..++|||||++|+++..+| .|++||+.++... .+.. +...+..+
T Consensus 177 i~~~d~~~g~~~-~l~~---------~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~--~~~~~~~~ 243 (582)
T 3o4h_A 177 LFTSNLSSGGLR-VFDS---------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL--PSKDFSSY 243 (582)
T ss_dssp EEEEETTTCCCE-EECC---------SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC--SCSHHHHH
T ss_pred EEEEcCCCCCce-Eeec---------CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC--CCcChhhh
Confidence 999999887654 3321 344589999999999999888888 8999999988766 5443 55566666
Q ss_pred E--------EcCCCCEEEEEecCCCceeeeee
Q psy17902 415 V--------FTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 415 ~--------~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
+ |+|||..++++ +.++.+.+|..
T Consensus 244 ~~~~~~~~~~spdg~~~~~~-~~~g~~~l~~~ 274 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVA-RREGRSAVFID 274 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEE-EETTEEEEEET
T ss_pred hhccccceeEcCCCcEEEEE-EcCCcEEEEEE
Confidence 6 99999655555 88999999987
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.86 E-value=3.1e-20 Score=187.19 Aligned_cols=288 Identities=9% Similarity=-0.009 Sum_probs=184.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---------C
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---------S 212 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------g 212 (454)
.....+++|+|++.+|+++ ||.|++||+.++.....+..... .........++|||||++|++++.+ +
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF-DEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTT-TTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhh-hhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 3346689999999999886 89999999999876544332110 1111233458999999999998875 5
Q ss_pred cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-eccCCce---------------
Q psy17902 213 NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAI--------------- 276 (454)
Q Consensus 213 ~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v--------------- 276 (454)
.+.+||+.+..+..+..|...+...+|||||+.|+.+. ++.|++|++.++...+.. .++...+
T Consensus 93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 67799997776777888888999999999999999885 689999999887754321 2232222
Q ss_pred --eEEEeecCCCEEEEeeCCCc-EEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC---Ccccee
Q psy17902 277 --TSLDILAKNRVISSGGTDKS-VRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK---KVPTHT 350 (454)
Q Consensus 277 --~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~---~~~~~~ 350 (454)
.++.|+|||+.|+.++.|.. +.+|++....... .+......+.++.... ......|++||+.+ +..+..
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~--~~~~~~~~~~yp~~G~---~~~~~~l~v~d~~~~~~~~~~~~ 246 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES--LQYPKTVRVPYPKAGA---VNPTVKFFVVNTDSLSSVTNATS 246 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT--CSSCEEEEEECCBTTS---CCCEEEEEEEETTSCCSSSCCCE
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC--CCCCcceeecCCCCcC---cCCeeEEEEEECCCCCCCCcceE
Confidence 35899999999988876554 8888764211100 1222223333332110 01123689999988 642222
Q ss_pred eecccCCCCCCCCCCcEEEEEEecCCCEEEEec----CCCcEEEEEcCCCc----e--eeEeccCCCceeee-----EEE
Q psy17902 351 IPVAHGYDSSSSEPNWITSVACLHNSDLVASGS----YDGCVKLWKITPKR----T--LEFLQDIPLSGVIN-----SLV 415 (454)
Q Consensus 351 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~v~iwd~~~~~----~--~~~~~~~~~~~~v~-----~l~ 415 (454)
....... ....+...+..++|+|+|++++... .+..|.+||+.+++ + +..+....+.+.|. ..+
T Consensus 247 ~~l~~~~-~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 247 IQITAPA-SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp EEECCCH-HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred EEecCCc-cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce
Confidence 2111100 0001355699999999999666543 23479999999886 2 22221112444444 789
Q ss_pred EcCCCCEEE-EEecCCCc--eeeeeee
Q psy17902 416 FTSDHKHLV-AGIGTEHR--FGRWKTI 439 (454)
Q Consensus 416 ~s~d~~~l~-~~~~~d~~--i~~W~~~ 439 (454)
|+|||+.|+ ..+..+|. |.+|+..
T Consensus 326 fspDG~~l~~~~s~~~G~~~l~~~~~~ 352 (740)
T 4a5s_A 326 FTLDGNSFYKIISNEEGYRHICYFQID 352 (740)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEETT
T ss_pred EcCCCCEEEEEEEcCCCceEEEEEECC
Confidence 999999887 55344543 5555543
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.86 E-value=4.9e-20 Score=171.87 Aligned_cols=274 Identities=8% Similarity=-0.097 Sum_probs=182.2
Q ss_pred CeEEEEEcCCCCEEEEEeCC---CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 144 SITCIAVTSDSKHVYSACKD---GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
.+.+++|+|+|++|+.+... ..|.+|++.++....... ........+.|+|+|++|+.++.++.|++|++.
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~------~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~ 110 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE------GKGDNTFGGFISTDERAFFYVKNELNLMKVDLE 110 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC------SSCBCTTTCEECTTSSEEEEEETTTEEEEEETT
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec------CCCCccccceECCCCCEEEEEEcCCcEEEEECC
Confidence 37788999999998877543 478888998876543322 122222337899999999999988899999994
Q ss_pred Ccc-EEeecccCCCeEE-------------------EEEcCCCCEEEEE-----eCCCcEEEEeCCCceeEEEeeccCCc
Q psy17902 221 LEH-LHTFTGHKAPITG-------------------LAISFECDTLYSS-----SNDRSIKVWNIEDRAYVETLFGHQSA 275 (454)
Q Consensus 221 ~~~-~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~ 275 (454)
+.. ......+...... +.|+|+++.++.+ ..+..|++||+.+++..... .+...
T Consensus 111 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~ 189 (396)
T 3c5m_A 111 TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAW 189 (396)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSC
T ss_pred CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcc
Confidence 433 3333333332222 3456777766554 35678999999988765444 56778
Q ss_pred eeEEEeec-CCCEEEEeeCC------CcEEEeeccCCeEEEEcccc--CCeEEEEe-cCCCEEEEEeCC-----CCEEEE
Q psy17902 276 ITSLDILA-KNRVISSGGTD------KSVRVWKIQEESQLVFNGHS--RGIDMTRR-VNDQQFITCGED-----GTLSLW 340 (454)
Q Consensus 276 v~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~--~~i~~~~~-~~~~~l~~~~~d-----g~i~iw 340 (454)
+..+.|+| ++..|+..+.+ ..|.+||+..+....+..+. ..+..+.+ +++..|+.++.+ +.|++|
T Consensus 190 ~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 269 (396)
T 3c5m_A 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKA 269 (396)
T ss_dssp EEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEE
T ss_pred cccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEE
Confidence 89999999 78766665543 46888998776544433332 13444444 466667666543 349999
Q ss_pred ecCCCccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEec----------------CCCcEEEEEcCCCceeeEec
Q psy17902 341 SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGS----------------YDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 341 d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~----------------~dg~v~iwd~~~~~~~~~~~ 403 (454)
|+.++......... . .. +.|+| +|++|++++ .++.|++||+.++... .+.
T Consensus 270 d~~~g~~~~l~~~~----------~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~ 336 (396)
T 3c5m_A 270 NPETLENEEVMVMP----------P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLC 336 (396)
T ss_dssp CTTTCCEEEEEECC----------S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEE
T ss_pred ECCCCCeEEeeeCC----------C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-Ecc
Confidence 99887654332211 1 33 88999 999888754 3478999999877543 333
Q ss_pred cCCCce-----------eeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 404 DIPLSG-----------VINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 404 ~~~~~~-----------~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
. +.. .+..++|+|||+.|+.++..++...+|...
T Consensus 337 ~--~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 337 K--HSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp E--CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred C--CCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 2 222 256789999999998886667777777654
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.85 E-value=1.5e-19 Score=166.58 Aligned_cols=244 Identities=8% Similarity=0.034 Sum_probs=163.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcC-CCceecccCCcccCCCCCCceEEEEEeCCCcE--EEEec--------
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLE-TRSKVCSSPFVKTDRKSYPPILALAVANNNEL--VASGD-------- 209 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--l~~~~-------- 209 (454)
+...+..++|+|++++|++++.+ .|.+|++. ++......... .+ +.+.+++|+|+|++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~----~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~ 111 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHP----IG-GHPRANDADTNTRAIFLLAAKQPPYAVYA 111 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEE----CC-SSGGGGCTTSCCEEEEEEECSSTTCCEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEee----cC-CCCccEEECCCCCEEEEEEecCCcceecc
Confidence 44568899999999999999887 99999997 66543221110 01 12456889999994 55553
Q ss_pred -----CCCcEEEEeCC--CccEEeec----ccCCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCC-CceeE--EEee--cc
Q psy17902 210 -----NNSNIKLWSSS--LEHLHTFT----GHKAPITGLAISFECDTLYSSSN-DRSIKVWNIE-DRAYV--ETLF--GH 272 (454)
Q Consensus 210 -----~dg~v~vw~~~--~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~-~~~~~--~~~~--~~ 272 (454)
.+|.+.+|++. +.....+. .+...+.+++|+|+|++|++++. ++.|++|++. +++.. ..+. .|
T Consensus 112 ~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~ 191 (365)
T 1jof_A 112 NPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDP 191 (365)
T ss_dssp EEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSST
T ss_pred ceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCC
Confidence 68999999983 44433332 25567999999999998887764 6799999998 67543 2333 24
Q ss_pred CCceeEEEeecCCCEEEEeeC-CCcEEEeecc--CCeEE----EEc-------cccC------CeEEE--EecCCCEEEE
Q psy17902 273 QSAITSLDILAKNRVISSGGT-DKSVRVWKIQ--EESQL----VFN-------GHSR------GIDMT--RRVNDQQFIT 330 (454)
Q Consensus 273 ~~~v~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~----~~~-------~~~~------~i~~~--~~~~~~~l~~ 330 (454)
...+..++|+|+|++|++++. ++.|.+|++. ++... .+. ++.. .+..+ +.+++++|++
T Consensus 192 g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 192 GDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 567899999999998887764 6899999875 44432 111 1121 24444 4456667776
Q ss_pred EeCC-C-----CEEEEecC-CCccceeeecccCCCCCCCCCCcEEEEEEec---CCCEEEEecCC-CcEEEEEcCCC
Q psy17902 331 CGED-G-----TLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITSVACLH---NSDLVASGSYD-GCVKLWKITPK 396 (454)
Q Consensus 331 ~~~d-g-----~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~---~~~~l~~~~~d-g~v~iwd~~~~ 396 (454)
+..+ + .|.+|++. ++........... +...+..++|+| +|++|++++.+ +.|.+|++...
T Consensus 272 ~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~------~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT------PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC------SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ECCCCCCCCCCeEEEEEECCCCCEEEeeeeeec------CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 6532 2 79999996 4543321110100 011145688999 89999988764 89999999765
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=4.4e-18 Score=151.23 Aligned_cols=245 Identities=10% Similarity=0.088 Sum_probs=176.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe-CCCcEEEEecC-CCcEEEEe
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA-NNNELVASGDN-NSNIKLWS 218 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~-dg~v~vw~ 218 (454)
|-..+.+++++++++++++...++.|.+||.. +.....+........+...+..+++. +++.++++... ++.|.+|+
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 56779999999999988888889999999987 44444333211112344578999994 67776666643 78999999
Q ss_pred CCCccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeCCC
Q psy17902 219 SSLEHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDK 295 (454)
Q Consensus 219 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg 295 (454)
.++..+..+. .+...+.+++++++++++++...++.|.+||.. +..+..+. .+...+.+|+++++++++++...++
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence 8777776664 344678999999999887777778999999965 55555553 3445689999999999888878899
Q ss_pred cEEEeeccCCeEEEEccc--cCCeEEEEe-cCCCEEEEEeCCC-CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902 296 SVRVWKIQEESQLVFNGH--SRGIDMTRR-VNDQQFITCGEDG-TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA 371 (454)
Q Consensus 296 ~i~i~d~~~~~~~~~~~~--~~~i~~~~~-~~~~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 371 (454)
.|++||........+... ......+.+ +++..+++...++ .|.+|+. .+..+..+.... ....+.+++
T Consensus 186 ~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~-------~~~~~~~i~ 257 (286)
T 1q7f_A 186 CVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV-------KHAQCFDVA 257 (286)
T ss_dssp EEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS-------CCSCEEEEE
T ss_pred EEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC-------CCCcceeEE
Confidence 999999865443344333 234445555 4566666666665 9999995 455555554322 122378999
Q ss_pred EecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 372 CLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 372 ~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
++|+|+++++ +.+++|++|++...
T Consensus 258 ~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 258 LMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ECCCCcEEEE-CCCCeEEEEEcccc
Confidence 9999987777 56899999998654
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=5.3e-18 Score=153.81 Aligned_cols=243 Identities=10% Similarity=0.052 Sum_probs=181.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC------------------------CeEEEEEcCCCceecccCCcccCCCCCCceEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKD------------------------GIIIKWLLETRSKVCSSPFVKTDRKSYPPILAL 196 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 196 (454)
--+.|.+++++|+|+++++...+ +.|.+||..++........ .+...+..+
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-----~~~~~p~gi 96 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK-----NLFYLPHGL 96 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT-----TTCSSEEEE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC-----CccCCceEE
Confidence 34569999999999999888777 4799999988776544321 344578999
Q ss_pred EEeCCCcEEEEecCCCcEEEEeCCCc--cEEee---------cccCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEeCCCc
Q psy17902 197 AVANNNELVASGDNNSNIKLWSSSLE--HLHTF---------TGHKAPITGLAISF-ECDTLYSSS-NDRSIKVWNIEDR 263 (454)
Q Consensus 197 ~~~~~~~~l~~~~~dg~v~vw~~~~~--~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~iwd~~~~ 263 (454)
+++++|+++++...++.|++|+..+. .+..+ ..+......++++| ++.++++.+ .++.|++|+ .++
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 99999998888888999999999665 45555 34455789999999 777777776 689999999 456
Q ss_pred eeEEEeec----------cCCceeEEEeecC-CCEEEEeeCCCcEEEeeccCCeEE-EE--ccccCCeEEEEecCCCEEE
Q psy17902 264 AYVETLFG----------HQSAITSLDILAK-NRVISSGGTDKSVRVWKIQEESQL-VF--NGHSRGIDMTRRVNDQQFI 329 (454)
Q Consensus 264 ~~~~~~~~----------~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~-~~--~~~~~~i~~~~~~~~~~l~ 329 (454)
..+..+.. +-....+|+++|+ +.++++...++.|++|+..+++.+ .+ ..+...+..+.+.++..+.
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEE
Confidence 66666532 2234789999998 777777788899999999877766 33 2233445555555532222
Q ss_pred E-------EeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 330 T-------CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 330 ~-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
+ ...+..|++|++.+++.+..+.... .+...+..++++|+|.++++...++.|++|++..
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~------~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR------KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCEEEEECCSS------SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC------CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 2 2345589999999998887764221 1344589999999998888888999999999864
No 167
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.84 E-value=5.8e-18 Score=154.89 Aligned_cols=259 Identities=10% Similarity=0.006 Sum_probs=176.9
Q ss_pred CCCeEEEEEcCCCCEEEEEe---------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-
Q psy17902 142 RASITCIAVTSDSKHVYSAC---------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN- 211 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 211 (454)
...+..+++ +|++|+... .++.|.+|++.++..... ..+..++|+|+|++|+.++.+
T Consensus 14 ~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----------~~~~~~~~SpDg~~la~~~~~~ 80 (347)
T 2gop_A 14 FAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----------ENATMPRISPDGKKIAFMRANE 80 (347)
T ss_dssp SCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----------ESCEEEEECTTSSEEEEEEEET
T ss_pred eEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----------ccCCCeEECCCCCEEEEEEecc
Confidence 344777888 888887653 257899999988754321 257889999999999887653
Q ss_pred --C--cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC---------------------------CcEEEEeC
Q psy17902 212 --S--NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND---------------------------RSIKVWNI 260 (454)
Q Consensus 212 --g--~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------------------------g~i~iwd~ 260 (454)
+ .|.+|++.+.....+..+.. +..++|+|+++.|+.++.+ ..|++||+
T Consensus 81 ~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~ 159 (347)
T 2gop_A 81 EKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDT 159 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEET
T ss_pred CCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEEC
Confidence 3 47778885555444444444 9999999999988887642 57999999
Q ss_pred CCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC-------cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeC
Q psy17902 261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK-------SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGE 333 (454)
Q Consensus 261 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 333 (454)
.+++.+..+.. . .+..+.|+|++ +++++..++ ...||.+.++....+..+ ..+... .+++..|+.++.
T Consensus 160 ~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~~~-~~~~~~-spdg~~l~~~~~ 234 (347)
T 2gop_A 160 ESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMFEK-VSFYAV-DSDGERILLYGK 234 (347)
T ss_dssp TTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEEEE-ESEEEE-EECSSCEEEEEC
T ss_pred CCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceEEeccC-cceeeE-CCCCCEEEEEEc
Confidence 98876445544 3 78899999999 877776542 344554445555444444 444444 677888877764
Q ss_pred C--------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEE-EEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902 334 D--------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITS-VACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD 404 (454)
Q Consensus 334 d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 404 (454)
+ ..|.+|| ++... .+.. .+...+.. +.|+ ++ ++++++.++.++|| +.++.... +..
T Consensus 235 ~~~~~~~~~~~l~~~d--~~~~~-~l~~--------~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~ 299 (347)
T 2gop_A 235 PEKKYMSEHNKLYIYD--GKEVM-GILD--------EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAK 299 (347)
T ss_dssp CSSSCCCSSCEEEEEC--SSCEE-ESST--------TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EEC
T ss_pred cccCCccccceEEEEC--CCceE-eccc--------cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-Eec
Confidence 4 3577777 43322 2211 12344775 8999 88 99999999999999 88655433 332
Q ss_pred CCCceeeeEEEEcCCCCEEEEEecCCCce-eeeeee
Q psy17902 405 IPLSGVINSLVFTSDHKHLVAGIGTEHRF-GRWKTI 439 (454)
Q Consensus 405 ~~~~~~v~~l~~s~d~~~l~~~~~~d~~i-~~W~~~ 439 (454)
+.+.|.+++|+| ..++++ +.++.. .+|...
T Consensus 300 --~~~~v~~~~~s~--~~~~~~-~~~~~~~~l~~~~ 330 (347)
T 2gop_A 300 --GRHWIMGFDVDE--IVVYLK-ETATRLRELFTWD 330 (347)
T ss_dssp --SSSEEEEEEESS--SEEEEE-ECSSSCCEEEEES
T ss_pred --CCCeEEeeeeeC--cEEEEE-cCCCChHHheEeC
Confidence 467899999999 566666 444443 667654
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=1.5e-18 Score=159.24 Aligned_cols=271 Identities=8% Similarity=0.030 Sum_probs=185.9
Q ss_pred CCCEEEEEe------CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----------CCcEEE
Q psy17902 153 DSKHVYSAC------KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----------NSNIKL 216 (454)
Q Consensus 153 ~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------dg~v~v 216 (454)
+++++++.. .|+.|.+||..+++....++. +..+ .++|+|++++|++++. ++.|.+
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~------g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v 85 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPT------AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEV 85 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEEC------CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecC------CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEE
Confidence 556666654 367999999998887765542 3333 8999999999998862 567999
Q ss_pred EeC-CCccEEeeccc------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEE-eeccCCceeEEEeecCC-
Q psy17902 217 WSS-SLEHLHTFTGH------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKN- 285 (454)
Q Consensus 217 w~~-~~~~~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~- 285 (454)
||. +.+.+..+... ......++|+|+|++|+++.. ++.|.+||+.+++.+.. +. +.. ...+.+.|++
T Consensus 86 ~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~ 163 (361)
T 2oiz_A 86 WDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRP 163 (361)
T ss_dssp EETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSS
T ss_pred EECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec-CCC-cceeEEcCCCC
Confidence 999 55666665432 345678999999999998874 58999999999988877 53 222 2335567766
Q ss_pred CEEEEeeCCCcEEEeeccC-CeEE-E------EccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc--eeeeccc
Q psy17902 286 RVISSGGTDKSVRVWKIQE-ESQL-V------FNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT--HTIPVAH 355 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~-~~~~-~------~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~ 355 (454)
..+++.+.||.+.+|++.. ++.. . +.....++.....+++..++..+.++.|.++|+...... ..+....
T Consensus 164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 243 (361)
T 2oiz_A 164 RSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLN 243 (361)
T ss_dssp SEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCC
T ss_pred eeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccC
Confidence 6778888999999999865 4433 1 111112222222344566777778899999998654322 1111100
Q ss_pred ---CCCCCCCCCCcEEEEEEecCCCEEEEecC-----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902 356 ---GYDSSSSEPNWITSVACLHNSDLVASGSY-----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK 421 (454)
Q Consensus 356 ---~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 421 (454)
..... .+.....++|+|+++.++++.. .+.|.+||+.+++.+..+.. +. +.+++|+|||+
T Consensus 244 ~~~~~~~~--~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~--~~--p~~ia~spdg~ 317 (361)
T 2oiz_A 244 DEDKAKNW--VPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPG--RD--ALSMTIDQQRN 317 (361)
T ss_dssp HHHHHTTC--EECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEEC--TT--CCEEEEETTTT
T ss_pred cccccccc--ccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEec--CC--eeEEEECCCCC
Confidence 00000 0000122789999887776543 34799999999998888875 33 99999999999
Q ss_pred EEEEEecCCCceeeeeeeCC
Q psy17902 422 HLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 422 ~l~~~~~~d~~i~~W~~~~~ 441 (454)
+|+++ +. +.|.+||..++
T Consensus 318 ~l~v~-n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 318 LMLTL-DG-GNVNVYDISQP 335 (361)
T ss_dssp EEEEE-CS-SCEEEEECSSS
T ss_pred EEEEe-CC-CeEEEEECCCC
Confidence 99988 45 99999998766
No 169
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=2.6e-18 Score=157.58 Aligned_cols=267 Identities=8% Similarity=0.034 Sum_probs=185.5
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEEEEeC----------CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVYSACK----------DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE 203 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 203 (454)
..+.. +..+ .++|+|++++|++++. ++.|.+||+.+.+....+........+......++|+|+|+
T Consensus 45 ~~i~~--g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~ 120 (361)
T 2oiz_A 45 GMVPT--AFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK 120 (361)
T ss_dssp EEEEC--CEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS
T ss_pred EEecC--CCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC
Confidence 34444 5444 8999999999999863 57899999998887766543211111234567899999999
Q ss_pred EEEEecC--CCcEEEEeC-CCccEEe-ecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-ceeEEE------eec
Q psy17902 204 LVASGDN--NSNIKLWSS-SLEHLHT-FTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIED-RAYVET------LFG 271 (454)
Q Consensus 204 ~l~~~~~--dg~v~vw~~-~~~~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-~~~~~~------~~~ 271 (454)
+|+++.. ++.|.+||+ +.+.+.. +. +.+ ...+.+.|++ ..+++.+.||.+.+|++.. ++.... +..
T Consensus 121 ~l~v~n~~~~~~v~v~d~~~~~~~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~ 198 (361)
T 2oiz_A 121 FIVLQNASPATSIGIVDVAKGDYVEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSV 198 (361)
T ss_dssp EEEEEEESSSEEEEEEETTTTEEEEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCT
T ss_pred EEEEECCCCCCeEEEEECCCCcEEEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcC
Confidence 9998864 579999999 5555555 33 222 2335667765 6788889999999999865 444311 122
Q ss_pred cCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc-----c----c----cCC-eEEEEecCCCEEEEEeC----
Q psy17902 272 HQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN-----G----H----SRG-IDMTRRVNDQQFITCGE---- 333 (454)
Q Consensus 272 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-----~----~----~~~-i~~~~~~~~~~l~~~~~---- 333 (454)
...++ .+.+++++..++..+.++.|.++|+......... . . ... -.....++++.++++..
T Consensus 199 ~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~ 277 (361)
T 2oiz_A 199 KDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGK 277 (361)
T ss_dssp TTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCC
T ss_pred CCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCC
Confidence 22222 3344677777777778899999999765432111 0 0 011 11344556676665543
Q ss_pred -------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC--ceeeEecc
Q psy17902 334 -------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK--RTLEFLQD 404 (454)
Q Consensus 334 -------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~--~~~~~~~~ 404 (454)
.+.|.+||+.+.+.+.+++... +.+++|+|+|++|++++. ++|.+||..++ +.+..+..
T Consensus 278 ~~~~~~~~~~v~viD~~t~~~v~~i~~~~-----------p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~ 345 (361)
T 2oiz_A 278 EGTHKFPAAEIWVMDTKTKQRVARIPGRD-----------ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEG 345 (361)
T ss_dssp TTCTTCCCSEEEEEETTTTEEEEEEECTT-----------CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETT
T ss_pred cccccCCCceEEEEECCCCcEEEEEecCC-----------eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEecc
Confidence 3479999999999998887532 678999999999998887 99999999999 88877643
Q ss_pred CCCceeeeEEEEcCCCC
Q psy17902 405 IPLSGVINSLVFTSDHK 421 (454)
Q Consensus 405 ~~~~~~v~~l~~s~d~~ 421 (454)
.......++|+|+|+
T Consensus 346 --~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 346 --AAEASLQVQFHPVGG 360 (361)
T ss_dssp --SCSSEEEEEECCCSC
T ss_pred --CCCCcEEEEecCCCC
Confidence 566678899999986
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=2.6e-18 Score=171.40 Aligned_cols=292 Identities=9% Similarity=0.001 Sum_probs=189.8
Q ss_pred EeEeccCCCCCCeEEEEEcCCCCEEEEE--eCCCeEEEEEcCCCceecccCCcccCCCCCCceE---------EEEEe--
Q psy17902 133 CTKFNGKPHRASITCIAVTSDSKHVYSA--CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPIL---------ALAVA-- 199 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~---------~~~~~-- 199 (454)
...+.+ |...|..++|++++-++++. +.++...||....+.....+. .+...+. ...|+
T Consensus 16 ~~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~------~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 16 AALVAS--RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESAL------PAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp HHHHHH--TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESS------CTTCCBCCCGGGTCCCCEEEECC
T ss_pred HHHHhh--cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeC------CCCccccccccccCCccceeeee
Confidence 345667 99999999999876666666 457899999864333333322 1222333 45555
Q ss_pred CCCcE-EEEecC-CCcEEEEeCC--C-ccEEeecc-----cCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEe
Q psy17902 200 NNNEL-VASGDN-NSNIKLWSSS--L-EHLHTFTG-----HKAPITGLAISFECDTLYSSSND----------RSIKVWN 259 (454)
Q Consensus 200 ~~~~~-l~~~~~-dg~v~vw~~~--~-~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d----------g~i~iwd 259 (454)
|||+. |+.++. +..|.++++. + .....+.. |...+.+++|+|||+.|++++.+ ..|++||
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~ 167 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVP 167 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEE
Confidence 99988 776654 5677777776 4 55566655 67788999999999999998876 5899999
Q ss_pred CCC------ceeEEEee-ccCCceeEEEeecCCCEEEEeeCC--------CcEEEeecc-CC---eEEEEc-cccCCeEE
Q psy17902 260 IED------RAYVETLF-GHQSAITSLDILAKNRVISSGGTD--------KSVRVWKIQ-EE---SQLVFN-GHSRGIDM 319 (454)
Q Consensus 260 ~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~-~~---~~~~~~-~~~~~i~~ 319 (454)
+.+ +.. ..+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ ....+. .+...+..
T Consensus 168 ~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~ 246 (662)
T 3azo_A 168 LDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQ 246 (662)
T ss_dssp TTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEE
T ss_pred CCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcc
Confidence 988 554 3444 556788899999999999877755 379999998 56 444333 33456655
Q ss_pred EEec-CCCEEEEEeCCC--CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc--C
Q psy17902 320 TRRV-NDQQFITCGEDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI--T 394 (454)
Q Consensus 320 ~~~~-~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~--~ 394 (454)
..|. ++.+++++..++ .|.+||+.++............. ...-...+..++|+|++.++++++. +.++||.+ .
T Consensus 247 ~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~-~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~ 324 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFA-GPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPE 324 (662)
T ss_dssp EEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSS-CCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred eEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccccc-CccccccCceEeEeCCCEEEEEEEc-CccEEEEEECC
Confidence 5554 566666777777 56666665554433222111110 0000011456899999999999998 99999944 4
Q ss_pred CCceeeEeccCCCceeeeEEEEcCCCCEE-EEEecCCCceeeeeee
Q psy17902 395 PKRTLEFLQDIPLSGVINSLVFTSDHKHL-VAGIGTEHRFGRWKTI 439 (454)
Q Consensus 395 ~~~~~~~~~~~~~~~~v~~l~~s~d~~~l-~~~~~~d~~i~~W~~~ 439 (454)
++. +..+.. +.+.+..+. ++++..+ +++.+.+....+|...
T Consensus 325 ~~~-~~~l~~--~~~~~~~~~-s~~~~~~~~~~~~~~~~~~i~~~d 366 (662)
T 3azo_A 325 SGE-LVDAAG--PWTEWAATL-TVSGTRAVGVAASPRTAYEVVELD 366 (662)
T ss_dssp TTE-EEECCS--SCCEEEEEE-EEETTEEEEEEEETTEEEEEEEEE
T ss_pred CCc-EEEecC--CCCeEEEEE-ecCCCEEEEEEcCCCCCCEEEEEE
Confidence 444 555654 556677661 4445444 3443555555555443
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.83 E-value=4.5e-18 Score=154.69 Aligned_cols=274 Identities=9% Similarity=-0.031 Sum_probs=186.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL 221 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~ 221 (454)
...|.+++|++++..++..+.++.++.|. ......+. .+...+.+++|++++++++++..++.|.+|+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~ 75 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEIS------KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPET 75 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEE------SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTT
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeEEEe------ccCccccCcEECCCCCEEEEECCCCEEEEEeCCC
Confidence 34578889999888887778888999993 22222222 2445678999999999888888899999999955
Q ss_pred ccEEee-cccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEeeC-
Q psy17902 222 EHLHTF-TGHKAPITGLAISFECDTLYSSSND----RSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGT- 293 (454)
Q Consensus 222 ~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~- 293 (454)
..+..+ ..+...+.+++++++++++++...+ +.|.+||..++.....+. .+...+.+++++|+++++++...
T Consensus 76 ~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 155 (333)
T 2dg1_A 76 KEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRG 155 (333)
T ss_dssp CCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCC
T ss_pred CcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccc
Confidence 444433 3567789999999999877777666 689999998776543332 24457899999999988776653
Q ss_pred -----CCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCC-Cccceeee--cccCCCCCCCC
Q psy17902 294 -----DKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILK-KVPTHTIP--VAHGYDSSSSE 363 (454)
Q Consensus 294 -----dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~-~~~~~~~~--~~~~~~~~~~~ 363 (454)
.+.|..|+..++....+.........+.+. ++..++ +.+.++.|.+|++.. +..+..+. ...... .
T Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~---~- 231 (333)
T 2dg1_A 156 YSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFT---G- 231 (333)
T ss_dssp BTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECC---S-
T ss_pred cccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecC---C-
Confidence 356777776655554333333334455554 555554 445678999999964 33322211 000000 0
Q ss_pred CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCC----ceeeeEEEEcCCCCEEEEEecC
Q psy17902 364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL----SGVINSLVFTSDHKHLVAGIGT 429 (454)
Q Consensus 364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~----~~~v~~l~~s~d~~~l~~~~~~ 429 (454)
...+..++++++|+++++...++.|.+|+. .++.+..+..... ...+.+++|+||+..|++++..
T Consensus 232 ~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 232 HEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp SSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 124788999999998888877889999998 4666666543111 1168899999999888776443
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=1.9e-17 Score=166.11 Aligned_cols=245 Identities=10% Similarity=0.015 Sum_probs=173.5
Q ss_pred CCCceEEEEEeCCCcEEEEecCCC-----cEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCc---------
Q psy17902 189 SYPPILALAVANNNELVASGDNNS-----NIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRS--------- 254 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~~l~~~~~dg-----~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------- 254 (454)
+...+..++|||||++||.+..++ .|++||+.+............+.+++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~ 202 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTET 202 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccc
Confidence 444688999999999998776543 899999954443332222233678999999999999988766
Q ss_pred -------EEEEeCCCcee--EEEee--ccCCceeEEEeecCCCEEEEeeC-----CCcEEEeeccC------C--eEEEE
Q psy17902 255 -------IKVWNIEDRAY--VETLF--GHQSAITSLDILAKNRVISSGGT-----DKSVRVWKIQE------E--SQLVF 310 (454)
Q Consensus 255 -------i~iwd~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~------~--~~~~~ 310 (454)
|++|++.++.. ...+. .|...+.++.|+|+|++|+.++. +..|++||+.+ + ....+
T Consensus 203 ~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 203 STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 99999988752 22222 34556789999999998887764 56899999986 4 34455
Q ss_pred ccccCCeEEEEecCCCEEEEEeCC----CCEEEEecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902 311 NGHSRGIDMTRRVNDQQFITCGED----GTLSLWSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY 384 (454)
Q Consensus 311 ~~~~~~i~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 384 (454)
..+...+...+.++++.|+..+.. +.|.+||+.++.. ...+..... ...+..++|++++.++++...
T Consensus 283 ~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-------~~~~~~~~~~~~~~lv~~~~~ 355 (710)
T 2xdw_A 283 IDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-------KDVLEWVACVRSNFLVLCYLH 355 (710)
T ss_dssp ECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-------SCEEEEEEEETTTEEEEEEEE
T ss_pred eCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-------CCeEEEEEEEcCCEEEEEEEE
Confidence 555555666677778877766643 3599999987642 233322111 124888999988888888888
Q ss_pred CCc--EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec---CCCceeeeeeeCCC
Q psy17902 385 DGC--VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG---TEHRFGRWKTIKGV 442 (454)
Q Consensus 385 dg~--v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~---~d~~i~~W~~~~~~ 442 (454)
++. |.+|++.+++.+..+.. +.+.+..++++|++..|+.+.+ ..+.|.+|+..++.
T Consensus 356 ~g~~~l~~~~~~~g~~~~~l~~--~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 356 DVKNTLQLHDLATGALLKIFPL--EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTEEEEEEEETTTCCEEEEECC--CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCEEEEEEEECCCCCEEEecCC--CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 885 56667767776677765 4677899999999987765433 35788888876554
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=2.6e-17 Score=146.26 Aligned_cols=242 Identities=12% Similarity=0.136 Sum_probs=173.0
Q ss_pred CCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeec------ccCCCeEEEEEc-CCCCEEEEEeC-CCcEEEEe
Q psy17902 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT------GHKAPITGLAIS-FECDTLYSSSN-DRSIKVWN 259 (454)
Q Consensus 188 ~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~------~~~~~v~~~~~~-~~~~~l~~~~~-dg~i~iwd 259 (454)
++...+.++++++++.++++...++.|.+|+..+..+..+. .+...+.++++. +++.++++... ++.|.+||
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 45567899999999998888888899999999877666653 244678999994 66655555533 78999999
Q ss_pred CCCceeEEEee-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc--cccCCeEEEEecC-CCEEEEEeCCC
Q psy17902 260 IEDRAYVETLF-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN--GHSRGIDMTRRVN-DQQFITCGEDG 335 (454)
Q Consensus 260 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~-~~~l~~~~~dg 335 (454)
.+++.+..+. .+...+.+++++++++++++...++.|.+||........+. .+......+.+.+ +..+++.+.++
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence 5566666553 24457899999999998888778899999997644333332 2333455565554 45555556789
Q ss_pred CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC-cEEEEEcCCCceeeEeccCCCceeeeEE
Q psy17902 336 TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG-CVKLWKITPKRTLEFLQDIPLSGVINSL 414 (454)
Q Consensus 336 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-~v~iwd~~~~~~~~~~~~~~~~~~v~~l 414 (454)
.|++||.. +..+..+.... +...+..++++++|+++++...++ .|.+|+. .++.+..+........+.++
T Consensus 186 ~i~~~~~~-g~~~~~~~~~g-------~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 186 CVKVFNYE-GQYLRQIGGEG-------ITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDV 256 (286)
T ss_dssp EEEEEETT-CCEEEEESCTT-------TSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEE
T ss_pred EEEEEcCC-CCEEEEEccCC-------ccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeE
Confidence 99999974 44444443211 123489999999999888888776 9999995 45666666543233347899
Q ss_pred EEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 415 VFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 415 ~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
+|+|+|+.+++ +.+++|.+|+....
T Consensus 257 ~~~~~g~l~vs--~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 257 ALMDDGSVVLA--SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEETTTEEEEE--ETTTEEEEEECSCC
T ss_pred EECCCCcEEEE--CCCCeEEEEEcccc
Confidence 99999975555 36899999987543
No 174
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=1.3e-18 Score=159.16 Aligned_cols=245 Identities=10% Similarity=0.067 Sum_probs=159.4
Q ss_pred CeEEEEEcCCCCEEEE-EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----------
Q psy17902 144 SITCIAVTSDSKHVYS-ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN----------- 211 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------- 211 (454)
.+..++|+|+++++++ +..++.|.+||+.+++....+............+.+++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 5789999999987654 4568999999999887665543210000002237789999999999998865
Q ss_pred -CcEEEEeCCC-c---cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC------------
Q psy17902 212 -SNIKLWSSSL-E---HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS------------ 274 (454)
Q Consensus 212 -g~v~vw~~~~-~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------------ 274 (454)
+.|.+||+.. . .+..+. +...+.+++|+|+++ +++++ +.|.+||+.+++.+..+..+..
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 8999999833 2 223333 344688999999999 66654 4499999999987776643320
Q ss_pred ------------ceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEE--EEccccCCeEEEE-ec-CCCEEEEEeCCCCE
Q psy17902 275 ------------AITSLDILAKNRVISSGG-TDKSVRVWKIQEESQL--VFNGHSRGIDMTR-RV-NDQQFITCGEDGTL 337 (454)
Q Consensus 275 ------------~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~~~~~~i~~~~-~~-~~~~l~~~~~dg~i 337 (454)
...++++++++....... ....+..++..++... ....+......+. .+ ++.+++++ ++.|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v 277 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRL 277 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeE
Confidence 234456655432110000 0011122444443322 1112233334444 45 56677766 8899
Q ss_pred EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902 338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD 404 (454)
Q Consensus 338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 404 (454)
.+||+.+++.+..+.... .+.+++|+|++++|++++.++.|.+||+.+++.+..+..
T Consensus 278 ~~~d~~~~~~~~~~~~~~----------~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 278 AKYDLKQRKLIKAANLDH----------TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp EEEETTTTEEEEEEECSS----------CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred EEEECccCeEEEEEcCCC----------CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 999999988877776422 167899999999888888899999999999887777654
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=4.7e-17 Score=147.54 Aligned_cols=243 Identities=12% Similarity=0.067 Sum_probs=174.3
Q ss_pred CCCceEEEEEeCCCcEEEEecCC------------------------CcEEEEeC-CCccEEeec-ccCCCeEEEEEcCC
Q psy17902 189 SYPPILALAVANNNELVASGDNN------------------------SNIKLWSS-SLEHLHTFT-GHKAPITGLAISFE 242 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~~l~~~~~d------------------------g~v~vw~~-~~~~~~~~~-~~~~~v~~~~~~~~ 242 (454)
....+.+++++++|+++++...+ +.|.+||. ++..+..+. .+-..+..++++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTD 101 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCC
Confidence 34579999999999999888777 47999999 466555443 34467899999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCce-eEEEe---------eccCCceeEEEeec-CCCEEEEee-CCCcEEEeeccCCeEE-E
Q psy17902 243 CDTLYSSSNDRSIKVWNIEDRA-YVETL---------FGHQSAITSLDILA-KNRVISSGG-TDKSVRVWKIQEESQL-V 309 (454)
Q Consensus 243 ~~~l~~~~~dg~i~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~dg~i~i~d~~~~~~~-~ 309 (454)
++++++...++.|++||..... .+..+ ..+......|+++| ++.++++.+ .++.|++|+.. +..+ .
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~~~~~ 180 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GKFVTQ 180 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CCEEEE
Confidence 9988888889999999986542 34444 23444688999999 788888776 68999999954 4444 3
Q ss_pred Eccc----------cCCeEEEEec-C-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec---
Q psy17902 310 FNGH----------SRGIDMTRRV-N-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH--- 374 (454)
Q Consensus 310 ~~~~----------~~~i~~~~~~-~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~--- 374 (454)
+... ......+.+. + +..+++...++.|++|+..+++.+..+.... +...+..++|+|
T Consensus 181 ~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~-------~~~~~~~~~~~pg~~ 253 (329)
T 3fvz_A 181 WGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS-------FGRNVFAISYIPGFL 253 (329)
T ss_dssp ECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT-------TTTCEEEEEEETTEE
T ss_pred eccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc-------cCCCcceeeecCCEE
Confidence 3221 1224445544 4 4556666688999999998888777764321 233488899999
Q ss_pred ---CCCEEEEecCCCcEEEEEcCCCceeeEecc-CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 375 ---NSDLVASGSYDGCVKLWKITPKRTLEFLQD-IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 375 ---~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~-~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
+|+..++...+..|++|++.+++.+..+.. ..+...+.+|+++|+| .|+++...+++|++|+...
T Consensus 254 ~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 254 FAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEE
T ss_pred EEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCc
Confidence 333333334456899999999988887742 1245668999999999 4555547889999998754
No 176
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.80 E-value=2.2e-17 Score=165.21 Aligned_cols=280 Identities=10% Similarity=-0.010 Sum_probs=184.3
Q ss_pred CCCCEEEEEeCCC-----eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEE-----ecCCCcEEEEeCCC
Q psy17902 152 SDSKHVYSACKDG-----IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVAS-----GDNNSNIKLWSSSL 221 (454)
Q Consensus 152 ~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-----~~~dg~v~vw~~~~ 221 (454)
|+|.+++....++ .|.+.+...+.....+.......+|...+..++|||||++||. |+.+..|++||+.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~t 156 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDS 156 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTT
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCC
Confidence 6777777665543 2344444333322222111111234557899999999999984 44457899999944
Q ss_pred ccEEeecccCCCe--EEEEEcCCCCEEEEEeCCCc-------------EEEEeCCCce----eEEEeeccCCceeEEEee
Q psy17902 222 EHLHTFTGHKAPI--TGLAISFECDTLYSSSNDRS-------------IKVWNIEDRA----YVETLFGHQSAITSLDIL 282 (454)
Q Consensus 222 ~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~dg~-------------i~iwd~~~~~----~~~~~~~~~~~v~~~~~~ 282 (454)
..... ..+...+ ..++|+|||+.|+.++.+.. |++|++.++. .+.....|...+.++.|+
T Consensus 157 g~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~S 235 (695)
T 2bkl_A 157 GEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLS 235 (695)
T ss_dssp CCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEEC
T ss_pred CCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEEC
Confidence 33320 1121222 67899999999999998776 9999998875 333333455678899999
Q ss_pred cCCCEEEEeeCCC----cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeC----CCCEEEEecCCCcc--ceeee
Q psy17902 283 AKNRVISSGGTDK----SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGE----DGTLSLWSILKKVP--THTIP 352 (454)
Q Consensus 283 ~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~~--~~~~~ 352 (454)
|+|++|+.++.++ .|++|+..++....+..+........++++. |+..+. ++.|.+||+.++.. ...+.
T Consensus 236 pDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 236 RDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp TTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred CCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 9999888877666 6777877665555555555555555556666 555453 57899999977653 22222
Q ss_pred cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEEEEcCCCCEEEEEec---
Q psy17902 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG--- 428 (454)
Q Consensus 353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~--- 428 (454)
... ....+..++|+ ++.++++...|+..+||.+. .+.....+.. +..+.+..++++|++..|+.+.+
T Consensus 315 ~~~-------~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~~ss~~ 385 (695)
T 2bkl_A 315 PED-------SSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQL-PGVGAASNLMGLEDLDDAYYVFTSFT 385 (695)
T ss_dssp CCC-------SSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCC-SSSSEECCCBSCTTCSEEEEEEEETT
T ss_pred cCC-------CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecC-CCCeEEEEeecCCCCCEEEEEEcCCC
Confidence 111 12337888888 67788899999998888765 3555555543 23667888999999988775533
Q ss_pred CCCceeeeeeeCCC
Q psy17902 429 TEHRFGRWKTIKGV 442 (454)
Q Consensus 429 ~d~~i~~W~~~~~~ 442 (454)
..+.|++|+..++.
T Consensus 386 ~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 386 TPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEEEEETTTCC
T ss_pred CCCEEEEEECCCCc
Confidence 35778999876654
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=1e-17 Score=155.66 Aligned_cols=239 Identities=9% Similarity=-0.007 Sum_probs=159.3
Q ss_pred EEEeCCCcEEEEecC-CC--cEEEEeCCC-ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec
Q psy17902 196 LAVANNNELVASGDN-NS--NIKLWSSSL-EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG 271 (454)
Q Consensus 196 ~~~~~~~~~l~~~~~-dg--~v~vw~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 271 (454)
.+|+|||++|++++. +| .|.+||+.+ ........+...+..+.|+|+++.|+.++.++.|++||+.+++....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 789999999998887 66 488888844 44444455555555778999999999999999999999999987766666
Q ss_pred cCCceeEEE--eecCCCEEEEe----------------------eCCCcEEEeeccCCeEEEEccccCCeEEEEecC--C
Q psy17902 272 HQSAITSLD--ILAKNRVISSG----------------------GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVN--D 325 (454)
Q Consensus 272 ~~~~v~~~~--~~~~~~~l~~~----------------------~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~--~ 325 (454)
+...+.... ++|++.+++.. ..+..|++||+.++....+..+...+....+++ +
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg 200 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDD 200 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEE
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCC
Confidence 666554444 47899888742 234689999999988776666666666555554 5
Q ss_pred CEEEEEeCC------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CC----cEEEEEcC
Q psy17902 326 QQFITCGED------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DG----CVKLWKIT 394 (454)
Q Consensus 326 ~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg----~v~iwd~~ 394 (454)
..|+.++.+ ..|.++|+..+... .+.... ....+..+.|+|+|+.|+..+. ++ .|++||+.
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~-------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 272 (388)
T 3pe7_A 201 STVAFCHEGPHDLVDARMWLINEDGTNMR-KVKTHA-------EGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPE 272 (388)
T ss_dssp EEEEEEECSCTTTSSCSEEEEETTSCCCE-ESCCCC-------TTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTT
T ss_pred CEEEEEEecCCCCCcceEEEEeCCCCceE-EeeeCC-------CCcccccceECCCCCEEEEEecCCCCCcceEEEEecC
Confidence 667666643 37888887654332 221111 1123778999999997655433 22 39999999
Q ss_pred CCceeeEeccCCCce---eeeEEEEcCCCCEEEEEe--------cCCCceeeeeeeCCC
Q psy17902 395 PKRTLEFLQDIPLSG---VINSLVFTSDHKHLVAGI--------GTEHRFGRWKTIKGV 442 (454)
Q Consensus 395 ~~~~~~~~~~~~~~~---~v~~l~~s~d~~~l~~~~--------~~d~~i~~W~~~~~~ 442 (454)
+++.........+.. ....++|+|||+.|+... +.+..|++|+...+.
T Consensus 273 ~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (388)
T 3pe7_A 273 TLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT 331 (388)
T ss_dssp TCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE
T ss_pred CCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc
Confidence 886432222111111 122347999999988653 446689999876654
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.79 E-value=7.2e-15 Score=131.12 Aligned_cols=277 Identities=12% Similarity=0.040 Sum_probs=192.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
+...+.+++++++|+++++...++.|.+||.. +.... +... .....+.++++.+++.++++...++.|..|+..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~-~~~~----~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITE-YPLP----TPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEE-EECS----STTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEE-ecCC----cccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 66789999999999987776668899999988 44322 1110 134578999999999988887778899999986
Q ss_pred CccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE-eeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902 221 LEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKNRVISSGGTDKSV 297 (454)
Q Consensus 221 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 297 (454)
+.. ..+ ......+.++++.+++.++++...++.|.+||. ++..... ...+...+.++++.++++++++...++.|
T Consensus 87 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 87 GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 432 222 234567899999999987777777889999998 5544322 22345668999999999888877677899
Q ss_pred EEeeccCCeEEEE--ccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902 298 RVWKIQEESQLVF--NGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH 374 (454)
Q Consensus 298 ~i~d~~~~~~~~~--~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 374 (454)
..||. ++....+ ......+..+.+. ++..+++...++.|.+||. ++... .+.... ....+.++++++
T Consensus 165 ~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~-------~~~~~~~i~~~~ 234 (299)
T 2z2n_A 165 GRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPT-------PNARPHAITAGA 234 (299)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSS-------TTCCEEEEEECS
T ss_pred EEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCC-------CCCCceeEEECC
Confidence 99999 6555433 2223344555554 4555555556788999998 55432 232211 223489999999
Q ss_pred CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
+|+++++...++.|.+|+. ++. +..+........+.++++ ++|...+++ . .+.|..++..+
T Consensus 235 ~g~l~v~~~~~~~i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~g~l~v~~-~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 235 GIDLWFTEWGANKIGRLTS-NNI-IEEYPIQIKSAEPHGICF-DGETIWFAM-E-CDKIGKLTLIK 295 (299)
T ss_dssp TTCEEEEETTTTEEEEEET-TTE-EEEEECSSSSCCEEEEEE-CSSCEEEEE-T-TTEEEEEEEC-
T ss_pred CCCEEEeccCCceEEEECC-CCc-eEEEeCCCCCCccceEEe-cCCCEEEEe-c-CCcEEEEEcCc
Confidence 9997777767789999998 443 333322224467899999 888877765 3 56676666543
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=5e-17 Score=162.07 Aligned_cols=252 Identities=9% Similarity=-0.071 Sum_probs=162.8
Q ss_pred EeEeccCCCCCCeE---------EEEEc--CCCCE-EEEEeC-CCeEEEEEcC--C-CceecccCCcccCCCCCCceEEE
Q psy17902 133 CTKFNGKPHRASIT---------CIAVT--SDSKH-VYSACK-DGIIIKWLLE--T-RSKVCSSPFVKTDRKSYPPILAL 196 (454)
Q Consensus 133 ~~~~~~~~h~~~V~---------~~~~s--~~~~~-l~~~~~-dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~v~~~ 196 (454)
.+.+.. |...|. ...|+ |||+. |+.++. +..|.+|++. + +... .+... ....+...+..+
T Consensus 60 ~~~l~~--~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~~~-~~~~~~~~~~~~ 135 (662)
T 3azo_A 60 EESALP--APWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLTPV-SAVGGGLRWADP 135 (662)
T ss_dssp EEESSC--TTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECSCC-CCSTTCEEEEEE
T ss_pred cceeCC--CCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE-eccCC-ccCCCCccccCc
Confidence 345555 665655 56565 99998 776654 4667777765 2 3322 22110 000145578899
Q ss_pred EEeCCCcEEEEecCC----------CcEEEEeCCC------ccEEeec-ccCCCeEEEEEcCCCCEEEEEeCC-------
Q psy17902 197 AVANNNELVASGDNN----------SNIKLWSSSL------EHLHTFT-GHKAPITGLAISFECDTLYSSSND------- 252 (454)
Q Consensus 197 ~~~~~~~~l~~~~~d----------g~v~vw~~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d------- 252 (454)
+|+|||+.|++++.+ ..|++|++.+ .....+. .+...+..++|+|||++|+.++.+
T Consensus 136 ~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~ 215 (662)
T 3azo_A 136 VLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWE 215 (662)
T ss_dssp EEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTT
T ss_pred EECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCC
Confidence 999999999998876 5899999966 5666666 666788889999999999987754
Q ss_pred -CcEEEEeCC-Cc---eeEEEeeccCCceeEEEeecCCCEEEEeeCCC--cEEEeeccCCeEEEEccccCC---------
Q psy17902 253 -RSIKVWNIE-DR---AYVETLFGHQSAITSLDILAKNRVISSGGTDK--SVRVWKIQEESQLVFNGHSRG--------- 316 (454)
Q Consensus 253 -g~i~iwd~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~--------- 316 (454)
..|++||+. ++ .......+|...+..+.|+|+|++++++..++ .|++||+.++....+..+...
T Consensus 216 ~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~ 295 (662)
T 3azo_A 216 GTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPG 295 (662)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTT
T ss_pred CcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCcccccc
Confidence 379999998 56 44444445678899999999999888888888 666667666665543332221
Q ss_pred eEEEEe-cCCCEEEEEeCCCCEEEE--ecCCCccceeeecccCCCCCCCCCCcEEEE-EEecCCCEEEEecCCCc--EEE
Q psy17902 317 IDMTRR-VNDQQFITCGEDGTLSLW--SILKKVPTHTIPVAHGYDSSSSEPNWITSV-ACLHNSDLVASGSYDGC--VKL 390 (454)
Q Consensus 317 i~~~~~-~~~~~l~~~~~dg~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~s~~~~~l~~~~~dg~--v~i 390 (454)
+..+.+ +++..+++++. +.++|| |+.++. +..+.. +...+..+ +++++.-++++++.+.. |.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~---------~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG---------PWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp CCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS---------SCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred CceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC---------CCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 223333 46677778878 999999 544443 333322 22336666 44333334444555544 555
Q ss_pred EEcCCCcee
Q psy17902 391 WKITPKRTL 399 (454)
Q Consensus 391 wd~~~~~~~ 399 (454)
||+.+++..
T Consensus 365 ~d~~~g~~~ 373 (662)
T 3azo_A 365 LDTVTGRAR 373 (662)
T ss_dssp EETTTCCEE
T ss_pred EECCCCceE
Confidence 566566543
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.78 E-value=3.1e-16 Score=137.82 Aligned_cols=251 Identities=12% Similarity=0.056 Sum_probs=188.5
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCC-CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeeccc-
Q psy17902 153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSY-PPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGH- 230 (454)
Q Consensus 153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~- 230 (454)
.+++|++++.++.|.+||.++++.+..+.. +. ..+.+++++|+|++|++ .++.|..||.+++.+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~------~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~~G~~~W~~~~~~ 75 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPL------EKGWECNSVAATKAGEILFS--YSKGAKMITRDGRELWNIAAPA 75 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEEC------CTTCCCCEEEECTTSCEEEE--CBSEEEEECTTSCEEEEEECCT
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCC------CccCCCcCeEECCCCCEEEe--CCCCEEEECCCCCEEEEEcCCC
Confidence 357999999999999999999998877763 22 36788999999998884 467899999988888888765
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CCcEEEEeCCCceeEEEee------ccCCceeEEEeecCCCEEEEeeCCCcEEEeecc
Q psy17902 231 KAPITGLAISFECDTLYSSSN-DRSIKVWNIEDRAYVETLF------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ 303 (454)
Q Consensus 231 ~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 303 (454)
...+.++.+.++|+++++.+. ++.|..+|. +++.+..+. .+......+++.++|+++++...++.|.+||..
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 357889999999999999887 788888886 577666654 122345567788999999999999999999998
Q ss_pred CCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe
Q psy17902 304 EESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG 382 (454)
Q Consensus 304 ~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 382 (454)
++.+ .+.....+......++++.+++++.++.|..+|..+++.+..+....... ..-..+..+...++|+++++.
T Consensus 155 -G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~---~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 155 -GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEG---VQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBS---CCCSEEEEEEECTTSCEEEEE
T ss_pred -CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCC---ccccccccceEcCCCCEEEEe
Confidence 6666 55444444555556678888888888899999999999998886432110 023448889999999988877
Q ss_pred cCC--------CcEEEEEc-CCCceeeEeccCCCceeeeEEEE
Q psy17902 383 SYD--------GCVKLWKI-TPKRTLEFLQDIPLSGVINSLVF 416 (454)
Q Consensus 383 ~~d--------g~v~iwd~-~~~~~~~~~~~~~~~~~v~~l~~ 416 (454)
... +..+++.+ .+++.+-.+.....-+.+.++|.
T Consensus 231 ~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~~~~~~~~~~~~ 273 (276)
T 3no2_A 231 WQGHDREAGKGKHPQLVEIDSEGKVVWQLNDKVKFGMISTICP 273 (276)
T ss_dssp ECTTCTTGGGSCCCSEEEECTTSBEEEEECCTTTSCCCCEEEE
T ss_pred ccCccccccccCCceEEEECCCCCEEEEecCcccccceeeeee
Confidence 421 23466666 45677666666555566666653
No 181
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=3.4e-16 Score=157.77 Aligned_cols=265 Identities=14% Similarity=0.043 Sum_probs=169.0
Q ss_pred EEEEEcCCCCEEEEEeCC---------CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE
Q psy17902 146 TCIAVTSDSKHVYSACKD---------GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL 216 (454)
Q Consensus 146 ~~~~~s~~~~~l~~~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v 216 (454)
..++|||||++|+.++.+ +.+.+||+.+++.... . .+...+...+|||||+.||.+. ++.|++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l-~------~~~~~~~~~~~SPdG~~la~~~-~~~i~~ 136 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITE-E------RIPNNTQWVTWSPVGHKLAYVW-NNDIYV 136 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-S------CCCTTEEEEEECSSTTCEEEEE-TTEEEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEc-c------cCCCcceeeEECCCCCEEEEEE-CCeEEE
Confidence 447899999999998876 6677999998875432 2 3556799999999999999985 689999
Q ss_pred EeCCCccEEee--cccCCCe-----------------EEEEEcCCCCEEEEEeCCC------------------------
Q psy17902 217 WSSSLEHLHTF--TGHKAPI-----------------TGLAISFECDTLYSSSNDR------------------------ 253 (454)
Q Consensus 217 w~~~~~~~~~~--~~~~~~v-----------------~~~~~~~~~~~l~~~~~dg------------------------ 253 (454)
|++.+.....+ .++...+ .++.|||||+.|+.++.|.
T Consensus 137 ~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~ 216 (740)
T 4a5s_A 137 KIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRV 216 (740)
T ss_dssp ESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEE
T ss_pred EECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceee
Confidence 99944333332 2333223 3589999999999875321
Q ss_pred ------------cEEEEeCCC---ce--eEEEee------ccCCceeEEEeecCCCEEEEeeC----CCcEEEeeccCCe
Q psy17902 254 ------------SIKVWNIED---RA--YVETLF------GHQSAITSLDILAKNRVISSGGT----DKSVRVWKIQEES 306 (454)
Q Consensus 254 ------------~i~iwd~~~---~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~ 306 (454)
.|++||+.+ +. ....+. +|...+..++|+|+|+.++.... +..|++||+.+++
T Consensus 217 ~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 217 PYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 488899988 73 222333 37788999999999986665432 3479999999876
Q ss_pred ----EE---E--EccccCCe------EEEEecCCCEEE-EEe-CCC--CEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902 307 ----QL---V--FNGHSRGI------DMTRRVNDQQFI-TCG-EDG--TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI 367 (454)
Q Consensus 307 ----~~---~--~~~~~~~i------~~~~~~~~~~l~-~~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i 367 (454)
+. . ...+...+ ...+.+++..|+ ..+ .+| .|++||+..+....... . ...+
T Consensus 297 ~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~-g---------~~~v 366 (740)
T 4a5s_A 297 GRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITK-G---------TWEV 366 (740)
T ss_dssp TEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCC-S---------SSCE
T ss_pred cccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEeccc-C---------CEEE
Confidence 22 1 13343322 234556777666 555 344 57778887654432221 1 1115
Q ss_pred EEEEEecCCCE-EEEecC----CCcEEEEEcC--CCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecC
Q psy17902 368 TSVACLHNSDL-VASGSY----DGCVKLWKIT--PKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGT 429 (454)
Q Consensus 368 ~~~~~s~~~~~-l~~~~~----dg~v~iwd~~--~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~ 429 (454)
..+.. ++++. +++++. .+...||.+. .+.....+... .....+..+.|||++++++...+.
T Consensus 367 ~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~ 436 (740)
T 4a5s_A 367 IGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSG 436 (740)
T ss_dssp EEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECS
T ss_pred EEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCC
Confidence 54432 44554 444443 2445555543 33322233321 123568899999999988776544
No 182
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.77 E-value=6.2e-16 Score=139.94 Aligned_cols=264 Identities=7% Similarity=-0.069 Sum_probs=178.3
Q ss_pred CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEc
Q psy17902 162 KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAIS 240 (454)
Q Consensus 162 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~ 240 (454)
.++.|.+||..+++....+...............+++. +++++++...++.|.+||. +++.+.++. .......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEe
Confidence 37899999999887765442110011122346778775 4556666666799999999 566667774 44678899998
Q ss_pred CCCCEEEEEe-CCCcEEEEeCCCceeEEEeeccC-----CceeEEEeecCCCEEEEee-CCCcEEEeeccCCeEE-EEcc
Q psy17902 241 FECDTLYSSS-NDRSIKVWNIEDRAYVETLFGHQ-----SAITSLDILAKNRVISSGG-TDKSVRVWKIQEESQL-VFNG 312 (454)
Q Consensus 241 ~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~-~~~~ 312 (454)
+++ .++++. .++.|.+||+.+++....+.... .....+++ .++.++++.. .++.|.+||+.+++.. .+..
T Consensus 93 ~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 93 SDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp ETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 888 455555 78999999999998877665332 14567777 3444444433 4889999999998876 3322
Q ss_pred ccCCeEEEEecCCCEEEEEeCC----------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe
Q psy17902 313 HSRGIDMTRRVNDQQFITCGED----------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG 382 (454)
Q Consensus 313 ~~~~i~~~~~~~~~~l~~~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 382 (454)
...+......+++.+++++..+ +.|.+||..+++....+....+ .....++|+|++++|+++
T Consensus 171 g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g--------~~p~~la~~~d~~~lyv~ 242 (328)
T 3dsm_A 171 GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG--------DWPSEVQLNGTRDTLYWI 242 (328)
T ss_dssp SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT--------CCCEEEEECTTSCEEEEE
T ss_pred CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC--------CCceeEEEecCCCEEEEE
Confidence 2222233333445544444443 7899999998887766654322 127899999999988887
Q ss_pred cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe----cCCCceeeeeee
Q psy17902 383 SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI----GTEHRFGRWKTI 439 (454)
Q Consensus 383 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~----~~d~~i~~W~~~ 439 (454)
.. .|.+||..+++................++++|++..|+++. ..++.|.+|+..
T Consensus 243 ~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 243 NN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp SS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred cc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 65 89999998876532111101135688999999777777775 568899999876
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.76 E-value=4.4e-17 Score=151.82 Aligned_cols=238 Identities=11% Similarity=-0.034 Sum_probs=158.9
Q ss_pred ceEEEEEeCCCcEEEEecCC---CcEEEEeCCCccEEeecccCCCe-EEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE
Q psy17902 192 PILALAVANNNELVASGDNN---SNIKLWSSSLEHLHTFTGHKAPI-TGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE 267 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 267 (454)
.+..++|+|+|++|+.+... ..|.+|++.+.....+..+...+ ..+.|+|+++.|+.++.++.|++||+.+++...
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 36678899999998877543 46888898655555554444333 347899999999999999999999999887655
Q ss_pred EeeccCCceeE-------------------EEeecCCCEEEEe-----eCCCcEEEeeccCCeEEEEccccCCeEEEEec
Q psy17902 268 TLFGHQSAITS-------------------LDILAKNRVISSG-----GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV 323 (454)
Q Consensus 268 ~~~~~~~~v~~-------------------~~~~~~~~~l~~~-----~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~ 323 (454)
....+...... +.|+|+++.++.+ ..+..|++||+.++....+..+...+....+.
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 55444432222 3456777766543 35668999999988776555566666666665
Q ss_pred C--CCEEEEEeCC------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEE
Q psy17902 324 N--DQQFITCGED------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKL 390 (454)
Q Consensus 324 ~--~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~i 390 (454)
+ +..|+..+.+ ..|.+||+..+....... .. ....+..++|+|+|++|+.++.+ +.|++
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~-------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 268 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HA-------EGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CC-------TTEEEEEEEECTTSSCEEEEEEETTTCCEEEEE
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cC-------CCccccceEECCCCCEEEEEecCCCCccceEEE
Confidence 4 5556665543 468888886543222111 00 01237889999999977766543 44999
Q ss_pred EEcCCCceeeEeccCCCceeeeEEEEcC-CCCEEEEEec---------------CCCceeeeeeeCCC
Q psy17902 391 WKITPKRTLEFLQDIPLSGVINSLVFTS-DHKHLVAGIG---------------TEHRFGRWKTIKGV 442 (454)
Q Consensus 391 wd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~~~l~~~~~---------------~d~~i~~W~~~~~~ 442 (454)
||+.++........ + + .. +.|+| ||++|+++.+ .+..|.+|+...+.
T Consensus 269 ~d~~~g~~~~l~~~-~--~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 269 ANPETLENEEVMVM-P--P-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp ECTTTCCEEEEEEC-C--S-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred EECCCCCeEEeeeC-C--C-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 99988765433221 1 1 22 89999 9998887532 34678889876554
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.76 E-value=8.4e-15 Score=141.10 Aligned_cols=281 Identities=11% Similarity=0.066 Sum_probs=195.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcC--CCceecccCCcccCCCCCCceEEEEEe----CCCcEEEEecC-CCcEEE
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLE--TRSKVCSSPFVKTDRKSYPPILALAVA----NNNELVASGDN-NSNIKL 216 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-dg~v~v 216 (454)
.+.++.|+|+|++|++++.++.|.+||+. +.+.+..+.. ......++|+ |+|+++++++. ++.|.|
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-------G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~V 270 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-------GSEARSIETSKMEGWEDKYAIAGAYWPPQYVI 270 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC-------CSEEEEEEECCSTTCTTTEEEEEEEETTEEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec-------CCCCceeEEccccCCCCCEEEEEEccCCeEEE
Confidence 46789999999999999999999999995 6666655542 2246789999 69998888765 589999
Q ss_pred EeC-CCccEEeecc----------cCC-CeEEEEEcCCCCEEE-EEeCCCcEEEEeCCCceeE--EEeeccCCceeEEEe
Q psy17902 217 WSS-SLEHLHTFTG----------HKA-PITGLAISFECDTLY-SSSNDRSIKVWNIEDRAYV--ETLFGHQSAITSLDI 281 (454)
Q Consensus 217 w~~-~~~~~~~~~~----------~~~-~v~~~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~--~~~~~~~~~v~~~~~ 281 (454)
+|. +.+.+..+.. |.. .+..+..++++..++ .....|.|.++|..+...+ ..+ .......++.|
T Consensus 271 iD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~ 349 (567)
T 1qks_A 271 MDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGL 349 (567)
T ss_dssp EETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEE
T ss_pred EECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceE
Confidence 998 6666665532 222 678888888766544 4456799999998765432 222 23445678999
Q ss_pred ecCCCEEEEee-CCCcEEEeeccCCeEEE-Ecc-----ccCCeEEEEecCCCEEE-EEe-CCCCEEEEecCC-------C
Q psy17902 282 LAKNRVISSGG-TDKSVRVWKIQEESQLV-FNG-----HSRGIDMTRRVNDQQFI-TCG-EDGTLSLWSILK-------K 345 (454)
Q Consensus 282 ~~~~~~l~~~~-~dg~i~i~d~~~~~~~~-~~~-----~~~~i~~~~~~~~~~l~-~~~-~dg~i~iwd~~~-------~ 345 (454)
+|++++|++++ .++.|.++|+.+++... ... |.+.-.....+++..++ ++. .++.|.++|..+ .
T Consensus 350 ~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~ 429 (567)
T 1qks_A 350 DGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW 429 (567)
T ss_dssp CTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence 99999876655 57899999999988762 221 22212223344445444 443 568999999987 5
Q ss_pred ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-------CCcEEEEEcCCC-----c-eeeEec-----cCC-
Q psy17902 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-------DGCVKLWKITPK-----R-TLEFLQ-----DIP- 406 (454)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-------dg~v~iwd~~~~-----~-~~~~~~-----~~~- 406 (454)
+.+.++...... -..+..+|++++|.+... .++|.+||+.+. . .+..+. .++
T Consensus 430 kvv~~i~~~g~g---------~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~ 500 (567)
T 1qks_A 430 KILDSFPALGGG---------SLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITE 500 (567)
T ss_dssp SEEEEEECSCSC---------CCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCS
T ss_pred EEEEEEecCCCC---------CEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCC
Confidence 566666543211 234678999998888663 358999999866 2 112332 111
Q ss_pred CceeeeEEEEcCCCCEEEEEec----CCCceeeeeeeCC
Q psy17902 407 LSGVINSLVFTSDHKHLVAGIG----TEHRFGRWKTIKG 441 (454)
Q Consensus 407 ~~~~v~~l~~s~d~~~l~~~~~----~d~~i~~W~~~~~ 441 (454)
....+..+.|+|+|+++.++.. .++.|.++|..+.
T Consensus 501 ~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 501 GQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 2356889999999999988743 3788999887654
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=7.3e-16 Score=135.54 Aligned_cols=238 Identities=11% Similarity=0.023 Sum_probs=166.1
Q ss_pred CeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc
Q psy17902 144 SITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE 222 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~ 222 (454)
...++++++++++++ +.+.++.|.+|+..+........ .....+.+++++++++++++.. ++.|.+|+..+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~ 97 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPF------NGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN 97 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCC------CSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEee------CCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc
Confidence 688999999998776 44678899999876544322111 2334678899999999666666 889999999665
Q ss_pred cEEeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902 223 HLHTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301 (454)
Q Consensus 223 ~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 301 (454)
....+.. ....+.+++++++++++++...++.|.+|+..+.............+.+++++++++++++...++.|.+||
T Consensus 98 ~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 98 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp CCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 5554432 336789999999998777777788999998766544332223334678899999999777777788999999
Q ss_pred ccCCeEEEEc-cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE
Q psy17902 302 IQEESQLVFN-GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV 379 (454)
Q Consensus 302 ~~~~~~~~~~-~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 379 (454)
.......... ........+.+. ++..+++...++.|.+|+........ .... +...+.+++++++|+++
T Consensus 178 ~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~--------~~~~p~~i~~~~~g~l~ 248 (270)
T 1rwi_B 178 AESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFT--------GLNTPLAVAVDSDRTVY 248 (270)
T ss_dssp TTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCC--------SCSCEEEEEECTTCCEE
T ss_pred cCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccC--------CCCCceeEEECCCCCEE
Confidence 9876655322 222344555554 45555555578899999986543322 1111 12348999999999988
Q ss_pred EEecCCCcEEEEEcCCCc
Q psy17902 380 ASGSYDGCVKLWKITPKR 397 (454)
Q Consensus 380 ~~~~~dg~v~iwd~~~~~ 397 (454)
++...++.|++|++...+
T Consensus 249 v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 249 VADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEGGGTEEEEECCCGGG
T ss_pred EEECCCCEEEEEcCCCcc
Confidence 888899999999987543
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=8e-16 Score=137.30 Aligned_cols=222 Identities=9% Similarity=0.003 Sum_probs=159.3
Q ss_pred CCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE
Q psy17902 189 SYPPILALAVANNNE-LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE 267 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 267 (454)
+.....+++|+|+++ +++++..++.|..|+..+. ...+..+...+.+++++++++++++...++.|.+||..+++...
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~ 104 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES 104 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE
Confidence 344678899999998 7888888999999999666 77777788889999999999987777667899999998777543
Q ss_pred Eeecc----CCceeEEEeecCCCEEEE----ee-------------CCCcEEEeeccCCeEEEEccccCCeEEEEe-cCC
Q psy17902 268 TLFGH----QSAITSLDILAKNRVISS----GG-------------TDKSVRVWKIQEESQLVFNGHSRGIDMTRR-VND 325 (454)
Q Consensus 268 ~~~~~----~~~v~~~~~~~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~-~~~ 325 (454)
..... ...+..++++|+|+++++ |+ ..+.|..++.. +....+..+......+.+ +++
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTS
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCC
Confidence 32211 234678999999998887 33 13456666655 444444444444455555 456
Q ss_pred CEEEEEeCCCCEEEEecC-CCcc---ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902 326 QQFITCGEDGTLSLWSIL-KKVP---THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF 401 (454)
Q Consensus 326 ~~l~~~~~dg~i~iwd~~-~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 401 (454)
..+++.+.++.|.+|++. .+.. ...+ .. +...+..++++++|+++++. ++.|.+|+.. ++.+..
T Consensus 184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~--------~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~ 251 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCLNARGETEYQGVHF-TV--------EPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR 251 (296)
T ss_dssp CEEEEETTTTEEEEEEECSSSCEEEEEEEE-CC--------SSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE
T ss_pred CEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC--------CCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE
Confidence 677666778999999997 4433 1222 11 12236679999999976666 7889999986 677777
Q ss_pred eccCCCceeeeEEEE-cCCCCEEEEEe
Q psy17902 402 LQDIPLSGVINSLVF-TSDHKHLVAGI 427 (454)
Q Consensus 402 ~~~~~~~~~v~~l~~-s~d~~~l~~~~ 427 (454)
+.. +.. +++++| +|+++.|++++
T Consensus 252 ~~~--~~~-~~~~~f~~~d~~~L~v~t 275 (296)
T 3e5z_A 252 VLT--PQT-TSNLCFGGPEGRTLYMTV 275 (296)
T ss_dssp EEC--SSC-CCEEEEESTTSCEEEEEE
T ss_pred EEC--CCC-ceeEEEECCCCCEEEEEc
Confidence 664 444 899999 68999998883
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=3.5e-16 Score=157.00 Aligned_cols=240 Identities=8% Similarity=0.019 Sum_probs=166.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc--
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDG-----IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN-- 213 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-- 213 (454)
|...+..++|||||++||.+..++ .|++||+.+++...... ....+..++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~-------~~~~~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL-------ERVKFSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE-------EEECSCCEEECTTSSEEEEEECCCCSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc-------cCcccceEEEEeCCCEEEEEEECCccc
Confidence 445688999999999999876543 89999999887654321 1113567999999999999887765
Q ss_pred --------------EEEEeCCCcc---EEe--ecccCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEeCCC------c
Q psy17902 214 --------------IKLWSSSLEH---LHT--FTGHKAPITGLAISFECDTLYSSSN-----DRSIKVWNIED------R 263 (454)
Q Consensus 214 --------------v~vw~~~~~~---~~~--~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~------~ 263 (454)
|++|++.+.. ... ...|...+..+.|+|+|++|+.++. +..|++||+.+ +
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred cccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 9999994322 222 2335666889999999999988765 56899999976 4
Q ss_pred e-eEEEeeccCCceeEEEeecCCCEEEEeeCC----CcEEEeeccCCeE---EEEccccC--CeEEEEec-CCCEEEEEe
Q psy17902 264 A-YVETLFGHQSAITSLDILAKNRVISSGGTD----KSVRVWKIQEESQ---LVFNGHSR--GIDMTRRV-NDQQFITCG 332 (454)
Q Consensus 264 ~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~---~~~~~~~~--~i~~~~~~-~~~~l~~~~ 332 (454)
. ....+..+...+.. .|+|+|..|+..+.. +.|.+||+.++.. ..+..+.. .+..+.+. .+.++++..
T Consensus 276 ~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~ 354 (710)
T 2xdw_A 276 ILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYL 354 (710)
T ss_dssp SCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEE
T ss_pred ccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEE
Confidence 3 34556666666654 478888877665543 3699999987641 33333333 45555665 444566666
Q ss_pred CCCC--EEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-c---CCCcEEEEEcCCCc
Q psy17902 333 EDGT--LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-S---YDGCVKLWKITPKR 397 (454)
Q Consensus 333 ~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~---~dg~v~iwd~~~~~ 397 (454)
.++. |.+|++.++..+..+... ...+..+.++|++..|+.. + ..++|++||+.+++
T Consensus 355 ~~g~~~l~~~~~~~g~~~~~l~~~---------~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGALLKIFPLE---------VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp ETTEEEEEEEETTTCCEEEEECCC---------SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ECCEEEEEEEECCCCCEEEecCCC---------CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 7774 566777667666655432 3348889999998755533 2 35789999998776
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.74 E-value=8.6e-16 Score=154.78 Aligned_cols=279 Identities=10% Similarity=0.015 Sum_probs=178.0
Q ss_pred CCCCEEEEEeCCCe---EEEEEc--C---CCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEEEe
Q psy17902 152 SDSKHVYSACKDGI---IIKWLL--E---TRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----SNIKLWS 218 (454)
Q Consensus 152 ~~~~~l~~~~~dg~---i~iwd~--~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vw~ 218 (454)
|+|++++....++. -.+|-. . .+.....+.......++...+..++|||||++||.+..+ ..|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 78888776654432 445543 3 222221111111111233468899999999999887653 3699999
Q ss_pred CCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCc--------------EEEEeCCCcee--EEEee--ccCCceeEEE
Q psy17902 219 SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRS--------------IKVWNIEDRAY--VETLF--GHQSAITSLD 280 (454)
Q Consensus 219 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------------i~iwd~~~~~~--~~~~~--~~~~~v~~~~ 280 (454)
+.+........+...+..++|+|| +.|+.++.++. |++|++.++.. ...+. .+...+.++.
T Consensus 196 l~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 274 (741)
T 1yr2_A 196 VADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS 274 (741)
T ss_dssp TTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE
Confidence 954444333222223457899999 99988887654 89999987652 22222 2334588999
Q ss_pred eecCCCEEEEeeCCC-----cEEEeeccCC--e-EEEEccccCCeEEEEecCCCEEEEEeCC----CCEEEEecCCCc-c
Q psy17902 281 ILAKNRVISSGGTDK-----SVRVWKIQEE--S-QLVFNGHSRGIDMTRRVNDQQFITCGED----GTLSLWSILKKV-P 347 (454)
Q Consensus 281 ~~~~~~~l~~~~~dg-----~i~i~d~~~~--~-~~~~~~~~~~i~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~-~ 347 (454)
|+|+|++|+..+.++ .|++||+.++ . ...+..+........+++++.|+..+.+ +.|.+||+.++. .
T Consensus 275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 354 (741)
T 1yr2_A 275 VSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPR 354 (741)
T ss_dssp ECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCE
T ss_pred ECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccc
Confidence 999999888777544 8999999876 4 4444444444444456788888877753 459999987742 2
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC-CCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT-PKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~-~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
...+... +...+..+.++ ++.++++...|+..+||.+. ++.....+.. +..+.+..++++|++..|+.+
T Consensus 355 ~~~l~~~--------~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~-~~~~~v~~~~~s~d~~~l~~~ 424 (741)
T 1yr2_A 355 FDTVVPE--------SKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSL-PGIGSASGLSGRPGDRHAYLS 424 (741)
T ss_dssp EEEEECC--------CSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBC-SSSCEEEEEECCBTCSCEEEE
T ss_pred cEEEecC--------CCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccC-CCCeEEEEeecCCCCCEEEEE
Confidence 2222211 12236778887 56688888889988887665 4555555543 245778999999999876644
Q ss_pred ec---CCCceeeeeeeCC
Q psy17902 427 IG---TEHRFGRWKTIKG 441 (454)
Q Consensus 427 ~~---~d~~i~~W~~~~~ 441 (454)
.+ ..+.|++|+..++
T Consensus 425 ~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 425 FSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEETTEEEEEEEEETTTT
T ss_pred EcCCCCCCEEEEEECCCC
Confidence 22 3578888887554
No 189
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.74 E-value=3.3e-15 Score=133.33 Aligned_cols=240 Identities=6% Similarity=-0.001 Sum_probs=165.5
Q ss_pred eEeEeccCCCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC
Q psy17902 132 VCTKFNGKPHRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN 210 (454)
Q Consensus 132 ~~~~~~~~~h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 210 (454)
....+.. +.....+++|+|+++ +++++..++.|..|+..++ ...+. .+...+.+++++++|+++++...
T Consensus 19 ~~~~l~~--~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~------~~~~~~~~l~~~~dg~l~v~~~~ 88 (296)
T 3e5z_A 19 EARRLAD--GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEM------HPSHHQNGHCLNKQGHLIACSHG 88 (296)
T ss_dssp CCEEEEC--CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEE------SSCSSEEEEEECTTCCEEEEETT
T ss_pred cEEEEec--CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEE------CCCCCcceeeECCCCcEEEEecC
Confidence 3445555 677789999999998 7888888999999999876 33222 24457899999999998888877
Q ss_pred CCcEEEEeC-CCccEEeecc----cCCCeEEEEEcCCCCEEEEE----e-------------CCCcEEEEeCCCceeEEE
Q psy17902 211 NSNIKLWSS-SLEHLHTFTG----HKAPITGLAISFECDTLYSS----S-------------NDRSIKVWNIEDRAYVET 268 (454)
Q Consensus 211 dg~v~vw~~-~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~----~-------------~dg~i~iwd~~~~~~~~~ 268 (454)
++.|.+|+. ++........ ....+..++++|+|+++++. + ..+.|..++.. +. +..
T Consensus 89 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~ 166 (296)
T 3e5z_A 89 LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSA 166 (296)
T ss_dssp TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEE
T ss_pred CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEE
Confidence 789999999 5543322221 12346789999999988873 2 13456666665 44 334
Q ss_pred eeccCCceeEEEeecCCCEEEEeeCCCcEEEeecc-CCeE---E-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecC
Q psy17902 269 LFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ-EESQ---L-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSIL 343 (454)
Q Consensus 269 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~ 343 (454)
+..+......++|+|+++.+++.+.++.|.+|++. .+.. . .+..+......+.+.++..+++++ ++.|.+|+..
T Consensus 167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~ 245 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD 245 (296)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT
T ss_pred eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC
Confidence 45566778999999999988777788999999997 4443 1 222223333344444433455555 8889999986
Q ss_pred CCccceeeecccCCCCCCCCCCcEEEEEE-ecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 344 KKVPTHTIPVAHGYDSSSSEPNWITSVAC-LHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
++.+..+.... . +++++| +|+++.|++++.++ +..++..+.
T Consensus 246 -g~~~~~~~~~~---------~-~~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 246 -GDELGRVLTPQ---------T-TSNLCFGGPEGRTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp -SCEEEEEECSS---------C-CCEEEEESTTSCEEEEEETTE-EEEEECSCC
T ss_pred -CCEEEEEECCC---------C-ceeEEEECCCCCEEEEEcCCe-EEEEEcccc
Confidence 66666554322 2 778889 58988888888764 555565544
No 190
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.74 E-value=1.7e-16 Score=158.83 Aligned_cols=241 Identities=11% Similarity=0.009 Sum_probs=163.5
Q ss_pred CCCCeEEEEEcCCCCEEEEE-----eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc--
Q psy17902 141 HRASITCIAVTSDSKHVYSA-----CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN-- 213 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~-----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-- 213 (454)
|...+.+++|||||++||.+ +.+..|++||+.++........ .......++|+|||+.|+.++.+..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~------~~~~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI------EGGKYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB------SCCTTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc------CcccccceEEecCCCEEEEEEecCCCC
Confidence 66679999999999999843 3446899999998875411111 1111267899999999999988765
Q ss_pred -----------EEEEeCC-Cc----cEEeecccCCCeEEEEEcCCCCEEEEEeCCC----cEEEEeCCCceeEEEeeccC
Q psy17902 214 -----------IKLWSSS-LE----HLHTFTGHKAPITGLAISFECDTLYSSSNDR----SIKVWNIEDRAYVETLFGHQ 273 (454)
Q Consensus 214 -----------v~vw~~~-~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~ 273 (454)
|++|++. +. .+.....|...+.++.|+|+|++|+.++.++ .|++|+..++.. ..+..+.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~ 271 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGV 271 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECS
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCC
Confidence 9999993 33 2333344667889999999999998887666 788887765543 3444555
Q ss_pred CceeEEEeecCCCEEEEee---CCCcEEEeeccCCeE---E-EEccc-cCCeEEEEecCCCEEEEEeCCCCEEEEecC-C
Q psy17902 274 SAITSLDILAKNRVISSGG---TDKSVRVWKIQEESQ---L-VFNGH-SRGIDMTRRVNDQQFITCGEDGTLSLWSIL-K 344 (454)
Q Consensus 274 ~~v~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~---~-~~~~~-~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~-~ 344 (454)
..+....+ +++.+++++. .++.|.+||+.++.. . .+..+ ...+..+.+.++..+++...++..+||.+. .
T Consensus 272 ~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~ 350 (695)
T 2bkl_A 272 GAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIVGGHLSLEYLKDATSEVRVATLK 350 (695)
T ss_dssp SCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEETTEEEEEEEETTEEEEEEEETT
T ss_pred CceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCC
Confidence 56666666 5666444443 257899999987652 3 33333 334555556666677788889988888664 3
Q ss_pred CccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE----ecCCCcEEEEEcCCCc
Q psy17902 345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS----GSYDGCVKLWKITPKR 397 (454)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~----~~~dg~v~iwd~~~~~ 397 (454)
+.....+... ....+..+.++|++..|+. ....++|++||+.+++
T Consensus 351 g~~~~~l~~~--------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 351 GKPVRTVQLP--------GVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp CCEEEECCCS--------SSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CCeeEEecCC--------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 4434333321 1334778889999986663 3335789999998875
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.73 E-value=3.6e-14 Score=130.16 Aligned_cols=278 Identities=10% Similarity=-0.025 Sum_probs=184.9
Q ss_pred EEcCCCCEEEEEeC--CC---eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCCc
Q psy17902 149 AVTSDSKHVYSACK--DG---IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNSN 213 (454)
Q Consensus 149 ~~s~~~~~l~~~~~--dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~ 213 (454)
...|+++++++... .+ .|.+||..+++.+..++. ...+ .++++|+|++|+++. .++.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~------g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~ 98 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG------GFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDY 98 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC------CCCC--CeEECCCCCEEEEEeccccccccCCCCCe
Confidence 34477777777653 22 889999999887766653 2223 899999999999886 3678
Q ss_pred EEEEeC-CCccEEeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEE-eeccCCceeEEEee
Q psy17902 214 IKLWSS-SLEHLHTFTGH-------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVET-LFGHQSAITSLDIL 282 (454)
Q Consensus 214 v~vw~~-~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~ 282 (454)
|.+||. +.+.+..+... ......+.|+|+|++|+++.. ++.|.++| .+++.+.. +.. .. ++.+.
T Consensus 99 v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~-~~---~~~~~ 173 (373)
T 2mad_H 99 VEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS-PT---CYHIH 173 (373)
T ss_pred EEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC-Cc---eEEEE
Confidence 999999 55555554321 123457899999999999874 47899999 99988777 532 22 24455
Q ss_pred cCC-CEEEEeeCCCcEEEeeccCCeEEEE-c-----cccCCe--EEEEecCCCEEEEEeCCCCEEEEecCCCcc--ceee
Q psy17902 283 AKN-RVISSGGTDKSVRVWKIQEESQLVF-N-----GHSRGI--DMTRRVNDQQFITCGEDGTLSLWSILKKVP--THTI 351 (454)
Q Consensus 283 ~~~-~~l~~~~~dg~i~i~d~~~~~~~~~-~-----~~~~~i--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--~~~~ 351 (454)
|.+ ..+++.+.||.+.++|. +++.... . ....++ .......+..++..+..+.+.+.|+..... +..+
T Consensus 174 ~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 174 PGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPI 252 (373)
T ss_pred eCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeee
Confidence 555 45667778999999999 7666521 1 111111 112233344544445788999999865432 2222
Q ss_pred ecccCC-CCCCCCCCcEEEEEEecCCCEEEEecC----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCC
Q psy17902 352 PVAHGY-DSSSSEPNWITSVACLHNSDLVASGSY----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDH 420 (454)
Q Consensus 352 ~~~~~~-~~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~ 420 (454)
...... ......+.....+.++|+++.|+++.. .+.|.++|+.+++.+..+. ..+...+++|+|||
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~---~g~~p~~i~~s~Dg 329 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS---LGHDVDAISVAQDG 329 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE---CCCCcCeEEECCCC
Confidence 211100 000011233455889999987777543 3579999999998888885 34468899999999
Q ss_pred C-EEEEEecCCCceeeeeeeCCCe
Q psy17902 421 K-HLVAGIGTEHRFGRWKTIKGVK 443 (454)
Q Consensus 421 ~-~l~~~~~~d~~i~~W~~~~~~~ 443 (454)
+ .++++...++.|.+||..+...
T Consensus 330 ~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 330 GPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred CeEEEEEcCCCCeEEEEECCCCCE
Confidence 9 6776633689999999876543
No 192
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.72 E-value=3.7e-15 Score=134.75 Aligned_cols=281 Identities=11% Similarity=0.005 Sum_probs=190.6
Q ss_pred EEEcCCCCEEEEEeC-----CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCC
Q psy17902 148 IAVTSDSKHVYSACK-----DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNS 212 (454)
Q Consensus 148 ~~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg 212 (454)
....|+++.+++... ++.|.++|..+.+.+..++. ...+ . ++++|+|++|++++ .++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v------G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~ 109 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG------GFLP-N-PVVADDGSFIAHASTVFSRIARGERTD 109 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE------CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC------CCCC-c-EEECCCCCEEEEEcccccccccCCCCC
Confidence 345689998888865 68999999999998887763 2223 3 99999999888775 357
Q ss_pred cEEEEeC-CCccEEeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEee
Q psy17902 213 NIKLWSS-SLEHLHTFTGH-------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDIL 282 (454)
Q Consensus 213 ~v~vw~~-~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~ 282 (454)
.|.+||. +.+.+..+... ......+.|+|||++++++.. ++.|.++|+.+++.+.++.... . ...+.
T Consensus 110 ~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P 186 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFP 186 (386)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEE
T ss_pred EEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeec
Confidence 8999999 66666665321 124567899999999998874 6899999999999988885322 1 12232
Q ss_pred cCCCEEEEeeCCCcEEEeeccC-CeEEE-Ecccc----CCe--EEEEecCCCEEEEEeCCCCEEEEecCCCc--cceeee
Q psy17902 283 AKNRVISSGGTDKSVRVWKIQE-ESQLV-FNGHS----RGI--DMTRRVNDQQFITCGEDGTLSLWSILKKV--PTHTIP 352 (454)
Q Consensus 283 ~~~~~l~~~~~dg~i~i~d~~~-~~~~~-~~~~~----~~i--~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~ 352 (454)
...+.+++.+.||.+.+.++.. ++... ..... ..+ ...+...++.++..+.+|.|++.|+.+.. .+..+.
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~ 266 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVE 266 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEE
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeeccee
Confidence 2345667778889988888876 44321 11111 111 11222345555557778999999997654 333332
Q ss_pred cccC-CCCCCCCCCcEEEEEEecCCCEEEEecC----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902 353 VAHG-YDSSSSEPNWITSVACLHNSDLVASGSY----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK 421 (454)
Q Consensus 353 ~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 421 (454)
.... .......+.....++++++++.|++... .+.|.++|+.+++.+..+. ....+.+|+|+||++
T Consensus 267 ~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~---vg~~~~~lavs~D~~ 343 (386)
T 3sjl_D 267 ALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE---MGHEIDSINVSQDEK 343 (386)
T ss_dssp SSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECSSSS
T ss_pred ccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEE---CCCCcceEEECCCCC
Confidence 1000 0000001111345777999987777542 2579999999999998887 456789999999997
Q ss_pred -EEEEEecCCCceeeeeeeCCC
Q psy17902 422 -HLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 422 -~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+|+++.+.++.|.++|..++.
T Consensus 344 ~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 344 PLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp CEEEEEETTTTEEEEEETTTCC
T ss_pred eEEEEEcCCCCeEEEEECCCCc
Confidence 788876779999999987653
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.72 E-value=2.9e-14 Score=137.40 Aligned_cols=274 Identities=8% Similarity=-0.028 Sum_probs=192.3
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC---CCccEEeec
Q psy17902 152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS---SLEHLHTFT 228 (454)
Q Consensus 152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~---~~~~~~~~~ 228 (454)
|.+.++++...++.|.++|..+++.+..+.. ...+..+.|+|+|+++++++.++.|.+||+ +.+.+..+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 4455667777889999999999988877653 225668999999999999999999999999 556666665
Q ss_pred ccCCCeEEEEEc----CCCCEEEEEeC-CCcEEEEeCCCceeEEEeecc-----------CCceeEEEeecCCC-EEEEe
Q psy17902 229 GHKAPITGLAIS----FECDTLYSSSN-DRSIKVWNIEDRAYVETLFGH-----------QSAITSLDILAKNR-VISSG 291 (454)
Q Consensus 229 ~~~~~v~~~~~~----~~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~-~l~~~ 291 (454)
... ....++|+ |+|+++++++. +++|.++|..+.+.+..+... ...+..+..++++. ++++.
T Consensus 238 ~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 238 IGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp CCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred cCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 433 46789999 69998887765 589999999999888766421 12577888888765 45555
Q ss_pred eCCCcEEEeeccCCeEE--EEccccCCeEE-EEecCCCEEEEEe-CCCCEEEEecCCCccceeeec-ccCCCCCCCCCCc
Q psy17902 292 GTDKSVRVWKIQEESQL--VFNGHSRGIDM-TRRVNDQQFITCG-EDGTLSLWSILKKVPTHTIPV-AHGYDSSSSEPNW 366 (454)
Q Consensus 292 ~~dg~i~i~d~~~~~~~--~~~~~~~~i~~-~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~ 366 (454)
...|.|.++|......+ ........... .+.+++.+|+++. .++.|.++|+.+++.+..+.. ... .|+..
T Consensus 317 ~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~-----Phpg~ 391 (567)
T 1qks_A 317 KETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT-----PHPGR 391 (567)
T ss_dssp TTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS-----BCCTT
T ss_pred cCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC-----CCCcc
Confidence 67799999998875433 11112222333 3455677776655 678999999999988777764 221 23321
Q ss_pred EEEEEEecCCC-EEEEec-CCCcEEEEEcCC-------CceeeEeccCCCceeeeEEEEcCCCCEEEEEecC------CC
Q psy17902 367 ITSVACLHNSD-LVASGS-YDGCVKLWKITP-------KRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT------EH 431 (454)
Q Consensus 367 i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~-------~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~------d~ 431 (454)
-..+ ++|++. +++++. .+++|.++|..+ .+.+..+... ...-..+.++|++++|.+.... ..
T Consensus 392 g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~--g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 392 GANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPAL--GGGSLFIKTHPNSQYLYVDATLNPEAEISG 468 (567)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECS--CSCCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred ceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecC--CCCCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence 2222 678744 545553 468999999987 4566666642 2333457899999999987421 35
Q ss_pred ceeeeeeeCC
Q psy17902 432 RFGRWKTIKG 441 (454)
Q Consensus 432 ~i~~W~~~~~ 441 (454)
.|.+++..+.
T Consensus 469 ~v~v~d~~~~ 478 (567)
T 1qks_A 469 SVAVFDIKAM 478 (567)
T ss_dssp CEEEEEGGGC
T ss_pred eEEEEECCcc
Confidence 8889987654
No 194
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.72 E-value=1.9e-14 Score=130.67 Aligned_cols=240 Identities=11% Similarity=0.100 Sum_probs=160.7
Q ss_pred EeEeccCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-
Q psy17902 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN- 211 (454)
Q Consensus 133 ~~~~~~~~h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 211 (454)
...+.+ +...+.+++|+|++++++++..++.|.+||..++....... .+...+.++++++++++++++..+
T Consensus 37 ~~~~~~--~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~------~~~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 37 WLEISK--KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV------SHKANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp EEEEES--SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE------CSSSSEEEEEECTTSCEEEEECTTS
T ss_pred eEEEec--cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee------CCCCCcceEEECCCCcEEEEeCCCC
Confidence 344555 77778999999999988888889999999998776543221 134579999999999988877666
Q ss_pred ---CcEEEEeCCCccEE-eec--ccCCCeEEEEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCceeEE
Q psy17902 212 ---SNIKLWSSSLEHLH-TFT--GHKAPITGLAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSAITSL 279 (454)
Q Consensus 212 ---g~v~vw~~~~~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 279 (454)
+.|.+|+..+..+. .+. .+...+.+++++|+++++++... .+.|..|+..+++... +..+...+.++
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i 187 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGI 187 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEE
T ss_pred CCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccce
Confidence 68999998554443 222 24467899999999987776653 3567777776554433 32334457899
Q ss_pred EeecCCCEE-EEeeCCCcEEEeeccC-CeEE-E--------EccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCcc
Q psy17902 280 DILAKNRVI-SSGGTDKSVRVWKIQE-ESQL-V--------FNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVP 347 (454)
Q Consensus 280 ~~~~~~~~l-~~~~~dg~i~i~d~~~-~~~~-~--------~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~ 347 (454)
+|+|+++.| ++.+.++.|.+|++.+ +... . +.++ .....+.+. ++..+++...++.|.+||. .+..
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~ 265 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYP 265 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCE
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCE
Confidence 999999855 4445678999999964 2211 1 1111 233444444 5566666667789999998 4555
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG 386 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 386 (454)
+..+...... ..+...+.+++|+|++..|++++.++
T Consensus 266 ~~~~~~~~~~---~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 266 IGQILIPGRD---EGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEEECTTGG---GTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EEEEEcCCCc---cccccCcceEEECCCCCEEEEEeCcc
Confidence 5555432110 00112478899999987776665553
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.72 E-value=2.4e-13 Score=121.24 Aligned_cols=275 Identities=9% Similarity=-0.002 Sum_probs=187.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
....+.++++.++|+++++...++.|.+|+.. +.... +.. ......+.++++.+++.++++...++.|..|+..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~----~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEV----PTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EEC----SSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EEC----CCCCCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 55678999999999988877778999999987 44332 111 1233578999999999988877778899999987
Q ss_pred CccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE-eeccCCceeEEEeecCCCEEEEeeCCCcE
Q psy17902 221 LEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET-LFGHQSAITSLDILAKNRVISSGGTDKSV 297 (454)
Q Consensus 221 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 297 (454)
+.. ..+ ......+.++++.+++.++++...++.|..||.. ++.... +......+.++++.+++++.++...++.|
T Consensus 92 g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i 169 (300)
T 2qc5_A 92 GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSI 169 (300)
T ss_dssp SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEE
T ss_pred CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeE
Confidence 443 333 2234678999999999877777668899999987 554422 22345678999999999977766667889
Q ss_pred EEeeccCCeEEEEc--cccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec
Q psy17902 298 RVWKIQEESQLVFN--GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH 374 (454)
Q Consensus 298 ~i~d~~~~~~~~~~--~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~ 374 (454)
..|+. ++....+. ........+... ++..+++....+.|.+|+. ++.... +.... ....+.++++++
T Consensus 170 ~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~-------~~~~~~~i~~d~ 239 (300)
T 2qc5_A 170 GRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPT-------PNARPHAITAGK 239 (300)
T ss_dssp EEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSS-------TTCCEEEEEECS
T ss_pred EEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCC-------CCCCceEEEECC
Confidence 99998 55544332 223344555554 4544555445678999998 443322 22111 123388999999
Q ss_pred CCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 375 NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 375 ~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
+|++.++...++.|..|+. ++... .+........+.+++++++|...++. . . .|..++.
T Consensus 240 ~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~-~-~-~i~~~~p 298 (300)
T 2qc5_A 240 NSEIWFTEWGANQIGRITN-DNTIQ-EYQLQTENAEPHGITFGKDGSVWFAL-K-C-KIGKLNL 298 (300)
T ss_dssp TTCEEEEETTTTEEEEECT-TSCEE-EEECCSTTCCCCCEEECTTSCEEEEC-S-S-EEEEEEE
T ss_pred CCCEEEeccCCCeEEEECC-CCcEE-EEECCccCCccceeEeCCCCCEEEEc-c-C-ceEEeCC
Confidence 9997777777789999998 44333 33221234568899999999866554 3 3 5555543
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.71 E-value=4.9e-15 Score=130.20 Aligned_cols=237 Identities=9% Similarity=-0.012 Sum_probs=160.7
Q ss_pred ceEEEEEeCCCcEEE-EecCCCcEEEEeCCCccEEee-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe
Q psy17902 192 PILALAVANNNELVA-SGDNNSNIKLWSSSLEHLHTF-TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL 269 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 269 (454)
...++++++++++++ +...++.|.+|+..+.....+ ..+...+.+++++++++++++.. ++.|.+||..........
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 678999999999777 546788999999844333332 23335678899999988555555 889999998765543222
Q ss_pred eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc-cccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCcc
Q psy17902 270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN-GHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVP 347 (454)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~ 347 (454)
......+.+++++++++++++...++.|.+|+..+....... ........+. .+++..+++...++.|.+||......
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 223356899999999998887777889999987655443221 1112233344 44566666666778999999876543
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI 427 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 427 (454)
...... ....+..++++++|.++++...++.|.+|+........ +.. .+...+.+++++|+|+.+++.
T Consensus 184 ~~~~~~---------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~-~~~~~p~~i~~~~~g~l~v~~- 251 (270)
T 1rwi_B 184 VVLPFT---------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPF-TGLNTPLAVAVDSDRTVYVAD- 251 (270)
T ss_dssp EECCCS---------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCC-CSCSCEEEEEECTTCCEEEEE-
T ss_pred Eeeccc---------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-ecc-CCCCCceeEEECCCCCEEEEE-
Confidence 322111 11338899999999888888788899999986543322 221 133568899999999855555
Q ss_pred cCCCceeeeeeeCC
Q psy17902 428 GTEHRFGRWKTIKG 441 (454)
Q Consensus 428 ~~d~~i~~W~~~~~ 441 (454)
..+++|.+++....
T Consensus 252 ~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 252 RGNDRVVKLTSLEH 265 (270)
T ss_dssp GGGTEEEEECCCGG
T ss_pred CCCCEEEEEcCCCc
Confidence 78999999987544
No 197
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.71 E-value=1.5e-14 Score=126.95 Aligned_cols=211 Identities=10% Similarity=0.075 Sum_probs=165.4
Q ss_pred CCcEEEEecCCCcEEEEeC-CCccEEeecccC-CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc-CCcee
Q psy17902 201 NNELVASGDNNSNIKLWSS-SLEHLHTFTGHK-APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH-QSAIT 277 (454)
Q Consensus 201 ~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~ 277 (454)
.+++|++++.++.|.+||. +++.+..+..+. ..+.++.++|+|++|+ +.++.|..||. +++.+..+..+ ...+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 4678999999999999999 899998888776 4788999999999888 45788999999 78888888764 35788
Q ss_pred EEEeecCCCEEEEeeC-CCcEEEeeccCCeEE-EEcc-------ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc
Q psy17902 278 SLDILAKNRVISSGGT-DKSVRVWKIQEESQL-VFNG-------HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT 348 (454)
Q Consensus 278 ~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~~-~~~~-------~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 348 (454)
++.+.++|+++++.+. ++.|..+|. .++.+ .+.. +.........++++++++...++.|..||.. ++.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEE
Confidence 9999999999998877 777888876 44544 2221 1111122345678889999899999999998 8888
Q ss_pred eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCC----CceeeeEEEEcCCCCEEE
Q psy17902 349 HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP----LSGVINSLVFTSDHKHLV 424 (454)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~----~~~~v~~l~~s~d~~~l~ 424 (454)
..+.... .+.++.+.++|+++++++.++.|..+|..+++.+..+.... ....+..++..++|..++
T Consensus 159 w~~~~~~----------~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v 228 (276)
T 3no2_A 159 NSVKLSG----------TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYI 228 (276)
T ss_dssp EEEECSS----------CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEE
T ss_pred EEEECCC----------CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEE
Confidence 8886532 14567788999999999988899999999998887775321 123378899999999888
Q ss_pred EE
Q psy17902 425 AG 426 (454)
Q Consensus 425 ~~ 426 (454)
+.
T Consensus 229 ~~ 230 (276)
T 3no2_A 229 CN 230 (276)
T ss_dssp EE
T ss_pred Ee
Confidence 77
No 198
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.70 E-value=3.6e-15 Score=136.23 Aligned_cols=227 Identities=13% Similarity=0.116 Sum_probs=150.9
Q ss_pred CeEEEEEcCCCCEEEEEeCC---C--eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-------
Q psy17902 144 SITCIAVTSDSKHVYSACKD---G--IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN------- 211 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~d---g--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------- 211 (454)
.+.+++|||||++|+.++.+ + .|.+|++.++....... ... +..++|+|+|+.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~-------~~~-~~~~~wspdg~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE-------AKN-IRSLEWNEDSRKLLIVGFKRREDEDF 131 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE-------ESE-EEEEEECTTSSEEEEEEECCCC----
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc-------CCC-ccceeECCCCCEEEEEEccCCCcCCc
Confidence 47889999999999987754 3 47788888765443322 222 8999999999988887632
Q ss_pred --------------------CcEEEEeCCCccE-EeecccCCCeEEEEEcCCCCEEEEEeCCC-------cEEEEeCCCc
Q psy17902 212 --------------------SNIKLWSSSLEHL-HTFTGHKAPITGLAISFECDTLYSSSNDR-------SIKVWNIEDR 263 (454)
Q Consensus 212 --------------------g~v~vw~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-------~i~iwd~~~~ 263 (454)
..|.+|++.+... ..+.. . .+..++|+|++ ++++++.++ ...||.+.++
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~ 208 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDG 208 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETT
T ss_pred EEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCC
Confidence 5788999954444 55544 4 78899999999 777776542 3344443355
Q ss_pred eeEEEeeccCCceeEEEeecCCCEEEEeeCC--------CcEEEeeccCCeEEEE-ccccCCeEE-EEecCCCEEEEEeC
Q psy17902 264 AYVETLFGHQSAITSLDILAKNRVISSGGTD--------KSVRVWKIQEESQLVF-NGHSRGIDM-TRRVNDQQFITCGE 333 (454)
Q Consensus 264 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~-~~~~~~i~~-~~~~~~~~l~~~~~ 333 (454)
+. ..+..+ ..+..+ +|+|+.|+.++.+ ..|.+|| ++....+ ..+...+.. +.+.++ .+++++.
T Consensus 209 ~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~sdg-~~~~~~~ 281 (347)
T 2gop_A 209 KE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKDGK-VYFTLFE 281 (347)
T ss_dssp EE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEETTE-EEEEEEE
T ss_pred ce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEcCc-EEEEEec
Confidence 43 334344 455544 9999988776644 3688888 4444433 344555653 566644 7788889
Q ss_pred CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE-EEEEcCCCceeeEec
Q psy17902 334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV-KLWKITPKRTLEFLQ 403 (454)
Q Consensus 334 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v-~iwd~~~~~~~~~~~ 403 (454)
++.++|| +.++....... +...|.+++|+| .++++++.++.. .+|.+. +. ...+.
T Consensus 282 ~~~~~l~-~~~g~~~~~~~----------~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt 337 (347)
T 2gop_A 282 EGSVNLY-IWDGEIKPIAK----------GRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLT 337 (347)
T ss_dssp TTEEEEE-EESSSEEEEEC----------SSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECC
T ss_pred CCcEEEE-EcCCceEEEec----------CCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEec
Confidence 9999999 87544322221 133489999999 677777777665 788776 43 33344
No 199
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.69 E-value=4.4e-14 Score=127.77 Aligned_cols=251 Identities=8% Similarity=-0.020 Sum_probs=171.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CC
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SL 221 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~ 221 (454)
.....+++.. +.++++...++.|.+||..+++.+..+. .......++++++++++++...++.|.+||. ++
T Consensus 44 ~~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~-------~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 44 DVAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRIT-------GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp SCEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEE-------CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred ccceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcC-------CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 4467787753 4455555667999999999998877663 2346889999999865555547899999999 44
Q ss_pred ccEEeecccC-----CCeEEEEEcCCCCEEEEEe--CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC
Q psy17902 222 EHLHTFTGHK-----APITGLAISFECDTLYSSS--NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD 294 (454)
Q Consensus 222 ~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 294 (454)
.....+.... .....+++ ++..|+++. .++.|.+||+.+++.+..+.. ......+.++|+|++++++..+
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCB
T ss_pred eEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCC
Confidence 4444544322 14556777 345555555 488999999999988877754 3345789999999877776654
Q ss_pred ----------CcEEEeeccCCeEE-EEccc-cCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902 295 ----------KSVRVWKIQEESQL-VFNGH-SRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS 361 (454)
Q Consensus 295 ----------g~i~i~d~~~~~~~-~~~~~-~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 361 (454)
+.|.++|..+++.. .+... ......+.+ ++++.++++.. .|.+||+.+++.........
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~------ 264 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEF------ 264 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCC------
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecC------
Confidence 78999999988766 23221 123344444 45777776654 89999998876532111110
Q ss_pred CCCCcEEEEEEec-CCCEEEEe----cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEc
Q psy17902 362 SEPNWITSVACLH-NSDLVASG----SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT 417 (454)
Q Consensus 362 ~~~~~i~~~~~s~-~~~~l~~~----~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s 417 (454)
.......++++| ++.++++. ..++.|.+||.. ++.+..+.. ......++|-
T Consensus 265 -~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~---G~~P~~~~~~ 320 (328)
T 3dsm_A 265 -RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV---GIIPGAFCWK 320 (328)
T ss_dssp -CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE---EESEEEEEEE
T ss_pred -CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe---ccCcceEEEe
Confidence 123488999999 56666666 578899999998 888877763 3445556653
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.69 E-value=4.1e-14 Score=127.22 Aligned_cols=239 Identities=7% Similarity=-0.003 Sum_probs=161.5
Q ss_pred CceEEEEEeCCCcEEEE-------ecCCCcEEEEeCCCccEEeecc-----cCCCeEEEEEcCC-CCEEEEEeCCCcEEE
Q psy17902 191 PPILALAVANNNELVAS-------GDNNSNIKLWSSSLEHLHTFTG-----HKAPITGLAISFE-CDTLYSSSNDRSIKV 257 (454)
Q Consensus 191 ~~v~~~~~~~~~~~l~~-------~~~dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~~-~~~l~~~~~dg~i~i 257 (454)
....+++|++++.++++ +..++.|.+|+........+.. +...+.+++++++ ++ |+.++..+.|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEEE
Confidence 35678999999988877 5668899999984444444432 5567899999998 65 444554557999
Q ss_pred EeCCCceeEEE-eec----cCCceeEEEeecCCCEEEEeeCC---------------CcEEEeeccCCeEEEEccccCCe
Q psy17902 258 WNIEDRAYVET-LFG----HQSAITSLDILAKNRVISSGGTD---------------KSVRVWKIQEESQLVFNGHSRGI 317 (454)
Q Consensus 258 wd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~i~d~~~~~~~~~~~~~~~i 317 (454)
||.. ++.... ... ....+.+++++++++++++...+ +.|..|+.. +....+..+....
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP 174 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc
Confidence 9998 665433 211 12357899999999888776554 567777766 4444333333333
Q ss_pred EEEEec-----CCCEEEEE-eCCCCEEEEecC-CCccce--eeecccCCCCCCCCC-CcEEEEEEecCCCEEEEecCCCc
Q psy17902 318 DMTRRV-----NDQQFITC-GEDGTLSLWSIL-KKVPTH--TIPVAHGYDSSSSEP-NWITSVACLHNSDLVASGSYDGC 387 (454)
Q Consensus 318 ~~~~~~-----~~~~l~~~-~~dg~i~iwd~~-~~~~~~--~~~~~~~~~~~~~~~-~~i~~~~~s~~~~~l~~~~~dg~ 387 (454)
..+.+. +++.++++ ..++.|.+|++. .+.... .+.... .+. ..+..++++++|+++++...++.
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~------~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIP------GTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECC------CCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred ceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECC------CCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 444444 44355544 567899999976 333211 111100 111 34788999999998888777889
Q ss_pred EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 388 VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
|.+||..+++.+..+.. +...+.+++|+|+|+.|+++...++.|.+|+...
T Consensus 249 i~~~d~~~g~~~~~~~~--~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRC--PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBSCSEEEEC--SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCCcEeEEEeC--CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999887776666654 3467899999999997777757778898888653
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.65 E-value=1.5e-12 Score=115.99 Aligned_cols=235 Identities=7% Similarity=0.010 Sum_probs=164.7
Q ss_pred CCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeec--ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeE
Q psy17902 189 SYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT--GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV 266 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 266 (454)
+...+.++++.++|+++++...++.|.+|+.. ..+..+. .+...+.++++.+++.++++...++.|..||.. +...
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 90 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIK 90 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEE
Confidence 34578999999999988877768899999987 4444332 345679999999999877777668889999986 3321
Q ss_pred -EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEc--cccCCeEEEEec-CCCEEEEEeCCCCEEEEec
Q psy17902 267 -ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN--GHSRGIDMTRRV-NDQQFITCGEDGTLSLWSI 342 (454)
Q Consensus 267 -~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~ 342 (454)
..+......+.++++.+++.++++...++.|.+||. ++....+. .....+..+... ++..+++...++.|.+||.
T Consensus 91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 91 EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 122224557899999999988887777889999998 55444332 223345555555 4555555556788999998
Q ss_pred CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCE
Q psy17902 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKH 422 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~ 422 (454)
++.... +.... ....+..++++++|.++++...++.|.+|+. ++.... +........+.+++++++|..
T Consensus 170 -~g~~~~-~~~~~-------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l 238 (299)
T 2z2n_A 170 -SGDITE-FKIPT-------PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE-FKIPTPNARPHAITAGAGIDL 238 (299)
T ss_dssp -TCCEEE-EECSS-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECSTTCE
T ss_pred -CCcEEE-eeCCC-------CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE-EECCCCCCCceeEEECCCCCE
Confidence 554332 22111 1233889999999998777777889999998 665332 322224467889999999986
Q ss_pred EEEEecCCCceeeeee
Q psy17902 423 LVAGIGTEHRFGRWKT 438 (454)
Q Consensus 423 l~~~~~~d~~i~~W~~ 438 (454)
+++. ..++.|.+|+.
T Consensus 239 ~v~~-~~~~~i~~~d~ 253 (299)
T 2z2n_A 239 WFTE-WGANKIGRLTS 253 (299)
T ss_dssp EEEE-TTTTEEEEEET
T ss_pred EEec-cCCceEEEECC
Confidence 5554 56788988886
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.65 E-value=6.7e-14 Score=126.57 Aligned_cols=256 Identities=8% Similarity=-0.014 Sum_probs=173.0
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCcc-cCCCCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902 147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVK-TDRKSYPPILALAVANNNELVASGDN--NSN 213 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~ 213 (454)
.++++|+|++|+++. .++.|.+||..+.+....+.... ...........++|+|||++|+++.. ++.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 399999999998876 35789999999998877765321 00001124557999999999988864 689
Q ss_pred EEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC-ceeEEEeecc----CCcee-EEEee-cCC
Q psy17902 214 IKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED-RAYVETLFGH----QSAIT-SLDIL-AKN 285 (454)
Q Consensus 214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~----~~~v~-~~~~~-~~~ 285 (454)
|.++|+ +.+.+.++... + . ...+....+.+++.+.||.+.+.++.+ ++.......+ ..++. ...|. ++|
T Consensus 162 VsVID~~t~~vv~tI~v~-g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG 238 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDVP-D-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG 238 (386)
T ss_dssp EEEEETTTTEEEEEEECC-S-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT
T ss_pred EEEEECCCCcEEEEEECC-C-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC
Confidence 999999 66666666432 1 1 223333456777888899999999876 5543221111 12221 24554 566
Q ss_pred CEEEEeeCCCcEEEeeccCCeEE---EEc--c--------ccCCe-EEEEecCCCEEEEEeC----------CCCEEEEe
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQL---VFN--G--------HSRGI-DMTRRVNDQQFITCGE----------DGTLSLWS 341 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~---~~~--~--------~~~~i-~~~~~~~~~~l~~~~~----------dg~i~iwd 341 (454)
++++ .+.+|.|++.|+.+.... .+. . ..... .....+.++.++.... .+.|.++|
T Consensus 239 ~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD 317 (386)
T 3sjl_D 239 RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLD 317 (386)
T ss_dssp EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred cEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEE
Confidence 6555 456899999999766432 111 0 11121 2233456666665532 25799999
Q ss_pred cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCC
Q psy17902 342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSD 419 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d 419 (454)
+.+.+.+..+..... +..|+++++++ +|+++ ..++.|.++|..+++.+..+.. .+..+.|.+++|
T Consensus 318 ~~t~kv~~~i~vg~~----------~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~---~~~p~~l~~s~d 384 (386)
T 3sjl_D 318 AKTGERLAKFEMGHE----------IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ---LGHGPQVITTAD 384 (386)
T ss_dssp TTTCCEEEEEEEEEE----------ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC---CCSSCCEEEECC
T ss_pred CCCCeEEEEEECCCC----------cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC---CCCCceeEECCc
Confidence 999999999987543 78999999997 66664 5589999999999999998875 455667888877
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.65 E-value=3.1e-14 Score=131.17 Aligned_cols=276 Identities=12% Similarity=0.058 Sum_probs=183.6
Q ss_pred CCCCEEEEEeCC-----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCCcEEE
Q psy17902 152 SDSKHVYSACKD-----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNSNIKL 216 (454)
Q Consensus 152 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~v~v 216 (454)
++++.+++.... +.|.++|..+.+.+..++. + ..+ .++++|++++|+++. .++.|.+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~v-----G-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsv 153 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDG-----G-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEV 153 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-----C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEEC-----C-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEE
Confidence 456666665542 6999999999999888774 2 234 799999999888876 3678999
Q ss_pred EeC-CCccEEeeccc-------CCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCC-
Q psy17902 217 WSS-SLEHLHTFTGH-------KAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN- 285 (454)
Q Consensus 217 w~~-~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~- 285 (454)
+|. +.+.+..+.-. ......+.|+|+|++|+++.. ++.|.+.|+.+++.+..+.... . ....|++
T Consensus 154 iD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g-~---~~~~p~g~ 229 (426)
T 3c75_H 154 FDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD-C---YHIFPASP 229 (426)
T ss_dssp ECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E---EEEEEEET
T ss_pred EECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC-c---eeeccCCC
Confidence 999 66666655421 133557899999999999874 5789999999999888775322 1 2333433
Q ss_pred CEEEEeeCCCcEEEeeccCCeEEEE-----ccccCC--eEEEEecCCCEEEEEeCCCCEEEEecCCCccc--eeeecccC
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQLVF-----NGHSRG--IDMTRRVNDQQFITCGEDGTLSLWSILKKVPT--HTIPVAHG 356 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~--i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~ 356 (454)
..+++.+.||.+.+.++.+++.... .....+ +.....+.+..++..+..+.|.+.|+...... ..+.....
T Consensus 230 ~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~ 309 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTE 309 (426)
T ss_dssp TEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCT
T ss_pred cEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccc
Confidence 5556666778777777755444311 111111 12223445666666677889999998654321 11111100
Q ss_pred CC-CCCCCCCcEEEEEEecCCCEEEEecC----------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC-EEE
Q psy17902 357 YD-SSSSEPNWITSVACLHNSDLVASGSY----------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK-HLV 424 (454)
Q Consensus 357 ~~-~~~~~~~~i~~~~~s~~~~~l~~~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~ 424 (454)
.. .....+.....++++|+++.+++... ++.|.++|+.+.+.+..+. .......++|+|||+ +|+
T Consensus 310 ~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~---vg~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 310 AERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIE---LGHEIDSINVSQDAEPLLY 386 (426)
T ss_dssp TTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEE---EEEEECEEEECCSSSCEEE
T ss_pred cccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEE---CCCCcCeEEEccCCCEEEE
Confidence 00 00000111223689999887666542 3579999999999998886 345689999999999 888
Q ss_pred EEecCCCceeeeeeeCCC
Q psy17902 425 AGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 425 ~~~~~d~~i~~W~~~~~~ 442 (454)
++...++.|.++|..+..
T Consensus 387 v~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 387 ALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp EEETTTTEEEEEETTTCC
T ss_pred EEcCCCCeEEEEECCCCC
Confidence 885579999999987654
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=1.4e-14 Score=146.08 Aligned_cols=240 Identities=10% Similarity=0.031 Sum_probs=160.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCc--
Q psy17902 141 HRASITCIAVTSDSKHVYSACKD-----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSN-- 213 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-- 213 (454)
|...+..++|||||++||.++.+ ..|++||+.+++...... +...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-------~~~~~~~~~wspD-~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-------KWVKFSGLAWLGN-DALLYSRFAEPKE 232 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-------EEEESCCCEESTT-SEEEEEECCCC--
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-------CCceeccEEEECC-CEEEEEEecCccc
Confidence 43468899999999999987654 469999999987653211 1112357899999 88888876554
Q ss_pred ------------EEEEeCCCcc---EEee--cccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCc--eeEEEe
Q psy17902 214 ------------IKLWSSSLEH---LHTF--TGHKAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDR--AYVETL 269 (454)
Q Consensus 214 ------------v~vw~~~~~~---~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~--~~~~~~ 269 (454)
|++|++.+.. ...+ ..+...+.++.|+|+|++|+..+.++ .|++||+.++ .....+
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l 312 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTAL 312 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEE
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEe
Confidence 8899983222 2223 33444688999999999988877544 8999999876 314455
Q ss_pred eccCCceeEEEeecCCCEEEEeeCC----CcEEEeeccCC--eEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEec
Q psy17902 270 FGHQSAITSLDILAKNRVISSGGTD----KSVRVWKIQEE--SQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI 342 (454)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~--~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~ 342 (454)
..+...+.... +|+++.|+..+.+ +.|.+||+.++ ... .+..+...+..+.+..+..+++...++..+||.+
T Consensus 313 ~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 313 IPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp ECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEE
T ss_pred cCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence 55555555553 4888887776653 45999999874 333 3344444454555556667778888888777765
Q ss_pred C-CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE-E---ecCCCcEEEEEcCCCc
Q psy17902 343 L-KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA-S---GSYDGCVKLWKITPKR 397 (454)
Q Consensus 343 ~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~---~~~dg~v~iwd~~~~~ 397 (454)
. .+.....+... ....+..+.++|+++.|+ + ....++|++||+.+++
T Consensus 392 ~~~g~~~~~l~~~--------~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 392 DLDGKPAGAVSLP--------GIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp ETTSCEEEECBCS--------SSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred eCCCCceeeccCC--------CCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 4 34444443321 133488899999988555 2 2335789999998775
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=7.3e-13 Score=119.01 Aligned_cols=241 Identities=8% Similarity=0.042 Sum_probs=160.4
Q ss_pred CCCCeEEEEEcCCCCEEEE-------EeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCC
Q psy17902 141 HRASITCIAVTSDSKHVYS-------ACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNS 212 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg 212 (454)
.-....+++|+++++++++ +..++.|.+|+..++....... . ...++...+.+++++++ ++++++.. .+
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~-~~~~~~~~~~~i~~~~~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-P-EVNGYGGIPAGCQCDRDANQLFVADM-RL 92 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-C-EETTEECCEEEEEECSSSSEEEEEET-TT
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-c-ccCCCCCCCceEEEecCCCcEEEEEC-CC
Confidence 4445789999999988877 5778999999987766532211 0 00123356889999999 77555554 44
Q ss_pred cEEEEeCCCccEEee-cc-----cCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEeCCCceeEEEeec
Q psy17902 213 NIKLWSSSLEHLHTF-TG-----HKAPITGLAISFECDTLYSSSND---------------RSIKVWNIEDRAYVETLFG 271 (454)
Q Consensus 213 ~v~vw~~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~l~~~~~d---------------g~i~iwd~~~~~~~~~~~~ 271 (454)
.|.+|+.. ..+..+ .. ....+.+++++++++++++...+ +.|..|+.. ++... +..
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~ 169 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDT 169 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-ecc
Confidence 78899987 444433 21 12458899999999877776554 568888876 54433 223
Q ss_pred cCCceeEEEee----cCCCEEEEe-eCCCcEEEeecc-CCeEE------EEcccc-CCeEEEEe-cCCCEEEEEeCCCCE
Q psy17902 272 HQSAITSLDIL----AKNRVISSG-GTDKSVRVWKIQ-EESQL------VFNGHS-RGIDMTRR-VNDQQFITCGEDGTL 337 (454)
Q Consensus 272 ~~~~v~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~~------~~~~~~-~~i~~~~~-~~~~~l~~~~~dg~i 337 (454)
+......++|+ |+++.|+.+ ..++.|.+|++. .+... .+..+. .....+.+ +++..+++...++.|
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 44456889999 999655444 567899999987 34321 122221 23344444 456666666678899
Q ss_pred EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE-EEecCCCcEEEEEcCCC
Q psy17902 338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV-ASGSYDGCVKLWKITPK 396 (454)
Q Consensus 338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l-~~~~~dg~v~iwd~~~~ 396 (454)
.+||..++..+..+... ...+.+++|+|+++.| ++...++.|..|++...
T Consensus 250 ~~~d~~~g~~~~~~~~~---------~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCP---------FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEECTTCBSCSEEEECS---------SSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCCcEeEEEeCC---------CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 99999877766665432 2338999999999944 55556688999998643
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.61 E-value=3.3e-14 Score=129.11 Aligned_cols=173 Identities=12% Similarity=0.026 Sum_probs=130.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce---------e-EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902 233 PITGLAISFECDTLYSSSNDRSIKVWNIEDRA---------Y-VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI 302 (454)
Q Consensus 233 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 302 (454)
+++.+++++...++++|+.++ +.+|++.... . ......+.. |+.++| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 689999999999999999986 6669875433 1 111224566 999999 88999988 8899999999
Q ss_pred cCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902 303 QEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381 (454)
Q Consensus 303 ~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 381 (454)
++.... ....+...+..+.+... .+++++.||.|.+||+..+...... ..|+|++|||.| ++.
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~-------------~~Vs~v~WSpkG--~~v 177 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA-------------QNVTSFDVTNSQ--LAV 177 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS-EEEEEETTSEEEEEETTTCCEEEEE-------------ESEEEEEECSSE--EEE
T ss_pred hhhhccCccceeecceeeEEecCC-CEEEEECCCCEEEEEccCCcccccc-------------CCceEEEEcCCc--eEE
Confidence 875543 44455556665554444 3888999999999999877654321 129999999999 778
Q ss_pred ecCCCcEEEEEcCCCce--eeEecc-------CCCceeeeEEEEcCCCCEEEEE
Q psy17902 382 GSYDGCVKLWKITPKRT--LEFLQD-------IPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 382 ~~~dg~v~iwd~~~~~~--~~~~~~-------~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
|..||++++|+...+.. ...+.. ..|...|.+++|.+++.+|++-
T Consensus 178 g~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 178 LLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred EEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 99999999999877664 445521 1256889999999999998874
No 207
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.58 E-value=2.6e-12 Score=119.45 Aligned_cols=245 Identities=7% Similarity=0.041 Sum_probs=161.5
Q ss_pred CCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEE
Q psy17902 190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVE 267 (454)
Q Consensus 190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~ 267 (454)
......|+|+++++++++...++.|++||..+..+..+........ ++|+++++.|+++..++ .|.+|+...+....
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 3468899999999988888878999999997655555443333344 99999999999988766 79999987654433
Q ss_pred Ee----eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE-----ccccC--Ce-EEEEecCCCE-EEEEeCC
Q psy17902 268 TL----FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF-----NGHSR--GI-DMTRRVNDQQ-FITCGED 334 (454)
Q Consensus 268 ~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~--~i-~~~~~~~~~~-l~~~~~d 334 (454)
.+ ......+.+++++|++..|+.+..++.|+.||..++....+ .+... +. ...+.+.+.. +++...+
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 33 21456678999999555555577788999999987765543 11111 12 3444443444 4555577
Q ss_pred CCEEEEecCCCccceeeecccCCCCC------CCCCCcEEEEEEecCCCEEEEec-CCCcEEEEEcCCCceeeEeccCC-
Q psy17902 335 GTLSLWSILKKVPTHTIPVAHGYDSS------SSEPNWITSVACLHNSDLVASGS-YDGCVKLWKITPKRTLEFLQDIP- 406 (454)
Q Consensus 335 g~i~iwd~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~- 406 (454)
+.|+.|+.... +..+......... ...-.....++++|+|+++++-+ .++.|+.|++.++..........
T Consensus 289 ~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~ 366 (409)
T 3hrp_A 289 SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDV 366 (409)
T ss_dssp TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTC
T ss_pred CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCC
Confidence 89999987643 2222111100000 00123488999999999888887 88999999987775433222100
Q ss_pred -----------CceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 407 -----------LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 407 -----------~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
.-.....++++|+|..+++- ..+++|+.+..
T Consensus 367 ~g~~~g~~~~~~~~~P~giavd~~g~lyVad-~~n~~Ir~i~~ 408 (409)
T 3hrp_A 367 ASQIDGTPLEATFNYPYDICYDGEGGYWIAE-AWGKAIRKYAV 408 (409)
T ss_dssp BSCCCBSTTTCCBSSEEEEEECSSSEEEEEE-STTCEEEEEEE
T ss_pred CCcCCCChhceEeCCceEEEEcCCCCEEEEE-CCCCeEEEEEe
Confidence 02357899999997655554 67778876653
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.58 E-value=5.3e-12 Score=112.42 Aligned_cols=228 Identities=8% Similarity=0.025 Sum_probs=150.1
Q ss_pred ceEEEEEeCC-CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902 192 PILALAVANN-NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF 270 (454)
Q Consensus 192 ~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 270 (454)
-.-+..|+++ +.++++...++.|..|+..+.....+. ....+.++++++++++++ +. ++.|.+||..+++......
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVSSVALRQSGGYVA-TI-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEEEEEEBTTSSEEE-EE-TTEEEEEETTTTEEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceEEEEECCCCCEEE-EE-CCeEEEEECCCCcEEEEEe
Confidence 4567889985 556667677899999999655554443 457899999999999544 44 5679999998876543222
Q ss_pred c----cCCceeEEEeecCCCEEEEeeCC---------CcEEEeeccC-CeEEEEccccCCeEEEEe-cCCCEE-EEEeCC
Q psy17902 271 G----HQSAITSLDILAKNRVISSGGTD---------KSVRVWKIQE-ESQLVFNGHSRGIDMTRR-VNDQQF-ITCGED 334 (454)
Q Consensus 271 ~----~~~~v~~~~~~~~~~~l~~~~~d---------g~i~i~d~~~-~~~~~~~~~~~~i~~~~~-~~~~~l-~~~~~d 334 (454)
. ....++.++++|+|+++++.... ....+|.+.. +..............+.+ +++..| ++.+.+
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 1 12457889999999977654321 2234444432 233322222223344444 456555 455567
Q ss_pred CCEEEEec--CCCccce--eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCcee
Q psy17902 335 GTLSLWSI--LKKVPTH--TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV 410 (454)
Q Consensus 335 g~i~iwd~--~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 410 (454)
+.|.+|++ .++.... .+..... ....+..++++++|++.++....+.|.+||..+++.+..+.. +...
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~------~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~--p~~~ 242 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEK------EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL--PVDK 242 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCG------GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC--SSSB
T ss_pred CcEEEEeccCCCCcccCcEEEEECCC------CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC--CCCC
Confidence 89999987 3443211 1111000 123378899999999888877788899999988988888775 4457
Q ss_pred eeEEEEc-CCCCEEEEEecCC
Q psy17902 411 INSLVFT-SDHKHLVAGIGTE 430 (454)
Q Consensus 411 v~~l~~s-~d~~~l~~~~~~d 430 (454)
+++++|. |+++.|++++..+
T Consensus 243 ~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 243 TTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEEEEESGGGCEEEEEEBCT
T ss_pred ceEEEEeCCCCCEEEEEcCCc
Confidence 8999998 8999888775543
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.58 E-value=1.2e-11 Score=113.45 Aligned_cols=241 Identities=8% Similarity=-0.052 Sum_probs=160.7
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902 147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVANNNELVASGDN--NSN 213 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~ 213 (454)
.++|+|||++|+++. .++.|.+||..+.+....+... ............++|+|+|++|++++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999999986 3678999999988777665532 000001123458999999999998874 478
Q ss_pred EEEEeCCCccEEee-cccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEee-----ccCCce-eEEEeecCC
Q psy17902 214 IKLWSSSLEHLHTF-TGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLF-----GHQSAI-TSLDILAKN 285 (454)
Q Consensus 214 v~vw~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v-~~~~~~~~~ 285 (454)
|.++| ....+... ..... ++.+.|++ ..+++.+.||.+.++|. +++.+.... ....++ ....+.+++
T Consensus 150 v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence 99999 66554332 22222 24455554 45667778999999999 777653321 111221 234556666
Q ss_pred CEEEEeeCCCcEEEeeccCCeEE---EEcc----------ccCCeE-EEEecCCCEEEEEeC----------CCCEEEEe
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQL---VFNG----------HSRGID-MTRRVNDQQFITCGE----------DGTLSLWS 341 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~---~~~~----------~~~~i~-~~~~~~~~~l~~~~~----------dg~i~iwd 341 (454)
..++..+..+.+.+.|+...... .+.. ...... ....+++..++++.. .+.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 54444457789999999765322 1110 011122 233445566666543 35799999
Q ss_pred cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec-CCCcEEEEEcCCCceeeEe
Q psy17902 342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS-YDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~ 402 (454)
+.+.+.+.+++... ...+++|+|+|+ +++++. .++.|.+||+.+++.+..+
T Consensus 305 ~~t~~vv~~i~~g~----------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 305 GLVGQTSSQISLGH----------DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCEEEEEEECCC----------CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 99999999887543 278899999999 777777 5899999999999888774
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.57 E-value=2.6e-12 Score=119.50 Aligned_cols=242 Identities=12% Similarity=0.044 Sum_probs=160.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC--cEEEEeCC
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS--NIKLWSSS 220 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~v~vw~~~ 220 (454)
.....|+|+++++++++...++.|++||..++........ ..... ++|+++++.|+++..++ .|.+|+..
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-------~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~ 202 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-------FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKA 202 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-------CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGG
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-------CCCCc-eeEecCCCcEEEEecCCCceEEEEEcC
Confidence 4688999999999778777789999999987665433221 12233 89999999998888766 78888873
Q ss_pred -CccEEee----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE----eeccCCce--eEEEeecC-CCEE
Q psy17902 221 -LEHLHTF----TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET----LFGHQSAI--TSLDILAK-NRVI 288 (454)
Q Consensus 221 -~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~v--~~~~~~~~-~~~l 288 (454)
......+ ......+.+++++|++..|+++..++.|+.||..++..... ..++...- ..++|+|+ +.++
T Consensus 203 ~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 203 SGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp GTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 3222333 22456678899999655666677789999999987754322 22222222 38999995 5666
Q ss_pred EEeeCCCcEEEeeccCCeEEEEcccc---------------CCeEEEE-ecCCCEEEEEe-CCCCEEEEecCCCccceee
Q psy17902 289 SSGGTDKSVRVWKIQEESQLVFNGHS---------------RGIDMTR-RVNDQQFITCG-EDGTLSLWSILKKVPTHTI 351 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~~~~~~~---------------~~i~~~~-~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~ 351 (454)
++-..++.|+.|+.... ...+.++. .....+. .+++.++++-+ .++.|+.|++.++......
T Consensus 283 v~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~~ 361 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTVA 361 (409)
T ss_dssp EEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEEE
T ss_pred EEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEEe
Confidence 66667889999998754 33333321 1123344 44566666766 7899999998776533222
Q ss_pred ecc--cCCC---CCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902 352 PVA--HGYD---SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393 (454)
Q Consensus 352 ~~~--~~~~---~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~ 393 (454)
... .+.. .....-.....++++++|.++++-..++.|+.+++
T Consensus 362 g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 362 GQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp ECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 110 0000 00111245899999999988888888889988875
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.54 E-value=4e-12 Score=115.65 Aligned_cols=272 Identities=10% Similarity=0.072 Sum_probs=169.1
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeCCCcEEEEecC-----CCcE
Q psy17902 143 ASITCIAVTSDSKHVYSAC--KDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVANNNELVASGDN-----NSNI 214 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~-----dg~v 214 (454)
..+..++++|+|+++++.. .++.++||.+.++.. ..++.. .....+...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 5689999999999988864 234356666554432 222110 112245668999999999986665543 5789
Q ss_pred EEEeCC-CccEEeecc------cCCCeEEEEEcCCCCEEEEE-e---CCCcEEEEeCCCceeEEEeeccCCcee-EEEee
Q psy17902 215 KLWSSS-LEHLHTFTG------HKAPITGLAISFECDTLYSS-S---NDRSIKVWNIEDRAYVETLFGHQSAIT-SLDIL 282 (454)
Q Consensus 215 ~vw~~~-~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~-~---~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~ 282 (454)
.+||+. ++.+..+.. +...+..+++++++..++.+ . .++.|.+||+.+++....+.+|..... ...+.
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 999994 554555432 22456899999865555444 4 578999999998887766654432111 14455
Q ss_pred cCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeE-EEEecCCCEEEEEeCCC-CEEEEecC---CCc-----cceeee
Q psy17902 283 AKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGID-MTRRVNDQQFITCGEDG-TLSLWSIL---KKV-----PTHTIP 352 (454)
Q Consensus 283 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~~~~l~~~~~dg-~i~iwd~~---~~~-----~~~~~~ 352 (454)
+++..+.+.+.++.+..|.. ... ..+.+++..|+.+...+ .|..++.. .+. ....+.
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~-------------~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 242 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHL-------------GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE 242 (343)
T ss_dssp ETTEECBEECTTSCEECCCC-------------CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE
T ss_pred ECCEEEEeccCCCceeceec-------------ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE
Confidence 67777777778888776642 122 33344566777776655 44444421 110 000010
Q ss_pred cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR 432 (454)
Q Consensus 353 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~ 432 (454)
.. + +......++++++|.++++...++.|.+||..+++...... .+....+++++|.++|.+++++ +..+.
T Consensus 243 ~~-g------~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~-~~~~~~p~~va~~~~g~l~v~~-~~~~~ 313 (343)
T 2qe8_A 243 RY-S------EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVT-DEKLSWTDSFNFGSDGYLYFDC-NQLHH 313 (343)
T ss_dssp EE-E------ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEE-CGGGSCEEEEEECTTSCEEEEE-CCGGG
T ss_pred ec-c------cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEE-CCceecCCeeEECCCCcEEEEe-Ccccc
Confidence 00 0 01125668999999999999999999999985565433332 2234568899999999877777 45566
Q ss_pred eeeee
Q psy17902 433 FGRWK 437 (454)
Q Consensus 433 i~~W~ 437 (454)
+.+|.
T Consensus 314 ~~~f~ 318 (343)
T 2qe8_A 314 SAPLN 318 (343)
T ss_dssp SGGGB
T ss_pred ccccc
Confidence 65554
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.54 E-value=3.1e-12 Score=114.40 Aligned_cols=223 Identities=9% Similarity=0.012 Sum_probs=148.3
Q ss_pred CCCCeEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902 141 HRASITCIAVTSDSK-HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS 219 (454)
Q Consensus 141 h~~~V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~ 219 (454)
+........|+|+++ +++++..++.|..|+.. +.. ..+. .....+..++++++|+++++...++.|.+|+.
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~~~------~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DVLL------DATAFTNGNAVDAQQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EEEE------ESCSCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EEEe------CCCCccceeeECCCCCEEEEECCCCEEEEECC
Confidence 556688999999998 66677778999999884 332 2221 13446889999999997777666688999998
Q ss_pred CCccEEeeccc-----CCCeEEEEEcCCCCEEEE----EeC-------------CCcEEEEeCCCceeEEEeeccCCcee
Q psy17902 220 SLEHLHTFTGH-----KAPITGLAISFECDTLYS----SSN-------------DRSIKVWNIEDRAYVETLFGHQSAIT 277 (454)
Q Consensus 220 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~~v~ 277 (454)
.+. +..+..+ ...+..+++.++|+++++ |.. .+.|..||..+++..... ......
T Consensus 115 ~g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~ 191 (305)
T 3dr2_A 115 DGQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPN 191 (305)
T ss_dssp TSC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEE
T ss_pred CCC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCc
Confidence 644 3332211 134678999999998876 332 256888888766654333 344568
Q ss_pred EEEeecCCCEEEEeeCC------CcEEEeeccCCeEE---EE-ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCcc
Q psy17902 278 SLDILAKNRVISSGGTD------KSVRVWKIQEESQL---VF-NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVP 347 (454)
Q Consensus 278 ~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~---~~-~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~ 347 (454)
.++|+|+++.|+.+... +.|.+|++...... .+ .........+.......|.+++.+| |.+|+. .++.
T Consensus 192 gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~-~g~~ 269 (305)
T 3dr2_A 192 GLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDS-DGQL 269 (305)
T ss_dssp EEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSSE-EEEECT-TSCE
T ss_pred ceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCCc-EEEECC-CCCE
Confidence 89999999977776655 68999998765421 11 1111122223333333355555554 999998 5666
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG 386 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 386 (454)
+..+.... .+.+++|+|+++.|++++.++
T Consensus 270 ~~~~~~~~----------~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 270 LGHIPTPG----------TASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEECSS----------CCCEEEECTTSCEEEEEETTE
T ss_pred EEEEECCC----------ceeEEEEeCCCCEEEEEcCCe
Confidence 66665322 278899999998888877765
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.53 E-value=4.4e-13 Score=121.80 Aligned_cols=178 Identities=11% Similarity=0.110 Sum_probs=136.1
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeC---C---------CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSS---S---------LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~---~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 259 (454)
+++.+++++...++++|+.++ +.+|++ . .+.... ..+.. |+.++| +++.|+++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 689999999999999999875 556986 1 122222 23666 999999 88999998 889999999
Q ss_pred CCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902 260 IEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSL 339 (454)
Q Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i 339 (454)
+.+.........|...+.++.+.+. .+++++.||.|.+||+..+.... +...+++++|++.+ ++.|..||.+++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG-~~vg~~dg~i~~ 186 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ-LAVLLKDRSFQS 186 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE-EEEEETTSCEEE
T ss_pred chhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc-eEEEEcCCcEEE
Confidence 9887766666778888888877654 38888999999999999877653 45678899998877 788999999999
Q ss_pred EecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902 340 WSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381 (454)
Q Consensus 340 wd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 381 (454)
|+...... ..+++..........|...|.++.|.+++.+|++
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 98877664 4555432221111124566999999999998877
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.53 E-value=6.8e-11 Score=105.17 Aligned_cols=234 Identities=7% Similarity=0.043 Sum_probs=162.7
Q ss_pred CCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEee--cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEE
Q psy17902 190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTF--TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVE 267 (454)
Q Consensus 190 ~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 267 (454)
...+.++++.++|++.++...++.|.+|+.. ..+..+ ..+...+.++++.+++.++++...++.|..||.. ++...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE
Confidence 4478899999999988887778999999987 333332 2334678999999999877776667889999988 55432
Q ss_pred -EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEE--ccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecC
Q psy17902 268 -TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVF--NGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSIL 343 (454)
Q Consensus 268 -~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~ 343 (454)
.+......+.++++.++++++++...++.|..|+.. +....+ .........+.. +++..+++...++.|.+|+.
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 222234678999999999888877668899999987 554433 222334455555 44555555555788999998
Q ss_pred CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEE
Q psy17902 344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHL 423 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l 423 (454)
++.... +.... ....+..++++++|.+.++....+.|.+|+. ++..... ........+.+++++++|...
T Consensus 175 ~g~~~~-~~~~~-------~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 175 TGKLEE-YPLPT-------NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEY-DIPTPNARPHAITAGKNSEIW 244 (300)
T ss_dssp TCCEEE-EECSS-------TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECSTTCEE
T ss_pred CCcEEE-eeCCC-------CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEE-ECCCCCCCceEEEECCCCCEE
Confidence 444332 22211 1234889999999988877777788999998 4443332 211234568899999999865
Q ss_pred EEEecCCCceeeeee
Q psy17902 424 VAGIGTEHRFGRWKT 438 (454)
Q Consensus 424 ~~~~~~d~~i~~W~~ 438 (454)
++. ..++.|.+|+.
T Consensus 245 v~~-~~~~~i~~~~~ 258 (300)
T 2qc5_A 245 FTE-WGANQIGRITN 258 (300)
T ss_dssp EEE-TTTTEEEEECT
T ss_pred Eec-cCCCeEEEECC
Confidence 555 56788888886
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.52 E-value=2.9e-11 Score=109.08 Aligned_cols=226 Identities=7% Similarity=-0.096 Sum_probs=147.7
Q ss_pred ceEEEEEeCC-CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902 192 PILALAVANN-NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF 270 (454)
Q Consensus 192 ~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 270 (454)
...+.+|+|+ +.++++...++.|.+|+..+.....+. ....+.+++|+++++++++. .++ |.+||..+++......
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~~g-l~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-DDG-LFLRDTATGVLTLHAE 126 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-TTE-EEEEETTTCCEEEEEC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-CCC-EEEEECCCCcEEEEee
Confidence 3457789997 556666667889999999655554443 35679999999998766654 444 9999998877543221
Q ss_pred c----cCCceeEEEeecCCCEEEEeeC------CCcEEEeeccCCeEEEEccccCCeEEEEec-CCCEEEEE-eCCCCEE
Q psy17902 271 G----HQSAITSLDILAKNRVISSGGT------DKSVRVWKIQEESQLVFNGHSRGIDMTRRV-NDQQFITC-GEDGTLS 338 (454)
Q Consensus 271 ~----~~~~v~~~~~~~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~-~~~~l~~~-~~dg~i~ 338 (454)
. ....++++.++|+|+++++... .+.|..++ ++....+.........+.+. +++.++.+ +.++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 1245889999999987665432 24555555 45444333332334444444 55555444 4678999
Q ss_pred EEecC--CC-ccc--eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeE
Q psy17902 339 LWSIL--KK-VPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINS 413 (454)
Q Consensus 339 iwd~~--~~-~~~--~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~ 413 (454)
+|++. ++ ... ..+.... .....+..++++++|++.++...++.|.+|+. +++.+..+.. ....+++
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~------~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~--~~~~~~~ 275 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDST------GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV--PGKQTTC 275 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECT------TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC--SCSBEEE
T ss_pred EEEcccccCCcccCceEEEECC------CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC--CCCCcEE
Confidence 99986 44 321 1111100 01233788999999998777766788999998 5666666654 3456999
Q ss_pred EEEc-CCCCEEEEEecCCC
Q psy17902 414 LVFT-SDHKHLVAGIGTEH 431 (454)
Q Consensus 414 l~~s-~d~~~l~~~~~~d~ 431 (454)
++|+ |++..|++++..++
T Consensus 276 ~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 276 PAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp EEEESTTSCEEEEEEBCTT
T ss_pred EEEecCCCCEEEEEecCCC
Confidence 9998 99888877755543
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.52 E-value=2.2e-12 Score=128.73 Aligned_cols=240 Identities=11% Similarity=0.105 Sum_probs=156.1
Q ss_pred CCCceEEEEEeCCCcEEEEe-----cCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCc---------
Q psy17902 189 SYPPILALAVANNNELVASG-----DNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRS--------- 254 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~~l~~~-----~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~--------- 254 (454)
+...+..++|||||++||.+ +....|++||+.+........+......++|+ |++.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 44578899999999998854 33357999999444332222121123567899 9999998887743
Q ss_pred ----EEEEeCCCcee----EEEeec-cCCceeEEEeecCCCEEEEeeC----CCcEEEeeccCC--eEEEEccccCCeEE
Q psy17902 255 ----IKVWNIEDRAY----VETLFG-HQSAITSLDILAKNRVISSGGT----DKSVRVWKIQEE--SQLVFNGHSRGIDM 319 (454)
Q Consensus 255 ----i~iwd~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~--~~~~~~~~~~~i~~ 319 (454)
|++|++.+... +..... |...+.++.|+|+|++|+.... ...|+++|+.++ ....+..+......
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 99999987642 322223 4455788999999998754432 358999999776 34455555555544
Q ss_pred EEecCCCEEEEEeC----CCCEEEEecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC-CC--cEEE
Q psy17902 320 TRRVNDQQFITCGE----DGTLSLWSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY-DG--CVKL 390 (454)
Q Consensus 320 ~~~~~~~~l~~~~~----dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-dg--~v~i 390 (454)
.+.++++.|+..+. .+.|.++++.++.. ...+... ...+. .|+++++.|+.... ++ .|++
T Consensus 286 ~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~---------~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 286 LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPE---------RQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC---------CSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecC---------CCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 45666666655443 36789999987654 2333221 11133 88999987776655 43 6889
Q ss_pred EEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC---CCceeeeeeeCCC
Q psy17902 391 WKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT---EHRFGRWKTIKGV 442 (454)
Q Consensus 391 wd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~---d~~i~~W~~~~~~ 442 (454)
|++..+ ....+.. +..+.+..+.++|++..|+.+.+. -+.|..|+...+.
T Consensus 355 ~d~~g~-~~~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 355 FDYEGK-RVREVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp ECTTSC-EEEEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EECCCC-eeEEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 998744 4444432 245567888899999887766332 2678888765543
No 217
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.52 E-value=6.1e-13 Score=120.61 Aligned_cols=255 Identities=7% Similarity=-0.087 Sum_probs=168.8
Q ss_pred eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec----------CCCcEEEEeC-CCccEEeeccc---
Q psy17902 165 IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD----------NNSNIKLWSS-SLEHLHTFTGH--- 230 (454)
Q Consensus 165 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~dg~v~vw~~-~~~~~~~~~~~--- 230 (454)
.|.++|..+++.+..++. +. .+ .++++|++++++++. .++.|.+||+ +.+.+.++...
T Consensus 47 ~vsvID~~t~~v~~~i~v-----G~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~ 118 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLG-----AF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP 118 (368)
T ss_dssp EEEEEETTTTEEEEEEEE-----CT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC
T ss_pred eEEEEECCCCeEEEEEeC-----CC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc
Confidence 888999999999888774 22 34 799999999988886 3688999999 77777776533
Q ss_pred ----CCCeEEEEEcCCCCEEEEEeC--CCcEEE--EeCCCceeEEEeeccCCceeEEEeecCC-CEEEEeeCCCcEEEee
Q psy17902 231 ----KAPITGLAISFECDTLYSSSN--DRSIKV--WNIEDRAYVETLFGHQSAITSLDILAKN-RVISSGGTDKSVRVWK 301 (454)
Q Consensus 231 ----~~~v~~~~~~~~~~~l~~~~~--dg~i~i--wd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d 301 (454)
......++++|||++++++.. +..|.+ +|+.+ +..+.. .+. +.+.|++ ..+++.+.||.+.+.+
T Consensus 119 ~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~---~~~~p~g~~~~~~~~~dg~~~~vd 191 (368)
T 1mda_H 119 RFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC---FHIHPGAAATHYLGSCPASLAASD 191 (368)
T ss_dssp SCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC---CCCEEEETTEEECCCCTTSCEEEE
T ss_pred ccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc---eEEccCCCeEEEEEcCCCCEEEEE
Confidence 123567899999999999875 457888 99877 344432 111 2234554 4455667888888888
Q ss_pred ccC-----CeEEE-----EccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc--cceeeecccCCC-CCCCCCCcEE
Q psy17902 302 IQE-----ESQLV-----FNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV--PTHTIPVAHGYD-SSSSEPNWIT 368 (454)
Q Consensus 302 ~~~-----~~~~~-----~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~~~~~~~~i~ 368 (454)
+.+ ++... +.....+. ..+++..++..+. +.|.+.|+.... .+..+....... .....+....
T Consensus 192 ~~~~~~~~~~v~~~~t~~i~vg~~P~---~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 192 LAAAPAAAGIVGAQCTGAQNCSSQAA---QANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp CCSSCCCCEECCCCSCTTSCBCSCCE---EETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS
T ss_pred CccccccCCeEEEEeeeeeeCCCCcc---ccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcce
Confidence 876 32211 00111222 2666677666667 999999986532 222221110000 0000011112
Q ss_pred EEEEecCCCEEEEecC---------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec-CCCceeeeee
Q psy17902 369 SVACLHNSDLVASGSY---------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG-TEHRFGRWKT 438 (454)
Q Consensus 369 ~~~~s~~~~~l~~~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~-~d~~i~~W~~ 438 (454)
.++++|+++.++++.. ++.+.++|+.+.+.+..+. .......++|+|||++++++.. .++.|.++|.
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~---vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~ 344 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS---NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDA 344 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE---EEEEECEEEECCSSSCEEEEEETTTTEEEEEES
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEE---CCCCcceEEECCCCCEEEEEccCCCCeEEEEEC
Confidence 2689999997776533 2356799999998888776 3457899999999997666657 6999999998
Q ss_pred eCC
Q psy17902 439 IKG 441 (454)
Q Consensus 439 ~~~ 441 (454)
.+.
T Consensus 345 ~t~ 347 (368)
T 1mda_H 345 ASD 347 (368)
T ss_dssp SSC
T ss_pred CCC
Confidence 765
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.52 E-value=4.4e-12 Score=116.88 Aligned_cols=242 Identities=8% Similarity=0.004 Sum_probs=165.4
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCc-ccCCCCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902 147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILALAVANNNELVASGDN--NSN 213 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~ 213 (454)
.++++||+++|+++. .++.|.++|..+.+....+... ............++|+|+|++|+++.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999998886 3678999999999887766532 000001123457899999999999874 578
Q ss_pred EEEEeC-CCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEE----eeccCCce-eEEEeecCCC
Q psy17902 214 IKLWSS-SLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIEDRAYVET----LFGHQSAI-TSLDILAKNR 286 (454)
Q Consensus 214 v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~----~~~~~~~v-~~~~~~~~~~ 286 (454)
|.+.|+ +.+.+..+..-. . ....|++ ..+++.+.||.+.+.++.+++.... +.....++ ..+.+.+++.
T Consensus 202 VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 999999 556666655321 1 2333433 5666777888888888865554422 11111121 2356788887
Q ss_pred EEEEeeCCCcEEEeeccCCeEEEEcc-------------ccCCe-EEEEecCCCEEEEEeC----------CCCEEEEec
Q psy17902 287 VISSGGTDKSVRVWKIQEESQLVFNG-------------HSRGI-DMTRRVNDQQFITCGE----------DGTLSLWSI 342 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~~~~~-------------~~~~i-~~~~~~~~~~l~~~~~----------dg~i~iwd~ 342 (454)
.++..+..+.|.+.|+.......... ..... .....+++.++++... .+.|.++|+
T Consensus 278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 77666778999999997654331110 01111 1344556666555432 357999999
Q ss_pred CCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec-CCCcEEEEEcCCCceeeEe
Q psy17902 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS-YDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~ 402 (454)
.+.+.+.+++.... ...+.|+|+|+ ++++.. .++.|.++|+.+++.+..+
T Consensus 358 ~T~kvv~~I~vg~~----------P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELGHE----------IDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEEEE----------ECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECCCC----------cCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999999986542 78899999999 888887 5899999999999998887
No 219
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=6.7e-11 Score=105.24 Aligned_cols=223 Identities=9% Similarity=0.028 Sum_probs=146.4
Q ss_pred CCCCeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902 141 HRASITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS 219 (454)
Q Consensus 141 h~~~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~ 219 (454)
+..-..+..|+|++ .++++...++.|..||..++... .+. ....+.+++++++|+++++. ++.|.+||.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-------~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~ 80 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-------MDAPVSSVALRQSGGYVATI--GTKFCALNW 80 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-------CSSCEEEEEEBTTSSEEEEE--TTEEEEEET
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-------CCCceEEEEECCCCCEEEEE--CCeEEEEEC
Confidence 44556789999964 55666667899999999876542 121 23478999999999965554 467999998
Q ss_pred CCccEEeecc-----cCCCeEEEEEcCCCCEEEEEeC-----------CCcEEEEeCCCceeEEEeeccCCceeEEEeec
Q psy17902 220 SLEHLHTFTG-----HKAPITGLAISFECDTLYSSSN-----------DRSIKVWNIEDRAYVETLFGHQSAITSLDILA 283 (454)
Q Consensus 220 ~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~ 283 (454)
....+..+.. ....++.++++|+|+++++... .+.|..++.. +... .+..+....+.++|+|
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~-~~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 81 KEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVK-KYFDQVDISNGLDWSL 158 (297)
T ss_dssp TTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEE-EEEEEESBEEEEEECT
T ss_pred CCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEE-EEeeccccccceEEcC
Confidence 5444433322 1235788999999986665432 2344445443 3332 2333445568999999
Q ss_pred CCCEE-EEeeCCCcEEEeec--cCCeEE------EEccccCCeEEEEe-cCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902 284 KNRVI-SSGGTDKSVRVWKI--QEESQL------VFNGHSRGIDMTRR-VNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 284 ~~~~l-~~~~~dg~i~i~d~--~~~~~~------~~~~~~~~i~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 353 (454)
+++.| ++.+.++.|.+|++ .++... .+.........+.. ++++++++....+.|.+||..+++.+..+..
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 99866 45556789999987 344322 11222233344444 4566666666778899999988888887765
Q ss_pred ccCCCCCCCCCCcEEEEEEe-cCCCEEEEecC
Q psy17902 354 AHGYDSSSSEPNWITSVACL-HNSDLVASGSY 384 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s-~~~~~l~~~~~ 384 (454)
.. ..+++++|. |+++.|++++.
T Consensus 239 p~---------~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 239 PV---------DKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SS---------SBEEEEEEESGGGCEEEEEEB
T ss_pred CC---------CCceEEEEeCCCCCEEEEEcC
Confidence 42 239999998 88886655543
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.49 E-value=2.6e-12 Score=128.24 Aligned_cols=238 Identities=9% Similarity=0.028 Sum_probs=155.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-----CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC---
Q psy17902 141 HRASITCIAVTSDSKHVYSAC-----KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS--- 212 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~-----~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--- 212 (454)
|...|..++|||||++||.+. ....|++||+.+++...... .......++|+ |++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~-------~~~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL-------KDVKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE-------EEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc-------CCceeccEEEe-CCCEEEEEEecCccc
Confidence 666789999999999988543 22579999999987543211 11113567899 999998887764
Q ss_pred ----------cEEEEeCCC-c----cEEeecc-cCCCeEEEEEcCCCCEEEEEeC----CCcEEEEeCCCce-eEEEeec
Q psy17902 213 ----------NIKLWSSSL-E----HLHTFTG-HKAPITGLAISFECDTLYSSSN----DRSIKVWNIEDRA-YVETLFG 271 (454)
Q Consensus 213 ----------~v~vw~~~~-~----~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd~~~~~-~~~~~~~ 271 (454)
.|++|++.. . .+..... |...+.++.|+|+|++|+.... .+.|+++|+.++. ....+..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~ 278 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG 278 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC
Confidence 399999832 2 2223333 4556788999999998865442 3589999997763 3445555
Q ss_pred cCCceeEEEeecCCCEE-EEeeCC---CcEEEeeccCCeE---EEEccccCCeEEEEecCCCEEEEEeC-CC--CEEEEe
Q psy17902 272 HQSAITSLDILAKNRVI-SSGGTD---KSVRVWKIQEESQ---LVFNGHSRGIDMTRRVNDQQFITCGE-DG--TLSLWS 341 (454)
Q Consensus 272 ~~~~v~~~~~~~~~~~l-~~~~~d---g~i~i~d~~~~~~---~~~~~~~~~i~~~~~~~~~~l~~~~~-dg--~i~iwd 341 (454)
+....... +++++..| +++..+ +.|..+++.++.. ..+..+...+. .+.+.++.|+.... ++ .|++|+
T Consensus 279 ~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 279 DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL-TVHSGSGYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE-EEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE-EEEEECCEEEEEEEECCeeEEEEEE
Confidence 66555554 55666554 444333 5799999987654 34444544444 55566777766654 44 688898
Q ss_pred cCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC----CcEEEEEcCCCc
Q psy17902 342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD----GCVKLWKITPKR 397 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d----g~v~iwd~~~~~ 397 (454)
+..+ ....+... ....+..+.+++++..|+....+ ++|..||+.+++
T Consensus 357 ~~g~-~~~~l~~p--------~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 357 YEGK-RVREVALP--------GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTSC-EEEEECCS--------SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCCC-eeEEeecC--------CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 8744 33333321 12337778888888865554443 789999987764
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.49 E-value=1.9e-11 Score=109.21 Aligned_cols=222 Identities=11% Similarity=0.020 Sum_probs=147.7
Q ss_pred CCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEE
Q psy17902 190 YPPILALAVANNNE-LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVET 268 (454)
Q Consensus 190 ~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 268 (454)
........|+++++ +++++..++.|..|+..+. ...+..+...+.+++++++|+++++...++.|.+|+.. ++.. .
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~-~ 120 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH-L 120 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE-E
Confidence 33567889999998 6677777899999998544 55566667789999999999866665556789999986 5432 2
Q ss_pred eecc-----CCceeEEEeecCCCEEEE----eeC-------------CCcEEEeeccCCeEEEEccccCCeEEEE-ecCC
Q psy17902 269 LFGH-----QSAITSLDILAKNRVISS----GGT-------------DKSVRVWKIQEESQLVFNGHSRGIDMTR-RVND 325 (454)
Q Consensus 269 ~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~i~~~~-~~~~ 325 (454)
+..+ ...++.++++++|++.++ |.. .+.|+.||..++....+. .......+. .+++
T Consensus 121 ~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg 199 (305)
T 3dr2_A 121 LVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDE 199 (305)
T ss_dssp EECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTS
T ss_pred EEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCC
Confidence 2211 134678999999998886 332 256788887666554333 333333344 4556
Q ss_pred CEEEEEeCC------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCcee
Q psy17902 326 QQFITCGED------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399 (454)
Q Consensus 326 ~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~ 399 (454)
..|+.+... +.|.+|++.... +......... .......++++++|++.+ ++.+| |.+|+. .++.+
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~-----~~~~pdgi~~d~~G~lwv-~~~~g-v~~~~~-~g~~~ 270 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV-----PDGLPDGFCVDRGGWLWS-SSGTG-VCVFDS-DGQLL 270 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC-----SSSCCCSEEECTTSCEEE-CCSSE-EEEECT-TSCEE
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC-----CCCCCCeEEECCCCCEEE-ecCCc-EEEECC-CCCEE
Confidence 667666654 689999987554 2211111100 112245688999999544 44554 999997 46677
Q ss_pred eEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902 400 EFLQDIPLSGVINSLVFTSDHKHLVAGI 427 (454)
Q Consensus 400 ~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 427 (454)
..+.. .. .+.+++|+|+++.|++++
T Consensus 271 ~~~~~--~~-~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 271 GHIPT--PG-TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp EEEEC--SS-CCCEEEECTTSCEEEEEE
T ss_pred EEEEC--CC-ceeEEEEeCCCCEEEEEc
Confidence 66664 22 588999999999888873
No 222
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.45 E-value=1.7e-10 Score=106.44 Aligned_cols=267 Identities=13% Similarity=0.111 Sum_probs=170.4
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCC---CCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecc
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR---KSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTG 229 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~ 229 (454)
+..|++++.++.|..+|..+++............ .....+.+... .++..+++++.++.|..+|. +++.+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVT-VSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEE-EETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCce-EeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 5688888889999999999988876554311100 00122322222 23456777888899999998 6777766654
Q ss_pred cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCce-----eEEEeecCCCEEEEeeCCCcEEEeeccC
Q psy17902 230 HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI-----TSLDILAKNRVISSGGTDKSVRVWKIQE 304 (454)
Q Consensus 230 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 304 (454)
........... +..+++++.++.|..+|..+++.+..+....... ...... +..+++++.++.|..+|..+
T Consensus 132 ~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~t 207 (376)
T 3q7m_A 132 AGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQ 207 (376)
T ss_dssp SSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTT
T ss_pred CCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCC
Confidence 33222222222 4578888899999999999998887765332211 122222 45677788899999999998
Q ss_pred CeEE-EEccccC-C---------eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902 305 ESQL-VFNGHSR-G---------IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL 373 (454)
Q Consensus 305 ~~~~-~~~~~~~-~---------i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 373 (454)
++.. ....... . +.......++.+++++.++.|..+|..+++.+....... ...+..
T Consensus 208 G~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-----------~~~~~~- 275 (376)
T 3q7m_A 208 GQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS-----------VNDFIV- 275 (376)
T ss_dssp CCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC-----------EEEEEE-
T ss_pred CcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC-----------CCCceE-
Confidence 8877 2221110 0 111111236778888899999999999998877665321 344444
Q ss_pred cCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 374 HNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 374 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
++..|++++.+|.|..+|..+++.+-..... ....+.+.... +..|+++ +.+|.|.+++..++.
T Consensus 276 -~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~--~~~l~v~-~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 276 -DGNRIYLVDQNDRVMALTIDGGVTLWTQSDL-LHRLLTSPVLY--NGNLVVG-DSEGYLHWINVEDGR 339 (376)
T ss_dssp -ETTEEEEEETTCCEEEEETTTCCEEEEECTT-TTSCCCCCEEE--TTEEEEE-CTTSEEEEEETTTCC
T ss_pred -ECCEEEEEcCCCeEEEEECCCCcEEEeeccc-CCCcccCCEEE--CCEEEEE-eCCCeEEEEECCCCc
Confidence 3567888888999999999999876555421 11223333332 4567777 678889888876653
No 223
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.43 E-value=2.8e-15 Score=137.69 Aligned_cols=255 Identities=9% Similarity=-0.009 Sum_probs=139.0
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902 153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK 231 (454)
Q Consensus 153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~ 231 (454)
++..|++++.||.|+.||..+++....+.. ..+.+..+..++..+++++.||.|+.||. +++.+..+..+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~ 79 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI 79 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC
Confidence 568999999999999999999998876642 23334445567778888889999999999 666665554332
Q ss_pred CC-eE-EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-
Q psy17902 232 AP-IT-GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL- 308 (454)
Q Consensus 232 ~~-v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~- 308 (454)
.. +. +..+. .+..+++++.++.|+.||..+|+.+..+..+. ...++|++..+++++.++.|+.||..+++..
T Consensus 80 ~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 80 PELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp HHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred ccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 11 10 00111 34578888889999999999999887775443 2345678888999999999999999988765
Q ss_pred EEccccCCeEEEEecC----CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEE----E
Q psy17902 309 VFNGHSRGIDMTRRVN----DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLV----A 380 (454)
Q Consensus 309 ~~~~~~~~i~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l----~ 380 (454)
.+.... ........ ++.+++++.+|.|+.||..+++.+........ .+....++++|... +
T Consensus 155 ~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~p---------v~~~~~~~~dg~~~v~~~~ 223 (369)
T 2hz6_A 155 NATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASP---------VVAFYVWQREGLRKVMHIN 223 (369)
T ss_dssp EEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSC---------EEEEEECTTSSCEEECCEE
T ss_pred eEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCc---------eEEEEEecCCceEecccee
Confidence 322111 01111111 25678889999999999999998877763221 13334455555421 1
Q ss_pred EecCCCcEEEEEcCCCc----eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 381 SGSYDGCVKLWKITPKR----TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 381 ~~~~dg~v~iwd~~~~~----~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
.+ ++.++.+|..+|+ .+-.+.. .+.+.+.. -.+..|+++ +.+|.|+.++..
T Consensus 224 ~~--~~~l~~ld~~tG~~~~~~~W~~~~---~~~~~sp~--~~~g~lyv~-~~~G~l~al~~~ 278 (369)
T 2hz6_A 224 VA--VETLRYLTFMSGEVGRITKWKYPF---PKETEAKS--KLTPTLYVG-KYSTSLYASPSM 278 (369)
T ss_dssp EE--HHHHHHHHHHHHHHHHHHTSCCCC---CCHHHHHH--HSEEEECBE-ECSSCEECCEEE
T ss_pred ec--ccceeeeehhcCCcccceeeeecc---Cccccccc--cccceEEEe-cccCCEEecCcc
Confidence 22 3456666766555 3322221 11111111 123455556 567888777765
No 224
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.42 E-value=3.7e-10 Score=101.83 Aligned_cols=218 Identities=10% Similarity=-0.032 Sum_probs=140.3
Q ss_pred CeEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc
Q psy17902 144 SITCIAVTSDS-KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE 222 (454)
Q Consensus 144 ~V~~~~~s~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~ 222 (454)
...+.+|+|++ .++++...++.|..|+..++.... +. ....+.+++|+++|+++++. . ..|.+||....
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-------~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g 119 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-------LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATG 119 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-------CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTC
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-------CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCC
Confidence 45788999974 456666678899999998765432 11 22468999999999877765 3 34999998444
Q ss_pred cEEeeccc-----CCCeEEEEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe
Q psy17902 223 HLHTFTGH-----KAPITGLAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 223 ~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 291 (454)
.+..+... ...+.+++++|+|+++++... .+.|..++ +++.. .+..+......++|+|+++.|+.+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEE
Confidence 44333221 235889999999987665432 25566666 45433 232333456889999999866544
Q ss_pred -eCCCcEEEeecc--CC-eE-----E-EEccccCCeEEEEec-CCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCC
Q psy17902 292 -GTDKSVRVWKIQ--EE-SQ-----L-VFNGHSRGIDMTRRV-NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS 360 (454)
Q Consensus 292 -~~dg~i~i~d~~--~~-~~-----~-~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 360 (454)
+.++.|.+|++. ++ .. . .+.........+... ++.++++...++.|.+|+. +++.+..+....
T Consensus 197 ~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~----- 270 (326)
T 2ghs_A 197 DTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPG----- 270 (326)
T ss_dssp ETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSC-----
T ss_pred ECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCC-----
Confidence 457899999986 44 21 1 111122233444444 4555555556788999998 566655554322
Q ss_pred CCCCCcEEEEEEe-cCCCEEEEecC
Q psy17902 361 SSEPNWITSVACL-HNSDLVASGSY 384 (454)
Q Consensus 361 ~~~~~~i~~~~~s-~~~~~l~~~~~ 384 (454)
..+++++|+ ++++.|++++.
T Consensus 271 ----~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 271 ----KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp ----SBEEEEEEESTTSCEEEEEEB
T ss_pred ----CCcEEEEEecCCCCEEEEEec
Confidence 238999998 88876655543
No 225
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.41 E-value=1.5e-11 Score=121.65 Aligned_cols=280 Identities=10% Similarity=0.055 Sum_probs=184.5
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCC----C-CceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS----Y-PPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF 227 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~----~-~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~ 227 (454)
+..|++++.++.|..+|..+++.+............ . .....+++ .+..|++++.++.|..+|. +++.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 467888888899999999999988776542211000 0 00112233 3557888888999999999 78888777
Q ss_pred ccc-C----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCc--------------------
Q psy17902 228 TGH-K----APITG-LAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSA-------------------- 275 (454)
Q Consensus 228 ~~~-~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~-------------------- 275 (454)
..+ . ..+.+ ... .+..+++++. +|.|+.||..+++.+..+......
T Consensus 155 ~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~ 232 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPS 232 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGG
T ss_pred cCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccccc
Confidence 654 1 11211 111 2345565543 689999999999988776532211
Q ss_pred ------------eeEEEeecCCCEEEEeeCCC-------------------cEEEeeccCCeEE-EEcc--c--------
Q psy17902 276 ------------ITSLDILAKNRVISSGGTDK-------------------SVRVWKIQEESQL-VFNG--H-------- 313 (454)
Q Consensus 276 ------------v~~~~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~-~~~~--~-------- 313 (454)
...++++|++.+++.+..++ .|..+|..+++.. .+.. |
T Consensus 233 g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~ 312 (677)
T 1kb0_A 233 GKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTST 312 (677)
T ss_dssp GCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCC
T ss_pred CceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccC
Confidence 13578888888888877664 4999999999887 3332 2
Q ss_pred cCCeEEEEecCC---CEEEEEeCCCCEEEEecCCCccceeeecccCC---------------------------CCCCCC
Q psy17902 314 SRGIDMTRRVND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGY---------------------------DSSSSE 363 (454)
Q Consensus 314 ~~~i~~~~~~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~---------------------------~~~~~~ 363 (454)
..++..-...++ ..++.++.+|.|+++|..+++.+..+...... ....+.
T Consensus 313 ~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~ 392 (677)
T 1kb0_A 313 QPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGA 392 (677)
T ss_dssp SCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCS
T ss_pred CCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccc
Confidence 112222112244 57888999999999999999988776543210 000000
Q ss_pred CCcEEEEEEecCCCEEEEecC-------------------------------------------CCcEEEEEcCCCceee
Q psy17902 364 PNWITSVACLHNSDLVASGSY-------------------------------------------DGCVKLWKITPKRTLE 400 (454)
Q Consensus 364 ~~~i~~~~~s~~~~~l~~~~~-------------------------------------------dg~v~iwd~~~~~~~~ 400 (454)
..| ..++++|++.++++... .|.|..||+.+++.+-
T Consensus 393 ~~w-~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 393 HNW-HPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SCS-SCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred cCC-CCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 111 25788998888777543 2789999999998776
Q ss_pred EeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 401 FLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 401 ~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
.+. +..++.+..++.++..++++ +.|+.+++||..++.
T Consensus 472 ~~~---~~~~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 472 SVE---HVSPWNGGTLTTAGNVVFQG-TADGRLVAYHAATGE 509 (677)
T ss_dssp EEE---ESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred ecC---CCCCCcCcceEeCCCEEEEE-CCCCcEEEEECCCCc
Confidence 665 33445556677788888888 789999999987664
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.41 E-value=9e-11 Score=116.42 Aligned_cols=265 Identities=15% Similarity=0.121 Sum_probs=170.0
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCc-ccCCCCCCceEE-EEEeCCCcEEEEec------CCCcEEEEeC-CCccE
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFV-KTDRKSYPPILA-LAVANNNELVASGD------NNSNIKLWSS-SLEHL 224 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~~~v~~-~~~~~~~~~l~~~~------~dg~v~vw~~-~~~~~ 224 (454)
+..|++++.||.|..+|..+++........ ... ....+.+ ..+ .++. +++++ .+|.|..||. +++.+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~--~~~~~~~sP~v-~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~ 196 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHK--RSYTITGAPRV-VNGK-VVIGNGGAEFGVRGYVTAYDAETGKEA 196 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTT--SCCBCCSCCEE-ETTE-EEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCC--CCccccCCcEE-ECCE-EEEEeCCCccCCCCEEEEEECCCCcEE
Confidence 468888999999999999999987665432 100 0001110 011 1444 44443 3689999998 77777
Q ss_pred Eeeccc-------------------------------CCCeEEEEEcCCCCEEEEEeCCCc-------------------
Q psy17902 225 HTFTGH-------------------------------KAPITGLAISFECDTLYSSSNDRS------------------- 254 (454)
Q Consensus 225 ~~~~~~-------------------------------~~~v~~~~~~~~~~~l~~~~~dg~------------------- 254 (454)
..+... ......++++|+..+++.++.++.
T Consensus 197 W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 197 WRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 665421 011125788888889999988764
Q ss_pred EEEEeCCCceeEEEeec--cC-------CceeEEEeecCCC---EEEEeeCCCcEEEeeccCCeEEE-Ecccc-------
Q psy17902 255 IKVWNIEDRAYVETLFG--HQ-------SAITSLDILAKNR---VISSGGTDKSVRVWKIQEESQLV-FNGHS------- 314 (454)
Q Consensus 255 i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~-~~~~~------- 314 (454)
|..||..+++.+..+.. |. .++.......+|. .++.++.+|.++++|..+++.+. .....
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 99999999998877754 21 1222222333554 78889999999999999998761 10000
Q ss_pred -------------------CC--------------eEEEEecCCCEEEEEeC----------------------------
Q psy17902 315 -------------------RG--------------IDMTRRVNDQQFITCGE---------------------------- 333 (454)
Q Consensus 315 -------------------~~--------------i~~~~~~~~~~l~~~~~---------------------------- 333 (454)
.. -.....+..+.+++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 00 00122233445554421
Q ss_pred -----------------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 334 -----------------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 334 -----------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
+|.|..||+.+++.+..++.... +..-.+...+.++++|+.||.|+.||..+|
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~tagglvf~gt~dg~l~a~D~~tG 506 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTI----------FNGGTLSTAGNLVFEGSADGRVIAYAADTG 506 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSS----------CCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCC----------ccCccceECCCEEEEECCCCcEEEEECCCC
Confidence 37799999999999888765332 222345567889999999999999999999
Q ss_pred ceeeEeccCCCceeeeEEEEcCCCCE-EEEEecCCCce
Q psy17902 397 RTLEFLQDIPLSGVINSLVFTSDHKH-LVAGIGTEHRF 433 (454)
Q Consensus 397 ~~~~~~~~~~~~~~v~~l~~s~d~~~-l~~~~~~d~~i 433 (454)
+.+..+... ......-+.|+.+|+. +++.+|..+.+
T Consensus 507 ~~lw~~~~~-~~~~~~p~ty~~~G~qyv~~~~G~gg~~ 543 (689)
T 1yiq_A 507 EKLWEQPAA-SGVMAAPVTYSVDGEQYVTFMAGWGGAF 543 (689)
T ss_dssp CEEEEEECS-SCCCSCCEEEEETTEEEEEEEECCCTTH
T ss_pred ccceeeeCC-CCcccCceEEEECCEEEEEEEecCCccc
Confidence 998877642 2333345778888875 44444544433
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.41 E-value=6.5e-11 Score=117.40 Aligned_cols=281 Identities=7% Similarity=0.041 Sum_probs=178.9
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCC---C-CCce-EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRK---S-YPPI-LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF 227 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~-~~~v-~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~ 227 (454)
+..|++++.++.|..+|..+++.+..+........ . ...+ ..+++ .+..|++++.|+.|..+|. +++.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 56788888899999999999998877653211000 0 0000 11222 3457888888999999999 78877766
Q ss_pred ccc--CCCeEEEEEcC---CCCEEEEEe------CCCcEEEEeCCCceeEEEeeccC-----------------------
Q psy17902 228 TGH--KAPITGLAISF---ECDTLYSSS------NDRSIKVWNIEDRAYVETLFGHQ----------------------- 273 (454)
Q Consensus 228 ~~~--~~~v~~~~~~~---~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~----------------------- 273 (454)
... ......+..+| ++ .+++++ .+|.|+.||..+++.+..+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 226 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDA 226 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSST
T ss_pred cCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCce
Confidence 542 11111111112 34 455543 36899999999999887764210
Q ss_pred --------CceeEEEeecCCCEEEEeeCCCc-------------------EEEeeccCCeEE-EEcc--cc-------CC
Q psy17902 274 --------SAITSLDILAKNRVISSGGTDKS-------------------VRVWKIQEESQL-VFNG--HS-------RG 316 (454)
Q Consensus 274 --------~~v~~~~~~~~~~~l~~~~~dg~-------------------i~i~d~~~~~~~-~~~~--~~-------~~ 316 (454)
.....++++|+..+++.++.++. |..+|..+++.. .+.. |. ..
T Consensus 227 w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 306 (689)
T 1yiq_A 227 YVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQH 306 (689)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCC
Confidence 01125788888888988887763 999999999887 3332 21 11
Q ss_pred eEEEEe-cCCC---EEEEEeCCCCEEEEecCCCccceeeecccCC----------------------C---------CCC
Q psy17902 317 IDMTRR-VNDQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHGY----------------------D---------SSS 361 (454)
Q Consensus 317 i~~~~~-~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------------------~---------~~~ 361 (454)
...... .++. .++.++.+|.++++|..+++.+......... . ...
T Consensus 307 ~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~ 386 (689)
T 1yiq_A 307 MILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFW 386 (689)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTT
T ss_pred cEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcc
Confidence 111111 1333 6888899999999999999987554332100 0 000
Q ss_pred CCCCcEEEEEEecCCCEEEEecC---------------------------------------------CCcEEEEEcCCC
Q psy17902 362 SEPNWITSVACLHNSDLVASGSY---------------------------------------------DGCVKLWKITPK 396 (454)
Q Consensus 362 ~~~~~i~~~~~s~~~~~l~~~~~---------------------------------------------dg~v~iwd~~~~ 396 (454)
+... -..++|+|+..+|++... +|.|..||+.++
T Consensus 387 Gg~~-w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG 465 (689)
T 1yiq_A 387 GAHD-WQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ 465 (689)
T ss_dssp CSSC-SSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT
T ss_pred cccC-CCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC
Confidence 0001 123788898887776522 378999999999
Q ss_pred ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 397 ~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+.+-.+.. ..++..-.++..+..++++ +.|+.|+.||..++.
T Consensus 466 ~~~W~~~~---~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 466 QAAWEVPY---VTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEE---SSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred CeEeEccC---CCCccCccceECCCEEEEE-CCCCcEEEEECCCCc
Confidence 87766653 2334444566678888888 789999999987764
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.36 E-value=4.1e-13 Score=123.29 Aligned_cols=202 Identities=9% Similarity=0.008 Sum_probs=119.4
Q ss_pred CCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCC-cee-
Q psy17902 201 NNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS-AIT- 277 (454)
Q Consensus 201 ~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-~v~- 277 (454)
++..|++++.||.|+.||. +++.+..+.. +.+.+..+..++..+++++.||.|+.||..+++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 5678999999999999998 7888877765 4555555666777888888999999999998887666543321 111
Q ss_pred EEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG 356 (454)
Q Consensus 278 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 356 (454)
+..+. .+..+++++.++.|+.||..+++.. .+..+. .+ ...+.++.+++++.++.|+.||..+++.+..+....
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-~~--~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-AD--SLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-cc--cccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 11111 3456778888999999999998876 333222 11 122367788899999999999999998877765321
Q ss_pred CCCCCCCCCcEEEEEEecCC---CEEEEecCCCcEEEEEcCCCceeeEeccCCCceee-eEEEEcCCCCE
Q psy17902 357 YDSSSSEPNWITSVACLHNS---DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI-NSLVFTSDHKH 422 (454)
Q Consensus 357 ~~~~~~~~~~i~~~~~s~~~---~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v-~~l~~s~d~~~ 422 (454)
.....++++. ..+++++.||.|+.||..+++.+-.... ..++ ....++++|..
T Consensus 161 ----------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~---~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 161 ----------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY---ASPVVAFYVWQREGLR 217 (369)
T ss_dssp ----------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC---SSCEEEEEECTTSSCE
T ss_pred ----------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecC---CCceEEEEEecCCceE
Confidence 1122233322 4567788899999999999987766552 3343 34566677753
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.36 E-value=2.5e-10 Score=112.96 Aligned_cols=259 Identities=15% Similarity=0.115 Sum_probs=170.5
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEecC------CCcEEEEeC-CCccE
Q psy17902 153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGDN------NSNIKLWSS-SLEHL 224 (454)
Q Consensus 153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~------dg~v~vw~~-~~~~~ 224 (454)
.+..|++++.|+.|..+|..+++....+...... .....+.+ ..+ .++ .+++++. +|.|+.||. +++.+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~~p~v-~~~-~v~v~~~~~~~~~~g~v~a~D~~tG~~~ 203 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQ-KGSLTITGAPRV-FKG-KVIIGNGGAEYGVRGYITAYDAETGERK 203 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTC-CSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCc-CcCcccccCcEE-ECC-EEEEEecccccCCCCEEEEEECCCCcEE
Confidence 3568888999999999999999988766532000 00011111 111 134 4555543 689999998 77777
Q ss_pred EeecccCCC--------------------------------eEEEEEcCCCCEEEEEeCCC-------------------
Q psy17902 225 HTFTGHKAP--------------------------------ITGLAISFECDTLYSSSNDR------------------- 253 (454)
Q Consensus 225 ~~~~~~~~~--------------------------------v~~~~~~~~~~~l~~~~~dg------------------- 253 (454)
..+...... ...+++++++..++.++.++
T Consensus 204 W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 204 WRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 666432211 13578888888999887764
Q ss_pred cEEEEeCCCceeEEEeec--cC-------CceeEEEeecCC---CEEEEeeCCCcEEEeeccCCeEE-EEcccc-C----
Q psy17902 254 SIKVWNIEDRAYVETLFG--HQ-------SAITSLDILAKN---RVISSGGTDKSVRVWKIQEESQL-VFNGHS-R---- 315 (454)
Q Consensus 254 ~i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~-~---- 315 (454)
.|..+|..+++.+..+.. |. .....+....+| ..++.++.+|.|+++|..+++.+ ...... .
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 499999999998877653 21 112223333467 68899999999999999999887 221110 0
Q ss_pred ------Ce-------------------------EEEEecCCCEEEEEeC-------------------------------
Q psy17902 316 ------GI-------------------------DMTRRVNDQQFITCGE------------------------------- 333 (454)
Q Consensus 316 ------~i-------------------------~~~~~~~~~~l~~~~~------------------------------- 333 (454)
.+ .....+...++++...
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 00 1122334556665432
Q ss_pred ------------CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902 334 ------------DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF 401 (454)
Q Consensus 334 ------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 401 (454)
.|.|..||+.+++.+..++.... +....+...+.++++++.||.|++||..+++.+..
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP----------WNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS----------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCCCC----------CcCcceEeCCCEEEEECCCCcEEEEECCCCceeee
Confidence 27799999999998888764321 33344667788899999999999999999999988
Q ss_pred eccCCCceeeeEEEEcCCCCEEEE
Q psy17902 402 LQDIPLSGVINSLVFTSDHKHLVA 425 (454)
Q Consensus 402 ~~~~~~~~~v~~l~~s~d~~~l~~ 425 (454)
+... ......-+.|.++|+.+++
T Consensus 514 ~~~~-~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 514 APTG-TGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EECS-SCCCSCCEEEEETTEEEEE
T ss_pred eeCC-CCcccCCEEEEeCCEEEEE
Confidence 8742 3333455677788875443
No 230
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.36 E-value=6.4e-11 Score=107.05 Aligned_cols=264 Identities=11% Similarity=0.065 Sum_probs=169.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL 221 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~ 221 (454)
...+.++...+++. |+.++.+ |..+|. ++........ .........+. +..|.+++.++.|..+|..+
T Consensus 59 ~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~------~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~g 126 (330)
T 3hxj_A 59 EIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDT------KKAIVSDFTIF--EDILYVTSMDGHLYAINTDG 126 (330)
T ss_dssp GEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----------CCEEEE--TTEEEEECTTSEEEEECTTS
T ss_pred CCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEEC------CCCcccCceEE--CCEEEEEecCCEEEEEcCCC
Confidence 34456777776664 5555544 888886 4554444332 11112223333 44577788889999999876
Q ss_pred ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee
Q psy17902 222 EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK 301 (454)
Q Consensus 222 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d 301 (454)
........+...+.++...+++. |+.++.++.|..||.. ++.+..+......+.++...+++.+.+ ++ +.|..||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d 201 (330)
T 3hxj_A 127 TEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN 201 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC
T ss_pred CEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC
Confidence 66666655555667777776665 6667788999999998 777766665566677788877777555 44 7899999
Q ss_pred ccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902 302 IQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380 (454)
Q Consensus 302 ~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 380 (454)
.++... .+......+..+....++.+.+++.++.|..++. ++..+..+...... +.++.+.+++ .|.
T Consensus 202 -~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~---------~~~~~~~~~g-~l~ 269 (330)
T 3hxj_A 202 -PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFKTGKRI---------ESSPVIGNTD-TIY 269 (330)
T ss_dssp -TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEECSSCC---------CSCCEECTTS-CEE
T ss_pred -CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEeeCCCCc---------cccceEcCCC-eEE
Confidence 565554 4444444455555555667888888888999974 55555555432211 2334455555 566
Q ss_pred EecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 381 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
+++.+|.|..+|. +++.+..+.. ....+.++...++|...+ + +.+|.+.+....
T Consensus 270 v~t~~ggl~~~d~-~g~~~~~~~~--~~~~~~~~~~d~~g~l~~-g-t~~G~~~~~~~~ 323 (330)
T 3hxj_A 270 FGSYDGHLYAINP-DGTEKWNFET--GSWIIATPVIDENGTIYF-G-TRNGKFYALFNL 323 (330)
T ss_dssp EECTTCEEEEECT-TSCEEEEEEC--SSCCCSCCEECTTCCEEE-E-CTTSCEEEEEC-
T ss_pred EecCCCCEEEECC-CCcEEEEEEc--CCccccceEEcCCCEEEE-E-cCCCeEEEEecc
Confidence 6777888999996 6666655543 345677888888887555 5 578888776543
No 231
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.36 E-value=7.9e-10 Score=101.91 Aligned_cols=256 Identities=10% Similarity=0.053 Sum_probs=164.2
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccC
Q psy17902 153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHK 231 (454)
Q Consensus 153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~ 231 (454)
++..|++++.++.|..+|..+++.......... ....+ ... +..+++++.++.|..+|. +++.+..+....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~--~~~~p----~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~ 173 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE--ALSRP----VVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDM 173 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSC--CCSCC----EEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc--eEcCC----EEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCC
Confidence 456788889999999999999987765543111 01111 122 346778888999999998 677776665432
Q ss_pred CCe-----EEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCc----------e-eEEEeecCCCEEEEeeCCC
Q psy17902 232 API-----TGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSA----------I-TSLDILAKNRVISSGGTDK 295 (454)
Q Consensus 232 ~~v-----~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~----------v-~~~~~~~~~~~l~~~~~dg 295 (454)
... ...... +..+++++.++.|..+|..+++.+......... + ..... .+..++.++.++
T Consensus 174 ~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~v~~~~~~g 249 (376)
T 3q7m_A 174 PSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVV--VNGVVFALAYNG 249 (376)
T ss_dssp -----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEE--ETTEEEEECTTS
T ss_pred CceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEE--ECCEEEEEecCc
Confidence 211 112222 457888888999999999999887665422110 1 11111 246677788899
Q ss_pred cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902 296 SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375 (454)
Q Consensus 296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 375 (454)
.+..+|..+++..-.... ...... ...++.+++++.++.|..+|..+++.+......... .+..... .
T Consensus 250 ~l~~~d~~tG~~~w~~~~-~~~~~~-~~~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~--------~~~~~~~--~ 317 (376)
T 3q7m_A 250 NLTALDLRSGQIMWKREL-GSVNDF-IVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHR--------LLTSPVL--Y 317 (376)
T ss_dssp CEEEEETTTCCEEEEECC-CCEEEE-EEETTEEEEEETTCCEEEEETTTCCEEEEECTTTTS--------CCCCCEE--E
T ss_pred EEEEEECCCCcEEeeccC-CCCCCc-eEECCEEEEEcCCCeEEEEECCCCcEEEeecccCCC--------cccCCEE--E
Confidence 999999999887722221 222222 234778888889999999999999887766522111 0122222 2
Q ss_pred CCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeee-EEEEcCCCCEEEEEecCCCceeeee
Q psy17902 376 SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVIN-SLVFTSDHKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 376 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~l~~s~d~~~l~~~~~~d~~i~~W~ 437 (454)
+..|++++.+|.|.++|..+++.+..... ....+. ..... +..|+++ +.+|.|..|+
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~~~~~--~~~~~~~~~~~~--~~~l~v~-~~~G~l~~~~ 375 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVAQQKV--DSSGFQTEPVAA--DGKLLIQ-AKDGTVYSIT 375 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC--CTTCBCSCCEEE--TTEEEEE-BTTSCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec--CCCcceeCCEEE--CCEEEEE-eCCCEEEEEe
Confidence 45788888999999999999987766653 122222 22222 4567777 6788888876
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.35 E-value=7.1e-11 Score=107.05 Aligned_cols=248 Identities=10% Similarity=-0.000 Sum_probs=161.6
Q ss_pred EEEEcCCCCEEEEEe----------CCCeEEEEEcCCCceecccCCcccCC-CCCCceEEEEEeCCCcEEEEecC--CCc
Q psy17902 147 CIAVTSDSKHVYSAC----------KDGIIIKWLLETRSKVCSSPFVKTDR-KSYPPILALAVANNNELVASGDN--NSN 213 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~----------~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~ 213 (454)
.+.++|++++|+++. .++.|.+||+.+.+....+....... ........++++|||++|+++.. +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 799999999999886 36899999999999888775420000 00123557999999999998875 457
Q ss_pred EEE--EeCCCccEEeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCCC-----ceeEEE----eeccCCceeEEEe
Q psy17902 214 IKL--WSSSLEHLHTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIED-----RAYVET----LFGHQSAITSLDI 281 (454)
Q Consensus 214 v~v--w~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~-----~~~~~~----~~~~~~~v~~~~~ 281 (454)
|.+ +|+.. +..+..- +. +.+.|++ ..+++.+.||.+.+.|+.+ ++.... +.....+. .
T Consensus 149 v~V~~iD~~t--v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~- 218 (368)
T 1mda_H 149 AGLSVPGASD--DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q- 218 (368)
T ss_dssp EEEEETTTEE--EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-
T ss_pred EEEEEEchhh--ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-
Confidence 888 88843 4444321 11 1223444 3455667788888888886 443211 11112333 3
Q ss_pred ecCCCEEEEeeCCCcEEEeeccCCeEEE---Ecc----------ccCCeE-EEEecCCCEEEEEeC---------CCCEE
Q psy17902 282 LAKNRVISSGGTDKSVRVWKIQEESQLV---FNG----------HSRGID-MTRRVNDQQFITCGE---------DGTLS 338 (454)
Q Consensus 282 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~----------~~~~i~-~~~~~~~~~l~~~~~---------dg~i~ 338 (454)
.+++..++..+. +.|.+.|+.+..... +.. ...... ....+++.+++++.. ++.+.
T Consensus 219 ~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 219 ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 566666555666 999999987543211 100 011111 345556676665432 23566
Q ss_pred EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC-EEEEec-CCCcEEEEEcCCCceeeEeccCCCceeeeEEEE
Q psy17902 339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGS-YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF 416 (454)
Q Consensus 339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~ 416 (454)
++|+.+.+.+..++.... ...|+|+|+|+ ++++.. .++.|.++|+.+++.+..+.. ......+++
T Consensus 298 ViD~~t~~vv~~i~vg~~----------p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~v---g~~P~~i~~ 364 (368)
T 1mda_H 298 SVTASVGQTSGPISNGHD----------SDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL---DKGPESLSV 364 (368)
T ss_dssp EEESSSCCEEECCEEEEE----------ECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCC---CSCCCEEEC
T ss_pred EEECCCCeEEEEEECCCC----------cceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEEC---CCCCCEEEe
Confidence 999999999988876542 78899999998 566666 589999999999998888863 344566666
Q ss_pred cC
Q psy17902 417 TS 418 (454)
Q Consensus 417 s~ 418 (454)
.+
T Consensus 365 ~~ 366 (368)
T 1mda_H 365 QN 366 (368)
T ss_dssp CC
T ss_pred ec
Confidence 54
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.35 E-value=5.1e-10 Score=101.89 Aligned_cols=227 Identities=9% Similarity=0.077 Sum_probs=141.0
Q ss_pred CCCcEEEE-ecCCCcEEEEeCC-C----ccEEeec------c-cCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeC
Q psy17902 200 NNNELVAS-GDNNSNIKLWSSS-L----EHLHTFT------G-HKAPITGLAISFECDTLYSSSND------RSIKVWNI 260 (454)
Q Consensus 200 ~~~~~l~~-~~~dg~v~vw~~~-~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~ 260 (454)
.++++|++ |..++.|.|+|+. . +...++. . .......+.++|+| .++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 67776665 5567899999983 2 2333441 1 11244567888999 77766555 78999999
Q ss_pred CCceeEEEeeccCC---ceeEEEeecCCCEEEEee-------------------CCCcEEEeeccCCeEE-EEccc---c
Q psy17902 261 EDRAYVETLFGHQS---AITSLDILAKNRVISSGG-------------------TDKSVRVWKIQEESQL-VFNGH---S 314 (454)
Q Consensus 261 ~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~i~d~~~~~~~-~~~~~---~ 314 (454)
.+++.+..+..... .-..+.|+|+++.+++.. ....|.+||+.+++.. .+... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 99999888863222 234588899999888874 3689999999987665 22221 1
Q ss_pred CCeEEEE--ecCCCEEEEEe------CCCCEEEEecCCCcc--ceeeecccC-CCC-CC-------CCCCcEEEEEEecC
Q psy17902 315 RGIDMTR--RVNDQQFITCG------EDGTLSLWSILKKVP--THTIPVAHG-YDS-SS-------SEPNWITSVACLHN 375 (454)
Q Consensus 315 ~~i~~~~--~~~~~~l~~~~------~dg~i~iwd~~~~~~--~~~~~~~~~-~~~-~~-------~~~~~i~~~~~s~~ 375 (454)
.+....+ .+++.++++++ .+++|.+|....+.. ...+..... ... .. ........|.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 2222222 45566666555 567887776544321 111111110 000 00 00133778999999
Q ss_pred CCEEEEecC-CCcEEEEEcCCC---ceeeEeccC------------CCceeeeEEEEcCCCCEEEEEe
Q psy17902 376 SDLVASGSY-DGCVKLWKITPK---RTLEFLQDI------------PLSGVINSLVFTSDHKHLVAGI 427 (454)
Q Consensus 376 ~~~l~~~~~-dg~v~iwd~~~~---~~~~~~~~~------------~~~~~v~~l~~s~d~~~l~~~~ 427 (454)
|++|.++.. .+.|.+||+... +.+..+... ...+....++++|||++|+++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 998877765 678999998643 344444321 0011368899999999999994
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.33 E-value=6.7e-10 Score=104.78 Aligned_cols=222 Identities=11% Similarity=0.049 Sum_probs=146.5
Q ss_pred CCcEEEEecC-CCcEEEEeC-CCccEEeecc-cCCCeEEEEE-c-CCCCEEEEEeC------------------CCcEEE
Q psy17902 201 NNELVASGDN-NSNIKLWSS-SLEHLHTFTG-HKAPITGLAI-S-FECDTLYSSSN------------------DRSIKV 257 (454)
Q Consensus 201 ~~~~l~~~~~-dg~v~vw~~-~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~~------------------dg~i~i 257 (454)
||++|++... ++.|.+.|+ ..+....+.- ....+..+++ + |++.++++++. ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7888877665 467999999 4455553321 2345788888 5 89999998852 457999
Q ss_pred EeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCC--------------------------------------cEEE
Q psy17902 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDK--------------------------------------SVRV 299 (454)
Q Consensus 258 wd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------------------------------------~i~i 299 (454)
+|..+.+.+..+.--. ....++++|+|+++++++.+. .|.|
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998887775322 456788999999998888553 3555
Q ss_pred eeccC--CeE-E-EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCCc------------cceeeecccCCCCCCC
Q psy17902 300 WKIQE--ESQ-L-VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKKV------------PTHTIPVAHGYDSSSS 362 (454)
Q Consensus 300 ~d~~~--~~~-~-~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~------------~~~~~~~~~~~~~~~~ 362 (454)
.|.++ +.. + .......+..+...+++.++++++ .+.+|.++|+.+.+ ....+...
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-------- 330 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-------- 330 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC--------
T ss_pred EeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC--------
Confidence 56555 322 2 222222333455556677666555 78899999998653 12222221
Q ss_pred CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC----------CceeeEeccCCCce---eeeEEEEcCCCCEEEEEecC
Q psy17902 363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITP----------KRTLEFLQDIPLSG---VINSLVFTSDHKHLVAGIGT 429 (454)
Q Consensus 363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~----------~~~~~~~~~~~~~~---~v~~l~~s~d~~~l~~~~~~ 429 (454)
.....++|+|+|...++.-.|++|.+||+.. ...+..+......+ .-.++.++|||++|+++...
T Consensus 331 --~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~ 408 (595)
T 1fwx_A 331 --LGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKF 408 (595)
T ss_dssp --SCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESC
T ss_pred --CCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCC
Confidence 2278899999995555666799999999987 44555555421111 12334678999999998654
Q ss_pred C-Cce
Q psy17902 430 E-HRF 433 (454)
Q Consensus 430 d-~~i 433 (454)
. .++
T Consensus 409 skdr~ 413 (595)
T 1fwx_A 409 SKDRF 413 (595)
T ss_dssp CTTSS
T ss_pred Ccccc
Confidence 4 444
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.29 E-value=5.5e-11 Score=107.47 Aligned_cols=258 Identities=10% Similarity=0.012 Sum_probs=162.2
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEe
Q psy17902 147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHT 226 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~ 226 (454)
+..+..++ .|++++.++.|..|| .+++....... ....+.++...+++. |.+++.+ |..+|.++..+..
T Consensus 24 ~~~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~------~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~~g~~~~~ 92 (330)
T 3hxj_A 24 SPILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKS------GEIIECRPSIGKDGT-IYFGSDK--VYAINPDGTEKWR 92 (330)
T ss_dssp CCEECTTS-CEECSSTTTTTEEEC-TTSCEEESSCG------GGEEEECCEETTTTE-ECCSSCE--EEEECCCGGGGGG
T ss_pred CceEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEec------CCCcccceEEecCCc-EEEecCc--EEEECCCCcEEEE
Confidence 34444454 566777888899999 77776655442 233456677766765 5555554 8888876655544
Q ss_pred ecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe
Q psy17902 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES 306 (454)
Q Consensus 227 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 306 (454)
+...........+. +..|++++.++.|..+|.. ++....+..+...+.++...+++. |+.++.++.|..||.. +.
T Consensus 93 ~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 93 FDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GT 167 (330)
T ss_dssp SCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SC
T ss_pred EECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CC
Confidence 44333333333343 5678888889999999998 777666655555667777776776 4557778999999998 55
Q ss_pred EE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902 307 QL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD 385 (454)
Q Consensus 307 ~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 385 (454)
.. .+......+..+....++.+++++ +.|..|| .++.......... ..+.++...++|.+ .+++.+
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~---------~~~~~~~~~~~g~l-~v~t~~ 234 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGY---------WTVTRPAISEDGTI-YVTSLD 234 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSS---------CCCSCCEECTTSCE-EEEETT
T ss_pred EeEEEecCCCceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCC---------cceeceEECCCCeE-EEEcCC
Confidence 54 443333344444444445566666 8899999 6766665554321 22677788888754 455667
Q ss_pred CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
+.|..++. ++..+..+.. ....+.++.+.+++.. .++ +.++.|..++.
T Consensus 235 ~gl~~~~~-~g~~~~~~~~--~~~~~~~~~~~~~g~l-~v~-t~~ggl~~~d~ 282 (330)
T 3hxj_A 235 GHLYAINP-DGTEKWRFKT--GKRIESSPVIGNTDTI-YFG-SYDGHLYAINP 282 (330)
T ss_dssp TEEEEECT-TSCEEEEEEC--SSCCCSCCEECTTSCE-EEE-CTTCEEEEECT
T ss_pred CeEEEECC-CCCEeEEeeC--CCCccccceEcCCCeE-EEe-cCCCCEEEECC
Confidence 77888874 4555544443 2333455667666654 445 46778888874
No 236
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.22 E-value=9.1e-10 Score=100.03 Aligned_cols=230 Identities=7% Similarity=-0.030 Sum_probs=142.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEec---CC
Q psy17902 141 HRASITCIAVTSDSKHVYSACK-----DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGD---NN 211 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~---~d 211 (454)
|-..+.+++++++++++++-.. ++.|.+||+.+++....+.+......+...+..+++++++..+ ++.. .+
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~ 144 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK 144 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC
Confidence 6678999999999876665543 5789999999887655543321111233457899999864444 5444 57
Q ss_pred CcEEEEeCC-CccEEeecccCCCeE-EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902 212 SNIKLWSSS-LEHLHTFTGHKAPIT-GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289 (454)
Q Consensus 212 g~v~vw~~~-~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 289 (454)
+.|.+||+. +.....+..|..... ...+.+++..+.+.+.+|.+..|. ..+..|+|+|+++.|+
T Consensus 145 ~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly 210 (343)
T 2qe8_A 145 AALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLY 210 (343)
T ss_dssp CEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEE
T ss_pred CeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEE
Confidence 899999994 554444544422110 134455677777777788776553 2357899999999888
Q ss_pred EeeCCC-cEEEeeccC---Ce--------EEEEccccCCe-EEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccC
Q psy17902 290 SGGTDK-SVRVWKIQE---ES--------QLVFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG 356 (454)
Q Consensus 290 ~~~~dg-~i~i~d~~~---~~--------~~~~~~~~~~i-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 356 (454)
++...+ .|..++... +. .+...++.... .....+++..+++...++.|.+||..++.........
T Consensus 211 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~-- 288 (343)
T 2qe8_A 211 LSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDE-- 288 (343)
T ss_dssp EEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECG--
T ss_pred EEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECC--
Confidence 877665 444444321 10 00111222222 2334456777777778899999998555432222211
Q ss_pred CCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEE
Q psy17902 357 YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWK 392 (454)
Q Consensus 357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd 392 (454)
...++.+++|.+++.++++.+..+.+.+|.
T Consensus 289 ------~~~~p~~va~~~~g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 289 ------KLSWTDSFNFGSDGYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp ------GGSCEEEEEECTTSCEEEEECCGGGSGGGB
T ss_pred ------ceecCCeeEECCCCcEEEEeCccccccccc
Confidence 123389999999998887777655554443
No 237
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.22 E-value=1.7e-07 Score=95.16 Aligned_cols=282 Identities=9% Similarity=0.050 Sum_probs=179.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL 221 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~ 221 (454)
...|.++...++|+ |..|+.++-|..|+..+..............-....|.++...++|. |..|+.++-|..|+...
T Consensus 309 ~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~ 386 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPIT 386 (795)
T ss_dssp SSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTT
T ss_pred CCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCC
Confidence 35799999998876 56677777788898765432211111001111345699999988887 55577777799999855
Q ss_pred ccEEeecc---------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee----ccCCceeEEEeecCCCEE
Q psy17902 222 EHLHTFTG---------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF----GHQSAITSLDILAKNRVI 288 (454)
Q Consensus 222 ~~~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l 288 (454)
.....+.. ....|.++...+++..|..|+.++-|.+||..+++...... .....|.++...+++.+.
T Consensus 387 ~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lw 466 (795)
T 4a2l_A 387 QRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLW 466 (795)
T ss_dssp CCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEE
T ss_pred CcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEE
Confidence 44443321 23578999988888757788887779999998876443221 134578999988878765
Q ss_pred EEeeCCCcEEEeeccCCeEEEEccc-------cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCC
Q psy17902 289 SSGGTDKSVRVWKIQEESQLVFNGH-------SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSS 361 (454)
Q Consensus 289 ~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 361 (454)
+ |+. +.|.+|+..++....+... ...+.++.....+.+..|+. +-|.+|+..+... .+...... ..
T Consensus 467 i-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~--~~ 539 (795)
T 4a2l_A 467 L-GTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPV--SN 539 (795)
T ss_dssp E-EES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCS--CG
T ss_pred E-Eec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCC--CC
Confidence 5 444 4588999887765544321 24566666666666777777 5688999876654 22110000 00
Q ss_pred CCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 362 SEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 362 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
.....|.++...++|.+.+++. .| |..||..++... .+... -....|.++...++|...+++ +..|..|+.
T Consensus 540 l~~~~i~~i~~d~~g~lWigT~-~G-l~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~lWi~t---~~Gl~~~~~ 612 (795)
T 4a2l_A 540 VTKLFTNCIYEASNGIIWVGTR-EG-FYCFNEKDKQIK-RYNTTNGLPNNVVYGILEDSFGRLWLST---NRGISCFNP 612 (795)
T ss_dssp GGGSCEEEEEECTTSCEEEEES-SC-EEEEETTTTEEE-EECGGGTCSCSCEEEEEECTTSCEEEEE---TTEEEEEET
T ss_pred CCCCeeEEEEECCCCCEEEEeC-CC-ceeECCCCCcEE-EeCCCCCCchhheEEEEECCCCCEEEEc---CCceEEEcC
Confidence 1234599999999998655444 34 888998765332 22211 123468899999999877765 344555654
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.21 E-value=1.5e-08 Score=86.78 Aligned_cols=200 Identities=10% Similarity=0.004 Sum_probs=138.1
Q ss_pred CeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCC-ceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-
Q psy17902 233 PITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQS-AITSLDILAKNRVISSGGTDKSVRVWKIQEESQL- 308 (454)
Q Consensus 233 ~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~- 308 (454)
....+.|++++.++++.+. ++.|.++|+.+++.+..+..... ....+++.. +.+.++.-.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEE
Confidence 3579999998644444443 57999999999998887652221 223455552 344444556889999999998877
Q ss_pred EEccc-cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902 309 VFNGH-SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC 387 (454)
Q Consensus 309 ~~~~~-~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 387 (454)
.+... ..+. ...+++..++++..++.|.++|..+.+.+..+....... .-..++.+.|. +|.+.+....++.
T Consensus 101 ~i~~g~~~g~--glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~----p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 101 NFTHQMKDGW--GLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGH----RVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEECCSSSCC--EEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred EEECCCCCeE--EEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCc----ccccceeEEEE-CCEEEEecCCCCe
Confidence 33222 2222 233466666666678999999999998888887643210 01126788888 7766666656789
Q ss_pred EEEEEcCCCceeeEeccCC-----------CceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 388 VKLWKITPKRTLEFLQDIP-----------LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 388 v~iwd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
|.+.|..+++.+..+.... .....+.++|+|+++.|++++...+.|...+..+
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 9999999999888876421 1135689999999999888877788887777654
No 239
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.20 E-value=2.2e-07 Score=94.40 Aligned_cols=281 Identities=10% Similarity=0.112 Sum_probs=177.9
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE
Q psy17902 145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHL 224 (454)
Q Consensus 145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~ 224 (454)
|.++...+++. |..|+.++.|..|+..+......... .....|.++...+++.+.+. +.++-+.+|+......
T Consensus 175 i~~i~~d~~g~-lwigt~~~Gl~~~~~~~~~~~~~~~~-----~~~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~ 247 (795)
T 4a2l_A 175 IASTLYRQGDQ-IYIGTSTDGLYTYSITQKTFEKVIPI-----LGTKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEI 247 (795)
T ss_dssp CEEEEEEETTE-EEEEESSSCEEEEETTTCCEEECC---------CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEE
T ss_pred eEEEEECCCCC-EEEEECCCCEEEEeCCCCeEEEecCC-----CCCCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeE
Confidence 88888887775 44566655688899876654332111 13457889988888875554 4344488899855544
Q ss_pred Eeecc--------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec-------cCCceeEEEeecCCCEEE
Q psy17902 225 HTFTG--------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG-------HQSAITSLDILAKNRVIS 289 (454)
Q Consensus 225 ~~~~~--------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~ 289 (454)
..+.. ....|.++...++|. |..|+.+ -|.+||..++........ ....|.++...++|.+ .
T Consensus 248 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-W 324 (795)
T 4a2l_A 248 KNYLHSPSNPKSISSNYIRSLAMDSQNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-W 324 (795)
T ss_dssp EEECCCTTCTTSCSCSBEEEEEECTTSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-E
T ss_pred EEeecCCCCccccCCCeEEEEEEcCCCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-E
Confidence 44321 135699999887776 5555555 489999887765432211 2356999999888765 4
Q ss_pred EeeCCCcEEEeeccCCeEEEEcc-------ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCC
Q psy17902 290 SGGTDKSVRVWKIQEESQLVFNG-------HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSS 362 (454)
Q Consensus 290 ~~~~dg~i~i~d~~~~~~~~~~~-------~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 362 (454)
.|+.++-|..|+..+.....+.. ....|.++.....+.|..|+.++-|..|+..++............. ...
T Consensus 325 igt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~-~~l 403 (795)
T 4a2l_A 325 LGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESA-RGI 403 (795)
T ss_dssp EEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC-------CC
T ss_pred EEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcc-cCC
Confidence 57777789999877654433321 2334677776667778889988889999987654332211100000 001
Q ss_pred CCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc--CCCceeeeEEEEcCCCCEEEEEecCCCceeeeeee
Q psy17902 363 EPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD--IPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 363 ~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~--~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~ 439 (454)
....|.++...++|++|.+|+.++-|.+|+..+++....... ......|.++...++|...+.+ . +.|.+|+..
T Consensus 404 ~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt-~--~Gl~~~~~~ 479 (795)
T 4a2l_A 404 GSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGT-L--SALVRFNPE 479 (795)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEE-S--SCEEEEETT
T ss_pred CCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEe-c--CceeEEeCC
Confidence 134599999999998566677766799999887654332211 0134568999999988877655 3 346666643
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.18 E-value=5.5e-08 Score=84.79 Aligned_cols=219 Identities=8% Similarity=-0.025 Sum_probs=137.2
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCC
Q psy17902 144 SITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSL 221 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~ 221 (454)
.+.+++|++++..|+.+. ..+.|..+++.+........ ........+++++++..|+ +-...+.|.++++.+
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~------~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR------QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC------TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE------CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 367999999766665554 56899999987654322211 1224678999999755444 445568999999965
Q ss_pred ccEEeecc-cCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEEE-EeeCCC
Q psy17902 222 EHLHTFTG-HKAPITGLAISFECDTLYSSSN---DRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVIS-SGGTDK 295 (454)
Q Consensus 222 ~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~-~~~~dg 295 (454)
.....+.. .......++++|++..|+.+.. .+.|..+++.... ...+. ........+++++++..|+ +-...+
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~ 189 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTH 189 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCC
Confidence 54433322 2246789999997666666654 3688888876433 22222 2334578999999876554 444567
Q ss_pred cEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902 296 SVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375 (454)
Q Consensus 296 ~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 375 (454)
.|.++++.......+.........+....+..+++....+.|.++|..+++.+..+...... ....+++.|+
T Consensus 190 ~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~--------~p~gi~~~~~ 261 (267)
T 1npe_A 190 RAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQT--------RLYGITIALS 261 (267)
T ss_dssp EEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCC--------CCCCEEEECS
T ss_pred EEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEcccccc--------ccceeeecCc
Confidence 89999987654432221111122333333434444446789999999988888877643210 1455777776
Q ss_pred CC
Q psy17902 376 SD 377 (454)
Q Consensus 376 ~~ 377 (454)
+.
T Consensus 262 ~~ 263 (267)
T 1npe_A 262 QC 263 (267)
T ss_dssp CC
T ss_pred cC
Confidence 53
No 241
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.18 E-value=9.4e-08 Score=83.30 Aligned_cols=253 Identities=9% Similarity=-0.015 Sum_probs=149.4
Q ss_pred CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCCccEEeec-ccCC
Q psy17902 155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSLEHLHTFT-GHKA 232 (454)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~~~~~~~~-~~~~ 232 (454)
.+|+.+.. +.|+.+++....... +............+..++|++++..|+ +-...+.|.++++.+.....+. ....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~-~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~ 79 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKK-TEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLG 79 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCG-GGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCC
T ss_pred cEEEEEcC-CeEEEEEecCccccc-ccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCC
Confidence 45666554 578888887643211 000000001123567899999655555 4455789999999655443332 2235
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC---CCcEEEeeccCCeEE
Q psy17902 233 PITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT---DKSVRVWKIQEESQL 308 (454)
Q Consensus 233 ~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~ 308 (454)
....+++++++..|+.+ ...+.|.++++..................++++|++..|+.+.. .+.|..+++......
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred CccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 67899999976655555 45678999998754322222222245689999997665555443 368888887654332
Q ss_pred EEc-cccCCeEEEEe-cCCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC
Q psy17902 309 VFN-GHSRGIDMTRR-VNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD 385 (454)
Q Consensus 309 ~~~-~~~~~i~~~~~-~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 385 (454)
.+. ........+.+ ++++.|+ +....+.|.++++........+.. ......++.. .+.++++....
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~----------~~~P~gi~~d-~~~lyva~~~~ 228 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG----------LQYPFAVTSY-GKNLYYTDWKT 228 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC----------CCSEEEEEEE-TTEEEEEETTT
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC----------CCCceEEEEe-CCEEEEEECCC
Confidence 221 22222333444 4455554 444678899999875433222221 1114566664 44455555567
Q ss_pred CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC
Q psy17902 386 GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK 421 (454)
Q Consensus 386 g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~ 421 (454)
+.|.++|..+++.+..+... .......+++.|++.
T Consensus 229 ~~v~~~d~~~g~~~~~i~~g-~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 229 NSVIAMDLAISKEMDTFHPH-KQTRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTTTEEEEEECCS-SCCCCCCEEEECSCC
T ss_pred CeEEEEeCCCCCceEEEccc-cccccceeeecCccC
Confidence 89999999989888877631 122467888888875
No 242
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.14 E-value=7.6e-09 Score=102.34 Aligned_cols=263 Identities=14% Similarity=0.115 Sum_probs=165.9
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCC---CCCCceEEEEEeCCCcEEEEecC------CCcEEEEeC-CCcc
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR---KSYPPILALAVANNNELVASGDN------NSNIKLWSS-SLEH 223 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~------dg~v~vw~~-~~~~ 223 (454)
+..|++++.||.|..+|..+++............ ....++ +. ++ .++++.. +|.|..+|. +++.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~----v~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~ 190 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPR----VV-KG-KVIIGNGGAEYGVRGFVSAYDADTGKL 190 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCE----EE-TT-EEEECCBCTTTCCBCEEEEEETTTCCE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCE----EE-CC-EEEEeCCCCCcCCCCEEEEEECCCCcE
Confidence 4678888999999999999999887654321100 011111 11 44 4555433 589999998 7777
Q ss_pred EEeecccC-------------------------------CCeEEEEEcCCCCEEEEEeCCCc------------------
Q psy17902 224 LHTFTGHK-------------------------------APITGLAISFECDTLYSSSNDRS------------------ 254 (454)
Q Consensus 224 ~~~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~dg~------------------ 254 (454)
+..+.... .....+++.+...+++.++.++.
T Consensus 191 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~ 270 (668)
T 1kv9_A 191 AWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLS 270 (668)
T ss_dssp EEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 77664210 11124688888888888887763
Q ss_pred -EEEEeCCCceeEEEeec--cC-------CceeEEEeecCCC---EEEEeeCCCcEEEeeccCCeEEE-Ecccc------
Q psy17902 255 -IKVWNIEDRAYVETLFG--HQ-------SAITSLDILAKNR---VISSGGTDKSVRVWKIQEESQLV-FNGHS------ 314 (454)
Q Consensus 255 -i~iwd~~~~~~~~~~~~--~~-------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~-~~~~~------ 314 (454)
|..+|..+++.+..+.. |. .++....+..+++ .++.++.+|.++++|..+++.+. .....
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 350 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEK 350 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccc
Confidence 99999999998877753 22 2333333334664 68889999999999999988761 11000
Q ss_pred ------CCe-------------------------EEEEecCCCEEEEE--------------------------------
Q psy17902 315 ------RGI-------------------------DMTRRVNDQQFITC-------------------------------- 331 (454)
Q Consensus 315 ------~~i-------------------------~~~~~~~~~~l~~~-------------------------------- 331 (454)
.++ .....+....+++.
T Consensus 351 ~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 430 (668)
T 1kv9_A 351 VDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATD 430 (668)
T ss_dssp ECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCC
T ss_pred cccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCC
Confidence 000 01112222333321
Q ss_pred ----eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCC
Q psy17902 332 ----GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL 407 (454)
Q Consensus 332 ----~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 407 (454)
..+|.|..||+.+++.+...+.... .....+...+.++++++.||.|++||..+++.+..+... .
T Consensus 431 ~p~~~~~g~l~A~D~~tG~~~W~~~~~~~----------~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~-~ 499 (668)
T 1kv9_A 431 VPAAVVSGALLAWDPVKQKAAWKVPYPTH----------WNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ-S 499 (668)
T ss_dssp CCGGGCEEEEEEEETTTTEEEEEEEESSS----------CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS-S
T ss_pred CCCCCccceEEEEeCCCCcEEEEccCCCC----------CcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC-C
Confidence 1247899999999998888765322 222334456788999999999999999999988877652 1
Q ss_pred ceeeeEEEEcCCCC-EEEEEecCCCce
Q psy17902 408 SGVINSLVFTSDHK-HLVAGIGTEHRF 433 (454)
Q Consensus 408 ~~~v~~l~~s~d~~-~l~~~~~~d~~i 433 (454)
.....-+.+..+|+ +++++.|.++.+
T Consensus 500 ~~~~~p~~~~~~G~~yva~~~G~g~~~ 526 (668)
T 1kv9_A 500 GIVAAPMTFELAGRQYVAIMAGWGGVA 526 (668)
T ss_dssp CCCSCCEEEEETTEEEEEEEECCCSHH
T ss_pred CcccCceEEEECCEEEEEEEecCCCcc
Confidence 11113345556776 566665655543
No 243
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.11 E-value=5e-08 Score=88.97 Aligned_cols=231 Identities=11% Similarity=0.085 Sum_probs=142.2
Q ss_pred CCCCEEEEE-eCCCeEEEEEcCCC----ceecccCCcccC-CCCCCceEEEEEeCCCcEEEEecCC------CcEEEEeC
Q psy17902 152 SDSKHVYSA-CKDGIIIKWLLETR----SKVCSSPFVKTD-RKSYPPILALAVANNNELVASGDNN------SNIKLWSS 219 (454)
Q Consensus 152 ~~~~~l~~~-~~dg~i~iwd~~~~----~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d------g~v~vw~~ 219 (454)
++.++|++. ..++.|.++|+.+. +....+...... .........+...|+| +++++..+ |.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 777777664 46689999998754 333322100000 0011134567788999 66666554 78999998
Q ss_pred -CCccEEeecccCC---CeEEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCceeEEEeecc--CC
Q psy17902 220 -SLEHLHTFTGHKA---PITGLAISFECDTLYSSS-------------------NDRSIKVWNIEDRAYVETLFGH--QS 274 (454)
Q Consensus 220 -~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~-------------------~dg~i~iwd~~~~~~~~~~~~~--~~ 274 (454)
+.+.+.++..... .-+.+.|+|+++.+++.. ...+|.+||+.+++.+.++..- ..
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 5677777653222 234588899999888885 3689999999998888777542 12
Q ss_pred ceeEEEe--ecCCCEEEEee------CCCcEEEeeccCCeEE-----EEcc-----------------ccCCeEEEEecC
Q psy17902 275 AITSLDI--LAKNRVISSGG------TDKSVRVWKIQEESQL-----VFNG-----------------HSRGIDMTRRVN 324 (454)
Q Consensus 275 ~v~~~~~--~~~~~~l~~~~------~dg~i~i~d~~~~~~~-----~~~~-----------------~~~~i~~~~~~~ 324 (454)
....|.| +|+++++++++ .+++|.+|....+... .+.. ...+......++
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 3445555 99999887777 4568887766543221 0111 112233445566
Q ss_pred CCEEEEEe-CCCCEEEEecCCC---ccceeeecccCC---C--CCCCCCCcEEEEEEecCCCEEEEec
Q psy17902 325 DQQFITCG-EDGTLSLWSILKK---VPTHTIPVAHGY---D--SSSSEPNWITSVACLHNSDLVASGS 383 (454)
Q Consensus 325 ~~~l~~~~-~dg~i~iwd~~~~---~~~~~~~~~~~~---~--~~~~~~~~i~~~~~s~~~~~l~~~~ 383 (454)
+.+|.++. ..+.|.+||+... +.+..+...... . ....-......++++|+|++|+++.
T Consensus 332 GrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 332 DKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp SCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 77766655 5789999998632 344444433110 0 0000012357799999999988887
No 244
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.11 E-value=4.8e-08 Score=83.64 Aligned_cols=201 Identities=9% Similarity=0.033 Sum_probs=132.6
Q ss_pred ceEEEEEeCCCcEEEEecC--CCcEEEEeC-CCccEEeecccC-CCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeE
Q psy17902 192 PILALAVANNNELVASGDN--NSNIKLWSS-SLEHLHTFTGHK-APITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYV 266 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~--dg~v~vw~~-~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~ 266 (454)
....++|++++.+.++.+. ++.|.++|+ +++.+..+.-.. .....+++. ++.|+.+. .++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 4678999998765555443 579999999 666666654221 222345554 55555554 5789999999999998
Q ss_pred EEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc-c-ccC---CeEEEEecCCCEEEEEeCCCCEEEE
Q psy17902 267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN-G-HSR---GIDMTRRVNDQQFITCGEDGTLSLW 340 (454)
Q Consensus 267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~-~-~~~---~i~~~~~~~~~~l~~~~~dg~i~iw 340 (454)
..+...... ...++++++.++++..++.|.++|..+.+.. ... + ... ....+.+.++..++....++.|.+.
T Consensus 100 ~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 100 KNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEE
T ss_pred EEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCCCCeEEEE
Confidence 887532122 2335567877777777889999999987766 221 1 111 2344445555444444467899999
Q ss_pred ecCCCccceeeecccCC----CCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCCC
Q psy17902 341 SILKKVPTHTIPVAHGY----DSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 341 d~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~~ 396 (454)
|..+++.+..+...... ............|+|+|+++ +++++...+.|.+.++...
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 99999999998764110 00001123479999999986 6666777889999988654
No 245
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=99.10 E-value=7.1e-08 Score=93.50 Aligned_cols=284 Identities=12% Similarity=0.075 Sum_probs=169.6
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCC---CCCCceEEEEEeC--CCc-EEEEec------CCCcEEEEeC-C
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDR---KSYPPILALAVAN--NNE-LVASGD------NNSNIKLWSS-S 220 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~--~~~-~l~~~~------~dg~v~vw~~-~ 220 (454)
+..|++++.++.|..+|..+++............ ....++ + ... +++ .|++++ .+|.|..+|. +
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~--v-~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t 193 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPT--I-VKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT 193 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCE--E-EECTTTCCEEEEECCBCGGGCCBCEEEEECTTT
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCE--E-eCCCcCCcEEEEEeccccccCCCCEEEEEECCC
Confidence 4678888999999999999999876654321100 011122 1 111 233 566654 3789999998 6
Q ss_pred CccEEeecccCCC-----------------------------------------eEEEEEcCCCCEEEEEeC--------
Q psy17902 221 LEHLHTFTGHKAP-----------------------------------------ITGLAISFECDTLYSSSN-------- 251 (454)
Q Consensus 221 ~~~~~~~~~~~~~-----------------------------------------v~~~~~~~~~~~l~~~~~-------- 251 (454)
++.+......... -..+++.|...+++.++.
T Consensus 194 G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~ 273 (582)
T 1flg_A 194 GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTW 273 (582)
T ss_dssp CCEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGG
T ss_pred CCEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCc
Confidence 7766654321100 013456677777777663
Q ss_pred ------------C----CcEEEEeCCCceeEEEeec--cC--------CceeEEEee-cCC---CEEEEeeCCCcEEEee
Q psy17902 252 ------------D----RSIKVWNIEDRAYVETLFG--HQ--------SAITSLDIL-AKN---RVISSGGTDKSVRVWK 301 (454)
Q Consensus 252 ------------d----g~i~iwd~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~---~~l~~~~~dg~i~i~d 301 (454)
| +.|..+|..+++.+..+.. |. .++. +... .+| ..++.++.+|.++++|
T Consensus 274 ~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD 352 (582)
T 1flg_A 274 ARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVD 352 (582)
T ss_dssp GGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEE
T ss_pred ccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEE
Confidence 2 5899999999998877643 21 1221 1221 356 3788899999999999
Q ss_pred ccCCeEE-EEcccc-------------CCe------------------EE---------------EEecCCCEEEEEe--
Q psy17902 302 IQEESQL-VFNGHS-------------RGI------------------DM---------------TRRVNDQQFITCG-- 332 (454)
Q Consensus 302 ~~~~~~~-~~~~~~-------------~~i------------------~~---------------~~~~~~~~l~~~~-- 332 (454)
..+++.+ .+.... .++ .. ...+....+++..
T Consensus 353 ~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~ 432 (582)
T 1flg_A 353 RSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANH 432 (582)
T ss_dssp TTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEEC
T ss_pred CCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechh
Confidence 9998877 221110 000 00 0111122333221
Q ss_pred -------------------------------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902 333 -------------------------------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381 (454)
Q Consensus 333 -------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 381 (454)
.+|.|..||+.+++.+...+.... +..-.....+.++++
T Consensus 433 ~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~tagglvf~ 502 (582)
T 1flg_A 433 WKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP----------LWAGVLATAGNLVFT 502 (582)
T ss_dssp EEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC----------CCSCCEEETTTEEEE
T ss_pred cceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC----------CcccceEeCCCEEEE
Confidence 357899999999998887764321 111112224668888
Q ss_pred ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC-EEEEEecCCCceeeee-------eeCCCeeEEEEEEee
Q psy17902 382 GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTEHRFGRWK-------TIKGVKNTVAIIDIQ 452 (454)
Q Consensus 382 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d~~i~~W~-------~~~~~~~~~~~~~~~ 452 (454)
|+.||.|+.||..+|+.+-.+... ......-+.|..+|+ |+++..|..+.+-+|- .....-+.+.++.|.
T Consensus 503 g~~dg~l~A~D~~tG~~lW~~~~~-~g~~a~P~~y~~~G~qYv~~~~G~gg~~~~~~~~~~~~~~~~~~g~~~~~f~l~ 580 (582)
T 1flg_A 503 GTGDGYFKAFDAKSGKELWKFQTG-SGIVSPPITWEQDGEQYLGVTVGYGGAVPLWGGDMADLTRPVAQGGSFWVFKLP 580 (582)
T ss_dssp ECTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEEECCCSHHHHHCTHHHHHHTTCCCCCEEEEEECC
T ss_pred ECCCCcEEEEECCCCCEEEEecCC-CCcccCceEEEECCEEEEEEEccCCCcccccccccccccccCCCCCEEEEEeCC
Confidence 999999999999999998877652 121223367778887 5566656566565551 122334566666654
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.10 E-value=6.4e-07 Score=79.72 Aligned_cols=224 Identities=11% Similarity=0.020 Sum_probs=139.3
Q ss_pred CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEE
Q psy17902 191 PPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVET 268 (454)
Q Consensus 191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~ 268 (454)
.....++|+++++++++-..++.|..|+..+.....+. ....+.++++.++++++++..... .|..++..+++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 35678999999997777767899999998665444333 345688999999998666554332 477778777765332
Q ss_pred ee-ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEE--Ecc---------ccCCeEEEEecCCCEEE-EEeCCC
Q psy17902 269 LF-GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV--FNG---------HSRGIDMTRRVNDQQFI-TCGEDG 335 (454)
Q Consensus 269 ~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~--~~~---------~~~~i~~~~~~~~~~l~-~~~~dg 335 (454)
.. ........++..+.+..+++-..++.|+++|...+.... ... .......+ .+++..|+ +-+..+
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi-s~dg~~lyv~d~~~~ 189 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL-KRFGNFLYVSNTEKM 189 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE-EEETTEEEEEETTTT
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc-CcCCCEEEEEeCCCC
Confidence 22 122233455555555555554468889999987643211 111 11122333 55565554 455678
Q ss_pred CEEEEecCC-Ccc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee--EeccCCCcee
Q psy17902 336 TLSLWSILK-KVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE--FLQDIPLSGV 410 (454)
Q Consensus 336 ~i~iwd~~~-~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~--~~~~~~~~~~ 410 (454)
.|.+|++.. +.. ...+... .....++++++|+++++....+.|.+++.. ++... .+.. ....
T Consensus 190 ~I~~~~~~~~g~~~~~~~~~~~----------~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~--~~~~ 256 (306)
T 2p4o_A 190 LLLRIPVDSTDKPGEPEIFVEQ----------TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQ--GVIG 256 (306)
T ss_dssp EEEEEEBCTTSCBCCCEEEEES----------CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGG--TCTT
T ss_pred EEEEEEeCCCCCCCccEEEecc----------CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccc--ccCC
Confidence 999999864 221 1111100 114568999999987777778899999975 54432 2221 2245
Q ss_pred eeEEEEc---CCCCEEEEEecC
Q psy17902 411 INSLVFT---SDHKHLVAGIGT 429 (454)
Q Consensus 411 v~~l~~s---~d~~~l~~~~~~ 429 (454)
+++++|. |++..|+++...
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEECT
T ss_pred ceEEEEecccCCCCEEEEECCC
Confidence 7899999 898888877443
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.10 E-value=1.7e-08 Score=99.79 Aligned_cols=280 Identities=9% Similarity=0.088 Sum_probs=173.7
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCC---C-CCce-EEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEee
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRK---S-YPPI-LALAVANNNELVASGDNNSNIKLWSS-SLEHLHTF 227 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~---~-~~~v-~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~ 227 (454)
+..|++++.++.|..+|..+++.+........... . ...+ ..+++ .+..|++++.++.|..+|. +++.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 56788888899999999999998877653211100 0 0000 11223 2456888888999999998 78877766
Q ss_pred cccC----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccC-----------------------
Q psy17902 228 TGHK----APITG-LAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQ----------------------- 273 (454)
Q Consensus 228 ~~~~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~----------------------- 273 (454)
.... ..+.+ ..+ .+..++++.. +|.|..+|..+++.+..+....
T Consensus 144 ~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp ECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred ccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccc
Confidence 5421 11111 111 1345555543 5899999999999887764210
Q ss_pred --------CceeEEEeecCCCEEEEeeCCC-------------------cEEEeeccCCeEE-EEcc--cc-------CC
Q psy17902 274 --------SAITSLDILAKNRVISSGGTDK-------------------SVRVWKIQEESQL-VFNG--HS-------RG 316 (454)
Q Consensus 274 --------~~v~~~~~~~~~~~l~~~~~dg-------------------~i~i~d~~~~~~~-~~~~--~~-------~~ 316 (454)
.....+++.|...+++.++.++ .|..+|..+++.. .+.. |. .+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 0112468888888888887765 3999999999887 3332 21 12
Q ss_pred eEEEE-ecCCC---EEEEEeCCCCEEEEecCCCccceeeecccC-----CC--CC----------C-----------CCC
Q psy17902 317 IDMTR-RVNDQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHG-----YD--SS----------S-----------SEP 364 (454)
Q Consensus 317 i~~~~-~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-----~~--~~----------~-----------~~~ 364 (454)
..... ..++. .++.++.+|.++++|..+++.+...+.... .. .. . .-.
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~ 381 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAH 381 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSS
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCcccc
Confidence 22211 12343 588899999999999999988755443210 00 00 0 000
Q ss_pred CcEEEEEEecCCCEEEEe------------------------------------cCCCcEEEEEcCCCceeeEeccCCCc
Q psy17902 365 NWITSVACLHNSDLVASG------------------------------------SYDGCVKLWKITPKRTLEFLQDIPLS 408 (454)
Q Consensus 365 ~~i~~~~~s~~~~~l~~~------------------------------------~~dg~v~iwd~~~~~~~~~~~~~~~~ 408 (454)
. -..++++|+..++++. ..+|.|..||+.+++.+-.... .
T Consensus 382 ~-w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~---~ 457 (668)
T 1kv9_A 382 N-WHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPY---P 457 (668)
T ss_dssp C-SSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEE---S
T ss_pred C-CCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccC---C
Confidence 0 0126778876665541 1348899999999987765543 2
Q ss_pred eeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 409 GVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 409 ~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
.++....+...+..++++ +.|+.|+.|+..++.
T Consensus 458 ~~~~~~~~~t~gg~vf~g-~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 458 THWNGGTLSTAGNLVFQG-TAAGQMHAYSADKGE 490 (668)
T ss_dssp SSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred CCCcCceeEeCCCEEEEE-CCcccchhhhhhcCh
Confidence 233334455567888888 789999999876654
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.05 E-value=2e-07 Score=83.65 Aligned_cols=243 Identities=11% Similarity=0.100 Sum_probs=144.9
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccC--------------CCCCCceEEEEEeC-CCcEEEE
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTD--------------RKSYPPILALAVAN-NNELVAS 207 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--------------~~~~~~v~~~~~~~-~~~~l~~ 207 (454)
....+++|++++++++++..++.|..|+..++.... +...... ......+..+++.+ ++++++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v- 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI- 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE-
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCcEEE-
Confidence 345778999999988889899999999887654321 1000000 00113578899997 665444
Q ss_pred ecCCCcEEEEeCCCccEEeecc-----cCCCeEEEEEcC-CCCEEEEEeC-----------------CCcEEEEeCCCce
Q psy17902 208 GDNNSNIKLWSSSLEHLHTFTG-----HKAPITGLAISF-ECDTLYSSSN-----------------DRSIKVWNIEDRA 264 (454)
Q Consensus 208 ~~~dg~v~vw~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~iwd~~~~~ 264 (454)
+...+.|..++..+..+..+.. .......+++.+ +|++.++-.. ++.|..||..+++
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~ 176 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE 176 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE
T ss_pred EECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCE
Confidence 4434558888875443333321 123478899999 8876665432 3679999987776
Q ss_pred eEEEeeccCCceeEEEeecCCCEEEEe-eCCCcEEEeeccCC---eEEEEccccCCeEEEEecCCCEEEEEeC-------
Q psy17902 265 YVETLFGHQSAITSLDILAKNRVISSG-GTDKSVRVWKIQEE---SQLVFNGHSRGIDMTRRVNDQQFITCGE------- 333 (454)
Q Consensus 265 ~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~---~~~~~~~~~~~i~~~~~~~~~~l~~~~~------- 333 (454)
...... .......|+++|+++.|+.+ ...+.|.+|++... ....+.....+-.....+++.++++...
T Consensus 177 ~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d~~G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 177 TTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEELDGNMH 255 (322)
T ss_dssp EEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEECTTSCEEEEEEEETTSSTT
T ss_pred EEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEECCCCCEEEEecCccccccc
Confidence 432222 22345679999999866555 55688999998752 2222211222222333345555555443
Q ss_pred ---CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 334 ---DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 334 ---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
.+.|..+|. .++.+..+....+.. ...++++++ .++.++++....+.|.++++..
T Consensus 256 ~~~~~~v~~~d~-~G~~~~~~~~~~g~~-----~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 256 GRVDPKGIKFDE-FGNILEVIPLPPPFA-----GEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEECT-TSCEEEEEECCTTTT-----TSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCCccEEEEECC-CCCEEEEEECCCCCc-----cccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 466888886 466666655433210 122566666 4666666666778899998753
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.05 E-value=1.5e-07 Score=79.47 Aligned_cols=184 Identities=16% Similarity=0.126 Sum_probs=126.6
Q ss_pred eEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE-EeeCCCcEEEeeccCCeEE-E
Q psy17902 234 ITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS-SGGTDKSVRVWKIQEESQL-V 309 (454)
Q Consensus 234 v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~-~ 309 (454)
...+.|+ ++.++.+.+.+| .|+++|+.+++.+..+.... ......+.+.++.|+ +.-.++.+.+||..+.+.+ .
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~t 122 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRS 122 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEE
Confidence 4788898 666666777766 89999999999988775433 333322333344444 4446889999999998887 3
Q ss_pred EccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEE
Q psy17902 310 FNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVK 389 (454)
Q Consensus 310 ~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~ 389 (454)
+.....+.. +. +++..|+.+..++.|.++|..+.+.+.++....... .-..++.+.|. +|.+.+..-.++.|.
T Consensus 123 i~~~~eG~g-lt-~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~----~~~~lNELe~~-~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 123 FNYDGEGWG-LT-HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGE----ELPELNELEWV-DGEIFANVWQTNKIV 195 (262)
T ss_dssp EECSSCCCC-EE-ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EECCCCceE-Ee-cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCc----cccccceeEEE-CCEEEEEEccCCeEE
Confidence 333222222 22 355666666667889999999999988887643110 01225667776 777666666688999
Q ss_pred EEEcCCCceeeEeccCC----------CceeeeEEEEcCCCCEEEEE
Q psy17902 390 LWKITPKRTLEFLQDIP----------LSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 390 iwd~~~~~~~~~~~~~~----------~~~~v~~l~~s~d~~~l~~~ 426 (454)
+.|..+++.+..+.... .....+.|||+|+++.|+++
T Consensus 196 vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 196 RIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp EECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred EEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 99999999888776521 12356899999999888887
No 250
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.04 E-value=2.2e-06 Score=86.86 Aligned_cols=285 Identities=12% Similarity=0.046 Sum_probs=176.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccC-------Cc-ccCCCCCCceEEEEEeCCCcEEEEecCCCc
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSP-------FV-KTDRKSYPPILALAVANNNELVASGDNNSN 213 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 213 (454)
...|.++...++|. |..|+..+-|.+++..+........ .. ....-....|.++...++|. |..|+.++-
T Consensus 257 ~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~G 334 (781)
T 3v9f_A 257 SSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGG 334 (781)
T ss_dssp CCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSC
T ss_pred CceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCe
Confidence 45699999888775 5566665668888887654322111 00 00112345799999988886 556666677
Q ss_pred EEEEeCCCccEEeecc----------cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe---eccCCceeEEE
Q psy17902 214 IKLWSSSLEHLHTFTG----------HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAITSLD 280 (454)
Q Consensus 214 v~vw~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~v~~~~ 280 (454)
|..++........+.. ....|.++...+++. |..|+.++-|..|+..++...... ......|.++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence 8888875444333321 235688998887765 666776666999998765432211 12346788998
Q ss_pred eecCCCEEEEeeCCCcEEEeeccCCeEEEEcc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCC
Q psy17902 281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY 357 (454)
Q Consensus 281 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 357 (454)
..+++.+.+ |+.++.|..++..++....+.. ....+.++.....+.|..|+. +-|.+||..++......... .
T Consensus 414 ~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~-~- 489 (781)
T 3v9f_A 414 KDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYDTS-N- 489 (781)
T ss_dssp ECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSCCEEECTT-T-
T ss_pred ECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeEEecccCc-c-
Confidence 877776554 6666779999988776554432 234566776666777888877 55889998776543322111 0
Q ss_pred CCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902 358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~ 435 (454)
.......|.++...++|.+.+.....| |..|+..++.. ..+... -....|.++...++|...+++ . .|.|..
T Consensus 490 --~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~-~Glv~~ 563 (781)
T 3v9f_A 490 --SQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLAT-G-EGLVCF 563 (781)
T ss_dssp --SSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEE-T-TEEEEE
T ss_pred --cccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEE-C-CCceEE
Confidence 001134599999999888655444355 78888766533 233211 124568999999999877665 3 555466
Q ss_pred eeee
Q psy17902 436 WKTI 439 (454)
Q Consensus 436 W~~~ 439 (454)
|+..
T Consensus 564 ~d~~ 567 (781)
T 3v9f_A 564 PSAR 567 (781)
T ss_dssp SCTT
T ss_pred ECCC
Confidence 6654
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.03 E-value=4.1e-07 Score=88.07 Aligned_cols=280 Identities=9% Similarity=0.000 Sum_probs=168.4
Q ss_pred CCEEEEEeC-CCeEEEEEc-CCCceecccCCcccCCCC----C-CceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEE
Q psy17902 154 SKHVYSACK-DGIIIKWLL-ETRSKVCSSPFVKTDRKS----Y-PPILALAVANNNELVASGDNNSNIKLWSS-SLEHLH 225 (454)
Q Consensus 154 ~~~l~~~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~----~-~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~ 225 (454)
+..|++++. ++.|.-+|. .+++.+............ . .....+++ .+..|++++.++.|..+|. +++.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 456777777 899999999 898887766542210000 0 00011223 2456788888999999998 777776
Q ss_pred eecccC----CCeEE-EEEcCCCCEEEEEeC------CCcEEEEeCCCceeEEEeeccCCc-------------------
Q psy17902 226 TFTGHK----APITG-LAISFECDTLYSSSN------DRSIKVWNIEDRAYVETLFGHQSA------------------- 275 (454)
Q Consensus 226 ~~~~~~----~~v~~-~~~~~~~~~l~~~~~------dg~i~iwd~~~~~~~~~~~~~~~~------------------- 275 (454)
.+.... ..+.+ ... .+..+++++. ++.|..+|..+++.+..+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~ 217 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQF 217 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCS
T ss_pred EecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCccccccccccccc
Confidence 654221 01211 111 1345666554 789999999999988776532111
Q ss_pred -------------------eeEEEeecCCCEEEEeeCC----------------CcEEEeeccCCeEE-EEcc--c----
Q psy17902 276 -------------------ITSLDILAKNRVISSGGTD----------------KSVRVWKIQEESQL-VFNG--H---- 313 (454)
Q Consensus 276 -------------------v~~~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~~~-~~~~--~---- 313 (454)
...+++.+....++.+..+ +.|..+|..+++.. .+.. |
T Consensus 218 ~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d 297 (571)
T 2ad6_A 218 GLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWD 297 (571)
T ss_dssp SHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSC
T ss_pred ccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccc
Confidence 0235666766666666532 35999999999887 3322 1
Q ss_pred ----cCCeEEEEecCCC---EEEEEeCCCCEEEEecCCCccceeeecccCCC--------C-C-----------------
Q psy17902 314 ----SRGIDMTRRVNDQ---QFITCGEDGTLSLWSILKKVPTHTIPVAHGYD--------S-S----------------- 360 (454)
Q Consensus 314 ----~~~i~~~~~~~~~---~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------~-~----------------- 360 (454)
..++..-...++. .++.++.+|.+.++|..+++.+.......... . .
T Consensus 298 ~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 377 (571)
T 2ad6_A 298 FAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTN 377 (571)
T ss_dssp CCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEE
T ss_pred cccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceE
Confidence 1122211112442 46778889999999999999887765432100 0 0
Q ss_pred -----CCCCCcEEEEEEecCCCEEEEec-------------------------------------CCCcEEEEEcCCCce
Q psy17902 361 -----SSEPNWITSVACLHNSDLVASGS-------------------------------------YDGCVKLWKITPKRT 398 (454)
Q Consensus 361 -----~~~~~~i~~~~~s~~~~~l~~~~-------------------------------------~dg~v~iwd~~~~~~ 398 (454)
.+...+ ..++++|+..+|++.+ .+|.|..||+.+++.
T Consensus 378 ~~P~~~Gg~~w-~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 378 ICPSAMGFHNQ-GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp ESSCTTCSSCS-CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred ECCCCccccCC-CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 000000 2467888777666643 357899999999987
Q ss_pred eeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 399 LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 399 ~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+-.+.. ...+.+..+...+..++++ +.|+.|+.||..++.
T Consensus 457 ~W~~~~---~~~~~~~~~~t~gg~v~~g-~~dg~l~a~D~~tG~ 496 (571)
T 2ad6_A 457 KWTKWE---KFAAWGGTLYTKGGLVWYA-TLDGYLKALDNKDGK 496 (571)
T ss_dssp EEEEEE---SSCCCSBCEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred EEEecC---CCCccceeEEECCCEEEEE-cCCCeEEEEECCCCC
Confidence 766543 2223333333346677776 789999999876654
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.03 E-value=1.2e-07 Score=89.62 Aligned_cols=188 Identities=8% Similarity=0.018 Sum_probs=128.1
Q ss_pred CCCEEEEEeC-CCcEEEEeCCCceeEEEeec-cCCceeEEEe-e-cCCCEEEEee------------------CCCcEEE
Q psy17902 242 ECDTLYSSSN-DRSIKVWNIEDRAYVETLFG-HQSAITSLDI-L-AKNRVISSGG------------------TDKSVRV 299 (454)
Q Consensus 242 ~~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~-~-~~~~~l~~~~------------------~dg~i~i 299 (454)
||++|++... ++.|.+.|+.+.++...+.- ....+..+++ + |++.++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 7788887665 55799999999998774432 2345778887 5 8999998884 3457899
Q ss_pred eeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCC--------------------------------------CEEEE
Q psy17902 300 WKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDG--------------------------------------TLSLW 340 (454)
Q Consensus 300 ~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg--------------------------------------~i~iw 340 (454)
.|..+.+.. ...-...+-.+...+++.++++.+.+. .|.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 999987766 222111333344555667766666432 47777
Q ss_pred ecCC--Ccc-ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCcee---------eEeccCCC
Q psy17902 341 SILK--KVP-THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTL---------EFLQDIPL 407 (454)
Q Consensus 341 d~~~--~~~-~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~---------~~~~~~~~ 407 (454)
|..+ +.. +..++.... ..++.++|||++++++ ..+.+|.++|+.+.+.. ........
T Consensus 260 D~~~~~~~~~~~~Ipvg~~----------PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v 329 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPIANN----------PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL 329 (595)
T ss_dssp ECSGGGCCSSEEEEEEESS----------CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC
T ss_pred eCcccCCceeEEEEecCCC----------ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC
Confidence 7776 434 445544321 5679999999966555 46889999999854210 01112234
Q ss_pred ceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 408 SGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 408 ~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
......++|+|+| +++++.--|+.|.+|+...
T Consensus 330 G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 330 GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred CCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 5568889999999 8888878999999999865
No 253
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.03 E-value=3.9e-08 Score=97.38 Aligned_cols=272 Identities=11% Similarity=0.024 Sum_probs=149.9
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------eEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CCc
Q psy17902 147 CIAVTS-DSKHVYSACKDG-----------IIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NSN 213 (454)
Q Consensus 147 ~~~~s~-~~~~l~~~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~ 213 (454)
++++.+ ++++++.|+.+. .+.+||..+..-....... ..+.....++++..+++++++|+. +..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~---~~~~~~~~~~~~~~~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV---TKHDMFCPGISMDGNGQIVVTGGNDAKK 266 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE---CSCCCSSCEEEECTTSCEEEECSSSTTC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC---CCCCCccccccCCCCCCEEEeCCCCCCc
Confidence 556667 888888887543 5888998876532211110 112223345677889999999984 458
Q ss_pred EEEEeCCCccEEeecc-cCC-CeEEEEEcCCCCEEEEEe-CC-----CcEEEEeCCCceeEEEe----eccCCceeEEEe
Q psy17902 214 IKLWSSSLEHLHTFTG-HKA-PITGLAISFECDTLYSSS-ND-----RSIKVWNIEDRAYVETL----FGHQSAITSLDI 281 (454)
Q Consensus 214 v~vw~~~~~~~~~~~~-~~~-~v~~~~~~~~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~----~~~~~~v~~~~~ 281 (454)
+.+||.....-..+.. +.. .-.+++..+++++++.|+ .+ ..+.+||..+.+....- ......-....+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGG
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccccccee
Confidence 9999983322222211 111 123455667899999988 34 56999999877643320 000000000112
Q ss_pred ecCCCEEEEeeCCC---------cEEEeeccCCeEEEEcc-cc---------CCeEEEEe--cCCCEEEEEeCCC-----
Q psy17902 282 LAKNRVISSGGTDK---------SVRVWKIQEESQLVFNG-HS---------RGIDMTRR--VNDQQFITCGEDG----- 335 (454)
Q Consensus 282 ~~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~-~~---------~~i~~~~~--~~~~~l~~~~~dg----- 335 (454)
..++..++.|+.+| .+..||..+.......+ .. ..-.++.+ .++..++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 23444445554443 46788887765432111 11 11123332 2566677777432
Q ss_pred ------CEEEEecCCCccceee--ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----------CcEEEEEcCCC
Q psy17902 336 ------TLSLWSILKKVPTHTI--PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----------GCVKLWKITPK 396 (454)
Q Consensus 336 ------~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----------g~v~iwd~~~~ 396 (454)
.|.+||..+..-.... ... ....-.++...|++++++.|+.+ ..+.+||..++
T Consensus 427 ~~~~~~~v~~yd~~~~~W~~~~~~~mp--------~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTSPNTVFASNGLY--------FARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp CCCCEEEEECCSTTSCCEEEECTTCCS--------SCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred cCCcceEEEcCCCCCCCeeEEccCCCC--------CCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 5778887665432221 111 11113345667899999999864 46899999775
Q ss_pred ceeeEeccCCCcee-eeEEEEcCCCCEEEEEecCC
Q psy17902 397 RTLEFLQDIPLSGV-INSLVFTSDHKHLVAGIGTE 430 (454)
Q Consensus 397 ~~~~~~~~~~~~~~-v~~l~~s~d~~~l~~~~~~d 430 (454)
+ ...+...+.... ..+..+.|||+.+++|++.+
T Consensus 499 ~-W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~ 532 (656)
T 1k3i_A 499 T-FYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLC 532 (656)
T ss_dssp E-EEECCCCSSCCCTTEEEEECTTSCEEEEECCCC
T ss_pred c-eeecCCCCCccccccHhhcCCCcEEEecCCCCC
Confidence 4 223332222222 23455679999999885433
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.02 E-value=3.1e-07 Score=88.95 Aligned_cols=283 Identities=7% Similarity=-0.022 Sum_probs=167.6
Q ss_pred CCEEEEEeC-CCeEEEEEc-CCCceecccCCcccCCCC-----CCceEEEEEeCCCcE----EEEecCCCcEEEEeC-CC
Q psy17902 154 SKHVYSACK-DGIIIKWLL-ETRSKVCSSPFVKTDRKS-----YPPILALAVANNNEL----VASGDNNSNIKLWSS-SL 221 (454)
Q Consensus 154 ~~~l~~~~~-dg~i~iwd~-~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~----l~~~~~dg~v~vw~~-~~ 221 (454)
+..|++++. ++.|.-+|. .+++.+............ ......++++|.+.. |++++.++.|..+|. ++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456777777 889999999 899887766542211000 001122455443334 788888999999998 77
Q ss_pred ccEEeecccC----CCeEE-EEEcCCCCEEEEEe------CCCcEEEEeCCCceeEEEeeccCCc---------------
Q psy17902 222 EHLHTFTGHK----APITG-LAISFECDTLYSSS------NDRSIKVWNIEDRAYVETLFGHQSA--------------- 275 (454)
Q Consensus 222 ~~~~~~~~~~----~~v~~-~~~~~~~~~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~--------------- 275 (454)
+.+....... ..+.+ -.+. ++ .+++++ .+|.|+.+|..+++.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 7776654321 01111 1111 33 555555 3799999999999988776532111
Q ss_pred ----------------------e-eEEEeecCCCEEEEeeCC----------------CcEEEeeccCCeEE-EEccccC
Q psy17902 276 ----------------------I-TSLDILAKNRVISSGGTD----------------KSVRVWKIQEESQL-VFNGHSR 315 (454)
Q Consensus 276 ----------------------v-~~~~~~~~~~~l~~~~~d----------------g~i~i~d~~~~~~~-~~~~~~~ 315 (454)
+ ..+++.+...+++.+..+ +.|..+|..+++.. .+.....
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~ 299 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPH 299 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTT
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCC
Confidence 0 135566777777777655 37999999999887 3332211
Q ss_pred ---------CeEEEEe--cCC---CEEEEEeCCCCEEEEecCCCccceeeecccCC------CCCCC-------------
Q psy17902 316 ---------GIDMTRR--VND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGY------DSSSS------------- 362 (454)
Q Consensus 316 ---------~i~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~------~~~~~------------- 362 (454)
....+.. .++ ..++.++.+|.+.++|..+++.+......... .....
T Consensus 300 d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~ 379 (599)
T 1w6s_A 300 DEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMD 379 (599)
T ss_dssp CSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTT
T ss_pred ccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCC
Confidence 1111222 245 35677889999999999999988776543200 00000
Q ss_pred CCCc-----------EEEEEEecCCCEEEEe---------------------------------c------CCCcEEEEE
Q psy17902 363 EPNW-----------ITSVACLHNSDLVASG---------------------------------S------YDGCVKLWK 392 (454)
Q Consensus 363 ~~~~-----------i~~~~~s~~~~~l~~~---------------------------------~------~dg~v~iwd 392 (454)
.... -..++++|+..+|++. + ..|.|..||
T Consensus 380 ~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D 459 (599)
T 1w6s_A 380 HLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYN 459 (599)
T ss_dssp CCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEEC
T ss_pred CCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEE
Confidence 0000 1235667666555442 1 357899999
Q ss_pred cCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 393 ITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+.+++.+-.... ..++.+-.+.-.+..++++ +.|+.|+.||..++.
T Consensus 460 ~~tG~~~W~~~~---~~~~~~g~~~tagg~vf~g-t~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 460 AITGDYKWEKME---RFAVWGGTMATAGDLVFYG-TLDGYLKARDSDTGD 505 (599)
T ss_dssp TTTCCEEEEEEE---SSCCCSBCEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred CCCCCEEeEecC---CCCccCcceEecCCEEEEE-CCCCeEEEEECCCCC
Confidence 999977655542 1122211122346677776 689999988876664
No 255
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.01 E-value=1.2e-07 Score=80.03 Aligned_cols=182 Identities=11% Similarity=0.070 Sum_probs=127.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeE--EEeecCCCEEEEeeCCCcEEEeeccCCeEE-EE
Q psy17902 234 ITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITS--LDILAKNRVISSGGTDKSVRVWKIQEESQL-VF 310 (454)
Q Consensus 234 v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~ 310 (454)
...+.|+ ++.++++.+.+|.|+++|+.+++.+..+ - ...... +++.. +.+.++.-.++.+.+||..+.+.+ .+
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 4688887 4566777788899999999999988776 2 223333 55432 244444557899999999998887 33
Q ss_pred ccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEE
Q psy17902 311 NGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL 390 (454)
Q Consensus 311 ~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i 390 (454)
.....+..+. +++..|+.+..++.|.++|..+.+.+.++....... .-..++.+.|. +|.+.+....++.|.+
T Consensus 133 ~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~----~v~~lNeLe~~-dG~lyanvw~s~~I~v 205 (268)
T 3nok_A 133 RYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ----PVELINELECA-NGVIYANIWHSSDVLE 205 (268)
T ss_dssp ECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTCSEEEE
T ss_pred eCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc----ccccccccEEe-CCEEEEEECCCCeEEE
Confidence 3322222222 456677777778999999999999888887643211 11226777877 7766666656789999
Q ss_pred EEcCCCceeeEeccCC-----------CceeeeEEEEcCCCCEEEEE
Q psy17902 391 WKITPKRTLEFLQDIP-----------LSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 391 wd~~~~~~~~~~~~~~-----------~~~~v~~l~~s~d~~~l~~~ 426 (454)
.|..+++.+..+.... .....+.|+|+|+++.|+++
T Consensus 206 IDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 206 IDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp ECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred EeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 9999998888776421 12357899999988777776
No 256
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=99.00 E-value=3.2e-06 Score=75.89 Aligned_cols=279 Identities=10% Similarity=0.006 Sum_probs=152.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS 220 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~ 220 (454)
-...+.+|.|.+.+..+++ +..|.| +...+.++.-....... ......+.+|.|.+ +..+++| ..|.|..-.-.
T Consensus 34 ~~~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~--~~~~~~~~~i~~~~-~~~~~~g-~~g~i~~S~Dg 107 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVL--DHSDYRFNSVSFQG-NEGWIVG-EPPIMLHTTDG 107 (327)
T ss_dssp CSSCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCC--SCCCCEEEEEEEET-TEEEEEE-ETTEEEEESST
T ss_pred CCCcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCC--CCCCccEEEEEecC-CeEEEEE-CCCeEEEECCC
Confidence 3457999999877777774 556765 33444443222211100 01234688999986 4545544 45655442212
Q ss_pred CccEEeec---ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEe-eccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902 221 LEHLHTFT---GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAITSLDILAKNRVISSGGTDKS 296 (454)
Q Consensus 221 ~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~ 296 (454)
+..-.... .+...+..+.+.+++..++++ .+|.|.. ....+...... ..+...+..+.+.+++.+++++. .|.
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~ 184 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGS 184 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSS
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCc
Confidence 22212211 234567788887666555544 5665533 22223322222 34556788999999888777664 444
Q ss_pred EEE-eec--cCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe
Q psy17902 297 VRV-WKI--QEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL 373 (454)
Q Consensus 297 i~i-~d~--~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s 373 (454)
++. +|- .+-..+. ......+..+.+.+++.+++++.+|.+++.+...+..-..+.... . .....+.++.+.
T Consensus 185 ~~~S~d~gG~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~-~----~~~~~~~~v~~~ 258 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPL-R----RNSVGFLDLAYR 258 (327)
T ss_dssp EEEEECTTCSSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTT-S----SCCSCEEEEEES
T ss_pred EEEEeCCCCCceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCc-c----cCCcceEEEEec
Confidence 433 342 2223322 233345555555555566677778887776422232222221110 0 011238889999
Q ss_pred cCCCEEEEecCCCcEEEEEcCCCceeeEeccC-CCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 374 HNSDLVASGSYDGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 374 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
+++.+++++. +|.| ++....+.....+... .....+.++.|.+++. ++++ |.+|.|..++-
T Consensus 259 ~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~-G~~G~i~~~~~ 320 (327)
T 2xbg_A 259 TPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFIL-GQKGILLRYVT 320 (327)
T ss_dssp SSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEE-CSTTEEEEECC
T ss_pred CCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEE-cCCceEEEEcC
Confidence 8887777665 6666 5566667766665531 1235678899986655 4444 67888876654
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=99.00 E-value=1.8e-07 Score=90.52 Aligned_cols=268 Identities=10% Similarity=0.036 Sum_probs=159.7
Q ss_pred EEEcCCCCE----EEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEec------CCCcEEE
Q psy17902 148 IAVTSDSKH----VYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGD------NNSNIKL 216 (454)
Q Consensus 148 ~~~s~~~~~----l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~------~dg~v~v 216 (454)
++++|.+.. |++++.|+.|..+|..+++............. ..+.+ -.+. ++ .+++++ .+|.|+.
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~--~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A 186 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKVG--STLTIAPYVV-KD-KVIIGSSGAELGVRGYLTA 186 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT--CBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCcc--ceeecCCEEE-CC-EEEEEecccccCCCCeEEE
Confidence 345444444 88888999999999999988766543110000 01111 1111 44 455554 3789999
Q ss_pred EeC-CCccEEeecccCCC-------------------------------------e-EEEEEcCCCCEEEEEeCC-----
Q psy17902 217 WSS-SLEHLHTFTGHKAP-------------------------------------I-TGLAISFECDTLYSSSND----- 252 (454)
Q Consensus 217 w~~-~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~~d----- 252 (454)
+|. +++.+..+...... + ..+++.+...+++.++.+
T Consensus 187 ~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~ 266 (599)
T 1w6s_A 187 YDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWN 266 (599)
T ss_dssp EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred EECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcccc
Confidence 999 67777665432111 0 134566777788877665
Q ss_pred -----------CcEEEEeCCCceeEEEeeccCC----------ceeEEEee-cCC---CEEEEeeCCCcEEEeeccCCeE
Q psy17902 253 -----------RSIKVWNIEDRAYVETLFGHQS----------AITSLDIL-AKN---RVISSGGTDKSVRVWKIQEESQ 307 (454)
Q Consensus 253 -----------g~i~iwd~~~~~~~~~~~~~~~----------~v~~~~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~ 307 (454)
+.|..+|..+++.+..+..... ++. +... .+| ..++.++.+|.++++|..+++.
T Consensus 267 ~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 267 ETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp GGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred CcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 3799999999998877654221 121 2222 456 5677788999999999999887
Q ss_pred E-EEccc-------------cCCe---------------------------EEEEecCCCEEEEE---------------
Q psy17902 308 L-VFNGH-------------SRGI---------------------------DMTRRVNDQQFITC--------------- 331 (454)
Q Consensus 308 ~-~~~~~-------------~~~i---------------------------~~~~~~~~~~l~~~--------------- 331 (454)
+ ..... ..++ .....+..+++++.
T Consensus 346 lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~ 425 (599)
T 1w6s_A 346 VSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPY 425 (599)
T ss_dssp EEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCC
T ss_pred eecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccc
Confidence 7 22110 0000 00111111222111
Q ss_pred ------------------e------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902 332 ------------------G------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC 387 (454)
Q Consensus 332 ------------------~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 387 (454)
+ ..|.|..||+.+++.+...+.... ...-.+...+.+++.++.||.
T Consensus 426 ~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~----------~~~g~~~tagg~vf~gt~dg~ 495 (599)
T 1w6s_A 426 KAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFA----------VWGGTMATAGDLVFYGTLDGY 495 (599)
T ss_dssp CTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSC----------CCSBCEEETTTEEEEECTTSE
T ss_pred cCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCC----------ccCcceEecCCEEEEECCCCe
Confidence 1 357899999999988887764321 111112235668888999999
Q ss_pred EEEEEcCCCceeeEeccCCCceeeeEEEEcCCCC-EEEEEecCCC
Q psy17902 388 VKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHK-HLVAGIGTEH 431 (454)
Q Consensus 388 v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~-~l~~~~~~d~ 431 (454)
|+.||..+|+.+-.+... ......-+.+..+|+ |+++..|..+
T Consensus 496 l~A~D~~tG~~lW~~~l~-~g~~~~P~~y~~~G~qyv~~~~G~g~ 539 (599)
T 1w6s_A 496 LKARDSDTGDLLWKFKIP-SGAIGYPMTYTHKGTQYVAIYYGVGG 539 (599)
T ss_dssp EEEEETTTCCEEEEEECS-SCCCSCCEEEEETTEEEEEEEECCCT
T ss_pred EEEEECCCCCEEEEeeCC-CCcEeccEEEEeCCEEEEEEEccCCc
Confidence 999999999988777542 222233466677887 4555545433
No 258
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.00 E-value=1.6e-06 Score=87.78 Aligned_cols=282 Identities=10% Similarity=0.014 Sum_probs=174.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCc---ccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV---KTDRKSYPPILALAVANNNELVASGDNNSNIKLW 217 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw 217 (454)
....|.++...++|+ |..|+.++-|..|+..+.......... .........|.++...++|. |..|+.++-|.+|
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~ 388 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVF 388 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEE
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEE
Confidence 346799999988875 666777777888887654332211000 00111335699999888876 4455655668888
Q ss_pred eCCCccEEee----cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEEEe
Q psy17902 218 SSSLEHLHTF----TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 218 ~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 291 (454)
+........+ ......|.++...+++. |..|+.++-|..++..+++...... .....|.++...+++.+.+ |
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-g 466 (781)
T 3v9f_A 389 ENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI-G 466 (781)
T ss_dssp ETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE-E
T ss_pred ECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE-E
Confidence 8754433332 12346788888877765 5567776779999988776433221 1346788998887776544 5
Q ss_pred eCCCcEEEeeccCCeEEEEccc------cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCC
Q psy17902 292 GTDKSVRVWKIQEESQLVFNGH------SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPN 365 (454)
Q Consensus 292 ~~dg~i~i~d~~~~~~~~~~~~------~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 365 (454)
+. +.|.+||..++....+... ...+.++.....+.|..|+..+-|..||..+.... .+....+. ...
T Consensus 467 t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~l-----~~~ 539 (781)
T 3v9f_A 467 TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVR-KFNQYEGF-----CSN 539 (781)
T ss_dssp ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEE-EECTTTTC-----SCS
T ss_pred EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEE-EccCCCCC-----CCC
Confidence 55 5688999887655433221 24566666666667777887555888987665432 22221111 234
Q ss_pred cEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccC--CCceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 366 WITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI--PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~--~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
.|.++...++|.+.++.. +|.|..||..+++. ..+... -....|.++...++|...+++ ..| |..++.
T Consensus 540 ~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~G-l~~~~~ 609 (781)
T 3v9f_A 540 TINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGNIWAST--NTG-ISCYIT 609 (781)
T ss_dssp CEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSCEEEEC--SSC-EEEEET
T ss_pred eeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCCEEEEc--CCc-eEEEEC
Confidence 599999999988655544 67558888776543 222211 123458899999988876654 333 555543
No 259
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.00 E-value=1.6e-07 Score=90.92 Aligned_cols=257 Identities=9% Similarity=0.029 Sum_probs=156.2
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEE-EEEeCCCcEEEEecC------CCcEEEEeC-CCccEE
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILA-LAVANNNELVASGDN------NSNIKLWSS-SLEHLH 225 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~------dg~v~vw~~-~~~~~~ 225 (454)
+..|++++.|+.|..+|..+++............. ..+.+ .... ++ .+++++. +|.|..+|. +++.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~--~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 190 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVG--STLTQAPFVA-KD-TVLMGCSGAELGVRGAVNAFDLKTGELKW 190 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT--CBCCSCCEEE-TT-EEEEECBCGGGTCCCEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCcc--ceeccCCEEE-CC-EEEEEecCCccCCCCEEEEEECCCCcEEE
Confidence 46788888999999999999988766543211000 01110 1111 44 4555543 789999999 677776
Q ss_pred eecccCCC--------------------------------------eEEEEEcCCCCEEEEEeCC---------------
Q psy17902 226 TFTGHKAP--------------------------------------ITGLAISFECDTLYSSSND--------------- 252 (454)
Q Consensus 226 ~~~~~~~~--------------------------------------v~~~~~~~~~~~l~~~~~d--------------- 252 (454)
.+...... ...+++.+....++.++.+
T Consensus 191 ~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y 270 (571)
T 2ad6_A 191 RAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKW 270 (571)
T ss_dssp EEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTT
T ss_pred EEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCcee
Confidence 65432110 0235666766677766532
Q ss_pred -CcEEEEeCCCceeEEEeecc--C--------CceeEEEeecCCC---EEEEeeCCCcEEEeeccCCeEE-EEcccc---
Q psy17902 253 -RSIKVWNIEDRAYVETLFGH--Q--------SAITSLDILAKNR---VISSGGTDKSVRVWKIQEESQL-VFNGHS--- 314 (454)
Q Consensus 253 -g~i~iwd~~~~~~~~~~~~~--~--------~~v~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~-~~~~~~--- 314 (454)
+.|..+|..+++.+..+... . .++. +....+|+ .++.++.+|.++++|..+++.+ ......
T Consensus 271 ~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~ 349 (571)
T 2ad6_A 271 TMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVN 349 (571)
T ss_dssp TTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCC
T ss_pred EEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcc
Confidence 35999999999988776532 1 2221 22224673 5777889999999999998876 221110
Q ss_pred ----------CCe---------------------------EEEEecCCCEEEEEe-------------------------
Q psy17902 315 ----------RGI---------------------------DMTRRVNDQQFITCG------------------------- 332 (454)
Q Consensus 315 ----------~~i---------------------------~~~~~~~~~~l~~~~------------------------- 332 (454)
.++ .....+...++++.+
T Consensus 350 w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 350 VFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp SEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred ccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccc
Confidence 000 011222334444432
Q ss_pred ------------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceee
Q psy17902 333 ------------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE 400 (454)
Q Consensus 333 ------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~ 400 (454)
.+|.|..||+.+++.+..+..... +....+...+.++++++.||.|+.||..+++.+.
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~----------~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw 499 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA----------AWGGTLYTKGGLVWYATLDGYLKALDNKDGKELW 499 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC----------CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred eeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC----------ccceeEEECCCEEEEEcCCCeEEEEECCCCCEEE
Confidence 357899999999988887764321 1122223356678889999999999999999887
Q ss_pred EeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 401 FLQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 401 ~~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
.+... ....-..+.+..+|+.+++.
T Consensus 500 ~~~~~-~~~~~~p~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 500 NFKMP-SGGIGSPMTYSFKGKQYIGS 524 (571)
T ss_dssp EEECS-SCCCSCCEEEEETTEEEEEE
T ss_pred EEeCC-CCcEeeeEEEEECCEEEEEE
Confidence 77642 11112234566788765544
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.99 E-value=5.4e-07 Score=75.50 Aligned_cols=186 Identities=12% Similarity=0.117 Sum_probs=126.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEEeeccCCc-eeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE
Q psy17902 232 APITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVETLFGHQSA-ITSLDILAKNRVISSGGTDKSVRVWKIQEESQL 308 (454)
Q Consensus 232 ~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 308 (454)
.....+.|++ +.++.+.+.+| .|+.+|+.+++.+..+...... --.+++. .+.+....-.++.+.+||..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEE
Confidence 3466899986 55556666654 8999999999998877533222 1234443 2344444557899999999998887
Q ss_pred -EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902 309 -VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC 387 (454)
Q Consensus 309 -~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 387 (454)
.+.....+.. +. .++..|+++..++.|.++|..+.+.+.++....... .-..++.+.+. +|.+.+..-.+..
T Consensus 99 ~ti~~~~~Gwg-lt-~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~----~~~~lNeLe~~-~G~lyanvw~s~~ 171 (243)
T 3mbr_X 99 ARFRYPGEGWA-LT-SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGR----PLDNLNELEWV-NGELLANVWLTSR 171 (243)
T ss_dssp EEEECSSCCCE-EE-ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTE----ECCCEEEEEEE-TTEEEEEETTTTE
T ss_pred EEEeCCCCceE-Ee-eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCc----ccccceeeEEe-CCEEEEEECCCCe
Confidence 3333333332 22 345566666668899999999999888887643110 01226667766 6766666656779
Q ss_pred EEEEEcCCCceeeEeccC-----------CCceeeeEEEEcCCCCEEEEE
Q psy17902 388 VKLWKITPKRTLEFLQDI-----------PLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 388 v~iwd~~~~~~~~~~~~~-----------~~~~~v~~l~~s~d~~~l~~~ 426 (454)
|.+.|..+++.+..+... +.....+.|+++|+++.|+++
T Consensus 172 I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 172 IARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred EEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 999999999888877632 122457899999998888877
No 261
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.98 E-value=1.9e-07 Score=78.94 Aligned_cols=188 Identities=12% Similarity=0.016 Sum_probs=124.6
Q ss_pred ceEEEEEeCCCcEEEEecCCC--cEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEE
Q psy17902 192 PILALAVANNNELVASGDNNS--NIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVE 267 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg--~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~ 267 (454)
-...+.|+ ++.++.+++.+| .|+++|+ +++.+..+... .........++++.|+... .++.+.+||..+.+.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 45788998 677677776665 8999999 66666666533 3444433333455666655 48899999999999998
Q ss_pred EeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEcc----cc-CCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902 268 TLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNG----HS-RGIDMTRRVNDQQFITCGEDGTLSLWS 341 (454)
Q Consensus 268 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~----~~-~~i~~~~~~~~~~l~~~~~dg~i~iwd 341 (454)
++.... .-..++ +++..|+.+..++.|.++|..+.+.. ...- .. ..++-+.+.++..++..-.++.|.+.|
T Consensus 122 ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 122 SFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEEC
T ss_pred EEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEE
Confidence 886432 223344 56777776666788999999988776 2111 11 223345555665444444788999999
Q ss_pred cCCCccceeeecccCCCC---CCCCCCcEEEEEEecCCCEEEEecC
Q psy17902 342 ILKKVPTHTIPVAHGYDS---SSSEPNWITSVACLHNSDLVASGSY 384 (454)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~~~s~~~~~l~~~~~ 384 (454)
..+++.+..+........ ........+.|+|+|+++.|++.+.
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999999998886432111 1112345899999998876665554
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.98 E-value=4.1e-07 Score=81.66 Aligned_cols=235 Identities=9% Similarity=-0.009 Sum_probs=144.6
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecc--------------------cCCCeEEEEEcCCCCEEEEEeC
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTG--------------------HKAPITGLAISFECDTLYSSSN 251 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~--------------------~~~~v~~~~~~~~~~~l~~~~~ 251 (454)
...+++|.+++++++++..++.|..|+..+..+..+.. ....+.++++.++...|+++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 45568899999878888888999999986544443321 1135788999973345666655
Q ss_pred CCcEEEEeCCCceeEEEeec-----cCCceeEEEeec-CCCEEEEeeC-----------------CCcEEEeeccCCeEE
Q psy17902 252 DRSIKVWNIEDRAYVETLFG-----HQSAITSLDILA-KNRVISSGGT-----------------DKSVRVWKIQEESQL 308 (454)
Q Consensus 252 dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------dg~i~i~d~~~~~~~ 308 (454)
.+.|..+|..++... .+.. .......+++.+ +|++.++-.. ++.|..||..++...
T Consensus 100 ~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 566889998765432 2211 113467899999 8887765432 367888888766654
Q ss_pred EEccc-cCCeEEEEecCCCEEEEE-eCCCCEEEEecCCCcc--ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecC
Q psy17902 309 VFNGH-SRGIDMTRRVNDQQFITC-GEDGTLSLWSILKKVP--THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY 384 (454)
Q Consensus 309 ~~~~~-~~~i~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~ 384 (454)
.+... ..+......++++.|+.+ +..+.|.+|++..... ...+. . . .. ...++++++|++.++...
T Consensus 179 ~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~--~-~------~g-P~gi~~d~~G~l~va~~~ 248 (322)
T 2fp8_A 179 LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV--K-I------PN-PGNIKRNADGHFWVSSSE 248 (322)
T ss_dssp EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE--E-C------SS-EEEEEECTTSCEEEEEEE
T ss_pred EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE--e-C------CC-CCCeEECCCCCEEEEecC
Confidence 32222 222233344455655544 5678999999875321 11111 0 0 12 677999999986666544
Q ss_pred ----------CCcEEEEEcCCCceeeEeccCCC--ceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 385 ----------DGCVKLWKITPKRTLEFLQDIPL--SGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 385 ----------dg~v~iwd~~~~~~~~~~~~~~~--~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
.+.|..++.. ++.+..+..... ...++++++. + ..|+++....+.|.+++...
T Consensus 249 ~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 249 ELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp ETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECSSCSEEEEEEC--
T ss_pred cccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-C-CEEEEeecCCCceEEEeccc
Confidence 4668888864 666666654211 2346677773 4 45666646788888887643
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.98 E-value=6.5e-07 Score=75.04 Aligned_cols=189 Identities=11% Similarity=-0.008 Sum_probs=123.7
Q ss_pred CCceEEEEEeCCCcEEEEecCC--CcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCcee
Q psy17902 190 YPPILALAVANNNELVASGDNN--SNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAY 265 (454)
Q Consensus 190 ~~~v~~~~~~~~~~~l~~~~~d--g~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~ 265 (454)
..-...+.|++ +.++.+.+.. +.|+++|+ +++.+..+... ...........++.|+.. -.++.+.+||..+.+.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~-~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~ 97 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP-PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTP 97 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC-CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcE
Confidence 34567899986 5666666654 48999999 66666665432 233333233334555544 4688999999999999
Q ss_pred EEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc--ccc---CCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN--GHS---RGIDMTRRVNDQQFITCGEDGTLSL 339 (454)
Q Consensus 266 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~--~~~---~~i~~~~~~~~~~l~~~~~dg~i~i 339 (454)
+.++.... .-..++ +++..|+.+..++.|.++|..+.+.. ... .+. ..++-+.+.++..++..-.+..|.+
T Consensus 98 ~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~v 174 (243)
T 3mbr_X 98 RARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIAR 174 (243)
T ss_dssp EEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEE
T ss_pred EEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEE
Confidence 98886433 224454 46766666667889999999988776 221 111 2334455556655555547889999
Q ss_pred EecCCCccceeeecccCCCCC----CCCCCcEEEEEEecCCCEEEEec
Q psy17902 340 WSILKKVPTHTIPVAHGYDSS----SSEPNWITSVACLHNSDLVASGS 383 (454)
Q Consensus 340 wd~~~~~~~~~~~~~~~~~~~----~~~~~~i~~~~~s~~~~~l~~~~ 383 (454)
.|..+++.+..+......... .......+.|+++|+++.|++.+
T Consensus 175 IDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 175 IDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp ECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 999999999998866432211 11234589999999877555544
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.91 E-value=1.6e-06 Score=84.11 Aligned_cols=282 Identities=9% Similarity=0.009 Sum_probs=163.0
Q ss_pred CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCC--CCc-eEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecc
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS--YPP-ILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTG 229 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~-v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~ 229 (454)
+..|++++.++.|..+|..+++.+............ ... ...+++ .+..|++++.++.|..+|. +++.+..+..
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 345666666455999999999887765432211000 000 011222 2446777888999999999 7777766543
Q ss_pred cCC----CeE-EEEEcC---CCC-EEEEEe------CCCcEEEEeCCCceeEEEeeccCCce------------------
Q psy17902 230 HKA----PIT-GLAISF---ECD-TLYSSS------NDRSIKVWNIEDRAYVETLFGHQSAI------------------ 276 (454)
Q Consensus 230 ~~~----~v~-~~~~~~---~~~-~l~~~~------~dg~i~iwd~~~~~~~~~~~~~~~~v------------------ 276 (454)
... .+. +-.... +++ .+++++ .+|.|+.+|..+++.+.........+
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 220 111 111111 233 566654 37899999999998876553211000
Q ss_pred -----------------------eEEEeecCCCEEEEeeC--------------------C----CcEEEeeccCCeEE-
Q psy17902 277 -----------------------TSLDILAKNRVISSGGT--------------------D----KSVRVWKIQEESQL- 308 (454)
Q Consensus 277 -----------------------~~~~~~~~~~~l~~~~~--------------------d----g~i~i~d~~~~~~~- 308 (454)
..+++.|...+++.+.. | +.|..+|..+++..
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 13456677777776653 2 58999999999888
Q ss_pred EEcc--cc--------CCeEEEEe--cCC---CEEEEEeCCCCEEEEecCCCccceeeecccCCC---------------
Q psy17902 309 VFNG--HS--------RGIDMTRR--VND---QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD--------------- 358 (454)
Q Consensus 309 ~~~~--~~--------~~i~~~~~--~~~---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------------- 358 (454)
.+.. |. .++ .+.. .++ ..++.++.+|.++++|..+++.+..+.......
T Consensus 306 ~~q~~~~d~wd~~~~~~p~-l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~ 384 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELV-LFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVER 384 (582)
T ss_dssp EEESSTTCCSCCCCCCCCE-EEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEEC
T ss_pred EEeCCCCCcccccCCCCcE-EEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEc
Confidence 3322 21 122 2222 244 367788999999999999999887766532100
Q ss_pred --CCC--------CCCCc-----------EEEEEEecCCCEEEEec---------------------------------C
Q psy17902 359 --SSS--------SEPNW-----------ITSVACLHNSDLVASGS---------------------------------Y 384 (454)
Q Consensus 359 --~~~--------~~~~~-----------i~~~~~s~~~~~l~~~~---------------------------------~ 384 (454)
... ..... -..++++|+..++++.. .
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~ 464 (582)
T 1flg_A 385 EGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDH 464 (582)
T ss_dssp TTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSC
T ss_pred cccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCC
Confidence 000 00000 01356666555444422 3
Q ss_pred CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCCC
Q psy17902 385 DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGV 442 (454)
Q Consensus 385 dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~~ 442 (454)
+|.|..||+.+++.+-..... .++..-.....+..++++ +.|+.|+.||..++.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~---~~~~~g~~~tagglvf~g-~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH---LPLWAGVLATAGNLVFTG-TGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES---SCCCSCCEEETTTEEEEE-CTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecCC---CCCcccceEeCCCEEEEE-CCCCcEEEEECCCCC
Confidence 688999999999876555421 122221222236677777 689999998876654
No 265
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.87 E-value=5.9e-07 Score=75.89 Aligned_cols=186 Identities=9% Similarity=-0.003 Sum_probs=122.7
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEe
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETL 269 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~ 269 (454)
-...+.|+ ++.+..+.+.+|.|+++|+ +++.+..+ -..........+.++.|+.. -.++.+.+||..+.+.+.++
T Consensus 56 ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 45788887 4677778888899999999 66666665 23344332233344444444 46889999999999999888
Q ss_pred eccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEc--cccC---CeEEEEecCCCEEEEEeCCCCEEEEecC
Q psy17902 270 FGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFN--GHSR---GIDMTRRVNDQQFITCGEDGTLSLWSIL 343 (454)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~--~~~~---~i~~~~~~~~~~l~~~~~dg~i~iwd~~ 343 (454)
... ..-..++ +++..|+.+..++.|.++|..+.+.. ... .+.. .++-+.+.++..++....+..|.+.|..
T Consensus 133 ~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 133 RYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp ECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTT
T ss_pred eCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCC
Confidence 643 2224455 46777777777899999999988776 221 1221 2344555666544444468899999999
Q ss_pred CCccceeeecccCCC----CCCCCCCcEEEEEEecCCC-EEEEec
Q psy17902 344 KKVPTHTIPVAHGYD----SSSSEPNWITSVACLHNSD-LVASGS 383 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~s~~~~-~l~~~~ 383 (454)
+++.+..+....... .........+.|+++|+++ +++||-
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999999888652110 0011234589999999766 555553
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.81 E-value=8.4e-06 Score=72.40 Aligned_cols=226 Identities=13% Similarity=0.056 Sum_probs=130.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC--cEEEEeCC
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS--NIKLWSSS 220 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~v~vw~~~ 220 (454)
.....++|+++++++++-..++.|..||.... ....+. ....+..+++.++++++++..... .|..++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-------~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~ 103 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-------VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKS 103 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-------CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-------CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCC
Confidence 56789999999987777667899999988753 222221 123688999999999666554322 46667763
Q ss_pred CccEEeecc--cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-EEEee---------ccCCceeEEEeecCCCEE
Q psy17902 221 LEHLHTFTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY-VETLF---------GHQSAITSLDILAKNRVI 288 (454)
Q Consensus 221 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~-~~~~~---------~~~~~v~~~~~~~~~~~l 288 (454)
...+..+.. .......++..+++..+++-..++.|+++|..++.. +.... ..-...+.| +++++.|
T Consensus 104 ~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~l 181 (306)
T 2p4o_A 104 DGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFL 181 (306)
T ss_dssp TSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEE
T ss_pred CCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEE
Confidence 333332221 222345556555554444444588999999876531 21110 111234555 7787655
Q ss_pred E-EeeCCCcEEEeeccC-CeE---EEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCC
Q psy17902 289 S-SGGTDKSVRVWKIQE-ESQ---LVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363 (454)
Q Consensus 289 ~-~~~~dg~i~i~d~~~-~~~---~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 363 (454)
+ +-...+.|..|++.. +.. ..+.....+-.....++++.+++....+.|.+++.. +...........
T Consensus 182 yv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~------- 253 (306)
T 2p4o_A 182 YVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG------- 253 (306)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT-------
T ss_pred EEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc-------
Confidence 4 445567899999874 221 111111122223334456666666678899999975 433221111111
Q ss_pred CCcEEEEEEe---cCCCEEEEecCCC
Q psy17902 364 PNWITSVACL---HNSDLVASGSYDG 386 (454)
Q Consensus 364 ~~~i~~~~~s---~~~~~l~~~~~dg 386 (454)
....++++|. |+++.|++++..+
T Consensus 254 ~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 254 VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cCCceEEEEecccCCCCEEEEECCCC
Confidence 1238999998 8877666665543
No 267
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.79 E-value=4.2e-06 Score=78.05 Aligned_cols=242 Identities=7% Similarity=0.000 Sum_probs=140.4
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-CC----cEEEE
Q psy17902 144 SITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-NS----NIKLW 217 (454)
Q Consensus 144 ~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg----~v~vw 217 (454)
....|+++| ++..|+++...+.|+.+|+.+........ .......++|++++++|+++.. ++ .+.++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-------~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-------GLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-------CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-------CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 467899998 45667666655889999988765433222 3346889999999996666554 22 34444
Q ss_pred eCCCccE--EeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEee-ccCCceeEEEeecCCCEE-EEee
Q psy17902 218 SSSLEHL--HTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDILAKNRVI-SSGG 292 (454)
Q Consensus 218 ~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~ 292 (454)
+..+... ..+.. ......++++| ++.++++-..++.|..++...+....... +.......|+|+|++++| ++-.
T Consensus 211 ~~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 211 TRESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp EGGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eCCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 4433221 22221 23456788999 66666665567899999998765422222 122346789999999954 4445
Q ss_pred CCCcEEEeeccCC--eE---EEEccc----------------cCCeEEEEec---------CCCEEEEEeCCCCEEEEec
Q psy17902 293 TDKSVRVWKIQEE--SQ---LVFNGH----------------SRGIDMTRRV---------NDQQFITCGEDGTLSLWSI 342 (454)
Q Consensus 293 ~dg~i~i~d~~~~--~~---~~~~~~----------------~~~i~~~~~~---------~~~~l~~~~~dg~i~iwd~ 342 (454)
..+.|..++.... .. ..+.+. ..+...++.. .+..+++-...+.|+.++.
T Consensus 290 ~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~ 369 (430)
T 3tc9_A 290 NQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP 369 (430)
T ss_dssp TTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT
T ss_pred CCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC
Confidence 6788999887642 11 112111 0111123332 1334444456678888883
Q ss_pred CCCccceeeecc----cCC----CCCCCCCCcEEEEEEec-CCCEEEEecCCCcEEEEEcC
Q psy17902 343 LKKVPTHTIPVA----HGY----DSSSSEPNWITSVACLH-NSDLVASGSYDGCVKLWKIT 394 (454)
Q Consensus 343 ~~~~~~~~~~~~----~~~----~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~v~iwd~~ 394 (454)
.+......-.. .+. ......-.....|+++| ++.++++-..++.|+.+++.
T Consensus 370 -~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 370 -QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp -TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred -CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 44322222110 000 00011123588999999 46666666667788888764
No 268
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.76 E-value=6.3e-05 Score=67.99 Aligned_cols=244 Identities=11% Similarity=0.034 Sum_probs=144.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCCcEEEEeC
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNSNIKLWSS 219 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~ 219 (454)
+.+..+|.+..++ .+|+.+.. ..|+..++.......... ....+..++|++....|+.. ...+.|..+++
T Consensus 32 ~~d~~~C~~~~~~-~~ll~~~~-~~I~~i~~~g~~~~~~~~-------~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~ 102 (349)
T 3v64_C 32 RPDRRSCKALGPE-PVLLFANR-IDIRQVLPHRSEYTLLLN-------NLENAIALDFHHRRELVFWSDVTLDRILRANL 102 (349)
T ss_dssp CTTSSCEEESSSC-CEEEEECB-SCEEEECTTSCCEEEEEC-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCcccccccC-ceeEeecc-cceEEEeCCCCeeEEeec-------CCCceEEEEEeccccEEEEEeccCCceEEEec
Confidence 3445567776664 45555443 468888877654433222 23357899999765555544 45788999998
Q ss_pred CCccEEee-cccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCC-C
Q psy17902 220 SLEHLHTF-TGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTD-K 295 (454)
Q Consensus 220 ~~~~~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d-g 295 (454)
.+.....+ .........+++.+.+..| ++-...+.|.+.++........+.........|+++|.+..|+.+ ... +
T Consensus 103 ~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~ 182 (349)
T 3v64_C 103 NGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP 182 (349)
T ss_dssp TSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSC
T ss_pred CCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCC
Confidence 65544333 2233456789998755555 455556789999987554333333334567899999866555444 334 6
Q ss_pred cEEEeeccCCeEEEEcc-ccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE
Q psy17902 296 SVRVWKIQEESQLVFNG-HSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372 (454)
Q Consensus 296 ~i~i~d~~~~~~~~~~~-~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 372 (454)
.|..+++.......+.. .......+.+. .++.|+ +-+..+.|..+++........+... ......+++
T Consensus 183 ~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~---------~~~P~giav 253 (349)
T 3v64_C 183 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---------LPHPFAITV 253 (349)
T ss_dssp EEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS---------CSSEEEEEE
T ss_pred EEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC---------CCCceEEEE
Confidence 78888877644433221 12222334443 455554 4446678999998643222222111 122677888
Q ss_pred ecCCCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902 373 LHNSDLVASGSYDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 373 s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 403 (454)
..+.++++-...+.|..++..++.....+.
T Consensus 254 -~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 254 -FEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp -ETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred -ECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 455566666677889888866665554443
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=5.7e-05 Score=69.32 Aligned_cols=241 Identities=11% Similarity=0.044 Sum_probs=143.4
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCCc
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSLE 222 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~~ 222 (454)
.-+|.+..+ ..+|+.+.. ..|+.+++.......... ....+..++|.+.+..|+ +-...+.|..+++.+.
T Consensus 78 ~~~C~~~~~-~~~l~~~~~-~~I~~i~~~~~~~~~~~~-------~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~ 148 (386)
T 3v65_B 78 RRSCKALGP-EPVLLFANR-IDIRQVLPHRSEYTLLLN-------NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 148 (386)
T ss_dssp SSCEEECSS-CCEEEEECB-SCEEEECTTSCCCEEEEC-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCeECCccc-cceeEeecC-ccceeeccCCCcEEEEec-------CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 345666555 345554443 568888887654433222 234588999997555454 4455788999999665
Q ss_pred cEEee-cccCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee-CC-CcEE
Q psy17902 223 HLHTF-TGHKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG-TD-KSVR 298 (454)
Q Consensus 223 ~~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-g~i~ 298 (454)
....+ .........+++.+.+..| ++-...+.|.+.++........+.........|+++|.+..|+.+. .. +.|.
T Consensus 149 ~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~ 228 (386)
T 3v65_B 149 NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIE 228 (386)
T ss_dssp CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEE
T ss_pred CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEE
Confidence 54443 2223355778898755555 4445567899999875443333333335678999998776555444 33 6788
Q ss_pred EeeccCCeEEEEc-cccCCeEEEEe-cCCCEE-EEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902 299 VWKIQEESQLVFN-GHSRGIDMTRR-VNDQQF-ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375 (454)
Q Consensus 299 i~d~~~~~~~~~~-~~~~~i~~~~~-~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 375 (454)
.+++.......+. ........+.+ +.++.| ++-+..+.|..+++........+... ......|++ ..
T Consensus 229 r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~---------~~~P~giav-~~ 298 (386)
T 3v65_B 229 ASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG---------LPHPFAITV-FE 298 (386)
T ss_dssp EEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS---------CSSEEEEEE-ET
T ss_pred EEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC---------CCCceEEEE-EC
Confidence 8887764443322 22222233444 345544 45556778999998643222222111 122677888 45
Q ss_pred CCEEEEecCCCcEEEEEcCCCceeeEec
Q psy17902 376 SDLVASGSYDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 376 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 403 (454)
+.++++-...+.|..++..++.....+.
T Consensus 299 ~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 299 DSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 5566666678889999876776665554
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.71 E-value=2.4e-06 Score=85.91 Aligned_cols=191 Identities=5% Similarity=-0.011 Sum_probs=111.5
Q ss_pred CeEEEEEc-CCCCEEEEEeC-CC----eEEEEEcCCC-ceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----
Q psy17902 144 SITCIAVT-SDSKHVYSACK-DG----IIIKWLLETR-SKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN----- 211 (454)
Q Consensus 144 ~V~~~~~s-~~~~~l~~~~~-dg----~i~iwd~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 211 (454)
.+...+|| |||++||.+.. +| .|+++|+.++ ..+.. .+ ......++|+|||+.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~-------~~~~~~~~WspDg~~l~y~~~d~~~~~ 246 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV-------SGTNGEIVWGPDHTSLFYVTKDETLRE 246 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE-------EEECSCCEECSSTTEEEEEEECTTCCE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc-------cCceeeEEEecCCCEEEEEEECCCCCC
Confidence 67889999 99998886543 23 5999999987 53211 00 1123468899999888777654
Q ss_pred CcEEEEeCCCcc---EEeec-ccCCCeEEEEEcCCCCEEEEEeC---CCcEEEEeCCCc--ee-EEEe-eccCCceeEEE
Q psy17902 212 SNIKLWSSSLEH---LHTFT-GHKAPITGLAISFECDTLYSSSN---DRSIKVWNIEDR--AY-VETL-FGHQSAITSLD 280 (454)
Q Consensus 212 g~v~vw~~~~~~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~--~~-~~~~-~~~~~~v~~~~ 280 (454)
..|.++++.+.. ...+. ........+.|+|||++|+..+. ...|+++|+.++ .. +..+ ........++.
T Consensus 247 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 247 NKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred CEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 257778884321 22322 23345678899999998887653 346888999875 22 1233 33444556666
Q ss_pred eecCCCEEEEeeCC----CcEEEeeccCC-eEEE-EccccC--CeEEEEecCCCEEEEEeCCCCE--EEEec
Q psy17902 281 ILAKNRVISSGGTD----KSVRVWKIQEE-SQLV-FNGHSR--GIDMTRRVNDQQFITCGEDGTL--SLWSI 342 (454)
Q Consensus 281 ~~~~~~~l~~~~~d----g~i~i~d~~~~-~~~~-~~~~~~--~i~~~~~~~~~~l~~~~~dg~i--~iwd~ 342 (454)
|+..+.+++.+..+ ..|..+++.++ .... +..+.. .+..+.+..+..+++...++.. .++++
T Consensus 327 ~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 327 MHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 55444444554443 35666776642 2112 222332 2333344444455566677754 45554
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=1e-05 Score=75.46 Aligned_cols=245 Identities=8% Similarity=0.044 Sum_probs=142.3
Q ss_pred CceEEEEEeC-CCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC-C----cEEEEeCCCce
Q psy17902 191 PPILALAVAN-NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND-R----SIKVWNIEDRA 264 (454)
Q Consensus 191 ~~v~~~~~~~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g----~i~iwd~~~~~ 264 (454)
.....|+++| ++..|+++...+.|+.+|+.+..+..+.........++|++++++|+++... + .+.+++.. +.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE-SG 215 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-GT
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-Cc
Confidence 3567899998 4555666655588999999776666665556678899999999967666542 2 34444432 32
Q ss_pred eE--EEeeccCCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCeEEEEc---cccCCeEEEEecCCCEE-EEEeCCCCE
Q psy17902 265 YV--ETLFGHQSAITSLDILA-KNRVISSGGTDKSVRVWKIQEESQLVFN---GHSRGIDMTRRVNDQQF-ITCGEDGTL 337 (454)
Q Consensus 265 ~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~i~~~~~~~~~~l-~~~~~dg~i 337 (454)
.. ..+. .......++++| ++.++++-..++.|..|+........+. ....+....+.+++++| ++-...+.|
T Consensus 216 ~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 21 2222 123457788999 6776666667789999999876653221 11224445555667744 455577889
Q ss_pred EEEecCCC--cc--ceeeecccCCCCC------CCCCCcEE-EEEEe--------cCCCEEEEecCCCcEEEEEcCCCce
Q psy17902 338 SLWSILKK--VP--THTIPVAHGYDSS------SSEPNWIT-SVACL--------HNSDLVASGSYDGCVKLWKITPKRT 398 (454)
Q Consensus 338 ~iwd~~~~--~~--~~~~~~~~~~~~~------~~~~~~i~-~~~~s--------~~~~~l~~~~~dg~v~iwd~~~~~~ 398 (454)
..++.... .. ...+....+.... ...-.... .++.. ++|.+.++-...+.|+.++ ..+..
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 99876532 11 1122111000000 00011133 45553 3466666666678899888 34543
Q ss_pred eeEecc----CCC--c---------eeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 399 LEFLQD----IPL--S---------GVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 399 ~~~~~~----~~~--~---------~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
...... ... . .....|+++|++..|+++-..+++|+.++.
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 332221 000 1 147899999965666666466777777654
No 272
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.67 E-value=0.00012 Score=66.25 Aligned_cols=233 Identities=7% Similarity=-0.034 Sum_probs=136.2
Q ss_pred EEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeecc
Q psy17902 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGH 272 (454)
Q Consensus 194 ~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~ 272 (454)
.|.+..++. +|+.+. ...|+..++.+.....+......+..++|++....|+.+. ..+.|..+++........+...
T Consensus 37 ~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 114 (349)
T 3v64_C 37 SCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 114 (349)
T ss_dssp CEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS
T ss_pred cccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCC
Confidence 344444533 444443 3468888886655555444445688999998666666554 5788999998866543333323
Q ss_pred CCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEE-Eccc-cCCeEEEEecCCCEEE-EEeCC-CCEEEEecCCCcc
Q psy17902 273 QSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLV-FNGH-SRGIDMTRRVNDQQFI-TCGED-GTLSLWSILKKVP 347 (454)
Q Consensus 273 ~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~-~~~~-~~~i~~~~~~~~~~l~-~~~~d-g~i~iwd~~~~~~ 347 (454)
......+++.+.+ +++++-...+.|.+.++....... .... ..+...+..+.++.|+ +-... +.|..+++.....
T Consensus 115 ~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 194 (349)
T 3v64_C 115 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 194 (349)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc
Confidence 3445789998755 455555567789999987654332 2222 2233333344455444 44444 7788888754322
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
..+.. . .-.+...|+++|++..|+.+ +..+.|..+++........+.. .......|++. +..|+.+
T Consensus 195 -~~~~~-~-------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~--~~~~P~giav~--~~~ly~t 261 (349)
T 3v64_C 195 -RIIAD-T-------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPFAITVF--EDSLYWT 261 (349)
T ss_dssp -EESCC-S-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEEE--TTEEEEE
T ss_pred -EEEEE-C-------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeC--CCCCceEEEEE--CCEEEEe
Confidence 22110 1 12347899999866655444 4567899999875433322322 23446677773 3456666
Q ss_pred ecCCCceeeeeeeCC
Q psy17902 427 IGTEHRFGRWKTIKG 441 (454)
Q Consensus 427 ~~~d~~i~~W~~~~~ 441 (454)
-...+.|...+...+
T Consensus 262 d~~~~~V~~~~~~~G 276 (349)
T 3v64_C 262 DWHTKSINSANKFTG 276 (349)
T ss_dssp ETTTTEEEEEETTTC
T ss_pred cCCCCeEEEEEccCC
Confidence 466777877764444
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.65 E-value=4.1e-05 Score=65.10 Aligned_cols=200 Identities=11% Similarity=0.144 Sum_probs=127.1
Q ss_pred eEeccCCCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCC
Q psy17902 134 TKFNGKPHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS 212 (454)
Q Consensus 134 ~~~~~~~h~~~V~~~~~s~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 212 (454)
+.+.| -.+.+..++|+|+++.|+ +...++.|...|.. +.....+++ ......-.|++.+++.++++.-.++
T Consensus 20 ~~l~g--~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-----~g~~D~EGIa~~~~g~~~vs~E~~~ 91 (255)
T 3qqz_A 20 KEIAG--ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-----DFVKDLETIEYIGDNQFVISDERDY 91 (255)
T ss_dssp EECTT--CCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-----SSCSSEEEEEECSTTEEEEEETTTT
T ss_pred eECCC--cccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-----CCCCChHHeEEeCCCEEEEEECCCC
Confidence 45666 556799999999876555 46778899999998 777666654 2234677889999998877766778
Q ss_pred cEEEEeC--CCc--cEEeec------ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---CceeEEEee-------cc
Q psy17902 213 NIKLWSS--SLE--HLHTFT------GHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DRAYVETLF-------GH 272 (454)
Q Consensus 213 ~v~vw~~--~~~--~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~-------~~ 272 (454)
.+.++++ .+. .+.... ..+.....|+|+|.++.|+++.......+|.+. ....+..+. .+
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred cEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccc
Confidence 8999987 222 112221 234557899999999888887766555555543 111112111 13
Q ss_pred CCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEEEEcccc---------CCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902 273 QSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQLVFNGHS---------RGIDMTRRVNDQQFITCGEDGTLSLWS 341 (454)
Q Consensus 273 ~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---------~~i~~~~~~~~~~l~~~~~dg~i~iwd 341 (454)
...+.+++++|.. .+++.......|.++|........+.-.. ..-.-+.+.+.+.|+..+.-+.+++|.
T Consensus 172 ~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~ 250 (255)
T 3qqz_A 172 LDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFT 250 (255)
T ss_dssp SSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEE
T ss_pred cCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEE
Confidence 3457899999875 45566667788899997755222221111 122445555444466667766666664
No 274
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.63 E-value=0.00018 Score=62.26 Aligned_cols=257 Identities=9% Similarity=0.118 Sum_probs=155.6
Q ss_pred CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCc-cEEeecccCCCeEEEEEcCC
Q psy17902 164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLE-HLHTFTGHKAPITGLAISFE 242 (454)
Q Consensus 164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~-~~~~~~~~~~~v~~~~~~~~ 242 (454)
..|.|.|+.+.......+. ..-+.-.+|..+.||.-. ...+.|+|+..+ .+..+. ....|.-=.|-.+
T Consensus 49 ~~VvIiDl~n~~~~~Rrpi---------~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~-~~e~VvfWkWis~ 117 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRPI---------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL 117 (365)
T ss_dssp EEEEEEETTSTTSCEEEEC---------CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS
T ss_pred CEEEEEECCCCCCcccccc---------ccceeeeCCCccEEEEec-CCeEEEechHHhhhhccee-cCCccEEEEecCC
Confidence 4788999988665433222 222344688888777765 578999999554 444444 3456666667543
Q ss_pred CCEEEEEeCCCcEEEEeCCCc-eeEEEeecc----CCceeEEEeecCCCEEEEeeC-------CCcEEEeeccCCeEEEE
Q psy17902 243 CDTLYSSSNDRSIKVWNIEDR-AYVETLFGH----QSAITSLDILAKNRVISSGGT-------DKSVRVWKIQEESQLVF 310 (454)
Q Consensus 243 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~ 310 (454)
+.|+..+. ..|+.|++... .++..+..| ...|..-..+++.++++..+- .|.+.+|+...+....+
T Consensus 118 -~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i 195 (365)
T 2xzh_A 118 -NTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI 195 (365)
T ss_dssp -SEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEE
T ss_pred -CeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccccccee
Confidence 45555543 66999999743 444555443 345666777788887765442 46789999998888888
Q ss_pred ccccCCeEEEEecCC----CEEEEEeC---CCCEEEEecCCC---ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902 311 NGHSRGIDMTRRVND----QQFITCGE---DGTLSLWSILKK---VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380 (454)
Q Consensus 311 ~~~~~~i~~~~~~~~----~~l~~~~~---dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 380 (454)
.+|......+..... ..|+.+.. .+.++|.++... .+........-.-..........++..|+.-.+++
T Consensus 196 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviy 275 (365)
T 2xzh_A 196 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 275 (365)
T ss_dssp CCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEE
Confidence 888766544433321 22333322 268889888442 11111110000011112345577889998888899
Q ss_pred EecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902 381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW 436 (454)
Q Consensus 381 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W 436 (454)
.-+.-|.|++||+.++.++..-+- ...+|...+-+....-+++- ...|.|..-
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrI--S~d~iF~ta~~~~~~Gi~~V-nr~GqVl~v 328 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAGIIGV-NRKGQVLSV 328 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEEGGGTEEEEE-ETTCEEEEE
T ss_pred EEeCCcEEEEEEcccCcEEEEecc--CCCceEEecccCCCCcEEEE-cCCCEEEEE
Confidence 999999999999999988876554 33444444443333333333 355555433
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.63 E-value=3.6e-05 Score=71.69 Aligned_cols=244 Identities=7% Similarity=-0.031 Sum_probs=139.3
Q ss_pred CceEEEEEeCC--CcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCc
Q psy17902 191 PPILALAVANN--NELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDR 263 (454)
Q Consensus 191 ~~v~~~~~~~~--~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~ 263 (454)
.....++|+|+ ...|+.+...+.|+.++.....+..+........+++|+++++ |+.+...+ .+...+...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 45678999984 3445555444899999996566666655556789999999999 55554322 2333333221
Q ss_pred ee-EEEeeccCCceeEEEeec-CCCEEEEeeCCCcEEEeeccCCeE-EEE-c-cc-cCCeEEEEecCCCEE-EEEeCCCC
Q psy17902 264 AY-VETLFGHQSAITSLDILA-KNRVISSGGTDKSVRVWKIQEESQ-LVF-N-GH-SRGIDMTRRVNDQQF-ITCGEDGT 336 (454)
Q Consensus 264 ~~-~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~-~~~-~-~~-~~~i~~~~~~~~~~l-~~~~~dg~ 336 (454)
.. ...+. .......++++| ++.++++-..++.|+.++..++.. ..+ . +. .......+.++++.| ++-...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 01111 223456788999 666666655678899999986665 221 1 11 112234445566644 45556788
Q ss_pred EEEEecCC--Cccc--eeeecccCCCCC------CCCCCcEEEEEE---------ecCCCEEEEecCCCcEEEEEcCCCc
Q psy17902 337 LSLWSILK--KVPT--HTIPVAHGYDSS------SSEPNWITSVAC---------LHNSDLVASGSYDGCVKLWKITPKR 397 (454)
Q Consensus 337 i~iwd~~~--~~~~--~~~~~~~~~~~~------~~~~~~i~~~~~---------s~~~~~l~~~~~dg~v~iwd~~~~~ 397 (454)
|+.+++.. +... ..+....+.... ...-.....+++ .++|.+.++-...+.|+.++. ++.
T Consensus 297 I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 297 IYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp EEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred EEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 99987652 2211 111111010000 011233678999 677777777777889999985 453
Q ss_pred eeeEeccCCC----------------ceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 398 TLEFLQDIPL----------------SGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 398 ~~~~~~~~~~----------------~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
.. .+.+... -.....|+++|....|+++-..+++|+.++.
T Consensus 376 v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 376 VT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 33 3322110 1236789999544455555456777777654
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.62 E-value=2.2e-06 Score=84.84 Aligned_cols=233 Identities=10% Similarity=0.124 Sum_probs=129.9
Q ss_pred EEEEeC-CCcEEEEecCCC-----------cEEEEeCCCc---cEEeec-ccCCCeEEEEEcCCCCEEEEEeC-CCcEEE
Q psy17902 195 ALAVAN-NNELVASGDNNS-----------NIKLWSSSLE---HLHTFT-GHKAPITGLAISFECDTLYSSSN-DRSIKV 257 (454)
Q Consensus 195 ~~~~~~-~~~~l~~~~~dg-----------~v~vw~~~~~---~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-dg~i~i 257 (454)
.+++.+ ++++++.|+.+. .+.+||.... .+..+. .+.....++++..++.++++|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 566777 888888887542 5788998332 222222 23333445778889999999984 458999
Q ss_pred EeCCCceeEEEeeccCC-ceeEEEeecCCCEEEEee-CC-----CcEEEeeccCCeEEEEccc-----c-CCeEEEEecC
Q psy17902 258 WNIEDRAYVETLFGHQS-AITSLDILAKNRVISSGG-TD-----KSVRVWKIQEESQLVFNGH-----S-RGIDMTRRVN 324 (454)
Q Consensus 258 wd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~-~d-----g~i~i~d~~~~~~~~~~~~-----~-~~i~~~~~~~ 324 (454)
||..+.+....-..+.. .-.+++..+++++++.|+ .+ ..+.+||..+......... . .....+...+
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~ 349 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSD 349 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecC
Confidence 99987654332111111 123455667899999888 34 5689999988765543210 0 0000111123
Q ss_pred CCEEEEEeCCC---------CEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEec-CCCEEEEecCCC--------
Q psy17902 325 DQQFITCGEDG---------TLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLH-NSDLVASGSYDG-------- 386 (454)
Q Consensus 325 ~~~l~~~~~dg---------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg-------- 386 (454)
+..++.++.+| .+..||..+..-...................-.++.|.. ++++++.|+.++
T Consensus 350 ~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~ 429 (656)
T 1k3i_A 350 NHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATT 429 (656)
T ss_dssp CSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCC
T ss_pred CceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCC
Confidence 44455555444 467788766543322211110000000011134455543 677888887543
Q ss_pred ---cEEEEEcCCCceeeEe-ccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902 387 ---CVKLWKITPKRTLEFL-QDIPLSGVINSLVFTSDHKHLVAGI 427 (454)
Q Consensus 387 ---~v~iwd~~~~~~~~~~-~~~~~~~~v~~l~~s~d~~~l~~~~ 427 (454)
.|.+||..+....... ..++....-.+++..|+|+.+++++
T Consensus 430 ~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG 474 (656)
T 1k3i_A 430 NAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGG 474 (656)
T ss_dssp CEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECC
T ss_pred cceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECC
Confidence 6788887766443332 1222333334567788999998883
No 277
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.62 E-value=2.2e-05 Score=73.20 Aligned_cols=242 Identities=9% Similarity=0.017 Sum_probs=137.8
Q ss_pred CCeEEEEEcCC--CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC---C-cEEE
Q psy17902 143 ASITCIAVTSD--SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN---S-NIKL 216 (454)
Q Consensus 143 ~~V~~~~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g-~v~v 216 (454)
.....|+|+|+ ...|+.+...+.|+.++..++....... .......++++++|+++++.... . .+..
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-------~~~~P~giavd~dG~lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-------NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-------CCSCEEEEEECTTCCEEEEECCSCTTSEEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-------CCCCccEEEECCCCCEEEEcCCCCcccceEEE
Confidence 34678999984 4456655544899999987766544322 33468899999999944444321 1 2333
Q ss_pred EeCCCccE--EeecccCCCeEEEEEcC-CCCEEEEEeCCCcEEEEeCCCceeEEEee--ccCCceeEEEeecCCCEEE-E
Q psy17902 217 WSSSLEHL--HTFTGHKAPITGLAISF-ECDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVIS-S 290 (454)
Q Consensus 217 w~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~-~ 290 (454)
.+..+... ..+. .-.....++++| ++.++++-..++.|+.++..++.....+. +....-..|+|+|++++|+ +
T Consensus 212 ~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYva 290 (433)
T 4hw6_A 212 FTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYII 290 (433)
T ss_dssp ECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEE
T ss_pred EECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEE
Confidence 33321111 1121 233456788999 56655555567889999998776522222 1122234699999998554 4
Q ss_pred eeCCCcEEEeeccC--CeE---EEEccc---------------cCCeEEEEe---------cC-CCEEEEEeCCCCEEEE
Q psy17902 291 GGTDKSVRVWKIQE--ESQ---LVFNGH---------------SRGIDMTRR---------VN-DQQFITCGEDGTLSLW 340 (454)
Q Consensus 291 ~~~dg~i~i~d~~~--~~~---~~~~~~---------------~~~i~~~~~---------~~-~~~l~~~~~dg~i~iw 340 (454)
-...+.|+.+++.. +.. ..+.+. -..-..+.+ .. +.++++-...+.|+.+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 45567899877652 211 122221 011223444 33 3445555567889888
Q ss_pred ecCCCccceeeecccC-----C----CCCCCCCCcEEEEEEe-cCCCEEEEecCCCcEEEEEcC
Q psy17902 341 SILKKVPTHTIPVAHG-----Y----DSSSSEPNWITSVACL-HNSDLVASGSYDGCVKLWKIT 394 (454)
Q Consensus 341 d~~~~~~~~~~~~~~~-----~----~~~~~~~~~i~~~~~s-~~~~~l~~~~~dg~v~iwd~~ 394 (454)
+. .+. +.++..... . ......-.....|+++ ++|.++++-..++.|+.++++
T Consensus 371 ~~-~G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 371 TP-EGR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CT-TSE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-CCC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 85 443 222221100 0 0001122347889999 677777766677888888764
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.62 E-value=4.7e-06 Score=83.75 Aligned_cols=193 Identities=11% Similarity=0.049 Sum_probs=108.4
Q ss_pred ceEEEEEe-CCCcEEEEecC-CC----cEEEEeCCCc-cEEeecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEe
Q psy17902 192 PILALAVA-NNNELVASGDN-NS----NIKLWSSSLE-HLHTFTGHKAPITGLAISFECDTLYSSSND-----RSIKVWN 259 (454)
Q Consensus 192 ~v~~~~~~-~~~~~l~~~~~-dg----~v~vw~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd 259 (454)
.+...+|| |||++||.+.. +| .|+++|+.+. .... ..-......++|+||++.|+....+ ..|++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 67889999 99998886543 22 4999999443 3111 0001123468899999888877654 3688889
Q ss_pred CCCcee--EEEee-ccCCceeEEEeecCCCEEEEeeC---CCcEEEeeccCC--eE--EEEcc-ccCCeEEEEecCCCEE
Q psy17902 260 IEDRAY--VETLF-GHQSAITSLDILAKNRVISSGGT---DKSVRVWKIQEE--SQ--LVFNG-HSRGIDMTRRVNDQQF 328 (454)
Q Consensus 260 ~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~--~~--~~~~~-~~~~i~~~~~~~~~~l 328 (454)
+.++.. ...+. .......++.|+|+|++|+..+. ...|+++|+.++ .. ..+.. .........+..++.|
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 887642 22222 22344668899999998876553 346888888765 22 22222 2233333333456666
Q ss_pred EEEeCC---C--CEEEEecCCCcccee-eecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcE--EEEEc
Q psy17902 329 ITCGED---G--TLSLWSILKKVPTHT-IPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCV--KLWKI 393 (454)
Q Consensus 329 ~~~~~d---g--~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v--~iwd~ 393 (454)
+..+.. + .|..+++.+...... +.. +. ....+..+.+. .+.++++...+|.. .++++
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~-~~------~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVD-HS------EDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEEC-CC------SSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEEC-CC------CCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 555432 2 566666654211111 111 11 01124555554 23355666677764 45554
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.61 E-value=0.00027 Score=62.91 Aligned_cols=227 Identities=8% Similarity=-0.003 Sum_probs=129.2
Q ss_pred EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCC----ceeEEEeeccCCceeE
Q psy17902 204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIED----RAYVETLFGHQSAITS 278 (454)
Q Consensus 204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~----~~~~~~~~~~~~~v~~ 278 (454)
+|+.+.. ..|+..++.+.....+......+.+++|++.+..|+.+. ..+.|..+++.. ......+...-.....
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 81 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 81 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred EEEEECC-CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE
Confidence 3444443 568888985543333333455678999998766555554 568999999876 2222222222245678
Q ss_pred EEeecCC-CEEEEeeCCCcEEEeeccCCeEEEE-ccc-cCCeEEEEecCCCEEEEEe-CC-CCEEEEecCCCccceeeec
Q psy17902 279 LDILAKN-RVISSGGTDKSVRVWKIQEESQLVF-NGH-SRGIDMTRRVNDQQFITCG-ED-GTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 279 ~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~-~~~-~~~i~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~ 353 (454)
+++.+.+ ++.++-...+.|.++++.......+ ... ..+-.....+.++.++.+. .. +.|..+++... ....+..
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEE
Confidence 9998655 4555556678999999876544322 212 2233333344455555444 33 67888887432 2222211
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR 432 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~ 432 (454)
. .-.+...++++|++..|+.+ +..+.|..+++........+...........|++. +..|+.+-...++
T Consensus 161 ~--------~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 161 E--------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEA 230 (316)
T ss_dssp S--------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred C--------CCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCe
Confidence 1 12348899999876655544 45678999998743222222211122345677774 3466656466788
Q ss_pred eeeeeeeCCC
Q psy17902 433 FGRWKTIKGV 442 (454)
Q Consensus 433 i~~W~~~~~~ 442 (454)
|..++...+.
T Consensus 231 V~~~~~~~g~ 240 (316)
T 1ijq_A 231 IFSANRLTGS 240 (316)
T ss_dssp EEEEETTTCC
T ss_pred EEEEeCCCCc
Confidence 8888765543
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.58 E-value=0.00032 Score=62.35 Aligned_cols=232 Identities=9% Similarity=-0.001 Sum_probs=136.7
Q ss_pred EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEE-EecCCCcEEEEeCCC----ccEEe-ecc
Q psy17902 156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVA-SGDNNSNIKLWSSSL----EHLHT-FTG 229 (454)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~dg~v~vw~~~~----~~~~~-~~~ 229 (454)
+|+.+.. ..|+..++.+......+. ....+..++|++.+..|+ +-...+.|..+++.+ ..... +..
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~~~~~~~-------~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~ 74 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 74 (316)
T ss_dssp EEEEECB-SSEEEEETTSCCCEEEEC-------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred EEEEECC-CeEEEEECCCcceEehhc-------CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeC
Confidence 4555443 568888988765443332 234678999998655444 445568999999854 22222 222
Q ss_pred cCCCeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCC--CcEEEeeccCCe
Q psy17902 230 HKAPITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTD--KSVRVWKIQEES 306 (454)
Q Consensus 230 ~~~~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--g~i~i~d~~~~~ 306 (454)
.-.....+++.+.+..| ++-...+.|.++++........+.........++++|.+..|+.+... +.|..+++....
T Consensus 75 ~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 75 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (316)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence 23456789998755555 454567899999987544333333334567899999876655554432 678888876544
Q ss_pred EEEE-ccccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902 307 QLVF-NGHSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383 (454)
Q Consensus 307 ~~~~-~~~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 383 (454)
...+ .........+.+. .++.|+ +-+..+.|..+|+... ....+..... .......+++. .+.++++-.
T Consensus 155 ~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~------~~~~P~giav~-~~~ly~~d~ 226 (316)
T 1ijq_A 155 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEK------RLAHPFSLAVF-EDKVFWTDI 226 (316)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTT------TTSSEEEEEEE-TTEEEEEET
T ss_pred eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCC------ccCCcEEEEEE-CCEEEEEEC
Confidence 4332 2222223344443 455555 4446678999998643 2333321110 11226777875 455666666
Q ss_pred CCCcEEEEEcCCCceeeEec
Q psy17902 384 YDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 384 ~dg~v~iwd~~~~~~~~~~~ 403 (454)
..+.|..++..+++.+..+.
T Consensus 227 ~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 227 INEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTTEEEEEETTTCCCCEEEE
T ss_pred CCCeEEEEeCCCCcceEEEe
Confidence 77889999987776555443
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=0.00013 Score=68.14 Aligned_cols=251 Identities=9% Similarity=-0.013 Sum_probs=144.8
Q ss_pred CeEEEEEcC-CCCEEEEE-eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE-------eCCCcEEEEecCCC--
Q psy17902 144 SITCIAVTS-DSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV-------ANNNELVASGDNNS-- 212 (454)
Q Consensus 144 ~V~~~~~s~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~dg-- 212 (454)
....|+|+| +...|+.+ ...+.|++.|+.++......... .........|+| ++++.+|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~---~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN---TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT---TSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC---ccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 367899998 34445544 44467888998876655433321 113346899999 99998666665543
Q ss_pred -----cEEEEeCCC--ccE-----EeecccCCCeEEEEEcCCC-CEEEEEeCCCcEEEEeCC-------Ccee-------
Q psy17902 213 -----NIKLWSSSL--EHL-----HTFTGHKAPITGLAISFEC-DTLYSSSNDRSIKVWNIE-------DRAY------- 265 (454)
Q Consensus 213 -----~v~vw~~~~--~~~-----~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~-------~~~~------- 265 (454)
.|.+++... ... ..+... .....++++|++ .++++-..++.|..+|+. ++..
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred cccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 266665422 221 222221 234577889954 445555567889999987 4543
Q ss_pred ----EEEe-e-ccCCceeEEEeecCCCEE-EEeeCCCcEEEeeccC--CeE---EEEccc---c-------------CCe
Q psy17902 266 ----VETL-F-GHQSAITSLDILAKNRVI-SSGGTDKSVRVWKIQE--ESQ---LVFNGH---S-------------RGI 317 (454)
Q Consensus 266 ----~~~~-~-~~~~~v~~~~~~~~~~~l-~~~~~dg~i~i~d~~~--~~~---~~~~~~---~-------------~~i 317 (454)
...+ . +.....+.|+|+|++++| ++-+..+.|+.++... +.. ..+.+. . .+.
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~ 375 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPC 375 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEE
T ss_pred cccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCe
Confidence 1121 1 223445789999999954 4445667888866543 221 122221 0 111
Q ss_pred EEEEec--------CCCEEEEEeCCCCEEEEecCCCccceeeeccc-----------CC----CCCCCCCCcEEEEEEec
Q psy17902 318 DMTRRV--------NDQQFITCGEDGTLSLWSILKKVPTHTIPVAH-----------GY----DSSSSEPNWITSVACLH 374 (454)
Q Consensus 318 ~~~~~~--------~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-----------~~----~~~~~~~~~i~~~~~s~ 374 (454)
..++.. .+.++++-..+..|+.++ .++ .+.++.... +. ......-.....|++++
T Consensus 376 ~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~ 453 (496)
T 3kya_A 376 QGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDD 453 (496)
T ss_dssp EEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEET
T ss_pred EEEEEccccccccCCCeEEEEECCCCEEEEEe-CCC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEEC
Confidence 133332 345555666788999998 344 333432211 10 01112234578999999
Q ss_pred C-CCEEEEecCCCcEEEEEcCCCceee
Q psy17902 375 N-SDLVASGSYDGCVKLWKITPKRTLE 400 (454)
Q Consensus 375 ~-~~~l~~~~~dg~v~iwd~~~~~~~~ 400 (454)
+ |.++++=+.+..|+.+++.......
T Consensus 454 ~~g~lyVaD~~N~rIrki~~~~~~~~~ 480 (496)
T 3kya_A 454 VKEMFYVHDQVGHTIRTISMEQEENVA 480 (496)
T ss_dssp TTTEEEEEETTTTEEEEEEECCCC---
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcccc
Confidence 6 7777777778899999987654443
No 282
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.58 E-value=0.00069 Score=66.08 Aligned_cols=160 Identities=7% Similarity=-0.031 Sum_probs=100.9
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCce-ecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEe
Q psy17902 142 RASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSK-VCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWS 218 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~ 218 (454)
-..+..|+|++.+..|+.+. ..+.|..++++.... ...+. ........+++.+.+. +.++-...+.|.+.+
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~------~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~ 112 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV------SGLLSPDGLACDWLGEKLYWTDSETNRIEVSN 112 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEEC------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEe------CCCCCcCeEEEEecCCEEEEEeCCCCEEEEEE
Confidence 34578999999766666554 457888888876421 11111 1224688999998554 455555678999999
Q ss_pred CCCccEEeec-ccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCC
Q psy17902 219 SSLEHLHTFT-GHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTD 294 (454)
Q Consensus 219 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d 294 (454)
+++.....+. ..-.....|++.|.+..|+.+.. .+.|...++............-...+.|++++++..|+.+ ...
T Consensus 113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~ 192 (619)
T 3s94_A 113 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKL 192 (619)
T ss_dssp TTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTT
T ss_pred CCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCC
Confidence 9776654443 34456778999997666666653 4577777776433322222334457899999876655544 455
Q ss_pred CcEEEeeccCCeE
Q psy17902 295 KSVRVWKIQEESQ 307 (454)
Q Consensus 295 g~i~i~d~~~~~~ 307 (454)
+.|..+++.....
T Consensus 193 ~~I~~~~~dG~~~ 205 (619)
T 3s94_A 193 NFIHKSNLDGTNR 205 (619)
T ss_dssp CCEEEESSSCCEE
T ss_pred CeEEEecCCCCcc
Confidence 6788888865443
No 283
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.58 E-value=0.00044 Score=63.73 Aligned_cols=233 Identities=8% Similarity=-0.036 Sum_probs=140.4
Q ss_pred CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCCcEEEEeCCC-----ccEEeec
Q psy17902 155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNSNIKLWSSSL-----EHLHTFT 228 (454)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~~~-----~~~~~~~ 228 (454)
.+|+.+. ...|+..++.......... ....+..|+|++....|+.. ...+.|..+++.+ .....+.
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~~~~~~~-------~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~ 155 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 155 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCSCEEEEC-------SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC
T ss_pred ceeEEec-cceeEEEccCCcceeEecc-------ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe
Confidence 3555554 4688888888665433322 34578899999865555554 4568898898854 2233333
Q ss_pred ccCCCeEEEEEcCCCC-EEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCC
Q psy17902 229 GHKAPITGLAISFECD-TLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEE 305 (454)
Q Consensus 229 ~~~~~v~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~ 305 (454)
........+++.+.+. ++++-...+.|.+.++........+.........|++.|.+.+|+.+.. .+.|...++...
T Consensus 156 ~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 156 RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 3445678899988444 4445556788999998865544444434455789999997666655542 468888888765
Q ss_pred eEEEE-ccccCCeEEEEec-CCCEEEEE-eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe
Q psy17902 306 SQLVF-NGHSRGIDMTRRV-NDQQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG 382 (454)
Q Consensus 306 ~~~~~-~~~~~~i~~~~~~-~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 382 (454)
....+ .........+.+. .++.|+.+ +..+.|..+|+..... ..+..... .......+++. .+.++++-
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~------~l~~P~gl~v~-~~~lywtd 307 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEK------RLAHPFSLAVF-EDKVFWTD 307 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSS------TTSSEEEEEEE-TTEEEEEE
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCC------CCCCCEEEEEe-CCEEEEec
Confidence 44332 2222223334443 45555544 4667899999864333 22221111 11225677773 44566666
Q ss_pred cCCCcEEEEEcCCCceeeEec
Q psy17902 383 SYDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 383 ~~dg~v~iwd~~~~~~~~~~~ 403 (454)
...+.|..++..++..+..+.
T Consensus 308 ~~~~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 308 IINEAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp SSSCSEEEEESSSCCCCEEEE
T ss_pred CCCCeEEEEEcCCCCceEEEe
Confidence 677889999977776655554
No 284
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.57 E-value=0.0001 Score=67.57 Aligned_cols=233 Identities=6% Similarity=-0.046 Sum_probs=135.5
Q ss_pred EEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeecc
Q psy17902 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGH 272 (454)
Q Consensus 194 ~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~ 272 (454)
.|.+..+. .+|+.+. ...|+.+++.+..+..+......+..++|++.+..|+.+ ...+.|..+++........+...
T Consensus 80 ~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 80 SCKALGPE-PVLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp CEEECSSC-CEEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred eECCcccc-ceeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 34444443 3444443 357888888655544444445568899999866655554 45778999998866543333323
Q ss_pred CCceeEEEeecCC-CEEEEeeCCCcEEEeeccCCeEE-EEccc-cCCeEEEEecCCCEEEEE-eCC-CCEEEEecCCCcc
Q psy17902 273 QSAITSLDILAKN-RVISSGGTDKSVRVWKIQEESQL-VFNGH-SRGIDMTRRVNDQQFITC-GED-GTLSLWSILKKVP 347 (454)
Q Consensus 273 ~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~~i~~~~~~~~~~l~~~-~~d-g~i~iwd~~~~~~ 347 (454)
......+++.+.+ +++++-...+.|.+.++...... ..... ..+...+..+.++.|+.. ... +.|..+++.....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 3345778888755 44555556778999988765433 22222 223333344445554443 344 6788888754322
Q ss_pred ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE-ecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 348 THTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS-GSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~-~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
...... ...+...|+++|++..|+. -+..+.|..+++........+.. .......|++. +..|+.+
T Consensus 238 ~~~~~~---------~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~--~~~~P~giav~--~~~ly~t 304 (386)
T 3v65_B 238 RIIADT---------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ--GLPHPFAITVF--EDSLYWT 304 (386)
T ss_dssp EEEECS---------SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS--SCSSEEEEEEE--TTEEEEE
T ss_pred EEEEEC---------CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC--CCCCceEEEEE--CCEEEEe
Confidence 222111 1223789999986665544 45567899999865433333322 23346678873 3455555
Q ss_pred ecCCCceeeeeeeCC
Q psy17902 427 IGTEHRFGRWKTIKG 441 (454)
Q Consensus 427 ~~~d~~i~~W~~~~~ 441 (454)
-...+.|..++...+
T Consensus 305 d~~~~~V~~~~~~~G 319 (386)
T 3v65_B 305 DWHTKSINSANKFTG 319 (386)
T ss_dssp ETTTTEEEEEETTTC
T ss_pred eCCCCeEEEEECCCC
Confidence 466778877775444
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.55 E-value=0.0001 Score=62.70 Aligned_cols=203 Identities=10% Similarity=0.062 Sum_probs=128.0
Q ss_pred CCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCccEEeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee-
Q psy17902 189 SYPPILALAVANNNE-LVASGDNNSNIKLWSSSLEHLHTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY- 265 (454)
Q Consensus 189 ~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~- 265 (454)
-...+..++|+|++. ++++...++.|...|.++..+..+.- -....-.|++.+++.++++.-.++.+.++++.....
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i 104 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEV 104 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCE
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCee
Confidence 334799999999765 45557778899999998777776632 235788899998887666655678899998765432
Q ss_pred --EEEee------ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccC---CeEE-EEc-------cccCCeEEEEec-C-
Q psy17902 266 --VETLF------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQE---ESQL-VFN-------GHSRGIDMTRRV-N- 324 (454)
Q Consensus 266 --~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~---~~~~-~~~-------~~~~~i~~~~~~-~- 324 (454)
+.... ........|+|+|.++.|+++.......+|.+.. ...+ ... ........+.+. .
T Consensus 105 ~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~t 184 (255)
T 3qqz_A 105 KILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQK 184 (255)
T ss_dssp EEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTT
T ss_pred eeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCC
Confidence 22221 1334568999999998777777666666666541 1111 111 011233444443 3
Q ss_pred CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902 325 DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393 (454)
Q Consensus 325 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~ 393 (454)
+.+++.......|.++|.. ++.+..+....+...........-.|+|.++|++.++ +.-+.++.|.-
T Consensus 185 g~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 185 NTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 3455566677888889965 5577766665433222112234789999999985555 55566666643
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.53 E-value=0.0003 Score=64.80 Aligned_cols=228 Identities=8% Similarity=-0.024 Sum_probs=135.0
Q ss_pred EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCc----eeEEEeeccCCceeE
Q psy17902 204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDR----AYVETLFGHQSAITS 278 (454)
Q Consensus 204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~----~~~~~~~~~~~~v~~ 278 (454)
+|+.+. ...|+..++.+.....+......+..|+|++....|+.+. ..+.|+.+++... .....+.........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 444444 3678888886555544555567788999998766666554 5678999998752 222233323456788
Q ss_pred EEeecC-CCEEEEeeCCCcEEEeeccCCeEEEEc--cccCCeEEEEecCCCEEEEEe-C-CCCEEEEecCCCccceeeec
Q psy17902 279 LDILAK-NRVISSGGTDKSVRVWKIQEESQLVFN--GHSRGIDMTRRVNDQQFITCG-E-DGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 279 ~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~i~~~~~~~~~~l~~~~-~-dg~i~iwd~~~~~~~~~~~~ 353 (454)
|++.+. +++.++-...+.|.+.++.......+. ....+...+..+.++.|+... . .+.|...++........+..
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 999874 455555566788999998876544322 222233333344455555443 2 47888888754332222211
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR 432 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~ 432 (454)
.-.+...|++++++..|+.+ +..+.|..+++........+..........+|++ ++..|+.+-...+.
T Consensus 244 ---------~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v--~~~~lywtd~~~~~ 312 (400)
T 3p5b_L 244 ---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV--FEDKVFWTDIINEA 312 (400)
T ss_dssp ---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE--ETTEEEEEESSSCS
T ss_pred ---------CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE--eCCEEEEecCCCCe
Confidence 12348899999877766555 4567899999875433333322112233456666 34466655466778
Q ss_pred eeeeeeeCCCe
Q psy17902 433 FGRWKTIKGVK 443 (454)
Q Consensus 433 i~~W~~~~~~~ 443 (454)
|..++...+..
T Consensus 313 V~~~~~~~G~~ 323 (400)
T 3p5b_L 313 IFSANRLTGSD 323 (400)
T ss_dssp EEEEESSSCCC
T ss_pred EEEEEcCCCCc
Confidence 88887655543
No 287
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.52 E-value=0.00053 Score=61.81 Aligned_cols=258 Identities=10% Similarity=0.113 Sum_probs=158.2
Q ss_pred CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC-ccEEeecccCCCeEEEEEcCC
Q psy17902 164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL-EHLHTFTGHKAPITGLAISFE 242 (454)
Q Consensus 164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~-~~~~~~~~~~~~v~~~~~~~~ 242 (454)
..|.|.|+.++......+. ..-+.-.+|..+.||.-. ...+.|+|+.. ..+..+.- ...|.-=.|-.+
T Consensus 48 ~~vvIiDl~~~~~~~rrpi---------~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~ 116 (494)
T 1bpo_A 48 AQVVIIDMNDPSNPIRRPI---------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL 116 (494)
T ss_dssp CEEEEEETTSTTSCEEEEC---------CCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEET
T ss_pred CeEEEEECCCCCcceeccc---------ccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCC
Confidence 4888999988665433222 223455678877777665 67999999944 44555543 345554556533
Q ss_pred CCEEEEEeCCCcEEEEeCCCc-eeEEEeecc----CCceeEEEeecCCCEEEEee-------CCCcEEEeeccCCeEEEE
Q psy17902 243 CDTLYSSSNDRSIKVWNIEDR-AYVETLFGH----QSAITSLDILAKNRVISSGG-------TDKSVRVWKIQEESQLVF 310 (454)
Q Consensus 243 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~ 310 (454)
+.|+..+ +..|+-|++... .++..+..| ...|..-..+++.++++..+ -.|.+.+|+...+....+
T Consensus 117 -~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~i 194 (494)
T 1bpo_A 117 -NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI 194 (494)
T ss_dssp -TEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEE
T ss_pred -CeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchh
Confidence 3555554 467999999743 445555443 34566777788888876543 247889999998888888
Q ss_pred ccccCCeEEEEecCC----CEEEEEeC---CCCEEEEecCCC---ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902 311 NGHSRGIDMTRRVND----QQFITCGE---DGTLSLWSILKK---VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380 (454)
Q Consensus 311 ~~~~~~i~~~~~~~~----~~l~~~~~---dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 380 (454)
.+|......+..... ..|..+.. .+.++|.++... .+........-.-..........++..++.-.+++
T Consensus 195 eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEE
T ss_pred eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEE
Confidence 888776655544422 23333333 378999988543 11111110000111112345577899999888999
Q ss_pred EecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeee
Q psy17902 381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437 (454)
Q Consensus 381 ~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~ 437 (454)
.-+.-|.|++||+.++.++..-+- ...+|...+-.....-+++- ...|.|..-.
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrI--s~~~iF~t~~~~~~~Gi~~V-nr~GqVl~v~ 328 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRI--SGETIFVTAPHEATAGIIGV-NRKGQVLSVC 328 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEEETTTTEEEEE-ETTCEEEEEE
T ss_pred EEecCceEEEEecccceeeeeecc--cCCceEEecccCCCCcEEEE-ccCceEEEEE
Confidence 999999999999999988876654 33445444444443334333 3555554433
No 288
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.48 E-value=0.00015 Score=65.67 Aligned_cols=235 Identities=11% Similarity=0.036 Sum_probs=121.2
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE--Eee---cccCCCeEEEEEcCC---CCEEEEEeC-C-----CcEEE
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSSSLEHL--HTF---TGHKAPITGLAISFE---CDTLYSSSN-D-----RSIKV 257 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~--~~~---~~~~~~v~~~~~~~~---~~~l~~~~~-d-----g~i~i 257 (454)
....|+|.|+|+++++ ...|.|.+++ .+... ..+ .........|+|+|+ +..|+++.. . +.|..
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 5678999999985555 5569999998 44321 111 122456889999998 555555543 2 67888
Q ss_pred EeCCCce-----eE-EEee---ccCCceeEEEeecCCCEEEEeeCC-------------CcEEEeeccC-----------
Q psy17902 258 WNIEDRA-----YV-ETLF---GHQSAITSLDILAKNRVISSGGTD-------------KSVRVWKIQE----------- 304 (454)
Q Consensus 258 wd~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~----------- 304 (454)
|+..... .+ ..+. +.......|+|.|+|.+.++.+.. |.|.-++...
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 8876431 11 1122 111234689999999776664321 4555555443
Q ss_pred ---CeEEEEccccCCeEEEEec-CCCEEEEEeCCCCE------EEEecCCCcc----ceeeec-ccCCCCC---CCCCCc
Q psy17902 305 ---ESQLVFNGHSRGIDMTRRV-NDQQFITCGEDGTL------SLWSILKKVP----THTIPV-AHGYDSS---SSEPNW 366 (454)
Q Consensus 305 ---~~~~~~~~~~~~i~~~~~~-~~~~l~~~~~dg~i------~iwd~~~~~~----~~~~~~-~~~~~~~---~~~~~~ 366 (454)
...+...++..+..+.+.+ .+..+++-.....+ .|.-+..+.. ...-.. ....... -.....
T Consensus 190 ~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~a 269 (352)
T 2ism_A 190 RGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQGFP 269 (352)
T ss_dssp TTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCC
T ss_pred CCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCCCCC
Confidence 0111222333333334444 33433333222221 1221211110 000000 0000000 001123
Q ss_pred EEEEEEecCCCEEEEecCCCcEEEEEcCCCce------eeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902 367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRT------LEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~------~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
...++| .+|.++++.-..+.|...++..... ...+.. ..+.+..+++.|||..+++..+.+|
T Consensus 270 p~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~--~~~rp~~v~~~pdG~lyv~~~~~~g 337 (352)
T 2ism_A 270 PGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS--GFGRLREVQVGPDGALYVTTSNRDG 337 (352)
T ss_dssp EEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE--SSCCEEEEEECTTSCEEEEECSTTT
T ss_pred CcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc--cCCCeeEEEECCCCcEEEEEeCCCC
Confidence 667787 5677777766777888888764431 112211 2357899999999988777644444
No 289
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.46 E-value=0.00013 Score=64.85 Aligned_cols=203 Identities=8% Similarity=-0.025 Sum_probs=126.2
Q ss_pred eEEEEEcCCCCEE-EEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEEEeCCCc
Q psy17902 145 ITCIAVTSDSKHV-YSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKLWSSSLE 222 (454)
Q Consensus 145 V~~~~~s~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~vw~~~~~ 222 (454)
+.+++|++....| ++-...+.|..+++........+.. ........+++.+. +.++++-...+.|.++++.+.
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~-----~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV-----SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE-----ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc-----CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 6789999865544 4555668899999876532111100 12234667899874 455555556789999999765
Q ss_pred cEEeec-ccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCCCcEE
Q psy17902 223 HLHTFT-GHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTDKSVR 298 (454)
Q Consensus 223 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~ 298 (454)
....+. ........+++.|.+..|+.+.. .+.|...++............-...+.|++++++..|+.+ +..+.|.
T Consensus 112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 544443 44456789999987666666653 5788888886433222222223456899999876655544 4567899
Q ss_pred EeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902 299 VWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP 352 (454)
Q Consensus 299 i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 352 (454)
.+|+...... ...........+....+..+++-...+.|..++..++.....+.
T Consensus 192 ~~d~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 192 KSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEETTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEcCCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 9998754433 22212222233333455566666677889999987777665554
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.46 E-value=0.00034 Score=62.20 Aligned_cols=232 Identities=8% Similarity=-0.027 Sum_probs=134.1
Q ss_pred EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCcc--EEeecccCC
Q psy17902 156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE-LVASGDNNSNIKLWSSSLEH--LHTFTGHKA 232 (454)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~--~~~~~~~~~ 232 (454)
+|+.+. ...|+.+++........... .....+.+++|.+... ++.+-...+.|..+++.+.. ...+...-.
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~~~~~~~~-----~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGKENATIVV-----GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTTSCCEEEE-----EEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCS
T ss_pred EEEEEc-cCeEEEEECCCCceEEEEEe-----cCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCC
Confidence 444443 46788999886531111111 1223567899998544 44454556889999985442 122222234
Q ss_pred CeEEEEEcCCCCEE-EEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEee--CCCcEEEeeccCCeEEE
Q psy17902 233 PITGLAISFECDTL-YSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGG--TDKSVRVWKIQEESQLV 309 (454)
Q Consensus 233 ~v~~~~~~~~~~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~ 309 (454)
....+++.+.+..| ++-...+.|.++++........+.........+++.|.+..|+.+. ..+.|..+++.......
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~ 159 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFI 159 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEE
Confidence 56788998755444 4545678899999875433322323445678999998766665554 25778888876543332
Q ss_pred E-ccccCCeEEEEec-CCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902 310 F-NGHSRGIDMTRRV-NDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG 386 (454)
Q Consensus 310 ~-~~~~~~i~~~~~~-~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 386 (454)
+ ...-..-..+.+. .++.|+ +-+..+.|..+|+.... ...+... .......+++.. +.++.+-...+
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~--------~~~~P~glav~~-~~lywtd~~~~ 229 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKG--------SLPHPFALTLFE-DILYWTDWSTH 229 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECS--------CCSCEEEEEEET-TEEEEEETTTT
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecC--------CCCCceEEEEeC-CEEEEEecCCC
Confidence 2 2222222344443 455554 44567889999986432 2222210 112266777753 44556666678
Q ss_pred cEEEEEcCCCceeeEec
Q psy17902 387 CVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 387 ~v~iwd~~~~~~~~~~~ 403 (454)
.|..++..+++....+.
T Consensus 230 ~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 230 SILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEEEETTTCCSCEEEE
T ss_pred eEEEEECCCCCceEEEe
Confidence 89999987776554443
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.46 E-value=0.00065 Score=60.71 Aligned_cols=231 Identities=10% Similarity=-0.018 Sum_probs=123.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEE-EeCC
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKL-WSSS 220 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~v-w~~~ 220 (454)
...+.+|.|++ +. ++.++..|.|.. ..+.+..-...... ......+..+.+.+++..++++. +|.|.. .|-
T Consensus 79 ~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~tW~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~S~Dg- 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQSWSQIPLD---PKLPGSPRLIKALGNGSAEMITN-VGAIYRTKDS- 150 (327)
T ss_dssp CCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTSSCEECCCC---TTCSSCEEEEEEEETTEEEEEET-TCCEEEESST-
T ss_pred CccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCCCceECccc---cCCCCCeEEEEEECCCCEEEEeC-CccEEEEcCC-
Confidence 44688999986 44 444455665543 33333322222110 01223577888877777777665 454432 332
Q ss_pred Ccc-EEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEE-EeC--CCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCc
Q psy17902 221 LEH-LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV-WNI--EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS 296 (454)
Q Consensus 221 ~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i-wd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 296 (454)
+.. ......+...+..+.+.+++.+++++. .|.+.. +|- .+.+.+. ......+..+.+.+++.+++ ++.+|.
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~ 226 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGK 226 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCce
Confidence 221 222234556789999999887776654 455544 342 2223332 23456788899988887665 456787
Q ss_pred EEEeeccCCeEEE-Ec-c---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEE
Q psy17902 297 VRVWKIQEESQLV-FN-G---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA 371 (454)
Q Consensus 297 i~i~d~~~~~~~~-~~-~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 371 (454)
+++.+...+.... .. . ....+..+.+.+...+++++.+|.| ++....+..-..+..... .+..+.++.
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW~~~~~~~~------~~~~~~~v~ 299 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTWQQDVDVKK------VPSNFYKIL 299 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSCEECGGGTT------SSSCCCEEE
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCcccEEcCccCC------CCCCeEEEE
Confidence 7776422222221 11 1 1223555555555556666667877 344444433333321111 112267788
Q ss_pred EecCCCEEEEecCCCcEEEEE
Q psy17902 372 CLHNSDLVASGSYDGCVKLWK 392 (454)
Q Consensus 372 ~s~~~~~l~~~~~dg~v~iwd 392 (454)
|.+++. +++++.+|.|.-++
T Consensus 300 ~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 300 FFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEETTE-EEEECSTTEEEEEC
T ss_pred EECCCc-eEEEcCCceEEEEc
Confidence 876655 55556688776654
No 292
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.43 E-value=0.00017 Score=63.77 Aligned_cols=185 Identities=9% Similarity=0.160 Sum_probs=117.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecC----CC---EEEEeeC---CCcEEEeecc--CCeEEE
Q psy17902 242 ECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK----NR---VISSGGT---DKSVRVWKIQ--EESQLV 309 (454)
Q Consensus 242 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~i~i~d~~--~~~~~~ 309 (454)
...+++.....+-+.+||+ +++.+..+.. +.++.+.+-|. +. ++++... +++|.+|++. ++....
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3456676677788999999 7888887743 56777777663 21 3333333 5789999773 333222
Q ss_pred Ecc-------c-cCCe-EEEE-ecCCC--EEEEEeCCCCEEEEecC-------CCccceeeecccCCCCCCCCCCcEEEE
Q psy17902 310 FNG-------H-SRGI-DMTR-RVNDQ--QFITCGEDGTLSLWSIL-------KKVPTHTIPVAHGYDSSSSEPNWITSV 370 (454)
Q Consensus 310 ~~~-------~-~~~i-~~~~-~~~~~--~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~~~~~~~~~~i~~~ 370 (454)
... . ..+. .|+. .+..+ ++++...+|.+..|++. +.+.+.++.... .+-.|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs----------q~Egc 185 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS----------QTEGM 185 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS----------CEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC----------CcceE
Confidence 211 0 1111 2222 23233 57778888999999983 234556665432 28889
Q ss_pred EEecCCCEEEEecCCCcEEEEEcC-----CCceeeEeccCCCceeeeEEEE--cCCCC-EEEEEecCCCceeeeeee
Q psy17902 371 ACLHNSDLVASGSYDGCVKLWKIT-----PKRTLEFLQDIPLSGVINSLVF--TSDHK-HLVAGIGTEHRFGRWKTI 439 (454)
Q Consensus 371 ~~s~~~~~l~~~~~dg~v~iwd~~-----~~~~~~~~~~~~~~~~v~~l~~--s~d~~-~l~~~~~~d~~i~~W~~~ 439 (454)
...+....|+.+-.+.-|..++.. +++.+..+........+..|++ .++++ +|++++-.++.+.+|+..
T Consensus 186 vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 186 AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 999988899999998666666644 2344544432223345778887 56666 788886677889999885
No 293
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.38 E-value=0.0013 Score=65.80 Aligned_cols=231 Identities=8% Similarity=-0.028 Sum_probs=133.6
Q ss_pred EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeCCCc-----cEEeecc
Q psy17902 156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSSSLE-----HLHTFTG 229 (454)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~~~~-----~~~~~~~ 229 (454)
+|+.+. ...|+..++.......... ....+..|+|.+....| ++-...+.|+.+++.+. ....+..
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~-------~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~ 468 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR 468 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEEC-------SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECS
T ss_pred cccccc-ccceeEeeccCCcceeeec-------CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec
Confidence 444443 3567777776544332222 33467899999855444 45455678988988542 2333333
Q ss_pred cCCCeEEEEEcCCCCEEEE-EeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCe
Q psy17902 230 HKAPITGLAISFECDTLYS-SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEES 306 (454)
Q Consensus 230 ~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~ 306 (454)
.......|++.+.+..|+. -...+.|.+.++........+.........|++.|.+.+|+.+.. .+.|.+.++....
T Consensus 469 ~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 469 DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 4456778999887755554 455789999999855443333334456789999998666655543 3678888887655
Q ss_pred EEEEcc-ccCCeEEEE-ecCCCEEEEE-eCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902 307 QLVFNG-HSRGIDMTR-RVNDQQFITC-GEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383 (454)
Q Consensus 307 ~~~~~~-~~~~i~~~~-~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 383 (454)
...+.. .......+. .+..+.|+.+ ...+.|..+++........+..... -.....|++.. +.++++-.
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~-------l~~P~glav~~-~~lYwtD~ 620 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKR-------LAHPFSLAVFE-DKVFWTDI 620 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTT-------TSSEEEEEEET-TEEEEEET
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCc-------cCCCCEEEEeC-CEEEEEEC
Confidence 543322 222233333 3345555444 4567899998854433322221110 11255666643 34555555
Q ss_pred CCCcEEEEEcCCCceeeEe
Q psy17902 384 YDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 384 ~dg~v~iwd~~~~~~~~~~ 402 (454)
..+.|...+..++..+..+
T Consensus 621 ~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 621 INEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTTEEEEEETTTCCCCEEE
T ss_pred CCCEEEEEeCCCCcceEEe
Confidence 6678888887777554444
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.00065 Score=63.51 Aligned_cols=248 Identities=9% Similarity=-0.010 Sum_probs=142.3
Q ss_pred CceEEEEEeCC-CcEEEEe-cCCCcEEEEeCCCccEEeeccc----CCCeEEEEE-------cCCCCEEEEEeCCC----
Q psy17902 191 PPILALAVANN-NELVASG-DNNSNIKLWSSSLEHLHTFTGH----KAPITGLAI-------SFECDTLYSSSNDR---- 253 (454)
Q Consensus 191 ~~v~~~~~~~~-~~~l~~~-~~dg~v~vw~~~~~~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~dg---- 253 (454)
.....|+|+|. ...|+++ ...+.|++.|+....+..+..- ......|+| ++++.+|+++...+
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 35678999983 4444444 4446788999877666665432 235889999 99999777776554
Q ss_pred ---cEEEEeCCC-ceeE-----EEeeccCCceeEEEeecC-CCEEEEeeCCCcEEEeecc-------CCeE---------
Q psy17902 254 ---SIKVWNIED-RAYV-----ETLFGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQ-------EESQ--------- 307 (454)
Q Consensus 254 ---~i~iwd~~~-~~~~-----~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~-------~~~~--------- 307 (454)
.|.+++... +... ..+... .....++++|+ +.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred cCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 266675443 2221 122211 23457788995 5556666677889999997 4433
Q ss_pred -----E-EEccccCCeEEEEecCCCE-EEEEeCCCCEEEEecCC--Cccc--eeeecccCCCCC------CCCCCcEE-E
Q psy17902 308 -----L-VFNGHSRGIDMTRRVNDQQ-FITCGEDGTLSLWSILK--KVPT--HTIPVAHGYDSS------SSEPNWIT-S 369 (454)
Q Consensus 308 -----~-~~~~~~~~i~~~~~~~~~~-l~~~~~dg~i~iwd~~~--~~~~--~~~~~~~~~~~~------~~~~~~i~-~ 369 (454)
+ .......+..+++.++++. +++-+....|+.++... +... ..+....+.... ...-.... .
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 1 1111122344555566774 44555778888866532 2211 122111011000 00112244 4
Q ss_pred EEEe-------cCCCEEEEecCCCcEEEEEcCCCceeeEeccCC-------------Cc---------eeeeEEEEcCCC
Q psy17902 370 VACL-------HNSDLVASGSYDGCVKLWKITPKRTLEFLQDIP-------------LS---------GVINSLVFTSDH 420 (454)
Q Consensus 370 ~~~s-------~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~-------------~~---------~~v~~l~~s~d~ 420 (454)
++.. +++.++++=..+++|+.++ .++. +.++.+.. .. .....|++++++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~ 455 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVK 455 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTT
T ss_pred EEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCC
Confidence 5554 5667777777788999998 4553 33332210 01 236789999974
Q ss_pred CEEEEEecCCCceeeeeeeCC
Q psy17902 421 KHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 421 ~~l~~~~~~d~~i~~W~~~~~ 441 (454)
..|+++-..+++|+.++....
T Consensus 456 g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 456 EMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp TEEEEEETTTTEEEEEEECCC
T ss_pred CEEEEEeCCCCEEEEEECCCC
Confidence 456666477888988877543
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.34 E-value=0.00017 Score=63.08 Aligned_cols=165 Identities=10% Similarity=0.093 Sum_probs=111.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCCceecccCCcccC--CCCCCceEEEEE---eCCCcEEEEec-----
Q psy17902 141 HRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKVCSSPFVKTD--RKSYPPILALAV---ANNNELVASGD----- 209 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~~~~---~~~~~~l~~~~----- 209 (454)
....-.+++|++....|+.++ ..|.|..|+...+..... .+.... ......+..|.| .|+++++++..
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 444556889988666666665 789999999975543322 221100 011224689999 68888777543
Q ss_pred --------CCCcEEEEeCC----CccEEeec--cc-----------CCCeEEEEEcCCCCEEEEEeCC-CcEEEEeCCCc
Q psy17902 210 --------NNSNIKLWSSS----LEHLHTFT--GH-----------KAPITGLAISFECDTLYSSSND-RSIKVWNIEDR 263 (454)
Q Consensus 210 --------~dg~v~vw~~~----~~~~~~~~--~~-----------~~~v~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~ 263 (454)
.+..|..||+. ++.+.... .. ......++..++|+..++++.. +.|...+....
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 25779999987 55544332 11 1247899999999999999988 88888887644
Q ss_pred eeEEEee------ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE
Q psy17902 264 AYVETLF------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ 307 (454)
Q Consensus 264 ~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 307 (454)
.+..+. ......+.|+++|+++.|++....|.|..+|+.....
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~ 218 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYA 218 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSC
T ss_pred -EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcc
Confidence 333221 1122367999999999888887799999999886444
No 296
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.30 E-value=0.0011 Score=58.46 Aligned_cols=193 Identities=8% Similarity=0.151 Sum_probs=123.8
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC----Cc---EEEEecC---CCcEEEEeC--C
Q psy17902 153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN----NE---LVASGDN---NSNIKLWSS--S 220 (454)
Q Consensus 153 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~~---dg~v~vw~~--~ 220 (454)
...+++.....+-+.+||+ .++.+..++. +.++.+..-|+ |+ ++++... +++|.+|++ .
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~ 109 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK 109 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--------SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--------CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC
Confidence 3456777777889999999 6777666541 35666666653 22 2333333 578999976 4
Q ss_pred CccEEeecc------cC-CCeEEEEE--cCC-CC-EEEEEeCCCcEEEEeCC-------CceeEEEeeccCCceeEEEee
Q psy17902 221 LEHLHTFTG------HK-APITGLAI--SFE-CD-TLYSSSNDRSIKVWNIE-------DRAYVETLFGHQSAITSLDIL 282 (454)
Q Consensus 221 ~~~~~~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~dg~i~iwd~~-------~~~~~~~~~~~~~~v~~~~~~ 282 (454)
...+..+.. .. ..+..+|+ +|. +. ++++...+|.+..|++. +.+.++++. ..+.+-.+...
T Consensus 110 ~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~EgcvvD 188 (355)
T 3amr_A 110 NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGMAAD 188 (355)
T ss_dssp TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEEEEE
T ss_pred CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceEEEc
Confidence 444555521 11 56677888 664 43 68888889999999882 345667765 34578888899
Q ss_pred cCCCEEEEeeCCCcEEEeecc-----CCeEEEEcccc---CCeEEEEe---cCCC-EEEEEe-CCCCEEEEecC-CCccc
Q psy17902 283 AKNRVISSGGTDKSVRVWKIQ-----EESQLVFNGHS---RGIDMTRR---VNDQ-QFITCG-EDGTLSLWSIL-KKVPT 348 (454)
Q Consensus 283 ~~~~~l~~~~~dg~i~i~d~~-----~~~~~~~~~~~---~~i~~~~~---~~~~-~l~~~~-~dg~i~iwd~~-~~~~~ 348 (454)
+....|+.+-.+..|..|+.. +...+...+.. ..+..+.. .++. +|++++ .+.++.+||.. +.+.+
T Consensus 189 d~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 189 DEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV 268 (355)
T ss_dssp TTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred CCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence 888899999888766666654 23344322211 23443333 3333 666666 67899999996 66667
Q ss_pred eeeeccc
Q psy17902 349 HTIPVAH 355 (454)
Q Consensus 349 ~~~~~~~ 355 (454)
..+....
T Consensus 269 g~f~Ig~ 275 (355)
T 3amr_A 269 ADFRITD 275 (355)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 7775443
No 297
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.29 E-value=0.00062 Score=61.50 Aligned_cols=224 Identities=12% Similarity=-0.004 Sum_probs=117.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCcee--cccCCcccCCCCCCceEEEEEeCC---CcEEEEecC-C----
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV--CSSPFVKTDRKSYPPILALAVANN---NELVASGDN-N---- 211 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~-d---- 211 (454)
-.....|+|.|+|+++++ ...|.|.+++ ++... ..+. ...........|+|+|+ +..|+++.. .
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~---v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELS---VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecce---EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 345789999999985554 5679999998 33321 1111 11123456889999998 444544433 2
Q ss_pred -CcEEEEeCCCc------cEE-eec---ccCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCc----
Q psy17902 212 -SNIKLWSSSLE------HLH-TFT---GHKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDR---- 263 (454)
Q Consensus 212 -g~v~vw~~~~~------~~~-~~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~---- 263 (454)
+.|..|+.... .+. .+. ........|+|.|+|.++++.+. .|.|.-++....
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 56777776432 111 122 11123468999999976666432 256666666530
Q ss_pred ----------eeEEEeeccCCceeEEEeec-CCCEEEEeeCCCcE------EEeeccCCe------------------EE
Q psy17902 264 ----------AYVETLFGHQSAITSLDILA-KNRVISSGGTDKSV------RVWKIQEES------------------QL 308 (454)
Q Consensus 264 ----------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i------~i~d~~~~~------------------~~ 308 (454)
..+. ..++. ....++|+| ++.++++-.....+ .|.-+..+. ..
T Consensus 184 npf~~~~~~~~~i~-a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 184 NPFLGRRGARPEVY-SLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp CTTTTCTTSCTTEE-EECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CcccCCCCCCccEE-EEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 1111 12343 356789999 55655443222221 122222221 11
Q ss_pred -EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc------eeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902 309 -VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT------HTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381 (454)
Q Consensus 309 -~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 381 (454)
.+..+. ....+.+..+..+++....+.|...++...... ..+. . ....+..+++.|+|.+.++
T Consensus 262 ~~~~~~~-ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~--~-------~~~rp~~v~~~pdG~lyv~ 331 (352)
T 2ism_A 262 YFWPQGF-PPGNLAFFRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL--S-------GFGRLREVQVGPDGALYVT 331 (352)
T ss_dssp EECTTCC-CEEEEEEETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE--E-------SSCCEEEEEECTTSCEEEE
T ss_pred EecCCCC-CCcceEEECCEEEEEECCCCEEEEEEECCCCcceeecchheec--c-------cCCCeeEEEECCCCcEEEE
Confidence 121122 223344455655555556677777776543321 1111 0 1123889999999986655
Q ss_pred ec
Q psy17902 382 GS 383 (454)
Q Consensus 382 ~~ 383 (454)
..
T Consensus 332 ~~ 333 (352)
T 2ism_A 332 TS 333 (352)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.28 E-value=0.0021 Score=57.98 Aligned_cols=231 Identities=11% Similarity=0.063 Sum_probs=123.5
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeCCCc-cEEee---cccCCCeEEEEEcCC---CCEEEEEeC----C----CcEE
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSSSLE-HLHTF---TGHKAPITGLAISFE---CDTLYSSSN----D----RSIK 256 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~-~~~~~---~~~~~~v~~~~~~~~---~~~l~~~~~----d----g~i~ 256 (454)
....|+|.|+|+++++ ..+|.|.+++..+. .+..+ .........|+|+|+ +..|+++.. + +.|.
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 5678999999985555 55699999986544 22221 122356889999997 555555443 2 5688
Q ss_pred EEeCCCc-------eeE-EEeec-cCCceeEEEeecCCCEEEEeeC-------------CCcEEEeeccCC---------
Q psy17902 257 VWNIEDR-------AYV-ETLFG-HQSAITSLDILAKNRVISSGGT-------------DKSVRVWKIQEE--------- 305 (454)
Q Consensus 257 iwd~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~i~d~~~~--------- 305 (454)
.|+.... +.+ ..+.. .......|.|.|+|.++++.+. .|.|.-++....
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 8887643 111 11221 1123467999999987776443 244555554432
Q ss_pred eEEEEccccCCeEEEEecCCCEEEEEeCC-C---CEEEEecCCCcc----ceeeec-ccCCCC----CCCCCCcEEEEEE
Q psy17902 306 SQLVFNGHSRGIDMTRRVNDQQFITCGED-G---TLSLWSILKKVP----THTIPV-AHGYDS----SSSEPNWITSVAC 372 (454)
Q Consensus 306 ~~~~~~~~~~~i~~~~~~~~~~l~~~~~d-g---~i~iwd~~~~~~----~~~~~~-~~~~~~----~~~~~~~i~~~~~ 372 (454)
..+...++..+..+.+.+....|+++... + .|.+.. .+.. ...-.. ..+... ..........++|
T Consensus 189 ~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~ 266 (354)
T 3a9g_A 189 SPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASF 266 (354)
T ss_dssp CCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEE
T ss_pred CcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEE
Confidence 12233445455555555523334433321 1 133222 1110 000000 000000 0001223788888
Q ss_pred e-------cCCCEEEEecCCCcEEEEEcCCC-cee--eEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 373 L-------HNSDLVASGSYDGCVKLWKITPK-RTL--EFLQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 373 s-------~~~~~l~~~~~dg~v~iwd~~~~-~~~--~~~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
. .+|.++++.-..+.|...++... ... ..+.. .....+..+++.|||...++.
T Consensus 267 y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 267 VHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK-NVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp CCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT-TTSCCEEEEEECTTSCEEEEE
T ss_pred ECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc-CCCCCeeEEEECCCCcEEEEE
Confidence 4 56777777777788999988753 222 12221 124578999999999766665
No 299
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.25 E-value=0.0045 Score=64.71 Aligned_cols=280 Identities=10% Similarity=0.055 Sum_probs=145.7
Q ss_pred CCCCeEEEEEcCC------CCEEEEEeC-CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEe--CCCcEEEEecCC
Q psy17902 141 HRASITCIAVTSD------SKHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVA--NNNELVASGDNN 211 (454)
Q Consensus 141 h~~~V~~~~~s~~------~~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d 211 (454)
-...|.|+++.|. ++++++|+. |++|+|+++.+.+.+....+. ......++.+. ....+|..|-.|
T Consensus 552 l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~-----~~~~p~si~l~~~~~~~~L~igl~d 626 (1158)
T 3ei3_A 552 MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLG-----GEIIPRSILMTTFESSHYLLCALGD 626 (1158)
T ss_dssp CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECC-----SSCCEEEEEEEEETTEEEEEEEETT
T ss_pred CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECC-----CCCCCcEEEEEEeCCCcEEEEEeCC
Confidence 3457999999863 479999997 999999999876655433321 11223333332 344688999999
Q ss_pred CcEEEEeC---CCccEE--eecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEE-eecC-
Q psy17902 212 SNIKLWSS---SLEHLH--TFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD-ILAK- 284 (454)
Q Consensus 212 g~v~vw~~---~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~-~~~~- 284 (454)
|.+.-+.+ ++.... +..--..++.-..+...+..-+.+..+....+|.-+ +..... .-....+.+++ |+..
T Consensus 627 G~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~ 704 (1158)
T 3ei3_A 627 GALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDG 704 (1158)
T ss_dssp SEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSS
T ss_pred CeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCccc
Confidence 98866654 222221 111123455544454444333333334444455433 222211 11122333333 3322
Q ss_pred -CCEEEEeeCCCcEEEeeccCCeEE---EEccccCCeEEEEecCCCEEEEEe----------------------------
Q psy17902 285 -NRVISSGGTDKSVRVWKIQEESQL---VFNGHSRGIDMTRRVNDQQFITCG---------------------------- 332 (454)
Q Consensus 285 -~~~l~~~~~dg~i~i~d~~~~~~~---~~~~~~~~i~~~~~~~~~~l~~~~---------------------------- 332 (454)
..-++.. .++.++|..+...... .+.-...+-..+..+..+.++.+.
T Consensus 705 ~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1158)
T 3ei3_A 705 YPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSV 783 (1158)
T ss_dssp STTEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEE
T ss_pred CCCcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcc
Confidence 1233333 3455888776432211 111111111122222222222111
Q ss_pred ---------------------CCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEe---cC-CCEEEEec----
Q psy17902 333 ---------------------EDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACL---HN-SDLVASGS---- 383 (454)
Q Consensus 333 ---------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s---~~-~~~l~~~~---- 383 (454)
.-+.|+++|..+.+.+..+..... ..+.+++.. .+ ..+|++|+
T Consensus 784 ~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~n--------E~~~sv~~v~~~~~~~~~lvVGTa~~~ 855 (1158)
T 3ei3_A 784 SSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQN--------EYALSLVSCKLGKDPNTYFIVGTAMVY 855 (1158)
T ss_dssp CCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTT--------EEEEEEEEECCTTCCCCEEEEEEEECC
T ss_pred cccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCC--------cceEEEEEEEEccCCCEEEEEEeeecC
Confidence 123477778777776666654332 225555532 22 35888886
Q ss_pred ------CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeCC
Q psy17902 384 ------YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKG 441 (454)
Q Consensus 384 ------~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~~ 441 (454)
..|.|.+|++..+ .+..+......++|++++-- +| +|+++. ...|++|+....
T Consensus 856 ~~e~~~~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~~-~g-~Lla~i--g~~l~vy~l~~~ 914 (1158)
T 3ei3_A 856 PEEAEPKQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVEF-NG-KLLASI--NSTVRLYEWTTE 914 (1158)
T ss_dssp TTCSSCCCEEEEEEEEETT-EEEEEEEEEESSCEEEEEEE-TT-EEEEEE--TTEEEEEEECTT
T ss_pred CCCCCCCceEEEEEEEECC-EEEEEEEEEcCCcCEEEeee-CC-EEEEEc--CCEEEEEECCCC
Confidence 3588999999844 45445444567889998754 34 566663 467888877543
No 300
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.24 E-value=0.0023 Score=64.00 Aligned_cols=227 Identities=8% Similarity=-0.026 Sum_probs=130.4
Q ss_pred EEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCc----eeEEEeeccCCceeE
Q psy17902 204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSS-SNDRSIKVWNIEDR----AYVETLFGHQSAITS 278 (454)
Q Consensus 204 ~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~----~~~~~~~~~~~~v~~ 278 (454)
+|+.+. ...|+..++.......+......+.+|+|.+....|+.+ ...+.|+.+++... .....+.........
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G 475 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 475 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE
T ss_pred cccccc-ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce
Confidence 344433 356788888554444444455678899999865555544 45678999998753 222233323455678
Q ss_pred EEeecCCC-EEEEeeCCCcEEEeeccCCeEEEEc-ccc-CCeEEEEecCCCEEEEEe-CC-CCEEEEecCCCccceeeec
Q psy17902 279 LDILAKNR-VISSGGTDKSVRVWKIQEESQLVFN-GHS-RGIDMTRRVNDQQFITCG-ED-GTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 279 ~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~-~~i~~~~~~~~~~l~~~~-~d-g~i~iwd~~~~~~~~~~~~ 353 (454)
|++.+.+. ++++-...+.|.+.++.......+. ... .+...+..+..+.|+... .. +.|.+.++........+..
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeC
Confidence 99987764 5555556789999999876554332 222 233333334445554443 33 6788888754433222211
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR 432 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~ 432 (454)
...+...|++++.+..|+.+ ...+.|..+++........+..........+|++. +.+|+.+-...+.
T Consensus 556 ---------~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~ 624 (791)
T 3m0c_C 556 ---------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEA 624 (791)
T ss_dssp ---------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTE
T ss_pred ---------CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCE
Confidence 12348999999876655555 44668999998655443333321112234466664 4577777456677
Q ss_pred eeeeeeeCCC
Q psy17902 433 FGRWKTIKGV 442 (454)
Q Consensus 433 i~~W~~~~~~ 442 (454)
|...+...+.
T Consensus 625 I~~~dk~tG~ 634 (791)
T 3m0c_C 625 IFSANRLTGS 634 (791)
T ss_dssp EEEEETTTCC
T ss_pred EEEEeCCCCc
Confidence 7766655443
No 301
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.18 E-value=0.0061 Score=59.51 Aligned_cols=200 Identities=9% Similarity=-0.028 Sum_probs=125.6
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEE-EEecCCCcEEEEeCC
Q psy17902 143 ASITCIAVTSDSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELV-ASGDNNSNIKLWSSS 220 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~dg~v~vw~~~ 220 (454)
..+..|+|++.+..|+.+ ..++.|..+++........+. ........|++.+.+..| ++-...+.|.+.++.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~------~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVE------FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEe------CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 357899999976666544 556899999987654332222 122356788998765544 454556889999996
Q ss_pred CccEEeec-ccCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEe-eCCCc
Q psy17902 221 LEHLHTFT-GHKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG-GTDKS 296 (454)
Q Consensus 221 ~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~ 296 (454)
+.....+. ..-.....|++.|....|+.+.. .+.|...++...... .+...-.....|++++++..|+.+ ...+.
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~GlalD~~~~~LY~aD~~~~~ 189 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGLTIDYAKRRLYWTDLDTNL 189 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEEEEETTTTEEEEEETTTTE
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceEEEccccCEEEEEECCCCE
Confidence 65544443 34456789999996666666653 567888888654432 332344567899999977666555 45678
Q ss_pred EEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902 297 VRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH 349 (454)
Q Consensus 297 i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 349 (454)
|..+++.......+.........+....+..+++-...+.|...|..++....
T Consensus 190 I~~~d~dG~~~~v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 190 IESSNMLGLNREVIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRT 242 (628)
T ss_dssp EEEEETTSCSCEEEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEEcCCCCceEEeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceE
Confidence 89999876443322222222223333345555555567888888876665433
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.18 E-value=3.3e-05 Score=76.63 Aligned_cols=226 Identities=9% Similarity=0.000 Sum_probs=127.3
Q ss_pred CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCCC----ccE-EeecccCCCeEE
Q psy17902 163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSSL----EHL-HTFTGHKAPITG 236 (454)
Q Consensus 163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~~----~~~-~~~~~~~~~v~~ 236 (454)
.+.|+..++.+......+. ....+..|+|.+.+..|+.+. ..+.|+.+++.+ ... ..+.........
T Consensus 385 ~~~I~~id~~~~~~~~~~~-------~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIP-------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 457 (699)
T ss_dssp TTC-CEECTTSCCEECCSC-------CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCC
T ss_pred ccceEEEeCCCCcceeeec-------cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcce
Confidence 3577888887655443332 223567889998766666654 457899999854 222 222222234566
Q ss_pred EEEcCCC-CEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCeEEEEc-c
Q psy17902 237 LAISFEC-DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEESQLVFN-G 312 (454)
Q Consensus 237 ~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~-~ 312 (454)
|++.+.+ +++++-...+.|.++++........+.........|+++|.+.+|+.+.. .+.|.++++.......+. .
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~ 537 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 537 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCS
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeC
Confidence 8887544 44444456788999998765433333322345678999987655554442 267888887654333222 1
Q ss_pred -ccCCeEEEEecC-CCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEE
Q psy17902 313 -HSRGIDMTRRVN-DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL 390 (454)
Q Consensus 313 -~~~~i~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~i 390 (454)
...+....+.+. +.++++-+..+.|.++++.... ...+..... .......|++..+ .++++....+.|..
T Consensus 538 ~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~~~~~~------~~~~P~glavd~~-~lywtd~~~~~V~~ 609 (699)
T 1n7d_A 538 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEK------RLAHPFSLAVFED-KVFWTDIINEAIFS 609 (699)
T ss_dssp SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEECCCSS------SCSSCCCCEEETT-EEEEECSTTTCEEE
T ss_pred CCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEEEecCC------cCCCceEeEEECC-EEEEEeCCCCeEEE
Confidence 112222333334 4455555567889999986432 222211100 0111334555544 45556666789999
Q ss_pred EEcCCCceeeEec
Q psy17902 391 WKITPKRTLEFLQ 403 (454)
Q Consensus 391 wd~~~~~~~~~~~ 403 (454)
++..+++.+..+.
T Consensus 610 ~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 610 ANRLTGSDVNLLA 622 (699)
T ss_dssp EETTTEEEEECCC
T ss_pred EEccCCCceEEee
Confidence 9988777666654
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.15 E-value=0.0031 Score=54.70 Aligned_cols=236 Identities=11% Similarity=0.134 Sum_probs=150.7
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC--CCccE
Q psy17902 147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS--SLEHL 224 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~~~~ 224 (454)
+.-.+|..+.||.-. ...+.|+|+++...+....+ ...|.-=.|-.+.. |+..+ +..|+-|++ +..+.
T Consensus 71 sAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-------~e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~ 140 (365)
T 2xzh_A 71 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-------TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPV 140 (365)
T ss_dssp EEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-------SSCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCE
T ss_pred eeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-------CCccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCc
Confidence 445689988888876 67999999999988877653 23666666665544 44333 368999999 34666
Q ss_pred EeecccC----CCeEEEEEcCCCCEEEEEeC-------CCcEEEEeCCCceeEEEeeccCCceeEEEeecC--C-CEEEE
Q psy17902 225 HTFTGHK----APITGLAISFECDTLYSSSN-------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAK--N-RVISS 290 (454)
Q Consensus 225 ~~~~~~~----~~v~~~~~~~~~~~l~~~~~-------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~--~-~~l~~ 290 (454)
+.+..|. ..|..-..+++.+.++..+- .|.+.+|..+.+. .+.+.+|......+.+..+ . ++++.
T Consensus 141 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 141 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEE
T ss_pred eeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeeeeeEEEecCCCCCCceEEEE
Confidence 6665543 45666677888887665442 4788999988553 4567778665544443211 1 23333
Q ss_pred eeC---CCcEEEeeccCC---e------EE-E-Ecc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902 291 GGT---DKSVRVWKIQEE---S------QL-V-FNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 291 ~~~---dg~i~i~d~~~~---~------~~-~-~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 353 (454)
+.. .+.++|.++... . .. . +.. ..-++..-....-+.+..-+.-|.|++||+.++.++..-..
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrI 299 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 299 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEecc
Confidence 322 257888887443 1 11 1 111 12244555556677888999999999999999999988765
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 402 (454)
.... |-.-+.+....=+++....|.|.--.++....+..+
T Consensus 300 S~d~---------iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ivpyi 339 (365)
T 2xzh_A 300 SGET---------IFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYI 339 (365)
T ss_dssp CSSC---------EEEEEEEGGGTEEEEEETTCEEEEEEECTTTHHHHH
T ss_pred CCCc---------eEEecccCCCCcEEEEcCCCEEEEEEECcccEehhh
Confidence 4432 554455444444555557788877777766554433
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.15 E-value=0.0022 Score=57.86 Aligned_cols=144 Identities=8% Similarity=0.035 Sum_probs=76.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccC-CcccCCCCCCceEEEEEeCC---CcEEEEec-C-------C
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSP-FVKTDRKSYPPILALAVANN---NELVASGD-N-------N 211 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~---~~~l~~~~-~-------d 211 (454)
....|+|.|+|++|+++...|.|++++... .....+. ..............|+|+|+ +..|+++. . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g-~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGK-GLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTT-EECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCC-ceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 468999999998444556789999998542 2111111 10011122346789999995 44444432 2 1
Q ss_pred CcEEEEeCCCc-----cEEe----ec---ccCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCce--
Q psy17902 212 SNIKLWSSSLE-----HLHT----FT---GHKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDRA-- 264 (454)
Q Consensus 212 g~v~vw~~~~~-----~~~~----~~---~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~~-- 264 (454)
..|..|+++.. .... +. ........|+|.|+|.++++.+. .|.|.-++....-
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 24555655221 1111 11 11112457999999965555433 2467777765320
Q ss_pred ----------eEEEe-eccCCceeEEEeec-CCCEEE
Q psy17902 265 ----------YVETL-FGHQSAITSLDILA-KNRVIS 289 (454)
Q Consensus 265 ----------~~~~~-~~~~~~v~~~~~~~-~~~~l~ 289 (454)
....+ .++. ....++|+| ++.+++
T Consensus 178 ~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~ 213 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWL 213 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEE
T ss_pred CCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEE
Confidence 11111 2443 357899999 455444
No 305
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.13 E-value=0.0021 Score=57.98 Aligned_cols=242 Identities=12% Similarity=0.044 Sum_probs=125.0
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeCCCccE---Eee----cccCCCeEEEEEcCC---CCEEEEEeC--------CC
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSSSLEHL---HTF----TGHKAPITGLAISFE---CDTLYSSSN--------DR 253 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~---~~~----~~~~~~v~~~~~~~~---~~~l~~~~~--------dg 253 (454)
....|+|.|+|+.|+++...|.|++++..+... ..+ .........|+|+|+ +..|+.+.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 467899999998334445579999998644321 111 122345789999996 455554432 23
Q ss_pred cEEEEeCCCc--e--eEEE-eec------cCCceeEEEeecCCCEEEEeeCC-------------CcEEEeeccCC----
Q psy17902 254 SIKVWNIEDR--A--YVET-LFG------HQSAITSLDILAKNRVISSGGTD-------------KSVRVWKIQEE---- 305 (454)
Q Consensus 254 ~i~iwd~~~~--~--~~~~-~~~------~~~~v~~~~~~~~~~~l~~~~~d-------------g~i~i~d~~~~---- 305 (454)
.|..|++... . .... +.. .......|.|.|+|.+.++.+.. |.|.-++....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666766432 1 1111 111 11123579999999766654332 45666665432
Q ss_pred ----------eEEEEccccCCeEEEEecCCCEEEEEeCC--CCEEEEecCCCcc----cee---------eec-----cc
Q psy17902 306 ----------SQLVFNGHSRGIDMTRRVNDQQFITCGED--GTLSLWSILKKVP----THT---------IPV-----AH 355 (454)
Q Consensus 306 ----------~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~----~~~---------~~~-----~~ 355 (454)
..+...++..+..+.+.+....|+++... +.=.|.-+..+.. ... +.. ..
T Consensus 179 npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~ 258 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVA 258 (353)
T ss_dssp CTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCT
T ss_pred CCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCC
Confidence 11223344444445554434455544322 1122222221111 000 000 00
Q ss_pred CCCCC---CCCCCcEEEEEEec-------CCCEEEEecCCCcEEEEEcCCCceeeEeccC-CCceeeeEEEEcCCCCEEE
Q psy17902 356 GYDSS---SSEPNWITSVACLH-------NSDLVASGSYDGCVKLWKITPKRTLEFLQDI-PLSGVINSLVFTSDHKHLV 424 (454)
Q Consensus 356 ~~~~~---~~~~~~i~~~~~s~-------~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~l~~s~d~~~l~ 424 (454)
..... -.+...+..+.|.. +|.++++.-..+.|...++..+......... .....+..+++.|||...+
T Consensus 259 ~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv 338 (353)
T 2g8s_A 259 GTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYV 338 (353)
T ss_dssp TSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEE
T ss_pred CccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEE
Confidence 00000 01122477788864 5677777777888998888765433221111 1235789999999999766
Q ss_pred EEecCCCce
Q psy17902 425 AGIGTEHRF 433 (454)
Q Consensus 425 ~~~~~d~~i 433 (454)
++-..++.|
T Consensus 339 ~td~~~g~I 347 (353)
T 2g8s_A 339 LTDESSGEL 347 (353)
T ss_dssp EECSTTEEE
T ss_pred EEeCCCCEE
Confidence 652234544
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=98.13 E-value=0.0011 Score=58.33 Aligned_cols=226 Identities=11% Similarity=0.099 Sum_probs=116.9
Q ss_pred CCCEEEEEe-CC-----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEEEeCCC
Q psy17902 153 DSKHVYSAC-KD-----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----SNIKLWSSSL 221 (454)
Q Consensus 153 ~~~~l~~~~-~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vw~~~~ 221 (454)
++.+++.|+ .+ ..+.+||+.+..-........ .... .+++ ..++.+++.|+.+ ..+.+||+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~----~r~~-~~~~-~~~~~l~v~GG~~~~~~~~~~~~~d~~~ 87 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITR----KRRY-VASV-SLHDRIYVIGGYDGRSRLSSVECLDYTA 87 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSS----CCBS-CEEE-EETTEEEEECCBCSSCBCCCEEEEETTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCCh----hhcc-ccEE-EECCEEEEEcCCCCCccCceEEEEECCC
Confidence 445666666 32 368888987765332221111 0011 1122 2356777777754 4688999833
Q ss_pred cc------EEeecccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCceeEEEeeccCC-ceeEEEeecCCCEEE
Q psy17902 222 EH------LHTFTGHKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRAYVETLFGHQS-AITSLDILAKNRVIS 289 (454)
Q Consensus 222 ~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~ 289 (454)
.. +..+........++.+ ++..++.|+.+ ..+.+||+.+.+....-..... .-.+++. -++.+++
T Consensus 88 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv 164 (301)
T 2vpj_A 88 DEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYC 164 (301)
T ss_dssp CTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEE
T ss_pred CCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCEEEE
Confidence 32 2222211222222222 56677777643 3588999887654322111111 1112222 2677777
Q ss_pred EeeCC-----CcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCC
Q psy17902 290 SGGTD-----KSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGY 357 (454)
Q Consensus 290 ~~~~d-----g~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~ 357 (454)
.|+.+ ..+.+||+.+..-........+ -..+...++..++.|+.+ ..+.+||+.+..-...-.....
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~- 243 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP- 243 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC-
T ss_pred ECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc-
Confidence 77754 4688999988766543322211 123333466667777753 4689999877643222111110
Q ss_pred CCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902 358 DSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK 396 (454)
Q Consensus 358 ~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~ 396 (454)
......+. -++.+++.|+.+ ..|.+||+.+.
T Consensus 244 ------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 244 ------RCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp ------CBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred ------ccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 01112222 267777888765 35788888765
No 307
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.13 E-value=0.0029 Score=55.45 Aligned_cols=166 Identities=8% Similarity=0.089 Sum_probs=105.3
Q ss_pred ecccCCCeEEEEEcCCCCEEEEEe-CCCcEEEEeCCCceeEEEeecc-------CCceeEEEe---ecCCCEEEEeeC--
Q psy17902 227 FTGHKAPITGLAISFECDTLYSSS-NDRSIKVWNIEDRAYVETLFGH-------QSAITSLDI---LAKNRVISSGGT-- 293 (454)
Q Consensus 227 ~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~~-- 293 (454)
+........++.|++....|+.++ ..++|..|+...+......... ...+..|.| .|++.++++...
T Consensus 8 ~~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~ 87 (334)
T 2p9w_A 8 VKVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAK 87 (334)
T ss_dssp ECCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETT
T ss_pred ecCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccc
Confidence 344445566889988666777766 6899999999865443332222 113578999 688777765431
Q ss_pred -----------CCcEEEeecc---CCeEEEEcc---cc------------CCeEEEEecCCCEEEEEeCC-CCEEEEecC
Q psy17902 294 -----------DKSVRVWKIQ---EESQLVFNG---HS------------RGIDMTRRVNDQQFITCGED-GTLSLWSIL 343 (454)
Q Consensus 294 -----------dg~i~i~d~~---~~~~~~~~~---~~------------~~i~~~~~~~~~~l~~~~~d-g~i~iwd~~ 343 (454)
+..|..||+. +++.+.... .. ....+..-..++..++++.. +.|..++..
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 5779999999 666552211 11 12344445568888888877 777777765
Q ss_pred CCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 344 KKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
.. .+..+...... .......+.|+++|+|++|++....|.|..+|+...
T Consensus 168 G~-~~~~~~~~~~~---~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 168 GK-TVSTFAWESGN---GGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp SC-CEEEEEECCCC---SSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CC-EEeeeeecCCC---cccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 43 22222111100 011223678999999998887777999999998843
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.13 E-value=0.0081 Score=58.65 Aligned_cols=229 Identities=9% Similarity=0.001 Sum_probs=137.1
Q ss_pred CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEe-cCCCcEEEEeCCCccEEeec-ccCC
Q psy17902 155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASG-DNNSNIKLWSSSLEHLHTFT-GHKA 232 (454)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~v~vw~~~~~~~~~~~-~~~~ 232 (454)
.+|+.+ ....|+..++.+......++. .....+..|+|++.+..|+.+ ..++.|..+++.+.....+. ....
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~-----~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~ 80 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPL-----TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLD 80 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCC-----CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCS
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEc-----CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCC
Confidence 355554 457899999987554333332 233468899999866555544 55789999998665444332 2224
Q ss_pred CeEEEEEcCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCeEEE
Q psy17902 233 PITGLAISFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEESQLV 309 (454)
Q Consensus 233 ~v~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~ 309 (454)
....|++.+.+..|+.+ ...+.|.+.++........+...-.....|++.|....|+.+.. .+.|...++.......
T Consensus 81 ~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~ 160 (628)
T 4a0p_A 81 YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT 160 (628)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE
T ss_pred CcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE
Confidence 57789998765555544 45678999998754332222233455689999986655555542 5677777777654443
Q ss_pred -EccccCCeEEEEecCCCEEEE-EeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCc
Q psy17902 310 -FNGHSRGIDMTRRVNDQQFIT-CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC 387 (454)
Q Consensus 310 -~~~~~~~i~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 387 (454)
......+......+.++.|+. -...+.|..+++..... ..+... ......+++.. +.++++-...+.
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~---------l~~P~glav~~-~~ly~tD~~~~~ 229 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD---------LPHPFGLTQYQ-DYIYWTDWSRRS 229 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC---------CSCEEEEEEET-TEEEEEETTTTE
T ss_pred EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc---------CCCceEEEEEC-CEEEEecCCCCE
Confidence 222222333333444555544 44678899999865433 222211 11256777765 445555556788
Q ss_pred EEEEEcCCCceee
Q psy17902 388 VKLWKITPKRTLE 400 (454)
Q Consensus 388 v~iwd~~~~~~~~ 400 (454)
|...|..++....
T Consensus 230 I~~~dk~tg~~~~ 242 (628)
T 4a0p_A 230 IERANKTSGQNRT 242 (628)
T ss_dssp EEEEETTTCCSCE
T ss_pred EEEEECCCCCceE
Confidence 9999877664433
No 309
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.08 E-value=2.5e-05 Score=77.44 Aligned_cols=203 Identities=8% Similarity=0.006 Sum_probs=121.0
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCeEEEEEcCCC----ceecccCCcccCCCCCCceEEEEEeCC-CcEEEEecCCCcEEE
Q psy17902 143 ASITCIAVTSDSKHVYSAC-KDGIIIKWLLETR----SKVCSSPFVKTDRKSYPPILALAVANN-NELVASGDNNSNIKL 216 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~-~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~v~v 216 (454)
..+..|+|++.+..|+.+. ..+.|..+++.+. .....+. ........|++.+. ++++++-...+.|.+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~------~~~~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS------RDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCC------SCC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEe------CCCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 3467889998766666554 4578999988751 1111111 11223456788754 444445455689999
Q ss_pred EeCCCccEEeecc-cCCCeEEEEEcCCCCEEEEEeC--CCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEE-EEee
Q psy17902 217 WSSSLEHLHTFTG-HKAPITGLAISFECDTLYSSSN--DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVI-SSGG 292 (454)
Q Consensus 217 w~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~ 292 (454)
+++.+..+..+.. .......|++.|.+.+|+.+.. .+.|.++++........+...-...+.|+|+|++..| ++-+
T Consensus 480 ~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 480 ADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp EBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEET
T ss_pred EecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEec
Confidence 9997666555432 2345678899987666655543 2678888876432222222223445789999876544 4445
Q ss_pred CCCcEEEeeccCCeEEEEccc----cCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeee
Q psy17902 293 TDKSVRVWKIQEESQLVFNGH----SRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIP 352 (454)
Q Consensus 293 ~dg~i~i~d~~~~~~~~~~~~----~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 352 (454)
..+.|.++++.......+... ..+... ....+..+++....+.|..++..++..+..+.
T Consensus 560 ~~~~I~~~d~dG~~~~~~~~~~~~~~~P~gl-avd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 560 KLHSISSIDVNGGNRKTILEDEKRLAHPFSL-AVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp TTTEEEEECSSSSCCEEECCCSSSCSSCCCC-EEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred CCCeEEEEccCCCceEEEEecCCcCCCceEe-EEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 567899999875443333211 112222 22344556666677899999988777666654
No 310
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.08 E-value=0.0058 Score=55.25 Aligned_cols=235 Identities=10% Similarity=0.123 Sum_probs=152.4
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC--CCccE
Q psy17902 147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS--SLEHL 224 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~--~~~~~ 224 (454)
+.-.+|..+.||.-. ..++.|+|+++...+....+ ...|.-=.|-.+. .|+..+ +..|+-|++ +..+.
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~-------~e~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~ 139 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-------TDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPV 139 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-------SSCCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceec-------CCCceEEEecCCC-eEEEEc-CCeeEEecccCCCCch
Confidence 455789888888776 68999999999888877653 2245555555444 344444 368999999 44666
Q ss_pred EeecccC----CCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCC---CEEEE
Q psy17902 225 HTFTGHK----APITGLAISFECDTLYSSS-------NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKN---RVISS 290 (454)
Q Consensus 225 ~~~~~~~----~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~ 290 (454)
+.+..|. ..|..-..+++.+.++..+ -.|.+.+|..+.+. .+.+.+|......+.+..+. .+++.
T Consensus 140 kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~f 218 (494)
T 1bpo_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCF 218 (494)
T ss_dssp EEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEEEEECTTCSSEEEEEEE
T ss_pred hheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeEEEecCCCCCCceEEEE
Confidence 6665543 4566677788888776543 24788999988543 45677887666555543221 23443
Q ss_pred eeC---CCcEEEeeccCC---e------EE--EEcc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902 291 GGT---DKSVRVWKIQEE---S------QL--VFNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 291 ~~~---dg~i~i~d~~~~---~------~~--~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 353 (454)
+.. .+.++|.++... . .. .+.. ..-++..-....-+.+...+.-|.|++||+.++.++..-..
T Consensus 219 a~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrI 298 (494)
T 1bpo_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (494)
T ss_dssp EECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecc
Confidence 333 268888888543 1 11 1111 22245555566678888999999999999999999888765
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF 401 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 401 (454)
.... |...+.+....=+++....|.|.--.++....+..
T Consensus 299 s~~~---------iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 299 SGET---------IFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 337 (494)
T ss_dssp CSSC---------EEEEEEETTTTEEEEEETTCEEEEEEECTTTHHHH
T ss_pred cCCc---------eEEecccCCCCcEEEEccCceEEEEEEccccchhh
Confidence 4322 55555555544555556788887777776655443
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.04 E-value=0.0056 Score=59.67 Aligned_cols=223 Identities=8% Similarity=-0.024 Sum_probs=123.5
Q ss_pred CCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEec-CCCcEEEEeCCCcc--EEeecccCCCeEEEEE
Q psy17902 163 DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGD-NNSNIKLWSSSLEH--LHTFTGHKAPITGLAI 239 (454)
Q Consensus 163 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~v~vw~~~~~~--~~~~~~~~~~v~~~~~ 239 (454)
...|+..++........... .....+..++|++.+..|+.+. ..+.|..+++++.. ...+...-.....+++
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~-----~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAv 91 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVV-----GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLAC 91 (619)
T ss_dssp SSBEEEECCC---------C-----BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEE
T ss_pred cccEEEEeCCCCcceEEEEE-----cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEE
Confidence 46788888875431111111 2334678999998766666554 46788889985542 2233333357889999
Q ss_pred cCCCCEEEEE-eCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeC--CCcEEEeeccCCeEEEEc-cccC
Q psy17902 240 SFECDTLYSS-SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT--DKSVRVWKIQEESQLVFN-GHSR 315 (454)
Q Consensus 240 ~~~~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~-~~~~ 315 (454)
.+.+..|+.+ ...+.|.+.++........+...-.....|++.|.+..|+.+.. .+.|...++.......+. ....
T Consensus 92 D~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~ 171 (619)
T 3s94_A 92 DWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIY 171 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCS
T ss_pred EecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCC
Confidence 9865555544 55789999998755432223234455688999997665555543 356766676654333222 2222
Q ss_pred CeEEEEe-cCCCEEE-EEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEc
Q psy17902 316 GIDMTRR-VNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393 (454)
Q Consensus 316 ~i~~~~~-~~~~~l~-~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~ 393 (454)
....+.. +.++.|+ +-...+.|..+++............ ..+ ...|++..+ .++++-...+.|...|.
T Consensus 172 ~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~------~~~---P~gi~~~~~-~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 172 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS------LPH---PFALTLFED-ILYWTDWSTHSILACNK 241 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------------CCCEEESSS-EEEEECTTTCSEEEEES
T ss_pred CCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC------CCC---ceEEEEeCC-EEEEecCCCCEEEEEEC
Confidence 2233333 3445444 4446778999988654332221100 012 235666554 45555556788999998
Q ss_pred CCCceee
Q psy17902 394 TPKRTLE 400 (454)
Q Consensus 394 ~~~~~~~ 400 (454)
.+++...
T Consensus 242 ~tg~~~~ 248 (619)
T 3s94_A 242 YTGEGLR 248 (619)
T ss_dssp SSCCCCE
T ss_pred CCCcccE
Confidence 7775443
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=98.01 E-value=0.0026 Score=56.02 Aligned_cols=226 Identities=11% Similarity=0.121 Sum_probs=115.7
Q ss_pred CCEEEEEeCC----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC-----CcEEEEeCCCccE
Q psy17902 154 SKHVYSACKD----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN-----SNIKLWSSSLEHL 224 (454)
Q Consensus 154 ~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~v~vw~~~~~~~ 224 (454)
+.+++.|+.+ ..+.+||+.+..-......... . . . .+++. -++.+++.|+.+ ..+.+||.....-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r-~--~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 89 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSR-R-C--R-AGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQW 89 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSC-C-B--S-CEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEE
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcc-c-c--c-ceEEE-ECCEEEEEeCcCCCccccceEEECCCCCce
Confidence 3455566543 3578888877643222111110 0 1 1 11222 267777777754 3588888844333
Q ss_pred Eeecc---cCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEeCCCceeEEEeec-cCCceeEEEeecCCCEEEEeeCC-
Q psy17902 225 HTFTG---HKAPITGLAISFECDTLYSSSNDR-----SIKVWNIEDRAYVETLFG-HQSAITSLDILAKNRVISSGGTD- 294 (454)
Q Consensus 225 ~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d- 294 (454)
..+.. ......++.+ ++..++.|+.++ .+.+||+.+.+....-.. ....-.+++. -++.+++.|+.+
T Consensus 90 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~ 166 (302)
T 2xn4_A 90 TSVANMRDRRSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDV 166 (302)
T ss_dssp EEECCCSSCCBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEET
T ss_pred eeCCCCCccccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCC
Confidence 22221 1112222222 567777777553 578899887654322111 1111112222 256677777653
Q ss_pred ------CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCCCCCC
Q psy17902 295 ------KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGYDSSS 361 (454)
Q Consensus 295 ------g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~ 361 (454)
..+.+||+.+..-........ .-..+...++..++.|+.+ ..+.+||+.+..-...-.....
T Consensus 167 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~----- 241 (302)
T 2xn4_A 167 ASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC----- 241 (302)
T ss_dssp TTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC-----
T ss_pred CCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc-----
Confidence 358899998876554322211 1123334466677777754 4688999876543222111110
Q ss_pred CCCCcEEEEEEecCCCEEEEecCCC-----cEEEEEcCCCc
Q psy17902 362 SEPNWITSVACLHNSDLVASGSYDG-----CVKLWKITPKR 397 (454)
Q Consensus 362 ~~~~~i~~~~~s~~~~~l~~~~~dg-----~v~iwd~~~~~ 397 (454)
.. ....+. -++.+++.|+.++ .|.+||+.+..
T Consensus 242 -r~-~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 242 -RR-NAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp -CB-SCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -cc-cCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 00 011222 2677888887653 48999988763
No 313
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.98 E-value=0.0036 Score=55.19 Aligned_cols=224 Identities=10% Similarity=0.041 Sum_probs=116.0
Q ss_pred CEEEEEeCC--CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC----CcEEEEeCCCccEEee-
Q psy17902 155 KHVYSACKD--GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN----SNIKLWSSSLEHLHTF- 227 (454)
Q Consensus 155 ~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----g~v~vw~~~~~~~~~~- 227 (454)
.+++.|+.+ ..+.+||..+..-........ .. ....++. -++.+++.|+.+ ..+.+||+....-..+
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~---~r-~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~ 86 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFE---KR-RDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKL 86 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSC---CC-BSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCc---cc-ceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECC
Confidence 355556543 578889988765332222111 11 1111222 366777777754 5788889844332222
Q ss_pred --cccCCCeEEEEEcCCCCEEEEEeCC------CcEEEEeCCCceeEEEeeccC-CceeEEEeecCCCEEEEeeC-----
Q psy17902 228 --TGHKAPITGLAISFECDTLYSSSND------RSIKVWNIEDRAYVETLFGHQ-SAITSLDILAKNRVISSGGT----- 293 (454)
Q Consensus 228 --~~~~~~v~~~~~~~~~~~l~~~~~d------g~i~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~----- 293 (454)
........++.+ ++.+++.|+.+ ..+.+||+.+.+....-.... ..-.+++. -++.+++.|+.
T Consensus 87 ~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 87 GPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNV 163 (306)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTT
T ss_pred CCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCC
Confidence 211112222222 56677777755 468999998775432211111 11112222 25667777764
Q ss_pred ----CCcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCCCCCCC
Q psy17902 294 ----DKSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGYDSSSS 362 (454)
Q Consensus 294 ----dg~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~ 362 (454)
-..+.+||+.+..-......... -..+...++..++.|+.+ ..+.+||+.+..-...-.....
T Consensus 164 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~------ 237 (306)
T 3ii7_A 164 SGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK------ 237 (306)
T ss_dssp TCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC------
T ss_pred cccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC------
Confidence 34588999988766544322211 123333466667776643 4688899877532211111110
Q ss_pred CCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902 363 EPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK 396 (454)
Q Consensus 363 ~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~ 396 (454)
.....++.+ ++.+++.|+.+ ..+.+||+.+.
T Consensus 238 -r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 238 -GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp -BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred -ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 011222223 67788888754 46888998776
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.98 E-value=0.003 Score=55.55 Aligned_cols=214 Identities=10% Similarity=0.132 Sum_probs=107.7
Q ss_pred CCcEEEEec-CC-----CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCce--
Q psy17902 201 NNELVASGD-NN-----SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRA-- 264 (454)
Q Consensus 201 ~~~~l~~~~-~d-----g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~-- 264 (454)
++.+++.|+ .+ ..+.+||+....-..+.. ......++. .++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 445666666 32 367888884433332221 111122222 356677777754 468999988765
Q ss_pred -eEEE--eeccCCceeEEEeecCCCEEEEeeCC-----CcEEEeeccCCeEEEEcccc--CCeEEEEecCCCEEEEEeCC
Q psy17902 265 -YVET--LFGHQSAITSLDILAKNRVISSGGTD-----KSVRVWKIQEESQLVFNGHS--RGIDMTRRVNDQQFITCGED 334 (454)
Q Consensus 265 -~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~--~~i~~~~~~~~~~l~~~~~d 334 (454)
.... +...... .+++. .++.+++.|+.+ ..+.+||+.+..-....... ..-..+...++..++.|+.+
T Consensus 92 ~W~~~~~~p~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGL-AGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBS-CEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBC
T ss_pred eeEECCCCCCCccc-eeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCC
Confidence 3221 1111111 12222 256777777654 35888998887655332211 11123333466667777654
Q ss_pred -----CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEecc
Q psy17902 335 -----GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQD 404 (454)
Q Consensus 335 -----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~ 404 (454)
..+.+||+.+..-...-..... ......+. -++.+++.|+.+ ..|.+||+.+..- ..+..
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~-------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W-~~~~~ 239 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATK-------RSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSW-TTVTS 239 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSC-------CBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEE-EEECC
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcc-------cccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcE-EECCC
Confidence 4688899876543222111110 00112222 266777888764 4689999987643 33333
Q ss_pred CCCceeeeEEEEcCCCCEEEEEecCC
Q psy17902 405 IPLSGVINSLVFTSDHKHLVAGIGTE 430 (454)
Q Consensus 405 ~~~~~~v~~l~~s~d~~~l~~~~~~d 430 (454)
.+....-.+++.. +++.++.| |.+
T Consensus 240 ~p~~r~~~~~~~~-~~~i~v~G-G~~ 263 (301)
T 2vpj_A 240 MTTPRCYVGATVL-RGRLYAIA-GYD 263 (301)
T ss_dssp CSSCCBSCEEEEE-TTEEEEEC-CBC
T ss_pred CCCcccceeEEEE-CCEEEEEc-CcC
Confidence 2222222222222 56555555 544
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.96 E-value=0.0095 Score=53.68 Aligned_cols=226 Identities=11% Similarity=0.024 Sum_probs=118.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCc-eecccCCcccCCCCCCceEEEEEeCC---CcEEEEecC----C--
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRS-KVCSSPFVKTDRKSYPPILALAVANN---NELVASGDN----N-- 211 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~----d-- 211 (454)
-.....|+|.|+|+++ ++..+|.|.+++. ++. .+..+. ...........|+++|+ +..|+++.. +
T Consensus 28 l~~P~~ia~~pdG~l~-V~e~~g~I~~~d~-~G~~~~~~~~---v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYL-VTERPGRLVLISP-SGKKLVASFD---VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp CSCEEEEEEEETTEEE-EEETTTEEEEECS-SCEEEEEECC---CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCCeEEEEcCCCeEE-EEeCCCEEEEEeC-CCceEeeccc---eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 4457899999999744 4566699999973 333 122111 11122346889999997 444444432 2
Q ss_pred --CcEEEEeCCCc------c--E-Eeecc-cCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCc---
Q psy17902 212 --SNIKLWSSSLE------H--L-HTFTG-HKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDR--- 263 (454)
Q Consensus 212 --g~v~vw~~~~~------~--~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~--- 263 (454)
+.|..|+.... . + ..+.. .......|+|.|+|.++++.+. .|.|.-++....
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~ 182 (354)
T 3a9g_A 103 IRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPA 182 (354)
T ss_dssp EEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCT
T ss_pred cceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCC
Confidence 56777776432 1 1 11221 1123467999999987776432 245666665432
Q ss_pred ------eeEEEeeccCCceeEEEeec-CCCEEEEeeCCC---cEEEeeccCCe------------------EE-EE-ccc
Q psy17902 264 ------AYVETLFGHQSAITSLDILA-KNRVISSGGTDK---SVRVWKIQEES------------------QL-VF-NGH 313 (454)
Q Consensus 264 ------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~~~------------------~~-~~-~~~ 313 (454)
..+. ..++.. ...++|+| ++.++++-...+ .|.+.. .+. .. .+ ..+
T Consensus 183 ~npf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ 258 (354)
T 3a9g_A 183 DNPFPNSPIW-SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSET 258 (354)
T ss_dssp TSSSTTCCEE-EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCC
T ss_pred CCCCCCCcEE-EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCC
Confidence 1121 124443 46899999 566555432221 132221 111 11 22 122
Q ss_pred cCCeEEEEe--------cCCCEEEEEeCCCCEEEEecCCCccce-eeecccCCCCCCCCCCcEEEEEEecCCCEEEEec
Q psy17902 314 SRGIDMTRR--------VNDQQFITCGEDGTLSLWSILKKVPTH-TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383 (454)
Q Consensus 314 ~~~i~~~~~--------~~~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 383 (454)
.. ...+.+ ..+.++++....+.|...++.....+. ....... ....+..+++.|+|.+.++..
T Consensus 259 ~a-p~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~------~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WA-PSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN------VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CC-EEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT------TSCCEEEEEECTTSCEEEEEC
T ss_pred cC-CcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC------CCCCeeEEEECCCCcEEEEEe
Confidence 22 333333 234455555566778888876532121 1111111 123488999999998666553
No 316
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.88 E-value=0.038 Score=57.90 Aligned_cols=275 Identities=12% Similarity=0.089 Sum_probs=147.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC------CcEEEEecC-CCcEE
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN------NELVASGDN-NSNIK 215 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~~~~~-dg~v~ 215 (454)
..|.+.+.+. .+++.++ ++.+.++.++.+........ .-...|.|+++.+. +.++++|.. |++|+
T Consensus 514 ~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~-----~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~ 585 (1158)
T 3ei3_A 514 KNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHT-----EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISAR 585 (1158)
T ss_dssp CCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEE-----ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEE
T ss_pred CEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeeccc-----CCCCceEEEEeecCCCCcccccEEEEEECCCCEEE
Confidence 4576666654 4666665 67888888775432211110 12347999999863 479999997 99999
Q ss_pred EEeCC-CccEEeecc-cCCCeEEEEEc--CCCCEEEEEeCCCcEEEEeC--CCceeEE---EeeccCCceeEEEeecCCC
Q psy17902 216 LWSSS-LEHLHTFTG-HKAPITGLAIS--FECDTLYSSSNDRSIKVWNI--EDRAYVE---TLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 216 vw~~~-~~~~~~~~~-~~~~v~~~~~~--~~~~~l~~~~~dg~i~iwd~--~~~~~~~---~~~~~~~~v~~~~~~~~~~ 286 (454)
|+++. ...+....- ......++.+. ....+|..|-.||.+..+.+ .++.... .+.| ..++.-..+...+.
T Consensus 586 I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~ 664 (1158)
T 3ei3_A 586 ILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLST 664 (1158)
T ss_dssp EEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSC
T ss_pred EEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCc
Confidence 99993 333332211 11234444443 23457889999998766554 3444332 1223 34554444443443
Q ss_pred EEEEeeCCCcEEEeeccCCeEEEEccccCCeE-EEEecC---CCEEEEEeCCCCEEEEecCCCcc--ceeeecccCCCCC
Q psy17902 287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGID-MTRRVN---DQQFITCGEDGTLSLWSILKKVP--THTIPVAHGYDSS 360 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~-~~~~~~---~~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~ 360 (454)
.-+.+..+.-..+|.-.. ......-....+. ...|+. .+-++.. .++.++|..+..... +.+++..
T Consensus 665 ~~V~a~s~rp~liy~~~~-~l~~s~l~~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~------ 736 (1158)
T 3ei3_A 665 TNVFACSDRPTVIYSSNH-KLVFSNVNLKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLY------ 736 (1158)
T ss_dssp EEEEEESSSCEEEEESSS-SEEEEEBSSSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEECS------
T ss_pred eeEEEECCCCEEEEEcCC-ceEEeccChHHhceEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEeCC------
Confidence 222223344444554332 2222222222232 233332 2334433 355699988755432 3333332
Q ss_pred CCCCCcEEEEEEecCCCEEEEecCC-------------------------------------------------CcEEEE
Q psy17902 361 SSEPNWITSVACLHNSDLVASGSYD-------------------------------------------------GCVKLW 391 (454)
Q Consensus 361 ~~~~~~i~~~~~s~~~~~l~~~~~d-------------------------------------------------g~v~iw 391 (454)
..+..++++|..+.++++..+ +.|++.
T Consensus 737 ----~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~li 812 (1158)
T 3ei3_A 737 ----ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLII 812 (1158)
T ss_dssp ----SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEE
T ss_pred ----CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEE
Confidence 238889999887755443311 246777
Q ss_pred EcCCCceeeEeccCCCceeeeEEE---EcCC-CCEEEEEec---------CCCceeeeeee
Q psy17902 392 KITPKRTLEFLQDIPLSGVINSLV---FTSD-HKHLVAGIG---------TEHRFGRWKTI 439 (454)
Q Consensus 392 d~~~~~~~~~~~~~~~~~~v~~l~---~s~d-~~~l~~~~~---------~d~~i~~W~~~ 439 (454)
|-.+.+.+..+... ....+.+++ |..+ ..+|++|++ ..|+|++++..
T Consensus 813 dp~t~~~i~~~~l~-~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~ 872 (1158)
T 3ei3_A 813 DQHTFEVLHAHQFL-QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS 872 (1158)
T ss_dssp ETTTCCEEEEEECC-TTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE
T ss_pred eCCCCeEEEEEeCC-CCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE
Confidence 77666666555432 233444444 4333 478888874 24666666665
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.85 E-value=0.012 Score=51.80 Aligned_cols=214 Identities=10% Similarity=0.125 Sum_probs=107.7
Q ss_pred CcEEEEecC--CCcEEEEeCCCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCC----CcEEEEeCCCceeEEEeecc
Q psy17902 202 NELVASGDN--NSNIKLWSSSLEHLHTFT---GHKAPITGLAISFECDTLYSSSND----RSIKVWNIEDRAYVETLFGH 272 (454)
Q Consensus 202 ~~~l~~~~~--dg~v~vw~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~ 272 (454)
+.+++.|+. ...+.+||.....-..+. .......++. .++..++.|+.+ ..+.+||+.+.+....-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 345556654 357888988443322221 1111222222 256677777754 56889999887543221111
Q ss_pred CCce-eEEEeecCCCEEEEeeCC------CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeC---------C
Q psy17902 273 QSAI-TSLDILAKNRVISSGGTD------KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGE---------D 334 (454)
Q Consensus 273 ~~~v-~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~---------d 334 (454)
.... .+++. -++.+++.|+.+ ..+.+||+.+..-........ .-..+...++..++.|+. -
T Consensus 90 ~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 90 TPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp SCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEEC
T ss_pred ccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCccccc
Confidence 1111 12222 266777777765 468899998876553322211 112233345666666653 3
Q ss_pred CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccCCCce
Q psy17902 335 GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDIPLSG 409 (454)
Q Consensus 335 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~ 409 (454)
..+.+||+.+..-...-..... ..-.++... ++.+++.|+.+ ..+.+||+.+.. ...+...+...
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~--------r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r 238 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEA--------RKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSPMPWKG 238 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSC--------CBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTE-EEECCCCSCCB
T ss_pred ceEEEeCCCCCeEEECCCccch--------hhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCc-EEECCCCCCCc
Confidence 4588999877642222111110 001112222 66777777754 358999988763 33333322222
Q ss_pred eeeEEEEcCCCCEEEEEecCC
Q psy17902 410 VINSLVFTSDHKHLVAGIGTE 430 (454)
Q Consensus 410 ~v~~l~~s~d~~~l~~~~~~d 430 (454)
.-.+++.. +++.++.| |.+
T Consensus 239 ~~~~~~~~-~~~i~v~G-G~~ 257 (306)
T 3ii7_A 239 VTVKCAAV-GSIVYVLA-GFQ 257 (306)
T ss_dssp SCCEEEEE-TTEEEEEE-CBC
T ss_pred cceeEEEE-CCEEEEEe-CcC
Confidence 22222222 56666666 543
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.84 E-value=0.0017 Score=67.42 Aligned_cols=227 Identities=11% Similarity=0.144 Sum_probs=135.9
Q ss_pred CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-CCccEEeecccCCCeEEEEEcCC
Q psy17902 164 GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-SLEHLHTFTGHKAPITGLAISFE 242 (454)
Q Consensus 164 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~~~~~~~~~~~~~~v~~~~~~~~ 242 (454)
..|.|.|+.++..+...+. ..-+.-.+|..+.||.-. ..++.|+|+ ....+..+.- +.+|.-=.|-..
T Consensus 48 ~~vvIidl~~~~~~~rrpi---------~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~ 116 (1630)
T 1xi4_A 48 AQVVIIDMNDPSNPIRRPI---------SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISL 116 (1630)
T ss_pred ceEEEEECCCCCCcccccc---------cchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCC
Confidence 4899999988765533322 222344677777766654 679999999 4444444443 345554556533
Q ss_pred CCEEEEEeCCCcEEEEeCCCc-eeEEEeecc----CCceeEEEeecCCCEEEEee-------CCCcEEEeeccCCeEEEE
Q psy17902 243 CDTLYSSSNDRSIKVWNIEDR-AYVETLFGH----QSAITSLDILAKNRVISSGG-------TDKSVRVWKIQEESQLVF 310 (454)
Q Consensus 243 ~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~i~d~~~~~~~~~ 310 (454)
+.|+..+ +..|+.|++... .++..+..| ...|..-..+++.++++..| -.|.+.+|+...+....+
T Consensus 117 -~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~i 194 (1630)
T 1xi4_A 117 -NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPI 194 (1630)
T ss_pred -CeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhh
Confidence 3455444 356999999642 333333333 45576777778888776543 357889999988777677
Q ss_pred ccccCCeEEEEecC----CCEEEEEe---CCCCEEEEecCCC---ccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902 311 NGHSRGIDMTRRVN----DQQFITCG---EDGTLSLWSILKK---VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380 (454)
Q Consensus 311 ~~~~~~i~~~~~~~----~~~l~~~~---~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 380 (454)
.+|.........+. ...|..+. ..+.++|.++... .+........-.-..........++..++.-.++.
T Consensus 195 egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy 274 (1630)
T 1xi4_A 195 EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVF 274 (1630)
T ss_pred hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEE
Confidence 77766554333321 22232222 2378999888543 11111110000000111234466788888878888
Q ss_pred EecCCCcEEEEEcCCCceeeEec
Q psy17902 381 SGSYDGCVKLWKITPKRTLEFLQ 403 (454)
Q Consensus 381 ~~~~dg~v~iwd~~~~~~~~~~~ 403 (454)
.-+.-|.|++||+.++.++..-+
T Consensus 275 ~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 275 LITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEecCceEEEEecccchhhhhcc
Confidence 88999999999999997765444
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.79 E-value=0.0067 Score=53.30 Aligned_cols=214 Identities=13% Similarity=0.149 Sum_probs=105.8
Q ss_pred CcEEEEecCC----CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCceeEEEe
Q psy17902 202 NELVASGDNN----SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRAYVETL 269 (454)
Q Consensus 202 ~~~l~~~~~d----g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~ 269 (454)
+.+++.|+.+ ..+.+||+....-..+.. ....- +++. .++..++.|+.+ ..+.+||+.+.+....-
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRA-GMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccc-eEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 4455566543 357788874433322211 11111 2222 256677777754 35889998876543221
Q ss_pred --eccCCceeEEEeecCCCEEEEeeCCC-----cEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeC-------
Q psy17902 270 --FGHQSAITSLDILAKNRVISSGGTDK-----SVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGE------- 333 (454)
Q Consensus 270 --~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~------- 333 (454)
...... .+++. -++.+++.|+.++ .+.+||+.+..-........+ -..+...++..++.|+.
T Consensus 94 ~~p~~r~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~ 171 (302)
T 2xn4_A 94 NMRDRRST-LGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQC 171 (302)
T ss_dssp CCSSCCBS-CEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEE
T ss_pred CCCccccc-eEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCcc
Confidence 111111 12222 2567777777553 578888887765543222111 12333345666666663
Q ss_pred CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccCCCc
Q psy17902 334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDIPLS 408 (454)
Q Consensus 334 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~ 408 (454)
-..+.+||+.+..-...-..... ... ...+. -++.+++.|+.+ ..+.+||+.+.. ...+...+..
T Consensus 172 ~~~~~~yd~~~~~W~~~~~~p~~------r~~-~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~ 241 (302)
T 2xn4_A 172 LSTVECYNATTNEWTYIAEMSTR------RSG-AGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNA-WRQVADMNMC 241 (302)
T ss_dssp CCCEEEEETTTTEEEEECCCSSC------CBS-CEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTE-EEEECCCSSC
T ss_pred ccEEEEEeCCCCcEEECCCCccc------ccc-ccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCC-EeeCCCCCCc
Confidence 24588899876543222111110 011 12222 267778888764 368999988763 3333332222
Q ss_pred eeeeEEEEcCCCCEEEEEecCCC
Q psy17902 409 GVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 409 ~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
..-.+++. -+++.++.| |.++
T Consensus 242 r~~~~~~~-~~~~i~v~G-G~~~ 262 (302)
T 2xn4_A 242 RRNAGVCA-VNGLLYVVG-GDDG 262 (302)
T ss_dssp CBSCEEEE-ETTEEEEEC-CBCS
T ss_pred cccCeEEE-ECCEEEEEC-CcCC
Confidence 11122222 255555555 5443
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.77 E-value=0.0079 Score=53.07 Aligned_cols=226 Identities=11% Similarity=0.117 Sum_probs=116.4
Q ss_pred CCCCEEEEEeCC----CeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----C-----CcEEEEe
Q psy17902 152 SDSKHVYSACKD----GIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----N-----SNIKLWS 218 (454)
Q Consensus 152 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d-----g~v~vw~ 218 (454)
-++.+++.|+.+ ..+.+||..+..-............| +++. -++.+++.|+. + ..+.+||
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-----~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-----AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-----EEEE-ETTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-----eEEE-ECCEEEEECCCcCCCCCCeecceEEEEC
Confidence 355677777642 36888998776543322111110111 2222 26677777765 2 4688888
Q ss_pred CCCccEEeec---ccCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEeCCCceeEEE--eeccCCceeEEEeecCCCEE
Q psy17902 219 SSLEHLHTFT---GHKAPITGLAISFECDTLYSSSND-----RSIKVWNIEDRAYVET--LFGHQSAITSLDILAKNRVI 288 (454)
Q Consensus 219 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l 288 (454)
+....-..+. .......++.+ ++..++.|+.+ ..+.+||+.+.+.... +...... .+++.. ++.++
T Consensus 97 ~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iy 172 (308)
T 1zgk_A 97 PMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIG-VGVAVL-NRLLY 172 (308)
T ss_dssp TTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEE-TTEEE
T ss_pred CCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccc-eEEEEE-CCEEE
Confidence 8443333222 11112222222 56677776643 3688999887654322 1111111 122222 56777
Q ss_pred EEeeCC-----CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccC
Q psy17902 289 SSGGTD-----KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHG 356 (454)
Q Consensus 289 ~~~~~d-----g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~ 356 (454)
+.|+.+ ..+.+||+.+..-........ .-..+...++..++.|+.+ ..+.+||+.+..-...-.....
T Consensus 173 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 173 AVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp EECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred EEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 777754 458899988876553322111 1122333466677777654 5689999877532221111110
Q ss_pred CCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCC
Q psy17902 357 YDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPK 396 (454)
Q Consensus 357 ~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~ 396 (454)
......+. -++.+++.|+.+ ..|.+||+.+.
T Consensus 253 -------r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 253 -------RSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp -------CBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred -------ccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 00112222 266777887754 35788888765
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.63 E-value=0.024 Score=50.03 Aligned_cols=182 Identities=10% Similarity=0.051 Sum_probs=93.4
Q ss_pred EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-----C------CcEEEEeCCCccE
Q psy17902 156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-----N------SNIKLWSSSLEHL 224 (454)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------g~v~vw~~~~~~~ 224 (454)
+++.|+ ..+.+||..+..-.. .... .........+...++.+++.|+. . ..+.+||.....-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~----~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLS----SQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECC----CCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCC----CCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 344555 578899988766332 1110 11112222333457777777773 1 1267788744333
Q ss_pred EeecccCCCe--EEEEEcCCCCEEEEEeCC--------CcEEEEeCCCceeEEEeeccCCc-eeEEEeecCCCEEEEeeC
Q psy17902 225 HTFTGHKAPI--TGLAISFECDTLYSSSND--------RSIKVWNIEDRAYVETLFGHQSA-ITSLDILAKNRVISSGGT 293 (454)
Q Consensus 225 ~~~~~~~~~v--~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~ 293 (454)
..+.....+- .+++.. ++..++.|+.+ ..+.+||+.+.+....-...... -.+++. -++.+++.|+.
T Consensus 80 ~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 157 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGK 157 (315)
T ss_dssp EECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCB
T ss_pred EECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCC
Confidence 3322111111 112222 56666777632 45889999876533211111111 112222 35677777776
Q ss_pred -C-----CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeCCC-----CEEEEecCCCc
Q psy17902 294 -D-----KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGEDG-----TLSLWSILKKV 346 (454)
Q Consensus 294 -d-----g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~ 346 (454)
+ ..+.+||+.+..-........ ....+...++..++.|+.++ .+.+||+.+..
T Consensus 158 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 158 GSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp CTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCe
Confidence 2 468999998876553332211 11233344667777777554 47888887653
No 322
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.62 E-value=0.071 Score=53.58 Aligned_cols=282 Identities=11% Similarity=0.068 Sum_probs=152.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL 221 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~ 221 (454)
...|.++....++.+.+ |+.. -|..++..+..... +............|.++...+++..|..|+. +-+..++...
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~ 220 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST 220 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC
Confidence 34688888887776554 5554 47778876654321 1111100012235888888877765555654 4578888754
Q ss_pred ccEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee-------ccCCceeEEEeecCCCEEEEeeC
Q psy17902 222 EHLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-------GHQSAITSLDILAKNRVISSGGT 293 (454)
Q Consensus 222 ~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~ 293 (454)
..+..+. .....|.++....++. |..|+.+| +.+++..++....... -....|.++....+|.+- .|+.
T Consensus 221 ~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~~G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~ 297 (758)
T 3ott_A 221 GQIKQTEAFHNNSIKSLALDGNGD-LLAGTDNG-LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIW-LGTD 297 (758)
T ss_dssp TEEEEEEEEEEEEEEEEEECTTCC-EEEEETTE-EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEE-EEES
T ss_pred CeEEeccCCCCCeEEEEEEcCCCC-EEEEeCCc-eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEE-EEeC
Confidence 4433322 1234578887776665 55556554 8889887655432211 122458888887777644 4555
Q ss_pred CCcEEEeeccCCeEE-EEc-----cccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCc--cceeeecccCCCCCCCCCC
Q psy17902 294 DKSVRVWKIQEESQL-VFN-----GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV--PTHTIPVAHGYDSSSSEPN 365 (454)
Q Consensus 294 dg~i~i~d~~~~~~~-~~~-----~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~ 365 (454)
.| +.++.....-.. ... .....+.++.....+.|..|+.+| +..++..++. ....+..... .......
T Consensus 298 ~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt~~G-l~~~~~~~~~~~~~~~~~~~~~--~~~l~~~ 373 (758)
T 3ott_A 298 YG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGGANG-LIRFTDPAGERHDAIWYRMGDK--TYPLSHN 373 (758)
T ss_dssp SS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEETTE-EEEESCTTSSCCCCEEECTTCS--SSCCSCS
T ss_pred Cc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEEEeeCCc-ceeecccccccceeEEeccCCc--CCCCCCC
Confidence 56 554433221111 111 012346666666666777777655 6666655432 1112211100 0011234
Q ss_pred cEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEec-cCC---CceeeeEEEEcCCCCEEEEEecCCCceeeeee
Q psy17902 366 WITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ-DIP---LSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~---~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~ 438 (454)
.|.++.-.++|++.+ |+. +-|..|+..+++...... ... ....|.++...++|...+.+ ..+.|.+++.
T Consensus 374 ~v~~i~~d~~g~lWi-gt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT--~~~Gl~~~~~ 446 (758)
T 3ott_A 374 RIRHIYEDKEQQLWI-ATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWIST--CLGGIFVVDK 446 (758)
T ss_dssp CEEEEEECTTSCEEE-EET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEE--SSSCEEEEEH
T ss_pred ceEEEEECCCCCEEE-EeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEE--CCCceEEEcc
Confidence 589998888887544 443 459999987764332211 100 12458888888887655543 3445666653
No 323
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.60 E-value=0.035 Score=49.41 Aligned_cols=255 Identities=13% Similarity=0.069 Sum_probs=128.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCC---CcEEEEe---cCCCcE
Q psy17902 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN---NELVASG---DNNSNI 214 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~---~~dg~v 214 (454)
.-.....|+|.|+|.++++--..|.|++++..++.....................|+++|+ +.+|++. ..++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 4455799999999987777655899999986655432111111111123457899999995 3344332 234455
Q ss_pred EEEeCCC------c---c--EE-eec-ccCCCeEEEEEcCCCCEEEEEeC-------------CCcEEEEeCCCc-----
Q psy17902 215 KLWSSSL------E---H--LH-TFT-GHKAPITGLAISFECDTLYSSSN-------------DRSIKVWNIEDR----- 263 (454)
Q Consensus 215 ~vw~~~~------~---~--~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~-------------dg~i~iwd~~~~----- 263 (454)
.-|.+.. . . +. .+. ........|.|.|+|.++++.+. .|.|.-.+....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 5565532 1 1 11 121 11123457999999987777543 345555554421
Q ss_pred ----eeEEEeeccCCceeEEEeecCCCEEEEe-eCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEE
Q psy17902 264 ----AYVETLFGHQSAITSLDILAKNRVISSG-GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLS 338 (454)
Q Consensus 264 ----~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~ 338 (454)
..+.. .+|.. ...++|+|++.+.++- +.++.-.|.-+..+... + |+. +.+..+
T Consensus 190 Pf~~~~i~a-~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~ny---G---------wP~----~~g~~~---- 247 (347)
T 3das_A 190 PFPGSPVYS-YGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNY---G---------WPE----AEGKGG---- 247 (347)
T ss_dssp SSTTCCEEE-BCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBC---C---------TTT----CCSSCC----
T ss_pred CCCCCeEEe-eCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEe---c---------CCc----ccCCCC----
Confidence 11111 24443 3567777766544432 11221111111111000 0 000 000000
Q ss_pred EEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCce----eeEeccCCCceeeeEE
Q psy17902 339 LWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT----LEFLQDIPLSGVINSL 414 (454)
Q Consensus 339 iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~----~~~~~~~~~~~~v~~l 414 (454)
......++..+... ......|+|. +|.+++..-..+.|....+..... ...+.. ..+.+.++
T Consensus 248 --~~~~~~P~~~~~~~---------~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~--~~gR~~dv 313 (347)
T 3das_A 248 --GSGFHDPVAQWSTD---------EASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEG--EYGRLRTV 313 (347)
T ss_dssp --CTTCCCCSEEECTT---------TCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTT--TSSCEEEE
T ss_pred --CccccCCcEecCCC---------CCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecC--CCCCccEE
Confidence 00111222222211 1126778876 466666666666777777765432 222332 34679999
Q ss_pred EEcCCCCEEEEEecCCC
Q psy17902 415 VFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 415 ~~s~d~~~l~~~~~~d~ 431 (454)
+..|||..+++....||
T Consensus 314 ~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 314 APAGGDKLWLVTSNTDG 330 (347)
T ss_dssp EEEETTEEEEEECTTSS
T ss_pred EECCCCcEEEEEcCCCC
Confidence 99999988777744454
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.59 E-value=0.016 Score=51.12 Aligned_cols=214 Identities=10% Similarity=0.129 Sum_probs=106.3
Q ss_pred CCcEEEEecCC----CcEEEEeCCCccEEeecc---cCCCeEEEEEcCCCCEEEEEeC----C-----CcEEEEeCCCce
Q psy17902 201 NNELVASGDNN----SNIKLWSSSLEHLHTFTG---HKAPITGLAISFECDTLYSSSN----D-----RSIKVWNIEDRA 264 (454)
Q Consensus 201 ~~~~l~~~~~d----g~v~vw~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~----d-----g~i~iwd~~~~~ 264 (454)
++.+++.|+.+ ..+.+||.....-..+.. ..... +++.. ++.+++.|+. + ..+.+||+.+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 55666666632 367888874433332211 11111 22222 5666777665 2 468899988765
Q ss_pred eEEE--eeccCCceeEEEeecCCCEEEEeeCC-----CcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-
Q psy17902 265 YVET--LFGHQSAITSLDILAKNRVISSGGTD-----KSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED- 334 (454)
Q Consensus 265 ~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d- 334 (454)
.... +....... +++.. ++.+++.|+.+ ..+.+||+.+..-......... -..+...++..++.|+.+
T Consensus 102 W~~~~~~p~~r~~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 179 (308)
T 1zgk_A 102 WSPCAPMSVPRNRI-GVGVI-DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDG 179 (308)
T ss_dssp EEECCCCSSCCBTC-EEEEE-TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred EeECCCCCcCcccc-EEEEE-CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCC
Confidence 4322 11111111 22222 56777777644 3688899888765533221111 122333366667777654
Q ss_pred ----CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccC
Q psy17902 335 ----GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDI 405 (454)
Q Consensus 335 ----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~ 405 (454)
..+.+||+.+..-...-..... ......+.+ ++.+++.|+.+ ..+.+||+.+.. ...+...
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~-------r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~ 249 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTI-------RSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET-WTFVAPM 249 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSC-------CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE-EEECCCC
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCc-------cccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc-EEECCCC
Confidence 4688899876532221111110 011122222 67777888764 469999998763 3333332
Q ss_pred CCceeeeEEEEcCCCCEEEEEecCC
Q psy17902 406 PLSGVINSLVFTSDHKHLVAGIGTE 430 (454)
Q Consensus 406 ~~~~~v~~l~~s~d~~~l~~~~~~d 430 (454)
+....-.+++.. +++.++.| |.+
T Consensus 250 p~~r~~~~~~~~-~~~i~v~G-G~~ 272 (308)
T 1zgk_A 250 KHRRSALGITVH-QGRIYVLG-GYD 272 (308)
T ss_dssp SSCCBSCEEEEE-TTEEEEEC-CBC
T ss_pred CCCccceEEEEE-CCEEEEEc-CcC
Confidence 222222223332 45555555 544
No 325
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.54 E-value=0.018 Score=51.94 Aligned_cols=235 Identities=8% Similarity=0.008 Sum_probs=112.0
Q ss_pred CCCEEEEEeCC-CeEEEEEcCC--CceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC-C---------CcEEEEeC
Q psy17902 153 DSKHVYSACKD-GIIIKWLLET--RSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN-N---------SNIKLWSS 219 (454)
Q Consensus 153 ~~~~l~~~~~d-g~i~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d---------g~v~vw~~ 219 (454)
++.+++.|+.+ ..+.+||+.+ ..-......... .. ... +++. -++.+++.|+. + ..+.+||+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~--~R-~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGG--PR-DQA-TSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTC--CC-BSC-EEEE-ETTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCC--cC-ccc-eEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 55666666543 4788888864 221111111100 01 111 1222 25677777765 2 46888888
Q ss_pred CCccEEeeccc----CCCeEEEEEcCCCCEEEEEeCC---------------------------------------CcEE
Q psy17902 220 SLEHLHTFTGH----KAPITGLAISFECDTLYSSSND---------------------------------------RSIK 256 (454)
Q Consensus 220 ~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~ 256 (454)
....-..+... .....++. .++.+++.|+.+ ..+.
T Consensus 94 ~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (357)
T 2uvk_A 94 KTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLL 171 (357)
T ss_dssp TTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEE
T ss_pred CCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEE
Confidence 44332222211 11122222 467777888754 4789
Q ss_pred EEeCCCceeEEEeecc-CCce-eEEEeecCCCEEEEeeC------CCcEEEeec--cCCeEEEEccc--cCC--eEEEEe
Q psy17902 257 VWNIEDRAYVETLFGH-QSAI-TSLDILAKNRVISSGGT------DKSVRVWKI--QEESQLVFNGH--SRG--IDMTRR 322 (454)
Q Consensus 257 iwd~~~~~~~~~~~~~-~~~v-~~~~~~~~~~~l~~~~~------dg~i~i~d~--~~~~~~~~~~~--~~~--i~~~~~ 322 (454)
+||+.+.+....-... ...- .+++.. ++.+++.|+. ...+.+||+ .+..-...... ... -..+..
T Consensus 172 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~ 250 (357)
T 2uvk_A 172 SFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI 250 (357)
T ss_dssp EEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE
T ss_pred EEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE
Confidence 9999876543221111 1111 233333 5667777664 345777876 44443332221 111 122444
Q ss_pred cCCCEEEEEeCC----------------------CCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEE
Q psy17902 323 VNDQQFITCGED----------------------GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380 (454)
Q Consensus 323 ~~~~~l~~~~~d----------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 380 (454)
.++..++.|+.+ ..+.+||+.+..-...-...... .. -.+ ...++.+++
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r------~~-~~~--~~~~~~i~v 321 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR------AY-GVS--LPWNNSLLI 321 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC------BS-SEE--EEETTEEEE
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc------cc-cee--EEeCCEEEE
Confidence 566677777632 25778998765432221111110 00 122 234677888
Q ss_pred EecCCC------cEEEEEcCCCceeeEecc
Q psy17902 381 SGSYDG------CVKLWKITPKRTLEFLQD 404 (454)
Q Consensus 381 ~~~~dg------~v~iwd~~~~~~~~~~~~ 404 (454)
.|+.++ .|.++++.+++.+.....
T Consensus 322 ~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 322 IGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred EeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 887653 366668887766655443
No 326
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.49 E-value=0.039 Score=48.72 Aligned_cols=210 Identities=10% Similarity=0.092 Sum_probs=104.6
Q ss_pred EEEEecCCCcEEEEeCCCccE--EeecccCCCeEEEEEcCCCCEEEEEeC-----C------CcEEEEeCCCceeEEEee
Q psy17902 204 LVASGDNNSNIKLWSSSLEHL--HTFTGHKAPITGLAISFECDTLYSSSN-----D------RSIKVWNIEDRAYVETLF 270 (454)
Q Consensus 204 ~l~~~~~dg~v~vw~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d------g~i~iwd~~~~~~~~~~~ 270 (454)
+++.|+ ..+.+||.....- ..+..........+...++..++.|+. . ..+.+||+.+.+... +.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence 445555 5788999843332 122111122223333457778888873 1 127788988775432 21
Q ss_pred ccCCc--eeEEEeecCCCEEEEeeCC--------CcEEEeeccCCeEEEEccccC--CeEEEEecCCCEEEEEeC-----
Q psy17902 271 GHQSA--ITSLDILAKNRVISSGGTD--------KSVRVWKIQEESQLVFNGHSR--GIDMTRRVNDQQFITCGE----- 333 (454)
Q Consensus 271 ~~~~~--v~~~~~~~~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~--~i~~~~~~~~~~l~~~~~----- 333 (454)
....+ -.+++.. ++.+++.|+.+ ..+.+||+.+..-........ .-..+...++..++.|+.
T Consensus 84 ~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 84 PLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp CBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred CCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence 11111 1122222 56677777743 458899998876543322111 112333456667777775
Q ss_pred -CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC-----cEEEEEcCCCceeeEeccCCC
Q psy17902 334 -DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG-----CVKLWKITPKRTLEFLQDIPL 407 (454)
Q Consensus 334 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg-----~v~iwd~~~~~~~~~~~~~~~ 407 (454)
-..+.+||+.+..-...-..... .....++. -++.+++.|+.++ .+.+||+.+.. ...+...+.
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~-------r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~ 232 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTA-------RSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNK-WAPFEAFPQ 232 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSC-------CBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTE-EEEECCCSS
T ss_pred ccceEEEEeCCCCeEEECCCCCCc-------hhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCe-EEECCCCCC
Confidence 24688999876532221111110 00012222 2667777777654 48889987763 333333222
Q ss_pred ceeeeEEEEcCCCCEEEEEecC
Q psy17902 408 SGVINSLVFTSDHKHLVAGIGT 429 (454)
Q Consensus 408 ~~~v~~l~~s~d~~~l~~~~~~ 429 (454)
...-.+++.. +++.++.| |.
T Consensus 233 ~r~~~~~~~~-~~~l~v~G-G~ 252 (315)
T 4asc_A 233 ERSSLSLVSL-VGTLYAIG-GF 252 (315)
T ss_dssp CCBSCEEEEE-TTEEEEEE-EE
T ss_pred cccceeEEEE-CCEEEEEC-Cc
Confidence 2222223332 45555655 44
No 327
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.49 E-value=0.032 Score=49.87 Aligned_cols=155 Identities=10% Similarity=0.128 Sum_probs=87.5
Q ss_pred eeEEEeecCCCEEEEe------------eCCCcEEEeeccC--CeEE--EEcc--------ccCCeEEEEecCCC-EEEE
Q psy17902 276 ITSLDILAKNRVISSG------------GTDKSVRVWKIQE--ESQL--VFNG--------HSRGIDMTRRVNDQ-QFIT 330 (454)
Q Consensus 276 v~~~~~~~~~~~l~~~------------~~dg~i~i~d~~~--~~~~--~~~~--------~~~~i~~~~~~~~~-~l~~ 330 (454)
.-.+.+.|+|..++++ ..+|.|.++|+.+ .+.. .+.+ +...+......++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 4556667766444443 1689999999873 2322 3322 22222222211333 3444
Q ss_pred E-eC--CCCEEEEecCCCccceeee-cccCCCCCCCCCCcEEEEEEecCCCEEEEecC-----------------CCcEE
Q psy17902 331 C-GE--DGTLSLWSILKKVPTHTIP-VAHGYDSSSSEPNWITSVACLHNSDLVASGSY-----------------DGCVK 389 (454)
Q Consensus 331 ~-~~--dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~-----------------dg~v~ 389 (454)
+ .. +.+|.+|++........+. ...+. .-...+.+.+.++|.+.++... .|.|.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~-----~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK-----LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCT-----TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccC-----CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 4 33 5678888775542222211 11111 2234899999999998777541 23444
Q ss_pred EEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeeeeeeC
Q psy17902 390 LWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIK 440 (454)
Q Consensus 390 iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W~~~~ 440 (454)
.++ .++ +..+.. .-...+.++||||++.|+++-+..++|.+|+...
T Consensus 207 r~d--~~~-~~~~~~--~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 207 YYS--PND-VRVVAE--GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEC--TTC-CEEEEE--EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEE--CCe-EEEeec--CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 444 343 222221 2345789999999999999877788999998764
No 328
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.43 E-value=0.056 Score=47.76 Aligned_cols=223 Identities=8% Similarity=0.019 Sum_probs=110.0
Q ss_pred EEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecC----CC-------cEEEEeCCCccE
Q psy17902 156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDN----NS-------NIKLWSSSLEHL 224 (454)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~v~vw~~~~~~~ 224 (454)
+++.|+. .+.+||..+.+-.. .... .........+...++.+++.|+. ++ .+.+||.....-
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~-~~~~----~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYL-TALA----EQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEE-EEEC----TTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred hhhcccc--ceEEECCCCCceec-ccCC----ccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 3444443 47888888765432 1110 00111222233457778888873 12 167788744333
Q ss_pred Eeecc---cCCCeEEEEEcCCCCEEEEEeCC-------CcEEEEeCCCceeEEEeeccCCce-eEEEeecCCCEEEEeeC
Q psy17902 225 HTFTG---HKAPITGLAISFECDTLYSSSND-------RSIKVWNIEDRAYVETLFGHQSAI-TSLDILAKNRVISSGGT 293 (454)
Q Consensus 225 ~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-------g~i~iwd~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~ 293 (454)
..+.. .......+.+ ++..++.|+.+ ..+.+||+.+.+....-....... .+++. .++.+++.|+.
T Consensus 91 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~ 167 (318)
T 2woz_A 91 VGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGK 167 (318)
T ss_dssp EECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCE
T ss_pred EECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCC
Confidence 33221 1111122222 56677777754 358889988765432211111111 12222 36677777764
Q ss_pred ------CCcEEEeeccCCeEEEEccccCC--eEEEEecCCCEEEEEeCC-----CCEEEEecCCCccceeeecccCCCCC
Q psy17902 294 ------DKSVRVWKIQEESQLVFNGHSRG--IDMTRRVNDQQFITCGED-----GTLSLWSILKKVPTHTIPVAHGYDSS 360 (454)
Q Consensus 294 ------dg~i~i~d~~~~~~~~~~~~~~~--i~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~ 360 (454)
-..+.+||+.+..-........+ ...+...++..++.|+.+ ..+.+||+.+..-...-.....
T Consensus 168 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~---- 243 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQE---- 243 (318)
T ss_dssp ESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSC----
T ss_pred CCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCc----
Confidence 23589999988765543322211 123334466677777643 3467888876532221111110
Q ss_pred CCCCCcEEEEEEecCCCEEEEecCC--------------CcEEEEEcCCCc
Q psy17902 361 SSEPNWITSVACLHNSDLVASGSYD--------------GCVKLWKITPKR 397 (454)
Q Consensus 361 ~~~~~~i~~~~~s~~~~~l~~~~~d--------------g~v~iwd~~~~~ 397 (454)
......+ ..++.+++.|+.+ ..|.+||+.+.+
T Consensus 244 ---r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 289 (318)
T 2woz_A 244 ---RSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKE 289 (318)
T ss_dssp ---CBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTE
T ss_pred ---ccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCE
Confidence 0001222 2356777777754 357788887754
No 329
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.35 E-value=0.16 Score=51.10 Aligned_cols=264 Identities=12% Similarity=0.117 Sum_probs=149.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCC
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSL 221 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~ 221 (454)
...|.++....++ .|..|+.+| +..||..+..... .. ......|.++.. .++. |..|+.+ -|..++...
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~--~~----~~~~~~i~~i~~-~~g~-lWigt~~-Gl~~~~~~~ 130 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ--PE----TDFPTDVRTMAL-QGDT-LWLGALN-GLYTYQLQS 130 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC--CS----CCCCSCEEEEEE-ETTE-EEEEETT-EEEEEETTT
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC--cc----cCCCceEEEEEe-cCCc-EEEEcCC-cceeEeCCC
Confidence 4568998877665 677777665 7889987654322 10 012235777654 3554 5555555 578888855
Q ss_pred ccEEeec-----ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeec-----cCCceeEEEeecCCCEEEEe
Q psy17902 222 EHLHTFT-----GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFG-----HQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 222 ~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~ 291 (454)
..+..+. .....|.++....++. |..|+..| |..++..++........ ....|.++...+++..|..|
T Consensus 131 ~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 131 RKLTSFDTRRNGLPNNTIYSIIRTKDNQ-IYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp CCEEEECHHHHCCSCSCEEEEEECTTCC-EEEEETTE-EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred CeEEEeccCCCCcCCCeEEEEEEcCCCC-EEEEeCCC-HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEE
Confidence 4444441 1234688888776665 44456555 78888877654321111 12248888887777765556
Q ss_pred eCCCcEEEeeccCCeEEEEcc-ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEE
Q psy17902 292 GTDKSVRVWKIQEESQLVFNG-HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSV 370 (454)
Q Consensus 292 ~~dg~i~i~d~~~~~~~~~~~-~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 370 (454)
+. +-+..++..++....+.. ....|.++.....+.|..|+.+ -+.+++..+.... .+..... ....-....|.++
T Consensus 209 t~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~-Gl~~~~~~~~~~~-~~~~~~~-~~~~l~~~~i~~i 284 (758)
T 3ott_A 209 TE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAGTDN-GLYVYHNDTTPLQ-HIIHDSR-NIQSLTNNIIWNI 284 (758)
T ss_dssp EE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEEETT-EEEEECCTTSCCE-EECCCTT-CTTSCSCSCEEEE
T ss_pred EC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEEeCC-ceeEEecCCCcEE-EEEcCCC-CcCcCCcCeEEEE
Confidence 54 458888887765442221 2233555555556667777754 4888887665332 2211110 0011123459999
Q ss_pred EEecCCCEEEEecCCCcEEEEEcCCCceeeEec-----cCCCceeeeEEEEcCCCCEEEEE
Q psy17902 371 ACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQ-----DIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 371 ~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-----~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
....+|.+-+ |+..| +.++.... ....+. .......|.++.-.++|...+.+
T Consensus 285 ~~D~~g~lWi-GT~~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt 341 (758)
T 3ott_A 285 FADQEHNIWL-GTDYG-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG 341 (758)
T ss_dssp EECTTCCEEE-EESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE
T ss_pred EEcCCCCEEE-EeCCc-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee
Confidence 9888887443 44456 55543321 222111 01123468888888888766654
No 330
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.31 E-value=0.084 Score=47.17 Aligned_cols=194 Identities=12% Similarity=0.128 Sum_probs=100.8
Q ss_pred CeEEEEEcCCCCEEEEE------------eCCCcEEEEeCCCc--eeE-EEeec-----cCCceeEEEeec--CCC-EEE
Q psy17902 233 PITGLAISFECDTLYSS------------SNDRSIKVWNIEDR--AYV-ETLFG-----HQSAITSLDILA--KNR-VIS 289 (454)
Q Consensus 233 ~v~~~~~~~~~~~l~~~------------~~dg~i~iwd~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~~~-~l~ 289 (454)
..-.+...|+|..++++ ..+|.|.++|+.+. +.. ..+.+ .......|.+.+ ++. +|+
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~ 130 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLL 130 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEE
Confidence 34455666665443333 26899999998732 221 12222 223567777766 343 343
Q ss_pred Ee-eC--CCcEEEeeccCC--eEE---EEcccc-CCeEEEE-ecCCCEEEEEe-----------------CCCCEEEEec
Q psy17902 290 SG-GT--DKSVRVWKIQEE--SQL---VFNGHS-RGIDMTR-RVNDQQFITCG-----------------EDGTLSLWSI 342 (454)
Q Consensus 290 ~~-~~--dg~i~i~d~~~~--~~~---~~~~~~-~~i~~~~-~~~~~~l~~~~-----------------~dg~i~iwd~ 342 (454)
++ .. +..|.+|++... ... .+.+.. ...+.+. .+++.++++.. ..|.|..|+.
T Consensus 131 Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~ 210 (355)
T 3sre_A 131 VVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP 210 (355)
T ss_dssp EEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT
T ss_pred EEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC
Confidence 33 33 467788877653 222 222211 1223333 34444444432 1244555554
Q ss_pred CCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEe-cCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcC-CC
Q psy17902 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASG-SYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTS-DH 420 (454)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~-~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~-d~ 420 (454)
+. +..+.... ...+.++|+|+++.|+++ +..+.|..|++.....+.........+..-.+++.+ +|
T Consensus 211 --~~-~~~~~~~l---------~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G 278 (355)
T 3sre_A 211 --ND-VRVVAEGF---------DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTG 278 (355)
T ss_dssp --TC-CEEEEEEE---------SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTC
T ss_pred --Ce-EEEeecCC---------cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCC
Confidence 22 22221111 127899999999866655 457889999986432222111111346678899999 59
Q ss_pred CEEEEEecCCCceeeeee
Q psy17902 421 KHLVAGIGTEHRFGRWKT 438 (454)
Q Consensus 421 ~~l~~~~~~d~~i~~W~~ 438 (454)
.+.+++.-..++|..|+.
T Consensus 279 ~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 279 DLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp CEEEEEESCHHHHHSCCT
T ss_pred cEEEEecCCceEEEEECC
Confidence 877766223345555543
No 331
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.27 E-value=0.021 Score=51.62 Aligned_cols=145 Identities=12% Similarity=0.138 Sum_probs=93.1
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc-------
Q psy17902 151 TSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS-LE------- 222 (454)
Q Consensus 151 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~------- 222 (454)
+.+|..|+++- ++.||.-++......+.+.... .-....|..+..+|+|++||..+. ..|.|..+. +.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~--~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSR--HLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTT--TCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCc--ccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence 34566666654 4788888877543332222110 002235778999999999999874 578888873 21
Q ss_pred -----cEEeecc------cCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCce--eEEEee---------ccCCcee
Q psy17902 223 -----HLHTFTG------HKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDRA--YVETLF---------GHQSAIT 277 (454)
Q Consensus 223 -----~~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~~--~~~~~~---------~~~~~v~ 277 (454)
....+.- ...+|..+.|+|- +..|++-..|+.|++||+.... +. .+. .....|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 0112221 2567999999994 5789999999999999997521 11 221 2235688
Q ss_pred EEEeecCCCEEEE--eeCCCcEEEe
Q psy17902 278 SLDILAKNRVISS--GGTDKSVRVW 300 (454)
Q Consensus 278 ~~~~~~~~~~l~~--~~~dg~i~i~ 300 (454)
+++|.+++-.|.. .+..|.|+-.
T Consensus 184 S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 184 DLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEEcCCCcEEEEEecCCCCCEEEE
Confidence 9999987755555 4477777654
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.27 E-value=0.12 Score=48.15 Aligned_cols=110 Identities=14% Similarity=0.136 Sum_probs=61.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceec--ccCCcccCCCCCCceEEEEEeCC---CcEEEEecC------
Q psy17902 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVC--SSPFVKTDRKSYPPILALAVANN---NELVASGDN------ 210 (454)
Q Consensus 142 ~~~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~------ 210 (454)
-.....|+|.|+|+++++-...+.|++++..++.... .+...............|+|+|+ +.+|+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 3457899999999877765444578888765444321 11111000113457889999995 444444432
Q ss_pred -------CCcEEEEeCCC--------ccEE-eec-ccCCCeEEEEEcCCCCEEEEEeC
Q psy17902 211 -------NSNIKLWSSSL--------EHLH-TFT-GHKAPITGLAISFECDTLYSSSN 251 (454)
Q Consensus 211 -------dg~v~vw~~~~--------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~~ 251 (454)
...|.-|+.+. +.+. .+. ........|+|.|+|.++++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 12455555421 1111 121 11234789999999987777553
No 333
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.25 E-value=0.015 Score=60.76 Aligned_cols=235 Identities=11% Similarity=0.126 Sum_probs=139.8
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC--CccE
Q psy17902 147 CIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS--LEHL 224 (454)
Q Consensus 147 ~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~--~~~~ 224 (454)
+.-.+|..+.||.-. ..++.|+|+++...+....+ ..+|.-=.|-.... |+..+ +..|.-|++. ..++
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-------~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~ 139 (1630)
T 1xi4_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-------TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPV 139 (1630)
T ss_pred hhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-------CCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccH
Confidence 344688888887765 68999999999887776653 23455555654443 44333 3689999993 4555
Q ss_pred Eeeccc----CCCeEEEEEcCCCCEEEEEe-------CCCcEEEEeCCCceeEEEeeccCCceeEEEee--cCC-CEEEE
Q psy17902 225 HTFTGH----KAPITGLAISFECDTLYSSS-------NDRSIKVWNIEDRAYVETLFGHQSAITSLDIL--AKN-RVISS 290 (454)
Q Consensus 225 ~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~-~~l~~ 290 (454)
..+..| ...|..-..+++.+.++..| -.|.+.+|+++.+. .+.+.||......+... +.. .+++.
T Consensus 140 k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheeccCCCCCCceEEEE
Confidence 555444 45666777788888776543 35889999987543 34556676555444442 111 23322
Q ss_pred eeC---CCcEEEeeccCC---e-EE-------EEcc---ccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902 291 GGT---DKSVRVWKIQEE---S-QL-------VFNG---HSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 291 ~~~---dg~i~i~d~~~~---~-~~-------~~~~---~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 353 (454)
+.. .+.++|.++... . .. .+.. ..-++..-.+..-+.+...+.-|.|.+||+.++.++..-..
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccc
Confidence 221 267888887543 1 11 1111 12234444455567788889999999999999988876654
Q ss_pred ccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeE
Q psy17902 354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEF 401 (454)
Q Consensus 354 ~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~ 401 (454)
... .|...+.+....-+++....|.|.-..+.....+..
T Consensus 299 s~~---------~iF~~~~~~~~~g~~~vnr~G~vl~v~v~~~~iv~y 337 (1630)
T 1xi4_A 299 SGE---------TIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPY 337 (1630)
T ss_pred cCC---------ceEEeccCCCCCceEEEcCCceEEEEEEccchhhhh
Confidence 322 133333333322333444667666666665544433
No 334
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.15 E-value=0.11 Score=45.41 Aligned_cols=196 Identities=11% Similarity=0.058 Sum_probs=106.6
Q ss_pred eCCCcEEEEec--CCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCC--------------CcEEEEeCCC
Q psy17902 199 ANNNELVASGD--NNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSND--------------RSIKVWNIED 262 (454)
Q Consensus 199 ~~~~~~l~~~~--~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~i~iwd~~~ 262 (454)
+.++.+|+... .++.|...+.++.....+.... +--+++++..|+-+... ..|+..++..
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 34566666553 2466777777666555554322 33557888888766542 4677778776
Q ss_pred ceeEEEeeccCCceeEEEeecCCCEEEEee----CCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEe-CCCCE
Q psy17902 263 RAYVETLFGHQSAITSLDILAKNRVISSGG----TDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCG-EDGTL 337 (454)
Q Consensus 263 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i 337 (454)
..... +.. .. +..|+++++.|+-.. ....|+..++.......+..+.. . . +.+.++.|+-.+ ....|
T Consensus 98 ~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~-~-~-~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 98 HGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL-F-T-CNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC-C-C-SEEETTEEEEECTTTCCE
T ss_pred CcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc-e-E-eeEECCEEEEEeCCCceE
Confidence 65332 221 11 236677888877665 23455555665444433333322 1 1 133455555444 46788
Q ss_pred EEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC--CcEEEEEcCCCceeeEeccCCCceeeeEEE
Q psy17902 338 SLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD--GCVKLWKITPKRTLEFLQDIPLSGVINSLV 415 (454)
Q Consensus 338 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~ 415 (454)
.+.++..+.....+. +. .. ..++|++.+|+-.... ..|..-++.... ...+.. ..+ ..
T Consensus 170 y~~~l~g~~~~~l~~---~~---------~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~----~~~--~~ 229 (302)
T 3s25_A 170 YRYDTASQSEALFYD---CN---------CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLTE----ANI--EH 229 (302)
T ss_dssp EEEETTTTEEEEEEC---SC---------EE-EEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECSC----SCE--EE
T ss_pred EEEECCCCCEEEEeC---CC---------cc-ceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEeC----CCc--ce
Confidence 888876654332221 10 22 3466888877765543 345555555443 333332 122 34
Q ss_pred EcCCCCEEEEE
Q psy17902 416 FTSDHKHLVAG 426 (454)
Q Consensus 416 ~s~d~~~l~~~ 426 (454)
|+|++.+|+.+
T Consensus 230 ~~~~g~~Iy~~ 240 (302)
T 3s25_A 230 YNVYGSLIFYQ 240 (302)
T ss_dssp EEEETTEEEEE
T ss_pred EEECCCEEEEE
Confidence 78888888765
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.15 E-value=0.016 Score=51.43 Aligned_cols=142 Identities=11% Similarity=0.111 Sum_probs=82.1
Q ss_pred cEEEEecCCCcEEEEeC-CCccEEeeccc-CCCeEEEEEc--CCCCEEEEE--eCCCcEEEEeCCCceeEEEeec----c
Q psy17902 203 ELVASGDNNSNIKLWSS-SLEHLHTFTGH-KAPITGLAIS--FECDTLYSS--SNDRSIKVWNIEDRAYVETLFG----H 272 (454)
Q Consensus 203 ~~l~~~~~dg~v~vw~~-~~~~~~~~~~~-~~~v~~~~~~--~~~~~l~~~--~~dg~i~iwd~~~~~~~~~~~~----~ 272 (454)
.++++++.||.|.-+|. +++.+.++... ..++....-. +.+..++.+ +.||.|..++..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46888899999999998 77777777643 1222221100 112234444 5899999999998865544431 1
Q ss_pred CCceeE---EEe-e----cCCCEEEEeeCCCcEEEeeccCCeEE-EEccccC-C------eEEEEe------cCCCEEEE
Q psy17902 273 QSAITS---LDI-L----AKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSR-G------IDMTRR------VNDQQFIT 330 (454)
Q Consensus 273 ~~~v~~---~~~-~----~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~-~------i~~~~~------~~~~~l~~ 330 (454)
..++.. ..+ . ..+..+++|+.+|.+...|+.+++.+ .+..... . ..|... ..++.++.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 222221 000 0 14567888999999999999999988 3332211 1 011111 12356777
Q ss_pred EeCCCCEEEEecCCC
Q psy17902 331 CGEDGTLSLWSILKK 345 (454)
Q Consensus 331 ~~~dg~i~iwd~~~~ 345 (454)
+..+..+.+.+ +++
T Consensus 171 g~~~y~v~~~~-~sG 184 (339)
T 2be1_A 171 GKTIFELGIHS-YDG 184 (339)
T ss_dssp EEEEEECEECC-TTS
T ss_pred ecceEEEEEEC-CCC
Confidence 77777677666 344
No 336
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.004 Score=55.19 Aligned_cols=189 Identities=10% Similarity=0.062 Sum_probs=101.0
Q ss_pred CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEE---eCCCcEEEEe-cCCCcEEEEeC-CCccEEeecc
Q psy17902 155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV---ANNNELVASG-DNNSNIKLWSS-SLEHLHTFTG 229 (454)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~~~l~~~-~~dg~v~vw~~-~~~~~~~~~~ 229 (454)
.++++++.||.|.-+|..+++....+... ...++....- ..++..++.. +.||.|..++. ++.....+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-----~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~ 85 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-----NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSI 85 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-----GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-----ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecc
Confidence 57889999999999999999888777642 0011111100 0123334343 57899988887 3422222211
Q ss_pred ----cCCCeEE---EEE-----cCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC--Cc-----eeEEEee-----cCC
Q psy17902 230 ----HKAPITG---LAI-----SFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ--SA-----ITSLDIL-----AKN 285 (454)
Q Consensus 230 ----~~~~v~~---~~~-----~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~-----v~~~~~~-----~~~ 285 (454)
...++.. ... ...+..+++|+.+|.+...|+.+|+.+..+.... .. ..|.... ..+
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~ 165 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECE 165 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------C
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCC
Confidence 1122221 000 0145688999999999999999999998875321 10 1111111 123
Q ss_pred CEEEEeeCCCcEEEeeccCCeEE--EE---ccccCC--eE-EEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902 286 RVISSGGTDKSVRVWKIQEESQL--VF---NGHSRG--ID-MTRRVNDQQFITCGEDGTLSLWSILKKVPTH 349 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~~~~~~--~~---~~~~~~--i~-~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 349 (454)
..|+.+..+..+.+.+ +++..- .+ ...... +. ......++.+++++.||.|.-+|..++..+.
T Consensus 166 ~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 166 NMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMCIAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp CEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCCEEEETTTEEEEECSTTCCEEE
T ss_pred CeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcEEEECCCCEEEEEECCCCcEEE
Confidence 5677777777777766 333311 11 000000 00 0000012334567888888888888877665
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.10 E-value=0.012 Score=47.96 Aligned_cols=178 Identities=10% Similarity=-0.066 Sum_probs=92.9
Q ss_pred CCEEEEEeCCCcEEEEeCCCce------eEEEeecc--CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEcccc
Q psy17902 243 CDTLYSSSNDRSIKVWNIEDRA------YVETLFGH--QSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHS 314 (454)
Q Consensus 243 ~~~l~~~~~dg~i~iwd~~~~~------~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 314 (454)
..+|++...| +|+.=...... ....+ +. =..+..++|+|++.+.++ .+|.++-.+..+.......+..
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 4566777777 66655544433 11122 22 236789999998886665 7777777666442222111111
Q ss_pred CC--------eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCC
Q psy17902 315 RG--------IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDG 386 (454)
Q Consensus 315 ~~--------i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg 386 (454)
.. ...+.+.++..|.++ .||.|+-++-.+.....-+...... ...-=..+..|.|.|+|.+.++. |+
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~~~Wl~~a~~v--g~~gw~~~~~lff~p~G~Lyav~--dg 154 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDTDNWIARATEV--GSGGWSGFKFLFFHPNGYLYAVH--GQ 154 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHSEEE--ECSSGGGEEEEEECTTSCEEEEE--TT
T ss_pred cEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCCCCceeccccEe--ccCCCCceEEEEECCCceEEEEe--CC
Confidence 11 355666665556555 6698888875432221111000000 00000228999999999877776 77
Q ss_pred cEEEEEcCCCcee------eEeccCCCceeeeEEEEcCCCCEEEEEecCCCce
Q psy17902 387 CVKLWKITPKRTL------EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRF 433 (454)
Q Consensus 387 ~v~iwd~~~~~~~------~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i 433 (454)
.++-+...++... ..+.. ..-....-+.|.|+|...++. ++.+
T Consensus 155 ~lyr~~~P~~~~~~wl~~~~~~g~-~g~~~yr~l~f~~~G~l~~v~---~g~~ 203 (236)
T 1tl2_A 155 QFYKALPPVSNQDNWLARATKIGQ-GGWDTFKFLFFSSVGTLFGVQ---GGKF 203 (236)
T ss_dssp EEEEECCCSSTTCCHHHHCEEEES-SSGGGEEEEEECTTSCEEEEE---TTEE
T ss_pred cEEecCCCCCCCcccccccceecc-CCcceEEEEEECCCCcEEEEe---CCeE
Confidence 7544333222111 11110 111234446799999877766 5544
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.10 E-value=0.13 Score=45.30 Aligned_cols=212 Identities=12% Similarity=0.112 Sum_probs=101.9
Q ss_pred cEEEEecCCCcEEEEeCCCccEEee--cccCCCeEEEEEcCCCCEEEEEeC----CC-------cEEEEeCCCceeEEE-
Q psy17902 203 ELVASGDNNSNIKLWSSSLEHLHTF--TGHKAPITGLAISFECDTLYSSSN----DR-------SIKVWNIEDRAYVET- 268 (454)
Q Consensus 203 ~~l~~~~~dg~v~vw~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~----dg-------~i~iwd~~~~~~~~~- 268 (454)
.+++.|+. .+.+||.....-... ..........+...++..++.|+. ++ .+.+||..+.+....
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 34555553 478888843332221 111112222233456777788773 12 277889887654322
Q ss_pred -eeccCCceeEEEeecCCCEEEEeeCC-------CcEEEeeccCCeEEEEccccCCe--EEEEecCCCEEEEEeC-----
Q psy17902 269 -LFGHQSAITSLDILAKNRVISSGGTD-------KSVRVWKIQEESQLVFNGHSRGI--DMTRRVNDQQFITCGE----- 333 (454)
Q Consensus 269 -~~~~~~~v~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~i--~~~~~~~~~~l~~~~~----- 333 (454)
+...... .+++.. ++.+++.|+.+ ..+.+||+.+..-.......... ..+...++..++.|+.
T Consensus 95 ~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 95 PLPSARCL-FGLGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CBSSCBCS-CEEEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSC
T ss_pred CCCccccc-cceEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCC
Confidence 1111111 222222 56777777754 25788898877655433222111 2233345666666663
Q ss_pred -CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC-----CcEEEEEcCCCceeeEeccCCC
Q psy17902 334 -DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD-----GCVKLWKITPKRTLEFLQDIPL 407 (454)
Q Consensus 334 -dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~ 407 (454)
-..+.+||+.+..-...-..... .. -.+++. -++.+++.|+.+ ..+.+||+.+.. ...+...+.
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~------r~--~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~ 242 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTP------RS--MFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNK-WEVMTEFPQ 242 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSC------CB--SCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCC-EEECCCCSS
T ss_pred ccceEEEEcCCCCEEEECCCCCCC------cc--cceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCe-EEECCCCCC
Confidence 24588999877542222111110 00 112222 266777777653 357789987763 333333222
Q ss_pred ceeeeEEEEcCCCCEEEEEecCC
Q psy17902 408 SGVINSLVFTSDHKHLVAGIGTE 430 (454)
Q Consensus 408 ~~~v~~l~~s~d~~~l~~~~~~d 430 (454)
...-.+++. .+++.++.| |.+
T Consensus 243 ~r~~~~~~~-~~~~i~v~G-G~~ 263 (318)
T 2woz_A 243 ERSSISLVS-LAGSLYAIG-GFA 263 (318)
T ss_dssp CCBSCEEEE-ETTEEEEEC-CBC
T ss_pred cccceEEEE-ECCEEEEEC-Cee
Confidence 221222332 245555555 543
No 339
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=97.02 E-value=0.14 Score=44.29 Aligned_cols=222 Identities=16% Similarity=0.167 Sum_probs=115.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC-Cc
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS-LE 222 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~ 222 (454)
.|..++.... ..++. . ||.|..|-......+.. +. .....|..++..... .++. . ||.|..|-.. ..
T Consensus 25 ~i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~-p~-----~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~G 92 (282)
T 3qhy_B 25 GVDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTM-PA-----ATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDG 92 (282)
T ss_dssp SCCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSC-CG-----GGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTS
T ss_pred CCcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCC-Cc-----cCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCC
Confidence 4777776553 23333 5 89999997654332221 11 122357777765443 3333 4 8999999862 21
Q ss_pred cEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEeec
Q psy17902 223 HLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKI 302 (454)
Q Consensus 223 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~ 302 (454)
.+-....-...|..++.... +.+.-. +|.|+.|-....-.+.........|..++......++ -. ||.|+.|-.
T Consensus 93 qlg~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~ 166 (282)
T 3qhy_B 93 QTTVPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGD 166 (282)
T ss_dssp TTCCCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEEC
T ss_pred CCCCCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecC
Confidence 21111112346777777643 344445 8999999765432221111223457666654332222 23 788999876
Q ss_pred cCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCCEEEE
Q psy17902 303 QEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381 (454)
Q Consensus 303 ~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 381 (454)
....++ ........+..+..-....++. .+|.|..|-......+.. +... ...|..++..... .++.
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs~al--~~G~v~~wG~n~~gqlg~-p~~~--------~~~v~~i~~G~~h-~~al 234 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHSLAL--KDGKVIAWGDNRYKQTTV-PTEA--------LSGVSAIASGEWY-SLAL 234 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEEEEE--ETTEEEEEECCTTSTTCC-CGGG--------GSSCCEEEECSSC-EEEE
T ss_pred CCCCCCCCceecCCCeEEEEecCCEEEEE--ECCeEEEEECCCCCCCCC-Cccc--------CCCceEEEcCCCE-EEEE
Confidence 543322 1111123444444433334444 599999997654322211 1100 1126666654433 3333
Q ss_pred ecCCCcEEEEEcCCCc
Q psy17902 382 GSYDGCVKLWKITPKR 397 (454)
Q Consensus 382 ~~~dg~v~iwd~~~~~ 397 (454)
. ||.|..|=.....
T Consensus 235 ~--~g~v~~wG~n~~g 248 (282)
T 3qhy_B 235 K--NGKVIAWGSSRTA 248 (282)
T ss_dssp E--TTEEEEESTTCCC
T ss_pred E--CCEEEEecCCCCc
Confidence 3 8999999766543
No 340
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.01 E-value=0.045 Score=49.51 Aligned_cols=150 Identities=12% Similarity=0.062 Sum_probs=90.8
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCceeEEEeecc----CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe---------
Q psy17902 240 SFECDTLYSSSNDRSIKVWNIEDRAYVETLFGH----QSAITSLDILAKNRVISSGGTDKSVRVWKIQEES--------- 306 (454)
Q Consensus 240 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------- 306 (454)
+.++..++.+- ++.||.-++.....-+.+... -..|..+..+|+|++|+..+ +..|.|..+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 34555555553 467777777644333333322 23678899999999998875 5578888877321
Q ss_pred ----EEEEcc------ccCCeEEEEecC----CCEEEEEeCCCCEEEEecCCCccce-eeecccCCCCCCCCCCcEEEEE
Q psy17902 307 ----QLVFNG------HSRGIDMTRRVN----DQQFITCGEDGTLSLWSILKKVPTH-TIPVAHGYDSSSSEPNWITSVA 371 (454)
Q Consensus 307 ----~~~~~~------~~~~i~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~ 371 (454)
...+.- ...+|..+.|++ +..|++-..|+.|++||+....... .+......-+.......|.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 111211 134566666664 6789999999999999997632111 2221111001112235599999
Q ss_pred EecCCCEEEE--ecCCCcEEEE
Q psy17902 372 CLHNSDLVAS--GSYDGCVKLW 391 (454)
Q Consensus 372 ~s~~~~~l~~--~~~dg~v~iw 391 (454)
|.+++-.|.+ .+..|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 9997765555 5577887653
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.95 E-value=0.097 Score=47.03 Aligned_cols=140 Identities=8% Similarity=0.105 Sum_probs=73.7
Q ss_pred CCcEEEEecCC-CcEEEEeCCC--ccEEeecc----cCCCeEEEEEcCCCCEEEEEeC-C---------CcEEEEeCCCc
Q psy17902 201 NNELVASGDNN-SNIKLWSSSL--EHLHTFTG----HKAPITGLAISFECDTLYSSSN-D---------RSIKVWNIEDR 263 (454)
Q Consensus 201 ~~~~l~~~~~d-g~v~vw~~~~--~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~-d---------g~i~iwd~~~~ 263 (454)
++.+++.|+.+ ..+.+||+.. ..-..+.. ......++.+ ++.+++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 66676777643 4688888742 22222221 1111222222 5667777765 2 46889999876
Q ss_pred eeEEEeecc-CCceeEEEeecCCCEEEEeeCC---------------------------------------CcEEEeecc
Q psy17902 264 AYVETLFGH-QSAITSLDILAKNRVISSGGTD---------------------------------------KSVRVWKIQ 303 (454)
Q Consensus 264 ~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d---------------------------------------g~i~i~d~~ 303 (454)
+....-... .......+...++.+++.|+.+ ..+.+||..
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~ 176 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPS 176 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETT
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCC
Confidence 543221111 1111111222467777878754 578899998
Q ss_pred CCeEEEEcccc--CCe-EEEEecCCCEEEEEeC------CCCEEEEec
Q psy17902 304 EESQLVFNGHS--RGI-DMTRRVNDQQFITCGE------DGTLSLWSI 342 (454)
Q Consensus 304 ~~~~~~~~~~~--~~i-~~~~~~~~~~l~~~~~------dg~i~iwd~ 342 (454)
+..-....... ... ..+...++..++.|+. ...+.+||+
T Consensus 177 ~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 177 TQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp TTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 87655332211 111 3344446666666653 345777876
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.94 E-value=0.013 Score=47.73 Aligned_cols=146 Identities=9% Similarity=-0.095 Sum_probs=79.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCC-cccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC-C-
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPF-VKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS-S- 220 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~-~- 220 (454)
.+..++|+|+|.+.++ .+|.+.-.+..+.....-+.. .......-....++.|.++|.+.++ .||.|+-++. +
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 5779999999886666 677765555433111100000 0000000111378899999988777 4598887776 2
Q ss_pred CccEE-----ee-cccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCcee------EEEee-ccCCceeEEEeecCCCE
Q psy17902 221 LEHLH-----TF-TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY------VETLF-GHQSAITSLDILAKNRV 287 (454)
Q Consensus 221 ~~~~~-----~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~------~~~~~-~~~~~v~~~~~~~~~~~ 287 (454)
+..-. .+ ..-=..+..|.|.|+|.+.++. |+.++-+...+... ...+- ..-...+.+.|.+++.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 21111 00 1111467899999999776666 78765443332210 11111 22223445668888877
Q ss_pred EEEeeCCCcE
Q psy17902 288 ISSGGTDKSV 297 (454)
Q Consensus 288 l~~~~~dg~i 297 (454)
.++. ++.+
T Consensus 196 ~~v~--~g~~ 203 (236)
T 1tl2_A 196 FGVQ--GGKF 203 (236)
T ss_dssp EEEE--TTEE
T ss_pred EEEe--CCeE
Confidence 6655 6633
No 343
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.81 E-value=0.22 Score=43.43 Aligned_cols=242 Identities=8% Similarity=-0.009 Sum_probs=130.4
Q ss_pred cCCCCEEEEEe--CCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCC--------------CcE
Q psy17902 151 TSDSKHVYSAC--KDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNN--------------SNI 214 (454)
Q Consensus 151 s~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------g~v 214 (454)
++++..|+... .++.|...+.+...... +. .-.+-.+++++.+|+.+... ..|
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~-l~----------~~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~I 90 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHK-LS----------NDTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSL 90 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEE-EE----------EEEEEEEEECSSEEEEEEECC------CCSSCCSEEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEE-cc----------CCceeeEEEcCCEEEEEECCCCcccccceeccCCCeE
Confidence 34666776664 24666666665443222 11 12234567888888877543 356
Q ss_pred EEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEe----CCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEEE
Q psy17902 215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSS----NDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISS 290 (454)
Q Consensus 215 ~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 290 (454)
+..++.+.....+.... +..|+++++.|+-.. ....|+..++.... ...+..+.. ..++++++.|+-
T Consensus 91 y~i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~ 161 (302)
T 3s25_A 91 CRIKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYY 161 (302)
T ss_dssp EEEETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEE
T ss_pred EEEeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEE
Confidence 77777555444443222 236777888888765 34456666776433 334433332 456777877765
Q ss_pred eeC-CCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCC--CCEEEEecCCCccceeeecccCCCCCCCCCCcE
Q psy17902 291 GGT-DKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGED--GTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWI 367 (454)
Q Consensus 291 ~~~-dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i 367 (454)
.+. ...|.+.++.......+.. .......+|.++.|+-.... ..|..-++.... ...+. ...+
T Consensus 162 t~~g~~~Iy~~~l~g~~~~~l~~--~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~-~~~Lt-----------~~~~ 227 (302)
T 3s25_A 162 NNPKNGQLYRYDTASQSEALFYD--CNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN-PVVLT-----------EANI 227 (302)
T ss_dssp ECTTTCCEEEEETTTTEEEEEEC--SCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-CEECS-----------CSCE
T ss_pred EeCCCceEEEEECCCCCEEEEeC--CCccceeeecCCEEEEEEcCCCcEEEEEECCCCC-eEEEe-----------CCCc
Confidence 554 5688888887765543322 22222344667776655433 345555554332 22221 1113
Q ss_pred EEEEEecCCCEEEEec--CCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902 368 TSVACLHNSDLVASGS--YDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 368 ~~~~~s~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~ 435 (454)
..|+|++.+|+-++ ..+.|..-++.... ...+.. . .+. .+++.+.+|+-+--..+.|..
T Consensus 228 --~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~-r~~l~~--~--~~~--~i~i~~d~Iy~td~~~~~i~~ 288 (302)
T 3s25_A 228 --EHYNVYGSLIFYQRGGDNPALCVVKNDGTG-FKELAK--G--EFC--NINVTSQYVYFTDFVSNKEYC 288 (302)
T ss_dssp --EEEEEETTEEEEEECSSSCEEEEEETTSCC-CEEEEE--S--CEE--EEEECSSEEEEEETTTCCEEE
T ss_pred --ceEEECCCEEEEEECCCCcEEEEEECCCCc-cEEeeC--C--ccc--eEEEeCCEEEEEECCCCeEEE
Confidence 34788888777553 34566666665433 233322 1 133 445567788877334455443
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.80 E-value=0.2 Score=49.63 Aligned_cols=220 Identities=12% Similarity=0.029 Sum_probs=110.4
Q ss_pred CCCcEEEEecCC----CcEEEEeCCCccEEeec---------ccCCCeEEEEEcC-CCCEEEEEeCC------CcEEEEe
Q psy17902 200 NNNELVASGDNN----SNIKLWSSSLEHLHTFT---------GHKAPITGLAISF-ECDTLYSSSND------RSIKVWN 259 (454)
Q Consensus 200 ~~~~~l~~~~~d----g~v~vw~~~~~~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~~d------g~i~iwd 259 (454)
.++.+++.|+.+ ..+.+||.....-..+. .....- +++..+ ++..++.|+.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH-TFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC-EEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce-EEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 466777777753 46788887333222222 111122 233333 67777777753 3578999
Q ss_pred CCCceeEEEeecc-CCceeEEEeecCCCEEEEeeCCC--cEEEeeccCCeEEEEcc------ccCCeEEEEec-C-CCEE
Q psy17902 260 IEDRAYVETLFGH-QSAITSLDILAKNRVISSGGTDK--SVRVWKIQEESQLVFNG------HSRGIDMTRRV-N-DQQF 328 (454)
Q Consensus 260 ~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~------~~~~i~~~~~~-~-~~~l 328 (454)
+.+.+....-... ...-.+++...++.+++.|+.++ .+.+||..+..-..... ......++... . +..+
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8876533221111 11112233324778888887655 68999998877654332 11111223322 2 4466
Q ss_pred EEEeC--C-----CCEEEEecCCCcc-----ceeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCC--------CcE
Q psy17902 329 ITCGE--D-----GTLSLWSILKKVP-----THTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYD--------GCV 388 (454)
Q Consensus 329 ~~~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d--------g~v 388 (454)
+.|+. + ..+.+||+.+..- ...+...... ...-.++....++.+++.|+.+ ..|
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~------~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v 628 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLF------QRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSI 628 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGG------CCBSCEEEEEETTEEEEECCBCSSCCCCTTTSE
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCC------CcccceEEEeCCCEEEEECCccCCCCCCCCCeE
Confidence 66764 2 3588999887762 1111110000 0001123333447777777743 459
Q ss_pred EEEEcCCCceeeEeccCCCc------ee-eeEEEEcCCCCEEEEEe
Q psy17902 389 KLWKITPKRTLEFLQDIPLS------GV-INSLVFTSDHKHLVAGI 427 (454)
Q Consensus 389 ~iwd~~~~~~~~~~~~~~~~------~~-v~~l~~s~d~~~l~~~~ 427 (454)
.+||+.+..-. .+...... .. -.+++..++|+.++.|+
T Consensus 629 ~~yd~~t~~W~-~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 629 ISLDPLSETLT-SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGG 673 (695)
T ss_dssp EEEETTTTEEE-ECCCCHHHHHHSCCCCSSCEEECC---CEEEECC
T ss_pred EEEECCCCeEE-EeeccccccCCCCccceeeeEEEeCCCEEEEEeC
Confidence 99999876433 22210000 00 13445556667777774
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.79 E-value=0.21 Score=49.45 Aligned_cols=195 Identities=10% Similarity=0.096 Sum_probs=102.6
Q ss_pred CCCCEEEEEeCC----CeEEEEEcCCCceeccc-CCcccCCCCCCceEEEEEeC-CCcEEEEecCC------CcEEEEeC
Q psy17902 152 SDSKHVYSACKD----GIIIKWLLETRSKVCSS-PFVKTDRKSYPPILALAVAN-NNELVASGDNN------SNIKLWSS 219 (454)
Q Consensus 152 ~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------g~v~vw~~ 219 (454)
.++.+++.|+.+ ..+.+||..+..-.... +...........-.+++..+ ++.+++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777753 46788888776433221 10000000111112333333 77788888754 35788887
Q ss_pred CCccEEeecccCC--CeEEEEEcCCCCEEEEEeCCC--cEEEEeCCCceeEEEee-----ccCCceeEEEeecC-CCEEE
Q psy17902 220 SLEHLHTFTGHKA--PITGLAISFECDTLYSSSNDR--SIKVWNIEDRAYVETLF-----GHQSAITSLDILAK-NRVIS 289 (454)
Q Consensus 220 ~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~-~~~l~ 289 (454)
....-..+..... .-.+++...++..++.|+.++ .+.+||+.+......-. .......++.+..+ +.+++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 4432222211111 112233324778888887655 69999998876432211 11122233555555 66777
Q ss_pred EeeCC-------CcEEEeeccCCe------EEEEcc---cc-CCeEEEEecCCCEEEEEeC--------CCCEEEEecCC
Q psy17902 290 SGGTD-------KSVRVWKIQEES------QLVFNG---HS-RGIDMTRRVNDQQFITCGE--------DGTLSLWSILK 344 (454)
Q Consensus 290 ~~~~d-------g~i~i~d~~~~~------~~~~~~---~~-~~i~~~~~~~~~~l~~~~~--------dg~i~iwd~~~ 344 (454)
.|+.+ ..+.+||+.+.. ...... .. ....++...++..++.|+. ...|.+||+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 77652 358899998877 222211 11 1223333333667777774 34689999877
Q ss_pred Cc
Q psy17902 345 KV 346 (454)
Q Consensus 345 ~~ 346 (454)
..
T Consensus 636 ~~ 637 (695)
T 2zwa_A 636 ET 637 (695)
T ss_dssp TE
T ss_pred Ce
Confidence 64
No 346
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=96.65 E-value=0.28 Score=42.36 Aligned_cols=218 Identities=14% Similarity=0.090 Sum_probs=109.3
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeCC-CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEee
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSSS-LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF 270 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 270 (454)
.|..++..... .++. . +|.|..|-.. ...+-........|..++..... .++. . ||.|+.|-....-.+..-.
T Consensus 25 ~i~~ia~G~~h-~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYFH-GLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSSE-EEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCCe-EEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCCc
Confidence 57777765442 3333 4 8999999862 21111111223467777765432 3333 5 8999999865432221111
Q ss_pred ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeEE-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccce
Q psy17902 271 GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTH 349 (454)
Q Consensus 271 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 349 (454)
.-...|..|+......++ -. +|.|+.|-.....++ ........+..+..-....+ +-. +|.|..|-......+.
T Consensus 99 ~~~~~v~~ia~G~~hs~a--l~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~-~l~-~G~v~~wG~n~~gqlg 173 (282)
T 3qhy_B 99 EARSGVDAIAAGAWASYA--LK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTAL-AVK-NGGVIAWGDNYFGQTT 173 (282)
T ss_dssp GGSSSEEEEEEETTEEEE--EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEE-EEE-TTEEEEEECCTTSTTS
T ss_pred ccCCCeEEEECcCCEEEE--Ee-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEE-EEE-CCEEEEecCCCCCCCC
Confidence 123467777765433333 34 899999976543322 11122233444433333333 334 7999999765433222
Q ss_pred eeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEecC
Q psy17902 350 TIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT 429 (454)
Q Consensus 350 ~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~ 429 (454)
. +... ...|..++..... .++. .||.|+.|-......+..-. .....|..++.... +.++- .
T Consensus 174 ~-p~~~--------~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~gqlg~p~--~~~~~v~~i~~G~~--h~~al-~- 235 (282)
T 3qhy_B 174 V-PAEA--------QSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRYKQTTVPT--EALSGVSAIASGEW--YSLAL-K- 235 (282)
T ss_dssp C-CGGG--------GSSEEEEEECSSE-EEEE--ETTEEEEEECCTTSTTCCCG--GGGSSCCEEEECSS--CEEEE-E-
T ss_pred C-ceec--------CCCeEEEEecCCE-EEEE--ECCeEEEEECCCCCCCCCCc--ccCCCceEEEcCCC--EEEEE-E-
Confidence 1 1110 1227777764432 3333 58999999765442221111 12234555654432 22222 2
Q ss_pred CCceeeeee
Q psy17902 430 EHRFGRWKT 438 (454)
Q Consensus 430 d~~i~~W~~ 438 (454)
|+.|+.|=.
T Consensus 236 ~g~v~~wG~ 244 (282)
T 3qhy_B 236 NGKVIAWGS 244 (282)
T ss_dssp TTEEEEEST
T ss_pred CCEEEEecC
Confidence 777777743
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.55 E-value=0.53 Score=44.25 Aligned_cols=261 Identities=14% Similarity=0.103 Sum_probs=139.6
Q ss_pred EEEEEeCCCeEEEEEcCCCceecccCCcccCCCC-------------------CC--ceEEEEEe---CCCcEEEEecC-
Q psy17902 156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS-------------------YP--PILALAVA---NNNELVASGDN- 210 (454)
Q Consensus 156 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------------------~~--~v~~~~~~---~~~~~l~~~~~- 210 (454)
.+.+|+..|.|+|+-+.++..+..++........ .+ --..+++. .||+||+.-..
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 3678888999999999888877666543221100 00 01123443 26778877664
Q ss_pred CCcEEEEeC-CCcc--EEeecccCCCeEEEEEc--CCCCEEEEEeC-------CCcEE------------EEeCCCceeE
Q psy17902 211 NSNIKLWSS-SLEH--LHTFTGHKAPITGLAIS--FECDTLYSSSN-------DRSIK------------VWNIEDRAYV 266 (454)
Q Consensus 211 dg~v~vw~~-~~~~--~~~~~~~~~~v~~~~~~--~~~~~l~~~~~-------dg~i~------------iwd~~~~~~~ 266 (454)
+..|...++ ..++ +..+ .....+.+++|- |+..++++++. ||... ..|..+.+..
T Consensus 152 n~RvAri~l~~~~~d~Ii~i-Pn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~ 230 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITV-PNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMA 230 (638)
T ss_dssp TTEEEEEETTTTEEEEEEEC-TTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEE
T ss_pred CcceEEEECCcEeeceeEeC-CCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEE
Confidence 567777777 3332 3322 345678888886 67788888775 33321 1122222221
Q ss_pred EEeeccCCceeEEEeecCCCEEEEeeCCC---------------cEEEeeccC----------------CeEE-------
Q psy17902 267 ETLFGHQSAITSLDILAKNRVISSGGTDK---------------SVRVWKIQE----------------ESQL------- 308 (454)
Q Consensus 267 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg---------------~i~i~d~~~----------------~~~~------- 308 (454)
..+. -.+....+...+++.+.++.+.+. .+.++++.. +-.+
T Consensus 231 ~Qv~-v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~ 309 (638)
T 3sbq_A 231 FQVI-VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKD 309 (638)
T ss_dssp EEEE-ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBT
T ss_pred EEEE-cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccc
Confidence 1111 012223344456777777665432 245555420 1111
Q ss_pred --------EEccccCCeEEEEecCCCEEEEEe-CCCCEEEEecCCCccc---------e--eeecccCCCCCCCCCCcEE
Q psy17902 309 --------VFNGHSRGIDMTRRVNDQQFITCG-EDGTLSLWSILKKVPT---------H--TIPVAHGYDSSSSEPNWIT 368 (454)
Q Consensus 309 --------~~~~~~~~i~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~---------~--~~~~~~~~~~~~~~~~~i~ 368 (454)
......++-.+-..|++.++++++ -+.++.++|+...... . ......+ -...
T Consensus 310 ~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G--------lGPl 381 (638)
T 3sbq_A 310 GKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG--------LGPL 381 (638)
T ss_dssp TBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC--------SCEE
T ss_pred ccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC--------Cccc
Confidence 111112222344456677777665 7889999998742110 0 1111111 1267
Q ss_pred EEEEecCCCEEEEecCCCcEEEEEcCCC----------ceeeEeccCCCceeeeE---EEEcCCCCEEEEE
Q psy17902 369 SVACLHNSDLVASGSYDGCVKLWKITPK----------RTLEFLQDIPLSGVINS---LVFTSDHKHLVAG 426 (454)
Q Consensus 369 ~~~~s~~~~~l~~~~~dg~v~iwd~~~~----------~~~~~~~~~~~~~~v~~---l~~s~d~~~l~~~ 426 (454)
..+|.++|....+---|..|.-|++... ..+..+.-+...+.... =.-.|||++|++.
T Consensus 382 Ht~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 382 HTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred EEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 8999999966666678999999999653 23444443211111111 1236899999887
No 348
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.23 E-value=1.5 Score=38.86 Aligned_cols=102 Identities=14% Similarity=0.146 Sum_probs=62.9
Q ss_pred CceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEE---ee----cccCCCeEEEEEcCC---CCEEEEE-e--CCCcEEE
Q psy17902 191 PPILALAVANNNELVASGDNNSNIKLWSSSLEHLH---TF----TGHKAPITGLAISFE---CDTLYSS-S--NDRSIKV 257 (454)
Q Consensus 191 ~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~---~~----~~~~~~v~~~~~~~~---~~~l~~~-~--~dg~i~i 257 (454)
.....|+|.|+|.++++--..|.|++++....... .+ .........|+|+|+ +..|+.. + .++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 35789999999997777665899999986322222 11 123566889999995 3445443 2 3456766
Q ss_pred EeCCCc----------eeEE-Eee-ccCCceeEEEeecCCCEEEEee
Q psy17902 258 WNIEDR----------AYVE-TLF-GHQSAITSLDILAKNRVISSGG 292 (454)
Q Consensus 258 wd~~~~----------~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~ 292 (454)
|.+..+ +.+. .+. ........|.|.|+|.+.++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 766541 1121 121 1112346799999998777754
No 349
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.83 E-value=2.5 Score=39.23 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=61.1
Q ss_pred ceEEEEEeCCCcEEEEecCCCcEEEEeCC-Ccc--EEeecc------cCCCeEEEEEcCC---CCEEEEEeC--------
Q psy17902 192 PILALAVANNNELVASGDNNSNIKLWSSS-LEH--LHTFTG------HKAPITGLAISFE---CDTLYSSSN-------- 251 (454)
Q Consensus 192 ~v~~~~~~~~~~~l~~~~~dg~v~vw~~~-~~~--~~~~~~------~~~~v~~~~~~~~---~~~l~~~~~-------- 251 (454)
....|+|.|+|+++++-...+.|++++.. +.. +..+.. ....+..|+|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 56799999999977776544578888763 332 222221 2456779999995 555555432
Q ss_pred -----CCcEEEEeCCCc-------eeEEE-ee-ccCCceeEEEeecCCCEEEEeeC
Q psy17902 252 -----DRSIKVWNIEDR-------AYVET-LF-GHQSAITSLDILAKNRVISSGGT 293 (454)
Q Consensus 252 -----dg~i~iwd~~~~-------~~~~~-~~-~~~~~v~~~~~~~~~~~l~~~~~ 293 (454)
...|.-|++... +.+.. +. ........|.|.|+|.+.++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666665321 11211 21 11234688999999987776543
No 350
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=94.51 E-value=2.2 Score=37.23 Aligned_cols=191 Identities=13% Similarity=0.082 Sum_probs=108.4
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeccc--CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCC---------
Q psy17902 152 SDSKHVYSACKDGIIIKWLLETRSKVCSS--PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSS--------- 220 (454)
Q Consensus 152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~--------- 220 (454)
++..++++.+.+|.|+--.+........- ............+..+........++..+..|.++-+...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 45678899999999998877654332210 0000000123345555555556667777778887776641
Q ss_pred -Ccc---EEeecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCc-------eeEEEeeccCCceeEEEeecCCC
Q psy17902 221 -LEH---LHTFTGHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDR-------AYVETLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 221 -~~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 286 (454)
+.. ...+. ....|.++...+ +..+|+.++..|.++...+... .....+.. ...+..+.....+.
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 111 11122 223455544332 4678889999999998887432 22222332 45566665555556
Q ss_pred EEEEeeCCCcEEEeeccCCeE---------E-EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCC
Q psy17902 287 VISSGGTDKSVRVWKIQEESQ---------L-VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK 344 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~---------~-~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~ 344 (454)
.++..+.+|.+..+....-.. . .+......+.+....++..+++.+..|......+..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 677788999988887754111 1 222222223333344566788889999988887743
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.34 E-value=2.9 Score=37.87 Aligned_cols=140 Identities=10% Similarity=-0.038 Sum_probs=68.1
Q ss_pred CCEEEEEeCCCeEEEEEcCC-CceecccCCcccCCCCCCceEEEEEeC--CCcEEEEecCCC----cEEEEeCCCccEEe
Q psy17902 154 SKHVYSACKDGIIIKWLLET-RSKVCSSPFVKTDRKSYPPILALAVAN--NNELVASGDNNS----NIKLWSSSLEHLHT 226 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg----~v~vw~~~~~~~~~ 226 (454)
...|++|+..| +.+++... +........ . .....|.+|++.| .+.+.+.+ ..| .|...+-.+..-..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~---~~~~~v~~i~~dp~~~~~l~~g~-~~g~~g~gl~~s~D~G~tW~~ 95 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGP-V---FLGHTIHHIVQDPREPERMLMAA-RTGHLGPTVFRSDDGGGNWTE 95 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEE-E---STTSEEEEEEECSSSTTCEEEEE-EC--CCEEEEEESSTTSCCEE
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCc-c---CCCCceEEEEECCCCCCeEEEEe-cCCCCCccEEEeCCCCCCceE
Confidence 34777888777 54554432 221111100 0 1234799999998 45544444 344 34443322221111
Q ss_pred ec------c--------cCCCeEEEEEcCC--CCEEEEEeCCCcEEEEeCCCceeEEEeec-------------------
Q psy17902 227 FT------G--------HKAPITGLAISFE--CDTLYSSSNDRSIKVWNIEDRAYVETLFG------------------- 271 (454)
Q Consensus 227 ~~------~--------~~~~v~~~~~~~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~~------------------- 271 (454)
+. . +...|.++++.|. ...|++++..+.|...+-. +.....+..
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCC
Confidence 11 1 1125778899872 4567776666666555422 222222211
Q ss_pred cCCceeEEEeecC-CCEEEEeeCCCcEEEe
Q psy17902 272 HQSAITSLDILAK-NRVISSGGTDKSVRVW 300 (454)
Q Consensus 272 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~ 300 (454)
....|.+|.++|. ...|+.+..++.|...
T Consensus 175 ~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred CCCceeEEEECCCCCCEEEEEECCCCEEEE
Confidence 1235788999874 3445555444444443
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.30 E-value=3.4 Score=38.42 Aligned_cols=108 Identities=12% Similarity=0.002 Sum_probs=59.3
Q ss_pred eEEEEEcCCCC-EEEEEeCCCeEEEEEcCCCc---eecccCCcccC---CCCCCceEEEEEeCC----CcEEEEecC--C
Q psy17902 145 ITCIAVTSDSK-HVYSACKDGIIIKWLLETRS---KVCSSPFVKTD---RKSYPPILALAVANN----NELVASGDN--N 211 (454)
Q Consensus 145 V~~~~~s~~~~-~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~---~~~~~~v~~~~~~~~----~~~l~~~~~--d 211 (454)
...|+|.|++. .|+++...|.|++++..... .+..+...... .........|+|+|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 68999999986 55566788999999754321 11111110000 012457889999996 443333221 1
Q ss_pred ----------CcEEEEeCCC-----------ccEEeec--ccCCCeEEEEEcCCCCEEEEEeCC
Q psy17902 212 ----------SNIKLWSSSL-----------EHLHTFT--GHKAPITGLAISFECDTLYSSSND 252 (454)
Q Consensus 212 ----------g~v~vw~~~~-----------~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d 252 (454)
..|.-|.+.. +.+..+. ........|.|.|||.++++.+..
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1333354421 1122221 122346789999999877776543
No 353
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.01 E-value=3.4 Score=37.40 Aligned_cols=157 Identities=6% Similarity=-0.005 Sum_probs=76.3
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCC----eEEEEEcCCCceecccCCcccCC-C-------CCCceEEEEEeCC--CcEEE
Q psy17902 142 RASITCIAVTS-DSKHVYSACKDG----IIIKWLLETRSKVCSSPFVKTDR-K-------SYPPILALAVANN--NELVA 206 (454)
Q Consensus 142 ~~~V~~~~~s~-~~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~~~~~-~-------~~~~v~~~~~~~~--~~~l~ 206 (454)
...|.+|++.| +...|++++..| .|... .+.+..-..+....... . ....|.++++.|. ...|.
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35699999998 334455555444 34332 22232222111100000 0 1235788999862 34455
Q ss_pred EecCCCcEEEEeCCCccEEeecc-------------------cCCCeEEEEEcCC-CCEEEEEeCCCcEEEEeCCCceeE
Q psy17902 207 SGDNNSNIKLWSSSLEHLHTFTG-------------------HKAPITGLAISFE-CDTLYSSSNDRSIKVWNIEDRAYV 266 (454)
Q Consensus 207 ~~~~dg~v~vw~~~~~~~~~~~~-------------------~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~ 266 (454)
++...+.|...+-.+..-..+.. ....+.+|.+.|. ...|+.+..++.|...+- .++..
T Consensus 133 ~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW 211 (394)
T 3b7f_A 133 AGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDW 211 (394)
T ss_dssp EEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSC
T ss_pred EEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCc
Confidence 55555655555433322222210 1235788999873 455666655554554432 23222
Q ss_pred EEeec-----c--------CCceeEEEeecC-CCEEEEeeCCCcEEEee
Q psy17902 267 ETLFG-----H--------QSAITSLDILAK-NRVISSGGTDKSVRVWK 301 (454)
Q Consensus 267 ~~~~~-----~--------~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d 301 (454)
..+.. + ...+.+|.++|. ...|+.+...+ |...+
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 22211 0 124888999886 35666665444 44443
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.93 E-value=4 Score=37.92 Aligned_cols=103 Identities=8% Similarity=0.009 Sum_probs=60.0
Q ss_pred ceEEEEEeCCCc-EEEEecCCCcEEEEeCCCc----cEEeec---------ccCCCeEEEEEcCC----CCEEEEEeC--
Q psy17902 192 PILALAVANNNE-LVASGDNNSNIKLWSSSLE----HLHTFT---------GHKAPITGLAISFE----CDTLYSSSN-- 251 (454)
Q Consensus 192 ~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~----~~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~-- 251 (454)
....|+|.|++. .|+++...|.|++++..+. .+..+. ........|+|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 467899999986 4555567899999976432 222221 11456789999996 333333222
Q ss_pred C----------CcEEEEeCCC----------ceeEEEee--ccCCceeEEEeecCCCEEEEeeCC
Q psy17902 252 D----------RSIKVWNIED----------RAYVETLF--GHQSAITSLDILAKNRVISSGGTD 294 (454)
Q Consensus 252 d----------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d 294 (454)
+ ..|.-|.+.. .+.+..+. ........|.|.|+|.+.++.+..
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1 1344455532 12333332 112335789999999877776543
No 355
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.89 E-value=4.4 Score=38.24 Aligned_cols=73 Identities=5% Similarity=0.030 Sum_probs=50.4
Q ss_pred EEEEEEecCCCEEEEec-CCCcEEEEEcCCC------cee----eEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902 367 ITSVACLHNSDLVASGS-YDGCVKLWKITPK------RTL----EFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 367 i~~~~~s~~~~~l~~~~-~dg~v~iwd~~~~------~~~----~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~ 435 (454)
...+.++|+|+++++++ .+.+|.++++..- +.+ .........-.....+|.++| ..+++.--|..|..
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceEEE
Confidence 55688999999776654 5889999998742 110 001111234456778999999 66666678999999
Q ss_pred eeeeC
Q psy17902 436 WKTIK 440 (454)
Q Consensus 436 W~~~~ 440 (454)
|+...
T Consensus 404 Wni~~ 408 (638)
T 3sbq_A 404 WNMEE 408 (638)
T ss_dssp EEHHH
T ss_pred EeccH
Confidence 99754
No 356
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=92.55 E-value=4.9 Score=34.96 Aligned_cols=241 Identities=9% Similarity=0.028 Sum_probs=119.5
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeccc--CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C-----
Q psy17902 152 SDSKHVYSACKDGIIIKWLLETRSKVCSS--PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S----- 220 (454)
Q Consensus 152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~----- 220 (454)
|+..++++.+.+|.|+--.+........- ............+..+........|+..+..|.++-+.. .
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 35567889999999988777654322210 000000012234444444445556666677787666553 1
Q ss_pred -CccEE---eecccCCCeEEEEEc---CCCCEEEEEeCCCcEEEEeCCCc-------eeEEEeeccCCceeEEEeecCCC
Q psy17902 221 -LEHLH---TFTGHKAPITGLAIS---FECDTLYSSSNDRSIKVWNIEDR-------AYVETLFGHQSAITSLDILAKNR 286 (454)
Q Consensus 221 -~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~ 286 (454)
+.++. .+. ....|.++... .++.+++.++..|.++...+... .....+..+ ..+..+.......
T Consensus 81 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~ 158 (307)
T 1zi0_A 81 RGRPIVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGED 158 (307)
T ss_dssp CCEEGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTC
T ss_pred CCeEhhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCC
Confidence 11111 122 23456555432 34568999999999999876422 111223333 4555555554555
Q ss_pred EEEEeeCCCcEEEeeccCCeEE----------EEccccCCeEEEE-ecCCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902 287 VISSGGTDKSVRVWKIQEESQL----------VFNGHSRGIDMTR-RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH 355 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~i~~~~-~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 355 (454)
.|+..+..|.+..+....-... .+.. ...+..+. ..++..+++.+..|.++..++........-....
T Consensus 159 ~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~ 237 (307)
T 1zi0_A 159 EVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGV 237 (307)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGGGSCCCCTTSCCE
T ss_pred EEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHHHhccCCCCCCCE
Confidence 6667788888888776431111 1211 22233333 3345678888999988887763321110000000
Q ss_pred CCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 356 ~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
........+..+..+....+..-|+..+.+|.+.-+.+..
T Consensus 238 ~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 238 ISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp ESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred EeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 0000001123354444433444555666677777666653
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=91.80 E-value=6.3 Score=34.59 Aligned_cols=229 Identities=8% Similarity=0.015 Sum_probs=123.4
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcee-------cccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C--
Q psy17902 154 SKHVYSACKDGIIIKWLLETRSKV-------CSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S-- 220 (454)
Q Consensus 154 ~~~l~~~~~dg~i~iwd~~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~-- 220 (454)
...+++.+.+|.|+--.+.+.... ....+ .....+..+........|+.-+..|.++-... .
T Consensus 3 E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~-----ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~ 77 (327)
T 3uc1_A 3 EDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGL-----KQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEAS 77 (327)
T ss_dssp CEEEEEEETTSEEEEEEHHHHHHHC--------CCC-----CGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCC
T ss_pred ccEEEEEeCCCEEEEeeHHHhhhcccCCCCcccccc-----CCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCC
Confidence 357788888999987664432211 11111 12334555555555556666666787665543 1
Q ss_pred ----CccEEeec--ccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCce-------eEEEeeccCCceeEEEeecC
Q psy17902 221 ----LEHLHTFT--GHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDRA-------YVETLFGHQSAITSLDILAK 284 (454)
Q Consensus 221 ----~~~~~~~~--~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~ 284 (454)
+.++..+- .....|.++...+ +..+++.++.+|.|+...+.... ....+.. ...+..+.....
T Consensus 78 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~ 156 (327)
T 3uc1_A 78 RTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSA 156 (327)
T ss_dssp SSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECT
T ss_pred ccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecC
Confidence 11111111 1234555554433 47799999999999998765422 1122333 344555555555
Q ss_pred CCEEEEeeCCCcEEEeecc--CCeEE----------EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccc----
Q psy17902 285 NRVISSGGTDKSVRVWKIQ--EESQL----------VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPT---- 348 (454)
Q Consensus 285 ~~~l~~~~~dg~i~i~d~~--~~~~~----------~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~---- 348 (454)
...|+..+..|.+..+... .-... .+......+.+....++..++..+..|.++.-.+......
T Consensus 157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~ 236 (327)
T 3uc1_A 157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGG 236 (327)
T ss_dssp TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCC
Confidence 5667777888988877766 21111 1222222233344445668999999999988776432221
Q ss_pred ---eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 349 ---HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 349 ---~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
..+... .....+..+....+...|+..+.+|.+.-++...
T Consensus 237 ~G~~~~~l~-------~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 237 KGVLTVMYD-------RRRGRLVGALIVDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CCEESSCCC-------TTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGGG
T ss_pred CcEEEEEec-------CCCCeEEEEEEeCCCccEEEEcCCCeEEEEehhh
Confidence 111110 0012244444444445666677778888887653
No 358
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=90.18 E-value=9 Score=33.54 Aligned_cols=187 Identities=10% Similarity=0.062 Sum_probs=103.5
Q ss_pred CCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C------C
Q psy17902 152 SDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S------L 221 (454)
Q Consensus 152 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~------~ 221 (454)
|+..++++.+.+|.|+--.+........... .......+..+........|+..+..|.++-+.. . +
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~---~lke~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDF---AMKDTDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCC---CCCTTCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCcccc---ccCCCCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 5667889999999998876553221111000 0123345555555555666777777888766653 1 1
Q ss_pred ccEE---eecccCCCeEEEEEcCC---CCEEEEEeCCCcEEEEeCCCc--------eeEEEeeccCCceeEEEeecCCCE
Q psy17902 222 EHLH---TFTGHKAPITGLAISFE---CDTLYSSSNDRSIKVWNIEDR--------AYVETLFGHQSAITSLDILAKNRV 287 (454)
Q Consensus 222 ~~~~---~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~ 287 (454)
.++. .+. ....|.++...++ +.+|+.++.+|.++...+... .....+.. ...+..+........
T Consensus 80 ~~i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~ 157 (323)
T 1wp5_A 80 QHIANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNE 157 (323)
T ss_dssp EEGGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSE
T ss_pred cChhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCE
Confidence 1111 111 2234555433332 568999999999999877422 11112222 245555555545566
Q ss_pred EEEeeCCCcEEEeeccCCeEE----------EEccccCCeEEEEecCCC-EEEEEeCCCCEEEEecC
Q psy17902 288 ISSGGTDKSVRVWKIQEESQL----------VFNGHSRGIDMTRRVNDQ-QFITCGEDGTLSLWSIL 343 (454)
Q Consensus 288 l~~~~~dg~i~i~d~~~~~~~----------~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~iwd~~ 343 (454)
|+..+.+|.+..+....-... .+......+.+....++. .+++.+..|..+..++.
T Consensus 158 i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 158 LFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred EEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 777888998888876431111 121111223333334444 78888888888777664
No 359
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=89.98 E-value=10 Score=33.89 Aligned_cols=151 Identities=7% Similarity=0.011 Sum_probs=85.4
Q ss_pred cCCCCEEEEEeCCCeEEEEEcCCCceeccc--CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C----
Q psy17902 151 TSDSKHVYSACKDGIIIKWLLETRSKVCSS--PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S---- 220 (454)
Q Consensus 151 s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~---- 220 (454)
-|+..++++.+.+|.|+--.+........- ............+..+........|+..+..|.++-+.. .
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 467789999999999998765432211100 000000023445666666666666777777787766653 1
Q ss_pred --CccEE---eecccCCCeEEEEEcC---CCCEEEEEeCCCcEEEEeCCCce-------eEEEeeccCCceeEEEeecCC
Q psy17902 221 --LEHLH---TFTGHKAPITGLAISF---ECDTLYSSSNDRSIKVWNIEDRA-------YVETLFGHQSAITSLDILAKN 285 (454)
Q Consensus 221 --~~~~~---~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~ 285 (454)
+..+. .+. ....|.++.... ++.+|+.++..|.++...+.... ....+.. ...+..+......
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD 161 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC
Confidence 11111 122 234555554432 45689999999999988764322 1222322 3445455554445
Q ss_pred CEEEEeeCCCcEEEeecc
Q psy17902 286 RVISSGGTDKSVRVWKIQ 303 (454)
Q Consensus 286 ~~l~~~~~dg~i~i~d~~ 303 (454)
..|+..+..|.+..+...
T Consensus 162 ~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CEEEEEETTSEEEEEEGG
T ss_pred ceEEEEeCCCeEEEEEcc
Confidence 566677788888777654
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=89.62 E-value=9.8 Score=33.12 Aligned_cols=193 Identities=13% Similarity=0.104 Sum_probs=106.6
Q ss_pred CCCcEEEEecCCCcEEEEeCC-Cc-------cEEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC---Cc----
Q psy17902 200 NNNELVASGDNNSNIKLWSSS-LE-------HLHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIE---DR---- 263 (454)
Q Consensus 200 ~~~~~l~~~~~dg~v~vw~~~-~~-------~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~---~~---- 263 (454)
++..++++.+.+|.|+--.+. .. -+..+. .-.+.+..+........++..+..|.++-+... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 456678888999999887651 11 111111 122345555555556678888899987766543 11
Q ss_pred --ee---EEEeeccCCceeEEEeec---CCCEEEEeeCCCcEEEeeccCCeE-------E-EEccccCCeEEEEecCCCE
Q psy17902 264 --AY---VETLFGHQSAITSLDILA---KNRVISSGGTDKSVRVWKIQEESQ-------L-VFNGHSRGIDMTRRVNDQQ 327 (454)
Q Consensus 264 --~~---~~~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~-------~-~~~~~~~~i~~~~~~~~~~ 327 (454)
.. ...+. ....|.++...+ +..+|+..+..|.++...+..-.. . .+......+......++..
T Consensus 86 ~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~~ 164 (312)
T 1suu_A 86 KGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDEK 164 (312)
T ss_dssp --CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTCE
T ss_pred CCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCCE
Confidence 11 01121 223455544333 456777889999998887743211 1 2222222233333445678
Q ss_pred EEEEeCCCCEEEEecCCCccceee-ecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCC
Q psy17902 328 FITCGEDGTLSLWSILKKVPTHTI-PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITP 395 (454)
Q Consensus 328 l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~ 395 (454)
++..+.+|.+..+....-...... ........ .....|..+...+++..|++.+..|..+...+..
T Consensus 165 i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L--~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 165 VICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKL--KEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTBCCEECCCC--CTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEeCCCcEEEEEHHHccccCCCCCCeEeEEe--CCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 889999999988877432111110 00000000 1123366666655666788888999999998853
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=89.47 E-value=5.8 Score=40.75 Aligned_cols=39 Identities=23% Similarity=0.300 Sum_probs=33.5
Q ss_pred CCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902 364 PNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 364 ~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 402 (454)
...+.+++..++..++++-+.|+++|+|++.++.++...
T Consensus 235 ~~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 235 PNTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp TTCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 344788888888899999999999999999999877664
No 362
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=88.33 E-value=11 Score=32.09 Aligned_cols=119 Identities=12% Similarity=0.042 Sum_probs=73.4
Q ss_pred CCCCeEEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902 141 HRASITCIAVTS-DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS 219 (454)
Q Consensus 141 h~~~V~~~~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~ 219 (454)
....|.++.... +..+++..+.+|.++...+.... ...-............+..+........|+..+..|.+..+..
T Consensus 66 ~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~ 144 (276)
T 3no0_A 66 REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSV 144 (276)
T ss_dssp TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEG
T ss_pred CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEh
Confidence 355666665421 46799999999999999877653 1111100000123345666666556667888888899888875
Q ss_pred C-----C-----ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC
Q psy17902 220 S-----L-----EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE 261 (454)
Q Consensus 220 ~-----~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 261 (454)
. + .....+. ....|.++...+++..++..+..|.++...+.
T Consensus 145 ~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 145 REVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp GGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred hhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 1 1 1111222 23556666555566788999999999888764
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=87.86 E-value=12 Score=31.89 Aligned_cols=197 Identities=11% Similarity=0.065 Sum_probs=106.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEe---CCCceeEEEeeccCCceeEEEeec--CCCEEEEeeCCCcEEEeeccCC
Q psy17902 231 KAPITGLAISFECDTLYSSSNDRSIKVWN---IEDRAYVETLFGHQSAITSLDILA--KNRVISSGGTDKSVRVWKIQEE 305 (454)
Q Consensus 231 ~~~v~~~~~~~~~~~l~~~~~dg~i~iwd---~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~ 305 (454)
.+.+..+.......+|+.-+..|.++--. +........+ .....|..+.. + +..+++..+.+|.++...+..-
T Consensus 23 gD~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll-~~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~ 100 (276)
T 3no0_A 23 KAPVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLK-SREEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEF 100 (276)
T ss_dssp CCCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCS-STTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGT
T ss_pred CCeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccC-CCCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHh
Confidence 34555555555566777777888776543 3222111113 23455666644 4 4678888999999999887653
Q ss_pred e-----EE--EEccccCCeEEEEecCCCEEEEEeCCCCEEEEecCCCccceee-ecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902 306 S-----QL--VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI-PVAHGYDSSSSEPNWITSVACLHNSD 377 (454)
Q Consensus 306 ~-----~~--~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~ 377 (454)
. .. .+......+..........++..+..|.+..+....-.....- ........ .....|..+...+++.
T Consensus 101 ~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L--~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 101 EYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKL--EKNDETSGLRIWNGEP 178 (276)
T ss_dssp TTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCC--CTTCCEEEEEEESSCS
T ss_pred hhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEcc--CCCCEEEEEEEeCCCC
Confidence 2 11 2222223333444445668888999999888865321111000 00000000 1123466666666677
Q ss_pred EEEEecCCCcEEEEEcCCC-------ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceee
Q psy17902 378 LVASGSYDGCVKLWKITPK-------RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 378 ~l~~~~~dg~v~iwd~~~~-------~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~ 435 (454)
.|+..+..|.++...+..- +-+..+ ...+.+..+....+...++.. +.+|.+..
T Consensus 179 ~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i---~~~~~lv~~~~~~~~~~i~~~-t~~G~~ir 239 (276)
T 3no0_A 179 YLLVITAKGRVKKISHEEIPKTNRGVKGTEVS---GTKDTLVDLIPIKEEVELLIT-TKNGKAFY 239 (276)
T ss_dssp EEEEEETTSCEEEEEGGGSCCCCTTCCCEECC---CSSSCEEEEEEESSEEEEEEE-ETTSCEEE
T ss_pred EEEEEeCCCcEEEeEHHHcccCCCCCcceEEE---cCCCcEEEEEEeCCCCEEEEE-cCCCeEEE
Confidence 8888899999999887532 122222 123444444333333344444 46676666
No 364
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=87.57 E-value=14 Score=32.34 Aligned_cols=193 Identities=11% Similarity=0.077 Sum_probs=106.4
Q ss_pred CCCcEEEEecCCCcEEEEeCC-----CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC---CC------cee
Q psy17902 200 NNNELVASGDNNSNIKLWSSS-----LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI---ED------RAY 265 (454)
Q Consensus 200 ~~~~~l~~~~~dg~v~vw~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~---~~------~~~ 265 (454)
|+..++++.+.+|.|+--.+. +..-..++. .+.+..+........|+..+..|.++-+.. .. |.+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke-~D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKD-TDRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCT-TCCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 456678888899999876541 111122332 234545555556677888888898766554 21 222
Q ss_pred EEEe-e-ccCCceeEEEeecC---CCEEEEeeCCCcEEEeeccCC-------eEE--EEccccCCeEEEEecCCCEEEEE
Q psy17902 266 VETL-F-GHQSAITSLDILAK---NRVISSGGTDKSVRVWKIQEE-------SQL--VFNGHSRGIDMTRRVNDQQFITC 331 (454)
Q Consensus 266 ~~~~-~-~~~~~v~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~-------~~~--~~~~~~~~i~~~~~~~~~~l~~~ 331 (454)
+..+ . .....|.++...++ +.+++.++..|.++...+... ... .+......+........+.++..
T Consensus 82 i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l~ 161 (323)
T 1wp5_A 82 IANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFLV 161 (323)
T ss_dssp GGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEEE
T ss_pred hhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEEE
Confidence 1111 1 12334555443332 567888899999998877421 111 22222222333334456778889
Q ss_pred eCCCCEEEEecCCCccceeee-cccCCCCCCCCCCcEEEEEEecCCC-EEEEecCCCcEEEEEcCC
Q psy17902 332 GEDGTLSLWSILKKVPTHTIP-VAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDGCVKLWKITP 395 (454)
Q Consensus 332 ~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~v~iwd~~~ 395 (454)
+.+|.+..+....-.+..... ...... ......|.++...+++. .|++.+..|..+..++..
T Consensus 162 T~~G~~irf~~~ev~~~gR~a~GV~~i~--L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 162 THNGYALWFDESEVSIVGVRAAGVKGMN--LKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp ETTSEEEEEEGGGSCBCCSSCCCEECCC--CCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred eCCCcEEEEEHHHCcccCCCCcCEEEEE--eCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 999998888764322111100 000000 01223366665555555 788888889888887754
No 365
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=86.45 E-value=16 Score=31.97 Aligned_cols=194 Identities=9% Similarity=0.051 Sum_probs=111.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEc---CCC------ceec-ccCCcccCCCCCCceEEEEEeC---CCcEEEEec
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGIIIKWLL---ETR------SKVC-SSPFVKTDRKSYPPILALAVAN---NNELVASGD 209 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~i~iwd~---~~~------~~~~-~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~ 209 (454)
+.+..+........|+.-+..|.++.... ... ..+. .+.+ .....|.++..-+ +..++++.+
T Consensus 42 D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l-----~~~e~i~~~~~~~~~~~e~~~v~~T 116 (327)
T 3uc1_A 42 DIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAF-----QPEERIAQVIQIRGYTDAPYLVLAT 116 (327)
T ss_dssp GCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTC-----CTTCCEEEEEEESSTTSSSEEEEEE
T ss_pred CEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCC-----CCCCEEEEEEEeccCCCCCEEEEEc
Confidence 44555555555566777777887765543 221 1100 0111 2334566554433 477999999
Q ss_pred CCCcEEEEeCCC--------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCC--Cc---------eeEEEee
Q psy17902 210 NNSNIKLWSSSL--------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIE--DR---------AYVETLF 270 (454)
Q Consensus 210 ~dg~v~vw~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~--~~---------~~~~~~~ 270 (454)
.+|.++-..+.. .....+.. .+.+..+........|+..+..|.+..+.+. .- .....+.
T Consensus 117 ~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~ 195 (327)
T 3uc1_A 117 RNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN 195 (327)
T ss_dssp TTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC
T ss_pred CCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC
Confidence 999999887611 11122333 3455555555566788888999998888776 21 1111222
Q ss_pred ccCCceeEEEeecCCCEEEEeeCCCcEEEeeccCCeE-------E---EEccccCCe-EEEEecCCCEEEEEeCCCCEEE
Q psy17902 271 GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQ-------L---VFNGHSRGI-DMTRRVNDQQFITCGEDGTLSL 339 (454)
Q Consensus 271 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------~---~~~~~~~~i-~~~~~~~~~~l~~~~~dg~i~i 339 (454)
....|.++...+.+..|+..+..|.++.-.+..-.. + .+......+ .+.....+..++..+.+|.+..
T Consensus 196 -~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir 274 (327)
T 3uc1_A 196 -IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIR 274 (327)
T ss_dssp -TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEE
T ss_pred -CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEE
Confidence 344566666666667888889999988877643211 1 121212223 3333345567778888888887
Q ss_pred EecC
Q psy17902 340 WSIL 343 (454)
Q Consensus 340 wd~~ 343 (454)
+...
T Consensus 275 ~~~~ 278 (327)
T 3uc1_A 275 TAAR 278 (327)
T ss_dssp EEGG
T ss_pred Eehh
Confidence 7764
No 366
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=86.09 E-value=28 Score=34.36 Aligned_cols=236 Identities=9% Similarity=0.058 Sum_probs=119.6
Q ss_pred eEEEE-EcCCCCEEEEEeCC-----CeEEEEEcCCCceecccCCcccCCCCC-----CceEEEEEeCCCcEEEEec----
Q psy17902 145 ITCIA-VTSDSKHVYSACKD-----GIIIKWLLETRSKVCSSPFVKTDRKSY-----PPILALAVANNNELVASGD---- 209 (454)
Q Consensus 145 V~~~~-~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~---- 209 (454)
...+. ++|++++++.+-+. ..++++|+.+++.+..--. . .... .....++|..+..++++..
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~--~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-P--ITNSGKLLEGKFTYPTWINKDTIIFNLVLHKN 207 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-C--BCTTCCBCCEETCCEEEEETTEEEECCCCSTT
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-c--ccccccccccccceeeEECCCEEEEEeCCCCC
Confidence 34455 88999988765332 3899999999876642110 0 0111 0113346764444444321
Q ss_pred ------CCCcEEEEeCCC---ccEEeecccCCCe-EEEEEcCCCCE-----EEEEeC---CCcEEEEeCCC--ceeEEEe
Q psy17902 210 ------NNSNIKLWSSSL---EHLHTFTGHKAPI-TGLAISFECDT-----LYSSSN---DRSIKVWNIED--RAYVETL 269 (454)
Q Consensus 210 ------~dg~v~vw~~~~---~~~~~~~~~~~~v-~~~~~~~~~~~-----l~~~~~---dg~i~iwd~~~--~~~~~~~ 269 (454)
....|+.|.+.+ .-...+......+ .+...++++.+ +++.+. ...+.+.+... +... .+
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l 286 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQ-KI 286 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEE-EC
T ss_pred CcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcce-Ee
Confidence 124688888722 2233343333333 33445666652 444332 24566666653 3322 22
Q ss_pred eccCCceeEEEeecCCCEEEEe----------eCCCcEEEeeccCCe--------EEE-E-ccccCCeEEEEecCCCEEE
Q psy17902 270 FGHQSAITSLDILAKNRVISSG----------GTDKSVRVWKIQEES--------QLV-F-NGHSRGIDMTRRVNDQQFI 329 (454)
Q Consensus 270 ~~~~~~v~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~--------~~~-~-~~~~~~i~~~~~~~~~~l~ 329 (454)
..... ..+..+..+.+++.. ...+.|.+.++.++. ... + ......+..+.+..+..++
T Consensus 287 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 364 (711)
T 4hvt_A 287 NMPSD--ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDRVFL 364 (711)
T ss_dssp CSCTT--CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSCEEE
T ss_pred ecCCc--ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCEEEE
Confidence 21111 122334455555532 246678888887631 112 2 2223345556666677777
Q ss_pred EEeCCCC--EEEEecCCCc-ccee-eecccCCCCCCCCCCcEEEEEEecCCC-EEEEecC---CCcEEEEEcC
Q psy17902 330 TCGEDGT--LSLWSILKKV-PTHT-IPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSY---DGCVKLWKIT 394 (454)
Q Consensus 330 ~~~~dg~--i~iwd~~~~~-~~~~-~~~~~~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~---dg~v~iwd~~ 394 (454)
+...++. |.++++.++. .... +.... ...+..+.+++++. ++++.+. -+.+..+|+.
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~--------~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLPY--------QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCCS--------TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCCC--------CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 7777764 6667765553 2222 22211 12266666667665 4444332 3567777765
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=84.38 E-value=3.5 Score=39.50 Aligned_cols=60 Identities=17% Similarity=0.201 Sum_probs=44.3
Q ss_pred EEEEEEecCCCEEEEecCC------------CcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEe
Q psy17902 367 ITSVACLHNSDLVASGSYD------------GCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGI 427 (454)
Q Consensus 367 i~~~~~s~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~ 427 (454)
.-.|+|+|.|+++++-..+ ..+.+.+..+++..+.+.. +....++.++|+||++.|++..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEEEE
Confidence 6779999999977765432 2355556666666655554 4678899999999999998874
No 368
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=83.31 E-value=37 Score=33.48 Aligned_cols=222 Identities=10% Similarity=0.055 Sum_probs=109.1
Q ss_pred EEEE-EeCCCcEEEEecC-----CCcEEEEeCCCc-cEE-eec-ccCC------CeEEEEEcCCCCEEEEEe--------
Q psy17902 194 LALA-VANNNELVASGDN-----NSNIKLWSSSLE-HLH-TFT-GHKA------PITGLAISFECDTLYSSS-------- 250 (454)
Q Consensus 194 ~~~~-~~~~~~~l~~~~~-----dg~v~vw~~~~~-~~~-~~~-~~~~------~v~~~~~~~~~~~l~~~~-------- 250 (454)
..+. ++|++++++.+-+ -..++++|+..+ .+. .+. .-.. ....++|..+. .++.+.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCSTTCBC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCCCCCcC
Confidence 3444 7888887766422 247899999443 331 111 0000 11345787444 444432
Q ss_pred ---CCCcEEEEeCCCce--eEEEeeccCCce-eEEEeecCCC-----EEEEeeCC---CcEEEeeccC--CeEEEEcccc
Q psy17902 251 ---NDRSIKVWNIEDRA--YVETLFGHQSAI-TSLDILAKNR-----VISSGGTD---KSVRVWKIQE--ESQLVFNGHS 314 (454)
Q Consensus 251 ---~dg~i~iwd~~~~~--~~~~~~~~~~~v-~~~~~~~~~~-----~l~~~~~d---g~i~i~d~~~--~~~~~~~~~~ 314 (454)
....|+.|.+.+.. -...+.+....+ .+...++++. .+++.+.+ ..+++.++.. +....+....
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 290 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPS 290 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCT
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCC
Confidence 12468888876642 223343333332 2344455655 24443322 3456666543 3323222211
Q ss_pred CCeEEEEecCCCEEEEE----------eCCCCEEEEecCCCcc-------ceeeecccCCCCCCCCCCcEEEEEEecCCC
Q psy17902 315 RGIDMTRRVNDQQFITC----------GEDGTLSLWSILKKVP-------THTIPVAHGYDSSSSEPNWITSVACLHNSD 377 (454)
Q Consensus 315 ~~i~~~~~~~~~~l~~~----------~~dg~i~iwd~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~ 377 (454)
....+....+.+++.. ...+.|.+.++.+... ...+- .+. ....+..+.+..+ .
T Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~l~~~~~~~~-~ 361 (711)
T 4hvt_A 291 -DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILF-TPT------ANEVFNFISTTKD-R 361 (711)
T ss_dssp -TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEE-CCC------TTEEEEEEEECSS-C
T ss_pred -cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEE-CCC------CCCeEEEEEEECC-E
Confidence 2222333344333322 2467888888866421 11211 111 1234778888865 5
Q ss_pred EEEEecCCCc--EEEEEcCCCc-eeeE-eccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 378 LVASGSYDGC--VKLWKITPKR-TLEF-LQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 378 ~l~~~~~dg~--v~iwd~~~~~-~~~~-~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
++++...++. |.++++.++. .... +.. +..+.+..+.+++++..++..
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~l-p~~~~~~~~~~~~~~~~~~~~ 413 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKL-PYQNAIFGMSSYEEEEEALIT 413 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECC-CSTTCEEEEECCTTCSCEEEE
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCC-CCCeEEEEEeecCcCCEEEEE
Confidence 7777777764 6677776664 2333 322 223456667777777655443
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=81.06 E-value=30 Score=30.88 Aligned_cols=144 Identities=10% Similarity=0.055 Sum_probs=85.2
Q ss_pred eCCCcEEEEecCCCcEEEEeCC----------CccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC---CC---
Q psy17902 199 ANNNELVASGDNNSNIKLWSSS----------LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI---ED--- 262 (454)
Q Consensus 199 ~~~~~~l~~~~~dg~v~vw~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~---~~--- 262 (454)
-|+..++++.+.+|.|+--.+. +..-..++ ....+..+........|+..+..|.++-+.. ..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCc
Confidence 3567788999999999876541 11222333 3456666666666677888888898776543 21
Q ss_pred ---ceeEEEe-e-ccCCceeEEEeec---CCCEEEEeeCCCcEEEeeccCCe------EE--EEccccCCeEEEEecCCC
Q psy17902 263 ---RAYVETL-F-GHQSAITSLDILA---KNRVISSGGTDKSVRVWKIQEES------QL--VFNGHSRGIDMTRRVNDQ 326 (454)
Q Consensus 263 ---~~~~~~~-~-~~~~~v~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~------~~--~~~~~~~~i~~~~~~~~~ 326 (454)
|..+..+ . .....|.++.... .+.+|+.++..|.++...+.... .. .+......+.........
T Consensus 83 ~a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 83 NARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR 162 (370)
T ss_dssp TSCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred ccCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence 2222111 0 1234555554432 35688889999999988764321 11 222222233444444566
Q ss_pred EEEEEeCCCCEEEEecC
Q psy17902 327 QFITCGEDGTLSLWSIL 343 (454)
Q Consensus 327 ~l~~~~~dg~i~iwd~~ 343 (454)
.++..+..|.+..+...
T Consensus 163 ~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGES 179 (370)
T ss_dssp EEEEEETTSEEEEEEGG
T ss_pred eEEEEeCCCeEEEEEcc
Confidence 78888899988888763
No 370
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=80.88 E-value=7.7 Score=36.78 Aligned_cols=62 Identities=15% Similarity=0.158 Sum_probs=43.9
Q ss_pred cEEEEEEecCCCEEEEecC------------CCcEEEEEcCCCceeeEeccCCCceeeeEEEEcCCCCEEEEEec
Q psy17902 366 WITSVACLHNSDLVASGSY------------DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG 428 (454)
Q Consensus 366 ~i~~~~~s~~~~~l~~~~~------------dg~v~iwd~~~~~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~ 428 (454)
....|.|+++|.+.++... ...|..++..+++....+.. +....++.++|+||++.|+++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-CCCccccCCEECCCCCEEEEEEe
Confidence 3788999999997773322 12566666666766555543 34567999999999999998853
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=79.58 E-value=34 Score=30.62 Aligned_cols=162 Identities=17% Similarity=0.188 Sum_probs=96.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC---------------CCeEEEEEcCCC--ceecccCCcccCCCCCCceEEEEEe---C
Q psy17902 141 HRASITCIAVTSDSKHVYSACK---------------DGIIIKWLLETR--SKVCSSPFVKTDRKSYPPILALAVA---N 200 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~~---------------dg~i~iwd~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~---~ 200 (454)
+--.|..+...+.+++-+.=+. --.|.+||+.+. +.+..+.+..........+..+.+. +
T Consensus 85 ~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~ 164 (381)
T 3q6k_A 85 ELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANP 164 (381)
T ss_dssp SSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCT
T ss_pred ceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccC
Confidence 3345888888887654443111 126889999999 8888777654333344578888887 2
Q ss_pred C----CcEEEEec-CCCcEEEEeCCCccEEeec---------------cc----CCCeEEEEEcCC----CCEEEEEeCC
Q psy17902 201 N----NELVASGD-NNSNIKLWSSSLEHLHTFT---------------GH----KAPITGLAISFE----CDTLYSSSND 252 (454)
Q Consensus 201 ~----~~~l~~~~-~dg~v~vw~~~~~~~~~~~---------------~~----~~~v~~~~~~~~----~~~l~~~~~d 252 (454)
. +.++..+. ..+.|.|+|+.......+. +. ...|..|+++|+ ++.|+-....
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 2 34544444 3578999998433322221 10 246788999987 6677766554
Q ss_pred CcEEEEeCC-----Cc---eeEEEeeccC---CceeEEEee-cCCCEEEEeeCCCcEEEeeccC
Q psy17902 253 RSIKVWNIE-----DR---AYVETLFGHQ---SAITSLDIL-AKNRVISSGGTDKSVRVWKIQE 304 (454)
Q Consensus 253 g~i~iwd~~-----~~---~~~~~~~~~~---~~v~~~~~~-~~~~~l~~~~~dg~i~i~d~~~ 304 (454)
+ -++|.+. .. ..+..+ +.. ..-..+++. .+|.++++--....|..|+..+
T Consensus 245 s-~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 245 A-IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp C-SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred C-CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 4 2333332 11 112222 222 233455665 5677777777888999999876
No 372
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=77.66 E-value=34 Score=29.56 Aligned_cols=190 Identities=11% Similarity=0.094 Sum_probs=103.6
Q ss_pred CCcEEEEecCCCcEEEEeCCC-cc-------E--EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC---CC-----
Q psy17902 201 NNELVASGDNNSNIKLWSSSL-EH-------L--HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI---ED----- 262 (454)
Q Consensus 201 ~~~~l~~~~~dg~v~vw~~~~-~~-------~--~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~---~~----- 262 (454)
+..++++.+.+|.|+--.+.. .. + ..++. .+.+..+........|+..+..|.++-+.. ..
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke-~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a 80 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKE-EDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGA 80 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCC-CCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCC
Confidence 456788888899987766521 11 1 11222 234444444455667888888888666543 22
Q ss_pred -ceeEE---EeeccCCceeEEEee---cCCCEEEEeeCCCcEEEeeccCCe------EE--EEccccCCeEEEEecCCCE
Q psy17902 263 -RAYVE---TLFGHQSAITSLDIL---AKNRVISSGGTDKSVRVWKIQEES------QL--VFNGHSRGIDMTRRVNDQQ 327 (454)
Q Consensus 263 -~~~~~---~~~~~~~~v~~~~~~---~~~~~l~~~~~dg~i~i~d~~~~~------~~--~~~~~~~~i~~~~~~~~~~ 327 (454)
|..+. .+ .....|.++... .++.+++..+..|.++-..+.... .. .+......+..........
T Consensus 81 ~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 81 RGRPIVNLLPL-EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDE 159 (307)
T ss_dssp CCEEGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCE
T ss_pred CCeEhhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCE
Confidence 22211 12 123446555442 345678888999999988764211 11 2233333334444445667
Q ss_pred EEEEeCCCCEEEEecCCCccceeee-cccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcC
Q psy17902 328 FITCGEDGTLSLWSILKKVPTHTIP-VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKIT 394 (454)
Q Consensus 328 l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~ 394 (454)
++..+.+|.+..+....-....... ...... ......|.++...+++..|++.+..|.++-.++.
T Consensus 160 i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~--L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRAMGCNTTGVRGIR--LGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCBCCTTCCCEECCC--CCTTCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred EEEECCCCcEEEEEHHHcCccCCCCCCeEeEE--eCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 8889999998888764321111000 000000 0123346666655556678888999999988874
No 373
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=76.15 E-value=43 Score=29.99 Aligned_cols=241 Identities=9% Similarity=0.071 Sum_probs=118.9
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeccc------CCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEe
Q psy17902 145 ITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSS------PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS 218 (454)
Q Consensus 145 V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~ 218 (454)
|..++.. ..+.+.-..||.|..|-....-.+..- ............+..++++......+.-..+|.|+.|-
T Consensus 55 i~~i~~G--~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG 132 (389)
T 3kci_A 55 PVQLIGG--EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 132 (389)
T ss_dssp EEEEEEE--TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEE
T ss_pred eEEEEeC--CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEe
Confidence 4455433 345556677899999854332111000 00000001122455566766666677777889999996
Q ss_pred CCC---------cc---EEeecc-cCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-----------eEEEeec-cC
Q psy17902 219 SSL---------EH---LHTFTG-HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA-----------YVETLFG-HQ 273 (454)
Q Consensus 219 ~~~---------~~---~~~~~~-~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~-~~ 273 (454)
... .. ...+.. ....|..++.. ..+.++...+|.|+.|-....- ....+.. ..
T Consensus 133 ~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~ 210 (389)
T 3kci_A 133 EAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQG 210 (389)
T ss_dssp CCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTT
T ss_pred CCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCC
Confidence 411 00 111111 12256666554 4456666789999999754210 0111111 22
Q ss_pred CceeEEEeecCCCEEEEeeCCCcEEEeeccCCe----------EE--EEccccC-CeEEEEecCCCEEEEEeCCCCEEEE
Q psy17902 274 SAITSLDILAKNRVISSGGTDKSVRVWKIQEES----------QL--VFNGHSR-GIDMTRRVNDQQFITCGEDGTLSLW 340 (454)
Q Consensus 274 ~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------~~--~~~~~~~-~i~~~~~~~~~~l~~~~~dg~i~iw 340 (454)
..|..++........+.-..+|.|+.|-....- .. ....... .+..+. ....+.++-..+|.|..|
T Consensus 211 ~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~-~G~~hs~alt~~G~v~~w 289 (389)
T 3kci_A 211 HRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE-CGSQFSVALTKSGAVYTW 289 (389)
T ss_dssp SCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEE-EETTEEEEEETTSCEEEE
T ss_pred CeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEe-CCCCEEEEEeCCCeEEEE
Confidence 346666654323455556788999999643211 11 1111111 233222 234455666789999999
Q ss_pred ecCCCccc-------eeeecccCCCCCCCCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCC
Q psy17902 341 SILKKVPT-------HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396 (454)
Q Consensus 341 d~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~ 396 (454)
-......+ ...+..... .....|..++. .....++-..||.|+.|=....
T Consensus 290 G~n~~GqLG~g~~~~~~~P~~v~~----l~~~~v~~ia~--G~~h~~al~~~G~v~~wG~n~~ 346 (389)
T 3kci_A 290 GKGDYHRLGHGSDDHVRRPRQVQG----LQGKKVIAIAT--GSLHCVCCTEDGEVYTWGDNDE 346 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGG----GTTCCEEEEEE--CSSEEEEEETTCCEEEEECCTT
T ss_pred eCCCCCCCCCCCCccccCCeEecc----CCCCCEEEEEe--ccCeEEEECCCCCEEEeeCCCC
Confidence 75432111 000100000 01122555554 3335555678899999977543
No 374
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=75.87 E-value=8.2 Score=40.66 Aligned_cols=36 Identities=19% Similarity=0.252 Sum_probs=30.5
Q ss_pred EEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEe
Q psy17902 367 ITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFL 402 (454)
Q Consensus 367 i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 402 (454)
+.+++..++..++++-+.|+++|||++.++.++...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 556677788889999999999999999998776654
No 375
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.80 E-value=88 Score=32.90 Aligned_cols=38 Identities=13% Similarity=0.084 Sum_probs=30.6
Q ss_pred EEEEecCCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902 318 DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH 355 (454)
Q Consensus 318 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 355 (454)
..+...+..++++-+.|+++|+|++.+++++.+.....
T Consensus 242 s~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~~ 279 (1139)
T 4fhn_B 242 SMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 279 (1139)
T ss_dssp CCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEECCC
T ss_pred EeeccCCccEEEEEeCCCEEEEEECCCCCeEEeechhh
Confidence 33444566789999999999999999999998877644
No 376
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=69.06 E-value=50 Score=27.61 Aligned_cols=147 Identities=10% Similarity=0.003 Sum_probs=71.2
Q ss_pred EEEEeeCCCcEEEeeccCCe--EEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEecC---CCccceeeecccCCCCCC
Q psy17902 287 VISSGGTDKSVRVWKIQEES--QLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSIL---KKVPTHTIPVAHGYDSSS 361 (454)
Q Consensus 287 ~l~~~~~dg~i~i~d~~~~~--~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~ 361 (454)
.+++.+.+|.|+--...... .+.+......+........+.++..+..|.++-+... .....- .+...... .
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G-~~i~~~i~--L 80 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQG-EPLTGKLT--L 80 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCC-EEGGGTCC--C
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCC-eEeeeeec--C
Confidence 34445566666544433211 1122223333334444455667777888876655442 221100 00001111 0
Q ss_pred CCCCcEEEEEEecCCCEEEEecCCCcEEEEEcCCCc-----eeeEeccCCCceeeeEEEEc-CCCCEEEEEecCCCceee
Q psy17902 362 SEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKR-----TLEFLQDIPLSGVINSLVFT-SDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 362 ~~~~~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~v~~l~~s-~d~~~l~~~~~~d~~i~~ 435 (454)
.....|.++....++.+|+.++..|.++...+..-. -...+. ......+..+... .++..|+.. +.+|.+..
T Consensus 81 ~~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~-L~~~d~lv~~~~~~~~~~~i~l~-T~~G~~lr 158 (256)
T 1zvt_A 81 PPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALIT-LPENAHVMPPVVIEDASDMLLAI-TQAGRMLM 158 (256)
T ss_dssp CTTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBC-CCTTCCBCCCEECCCTTCEEEEE-ETTSEEEE
T ss_pred CCCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEE-ECCCCEEEEEEEecCCCCEEEEE-cCCCeEEE
Confidence 122346666443456678888999999999874321 111111 1123445555454 334556655 57787776
Q ss_pred eee
Q psy17902 436 WKT 438 (454)
Q Consensus 436 W~~ 438 (454)
+..
T Consensus 159 f~~ 161 (256)
T 1zvt_A 159 FPV 161 (256)
T ss_dssp EEG
T ss_pred EEH
Confidence 654
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=67.17 E-value=24 Score=34.50 Aligned_cols=36 Identities=11% Similarity=0.267 Sum_probs=29.7
Q ss_pred eEEEEecCCCEEEEEeCCCCEEEEecCCCccceeeec
Q psy17902 317 IDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353 (454)
Q Consensus 317 i~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 353 (454)
|.++ ..+..++++-+.|.++|+|++.+++++.....
T Consensus 224 Is~~-~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCK-LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEE-EETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEe-ccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4443 33577999999999999999999998888877
No 378
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.84 E-value=1.4e+02 Score=30.74 Aligned_cols=37 Identities=14% Similarity=0.081 Sum_probs=29.7
Q ss_pred EEEecCCCEEEEEeCCCCEEEEecCCCccceeeeccc
Q psy17902 319 MTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAH 355 (454)
Q Consensus 319 ~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 355 (454)
.+...+..++++-+.|+++|+|++.+++++.+.....
T Consensus 241 ~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~ 277 (950)
T 4gq2_M 241 MIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQ 277 (950)
T ss_dssp EEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECCC
T ss_pred EeecCCCcEEEEEECCCEEEEEECCCCCeEeeecccc
Confidence 3334456789999999999999999999988876543
No 379
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=61.33 E-value=91 Score=27.86 Aligned_cols=196 Identities=12% Similarity=0.164 Sum_probs=100.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccC-----Ccc-cCCCCCCceEEEEEeCCCcEEEEecCCCcEEEE
Q psy17902 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSP-----FVK-TDRKSYPPILALAVANNNELVASGDNNSNIKLW 217 (454)
Q Consensus 144 ~V~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw 217 (454)
.+..++++.-..+.+.-..+|.|..|-......+..-. .+. ........|..++.. ....++-..+|.|+.|
T Consensus 106 ~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 106 FIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTW 183 (389)
T ss_dssp CEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEE
T ss_pred ceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEe
Confidence 45667777766777777889999999644321110000 000 000011245555543 3345555668999999
Q ss_pred eCCC--c-------c---EEeec-ccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCce-----------eEEEeec-c
Q psy17902 218 SSSL--E-------H---LHTFT-GHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA-----------YVETLFG-H 272 (454)
Q Consensus 218 ~~~~--~-------~---~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-----------~~~~~~~-~ 272 (454)
-... + . ...+. .....|..++......+.++...+|.|+.|-....- ....+.. .
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~ 263 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 263 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGT
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccC
Confidence 7511 1 0 11111 122356666665433566667789999999654210 1111111 1
Q ss_pred CCceeEEEeecCCCEEEEeeCCCcEEEeeccCCe------------EEEEcccc-CCeEEEEecCCCEEEEEeCCCCEEE
Q psy17902 273 QSAITSLDILAKNRVISSGGTDKSVRVWKIQEES------------QLVFNGHS-RGIDMTRRVNDQQFITCGEDGTLSL 339 (454)
Q Consensus 273 ~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~------------~~~~~~~~-~~i~~~~~~~~~~l~~~~~dg~i~i 339 (454)
...|..|+.-. ...+.-..+|.|+.|-..... +....... ..+..+. ....+.++...+|.|+.
T Consensus 264 ~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia-~G~~h~~al~~~G~v~~ 340 (389)
T 3kci_A 264 GLGVVKVECGS--QFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA-TGSLHCVCCTEDGEVYT 340 (389)
T ss_dssp TSCEEEEEEET--TEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEE-ECSSEEEEEETTCCEEE
T ss_pred CCcEEEEeCCC--CEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEE-eccCeEEEECCCCCEEE
Confidence 22466665542 333444678999999653211 11111111 1233332 23445666688999999
Q ss_pred EecCC
Q psy17902 340 WSILK 344 (454)
Q Consensus 340 wd~~~ 344 (454)
|=...
T Consensus 341 wG~n~ 345 (389)
T 3kci_A 341 WGDND 345 (389)
T ss_dssp EECCT
T ss_pred eeCCC
Confidence 97654
No 380
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.64 E-value=55 Score=31.11 Aligned_cols=61 Identities=8% Similarity=0.094 Sum_probs=42.2
Q ss_pred CCeEEEEEcCCCCEEEEEeC------------CCcEEEEeCCCceeEEEeecc-CCceeEEEeecCCCEEEEee
Q psy17902 232 APITGLAISFECDTLYSSSN------------DRSIKVWNIEDRAYVETLFGH-QSAITSLDILAKNRVISSGG 292 (454)
Q Consensus 232 ~~v~~~~~~~~~~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~ 292 (454)
.....|.|.++|.+.++... ...|..++..+++....+.+. ...++.++|+||++.|+++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34567999999987764322 125777777777765555433 45789999999998877653
No 381
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=54.61 E-value=48 Score=31.73 Aligned_cols=58 Identities=10% Similarity=0.131 Sum_probs=40.3
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CcEEEEeCCCceeEEEeec-cCCceeEEEeecCCCEEEEe
Q psy17902 234 ITGLAISFECDTLYSSSND------------RSIKVWNIEDRAYVETLFG-HQSAITSLDILAKNRVISSG 291 (454)
Q Consensus 234 v~~~~~~~~~~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~ 291 (454)
.-.|+|+|.|.+++.-..+ ..+.+.+..+++..+.+.+ ....++.++|+|+++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4568999999866654322 2456667777776555544 35689999999999877654
No 382
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=53.28 E-value=1.9e+02 Score=28.96 Aligned_cols=158 Identities=13% Similarity=0.036 Sum_probs=0.0
Q ss_pred CCCeEEEEEcCC-CCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeC-CCcEEEEecCCCc----EE
Q psy17902 142 RASITCIAVTSD-SKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN-NNELVASGDNNSN----IK 215 (454)
Q Consensus 142 ~~~V~~~~~s~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~----v~ 215 (454)
.+.|.+|+++|. ...+++++..|.|...+=....-...........-....|.+|++.| +...++++..... -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Q ss_pred EEeC-CCccEEeecccC----------CCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC------CceeE
Q psy17902 216 LWSS-SLEHLHTFTGHK----------APITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ------SAITS 278 (454)
Q Consensus 216 vw~~-~~~~~~~~~~~~----------~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~ 278 (454)
||.. ++.......... ..+..++++|.....+.++....-.......++....+.... ..+..
T Consensus 94 v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~ 173 (789)
T 1sqj_A 94 FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGIGYTS 173 (789)
T ss_dssp EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTTTCEEE
T ss_pred EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCCCCeEE
Q ss_pred EEeec-CCCEEEEeeCC-CcEEE
Q psy17902 279 LDILA-KNRVISSGGTD-KSVRV 299 (454)
Q Consensus 279 ~~~~~-~~~~l~~~~~d-g~i~i 299 (454)
|.++| ++..++++..+ +.|+.
T Consensus 174 i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 174 VIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp EEECTTSTTCEEEEESSTTCEEE
T ss_pred EEECCCCCCEEEEEEcCCCeEEE
No 383
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.60 E-value=1.9e+02 Score=28.49 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=29.0
Q ss_pred cEEEEEEecCCCEEEEecCCCcEEEEEcCCCceeeEecc
Q psy17902 366 WITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQD 404 (454)
Q Consensus 366 ~i~~~~~s~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 404 (454)
.|.++.+ +..+|++-+.|.++|+|++.++.++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3665554 467999999999999999999987766543
No 384
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=51.01 E-value=66 Score=30.01 Aligned_cols=65 Identities=15% Similarity=0.129 Sum_probs=41.4
Q ss_pred cEEEEEEecC----CC--EEEEecCCCcEEEEEcC-CC-------ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCC
Q psy17902 366 WITSVACLHN----SD--LVASGSYDGCVKLWKIT-PK-------RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEH 431 (454)
Q Consensus 366 ~i~~~~~s~~----~~--~l~~~~~dg~v~iwd~~-~~-------~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~ 431 (454)
..++|+...- +. .++.|+.+|.|.=.-+. .+ ..+..+...+...+|..|.++++..+|+++ +..+
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~-s~~~ 483 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIG-STAG 483 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEE-BSSC
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEE-ECCe
Confidence 3677776542 43 68889999986544332 21 133344433346789999999999999998 3443
No 385
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=49.16 E-value=41 Score=31.84 Aligned_cols=60 Identities=20% Similarity=0.176 Sum_probs=40.2
Q ss_pred EEEEEEecCCC--EEEEecCCCcEEEEEcCCC----ceeeEeccCCCceeee-EEEEcCCCCEEEEE
Q psy17902 367 ITSVACLHNSD--LVASGSYDGCVKLWKITPK----RTLEFLQDIPLSGVIN-SLVFTSDHKHLVAG 426 (454)
Q Consensus 367 i~~~~~s~~~~--~l~~~~~dg~v~iwd~~~~----~~~~~~~~~~~~~~v~-~l~~s~d~~~l~~~ 426 (454)
+++|+....+. .++.|+.+|.|.=..+... ..+..+.......+|. .|.+++++.+|+++
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~ 468 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVM 468 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEE
Confidence 56666655443 6888999998766555433 1233343333356785 99999999999998
No 386
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=46.83 E-value=73 Score=22.45 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=14.6
Q ss_pred EEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902 194 LALAVANNNELVASGDNNSNIKLWSS 219 (454)
Q Consensus 194 ~~~~~~~~~~~l~~~~~dg~v~vw~~ 219 (454)
..+.+..+|++++... ++.+ +|..
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S 82 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVS 82 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEEC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEEC
Confidence 3567777887766543 3443 6765
No 387
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=44.03 E-value=1.4e+02 Score=24.85 Aligned_cols=142 Identities=12% Similarity=0.032 Sum_probs=75.3
Q ss_pred CEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC----C----CccE--
Q psy17902 155 KHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS----S----LEHL-- 224 (454)
Q Consensus 155 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~----~----~~~~-- 224 (454)
..+++.+.+|.|+--....... ..+.+ .....+..+........|+..+..|.++-+.. . +..+
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~-~~~~l-----ke~D~l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~ 76 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDA-PGLNY-----KAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTG 76 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCS-TTSCC-----CTTCCEEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGG
T ss_pred CEEEEEeCCCEEEEeeCCcCCc-eeccC-----CCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeee
Confidence 3566677888887665433211 11111 23334555544444455666667788766654 1 1111
Q ss_pred -EeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCc-------eeEEEeeccCCceeEEEee-cCCCEEEEeeCCC
Q psy17902 225 -HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR-------AYVETLFGHQSAITSLDIL-AKNRVISSGGTDK 295 (454)
Q Consensus 225 -~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~~-~~~~~l~~~~~dg 295 (454)
..+. ....|.++....++.+|+.++..|.++...+... .....+.. ...+..+... ..+..|+..+.+|
T Consensus 77 ~i~L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~-~d~lv~~~~~~~~~~~i~l~T~~G 154 (256)
T 1zvt_A 77 KLTLP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPE-NAHVMPPVVIEDASDMLLAITQAG 154 (256)
T ss_dssp TCCCC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCT-TCCBCCCEECCCTTCEEEEEETTS
T ss_pred eecCC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECC-CCEEEEEEEecCCCCEEEEEcCCC
Confidence 1122 2345666644345677889999999998887432 22222322 2334333333 2344566677777
Q ss_pred cEEEeeccC
Q psy17902 296 SVRVWKIQE 304 (454)
Q Consensus 296 ~i~i~d~~~ 304 (454)
.+..+.+..
T Consensus 155 ~~lrf~~~e 163 (256)
T 1zvt_A 155 RMLMFPVSD 163 (256)
T ss_dssp EEEEEEGGG
T ss_pred eEEEEEHHH
Confidence 777776653
No 388
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=42.38 E-value=1.7e+02 Score=26.04 Aligned_cols=87 Identities=13% Similarity=0.147 Sum_probs=59.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCC--eEEEEEcCCCceecccCCcccCCCCCCce-EEEEEeCCCcEEEEecCCCcEEE
Q psy17902 141 HRASITCIAVTSDSKHVYSAC-KDG--IIIKWLLETRSKVCSSPFVKTDRKSYPPI-LALAVANNNELVASGDNNSNIKL 216 (454)
Q Consensus 141 h~~~V~~~~~s~~~~~l~~~~-~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~dg~v~v 216 (454)
....+.... +++..+|+.-. ... .|.++|+.+.+....+++....+..-+.+ .++.+.....+++++.....|.+
T Consensus 27 ~~~~l~~~~-~~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~~~i~l 105 (369)
T 3s9j_A 27 LSKSMFQFE-ENGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNISRLSS 105 (369)
T ss_dssp CCSSEEEEE-ETTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGGTEEEE
T ss_pred cccceEEEe-cCCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCcceEEE
Confidence 334455555 55555665444 346 89999999999888887766554444455 35666677777777766667888
Q ss_pred EeCCCccEEeec
Q psy17902 217 WSSSLEHLHTFT 228 (454)
Q Consensus 217 w~~~~~~~~~~~ 228 (454)
.|..++.+..+.
T Consensus 106 ~n~~G~~~~k~~ 117 (369)
T 3s9j_A 106 INSQGEIIRNYN 117 (369)
T ss_dssp ECTTCCEEEEEE
T ss_pred ECCCceEEEEEe
Confidence 999888877654
No 389
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=40.70 E-value=79 Score=30.77 Aligned_cols=65 Identities=15% Similarity=0.218 Sum_probs=40.8
Q ss_pred EEEEEEe----cCCC--EEEEecCCCcEE-EEEcCCCc-------eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCc
Q psy17902 367 ITSVACL----HNSD--LVASGSYDGCVK-LWKITPKR-------TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHR 432 (454)
Q Consensus 367 i~~~~~s----~~~~--~l~~~~~dg~v~-iwd~~~~~-------~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~ 432 (454)
.+.|+.+ ++|+ .++.|+.+|.|. +.....+. .+..+.......+|..|.++++..+|+++ +..+.
T Consensus 414 lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~-t~~~V 492 (667)
T 4gz8_A 414 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIG-STAGV 492 (667)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEE-BSSCE
T ss_pred eeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEE-ECCEE
Confidence 4556553 2343 688899999864 33322221 33344444567789999999999999998 44443
No 390
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=34.49 E-value=3.1e+02 Score=26.07 Aligned_cols=217 Identities=6% Similarity=0.050 Sum_probs=102.6
Q ss_pred eEEEEEcCCCceecccCCcccCCC-------CCCceEEEEEeCCCc-EEEEecCCCcEEEEeCCCccEEee-cccCCCeE
Q psy17902 165 IIIKWLLETRSKVCSSPFVKTDRK-------SYPPILALAVANNNE-LVASGDNNSNIKLWSSSLEHLHTF-TGHKAPIT 235 (454)
Q Consensus 165 ~i~iwd~~~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~~~-~l~~~~~dg~v~vw~~~~~~~~~~-~~~~~~v~ 235 (454)
.|..||..+++......+.....+ ....+....+.-||+ -|+.|+. ++|-++..+... .+|...+.
T Consensus 293 ~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~Gs~-----~iD~dG~~L~st~~gHGDa~h 367 (591)
T 2zux_A 293 MLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIFGSM-----AVDHDGKGMYSTGLGHGDALH 367 (591)
T ss_dssp EEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEETTE-----EECTTSCEEEECSCCCCSCEE
T ss_pred EEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEEeee-----EECCCCCEeeeCCCCCCCeeE
Confidence 477788776654332222111100 011333344445554 3443331 333344444333 37888888
Q ss_pred EEEEcCC--CCEEEEEeCCC----cEEEEeCCCceeEEEeecc--CCceeEEEeecCC--CEEEEeeCCCcEEEeeccCC
Q psy17902 236 GLAISFE--CDTLYSSSNDR----SIKVWNIEDRAYVETLFGH--QSAITSLDILAKN--RVISSGGTDKSVRVWKIQEE 305 (454)
Q Consensus 236 ~~~~~~~--~~~l~~~~~dg----~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~--~~l~~~~~dg~i~i~d~~~~ 305 (454)
...|.|+ |-.++.+..++ -..+.|..+++.+...... .+......|.|+. --+.+ ++ .+|+....
T Consensus 368 v~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~~~d~Gr~~~~Didp~~pG~E~w~---~~--~l~~~~G~ 442 (591)
T 2zux_A 368 TGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYAGKDVGRGMAADIDPRYPGQEVWA---NG--SLYSAKGV 442 (591)
T ss_dssp EECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECCSSCCCCEEEECCCTTSSSCEEEE---TT--EEECTTSC
T ss_pred EeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCCCCCCCceeEEecCCCCCceEEEe---cC--ceECCCCC
Confidence 8888887 44666665541 3556899999988776532 3444445555653 22332 22 46665442
Q ss_pred eEEEEccccCCeE-EEEecCC--CEEEEEeCCCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEEecCCC--EEE
Q psy17902 306 SQLVFNGHSRGID-MTRRVND--QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD--LVA 380 (454)
Q Consensus 306 ~~~~~~~~~~~i~-~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~--~l~ 380 (454)
..... ....+. .++|..+ ..++- .+.|.-|+...+.....+..............+..+..+.-|.+ +|+
T Consensus 443 ~i~~~--~p~~~N~~i~WdGDl~relld---~~~i~k~~~~~~~~~~l~~~~g~~snngtk~~P~l~aDi~GDwREEvI~ 517 (591)
T 2zux_A 443 KIGSG--VPSSTNFGIWWDGDLLREQLD---SNRIDKWDYQNGVSKNMLTASGAAANNGTKATPTLQADLLGDWREEVVW 517 (591)
T ss_dssp BCSSC--CCSCCSEEECCSSSSSCEEEE---TTEEEEEETTTTEEEEEEECTTEECBSGGGCBCSEEECCSSSSSCEEEE
T ss_pred EecCC--CCCCcceeEEECCCCcHhhhC---CceEEecccCCCceeEEEeecccccCCCCCCCEeeEEeccccCeeEEEE
Confidence 22111 111222 2444322 23333 23677888766653333322211100001122233333333433 444
Q ss_pred EecCCCcEEEEEcCCC
Q psy17902 381 SGSYDGCVKLWKITPK 396 (454)
Q Consensus 381 ~~~~dg~v~iwd~~~~ 396 (454)
-...+..|+||.....
T Consensus 518 ~t~D~~~LrIYtt~~p 533 (591)
T 2zux_A 518 RTEDSSALRIYTTTIP 533 (591)
T ss_dssp EETTSSEEEEECCCCC
T ss_pred EeCCCCeEEEEeCCCC
Confidence 4445557999986544
No 391
>1zvu_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 3.00A {Escherichia coli}
Probab=33.18 E-value=2.4e+02 Score=27.56 Aligned_cols=120 Identities=10% Similarity=0.033 Sum_probs=0.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCe---EEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeC
Q psy17902 143 ASITCIAVTSDSKHVYSACKDGI---IIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSS 219 (454)
Q Consensus 143 ~~V~~~~~s~~~~~l~~~~~dg~---i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~ 219 (454)
+.|..+........|+.-+..|. +.+|++.........-...........|.++....+..+|+.++..|.++...+
T Consensus 503 D~~~~~~~~~t~d~ll~ft~~Gr~y~~~~~~lP~~~~~G~~i~~ll~l~~~e~i~~~~~~~~~~~l~~~T~~G~vk~~~l 582 (716)
T 1zvu_A 503 DSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTF 582 (716)
T ss_dssp --CCEEECCCSSSCEEEEETTSEEEEECTTTSCCCC---CBSTTTSCCCTTCCEEEEECCCTTCEEEEEBTTSEEEEEEG
T ss_pred CeEEEEEEecCCCEEEEEecCCcEEEEEeeecccccccCeeHHhccCCCCCCeEEEEEEecCCceEEEEeCCceEEEecH
Q ss_pred --------CCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q psy17902 220 --------SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIED 262 (454)
Q Consensus 220 --------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 262 (454)
.+.....+.....-|........+..++.++.+|.+..|....
T Consensus 583 ~~~~~~~~~g~~ai~L~~~d~lv~~~~~~~~~~~v~l~t~~g~~lrf~~~~ 633 (716)
T 1zvu_A 583 NDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 633 (716)
T ss_dssp GGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEEEESTT
T ss_pred HHhcccCccceEEEeeCCCCEEEEEEEecCCCCEEEEEeCCCeEEEEEHHH
No 392
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=30.46 E-value=1.6e+02 Score=28.21 Aligned_cols=66 Identities=9% Similarity=0.094 Sum_probs=40.5
Q ss_pred EEEEEEe----cCC---CEEEEecCCCcEEEEEcCCCc------eeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCce
Q psy17902 367 ITSVACL----HNS---DLVASGSYDGCVKLWKITPKR------TLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRF 433 (454)
Q Consensus 367 i~~~~~s----~~~---~~l~~~~~dg~v~iwd~~~~~------~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i 433 (454)
.+.|+.. .++ ..++.|+.+|.|.-.-+.... .+..+.......+|..|.++++..+|+++ +..+.+
T Consensus 364 ~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~-s~~~V~ 442 (590)
T 3nvq_A 364 YQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVS-SQWEVS 442 (590)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEE-CSSEEE
T ss_pred EEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEE-ecceEE
Confidence 5556654 244 377889999987644332211 12223322346789999999999999988 444443
No 393
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=29.25 E-value=1.5e+02 Score=20.70 Aligned_cols=76 Identities=11% Similarity=0.180 Sum_probs=36.0
Q ss_pred EEEEEeCCCcEEEEecCCCcEEEEeCCCccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccC
Q psy17902 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQ 273 (454)
Q Consensus 194 ~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 273 (454)
..+.|..+|++++.- . .-.+|...... ...-..+.+..+|++++... ++. .+|.-.+ ...
T Consensus 22 ~~l~~~~dGnlvl~~--~-~~~vW~sn~~~-------~~~~~~l~l~~dGNLVl~~~-~~~-~~W~S~t--------~~~ 81 (110)
T 3a0c_A 22 YRLIMQGDCNFVLYD--S-GKPVWASNTGG-------LGSGCRLTLHNNGNLVIYDQ-SNR-VIWQTKT--------NGK 81 (110)
T ss_dssp EEEEECTTSCEEEEE--T-TEEEEECCCTT-------SCSSCEEEECTTSCEEEECT-TCC-EEEECCC--------CCS
T ss_pred EEEEEcCCCcEEEEE--C-CEEEEECCCCC-------CCCcEEEEEeCCCCEEEECC-CCc-EEEecCC--------CCC
Confidence 345566666655543 1 23456652211 11123456666776655532 343 3666432 111
Q ss_pred CceeEEEeecCCCEEE
Q psy17902 274 SAITSLDILAKNRVIS 289 (454)
Q Consensus 274 ~~v~~~~~~~~~~~l~ 289 (454)
.....+.+.++|++++
T Consensus 82 ~g~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 82 EDHYVLVLQQDRNVVI 97 (110)
T ss_dssp SSCCEEEECTTSCEEE
T ss_pred CCCEEEEEeCCccEEE
Confidence 2233566667776554
No 394
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=28.73 E-value=3.2e+02 Score=24.47 Aligned_cols=221 Identities=8% Similarity=-0.031 Sum_probs=0.0
Q ss_pred EEEeCCCcEEEEecCCCcEEEEeCCC-------------ccEEeecccCCCeEEEEEcCCCCEEEEEeCCCcEEEEeC--
Q psy17902 196 LAVANNNELVASGDNNSNIKLWSSSL-------------EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI-- 260 (454)
Q Consensus 196 ~~~~~~~~~l~~~~~dg~v~vw~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~-- 260 (454)
+.++..+...+.-..+|.|+.|-.+. ...-........|..|+.. ..+.++...+|.|+.|-.
T Consensus 78 ~~va~G~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~~~i~~va~G--~~hs~al~~~G~v~~wG~~~ 155 (423)
T 3mvd_K 78 VDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALCISAG--DSHSACLLEDGRVFAWGSFR 155 (423)
T ss_dssp EEEEECSSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECCCSSCEEEEEEC--SSEEEEEETTSCEEEEECEE
T ss_pred eEEeeCCCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEcCCCCEEEEEcC--cCeEEEEeCCCeEEEEeCCC
Q ss_pred ----------CCceeEEEeeccCCceeEEEeecCCCEEEEeeCCCcEEEee------------------------ccCCe
Q psy17902 261 ----------EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWK------------------------IQEES 306 (454)
Q Consensus 261 ----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d------------------------~~~~~ 306 (454)
...............|..|+. ...+.+.-..+|.|+.|- .....
T Consensus 156 n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~p 233 (423)
T 3mvd_K 156 DSHGNMGLTIDGNKRTPIDLMEGTVCCSIAS--GADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRP 233 (423)
T ss_dssp CSSSEEESBTTBCEEEEEESSTTCCEEEEEE--CSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTTTTTTTSSC
T ss_pred CCCCCcCcCCCCCCceeeEecCCCcEEEEec--CCCeEEEEecCCeEEEeeCCcCCccCCCcccccccccccccccccCC
Q ss_pred EEEEccccCCeEEEEecCCCEEEEEeCCCCEEEE-----------ecCCCccceeeecccCCCCCCCCCCcEEEEEEecC
Q psy17902 307 QLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLW-----------SILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375 (454)
Q Consensus 307 ~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iw-----------d~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~ 375 (454)
..........+..+.......++.-..+|.|..| +................ |..|+. .
T Consensus 234 ~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~---------v~~ia~--G 302 (423)
T 3mvd_K 234 TQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKD---------IRHIAG--G 302 (423)
T ss_dssp EEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCS---------EEEEEE--C
T ss_pred eEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCC---------eEEEEc--c
Q ss_pred CCEEEEecCCCcEEEEEcCCC------------ceeeEeccCCCceeeeEEEEcCCCCEEEEEecCCCceeee
Q psy17902 376 SDLVASGSYDGCVKLWKITPK------------RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW 436 (454)
Q Consensus 376 ~~~l~~~~~dg~v~iwd~~~~------------~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~~~~d~~i~~W 436 (454)
....++-..+|.|+.|=.... .....+..... .|..++.. ..+.++- ..+|.|+.|
T Consensus 303 ~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~--~v~~ia~G--~~hs~al-t~~G~v~~w 370 (423)
T 3mvd_K 303 QHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE--KIVSVGCG--EVCSYAV-TIDGKLYSW 370 (423)
T ss_dssp SSEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCS--CEEEEEEE--TTEEEEE-ETTSCEEEE
T ss_pred cCeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCC--CEEEEEcC--CCeEEEE-cCCCCEEEE
No 395
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=27.98 E-value=2e+02 Score=27.00 Aligned_cols=67 Identities=13% Similarity=0.129 Sum_probs=42.1
Q ss_pred EEEEEEecCC--CEEEEecCCCcEEEEEcC-CC--ceeeEeccCCCceee-eEEEEcCCCCEEEEEecCCCceee
Q psy17902 367 ITSVACLHNS--DLVASGSYDGCVKLWKIT-PK--RTLEFLQDIPLSGVI-NSLVFTSDHKHLVAGIGTEHRFGR 435 (454)
Q Consensus 367 i~~~~~s~~~--~~l~~~~~dg~v~iwd~~-~~--~~~~~~~~~~~~~~v-~~l~~s~d~~~l~~~~~~d~~i~~ 435 (454)
.++|+...-. ..++.|+.+|.|.-.-+. .+ ..+..+.. ....+| ..|.++++..+|+++ +..+.+++
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~-s~~~V~~v 461 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVM-TQSTLLKV 461 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEE-CSSCEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEE-eCCEEEEE
Confidence 5666665422 367788999987654443 21 23344433 345678 489999999999988 45544433
No 396
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=26.62 E-value=3.4e+02 Score=24.15 Aligned_cols=173 Identities=6% Similarity=0.009 Sum_probs=88.6
Q ss_pred cEEEEeCCCc--eeEEEeec------cCCceeEEEee---cC----CCEEEEee-CCCcEEEeeccCCeEEEEccccC-C
Q psy17902 254 SIKVWNIEDR--AYVETLFG------HQSAITSLDIL---AK----NRVISSGG-TDKSVRVWKIQEESQLVFNGHSR-G 316 (454)
Q Consensus 254 ~i~iwd~~~~--~~~~~~~~------~~~~v~~~~~~---~~----~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~-~ 316 (454)
.|.+||+.+. +.++.+.- ..+.+..+.+. |. +.++..+. ..+.|.|+|+.+++...+..+.- +
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5777888887 77766532 23557788887 22 33444333 46789999999988764432110 0
Q ss_pred -eEEEE--------ecCCCEEEEEeCC----CCEEEEecCCCccceeeecccCCC----------CCCCCCCcEEEEEEe
Q psy17902 317 -IDMTR--------RVNDQQFITCGED----GTLSLWSILKKVPTHTIPVAHGYD----------SSSSEPNWITSVACL 373 (454)
Q Consensus 317 -i~~~~--------~~~~~~l~~~~~d----g~i~iwd~~~~~~~~~~~~~~~~~----------~~~~~~~~i~~~~~s 373 (454)
..... +..+-.=++-+.+ +....|-.-++..+..++...-.. ...+....-..+++.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 00000 1111111222222 344444433333333332110000 000011224456675
Q ss_pred -cCCCEEEEecCCCcEEEEEcCC-C---ceeeEeccCCCceeeeEEEEcCCCCEEEEE
Q psy17902 374 -HNSDLVASGSYDGCVKLWKITP-K---RTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426 (454)
Q Consensus 374 -~~~~~l~~~~~dg~v~iwd~~~-~---~~~~~~~~~~~~~~v~~l~~s~d~~~l~~~ 426 (454)
.+|.++++--..+.|..|+... . ..+..+...+.-..+.++.+.++|...+.+
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred CCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 5777777777788899999875 1 223333322234467888888888766655
No 397
>2lsj_B DNA polymerase kappa; REV1, RIR, POL kappa, translesion synthesis, TLS, CTD, prote binding-protein binding complex; HET: DNA; NMR {Mus musculus}
Probab=32.10 E-value=14 Score=17.90 Aligned_cols=11 Identities=27% Similarity=0.510 Sum_probs=6.8
Q ss_pred chhhccCCCcc
Q psy17902 2 SFFIRNKKPAA 12 (454)
Q Consensus 2 ~~~~~~~~~~~ 12 (454)
|||-|+|-+++
T Consensus 8 SFFdKKRser~ 18 (26)
T 2lsj_B 8 SFFDKKRSERI 18 (26)
Confidence 57777666543
No 398
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=25.96 E-value=4.3e+02 Score=25.06 Aligned_cols=60 Identities=18% Similarity=0.218 Sum_probs=39.6
Q ss_pred CCCEEEEecCCCccceeeecccCCCCCCCCCCcEEEEEE-ecCC----CEEEEecCCCcEEEEEcCCCc
Q psy17902 334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC-LHNS----DLVASGSYDGCVKLWKITPKR 397 (454)
Q Consensus 334 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-s~~~----~~l~~~~~dg~v~iwd~~~~~ 397 (454)
...|.|+|+.++..+..+...... .....+..+.. ..++ .++.+|...|.|.-+|+....
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~----~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~GnlWRfDl~~~~ 286 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRT----GVPNGLSSPRLADNNSDGVADYAYAGDLQGNLWRFDLIAGK 286 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCST----TSCCCEEEEEEECTTSSSBCCEEEEEETTSEEEEEECSCSS
T ss_pred ccEEEEEECCCCceEEEEecCCCC----ccCCccccceEEecCCCCceeEEEEEeCCCcEEEEEcCCCC
Confidence 357999999999988887654211 11222444433 2333 389999999999999997653
No 399
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=25.62 E-value=1.2e+02 Score=28.71 Aligned_cols=70 Identities=17% Similarity=0.138 Sum_probs=43.8
Q ss_pred CCeEEEEEcCCC--CEEEEEeCCCeEEEEEcCCCc----eecccCCcccCCCCCCceE-EEEEeCCCcEEEEecCCCcEE
Q psy17902 143 ASITCIAVTSDS--KHVYSACKDGIIIKWLLETRS----KVCSSPFVKTDRKSYPPIL-ALAVANNNELVASGDNNSNIK 215 (454)
Q Consensus 143 ~~V~~~~~s~~~--~~l~~~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~v~ 215 (454)
...++|+....+ ..++.|+.+|.|.-..+.... ....+.. . ....+|. .|.+++++.+|++++..+.++
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v---~-~~~~pv~~~l~~~~~~~~Lyv~s~~~V~k 475 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSV---F-KDGSPILRDMAFSINQLYLYVMSERQVTR 475 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEEC---C-TTCCCCCSCCEECTTSSEEEEECSSEEEE
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEe---e-cCCCccccceEEccCCCeEEEEeccccce
Confidence 357777766533 467789999988666554321 1111111 1 1234775 899999999999998776555
Q ss_pred E
Q psy17902 216 L 216 (454)
Q Consensus 216 v 216 (454)
|
T Consensus 476 v 476 (539)
T 3al9_A 476 V 476 (539)
T ss_dssp E
T ss_pred e
Confidence 4
No 400
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=25.28 E-value=1.8e+02 Score=20.33 Aligned_cols=13 Identities=8% Similarity=-0.069 Sum_probs=7.3
Q ss_pred EEEEcCCCCEEEE
Q psy17902 236 GLAISFECDTLYS 248 (454)
Q Consensus 236 ~~~~~~~~~~l~~ 248 (454)
.+.+..+|++++.
T Consensus 53 ~l~l~~dGNLVl~ 65 (111)
T 3mez_A 53 TLRLNNRGQLEIH 65 (111)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEEcCCCcEEEE
Confidence 4556666665554
No 401
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=24.46 E-value=2.4e+02 Score=26.28 Aligned_cols=69 Identities=14% Similarity=0.202 Sum_probs=42.6
Q ss_pred CeEEEEEcC----CC--CEEEEEeCCCeEEEEEcCCCce--------ecccCCcccCCCCCCceEEEEEeCCCcEEEEec
Q psy17902 144 SITCIAVTS----DS--KHVYSACKDGIIIKWLLETRSK--------VCSSPFVKTDRKSYPPILALAVANNNELVASGD 209 (454)
Q Consensus 144 ~V~~~~~s~----~~--~~l~~~~~dg~i~iwd~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 209 (454)
..++|+... ++ ..++.|+.+|.|.-.-+..... +..+.. . ....+|..|.++++..+|++++
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v---~-~~~~pI~~m~l~~~~~~Lyv~s 480 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTV---F-REPTTISAMELSTKQQQLYIGS 480 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECC---S-SSCCCCCEEEEETTTTEEEEEB
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEee---c-CCCCccceEEEcCCCCEEEEEE
Confidence 467776653 23 3577899999875544332211 111111 0 1346889999999999999999
Q ss_pred CCCcEEE
Q psy17902 210 NNSNIKL 216 (454)
Q Consensus 210 ~dg~v~v 216 (454)
.++.++|
T Consensus 481 ~~~V~~v 487 (495)
T 1q47_A 481 TAGVAQL 487 (495)
T ss_dssp SSCEEEE
T ss_pred CCeEEEE
Confidence 8876655
No 402
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=24.00 E-value=2.2e+02 Score=27.73 Aligned_cols=64 Identities=13% Similarity=0.143 Sum_probs=40.9
Q ss_pred EEEEEEe----cCCC---EEEEecCCCcEEEE-EcCCC-ceeeEeccCCCceeeeEEEEcCCC--CEEEEEecCCC
Q psy17902 367 ITSVACL----HNSD---LVASGSYDGCVKLW-KITPK-RTLEFLQDIPLSGVINSLVFTSDH--KHLVAGIGTEH 431 (454)
Q Consensus 367 i~~~~~s----~~~~---~l~~~~~dg~v~iw-d~~~~-~~~~~~~~~~~~~~v~~l~~s~d~--~~l~~~~~~d~ 431 (454)
.++|+.. .+++ .++.|+.+|.|.=. ..... ..+..+.......+|..|.++++. .+|+++ +..+
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~-s~~~ 473 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAG-SNSG 473 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEE-CSSC
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEE-EcCe
Confidence 5666654 2333 78889999986433 33332 233334444456789999999998 899888 3443
No 403
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=23.28 E-value=2e+02 Score=20.34 Aligned_cols=44 Identities=11% Similarity=0.134 Sum_probs=21.2
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCceeEEEeeccCCceeEEEeecCCCEEE
Q psy17902 236 GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVIS 289 (454)
Q Consensus 236 ~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 289 (454)
.+.+..+|++++.. .++. .+|...+. .......+.+.++|++++
T Consensus 64 ~l~l~~dGNLVl~d-~~~~-~lW~S~~~--------~~~g~~~l~l~~~Gnlvl 107 (119)
T 1b2p_A 64 RAVLQPDGVLVVIT-NENV-TVWQSPVA--------GKAGHYVLVLQPDRNVVI 107 (119)
T ss_dssp EEEECTTSCEEEEC-TTCC-EEEECSCC--------CCSSCEEEEECTTSCEEE
T ss_pred EEEEccCCEEEEEe-CCCc-EEEcCCCC--------CCCCCEEEEEECCCcEEE
Confidence 45566666665553 2333 35654321 111234456666666544
No 404
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.57 E-value=2e+02 Score=20.07 Aligned_cols=47 Identities=4% Similarity=0.060 Sum_probs=24.9
Q ss_pred eEEEeecCCCEEEEeeCCCcEEEeeccCCeEEEEccccCCeEEEEecCCCEEEEEeCCCCEEEEe
Q psy17902 277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWS 341 (454)
Q Consensus 277 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~iwd 341 (454)
..+.+..+|++++... ++.+ +|...+.. . .+.+.++--.||.+.+|+
T Consensus 59 ~~l~l~~dGNLVl~d~-~~~~-iW~S~t~~------~----------~~~~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 59 CFMRLGHSGELDITDD-RLNT-VFVSNTVG------Q----------EGDYVLILQINGQAVVYG 105 (113)
T ss_dssp CEEEECTTSCEEEECT-TSCE-EEECSCCC------S----------SSCCEEEECTTSCEEEEC
T ss_pred EEEEEeCCCcEEEECC-CCCE-EEECCCcC------C----------CCCEEEEEcCCceEEEec
Confidence 3466667777766532 3433 66654321 0 112344555677777775
No 405
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=21.72 E-value=2.1e+02 Score=19.87 Aligned_cols=76 Identities=17% Similarity=0.239 Sum_probs=37.8
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEEcCCCceecccCCcccCCCCCCceEEEEEeCCCcEEEEecCCCcEEEEeCCCccEE
Q psy17902 146 TCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLH 225 (454)
Q Consensus 146 ~~~~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw~~~~~~~~ 225 (454)
..+.|..+|++++.- .+ -.+|...+.. ...-..+.+..+|++++... ++. .+|.....
T Consensus 22 ~~l~~~~dGnlvl~~--~~-~~vW~sn~~~--------------~~~~~~l~l~~dGNLVl~~~-~~~-~~W~S~t~--- 79 (110)
T 3a0c_A 22 YRLIMQGDCNFVLYD--SG-KPVWASNTGG--------------LGSGCRLTLHNNGNLVIYDQ-SNR-VIWQTKTN--- 79 (110)
T ss_dssp EEEEECTTSCEEEEE--TT-EEEEECCCTT--------------SCSSCEEEECTTSCEEEECT-TCC-EEEECCCC---
T ss_pred EEEEEcCCCcEEEEE--CC-EEEEECCCCC--------------CCCcEEEEEeCCCCEEEECC-CCc-EEEecCCC---
Confidence 455666666665543 22 3456544321 01123466777888766643 343 46764211
Q ss_pred eecccCCCeEEEEEcCCCCEEE
Q psy17902 226 TFTGHKAPITGLAISFECDTLY 247 (454)
Q Consensus 226 ~~~~~~~~v~~~~~~~~~~~l~ 247 (454)
.......+.+.++|++++
T Consensus 80 ----~~~g~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 80 ----GKEDHYVLVLQQDRNVVI 97 (110)
T ss_dssp ----CSSSCCEEEECTTSCEEE
T ss_pred ----CCCCCEEEEEeCCccEEE
Confidence 111233456666666444
No 406
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=20.70 E-value=2.2e+02 Score=19.80 Aligned_cols=23 Identities=30% Similarity=0.530 Sum_probs=12.2
Q ss_pred EEEEeCCCcEEEEecCCCcEEEEe
Q psy17902 195 ALAVANNNELVASGDNNSNIKLWS 218 (454)
Q Consensus 195 ~~~~~~~~~~l~~~~~dg~v~vw~ 218 (454)
.+.+..+|++++... ++.+.+|.
T Consensus 53 ~l~l~~dGNLVl~~~-~~~~~vW~ 75 (111)
T 3mez_A 53 TLRLNNRGQLEIHSA-NSNTPVWV 75 (111)
T ss_dssp EEEECTTSCEEEECS-SCSSCSEE
T ss_pred EEEEcCCCcEEEEeC-CCCEEEEE
Confidence 456667777655533 23333553
Done!