RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy17902
(454 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 102 bits (253), Expect = 7e-25
Identities = 51/311 (16%), Positives = 104/311 (33%), Gaps = 68/311 (21%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS--------------------- 179
HR+ +T + + SA +D I W ET +
Sbjct: 16 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 75
Query: 180 ----------------SPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH 223
+ + N + +V++ + + +
Sbjct: 76 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 135
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD--- 280
+ TFTGH+ + + + + + S SND++++VW + + L H+ + +
Sbjct: 136 VKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAP 195
Query: 281 -----------------ILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGI-DMTR 321
+ SG DK++++W + L GH + +
Sbjct: 196 ESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 255
Query: 322 RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVAS 381
+ ++C +D TL +W K T+ AH +++TS+ + V +
Sbjct: 256 HSGGKFILSCADDKTLRVWDYKNKRCMKTLN-AH--------EHFVTSLDFHKTAPYVVT 306
Query: 382 GSYDGCVKLWK 392
GS D VK+W+
Sbjct: 307 GSVDQTVKVWE 317
Score = 84.4 bits (207), Expect = 1e-18
Identities = 51/267 (19%), Positives = 91/267 (34%), Gaps = 57/267 (21%)
Query: 215 KLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQS 274
K W + +GH++P+T + + S+S D +IKVW+ E + TL GH
Sbjct: 1 KEWIPRPPEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD 60
Query: 275 AITSL------------------------------------------DILAKNRVISSGG 292
++ + I+ I S
Sbjct: 61 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 120
Query: 293 TDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHT 350
DK++++W++Q + F GH + M R D +C D T+ +W + K
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180
Query: 351 IP-----------VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
+ SS SE + + SGS D +K+W ++ L
Sbjct: 181 LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 240
Query: 400 EFLQDIPLSGVINSLVFTSDHKHLVAG 426
L + ++F S K +++
Sbjct: 241 MTLVG--HDNWVRGVLFHSGGKFILSC 265
Score = 84.0 bits (206), Expect = 1e-18
Identities = 42/231 (18%), Positives = 90/231 (38%), Gaps = 29/231 (12%)
Query: 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPP 192
H +++ +++ + H+ SA +D I W ++T V + + + P
Sbjct: 92 ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRP 151
Query: 193 ILALAVANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDT------ 245
+ L+AS N+ +++W ++ E H+ + ++ + E
Sbjct: 152 ------NQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEA 205
Query: 246 --------------LYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSG 291
L S S D++IK+W++ + TL GH + + + + + I S
Sbjct: 206 TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC 265
Query: 292 GTDKSVRVWKIQEESQL-VFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLW 340
DK++RVW + + + N H + + +T D T+ +W
Sbjct: 266 ADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 316
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 97.1 bits (240), Expect = 6e-23
Identities = 60/358 (16%), Positives = 125/358 (34%), Gaps = 75/358 (20%)
Query: 84 LEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLRVNIADRLANATVVCTKFNGKPHRA 143
L + + K ++ D++ L + + R+ + R G H A
Sbjct: 7 LRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRR--------TLRG--HLA 56
Query: 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE 203
I + +DS+ + SA +DG +I W ++ V ++ A A +
Sbjct: 57 KIYAMHWGTDSRLLVSASQDGKLIIW------DSYTTNKVHAIPLRSSWVMTCAYAPSGN 110
Query: 204 LVASGDNNSNIKLWSSSLEHL--------------------------------------- 224
VA G ++ +++
Sbjct: 111 YVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWD 170
Query: 225 -------HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT 277
TFTGH + L+++ + S + D S K+W++ + +T GH+S I
Sbjct: 171 IETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230
Query: 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRV----NDQQFITCGE 333
++ ++G D + R++ ++ + +L+ H I V + + + +
Sbjct: 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD 290
Query: 334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
D ++W LK + H N ++ + + VA+GS+D +K+W
Sbjct: 291 DFNCNVWDALKADRAGVLA-GH--------DNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 83.6 bits (205), Expect = 3e-18
Identities = 17/122 (13%), Positives = 43/122 (35%), Gaps = 5/122 (4%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
H + I I + + D + + + I +++
Sbjct: 223 TGHESDINAICFFPNGNAFATGSDDATCRLF----DLRADQELMTYSHDNIICGITSVSF 278
Query: 199 ANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV 257
+ + L+ +G ++ N +W + GH ++ L ++ + + + S D +K+
Sbjct: 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKI 338
Query: 258 WN 259
WN
Sbjct: 339 WN 340
Score = 81.7 bits (200), Expect = 1e-17
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 5/147 (3%)
Query: 200 NNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKV- 257
+ L SG +++ KLW TFTGH++ I + + + S+D + ++
Sbjct: 194 PDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLF 253
Query: 258 -WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSR 315
+ + ITS+ R++ +G D + VW + + V GH
Sbjct: 254 DLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN 313
Query: 316 GI-DMTRRVNDQQFITCGEDGTLSLWS 341
+ + + T D L +W+
Sbjct: 314 RVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 64.4 bits (155), Expect = 6e-12
Identities = 38/253 (15%), Positives = 76/253 (30%), Gaps = 56/253 (22%)
Query: 221 LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLD 280
+ T GH A I + + L S+S D + +W+ V + S + +
Sbjct: 45 MRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104
Query: 281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG---------------------IDM 319
++ GG D ++ ++ V D
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 320 TRRVN--------------------------DQQFITCGEDGTLSLWSILKKVPTHTIPV 353
T + + F++ D + LW + + + T
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT- 223
Query: 354 AHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINS 413
H + I ++ N + A+GS D +L+ + + L + I S
Sbjct: 224 GH--------ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275
Query: 414 LVFTSDHKHLVAG 426
+ F+ + L+AG
Sbjct: 276 VSFSKSGRLLLAG 288
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 82.2 bits (201), Expect = 5e-18
Identities = 48/287 (16%), Positives = 104/287 (36%), Gaps = 44/287 (15%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKV----------------------- 177
+ C+ D + + S +D I W T
Sbjct: 14 TSKGVYCLQ--YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITG 71
Query: 178 ---------CSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWS----SSLEHL 224
+ + + L + NN ++ + + +I +W + +
Sbjct: 72 SSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLR 131
Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK 284
GH+A + + F+ + S+S DR+IKVWN +V TL GH+ I L +
Sbjct: 132 RVLVGHRAAVNV--VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--R 187
Query: 285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILK 344
+R++ SG +D ++R+W I+ + L + R ++++ ++ DG + +W ++
Sbjct: 188 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247
Query: 345 KVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
+ + + + + + S S+D + +W
Sbjct: 248 ALDPRAPAGTLCLRTLVEHSGRVFRLQ--FDEFQIVSSSHDDTILIW 292
Score = 54.9 bits (130), Expect = 6e-09
Identities = 33/221 (14%), Positives = 65/221 (29%), Gaps = 54/221 (24%)
Query: 220 SLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSL 279
SL+ +H + + + ++ + S D +IK+W+ L GH ++ L
Sbjct: 4 SLQRIHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61
Query: 280 DILAKNRVISSGG--------------------------------------TDKSVRVWK 301
+ + S D+S+ VW
Sbjct: 62 QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 302 IQEESQLVFN---GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD 358
+ + + R +D+ ++ D T+ +W+ T+
Sbjct: 122 MASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL------- 174
Query: 359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
+ + LV SGS D ++LW I L
Sbjct: 175 ----NGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 211
Score = 52.2 bits (123), Expect = 4e-08
Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 20/117 (17%)
Query: 153 DSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNS 212
+ V S D I W +E + + + + +N+ + SG +
Sbjct: 187 RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIR--------FDNKRIVSGAYDG 238
Query: 213 NIKLWS----------SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWN 259
IK+W + L T H + + F+ + SSS+D +I +W+
Sbjct: 239 KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILIWD 293
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 82.2 bits (201), Expect = 1e-17
Identities = 47/281 (16%), Positives = 98/281 (34%), Gaps = 29/281 (10%)
Query: 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI 193
+ I + + D K + + +D +I W +E R V + D S
Sbjct: 113 NTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYF 172
Query: 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR 253
+ ++LV+ + + + + T + T + + + S DR
Sbjct: 173 -----PSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDR 227
Query: 254 SIKVWNIEDRAYVETLF-------GHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEES 306
+++VW+ E VE L GH+ ++ S+ + + SG D+SV++W +Q +
Sbjct: 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNAN 287
Query: 307 QLVFNGHSRGIDMTRRV--------------NDQQFITCGEDGTLSLWSILKKVPTHTIP 352
+ ND+ ++ +D + W P +
Sbjct: 288 NKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQ 347
Query: 353 VAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393
G+ +S + ++ A+GS D ++WK
Sbjct: 348 ---GHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 81.4 bits (199), Expect = 2e-17
Identities = 52/314 (16%), Positives = 115/314 (36%), Gaps = 28/314 (8%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETR-----------SKVCSSPFVKTDRKS 189
H + + C+ ++D +++ + C + + + +K + + S
Sbjct: 61 HTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSS 120
Query: 190 YPPILALAVANNNELVASG-DNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYS 248
I ++ + + + +A+G ++ + + + GH+ I L D L S
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180
Query: 249 SSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ----- 303
S DR++++W++ TL T + I++G D++VRVW +
Sbjct: 181 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 240
Query: 304 ---EESQLVFNGHSRGI-DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD- 358
+ GH + + + Q ++ D ++ LW++ +
Sbjct: 241 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 300
Query: 359 --SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI---TPKRTLEFLQDIPLS-GVIN 412
+ +++ SVA N + + SGS D V W P L+ ++ +S V N
Sbjct: 301 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVAN 360
Query: 413 SLVFTSDHKHLVAG 426
++ G
Sbjct: 361 GSSLGPEYNVFATG 374
Score = 77.9 bits (190), Expect = 3e-16
Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 20/192 (10%)
Query: 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYP- 191
T D K++ + D + W ET V +
Sbjct: 196 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKD 255
Query: 192 PILALAVANNNELVASGDNNSNIKLWS-------------SSLEHLHTFTGHKAPITGLA 238
+ ++ + + V SG + ++KLW+ +S T+ GHK + +A
Sbjct: 256 SVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVA 315
Query: 239 ISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDIL------AKNRVISSGG 292
+ + + S S DR + W+ + + L GH++++ S+ + + V ++G
Sbjct: 316 TTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 375
Query: 293 TDKSVRVWKIQE 304
D R+WK ++
Sbjct: 376 GDCKARIWKYKK 387
Score = 60.6 bits (145), Expect = 1e-10
Identities = 45/260 (17%), Positives = 83/260 (31%), Gaps = 22/260 (8%)
Query: 188 KSYPPILALAVANNNELVASGDNNSNIKLWSSSLE-----HLHTFTGHKAPITGLAISFE 242
K PP L + + N L++ +L LH H + + + S +
Sbjct: 14 KPIPPFLLDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSND 73
Query: 243 CDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRV--- 299
+ L + +++ +V+ + D + V L +A + L + SS +SV
Sbjct: 74 GEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 132
Query: 300 --------WKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
+ N I + L S + V +
Sbjct: 133 GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDL 192
Query: 352 PVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL---- 407
+ S E T + +A+GS D V++W +E L
Sbjct: 193 RTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTG 252
Query: 408 -SGVINSLVFTSDHKHLVAG 426
+ S+VFT D + +V+G
Sbjct: 253 HKDSVYSVVFTRDGQSVVSG 272
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 79.5 bits (194), Expect = 6e-17
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 16/195 (8%)
Query: 205 VASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR 263
V SG + +K+W + LHT GH + + F+ + S S D SI+VW++E
Sbjct: 150 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYS--LQFDGIHVVSGSLDTSIRVWDVETG 207
Query: 264 AYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN---GHSRGIDMT 320
+ TL GHQS + +++ K+ ++ SG D +V++W I+ L +
Sbjct: 208 NCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC 265
Query: 321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380
+ N IT +DGT+ LW + + S + + + + A
Sbjct: 266 LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE----SGGSGGVVWRIRASNTKLVCA 321
Query: 381 SGSYDGC----VKLW 391
GS +G + +
Sbjct: 322 VGSRNGTEETKLLVL 336
Score = 73.7 bits (179), Expect = 6e-15
Identities = 57/323 (17%), Positives = 107/323 (33%), Gaps = 51/323 (15%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLET----------RSKVCSSPF-------- 182
H + + + S D + W T V SS
Sbjct: 15 HDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISG 73
Query: 183 ----------------VKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHT 226
+ T + + + + S D + + + LH
Sbjct: 74 STDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETG-QCLHV 132
Query: 227 FTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNR 286
GH A + + ++ + S + D +KVW+ E + TL GH + + SL
Sbjct: 133 LMGHVAAVRC--VQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI 188
Query: 287 VISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV 346
+ SG D S+RVW ++ + + + + + D ++ D T+ +W I
Sbjct: 189 HVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQ 248
Query: 347 PTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI---TPKRTLEFLQ 403
T+ + + S+ + + N + V + S DG VKLW + R L L+
Sbjct: 249 CLQTLQGPNKHQSAVTCLQF--------NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLE 300
Query: 404 DIPLSGVINSLVFTSDHKHLVAG 426
GV+ + ++ G
Sbjct: 301 SGGSGGVVWRIRASNTKLVCAVG 323
Score = 62.9 bits (151), Expect = 2e-11
Identities = 35/243 (14%), Positives = 75/243 (30%), Gaps = 53/243 (21%)
Query: 217 WS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSA 275
W L+ GH + + F + + S S+D ++KVW+ + TL GH
Sbjct: 1 WRRGELKSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 59
Query: 276 ITSLDI--------------------------------------LAKNRVISSGGTDKSV 297
+ S + + + SG D ++
Sbjct: 60 VWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATL 119
Query: 298 RVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY 357
RVW I+ L + + ++ ++ D + +W + HT+
Sbjct: 120 RVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL------ 173
Query: 358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT 417
+ + + + V SGS D +++W + + L + + +
Sbjct: 174 -----QGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH--QSLTSGMELK 226
Query: 418 SDH 420
+
Sbjct: 227 DNI 229
Score = 61.4 bits (147), Expect = 6e-11
Identities = 48/292 (16%), Positives = 102/292 (34%), Gaps = 54/292 (18%)
Query: 197 AVANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAIS--------------- 240
+ + SG +++ +K+WS + + L T GH + +
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 81
Query: 241 -----------------------FECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAIT 277
+ S S D +++VW+IE + L GH +A+
Sbjct: 82 WNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 141
Query: 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQL-VFNGHSRGIDMTRRVNDQQFITCGEDGT 336
+ + V + D V+VW + E+ L GH+ + + + ++ D +
Sbjct: 142 CVQYDGRRVVSGAY--DFMVKVWDPETETCLHTLQGHTN-RVYSLQFDGIHVVSGSLDTS 198
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPK 396
+ +W + HT+ S +++ SG+ D VK+W I
Sbjct: 199 IRVWDVETGNCIHTLTGHQSLTSGME-----------LKDNILVSGNADSTVKIWDIKTG 247
Query: 397 RTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAI 448
+ L+ LQ + + + + + + + KT + ++N V +
Sbjct: 248 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTL 299
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 78.7 bits (192), Expect = 1e-16
Identities = 45/281 (16%), Positives = 90/281 (32%), Gaps = 22/281 (7%)
Query: 192 PILALAVANNNELVASGDNNSNIKLW---SSSLEHLHTFTGHKAPITGLAISFECDTLYS 248
PI A + +A NN + ++ + +H H +TG+ + + + + +
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVT 68
Query: 249 SSNDRSIKVWNIEDRAYVETLFGH--QSAITSLDILAKNRVISSGGTDKSVRVWKIQEES 306
DR+ VW ++ R + TL A + + + G + + + ++E+
Sbjct: 69 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEN 128
Query: 307 QLVFNGHSRGI------DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG---- 356
H + + N D ++S K
Sbjct: 129 DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKM 188
Query: 357 -----YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI 411
SSS W+ V N VA S+D V L K + L L +
Sbjct: 189 PFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLP--L 246
Query: 412 NSLVFTSDHKHLVAGIGTEHRFGRWKTIKGVKNTVAIIDIQ 452
++ F ++ + AG + + G + +D+
Sbjct: 247 LAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVP 287
Score = 74.1 bits (180), Expect = 5e-15
Identities = 31/176 (17%), Positives = 60/176 (34%), Gaps = 5/176 (2%)
Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY--VETLFGHQSAITSLDIL 282
H+F PI+ A + + + N+ + ++ + V L H +T +D
Sbjct: 3 HSF--LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA 60
Query: 283 AKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSI 342
+ I + GTD++ VW ++ + R R V G+ S
Sbjct: 61 PDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS 120
Query: 343 LKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRT 398
+ + + S+ NS L+A+GS D +++ K
Sbjct: 121 ICYFEQEN-DWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEV 175
Score = 64.5 bits (155), Expect = 6e-12
Identities = 37/330 (11%), Positives = 89/330 (26%), Gaps = 30/330 (9%)
Query: 144 SITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNE 203
I+C A D + + + + V + + + + A ++
Sbjct: 9 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNG----QVTGVDWAPDSN 64
Query: 204 LVASGDNNSNIKLWSSSL---EHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
+ + + N +W+ + + + S R I +
Sbjct: 65 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYF 124
Query: 261 ----EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG 316
+ +S + SLD + ++++G D R++ + +
Sbjct: 125 EQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPW 184
Query: 317 IDMTRRVNDQQFITCGEDGTLSL-----------WSILKKVPTHTIPVAHGYDSSSSEPN 365
+ + S V + +SE
Sbjct: 185 GSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETL 244
Query: 366 WITSVACLHNSDLVASGSYDGCVKLW-------KITPKRTLEFLQDIPLSGVINSLVFTS 418
+ +V + S LVA+G D L+ K++ L+ + G+ F +
Sbjct: 245 PLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQN 303
Query: 419 DHKHLVAGIGTEHRFGRWKTIKGVKNTVAI 448
K + G K + +++
Sbjct: 304 LDKKASSEGSAAAGAGLDSLHKNSVSQISV 333
Score = 59.5 bits (142), Expect = 2e-10
Identities = 35/341 (10%), Positives = 93/341 (27%), Gaps = 59/341 (17%)
Query: 120 VNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCS 179
V+I ++ N V + H +T + DS + + D W L+ R+ +
Sbjct: 31 VHIYEKSGNKWVQVHELKE--HNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT 88
Query: 180 SPFVKTDRKSYPPILALAVANNNELVASGDNN-SNIKLWSSSLEHLHTFTGHKAPITGLA 238
++ +R + A S + + + H ++ + L
Sbjct: 89 LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 148
Query: 239 ISFECDTLYSSSNDRSIKVWNIEDRA------------------YVETLFGHQSAITSLD 280
L + S D ++++ + + + +
Sbjct: 149 WHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVC 208
Query: 281 ILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRG-IDMTRRVNDQQFITCGEDGTLSL 339
A ++ D +V + ++ + + + + + G D L
Sbjct: 209 FSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVL 268
Query: 340 WS------ILKKVPTHTIPVAHGYDSSSSE--------------------------PNWI 367
++ L +P ++ N +
Sbjct: 269 FTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSV 328
Query: 368 TSVACLHNSD----LVASGSYDGCVKLWKI-TPKRTLEFLQ 403
+ ++ L + DG + +W + + + L+ L+
Sbjct: 329 SQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLESALKDLK 369
Score = 44.8 bits (104), Expect = 1e-05
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 356 GYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLV 415
Y S EP I+ A + +A + V +++ + + ++ + +G + +
Sbjct: 1 AYHSFLVEP--ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVD 58
Query: 416 FTSDHKHLVAG 426
+ D +V
Sbjct: 59 WAPDSNRIVTC 69
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 67.9 bits (164), Expect = 4e-13
Identities = 48/289 (16%), Positives = 100/289 (34%), Gaps = 17/289 (5%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
H + + +++ ++HVY+ K + + + +K S +R +Y I + +
Sbjct: 50 HGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNY--IRSCKLLP 107
Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITG---LAISFECDTLYSSSNDRSIKV 257
+ + G S + +W + + LAIS + +S +D +I V
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGI 317
W++ ++ V GH + +DI + +GG D +VR W ++E QL + + I
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 318 DMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD 377
+ G + + + S+ +
Sbjct: 228 FS---------LGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGK 278
Query: 378 LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
S D + W+ + S + S + D K++V G
Sbjct: 279 WFVSTGKDNLLNAWRT---PYGASIFQSKESSSVLSCDISVDDKYIVTG 324
Score = 62.9 bits (151), Expect = 2e-11
Identities = 29/261 (11%), Positives = 80/261 (30%), Gaps = 15/261 (5%)
Query: 134 TKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPI 193
++ + I + D + + + W + + +
Sbjct: 89 SQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW---DLAAPTPRIKAELTSSAPACY 145
Query: 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR 253
++ + + + + + F GH + + IS + L++ D
Sbjct: 146 ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDN 205
Query: 254 SIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH 313
+++ W++ + S I SL ++ G +V V + + + + H
Sbjct: 206 TVRSWDLREG-RQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH 264
Query: 314 SRGIDMTRRVND-QQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372
+ + + F++ G+D L+ W E + + S
Sbjct: 265 ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----------ESSSVLSCDI 314
Query: 373 LHNSDLVASGSYDGCVKLWKI 393
+ + +GS D ++++
Sbjct: 315 SVDDKYIVTGSGDKKATVYEV 335
Score = 56.4 bits (134), Expect = 2e-09
Identities = 19/138 (13%), Positives = 46/138 (33%), Gaps = 2/138 (1%)
Query: 207 SGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYV 266
+G ++ ++ W + I L + + S ++
Sbjct: 200 TGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDK 258
Query: 267 ETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGI-DMTRRVND 325
L H+S + SL + S G D + W+ + + + S + V+D
Sbjct: 259 YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDD 318
Query: 326 QQFITCGEDGTLSLWSIL 343
+ +T D +++ ++
Sbjct: 319 KYIVTGSGDKKATVYEVI 336
Score = 42.1 bits (97), Expect = 8e-05
Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 9/114 (7%)
Query: 227 FTG--HKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK 284
F G P ++ + ++ I A H + ++ I
Sbjct: 3 FQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNP 62
Query: 285 NRVISSGGTDKSVRVWKIQEE------SQLVFNGHSRGIDMTRRVNDQQFITCG 332
R + +GG V+VW I SQL I + + D + G
Sbjct: 63 TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG 115
Score = 39.4 bits (90), Expect = 6e-04
Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 5/115 (4%)
Query: 278 SLDILAKNRVISSGGTDKSVRVWKIQEESQLVFN-GHSRGIDMTRRVNDQQFITCGEDGT 336
S + A ++ ++ I ++ + H + N + + G G
Sbjct: 14 SFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGGKGC 73
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
+ +W I + + N+I S L + + G + +W
Sbjct: 74 VKVWDISHPGNKSPVSQLDCLNRD----NYIRSCKLLPDGCTLIVGGEASTLSIW 124
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 67.6 bits (163), Expect = 6e-13
Identities = 45/348 (12%), Positives = 96/348 (27%), Gaps = 63/348 (18%)
Query: 138 GKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALA 197
GK H A I ++ + S DG + W + + + +
Sbjct: 10 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 198 V-------ANNNELVASGDNNSNIKLWS-----------SSLEHLHTFTGHKAPITGLAI 239
V A LVA+ + ++ + L K L
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW 127
Query: 240 SFECD-----TLYSSSNDRSIKVWNI------------------EDRAYVETLFGHQSAI 276
D L ++ + +W E + VE+
Sbjct: 128 GASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 187
Query: 277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGI--------DMTRRVNDQQF 328
TS+DI ++ +I++G + +V++ ++ L + +
Sbjct: 188 TSVDI-SERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 246
Query: 329 ITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEP-------NWITSVACLHNSDLVAS 381
+ + ++ + I SS +W+ S++ + + + S
Sbjct: 247 AIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS 306
Query: 382 GSYDGCVKLWKI---TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
+DG ++ W + TL D + + L L
Sbjct: 307 AGWDGKLRFWDVKTKERITTLNMHCD-DIEIEEDILAVDEHGDSLAEP 353
Score = 65.6 bits (158), Expect = 3e-12
Identities = 29/206 (14%), Positives = 64/206 (31%), Gaps = 42/206 (20%)
Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR------AYVETLFGHQSAITS 278
+ H A I ++ S S D +KVW+ + + F H+S +
Sbjct: 8 NAGKAHDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHH 65
Query: 279 LDILA-------KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTR---------- 321
+D+L + ++++ + ++I E + + +
Sbjct: 66 VDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWAL 125
Query: 322 -------RVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGY---------DSSSSEPN 365
R+ + + GT +W + +S +
Sbjct: 126 KWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQ 185
Query: 366 WITSVACLHNSDLVASGSYDGCVKLW 391
+ TSV L+A+G +G V++
Sbjct: 186 FATSVDISERG-LIATGFNNGTVQIS 210
Score = 51.8 bits (122), Expect = 8e-08
Identities = 26/218 (11%), Positives = 70/218 (32%), Gaps = 29/218 (13%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
T + ++ + + +G + L T + + + + I ++ +
Sbjct: 183 PSQFATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSP 241
Query: 201 NNELVASGDNNSNIKLW-----------------SSSLEHLHTFTGHKAPITGLAISFEC 243
L+A ++++ + S + H + + L+ +
Sbjct: 242 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG 301
Query: 244 DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSL-DILAKNRVISSGGTDKSVRVWKI 302
+TL S+ D ++ W+++ + + TL H I DILA + S V +
Sbjct: 302 ETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361
Query: 303 QEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLW 340
++ + ++ D ++ +
Sbjct: 362 KKGWRSGMGADL----------NESLCCVCLDRSIRWF 389
Score = 47.2 bits (110), Expect = 2e-06
Identities = 21/152 (13%), Positives = 43/152 (28%), Gaps = 23/152 (15%)
Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ-------EESQLVFNGHSRGID 318
H + I S+ N S D ++VW + ++ H G+
Sbjct: 7 ANAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH 64
Query: 319 MTRRV--------NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD-SSSSEPNWITS 369
+ T G L + I ++ T + S + + +
Sbjct: 65 HVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWA 124
Query: 370 VACLHNSD-----LVASGSYDGCVKLWKITPK 396
+ ++D + + G +WK P
Sbjct: 125 LKWGASNDRLLSHRLVATDVKGTTYIWKFHPF 156
Score = 45.2 bits (105), Expect = 1e-05
Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 5/110 (4%)
Query: 309 VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT 368
H I + + ++C DG L +W + ++ + S + +
Sbjct: 9 AGKAHDADI-FSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVD 67
Query: 369 SVACLHNSD----LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSL 414
+ + LVA+ S+ G + ++IT + + + L + + +
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDM 117
Score = 35.2 bits (79), Expect = 0.016
Identities = 18/109 (16%), Positives = 28/109 (25%), Gaps = 17/109 (15%)
Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDI 405
+ T AH I SV+ + S S DG +K+W +
Sbjct: 4 IATANAGKAH--------DADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDN-----EN 48
Query: 406 PLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI--KGVKNTVAIIDIQ 452
P + V S H+ E + + I
Sbjct: 49 PKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRIT 97
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 67.6 bits (163), Expect = 6e-13
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 4/154 (2%)
Query: 225 HTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAK 284
T GH + + FE + + + ++D+ I+V++ ++ ++ L GH + +L
Sbjct: 6 TTLRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG 64
Query: 285 NRVISSGGTDKSVRVWKIQEESQLVFNGHSRG---IDMTRRVNDQQFITCGEDGTLSLWS 341
++S + VF GH+ +D+ N + +T D TL +W
Sbjct: 65 GILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 124
Query: 342 ILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375
+ K+ H Y P +
Sbjct: 125 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 158
Score = 51.8 bits (122), Expect = 6e-08
Identities = 28/139 (20%), Positives = 58/139 (41%), Gaps = 4/139 (2%)
Query: 197 AVANNNELVASGDNNSNIKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
+ + V +G ++ I+++ + + L +GH + L + L S S DR++
Sbjct: 18 CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYA-HGGILVSGSTDRTV 76
Query: 256 KVWNIEDRAYVETLFGHQSA--ITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGH 313
+VW+I+ GH S + + I +G D ++ VWK+ +ES + +G
Sbjct: 77 RVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGE 136
Query: 314 SRGIDMTRRVNDQQFITCG 332
+ ++ G
Sbjct: 137 EHDYPLVFHTPEENPYFVG 155
Score = 50.3 bits (118), Expect = 2e-07
Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 11/175 (6%)
Query: 217 WSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAI 276
+ ++ L+ +GH I E S+S D +I++W++E+ + TL GH + +
Sbjct: 187 DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV 246
Query: 277 TSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGT 336
L + K V ++ + + I + G +
Sbjct: 247 GLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFY--VSDNILVSGSENQ 304
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLW 391
+++++ H + + I SV LVA+ DG L
Sbjct: 305 FNIYNLRSGKLVHANILKDA--------DQIWSVN-FKGKTLVAAVEKDGQSFLE 350
Score = 40.3 bits (92), Expect = 4e-04
Identities = 34/304 (11%), Positives = 79/304 (25%), Gaps = 43/304 (14%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
H + + V + + + + + T R
Sbjct: 52 HDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVE-----YK 106
Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSN--------- 251
N + + +G ++ + +W E G + + + E + +
Sbjct: 107 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 166
Query: 252 -------------DRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVR 298
D ++ VW++ + L GH I S + + S D ++R
Sbjct: 167 VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIR 226
Query: 299 VWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYD 358
+W G M + L S
Sbjct: 227 IWD-----------LENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSR 275
Query: 359 SSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPL--SGVINSLVF 416
S ++++ + SD + + ++ + R+ + + L + I S+ F
Sbjct: 276 KFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNL---RSGKLVHANILKDADQIWSVNF 332
Query: 417 TSDH 420
Sbjct: 333 KGKT 336
Score = 39.9 bits (91), Expect = 5e-04
Identities = 8/87 (9%), Positives = 25/87 (28%), Gaps = 2/87 (2%)
Query: 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ--EESQLVFNGHSR 315
+ Y H + ++++ + I G++ ++ ++ + +
Sbjct: 266 RGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDAD 325
Query: 316 GIDMTRRVNDQQFITCGEDGTLSLWSI 342
I +DG L +
Sbjct: 326 QIWSVNFKGKTLVAAVEKDGQSFLEIL 352
Score = 38.7 bits (88), Expect = 0.001
Identities = 11/89 (12%), Positives = 25/89 (28%), Gaps = 9/89 (10%)
Query: 307 QLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW 366
+ GH + + D IT +D + ++ + K + H
Sbjct: 5 RTTLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLS-GHD--------GG 55
Query: 367 ITSVACLHNSDLVASGSYDGCVKLWKITP 395
+ ++ H LV+ +
Sbjct: 56 VWALKYAHGGILVSGSTDRTVRVWDIKKG 84
Score = 38.0 bits (86), Expect = 0.002
Identities = 12/70 (17%), Positives = 25/70 (35%), Gaps = 3/70 (4%)
Query: 370 VACLH-NSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIG 428
+ CL + V +G+ D ++++ K+ L L G + +L + +
Sbjct: 16 ITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHGGILVSGSTD 73
Query: 429 TEHRFGRWKT 438
R K
Sbjct: 74 RTVRVWDIKK 83
Score = 36.4 bits (82), Expect = 0.005
Identities = 11/85 (12%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPP 192
H +++ I S ++ + + + L + V ++ D
Sbjct: 272 DYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDAD-----Q 326
Query: 193 ILALAVANNNELVASGDNNSNIKLW 217
I ++ LVA+ + + L
Sbjct: 327 IWSVNF-KGKTLVAAVEKDGQSFLE 350
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 65.3 bits (157), Expect = 3e-12
Identities = 31/336 (9%), Positives = 91/336 (27%), Gaps = 30/336 (8%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
+ + I+ I + + DG + + + ++K + + P+L
Sbjct: 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD---LLQSLRYKHPLLCCNF 64
Query: 199 ANNNELV---ASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSI 255
+N +L + S + D L ++S D I
Sbjct: 65 IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLI 124
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGT------DKSVRVWKIQEESQLV 309
+V + + + ++ + + ++ + V+ +++
Sbjct: 125 EVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDN 184
Query: 310 FNGHSRGIDMTRRV------NDQQFITCGEDGTLSLWS------ILKKVPTHTIPVAHGY 357
G+ R + + DG +++
Sbjct: 185 GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLN 244
Query: 358 DSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFT 417
++ + S+ + + DG + W + ++ +++ + +
Sbjct: 245 LKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK---IKNFAKFNEDSVVKIA 301
Query: 418 SDHKHLVAGIG--TEHRFGRW-KTIKGVKNTVAIID 450
L T +TI+ +++ II
Sbjct: 302 CSDNILCLATSDDTFKTNAAIDQTIELNASSIYIIF 337
Score = 54.9 bits (130), Expect = 8e-09
Identities = 20/177 (11%), Positives = 53/177 (29%), Gaps = 4/177 (2%)
Query: 221 LEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL---FGHQSAIT 277
++ + K I+ + I L +S D S+ V+ + +A L ++ +
Sbjct: 1 MQIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL 60
Query: 278 SLDILA-KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGT 336
+ + + I G + + ++ R+
Sbjct: 61 CCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASW 120
Query: 337 LSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393
L ++ +A +S++ NS + G + V+ +++
Sbjct: 121 DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRL 177
Score = 52.5 bits (124), Expect = 4e-08
Identities = 18/190 (9%), Positives = 55/190 (28%), Gaps = 15/190 (7%)
Query: 131 VVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSY 190
+ N + + ++S + + + + L + +
Sbjct: 137 IAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQI 196
Query: 191 PPILALAVANNNELVASGDNNSNIKLWSSSLE--------------HLHTFTGHKAPITG 236
+ L +S D ++ + + T P+
Sbjct: 197 RDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNS 256
Query: 237 LAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKS 296
+ S LY++ +D I WN++ R ++ + + I + ++ +D +
Sbjct: 257 IEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNE-DSVVKIACSDNILCLATSDDT 315
Query: 297 VRVWKIQEES 306
+ +++
Sbjct: 316 FKTNAAIDQT 325
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 60.7 bits (145), Expect = 8e-11
Identities = 27/260 (10%), Positives = 74/260 (28%), Gaps = 17/260 (6%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
H T + + S G + W + + +
Sbjct: 57 HSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKR 116
Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
+ + ++ L+ + + + +A + + S S+D ++ ++
Sbjct: 117 IAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 176
Query: 261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQL---------VFN 311
+ T H + S+ + +S G D ++ ++ + ++
Sbjct: 177 PPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVA 236
Query: 312 GHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVA 371
+T + + + D T+ +W++ TIPV +
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI--------EDQQLG 288
Query: 372 CLHNSDLVASGSYDGCVKLW 391
+ + S S +G +
Sbjct: 289 IIWTKQALVSISANGFINFV 308
Score = 49.5 bits (116), Expect = 3e-07
Identities = 10/68 (14%), Positives = 21/68 (30%)
Query: 194 LALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDR 253
+ L + + + S + SL +T H T S S
Sbjct: 21 VVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHG 80
Query: 254 SIKVWNIE 261
++++W+
Sbjct: 81 NVRIWDTT 88
Score = 49.5 bits (116), Expect = 3e-07
Identities = 37/293 (12%), Positives = 87/293 (29%), Gaps = 18/293 (6%)
Query: 142 RASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN 201
R + + T + + + + + + T+ + +
Sbjct: 17 RGTAVVLGNTPAGDKIQYCNGTSVYT-VPVGSLTDT----EIYTEHSH--QTTVAKTSPS 69
Query: 202 NELVASGDNNSNIKLWSSSLEHL---HTFTGHKAPITGLAISFECDTLYSSSNDRSI--- 255
ASGD + N+++W ++ T P+ ++ E + + R
Sbjct: 70 GYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 129
Query: 256 KVWNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSR 315
+ ++ + ++ I SG D +V +++ G
Sbjct: 130 VFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHT 189
Query: 316 GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHN 375
+ R N + G ++ T T + + + + +
Sbjct: 190 KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD 249
Query: 376 SDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLV--FTSDHKHLVAG 426
+AS S D +K+W + TL+ + IP+ I + LV+
Sbjct: 250 GTKIASASADKTIKIWNV---ATLKVEKTIPVGTRIEDQQLGIIWTKQALVSI 299
Score = 49.1 bits (115), Expect = 4e-07
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 201 NNELVASGDNNSNIKLWS-SSLEHLHTFTGH-KAPITGLAISFECDTLYSSSNDRSIKVW 258
+ +AS + IK+W+ ++L+ T + L I + L S S + I
Sbjct: 249 DGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Query: 259 NIE 261
N E
Sbjct: 309 NPE 311
Score = 46.4 bits (108), Expect = 3e-06
Identities = 14/88 (15%), Positives = 20/88 (22%), Gaps = 3/88 (3%)
Query: 219 SSLEHLHTFTGHKAPITGLAISFECD---TLYSSSNDRSIKVWNIEDRAYVETLFGHQSA 275
S F G A+ N S+ + E H
Sbjct: 1 SEFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQ 60
Query: 276 ITSLDILAKNRVISSGGTDKSVRVWKIQ 303
T +SG +VR+W
Sbjct: 61 TTVAKTSPSGYYCASGDVHGNVRIWDTT 88
Score = 38.3 bits (87), Expect = 0.001
Identities = 16/97 (16%), Positives = 26/97 (26%), Gaps = 5/97 (5%)
Query: 121 NIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSS 180
N D H S+ + + D + SA D I W + T +
Sbjct: 217 NGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 276
Query: 181 PFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLW 217
P + L + + + S N I
Sbjct: 277 PV-----GTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 30.3 bits (66), Expect = 0.42
Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 9/112 (8%)
Query: 325 DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSY 384
I ++ + T H + T + ASG
Sbjct: 28 AGDKIQYCNGTSVYTVPVGSLTDTEIY-TEH--------SHQTTVAKTSPSGYYCASGDV 78
Query: 385 DGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRW 436
G V++W T + SG + + + S+ K + A RFG
Sbjct: 79 HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHV 130
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 59.8 bits (143), Expect = 2e-10
Identities = 34/310 (10%), Positives = 79/310 (25%), Gaps = 53/310 (17%)
Query: 140 PHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
P + + D++ Y G I L+T + + + + A+
Sbjct: 37 PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96
Query: 199 ANNNELVASGDNNSNIKLWSSSLEH-----LHTFTGHKAPITGLAISFECDTLYSSSNDR 253
+ + + V + N + ++ T G +A L +++D
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156
Query: 254 SI-------KVWNIEDRAYVETLFGH-------------------------QSAITSLDI 281
S+ +++ Y L T
Sbjct: 157 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 216
Query: 282 LAKNRVISSGGTDKSVRVWKIQ--EESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSL 339
+ ++ ++ + F + R G L+
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAK 276
Query: 340 WSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTL 399
+ + ++ + H VA D + G + ++ TL
Sbjct: 277 YDLKQRKLIKAANLDH----------TYYCVAFDKKGDKLYLGGTFNDLAVFNP---DTL 323
Query: 400 EFLQDIPLSG 409
E +++I L G
Sbjct: 324 EKVKNIKLPG 333
Score = 48.6 bits (114), Expect = 8e-07
Identities = 18/157 (11%), Positives = 38/157 (24%), Gaps = 8/157 (5%)
Query: 130 TVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKS 189
+ T D + +A + L+T +
Sbjct: 196 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH-----TQEFADL 250
Query: 190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSS 249
+ + G N K + + +A + D LY
Sbjct: 251 TELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLG 309
Query: 250 SNDRSIKVWNIEDRAYVET--LFGHQSAITSLDILAK 284
+ V+N + V+ L G + T+ + +
Sbjct: 310 GTFNDLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFIR 346
Score = 38.2 bits (87), Expect = 0.002
Identities = 21/222 (9%), Positives = 59/222 (26%), Gaps = 18/222 (8%)
Query: 236 GLAISFECDTLYSSSNDRSIKVWNIEDRAYVETL-FGHQSAITSLDILAKNR-VISSGGT 293
G A+ + + ++ ++ V ++ ++ + + + NR
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH 60
Query: 294 DKSVRVWKIQE-ESQLVFNGHSRGIDMTRRVNDQQFITCGE-----DGTLSLWSILKKVP 347
+ + ++ N S ++ R + G+ + V
Sbjct: 61 YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 120
Query: 348 THTIPVAHGYDSSSSEP-------NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLE 400
+ V D ++P + + + L +G + + L
Sbjct: 121 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALP 180
Query: 401 F---LQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKTI 439
+ + + +H + + T RF K
Sbjct: 181 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQD 222
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 57.6 bits (137), Expect = 9e-10
Identities = 36/302 (11%), Positives = 86/302 (28%), Gaps = 19/302 (6%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
R T ++ + + C ++ L + SKV S + +
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 201 NNELVASGDNNSNIKLWSSS---------LEHLHTFTGHKAPITGLAISFECDTL--YSS 249
++ + SGD + + +W + + F PI+ ++ FE L
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGE 135
Query: 250 SNDRSIKVWNIEDRAYVETLFGHQSAITSLDILAKNRV-ISSGGTDKSVRVWKIQEESQL 308
D + + + + GH I + + + + G D SV ++
Sbjct: 136 GRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS 195
Query: 309 VFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWIT 368
+ R + + T+ + + +
Sbjct: 196 ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGI 255
Query: 369 SVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSG----VINSLVFTSDHKHLV 424
+S A+ D +++W + T + +Q L V + + ++
Sbjct: 256 FALSWLDSQKFATVGADATIRVWDV---TTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 312
Query: 425 AG 426
+
Sbjct: 313 SL 314
Score = 56.8 bits (135), Expect = 1e-09
Identities = 28/271 (10%), Positives = 73/271 (26%), Gaps = 25/271 (9%)
Query: 141 HRASITCIAV--TSDSKHVYSACKDGIIIKWLLETRSKVCSSPFV--KTDRKSYPPILAL 196
+ +T + S+++ S + G +I W + S + PI +
Sbjct: 62 GSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDI 121
Query: 197 AVANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECD-------TLYSS 249
+ + + S + ++ + T+
Sbjct: 122 SWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDD 181
Query: 250 SNDRSIKVWNIEDRAYVETLFGHQSAITSLDI------LAKNRVISSGGTDKSVRVWKIQ 303
+ + + A T S + ++ + + +
Sbjct: 182 GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 241
Query: 304 EESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363
+ + GI ++ Q+F T G D T+ +W + + +
Sbjct: 242 KYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTL-------DKQ 294
Query: 364 PNWITSVACLHNSD-LVASGSYDGCVKLWKI 393
V + + + S S DG + +++
Sbjct: 295 QLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 56.5 bits (134), Expect = 1e-09
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 133 CTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPP 192
+ P RA + I+++ ++ + G I+ + L++R S +T + +
Sbjct: 153 VSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAIS 212
Query: 193 I-----LALAVANNNELVASGDNNSNIKLWS--SSLEHLHTFTGHKAPITGLAISFECDT 245
A +LVA+G ++NI ++S ++ + HK + L T
Sbjct: 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-ST 271
Query: 246 LYSSSNDRSIKVWNI 260
L SS D IK WN+
Sbjct: 272 LVSSGADACIKRWNV 286
Score = 50.7 bits (119), Expect = 1e-07
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 9/58 (15%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDI 281
L T +GH IT L ++ L S S D I W+ H + I SLD
Sbjct: 6 LKTISGHNKGITALTVN----PLISGSYDGRIMEWSSSS-----MHQDHSNLIVSLDN 54
Score = 50.3 bits (118), Expect = 2e-07
Identities = 8/88 (9%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
Query: 258 WNIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLV--FNGHSR 315
+ + + + + + + ++++G D ++ ++ ++ +++ N H
Sbjct: 200 RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKD 259
Query: 316 GIDMTRRVNDQQFITCGEDGTLSLWSIL 343
G++ ++ G D + W+++
Sbjct: 260 GVNNLLWETPSTLVSSGADACIKRWNVV 287
Score = 46.9 bits (109), Expect = 2e-06
Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 9/70 (12%)
Query: 324 NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383
+ T D + ++S+ + + AH + + ++ + S
Sbjct: 226 EEDLVATGSLDTNIFIYSVKRPMKIIKALNAH--------KDGVNNLLW-ETPSTLVSSG 276
Query: 384 YDGCVKLWKI 393
D C+K W +
Sbjct: 277 ADACIKRWNV 286
Score = 45.7 bits (106), Expect = 6e-06
Identities = 34/287 (11%), Positives = 81/287 (28%), Gaps = 23/287 (8%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
H IT + V + S DG I++W + + S+ I++L +
Sbjct: 12 HNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHSNL-----------IVSLDNSK 56
Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
E + +++ + E A G D + +
Sbjct: 57 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKS 116
Query: 261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMT 320
+ A + + ++ + + I ++
Sbjct: 117 VRLNSPGSAVSLSQNYV-----AVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS 171
Query: 321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380
L + + ++ S +P + DLVA
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA 231
Query: 381 SGSYDGCVKLWKI-TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
+GS D + ++ + P + ++ L +N+L++ + + +G
Sbjct: 232 TGSLDTNIFIYSVKRPMKIIKALN--AHKDGVNNLLWETPSTLVSSG 276
Score = 33.8 bits (75), Expect = 0.032
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 13/84 (15%)
Query: 292 GTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTI 351
G D+ ++ GH++GI + I+ DG + WS H+
Sbjct: 1 GHDEVLKTIS----------GHNKGI---TALTVNPLISGSYDGRIMEWSSSSMHQDHSN 47
Query: 352 PVAHGYDSSSSEPNWITSVACLHN 375
+ +S + E + I+ L
Sbjct: 48 LIVSLDNSKAQEYSSISWDDTLKV 71
Score = 30.3 bits (66), Expect = 0.38
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 11/72 (15%)
Query: 365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV 424
IT++ + + SGSYDG + W + S +I SL + ++
Sbjct: 14 KGITALTV----NPLISGSYDGRIMEWSSSSMHQDH-------SNLIVSLDNSKAQEYSS 62
Query: 425 AGIGTEHRFGRW 436
+
Sbjct: 63 ISWDDTLKVNGI 74
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 56.0 bits (133), Expect = 3e-09
Identities = 40/334 (11%), Positives = 82/334 (24%), Gaps = 55/334 (16%)
Query: 126 LANATVVCTKFNGKPHRASITCIAVTSDSKHVY-SACKDGIIIKWLLETRSKVCSSPFVK 184
V + V + Y + K ++K L T + +
Sbjct: 18 TEKMAVDKV-ITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-ETLGRIDLS 75
Query: 185 TDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEH------------LHTFTGHKA 232
T + + A++ + + +A ++ ++L ++
Sbjct: 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR 135
Query: 233 PITGLAISFECDTLYSSSNDRSIKVWNIED---------------------RAYVETLFG 271
IT LA + + LY D + + +
Sbjct: 136 QITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195
Query: 272 HQSAITSLDILAKNRVISSGGTDKSVRVWKIQE-ESQLVFNGHSRGIDMTRRVNDQQFIT 330
A + ++ E + + VN +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 331 CGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKL 390
G L + + K +P+ H SV + V G G +
Sbjct: 256 FGAYNVLESFDLEKNASIKRVPLPH----------SYYSVNVSTDGSTVWLGGALGDLAA 305
Query: 391 WKITPKRTLEFLQDIPLSG-----VINSLVFTSD 419
+ TLE + L G + + +FT D
Sbjct: 306 YDA---ETLEKKGQVDLPGNASMSLASVRLFTRD 336
Score = 38.6 bits (88), Expect = 0.001
Identities = 7/101 (6%), Positives = 19/101 (18%), Gaps = 11/101 (10%)
Query: 328 FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSD-LVASGSYDG 386
+ L + K I + + A+ +
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITI-------ADAGPTPMVPMVAPGGRIAYATVNKSE 56
Query: 387 CVKLWKI---TPKRTLEFLQDIPLSGVINSLVFTSDHKHLV 424
+ + ++ + + D K L
Sbjct: 57 SLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLA 97
Score = 37.5 bits (85), Expect = 0.002
Identities = 19/208 (9%), Positives = 49/208 (23%), Gaps = 17/208 (8%)
Query: 244 DTLYSSSNDRSIKVWNIEDRAYVETLFGHQSAITSLDILA---KNRVISSGGTDKSVRVW 300
D + + + + V + E A + + + T + + ++ +S+
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 301 KIQEESQLVFNGHSRGIDMTRRVND-------QQFITCGEDGTLSLWSILKKVPTHTIPV 353
+ L S + + + + L L + +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 354 AHGYDSSSSEP--NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVI 411
A + IT +A + + D V ++D P+
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDP-----EAGTLVEDKPIQSWE 176
Query: 412 NSLVFTSDHKHLVAGIGTEHRFGRWKTI 439
D + +
Sbjct: 177 AETYAQPDVLAVWNQHESSGVMATPFYT 204
Score = 29.0 bits (63), Expect = 1.2
Identities = 4/68 (5%), Positives = 18/68 (26%), Gaps = 6/68 (8%)
Query: 377 DLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGV---INSLVFTSDHKHLVAGIGTEHRF 433
D + + + + + + + I ++ + + A +
Sbjct: 2 DYILAPARPDKLVVIDTE---KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESL 58
Query: 434 GRWKTIKG 441
+ + G
Sbjct: 59 VKIDLVTG 66
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 55.0 bits (130), Expect = 6e-09
Identities = 34/286 (11%), Positives = 81/286 (28%), Gaps = 10/286 (3%)
Query: 141 HRASITCIAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVAN 200
H +IT ++ ++D K ++SA +G I W + T P V I + +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHAT-----MITGIKTTS 65
Query: 201 NNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
+L ++ + + + + + +
Sbjct: 66 KGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIY 125
Query: 261 EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMT 320
E + S+ +L + + + V S++ H I
Sbjct: 126 SHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSV 185
Query: 321 RRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVA 380
N+ F+ + +S + + V+ ++ +A
Sbjct: 186 AFSNNGAFLVAT-----DQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLA 240
Query: 381 SGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAG 426
+GS D V +W + + + + V + +V+
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSA 286
Score = 54.6 bits (129), Expect = 8e-09
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 1/78 (1%)
Query: 224 LHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAYVETLF-GHQSAITSLDIL 282
GH IT L+ S + TL+S+ + I W+I H + IT +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 283 AKNRVISSGGTDKSVRVW 300
+K + + D V
Sbjct: 65 SKGDLFTVSWDDHLKVVP 82
Score = 48.8 bits (114), Expect = 6e-07
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 2/103 (1%)
Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQ--EESQLVFNGHSRGIDMTRRV 323
+ +GH AIT+L A + + S + + W I +++ + H+ I +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 324 NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNW 366
+ T D L + + VA+ S
Sbjct: 65 SKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 107
Score = 47.3 bits (110), Expect = 2e-06
Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 7/71 (9%)
Query: 324 NDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383
++ + T D ++ +W++ K I S + N + S
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMS-------SVNSVIWLNETTIVSAG 287
Query: 384 YDGCVKLWKIT 394
D +K W +
Sbjct: 288 QDSNIKFWNVP 298
Score = 45.4 bits (105), Expect = 7e-06
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 2/62 (3%)
Query: 243 CDTLYSSSNDRSIKVWNIEDRAYVETLF--GHQSAITSLDILAKNRVISSGGTDKSVRVW 300
L + S D S+ VWN+ + + H + + I I S G D +++ W
Sbjct: 236 NVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Query: 301 KI 302
+
Sbjct: 296 NV 297
Score = 43.4 bits (100), Expect = 3e-05
Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 290 SGGTDKSVRVWKIQEESQ---LVFNGHSRG-IDMTRRVNDQQFITCGEDGTLSLWSI 342
+G D SV VW + + S ++ H+ ++ +N+ ++ G+D + W++
Sbjct: 241 TGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 41.9 bits (96), Expect = 8e-05
Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 206 ASGDNNSNIKLW---SSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNI 260
A+G ++++ +W S + H I T+ S+ D +IK WN+
Sbjct: 240 ATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
Score = 40.7 bits (93), Expect = 2e-04
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 365 NWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLV 424
IT+++ + + S +G + W I+ + D+ + +I + TS
Sbjct: 13 KAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVH-ATMITGIKTTSKGDLFT 71
Query: 425 AGIGTEHRF 433
+
Sbjct: 72 VSWDDHLKV 80
Score = 31.5 bits (69), Expect = 0.18
Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 4/63 (6%)
Query: 156 HVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIK 215
+ + D +I W + S + + + N + S +SNIK
Sbjct: 238 RLATGSLDNSVIVWNMNKPSDHP----IIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIK 293
Query: 216 LWS 218
W+
Sbjct: 294 FWN 296
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 50.2 bits (118), Expect = 2e-07
Identities = 19/211 (9%), Positives = 47/211 (22%), Gaps = 31/211 (14%)
Query: 209 DNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY--- 265
I ++ + T + A + LY S + +
Sbjct: 156 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215
Query: 266 ----VETLFGHQSAITSLDILAKNRVISSG-----GTDKSVRVWKIQEESQLVFNGHSRG 316
+ + ++ ++ +G K + +
Sbjct: 216 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS 275
Query: 317 IDMTRRVND----QQFITCGEDGTLSLWSIL-KKVPTHTIPVAHGYDSSSSEPNWITSVA 371
I + + E G L + + +KV N +T +
Sbjct: 276 ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK--------------NNLTDLR 321
Query: 372 CLHNSDLVASGSYDGCVKLWKITPKRTLEFL 402
+ V DG + + + +
Sbjct: 322 LSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 49.9 bits (117), Expect = 3e-07
Identities = 9/168 (5%), Positives = 35/168 (20%), Gaps = 17/168 (10%)
Query: 201 NNELVASGDNNSNIKLWSSSL--------EHLHTFTGHKAPITGLAISFECDTLYSSSND 252
+++ + S + + T + D
Sbjct: 189 DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 248
Query: 253 RSIKVWNI-------EDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEE 305
+ D + L + + + ++
Sbjct: 249 LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTR 308
Query: 306 SQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPV 353
+ + ++ + + + +DG + + + K T+
Sbjct: 309 KVTEVKNNLTDLRLSA--DRKTVMVRKDDGKIYTFPLEKPEDERTVET 354
Score = 47.9 bits (112), Expect = 1e-06
Identities = 10/131 (7%), Positives = 29/131 (22%), Gaps = 6/131 (4%)
Query: 141 HRASITCIAVTSDSKHVYSA--CKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
S + S + + + + + +
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILI-YSVPVH 284
Query: 199 ANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
+ + + + +T L +S + T+ +D I +
Sbjct: 285 GEFAAYYQGAPEKGVLLKYDVKTRKVTEVKNN---LTDLRLSADRKTVMVRKDDGKIYTF 341
Query: 259 NIEDRAYVETL 269
+E T+
Sbjct: 342 PLEKPEDERTV 352
Score = 39.8 bits (91), Expect = 4e-04
Identities = 17/206 (8%), Positives = 47/206 (22%), Gaps = 13/206 (6%)
Query: 204 LVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDR 263
+ + ++ F + + + + +++ I ++E
Sbjct: 58 FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117
Query: 264 AYVETLFGHQSAITSLDIL----------AKNRVISSGGTDKSVRVWKIQEESQLVFNGH 313
++ IT I + G +++ V+ ++
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177
Query: 314 SRGIDMTRRVNDQQFI-TCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVAC 372
+ D + + V + V P
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDR--VVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 373 LHNSDLVASGSYDGCVKLWKITPKRT 398
+ S +G YD + +P
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINV 261
Score = 30.2 bits (66), Expect = 0.57
Identities = 9/37 (24%), Positives = 17/37 (45%)
Query: 139 KPHRASITCIAVTSDSKHVYSACKDGIIIKWLLETRS 175
+ ++T + +++D K V DG I + LE
Sbjct: 311 TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPE 347
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 45.6 bits (106), Expect = 8e-06
Identities = 26/317 (8%), Positives = 72/317 (22%), Gaps = 46/317 (14%)
Query: 113 EQEGKLRV-NIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKWLL 171
E+ + V + L A + ++T D K + ++
Sbjct: 75 ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 134
Query: 172 ETRS----KVCSSPFVKTDRKSYPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTF 227
+ ++ P + P + + + + ++ +
Sbjct: 135 DLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE----VFH 190
Query: 228 TGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRA--YVETLFGHQSAITSLDILAKN 285
+ I A S + L + I ++ ++ + A +
Sbjct: 191 PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGG 250
Query: 286 RVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKK 345
+ + + + + +
Sbjct: 251 WQQVAYHRALDRIYLLVDQRDEWRHKTA--------------------SRFVVVLDAKTG 290
Query: 346 VPTHTIPVAHGYDSSSSEPNWITSVACLH--NSDLVASGSYDGCVKLWKITPKRTLEFLQ 403
+ H I S+ L A + D + + + E L+
Sbjct: 291 ERLAKFEMGH----------EIDSINVSQDEKPLLYALSTGDKTLYIHDA---ESGEELR 337
Query: 404 DIPLSGVINSLVFTSDH 420
+ G ++ T+D
Sbjct: 338 SVNQLGHGPQVITTADM 354
Score = 44.4 bits (103), Expect = 2e-05
Identities = 16/191 (8%), Positives = 46/191 (24%), Gaps = 20/191 (10%)
Query: 110 VVLEQEGKLRVNIADRLANATVVCTKFNGKPHRASITCIAVTSDSKHVYSACKDGIIIKW 169
+ ++G L + T+ I A + + + G I +
Sbjct: 162 FMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQI 221
Query: 170 LLETRSKVCSSPFVKTDRK----------------SYPPILALAVANNNELVASGDNNSN 213
L + + + + +
Sbjct: 222 DLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRF 281
Query: 214 IKLWS-SSLEHLHTFTGHKAPITGLAISFECDTLY--SSSNDRSIKVWNIEDRAYVETLF 270
+ + + E L F + +S + L S+ D+++ + + E + ++
Sbjct: 282 VVVLDAKTGERLAKFEMGHEI-DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 340
Query: 271 GHQSAITSLDI 281
+
Sbjct: 341 QLGHGPQVITT 351
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 43.4 bits (101), Expect = 4e-05
Identities = 14/245 (5%), Positives = 48/245 (19%), Gaps = 34/245 (13%)
Query: 148 IAVTSDSKHVYSA-CKDGIIIKWLLETRSKVCSSPFVKTDRKS-YPPILALAVANNNELV 205
I + S + + S + + L
Sbjct: 129 IGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLA 188
Query: 206 ASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVWNIEDRAY 265
AS + + ++ +++ ++
Sbjct: 189 ASDLAAAPAAAGIVGAQ---CTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATM 245
Query: 266 VETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSR---------- 315
+ G++S + + + + + + + E S+
Sbjct: 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ 305
Query: 316 ------------GIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSE 363
I + + L ++ ++ + G
Sbjct: 306 TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG------- 358
Query: 364 PNWIT 368
P ++
Sbjct: 359 PESLS 363
Score = 33.0 bits (74), Expect = 0.066
Identities = 13/123 (10%), Positives = 29/123 (23%), Gaps = 14/123 (11%)
Query: 326 QQFITCGEDGTLSLWSILKKVPT--HTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGS 383
+ GT W A + + ++A + A G
Sbjct: 35 HITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFAR-SAKGK 93
Query: 384 YDGCVKLWKITPKRTLEFLQDIPL--------SGVINSLVFTSDHKHLVAGIGTEHRFGR 435
V+++ T + DI L ++ + + L+ +
Sbjct: 94 RTDYVEVFDPV---TFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAG 150
Query: 436 WKT 438
Sbjct: 151 LSV 153
Score = 33.0 bits (74), Expect = 0.071
Identities = 11/156 (7%), Positives = 28/156 (17%), Gaps = 26/156 (16%)
Query: 288 ISSGGTDKSVRVW-----------KIQEESQLVFNGHSRGIDMT---RRVNDQQFITCGE 333
+ G V V+ ++ + + I +
Sbjct: 89 SAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACL----LFFLFG 144
Query: 334 DGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKI 393
+ S+ A + + L AS +
Sbjct: 145 SSAAAGLSVPGASDDQLTKSASCFHIHPGAAATH--YLGSCPASLAASDLAAAPAAAGIV 202
Query: 394 TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGT 429
+ T + + + A +
Sbjct: 203 GAQCT------GAQNCSSQAAQANYPGMLVWAVASS 232
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 39.5 bits (90), Expect = 6e-04
Identities = 7/54 (12%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 217 WSSSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRSIKVWNIEDRAYVETL 269
+ + + P G+A++ + +Y + S ++ V + T+
Sbjct: 230 DTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
Score = 34.1 bits (76), Expect = 0.029
Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 9/64 (14%)
Query: 328 FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC 387
+I E +S+ + T TIPV + P+ + + + ++
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPD---------GTKVYVANAHSND 55
Query: 388 VKLW 391
V +
Sbjct: 56 VSII 59
Score = 33.7 bits (75), Expect = 0.035
Identities = 10/87 (11%), Positives = 24/87 (27%), Gaps = 6/87 (6%)
Query: 248 SSSNDRSIKVWNIEDRAYVETLFGH---QSAITSLDILAKNRVISSGGTDKSVRVWKIQE 304
++S +I V ++ T+ A+ S D +V + V +
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPD---GTKVYVANAHSNDVSIIDTAT 63
Query: 305 ESQLVFNGHSRGIDMTRRVNDQQFITC 331
+ + D + +
Sbjct: 64 NNVIATVPAGSSPQGVAVSPDGKQVYV 90
Score = 29.1 bits (63), Expect = 1.1
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 328 FITCGEDGTLSLWSILKKVPTHTIPVAHG 356
++ T+S+ T T+ V
Sbjct: 259 YVALSFCNTVSVIDTATNTITATMAVGKN 287
Score = 26.8 bits (57), Expect = 5.9
Identities = 11/39 (28%), Positives = 13/39 (33%), Gaps = 1/39 (2%)
Query: 140 PHRASITCIAVTSDSKHVYSAC-KDGIIIKWLLETRSKV 177
P IAVT D K VY A + T +
Sbjct: 241 PVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTIT 279
Score = 26.0 bits (55), Expect = 9.1
Identities = 4/44 (9%), Positives = 12/44 (27%), Gaps = 4/44 (9%)
Query: 365 NWITSVACLHNSD-LVASGSYDGCVKLWKITPKRTLEFLQDIPL 407
+A + + + S+ V + T + +
Sbjct: 244 PDPAGIAVTPDGKKVYVALSFCNTVSVIDT---ATNTITATMAV 284
Score = 26.0 bits (55), Expect = 9.7
Identities = 6/89 (6%), Positives = 24/89 (26%), Gaps = 4/89 (4%)
Query: 290 SGGTDKSVRVWKI---QEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKV 346
+ ++ V + + + + + G ++ + ++ +S+
Sbjct: 7 ANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPD-GTKVYVANAHSNDVSIIDTATNN 65
Query: 347 PTHTIPVAHGYDSSSSEPNWITSVACLHN 375
T+P + P+
Sbjct: 66 VIATVPAGSSPQGVAVSPDGKQVYVTNMA 94
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 38.7 bits (88), Expect = 0.001
Identities = 10/60 (16%), Positives = 26/60 (43%)
Query: 378 LVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWK 437
+ + + +W + + L Q + + G + +V + D ++L G+ E R ++
Sbjct: 6 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Score = 35.2 bits (79), Expect = 0.012
Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 245 TLY-SSSNDRSIKVWNIEDRAYVETL--FGHQSAITSLDILA-KNRVISSGGTDKSVRVW 300
T+Y +S + I VWN+ + + + + K + + V +
Sbjct: 5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY 64
Query: 301 KIQEESQL 308
+I +
Sbjct: 65 RIAPDDGA 72
Score = 35.2 bits (79), Expect = 0.013
Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 7/79 (8%)
Query: 205 VASGDNNSNIKLWS----SSLEHLHTFTGHKAPITGLAISFECDTLY-SSSNDRSIKVWN 259
+AS ++ I +W+ +L + + +S + LY + + +
Sbjct: 8 IASPESQQ-IHVWNLNHEGALTLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYR 65
Query: 260 IEDRAYVETLFGHQSAITS 278
I T + S
Sbjct: 66 IAPDDGALTFAAESALPGS 84
Score = 34.8 bits (78), Expect = 0.018
Identities = 22/299 (7%), Positives = 66/299 (22%), Gaps = 21/299 (7%)
Query: 140 PHRASITCIAVTSDSKHVYSACK-DGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAV 198
+ + V+ D +++Y + + ++ + + + S ++
Sbjct: 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGS-LTHISTDH 92
Query: 199 ANNNELVASGDNNSNIKLWSSSLEHLHTFTGHKAPITGLAISFECDTLYSSSNDRSIKVW 258
V S + + + + + + D
Sbjct: 93 QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRI 152
Query: 259 NIEDRAYVETLFGHQSAITSLDILAKNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGID 318
+ + L A + A R + ++ S V+ +
Sbjct: 153 CLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN 212
Query: 319 MTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDS-----------------SS 361
+ D + + H
Sbjct: 213 IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ 272
Query: 362 SEPNWITSVACLHNSD-LVASGSYDGCVKLWKITPKR-TLEFLQDIPLSGVINSLVFTS 418
H+ L+A+G + +++I ++ L + +V +
Sbjct: 273 PTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNA 331
Score = 28.6 bits (62), Expect = 1.7
Identities = 11/85 (12%), Positives = 24/85 (28%), Gaps = 11/85 (12%)
Query: 284 KNRVISSGGTDKSVRVWKIQEESQLVFNGHSRGIDMTRRVNDQQF--------ITCGEDG 335
K V + + + VW + E L ++ +D+ +V + +
Sbjct: 3 KQTVYIASPESQQIHVWNLNHEGALTL---TQVVDVPGQVQPMVVSPDKRYLYVGVRPEF 59
Query: 336 TLSLWSILKKVPTHTIPVAHGYDSS 360
+ + I T S
Sbjct: 60 RVLAYRIAPDDGALTFAAESALPGS 84
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 38.0 bits (87), Expect = 0.002
Identities = 29/255 (11%), Positives = 65/255 (25%), Gaps = 12/255 (4%)
Query: 183 VKTDRKSYPPILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHKAPITGLAISF 241
V + P + N + + I L S + + A +S
Sbjct: 13 VLVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAV-HISRMSA 71
Query: 242 ECDTLYSSSNDRSIKVWNIEDR-----AYVETLFGHQSAITSLDILAKNRVISSGGTDKS 296
L D I + ++ + A ++ +S +S ++R +G
Sbjct: 72 SGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPP 131
Query: 297 VRVWKIQEESQLVFNGHSRGIDMTRRVNDQQFITCGEDGTLSLWSILKKVPTHTIPVAHG 356
E + + D Q + S +
Sbjct: 132 QFAIMDGETLEPKQI-----VSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGK 186
Query: 357 YDSSSSEPNWITSVACLHNSDLVASGSYDGCVKLWKITPKRTLEFLQDIPLSGVINSLVF 416
+ + +V + + +A G +D + + + + +++LV
Sbjct: 187 VLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 246
Query: 417 TSDHKHLVAGIGTEH 431
H G H
Sbjct: 247 VGKTPHPGRGANFVH 261
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 37.7 bits (86), Expect = 0.002
Identities = 12/73 (16%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 190 YPPILALAVANNNELVASGDNNSNIKLWSSSLEHLHTFT--GHKAPITGLAISFECDTLY 247
PI +N L+A NN N+ +++ + + A +A+ + ++
Sbjct: 200 NYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDD-GSVV 258
Query: 248 SSSNDRSIKVWNI 260
+S D + ++
Sbjct: 259 LASKDYRLYIYRY 271
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 37.1 bits (85), Expect = 0.004
Identities = 12/114 (10%), Positives = 29/114 (25%), Gaps = 13/114 (11%)
Query: 328 FITCGEDGTLSLWSILKKVPTHTIPVAHGYDSSSSEPNWITSVACLHNSDLVASGSYDGC 387
+T + G ++L + + + + DG
Sbjct: 35 SVTLRDAGQIALIDGSTYEIKTVLDT----------GYAVHISRLSASGRYLFVIGRDGK 84
Query: 388 VKLWKI---TPKRTLEFLQDIPLSGVINSLVFTSDHKHLVAGIGTEHRFGRWKT 438
V + + P E + S + + K+ +AG ++
Sbjct: 85 VNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDG 138
Score = 37.1 bits (85), Expect = 0.004
Identities = 25/204 (12%), Positives = 54/204 (26%), Gaps = 14/204 (6%)
Query: 191 PPILALAVANNNELVASGDNNSNIKLW-SSSLEHLHTFTGHKAPITGLAISFECDTLYSS 249
P N + + I L S+ E A +S L+
Sbjct: 21 PTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV-HISRLSASGRYLFVI 79
Query: 250 SNDRSIKVWNIEDR-----AYVETLFGHQSAITSLDILAK-NRVISSGGTDKSVRVWKIQ 303
D + + ++ + A ++ +S TS + I+ + +
Sbjct: 80 GRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 139
Query: 304 EESQLVFNGHSRGIDMTRRVN---DQQFITCGEDGTLSLWSILKKVPTHTIPVAHGYDSS 360
+ + I + ++ T I + D +
Sbjct: 140 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV---KETGKILLVDYTDLN 196
Query: 361 SSEPNWITSVACLHNSDLVASGSY 384
+ + I++ LH+ L S Y
Sbjct: 197 NLKTTEISAERFLHDGGLDGSHRY 220
>d1qsda_ a.7.5.1 (A:) Tubulin chaperone cofactor A {Baker's yeast
(Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]}
Length = 102
Score = 29.3 bits (66), Expect = 0.25
Identities = 11/46 (23%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Query: 85 EEIEKVEKEKLNDSKDKHVLKKLETVVLEQEGKLRV-NIADRLANA 129
++ V K K + S D + LKK E V+ + K + + +++
Sbjct: 26 DQEAHVAKLKEDKSVDPYDLKKQEEVL--DDTKRLLPTLYEKIREF 69
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 27.2 bits (60), Expect = 5.2
Identities = 22/128 (17%), Positives = 36/128 (28%), Gaps = 23/128 (17%)
Query: 328 FITCGEDGTLSLWSILKKVPTHTIPV-----AHGYDSSSSEPNWITSVACLHNSDL---- 378
F + G G + + + IPV A G+ ++ + N D
Sbjct: 14 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPH 73
Query: 379 --VASGSYDG-----------CVKLWKITPKRTLEFLQDIPLSGVINSLVFTSDHKHLVA 425
+ G YDG V ++ +T + IP I+ L K
Sbjct: 74 ISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKIT-HIPNVQAIHGLRLQKVPKTNYV 132
Query: 426 GIGTEHRF 433
E
Sbjct: 133 FCNAEFVI 140
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 25.8 bits (56), Expect = 5.6
Identities = 10/35 (28%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 68 EDLTEQERKVILAK-KYLEEIEKVEKEKLNDSKDK 101
E+LT++E+++I E++E +E+E++ D+
Sbjct: 1 EELTDEEKEIINRVIARAEKMETMEQERIGRLVDR 35
>d1rt8a_ a.40.1.1 (A:) Fimbrin (Plastin), actin-crosslinking domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 505
Score = 26.9 bits (59), Expect = 6.1
Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Query: 148 IAVTSDSKHVYSACKDGIIIKWLLETRSKVCSSPFVKTDRKSYPPILALAVANN-NELVA 206
+ + +++ + CKDG+I+ L+ V +++ P+ N N ++
Sbjct: 27 VPINTETFEFFDQCKDGLILSKLINDSVPDTIDERVLNKQRNNKPLDNFKCIENNNVVIN 86
Query: 207 SGDNNSNIKLWSSSLEHLH 225
S I + + +
Sbjct: 87 SAKAMGGISITNIGAGDIL 105
>d1gm5a1 a.24.21.1 (A:7-105) RecG, N-terminal domain {Thermotoga
maritima [TaxId: 2336]}
Length = 99
Score = 25.2 bits (55), Expect = 8.4
Identities = 12/39 (30%), Positives = 25/39 (64%)
Query: 78 ILAKKYLEEIEKVEKEKLNDSKDKHVLKKLETVVLEQEG 116
L +++L E+EK+ K ++N + +LK+L+ +LE +
Sbjct: 14 TLLEEFLNEVEKMLKNQVNTRRIHQLLKELDDPLLENKD 52
>d1qkla_ a.143.1.2 (A:) RPB6 {Human (Homo sapiens) [TaxId: 9606]}
Length = 127
Score = 25.2 bits (55), Expect = 9.8
Identities = 8/48 (16%), Positives = 22/48 (45%)
Query: 47 DEDDEGIGFDSQDFEEHSEVEEDLTEQERKVILAKKYLEEIEKVEKEK 94
+++ +G FD + +E + E+ E+ ++ + E + +K
Sbjct: 5 EDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRI 52
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.130 0.377
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,629,044
Number of extensions: 74813
Number of successful extensions: 512
Number of sequences better than 10.0: 1
Number of HSP's gapped: 334
Number of HSP's successfully gapped: 136
Length of query: 454
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 366
Effective length of database: 1,199,356
Effective search space: 438964296
Effective search space used: 438964296
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 54 (25.5 bits)