Query psy17909
Match_columns 140
No_of_seqs 174 out of 1454
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 17:13:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy17909.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/17909hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qh5_A Glyoxalase II, protein 100.0 1.2E-31 4.2E-36 212.2 9.3 124 2-125 100-229 (260)
2 1xm8_A Glyoxalase II; structur 100.0 9.6E-29 3.3E-33 194.8 9.9 120 2-125 102-225 (254)
3 2qed_A Hydroxyacylglutathione 99.9 3.5E-28 1.2E-32 192.0 9.9 117 2-124 107-227 (258)
4 2p18_A Glyoxalase II; metallop 99.9 1.4E-27 4.7E-32 193.4 9.4 121 2-124 145-286 (311)
5 2gcu_A Putative hydroxyacylglu 99.8 4.8E-19 1.6E-23 138.5 10.1 90 2-123 107-205 (245)
6 4efz_A Metallo-beta-lactamase 99.8 5.1E-19 1.7E-23 141.1 9.9 94 2-123 137-243 (298)
7 2xf4_A Hydroxyacylglutathione 99.7 4E-17 1.4E-21 122.7 9.5 82 2-122 122-209 (210)
8 2zwr_A Metallo-beta-lactamase 99.7 5.4E-17 1.9E-21 122.3 9.2 81 3-123 116-202 (207)
9 3r2u_A Metallo-beta-lactamase 99.7 4.5E-17 1.5E-21 137.9 9.3 97 2-123 133-249 (466)
10 3tp9_A Beta-lactamase and rhod 99.7 6.3E-17 2.2E-21 136.4 6.4 97 2-123 113-229 (474)
11 1jjt_A IMP-1 metallo beta-lact 99.5 1.3E-13 4.5E-18 105.2 8.1 93 3-110 129-228 (228)
12 4eyb_A Beta-lactamase NDM-1; m 99.4 2.5E-13 8.7E-18 106.7 6.3 80 6-99 183-269 (270)
13 2fhx_A SPM-1; metallo-beta-lac 99.3 7.1E-12 2.4E-16 95.8 8.9 83 3-101 155-242 (246)
14 4hl2_A Beta-lactamase NDM-1; s 99.3 3.6E-12 1.2E-16 97.7 6.8 79 6-98 156-241 (243)
15 3iog_A Beta-lactamase; hydrola 99.3 2.1E-11 7.1E-16 91.8 8.8 82 3-100 137-225 (227)
16 2zo4_A Metallo-beta-lactamase 99.2 4.9E-11 1.7E-15 94.4 10.2 69 2-75 161-239 (317)
17 1a7t_A Metallo-beta-lactamase; 99.2 3.6E-11 1.2E-15 91.7 8.8 67 3-73 135-210 (232)
18 1m2x_A Class B carbapenemase B 99.2 9.1E-11 3.1E-15 88.8 10.2 86 2-101 124-217 (223)
19 1mqo_A Beta-lactamase II; alph 99.2 3.2E-11 1.1E-15 91.5 6.8 70 3-75 139-216 (227)
20 4ad9_A Lactb2, beta-lactamase- 99.2 1.1E-10 3.6E-15 91.7 9.5 67 2-75 136-206 (289)
21 3q6v_A Beta-lactamase; metallo 99.2 5.9E-11 2E-15 89.6 7.3 80 3-98 140-230 (233)
22 2y8b_A Metallo-B-lactamase; hy 99.1 7.7E-11 2.6E-15 92.1 7.5 67 4-73 169-243 (265)
23 3l6n_A Metallo-beta-lactamase; 99.1 8.3E-11 2.9E-15 88.3 7.3 69 2-73 128-204 (219)
24 1k07_A FEZ-1 beta-lactamase; m 99.1 5.5E-11 1.9E-15 92.1 6.3 65 3-71 140-217 (263)
25 2p97_A Hypothetical protein; p 99.1 1.9E-10 6.4E-15 86.3 8.9 65 3-72 109-184 (201)
26 2vw8_A PA1000, PQSE; quinolone 99.1 5.9E-10 2E-14 88.0 9.3 69 2-74 151-228 (303)
27 3hnn_A Putative diflavin flavo 99.0 2.2E-09 7.4E-14 83.6 9.6 86 2-100 144-254 (262)
28 3dha_A N-acyl homoserine lacto 99.0 1.3E-10 4.3E-15 89.3 2.2 68 4-72 165-242 (254)
29 3esh_A Protein similar to meta 98.9 6.9E-10 2.3E-14 86.8 5.3 68 4-73 177-255 (280)
30 3m8t_A 'BLR6230 protein; subcl 98.9 2.7E-09 9.4E-14 83.1 7.7 71 2-75 167-248 (294)
31 1sml_A Protein (penicillinase) 98.9 1.3E-08 4.5E-13 78.8 10.6 81 2-85 150-240 (269)
32 4ax1_B Metallo-beta-lactamase 98.8 3.8E-08 1.3E-12 76.7 9.3 70 2-73 172-254 (303)
33 2ohh_A Type A flavoprotein FPR 98.7 1.5E-08 5.1E-13 82.5 6.4 68 3-74 141-238 (404)
34 2cfu_A SDSA1; SDS-hydrolase, l 98.6 1.1E-07 3.7E-12 83.8 9.7 67 3-74 270-349 (658)
35 3aj3_A MLR6805 protein, 4-pyri 98.6 1.4E-08 4.8E-13 78.6 3.3 69 3-72 176-255 (274)
36 3adr_A Putative uncharacterize 98.6 1.1E-07 3.8E-12 72.7 6.5 65 2-73 138-211 (261)
37 1ztc_A Hypothetical protein TM 98.5 1.2E-08 4E-13 77.4 0.5 64 3-74 143-216 (221)
38 2q9u_A A-type flavoprotein; fl 98.5 5.5E-07 1.9E-11 73.8 10.4 66 3-73 142-234 (414)
39 4dik_A Flavoprotein; TM0755, e 98.5 5.9E-07 2E-11 75.2 9.1 65 2-73 152-244 (410)
40 2yhe_A SEC-alkyl sulfatase; hy 97.8 2.7E-08 9.4E-13 88.0 0.0 67 3-75 281-361 (668)
41 1p9e_A Methyl parathion hydrol 98.4 1.5E-07 5.1E-12 75.8 3.9 68 4-72 226-305 (331)
42 1ycg_A Nitric oxide reductase; 98.4 1.1E-06 3.7E-11 71.3 8.1 68 2-74 136-232 (398)
43 1e5d_A Rubredoxin\:oxygen oxid 98.4 1.5E-06 5.3E-11 70.5 8.9 67 3-74 136-231 (402)
44 2r2d_A AGR_PTI_140P, Zn-depend 98.3 1E-06 3.6E-11 67.9 5.3 67 4-71 182-261 (276)
45 3bk2_A RNAse J, metal dependen 89.0 0.24 8.4E-06 42.4 3.1 35 2-37 148-186 (562)
46 1zkp_A Hypothetical protein BA 78.5 1.4 4.9E-05 33.1 3.0 32 3-35 150-184 (268)
47 3zq4_A Ribonuclease J 1, RNAse 72.0 2.6 8.9E-05 36.0 3.3 33 2-36 133-170 (555)
48 4b87_A DNA cross-LINK repair 1 70.0 3.8 0.00013 33.2 3.7 15 24-38 136-150 (367)
49 3g1p_A Protein PHNP; C-P lyase 69.0 5.2 0.00018 29.9 4.1 30 2-33 134-167 (258)
50 2ycb_A Beta-CAsp RNAse, cleava 64.9 30 0.001 29.8 8.5 23 8-31 325-353 (636)
51 2az4_A Hypothetical protein EF 48.9 13 0.00046 29.8 3.4 33 3-36 159-195 (429)
52 2i7t_A Cleavage and polyadenyl 47.9 9.8 0.00034 31.1 2.5 12 23-34 172-183 (459)
53 2nyg_A YOKD protein; PFAM02522 47.5 18 0.00061 28.3 3.8 44 28-74 29-76 (273)
54 4fc9_B Uncharacterized protein 47.2 1.5 5.2E-05 32.5 -2.3 59 69-132 10-71 (208)
55 3ijw_A Aminoglycoside N3-acety 46.1 16 0.00056 28.6 3.4 43 28-73 31-77 (268)
56 3af5_A Putative uncharacterize 45.6 13 0.00046 32.1 3.1 27 3-31 336-368 (651)
57 2xr1_A Cleavage and polyadenyl 44.6 12 0.00042 32.3 2.7 27 3-31 324-356 (640)
58 3sma_A FRBF; N-acetyl transfer 42.7 17 0.00059 28.8 3.1 44 28-74 38-85 (286)
59 2bib_A CBPE, teichoic acid pho 37.3 33 0.0011 28.5 4.2 49 23-84 196-246 (547)
60 3iek_A Ribonuclease TTHA0252; 36.4 21 0.00071 29.1 2.7 27 8-35 141-167 (431)
61 3jyw_S 60S ribosomal protein L 34.5 8.3 0.00028 22.3 -0.0 8 64-71 5-12 (45)
62 2i7x_A Protein CFT2; polyadeny 33.3 26 0.0009 30.9 3.0 28 3-32 150-181 (717)
63 3zdk_A 5' exonuclease apollo; 31.4 24 0.00081 28.1 2.2 12 23-34 114-125 (336)
64 3md7_A Beta-lactamase-like; ss 29.1 42 0.0015 25.3 3.3 27 2-33 182-212 (293)
65 3j21_V 50S ribosomal protein L 25.6 15 0.0005 22.9 -0.0 8 64-71 13-20 (66)
66 1vq8_U 50S ribosomal protein L 24.3 16 0.00054 22.8 -0.0 8 64-71 12-19 (66)
67 4eo0_A Attachment protein G3P; 23.3 25 0.00086 23.6 0.8 18 22-39 71-88 (115)
No 1
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.97 E-value=1.2e-31 Score=212.21 Aligned_cols=124 Identities=44% Similarity=0.684 Sum_probs=112.2
Q ss_pred eeEEEEEeCCe----EEEEe-ccc-CCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCccc
Q psy17909 2 ALGDTLFVAGA----GKFFE-GDG-AFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNN 75 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~-~~~-~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~n 75 (140)
..+++++|||| ++|+. ... ...+++||||++|.+++|++++|+.++|++||++++..||++++||||||+..+|
T Consensus 100 ~~~~vi~tPGHt~g~~~~~~~~~~~~~~~~lftGD~l~~~~~g~~~~~~~~~~~~Sl~~~l~~l~~~~~v~pgHg~~~~~ 179 (260)
T 1qh5_A 100 LNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINN 179 (260)
T ss_dssp EEEEEEECCSSSTTCEEEEEECSSSSSCCEEEEETTEETTEECCCTTCCHHHHHHHHHTTTTTSCTTCEEEESBCCHHHH
T ss_pred EEEEEEECCCCCCCCEEEEEeccCCCCCCEEEEcCccccCCcCCCCCCCHHHHHHHHHHHHHcCCCCeEEEcCCCchhcc
Confidence 36899999999 56654 211 2468999999999999999999999999999976799999999999999999999
Q ss_pred cccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCcceecc
Q psy17909 76 LYFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGMVM 125 (140)
Q Consensus 76 l~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~~~ 125 (140)
++|+.+++|+|+.++++++|++++++++.+|+||||++||++|||+|+..
T Consensus 180 ~~f~~~v~p~~~~l~~~~~~~~~~~~~~~~t~psti~~E~~~Npfl~~~~ 229 (260)
T 1qh5_A 180 LKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVRE 229 (260)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHTCCCCCEEHHHHHHHCTTTTTTS
T ss_pred HHHHHhhCCCcHHHHHHHHHHHHHHhcCCCcCCcCHHHHHhcCCcccCCC
Confidence 99999999999999999999999999999999999999999999999854
No 2
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.95 E-value=9.6e-29 Score=194.80 Aligned_cols=120 Identities=30% Similarity=0.499 Sum_probs=110.6
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCccccc
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNNLY 77 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~nl~ 77 (140)
..+++++|||| ++|+.. +.+++||||++|.+++|++++|+.+++++||+ +|..||+++.||||||+...|.+
T Consensus 102 ~~~~vi~tPGHt~g~~~~~~~---~~~~lftGD~l~~~~~g~~~~~~~~~~~~Sl~-~l~~l~~~~~v~pgHg~~~~~~~ 177 (254)
T 1xm8_A 102 HEVHVMDTPGHTKGHISLYFP---GSRAIFTGDTMFSLSCGKLFEGTPKQMLASLQ-KITSLPDDTSIYCGHEYTLSNSK 177 (254)
T ss_dssp EEEEEEECCSSSSSCEEEEEG---GGTEEEEETTEETTEECCCSSSCHHHHHHHHH-HHHTSCTTCEEEESBCCHHHHHH
T ss_pred EEEEEEECCCCCCCcEEEEEC---CCCEEEEcCccccCCCCCCCCCCHHHHHHHHH-HHHccCCCcEEEeCCcchhcchh
Confidence 36899999999 566653 25799999999999999988999999999998 69999999999999999999999
Q ss_pred cccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCcceecc
Q psy17909 78 FSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGMVM 125 (140)
Q Consensus 78 fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~~~ 125 (140)
|+.+++|+|..++.+++++++++++|.+++||||++||++|||+|...
T Consensus 178 ~~~~~~~~~~~l~~~~~~v~~~~~~g~~~~~tti~~e~~~Npfl~~~~ 225 (254)
T 1xm8_A 178 FALSLEPNNEVLQSYAAHVAELRSKKLPTIPTTVKMEKACNPFLRSSN 225 (254)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCTTC
T ss_pred hhhhcCCCcHHHHHHHHHHHHHHhCCCCcCCccHHHHhhcCCeecCCC
Confidence 999999999999999999999999999999999999999999999753
No 3
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.95 E-value=3.5e-28 Score=191.95 Aligned_cols=117 Identities=28% Similarity=0.464 Sum_probs=109.5
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCccccc
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNNLY 77 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~nl~ 77 (140)
..+++++|||| ++|+ . .+++||||++|.+++|++++|+.++|++||+ +|..||++++||||||+..+|++
T Consensus 107 ~~~~vi~tPGHt~g~~~~~-~----~~~lftGD~l~~~~~g~~~~~~~~~~~~sl~-~l~~l~~~~~v~pgHg~~~~~~~ 180 (258)
T 2qed_A 107 EKFTLFATPGHTLGHVCYF-S----RPYLFCGDTLFSGGCGRLFEGTPSQMYQSLM-KINSLPDDTLICCAHEYTLANIK 180 (258)
T ss_dssp EEEEEEECCSSSTTCEEEE-E----TTEEEEETTEETTEECCCSSSCHHHHHHHHH-HHHTSCTTCEEEESBCCHHHHHH
T ss_pred cEEEEEECCCCCCCCeEEE-c----CCEEEECCCCCCCCcCCCCCCCHHHHHHHHH-HHHcCCCCeEEECCCcchhhchh
Confidence 36899999999 6666 2 5799999999999999988999999999997 68999999999999999999999
Q ss_pred cccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCcceec
Q psy17909 78 FSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGMV 124 (140)
Q Consensus 78 fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~~ 124 (140)
|+.+++|.++.++++++++++++++|.+++||||++|+++|||+|..
T Consensus 181 f~~~~~p~~~~l~~~~~~v~~~~~~g~~~~~tti~~e~~~np~l~~~ 227 (258)
T 2qed_A 181 FALSILPHDSFINEYYRKVKELRVKKQMTLPVILKNERKINLFLRTE 227 (258)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCGGGCTT
T ss_pred HhhhcCcccHHHHHHHHHHHHHHHcCCCCCCCcHHHHHhhCceeccC
Confidence 99999999999999999999999999999999999999999999975
No 4
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.94 E-value=1.4e-27 Score=193.35 Aligned_cols=121 Identities=24% Similarity=0.346 Sum_probs=109.7
Q ss_pred eeEEEEEeCCe----EEEEecccCC---C-CeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcC--------CCCeEE
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAF---V-TSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKL--------PNETKV 65 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~---~-~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~l--------p~~t~i 65 (140)
..+++++|||| ++|+... ++ . +++||||++|.+++|+++++|.++|++||+ +|..| |++++|
T Consensus 145 ~~l~vi~tPGHT~g~i~~~~~~-~~~~~~~~~lftGD~l~~~~~g~~~~~~~~~~~~Sl~-kl~~l~~~~~~~~~~~~~v 222 (311)
T 2p18_A 145 LSVEVIDAPCHTRGHVLYKVQH-PQHPNDGVALFTGDTMFIAGIGAFFEGDEKDMCRAME-KVYHIHKGNDYALDKVTFI 222 (311)
T ss_dssp EEEEEEECCSSSTTCEEEEEEC-TTCGGGCEEEEEETTEETTEECCCTTSCHHHHHHHHH-HHHTTTGGGTTGGGGGEEE
T ss_pred eEEEEEECCCCCcccEEEEEec-CCcCCcCCEEEEcCccccCCcCCCCCCCHHHHHHHHH-HHHHhhhcccccCCCCeEE
Confidence 36899999999 5555421 12 4 799999999999999988999999999998 69999 888999
Q ss_pred EcCCCCCccccccccccCCC-----cHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCcceec
Q psy17909 66 FCGHEYTVNNLYFSKHVEPN-----NTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGMV 124 (140)
Q Consensus 66 ~PGHg~~~~nl~fa~~~~~~-----n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~~ 124 (140)
|||||+...|++|+.+++|+ ++.++++++|+++++++|.+++||||++|+++|||+|+.
T Consensus 223 ~pgHg~~~~~~~f~~~~~p~~~~~~~~~~~~~~~~v~~~~~~g~~t~psti~~E~~~npfl~~~ 286 (311)
T 2p18_A 223 FPGHEYTSGFMTFSEKTFPDRASDDLAFIQAQRAKYAAAVKTGDPSVPSSLAEEKRQNLFLRVA 286 (311)
T ss_dssp EESBCCHHHHHHHHHHHCSCTTSHHHHHHHHHHHHHHHHHHTTCCCCCEEHHHHHHHCTTGGGG
T ss_pred EeCCCchhhhhHHHHHhCCCccchhhHHHHHHHHHHHHHHHcCCCCCCccHHHHhhcCccccCC
Confidence 99999999999999999998 999999999999999999999999999999999999985
No 5
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.79 E-value=4.8e-19 Score=138.45 Aligned_cols=90 Identities=22% Similarity=0.420 Sum_probs=74.1
Q ss_pred eeEEEEEeCCe----EEEEecccC---CCCeeEEcceecCCCccC--CCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGA---FVTSPLSGDTLFVAGAGK--FFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYT 72 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~---~~~~lFtGDtLf~g~~Gr--~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~ 72 (140)
..+++++|||| ++|+..+.. ...++||||++|.+++|+ +++++.+++++||++++..|+++++|||||++.
T Consensus 107 ~~i~v~~tpGHt~g~~~~~~~~~~~~~~~~~lftGD~~~~~~~~~~d~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~~ 186 (245)
T 2gcu_A 107 IYLEVRATPGHTAGCVTYVTGEGADQPQPRMAFTGDAVLIRGCGRTDFQEGSSDQLYESVHSQIFTLPKDTLIYPAHDYK 186 (245)
T ss_dssp EEEEEEECCSSSTTCEEEEECCSTTSCSSCEEEEETTSBTTBCCCCSSTTCCHHHHHHHHHHHTTTSCTTCEEEESBCSS
T ss_pred EEEEEEECCCCCCCCEEEEECCccccccccEEEECCccccCCccCCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCC
Confidence 46899999999 555554210 126999999999999999 678999999999944799999999999999994
Q ss_pred ccccccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCccee
Q psy17909 73 VNNLYFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGM 123 (140)
Q Consensus 73 ~~nl~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~ 123 (140)
.. .+||+++||++|||++.
T Consensus 187 ~~--------------------------------~~sti~~e~~~n~~l~~ 205 (245)
T 2gcu_A 187 GF--------------------------------EVSTVGEEMQHNPRLTK 205 (245)
T ss_dssp SC--------------------------------CCEEHHHHHHHCTTTTS
T ss_pred CC--------------------------------CCcCHHHHHhhCcccCC
Confidence 21 38999999999999983
No 6
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.78 E-value=5.1e-19 Score=141.06 Aligned_cols=94 Identities=22% Similarity=0.355 Sum_probs=73.9
Q ss_pred eeEEEEEeCCe----EEEEeccc-----CCCCeeEEcceecCCCcc--C--CCCCCHHHHHHHHHHHHhcCCCCeEEEcC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDG-----AFVTSPLSGDTLFVAGAG--K--FFEGDGAEMHHNLNVKLAKLPNETKVFCG 68 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~-----~~~~~lFtGDtLf~g~~G--r--~~~gd~~~~~~Sl~~~l~~lp~~t~i~PG 68 (140)
.++++++|||| ++|+..+. ....++||||+||.+++| | +++||++++++||+ +|..||++++||||
T Consensus 137 ~~i~vi~tPGHT~g~~~~~~~~~~~~~~~~~~~lftGD~l~~~~~g~~r~d~~~~d~~~~~~Sl~-kl~~L~~~~~v~pg 215 (298)
T 4efz_A 137 LSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSIR-KVLSLPPATRLYMC 215 (298)
T ss_dssp EEEEEEECCSSSTTCEEEEEEETTCCGGGCBCEEECCSSBCCTTTCBCCCCSTTCCHHHHHHHHH-HHTTSCTTCEEECS
T ss_pred EEEEEEECCCCCcccEEEEECCCcccccCCceEEEEcCccccCCCCCccCCCCCCCHHHHHHHHH-HHhcCCCCEEEECC
Confidence 36899999999 45554321 011299999999998666 7 77899999999998 69999999999999
Q ss_pred CCCCccccccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCccee
Q psy17909 69 HEYTVNNLYFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGM 123 (140)
Q Consensus 69 Hg~~~~nl~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~ 123 (140)
|+|...+ + .+...||+++||++|||++.
T Consensus 216 Hg~~~~~------------------------~---~~~~~sti~~e~~~n~~l~~ 243 (298)
T 4efz_A 216 HDYQPNG------------------------R---AIQYASTVADELRENVHIRE 243 (298)
T ss_dssp BCSCC------------------------------CCCCEEEHHHHHHHCTTTST
T ss_pred CCCCccC------------------------C---CCCCccCHHHHHhhCHhhcC
Confidence 9996432 0 23458999999999999974
No 7
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.71 E-value=4e-17 Score=122.72 Aligned_cols=82 Identities=26% Similarity=0.398 Sum_probs=70.4
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccC--CCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCccc
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGK--FFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNN 75 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr--~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~n 75 (140)
..+++++|||| ++++.. +.+++|+||+++.+++|+ ++.++.+++++|+++++..+++++.|+||||+
T Consensus 122 ~~i~~~~~pgHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~l~~~~~v~pgHg~---- 194 (210)
T 2xf4_A 122 VTLQVLHCPGHTPGHVVFFDE---QSQLLISGDVIFKGGVGRSDFPRGDHTQLIDAIKRKLLPLGDDVTFIPGHGP---- 194 (210)
T ss_dssp EEEEEEECCSSSTTCEEEEET---TTTEEEEETSEETTEECCCCSTTCCHHHHHHHHHHHTGGGCTTCEEEESSSC----
T ss_pred eEEEEEECCCCCCCcEEEEeC---CCCEEEECCEeccCCcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEECCCCC----
Confidence 35899999999 555553 468999999999988887 67889999999995578999988899999998
Q ss_pred cccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCcce
Q psy17909 76 LYFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMG 122 (140)
Q Consensus 76 l~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr 122 (140)
++++++||++|||++
T Consensus 195 --------------------------------~~~~~~~~~~n~~~~ 209 (210)
T 2xf4_A 195 --------------------------------LSTLGYERLHNPFLQ 209 (210)
T ss_dssp --------------------------------CEEHHHHHHHCTTC-
T ss_pred --------------------------------cccHHHHhhhCchhc
Confidence 889999999999986
No 8
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.70 E-value=5.4e-17 Score=122.29 Aligned_cols=81 Identities=26% Similarity=0.365 Sum_probs=69.6
Q ss_pred eEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccC--CCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCcccc
Q psy17909 3 LGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGK--FFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNNL 76 (140)
Q Consensus 3 ~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr--~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~nl 76 (140)
.+++++|||| ++++.. +.+++|+||++|.+++|+ ++++|..++++||+ ++..+++++.|+||||+
T Consensus 116 ~~~~~~~pGHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~~~i~pgHg~----- 186 (207)
T 2zwr_A 116 GFQVLHLPGHSPGHVAFYDP---EGAQVFSGDLLFRGSVGRYDLPGADPKALFASLK-RLLSLPPETRVHPGHGP----- 186 (207)
T ss_dssp TEEEEECCSSSTTCEEEEET---TTTEEEEETSEETTEECCSSSTTCCHHHHHHHHH-HHTTSCTTCEEEESBSC-----
T ss_pred EEEEEeCCCCCCCcEEEEEC---CCCEEEEecccCCCCcCCCCCCCCCHHHHHHHHH-HHhcCCCCCEEECCCCC-----
Confidence 4789999999 566553 368999999999988887 67889999999998 68899988899999998
Q ss_pred ccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCccee
Q psy17909 77 YFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGM 123 (140)
Q Consensus 77 ~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~ 123 (140)
++++++|++.|||++.
T Consensus 187 -------------------------------~~~~~~e~~~n~~l~~ 202 (207)
T 2zwr_A 187 -------------------------------GTTLGLEARTNPFLTG 202 (207)
T ss_dssp -------------------------------CEEHHHHHHHCTTC--
T ss_pred -------------------------------CCcHHHHhhhChhhhh
Confidence 7899999999999973
No 9
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.69 E-value=4.5e-17 Score=137.86 Aligned_cols=97 Identities=21% Similarity=0.275 Sum_probs=73.1
Q ss_pred eeEEEEEeCCe----EEEEeccc----CCCCeeEEcceecCCCccC--CCC------CC----HHHHHHHHHHHHhcCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDG----AFVTSPLSGDTLFVAGAGK--FFE------GD----GAEMHHNLNVKLAKLPN 61 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~----~~~~~lFtGDtLf~g~~Gr--~~~------gd----~~~~~~Sl~~~l~~lp~ 61 (140)
.++++++|||| ++|+..+. ....++||||+||.+++|| +++ |+ .+++++||+ +|..||+
T Consensus 133 ~~l~vi~tPGHT~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~gr~dl~~~~~~~~g~~~~~~~~~~~Sl~-kl~~L~~ 211 (466)
T 3r2u_A 133 IKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEKAVKVEGSSEIGAKQMFKSIE-SIKDLPD 211 (466)
T ss_dssp EEEEEEECCSSSTTCEEEEEECGGGTCCSCCEEEEETTBCSSCBCCCCCCCGGGCCTTHHHHHHHHHHHHHH-HHTTSCT
T ss_pred EEEEEEECCCCCCCCEEEEEcCCCccCCCceEEEECCcccCCCCCCcCccccccccCCCchHHHHHHHHHHH-HHhcCCC
Confidence 36899999999 55554321 2234999999999999999 552 43 799999998 6999999
Q ss_pred CeEEEcCCCCCccccccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCccee
Q psy17909 62 ETKVFCGHEYTVNNLYFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGM 123 (140)
Q Consensus 62 ~t~i~PGHg~~~~nl~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~ 123 (140)
+++||||||+....-+.. .....||+++||++|||++.
T Consensus 212 ~~~v~PgHg~~s~~~~~~------------------------~~~~~stig~e~~~n~~l~~ 249 (466)
T 3r2u_A 212 YIQIWPGHGAGSPCGKSL------------------------GAIPTSTLGYEKQTNWAFSE 249 (466)
T ss_dssp TCEEEESBCTTCGGGTTC------------------------CSSSCEEHHHHHHHCGGGTC
T ss_pred CeEEECCCCCCccccccc------------------------CCCCCccHHHHHHhChhcCC
Confidence 999999999853211100 01137999999999999986
No 10
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=6.3e-17 Score=136.41 Aligned_cols=97 Identities=21% Similarity=0.278 Sum_probs=72.4
Q ss_pred eeEEEEEeCCe----EEEEecccC----CCCeeEEcceecCCCccC--CCC------CC----HHHHHHHHHHHHhcCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGA----FVTSPLSGDTLFVAGAGK--FFE------GD----GAEMHHNLNVKLAKLPN 61 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~----~~~~lFtGDtLf~g~~Gr--~~~------gd----~~~~~~Sl~~~l~~lp~ 61 (140)
.++++++|||| ++|+..+.. ..+++||||++|.+++|| +++ ++ .+++++||++ |..||+
T Consensus 113 ~~i~~i~tPGHt~g~~~~~~~~~~~~~~~~~~lftGD~lf~~~~g~~dl~~~~~~~~~~~~~~~~~~~~sl~~-l~~l~~ 191 (474)
T 3tp9_A 113 VRIVVMHTPGHTPEHVSYLLYDGKTSPDVPMALFSGDFVFVGDVGRPDLLERVAGESGSSEALARQMFRSLRK-FEALPD 191 (474)
T ss_dssp EEEEEEECCSSSSSCEEEEEEETTTEEEEEEEEEEETSEETTEECCSCHHHHHSCCTTHHHHHHHHHHHHHHH-HHTSCT
T ss_pred EEEEEEECCCCCCCCEEEEEecCCCCCCCceEEEeCCccccCCCCCCCCCccccCCCccchHHHHHHHHHHHH-HhcCCC
Confidence 46899999999 455543210 116999999999999999 443 33 7899999995 999999
Q ss_pred CeEEEcCCCCCccccccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCccee
Q psy17909 62 ETKVFCGHEYTVNNLYFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGM 123 (140)
Q Consensus 62 ~t~i~PGHg~~~~nl~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~ 123 (140)
+++||||||+...+-+...+ ...||+++||++|||++.
T Consensus 192 ~~~v~PgHg~~s~~~~~~~~------------------------~~~sti~~e~~~n~~l~~ 229 (474)
T 3tp9_A 192 HVQVLPAHGAGSACGKALGA------------------------VPSSTVGYEKLVNWALQH 229 (474)
T ss_dssp TCEEEESBCTTCTTSSSCCB------------------------SSCEEHHHHHHHCGGGTC
T ss_pred CcEEECCCCCCcccccccCC------------------------CcCCCHHHHHHhChhcCc
Confidence 99999999985432111111 137999999999999983
No 11
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.46 E-value=1.3e-13 Score=105.22 Aligned_cols=93 Identities=14% Similarity=0.064 Sum_probs=66.3
Q ss_pred eEEEE-EeCCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhc-CCCCeEEEcCCCCCcccc
Q psy17909 3 LGDTL-FVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAK-LPNETKVFCGHEYTVNNL 76 (140)
Q Consensus 3 ~~~vi-~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~-lp~~t~i~PGHg~~~~nl 76 (140)
.++++ +|||| ++|+.. +.++||+||+++.+++|+++.+|..++++||++ +.. +++...|+||||+...
T Consensus 129 ~i~~~~~~pGHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~d~~~~~~sl~~-l~~~~~~~~~i~pgHg~~~~-- 202 (228)
T 1jjt_A 129 KIEVFYPGPGHTPDNVVVWLP---ERKILFGGCFIKPYGLGNLGDANIEAWPKSAKL-LKSKYGKAKLVVPSHSEVGD-- 202 (228)
T ss_dssp TEEEECCCCSSSTTCCEEEET---TTTEEEEETTCCTTCCCCCTTCCTTTHHHHHHH-HHHHTTTCSEEEESSSCCBC--
T ss_pred eEEEEecCCCCCCCcEEEEEC---CCcEEEEeccccccccCccCccCHHHHHHHHHH-HHhhcCCCCEEEcCCCCcCC--
Confidence 47887 89999 566554 368999999999888888778899999999985 555 5666799999999654
Q ss_pred ccccccCCCcHHHHHHHH-HHHHHhhcCCCCCCcc
Q psy17909 77 YFSKHVEPNNTRIAEKLK-WAIEKRERKEPTVPST 110 (140)
Q Consensus 77 ~fa~~~~~~n~~i~~~l~-~~~~~~~~~~~~~~st 110 (140)
++.++..++ .++..++.+.|++|||
T Consensus 203 ---------~~~~~~~~~~~~~~~~~~~~p~~p~~ 228 (228)
T 1jjt_A 203 ---------ASLLKLTLEQAVKGLNESKKPSKPSN 228 (228)
T ss_dssp ---------THHHHHHHHHHHHHHHHHHC------
T ss_pred ---------HHHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 355665554 4555667778888876
No 12
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.40 E-value=2.5e-13 Score=106.73 Aligned_cols=80 Identities=11% Similarity=-0.014 Sum_probs=59.6
Q ss_pred EEEeCCe----EEEEecccCCCCeeEEcceecCCCccC---CCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCcccccc
Q psy17909 6 TLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGK---FFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNNLYF 78 (140)
Q Consensus 6 vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr---~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~nl~f 78 (140)
++++||| ++++.. +.++||+||++|.++.++ ++++|.+++++||++++..+|+.++|+||||+..
T Consensus 183 ~~~~pgHT~g~~~~~~~---~~~vLfsGD~l~~~~~~~~~~~~~~~~~~~~~Sl~~l~~~~~d~~~v~PGHG~p~----- 254 (270)
T 4eyb_A 183 FYPGPGHTSDNITVGID---GTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPD----- 254 (270)
T ss_dssp ECCCSSSSSSCCEEEET---TSSEEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCB-----
T ss_pred EecccccCCCCEEEEec---CCcEEEEeCeecCCCCCCcCCCCCCCHHHHHHHHHHHHhhCCCCcEEEcCCCCCC-----
Confidence 4455666 566654 478999999999988876 4678999999999965556788889999999853
Q ss_pred ccccCCCcHHHHHHHHHHHHH
Q psy17909 79 SKHVEPNNTRIAEKLKWAIEK 99 (140)
Q Consensus 79 a~~~~~~n~~i~~~l~~~~~~ 99 (140)
+.+.++..++++++.
T Consensus 255 ------~~~~l~~t~~~~e~l 269 (270)
T 4eyb_A 255 ------SRAAITHTARMADKL 269 (270)
T ss_dssp ------CTHHHHHHHHHHHTT
T ss_pred ------CHHHHHHHHHHHHHh
Confidence 235666666665543
No 13
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.31 E-value=7.1e-12 Score=95.79 Aligned_cols=83 Identities=13% Similarity=0.036 Sum_probs=65.1
Q ss_pred eEEEEE-eCCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCccccc
Q psy17909 3 LGDTLF-VAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNNLY 77 (140)
Q Consensus 3 ~~~vi~-tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~nl~ 77 (140)
.+++++ +||| ++++.. +.+++|+||+++.+.++.++.+|..++++||+ ++..++.+ .|+||||+...
T Consensus 155 ~i~~~~~~pGHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~-~i~pgHg~~~~--- 226 (246)
T 2fhx_A 155 LVEVSFPGPAHSPDNVVVYFP---KKKLLFGGCMIKPKELGYLGDANVKAWPDSAR-RLKKFDAK-IVIPGHGEWGG--- 226 (246)
T ss_dssp EEEEECCCCSSSTTCCEEEET---TTTEEEEETTCCSSCCCCCTTCCTTTHHHHHH-HGGGSCCS-EEEESBSCCBS---
T ss_pred EEEEEeCCCCCCCCCEEEEEc---CCCEEEECCEeccCCCCCCCCCCHHHHHHHHH-HHHhCCCC-EEECCCCCcCC---
Confidence 578886 8988 566554 36899999999987777777889999999998 68889664 89999998532
Q ss_pred cccccCCCcHHHHHHHHHHHHHhh
Q psy17909 78 FSKHVEPNNTRIAEKLKWAIEKRE 101 (140)
Q Consensus 78 fa~~~~~~n~~i~~~l~~~~~~~~ 101 (140)
.+.+++.++++++..+
T Consensus 227 --------~~~l~~~~~~l~~l~~ 242 (246)
T 2fhx_A 227 --------PEMVNKTIKVAEKAVG 242 (246)
T ss_dssp --------THHHHHHHHHHHHHHH
T ss_pred --------HHHHHHHHHHHHHHHH
Confidence 3677777777766543
No 14
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.30 E-value=3.6e-12 Score=97.74 Aligned_cols=79 Identities=11% Similarity=0.027 Sum_probs=60.0
Q ss_pred EEEeCCe----EEEEecccCCCCeeEEcceec---CCCccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCcccccc
Q psy17909 6 TLFVAGA----GKFFEGDGAFVTSPLSGDTLF---VAGAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNNLYF 78 (140)
Q Consensus 6 vi~tPGH----~~~~~~~~~~~~~lFtGDtLf---~g~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~nl~f 78 (140)
++++||| ++++.. +.+++|+||++| .+++|+++.+|..++++||++++..+|+.++|+||||....
T Consensus 156 ~~~~pGHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~l~~~~~v~pgHg~~~~---- 228 (243)
T 4hl2_A 156 FYPGPGHTSDNITVGID---GTDIAFGGCLIKDSKAKSLGNLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDS---- 228 (243)
T ss_dssp ECCCSSSSTTCCEEEET---TTTEEECTTTCCCTTCSCCCCCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC----
T ss_pred EeCCCCCCcCCEEEEEc---CCCEEEEcceeeeccCCCcCCCCCCCHHHHHHHHHHHHhhCCCceEEEeCCCCcCc----
Confidence 4578888 555554 368999999999 67888888999999999999654468888899999999532
Q ss_pred ccccCCCcHHHHHHHHHHHH
Q psy17909 79 SKHVEPNNTRIAEKLKWAIE 98 (140)
Q Consensus 79 a~~~~~~n~~i~~~l~~~~~ 98 (140)
.+.++...+++++
T Consensus 229 -------~~~i~~~~~~l~~ 241 (243)
T 4hl2_A 229 -------RAAITHTARMADK 241 (243)
T ss_dssp -------THHHHHHHHHHHT
T ss_pred -------HHHHHHHHHHHHh
Confidence 3555555555543
No 15
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.25 E-value=2.1e-11 Score=91.81 Aligned_cols=82 Identities=15% Similarity=0.126 Sum_probs=64.7
Q ss_pred eEEEEEe-CCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHh--cCCCCeEEEcCCCCCccc
Q psy17909 3 LGDTLFV-AGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLA--KLPNETKVFCGHEYTVNN 75 (140)
Q Consensus 3 ~~~vi~t-PGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~--~lp~~t~i~PGHg~~~~n 75 (140)
.+++++| ||| ++++.. +.++|| ||++|.+++|++..+|..++.+|++ +|. .++.+ .|+||||....+
T Consensus 137 ~~~~~~~~pGHt~g~~~~~~~---~~~~lf-gd~l~~~~~~~~~~~~~~~~~~sl~-~l~~~~l~~~-~i~pgHg~~~~~ 210 (227)
T 3iog_A 137 KVRAFYAGPAHTPDGIFVYFP---DEQVLY-GGCILKEKLGNLSFADVKAYPQTLE-RLKAMKLPIK-TVIGGHDSPLHG 210 (227)
T ss_dssp TEEEECCCCSSSSSCCEEEET---TTTEEE-CGGGSCSSCCCCTTCCTTHHHHHHH-HHHHTCCCCS-EEECSSSCCEEC
T ss_pred EEEEEecCCCCCCCcEEEEec---CCCEEE-cccccccCCCCcCcCCHHHHHHHHH-HHHhccCCCC-EEEeCCCCCcCC
Confidence 4789997 999 556554 367999 9999999999988889999999998 576 67776 899999986542
Q ss_pred cccccccCCCcHHHHHHHHHHHHHh
Q psy17909 76 LYFSKHVEPNNTRIAEKLKWAIEKR 100 (140)
Q Consensus 76 l~fa~~~~~~n~~i~~~l~~~~~~~ 100 (140)
.+.++...++++++.
T Consensus 211 ----------~~~i~~~~~~~~~~~ 225 (227)
T 3iog_A 211 ----------PELIDHYEALIKAAP 225 (227)
T ss_dssp ----------THHHHHHHHHHHHST
T ss_pred ----------HHHHHHHHHHHHHhc
Confidence 366777777776654
No 16
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.23 E-value=4.9e-11 Score=94.39 Aligned_cols=69 Identities=20% Similarity=0.279 Sum_probs=54.2
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccC---C---CCCCHHHHHHHHHHHHhcCCCCeEEEcCCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGK---F---FEGDGAEMHHNLNVKLAKLPNETKVFCGHEY 71 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr---~---~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~ 71 (140)
..+++++|||| ++++.. +.+++|+||+++.+..++ . +..+..++++||+ ++..++.+ .|+||||.
T Consensus 161 ~~~~~i~tpGHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~-~v~pgHg~ 235 (317)
T 2zo4_A 161 KRLRVLWTPGHADGHAAFYLE---EEGVLLAGDALLEKVSPNVGLWAYTRENPLKDFLRSLD-RLADLGAR-VAYAGHFG 235 (317)
T ss_dssp EEEEEEECCSSSTTCEEEEET---TTTEEEEETSCCSSSCCCCCCCTTSCSCHHHHHHHHHH-HHHTSCCS-EEEESSSS
T ss_pred ceEEEEECCCCCcccEEEEeC---CCCEEEECCEecCCCCCCCcccCCCCCchHHHHHHHHH-HHhcCCCC-EEECCCCC
Confidence 36899999999 566653 468999999999876544 2 2357889999998 68899765 89999999
Q ss_pred Cccc
Q psy17909 72 TVNN 75 (140)
Q Consensus 72 ~~~n 75 (140)
...+
T Consensus 236 ~~~~ 239 (317)
T 2zo4_A 236 PIAD 239 (317)
T ss_dssp CBSC
T ss_pred ccCC
Confidence 7654
No 17
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.22 E-value=3.6e-11 Score=91.65 Aligned_cols=67 Identities=15% Similarity=0.114 Sum_probs=52.9
Q ss_pred eEEEEE-eCCe----EEEEecccCCCCeeEEcceec---CCCccCCCCCCHHHHHHHHHHHHhc-CCCCeEEEcCCCCCc
Q psy17909 3 LGDTLF-VAGA----GKFFEGDGAFVTSPLSGDTLF---VAGAGKFFEGDGAEMHHNLNVKLAK-LPNETKVFCGHEYTV 73 (140)
Q Consensus 3 ~~~vi~-tPGH----~~~~~~~~~~~~~lFtGDtLf---~g~~Gr~~~gd~~~~~~Sl~~~l~~-lp~~t~i~PGHg~~~ 73 (140)
.+++++ +||| ++++.. +.+++|+||+++ .+.+|+.+++|..++++|+++ +.. +++...|+||||+..
T Consensus 135 ~i~~~~~~pgHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~-l~~~~~~~~~v~pgHg~~~ 210 (232)
T 1a7t_A 135 PLQCYYLGGGHATDNIVVWLP---TENILFGGCMLKDNQTTSIGNISDADVTAWPKTLDK-VKAKFPSARYVVPGHGNYG 210 (232)
T ss_dssp EEEEECCCCSSSTTCCEEEET---TTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHH-HHHHCTTCSEEEESSSCCB
T ss_pred EEEEEeCCCCCCCCCEEEEEC---CCCEEEEcCcccccCCcccccCCCCCHHHHHHHHHH-HHhhCCCCCEEECCCCCcc
Confidence 688997 9999 555553 368999999999 455677778899999999985 554 566679999999854
No 18
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.20 E-value=9.1e-11 Score=88.77 Aligned_cols=86 Identities=14% Similarity=0.065 Sum_probs=62.0
Q ss_pred eeEEEEE-eCCe----EEEEecccCCCCeeEEcceecCCC---ccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCc
Q psy17909 2 ALGDTLF-VAGA----GKFFEGDGAFVTSPLSGDTLFVAG---AGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTV 73 (140)
Q Consensus 2 ~~~~vi~-tPGH----~~~~~~~~~~~~~lFtGDtLf~g~---~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~ 73 (140)
..+++++ +||| ++++.. +.+++|+||+++.++ ++.++++|..++.+||++.+..+++...|+||||+..
T Consensus 124 ~~i~~~~~~pgHt~~~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~ 200 (223)
T 1m2x_A 124 SEFQVYYPGKGHTADNVVVWFP---KEKVLVGGCIIKSADSKDLGYIGEAYVNDWTQSVHNIQQKFSGAQYVVAGHDDWK 200 (223)
T ss_dssp EEEEEECCCSSSSSSCCEEEET---TTTEEEEETTSCCTTCSSCCCCTTCCHHHHHHHHHHHHHHTTTCSEEEESBSCCC
T ss_pred EEEEEEecCCCCCCCCEEEEEC---CCCEEEEecccccCcccccccCCCCCHHHHHHHHHHHHHhCCCCCEEEeCCCCcC
Confidence 3688997 9999 455543 368999999777642 3346778999999999853334666679999999853
Q ss_pred cccccccccCCCcHHHHHHHHHHHHHhh
Q psy17909 74 NNLYFSKHVEPNNTRIAEKLKWAIEKRE 101 (140)
Q Consensus 74 ~nl~fa~~~~~~n~~i~~~l~~~~~~~~ 101 (140)
+.+.+++..+++++.++
T Consensus 201 -----------~~~~l~~~~~~l~~~~~ 217 (223)
T 1m2x_A 201 -----------DQRSIQHTLDLINEYQQ 217 (223)
T ss_dssp -----------STTHHHHHHHHHHHHHH
T ss_pred -----------CHHHHHHHHHHHHHHHH
Confidence 23567777777766654
No 19
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.18 E-value=3.2e-11 Score=91.52 Aligned_cols=70 Identities=14% Similarity=0.041 Sum_probs=52.9
Q ss_pred eEEEE-EeCCe----EEEEecccCCCCeeEEcceecCCC---ccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCcc
Q psy17909 3 LGDTL-FVAGA----GKFFEGDGAFVTSPLSGDTLFVAG---AGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVN 74 (140)
Q Consensus 3 ~~~vi-~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~---~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~ 74 (140)
.++++ ++||| ++|+.. +.+++|+||+++... +|++++++..++.+||++.+..+++...|+||||+...
T Consensus 139 ~i~~~~~~pgHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~ 215 (227)
T 1mqo_A 139 KVETFYPGKGHTEDNIVVWLP---QYNILVGGCLVKSTSAKDLGNVADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGD 215 (227)
T ss_dssp EEEEECCCCSSSSSCCEEEET---TTTEEEEETTSCCTTCCSCCCCTTCCHHHHHHHHHHHHHHCCSCSEEEESSSCCBC
T ss_pred EEEEEecCCCCCCCCEEEEEC---CCCEEEEeeeeeccCccccCcCCCCCHHHHHHHHHHHHHhcCCCCEEEcCCCCccc
Confidence 56777 58999 555554 368999999998654 34567789999999998544446666799999999765
Q ss_pred c
Q psy17909 75 N 75 (140)
Q Consensus 75 n 75 (140)
|
T Consensus 216 ~ 216 (227)
T 1mqo_A 216 K 216 (227)
T ss_dssp T
T ss_pred c
Confidence 5
No 20
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.17 E-value=1.1e-10 Score=91.75 Aligned_cols=67 Identities=21% Similarity=0.286 Sum_probs=53.7
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCccc
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVNN 75 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~n 75 (140)
..+++++|||| ++|+.. +.+++||||++|.++.. ..+|..++++||+ ++..++.+ .++|||++...+
T Consensus 136 ~~~~~~~~pGHt~~~~~~~~~---~~~~lftGD~~~~~~~~--~~~~~~~~~~sl~-~l~~l~~~-~v~pgHg~~~~~ 206 (289)
T 4ad9_A 136 ATLRVLYTPGHTDDHMALLLE---EENAIFSGDCILGEGTT--VFEDLYDYMNSLK-ELLKIKAD-IIYPGHGPVIHN 206 (289)
T ss_dssp EEEEEEECCSSSTTCEEEEET---TTTEEEEETSSCSSSCC--CCSCHHHHHHHHH-HHHHHTCS-EEEESSSSCBSC
T ss_pred eEEEEEECCCCCCCCEEEEEc---CCCEEEEecccCCCCCc--CcCCHHHHHHHHH-HHHcCCCC-EEEeCCCChhcC
Confidence 36899999999 566654 36799999999976543 3368999999998 68889888 899999997654
No 21
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.16 E-value=5.9e-11 Score=89.61 Aligned_cols=80 Identities=14% Similarity=0.167 Sum_probs=61.5
Q ss_pred eEEEEEe-CCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcC------CCCeEEEcCCCC
Q psy17909 3 LGDTLFV-AGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKL------PNETKVFCGHEY 71 (140)
Q Consensus 3 ~~~vi~t-PGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~l------p~~t~i~PGHg~ 71 (140)
.++++++ ||| ++++.. +.+++| ||++|.+.+|+++.+|..++.+||+ ++..+ +. ..|+||||.
T Consensus 140 ~~~v~~~~pGHt~g~~~~~~~---~~~~lf-gD~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~~~~~~-~~i~pgHg~ 213 (233)
T 3q6v_A 140 SIRAMYLGEAHTKDGIFVYFP---AERVLY-GNCILKENLGNMSFANRTEYPKTLE-KLKGLIEQGELKV-DSIIAGHDT 213 (233)
T ss_dssp TEEEECCCCSSSSSCCEEEET---TTTEEE-CTTTSCSSCCCCTTCCTTHHHHHHH-HHHHHHHTTSSCC-SEEECSSSS
T ss_pred eEEEEECCCCCCcCcEEEEec---cCCEEE-CceeccccCCCCCcCCHHHHHHHHH-HHHHhhhcccCCC-eEEECCCCC
Confidence 4788999 999 555554 468999 9999999999888899999999998 57777 55 489999998
Q ss_pred CccccccccccCCCcHHHHHHHHHHHH
Q psy17909 72 TVNNLYFSKHVEPNNTRIAEKLKWAIE 98 (140)
Q Consensus 72 ~~~nl~fa~~~~~~n~~i~~~l~~~~~ 98 (140)
... +.+.++..++++++
T Consensus 214 ~~~----------~~~~i~~~~~~l~~ 230 (233)
T 3q6v_A 214 PIH----------DVGLIDHYLTLLEK 230 (233)
T ss_dssp SEE----------CTHHHHHHHHHHHH
T ss_pred ccC----------CHHHHHHHHHHHHh
Confidence 543 24556666555544
No 22
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.15 E-value=7.7e-11 Score=92.14 Aligned_cols=67 Identities=18% Similarity=0.130 Sum_probs=51.4
Q ss_pred EEE-EEeCCe----EEEEecccCCCCeeEEcceecCC---CccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCc
Q psy17909 4 GDT-LFVAGA----GKFFEGDGAFVTSPLSGDTLFVA---GAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTV 73 (140)
Q Consensus 4 ~~v-i~tPGH----~~~~~~~~~~~~~lFtGDtLf~g---~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~ 73 (140)
+++ +++||| ++|+.. +.+++|+||+++.+ .+|+.+.+|.+++.+|+++.+..+++.+.|+||||+..
T Consensus 169 ~~v~~~~pGHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~d~~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 243 (265)
T 2y8b_A 169 VEVFYPGAAHSGDNLVVYVP---AVRVLFGGCAVHEASRESAGNVADANLAEWPATIKRIQQRYPEAEVVIPGHGLPG 243 (265)
T ss_dssp EEEEECCSSSSTTCCEEEET---TTTEEEEETTSCCTTCCSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCB
T ss_pred EEEEecCCCCCCCCEEEEec---CCCEEEEccccccCCCcccCcCCcCCHHHHHHHHHHHHhhCCCCCEEECCCCCCC
Confidence 566 788988 566554 36899999999986 56666678999999999854444666779999999853
No 23
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.14 E-value=8.3e-11 Score=88.32 Aligned_cols=69 Identities=16% Similarity=-0.008 Sum_probs=52.8
Q ss_pred eeEEEEE-eCCe----EEEEecccCCCCeeEEcceecCCC---ccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCc
Q psy17909 2 ALGDTLF-VAGA----GKFFEGDGAFVTSPLSGDTLFVAG---AGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTV 73 (140)
Q Consensus 2 ~~~~vi~-tPGH----~~~~~~~~~~~~~lFtGDtLf~g~---~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~ 73 (140)
..+++++ +||| ++++.. +.+++|+||+++..+ ++.++.+|.+++.+|+++.+..+|+...|+||||+..
T Consensus 128 ~~i~~~~~~pgHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~ 204 (219)
T 3l6n_A 128 EEFVVDFLGEGHTADNVVVWFP---KYNVLDGGCLVKSNSATDLGYIKEANVEQWPKTINKLKAKYSKATLIIPGHDEWK 204 (219)
T ss_dssp EEEEEECCCCSSSSSCCEEEET---TTTEEEEETTSCCTTCSSCCCCTTCCTTTHHHHHHHHHHHCTTCSEEEESBSCCT
T ss_pred EEEEEEeCCCCCCCCCEEEEEC---CCCEEEECCeeeccccccccccCccCHHHHHHHHHHHHHhCCCCCEEECCCCCCC
Confidence 3588998 7999 455543 368999999998543 2336789999999999954444877789999999854
No 24
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.14 E-value=5.5e-11 Score=92.07 Aligned_cols=65 Identities=9% Similarity=0.108 Sum_probs=46.8
Q ss_pred eEEEEEeCCe----EEEEecccCCC---CeeEEcceecCCCccC-C-----CCCCHHHHHHHHHHHHhcCCCCeEEEcCC
Q psy17909 3 LGDTLFVAGA----GKFFEGDGAFV---TSPLSGDTLFVAGAGK-F-----FEGDGAEMHHNLNVKLAKLPNETKVFCGH 69 (140)
Q Consensus 3 ~~~vi~tPGH----~~~~~~~~~~~---~~lFtGDtLf~g~~Gr-~-----~~gd~~~~~~Sl~~~l~~lp~~t~i~PGH 69 (140)
++++++|||| ++|+....... +++|+||+.+.. +. + +.++..++.+||+ +|..++.++ ++|||
T Consensus 140 ~i~~i~~pGHt~g~~~~~~~~~~~~~~~~~lf~GD~~~~~--~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~~-i~pgH 215 (263)
T 1k07_A 140 VLTAHLTPGHTRGCTTWTMKLKDHGKQYQAVIIGSIGVNP--GYKLVDNITYPKIAEDYKHSIK-VLESMRCDI-FLGSH 215 (263)
T ss_dssp EEEEEECCSSSTTCEEEEEEEEETTEEEEEEEECCCCCCT--TCCCSSCSSCTTHHHHHHHHHH-HHHTBCCSE-EEESB
T ss_pred EEEEEECCCCCCCcEEEEEecccCCceeEEEEECCcccCC--CccccCCCcCcccHHHHHHHHH-HHHccCCCE-EEcCC
Confidence 5899999999 55544311012 599999986522 22 2 2467899999998 689999885 78999
Q ss_pred CC
Q psy17909 70 EY 71 (140)
Q Consensus 70 g~ 71 (140)
+.
T Consensus 216 g~ 217 (263)
T 1k07_A 216 AG 217 (263)
T ss_dssp HH
T ss_pred Cc
Confidence 98
No 25
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.13 E-value=1.9e-10 Score=86.27 Aligned_cols=65 Identities=15% Similarity=0.170 Sum_probs=51.1
Q ss_pred eEEEEEeC-Ce----EEEEecccCCCCeeEEcceecCCCccCC--C----CCCHHHHHHHHHHHHhcCCCCeEEEcCCCC
Q psy17909 3 LGDTLFVA-GA----GKFFEGDGAFVTSPLSGDTLFVAGAGKF--F----EGDGAEMHHNLNVKLAKLPNETKVFCGHEY 71 (140)
Q Consensus 3 ~~~vi~tP-GH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~--~----~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~ 71 (140)
.+++++|| || ++|+.. + +++|+||+++.++.|++ . .+|.+++.+|++ ++..+.+...|+||||.
T Consensus 109 ~~~~~~~p~gHt~g~~~~~~~---~-~~lf~GD~~~~~~~g~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~~~v~pgHg~ 183 (201)
T 2p97_A 109 GLKVMELQGSKTPGELALLLE---E-TTLITGDLVRAYRAGGLEILPDEKLMNKQKVVASVR-RLAALEKVEAVLVGDGW 183 (201)
T ss_dssp TEEEEEECSSSSTTEEEEEET---T-TEEEECSSEEBSSTTSCEECCGGGCSCHHHHHHHHH-HHHTCTTCCEEEESBBC
T ss_pred eEEEEECCCCCCCCcEEEEEc---C-CEEEECccccccCCCccccCCccccCCHHHHHHHHH-HHHhcCCCCEEEeCCCc
Confidence 47899999 99 566654 3 79999999999877762 1 379999999998 68884444589999995
Q ss_pred C
Q psy17909 72 T 72 (140)
Q Consensus 72 ~ 72 (140)
.
T Consensus 184 ~ 184 (201)
T 2p97_A 184 S 184 (201)
T ss_dssp C
T ss_pred c
Confidence 3
No 26
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.06 E-value=5.9e-10 Score=88.02 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=53.2
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceec--CCCccC---CCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLF--VAGAGK---FFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYT 72 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf--~g~~Gr---~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~ 72 (140)
.++++++|||| ++|+.. +.+++|+||+++ .+..+. .+.+|..++.+||+ ++..++.++.|+|||++.
T Consensus 151 ~~l~~i~~pGHt~g~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~-~l~~l~~~~~v~pgHg~~ 226 (303)
T 2vw8_A 151 HRLQVIEAHGHSDDHVVFYDV---RRRRLFCGDALGEFDEAEGVWRPLVFDDMEAYLESLE-RLQRLPTLLQLIPGHGGL 226 (303)
T ss_dssp EEEEEEECTTSSTTCEEEEET---TTTEEEEETTTCEECTTTCSEECCCSSCHHHHHHHHH-HHHTSSCCSEEEESSSCE
T ss_pred eEEEEEECCCCCcccEEEEEC---CCCEEEEcCccCcccCcccccCCCCCCCHHHHHHHHH-HHhcCCCCeEEECCCCCc
Confidence 46899999999 566554 368999999974 321232 23689999999998 688999888999999996
Q ss_pred cc
Q psy17909 73 VN 74 (140)
Q Consensus 73 ~~ 74 (140)
..
T Consensus 227 ~~ 228 (303)
T 2vw8_A 227 LR 228 (303)
T ss_dssp EE
T ss_pred cC
Confidence 54
No 27
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=98.99 E-value=2.2e-09 Score=83.59 Aligned_cols=86 Identities=12% Similarity=0.086 Sum_probs=59.4
Q ss_pred eeEEEEEeCC-e----EEEEecccCCCCeeEEcceecCCCccC-CC-------------------CCCHHHHHHHHHHHH
Q psy17909 2 ALGDTLFVAG-A----GKFFEGDGAFVTSPLSGDTLFVAGAGK-FF-------------------EGDGAEMHHNLNVKL 56 (140)
Q Consensus 2 ~~~~vi~tPG-H----~~~~~~~~~~~~~lFtGDtLf~g~~Gr-~~-------------------~gd~~~~~~Sl~~~l 56 (140)
.++++++||| | ++++.. +.++|||||++....+.. ++ +++..++.+||+ ++
T Consensus 144 ~~~~~i~tpg~Ht~g~~~~~~~---~~~~lfsGD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~-~l 219 (262)
T 3hnn_A 144 HVLKFLPIPSPRWPAGLCTYDV---QTQILYTDKIFGAHICGDDVFDDNWESFKEDQRYYFNCLMAPHAIHVEAALE-KI 219 (262)
T ss_dssp CEEEEEECCCSSCTTCEEEEET---TTTEEEEETTTCCCCCCSCCEESCGGGTHHHHHHHHHHHTGGGHHHHHHHHH-HH
T ss_pred cEEEEEECCCCCCCCeeEEEeC---CCCEEEEeecCccccCchhcccccHHHHHHHHHHHHHHHhhhhHHHHHHHHH-HH
Confidence 3689999999 8 556554 368999999843322221 21 234578899998 69
Q ss_pred hcCCCCeEEEcCCCCCccccccccccCCCcHHHHHHHHHHHHHh
Q psy17909 57 AKLPNETKVFCGHEYTVNNLYFSKHVEPNNTRIAEKLKWAIEKR 100 (140)
Q Consensus 57 ~~lp~~t~i~PGHg~~~~nl~fa~~~~~~n~~i~~~l~~~~~~~ 100 (140)
..|+.+ .|+||||+...+ .-.+.++++.+|++...
T Consensus 220 ~~L~~~-~i~PgHG~~~~~--------~~~~~~~~y~~w~~~~~ 254 (262)
T 3hnn_A 220 SDLQVR-LYAVGHGPLVRT--------SLIALTQAYADWSKAQK 254 (262)
T ss_dssp TTSCCS-EEEESSSSEEST--------THHHHHHHHHHHHHHHH
T ss_pred hCCCCC-EEECCCCccccC--------CHHHHHHHHHHHhcCcc
Confidence 999886 799999995431 12367888888876653
No 28
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=98.98 E-value=1.3e-10 Score=89.32 Aligned_cols=68 Identities=16% Similarity=0.213 Sum_probs=51.4
Q ss_pred EEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccC----CCCCCHHHHHHHHHHHHhcCCC--CeEEEcCCCCC
Q psy17909 4 GDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGK----FFEGDGAEMHHNLNVKLAKLPN--ETKVFCGHEYT 72 (140)
Q Consensus 4 ~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr----~~~gd~~~~~~Sl~~~l~~lp~--~t~i~PGHg~~ 72 (140)
++++++||| ++++.......+++||||+++.+..++ ++++|.+++.+|++ +|..++. ++.|+||||+.
T Consensus 165 i~~~~~pGHt~g~~~~~~~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~d~~~~~~sl~-~l~~l~~~~~~~v~pgHg~~ 242 (254)
T 3dha_A 165 VQLLYTPGHSPGHQSLFIETEQSGSVLLTIDASYTKENFEDEVPFAGFDPELALSSIK-RLKEVVKKEKPIIFFGHDIE 242 (254)
T ss_dssp EEEEECCSSSTTCEEEEEEETTTEEEEEEETTCSSHHHHHSCCCCSCSCHHHHHHHHH-HHHHHHHHHCCEEEESSCHH
T ss_pred EEEEECCCCCCCCEEEEEEeCCCCEEEEEecccchhhhcccCCCcCcCCHHHHHHHHH-HHHHHHHhcCCEEEeCCCHH
Confidence 688999999 455443211236999999999876554 45789999999998 6877753 45899999984
No 29
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=98.95 E-value=6.9e-10 Score=86.85 Aligned_cols=68 Identities=6% Similarity=-0.061 Sum_probs=51.6
Q ss_pred EEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccC--CCC---CCHHHHHHHHHHHHhc--CCCCeEEEcCCCCC
Q psy17909 4 GDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGK--FFE---GDGAEMHHNLNVKLAK--LPNETKVFCGHEYT 72 (140)
Q Consensus 4 ~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr--~~~---gd~~~~~~Sl~~~l~~--lp~~t~i~PGHg~~ 72 (140)
+++++|||| ++|+... .+..++||||++|.+++++ ++. .|..+..+|.++ ++. .+++++|+|||++.
T Consensus 177 i~~~~~pGHt~g~~~~~i~~-~~~~vlftGD~~~~~~~~~~d~~~~~d~d~~~~~~s~~~-ll~~~~~~~~~v~pgH~~~ 254 (280)
T 3esh_A 177 IKMQHSGGHSFGHTIITIES-QGDKAVHMGDIFPTTAHKNPLWVTAYDDYPMQSIREKER-MIPYFIQQQYWFLFYHDEN 254 (280)
T ss_dssp EEEEECCSSSTTCEEEEEEE-TTEEEEECGGGSCSGGGCSTTCCCTTCSCHHHHHHHHHH-HHHHHHHTTCEEECSSCSS
T ss_pred EEEEEcCCCCcccEEEEEEE-CCcEEEEEEccCCchhhcCCCccccccCCHHHHHHHHHH-HHHHHHhCCCEEEEEccCC
Confidence 788999999 4544421 2356999999999999988 433 478899999874 544 36889999999995
Q ss_pred c
Q psy17909 73 V 73 (140)
Q Consensus 73 ~ 73 (140)
.
T Consensus 255 ~ 255 (280)
T 3esh_A 255 Y 255 (280)
T ss_dssp E
T ss_pred C
Confidence 3
No 30
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=98.91 E-value=2.7e-09 Score=83.14 Aligned_cols=71 Identities=7% Similarity=-0.044 Sum_probs=50.6
Q ss_pred eeEEEEEeCCe----EEEEecccCCC----CeeEEcceecCCCc--cC-CCCCCHHHHHHHHHHHHhcCCCCeEEEcCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFV----TSPLSGDTLFVAGA--GK-FFEGDGAEMHHNLNVKLAKLPNETKVFCGHE 70 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~----~~lFtGDtLf~g~~--Gr-~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg 70 (140)
.++++++|||| ++|+.... +. +++|+||+++.+.. |+ ...++.+++.+|++ ++..++.++ |+||||
T Consensus 167 ~~i~~~~~pgHt~g~~~~~~~~~-~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~~-v~pgHg 243 (294)
T 3m8t_A 167 TTLTAHATPGHSPGCTSWEMTVK-DGKEDREVLFFCSGTVALNRLVGQPTYAGIVDDYRATFA-KAKAMKIDV-LLGPHP 243 (294)
T ss_dssp EEEEEEECCSSSTTCEEEEEEEE-ETTEEEEEEECCCCCCTTCCCSSSCSSTTHHHHHHHHHH-HHHHSCCSE-EECSSG
T ss_pred EEEEEEeCCCCCccCEEEEEEcc-CCCccceEEEEcCccCCCCcCcCCCCCCchHHHHHHHHH-HHHCCCCCE-EEcCCC
Confidence 35899999999 44443210 12 59999999876432 22 23456799999998 689999985 899999
Q ss_pred CCccc
Q psy17909 71 YTVNN 75 (140)
Q Consensus 71 ~~~~n 75 (140)
....+
T Consensus 244 ~~~~~ 248 (294)
T 3m8t_A 244 EVYGM 248 (294)
T ss_dssp GGTTH
T ss_pred Chhch
Confidence 96654
No 31
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=98.88 E-value=1.3e-08 Score=78.83 Aligned_cols=81 Identities=14% Similarity=0.075 Sum_probs=58.9
Q ss_pred eeEEEEEeCCe----EEEEecccCCC--CeeEEcceecCCCccCCCCC----CHHHHHHHHHHHHhcCCCCeEEEcCCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFV--TSPLSGDTLFVAGAGKFFEG----DGAEMHHNLNVKLAKLPNETKVFCGHEY 71 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~--~~lFtGDtLf~g~~Gr~~~g----d~~~~~~Sl~~~l~~lp~~t~i~PGHg~ 71 (140)
.++++++|||| ++|+....... ..+|+||++|.++++++..+ +.+++.+||+ ++..++.+ .++|||+.
T Consensus 150 ~~i~~~~~pGHt~g~~~~~~~~~~~~~~~~l~~gD~l~~~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~-~l~~~H~~ 227 (269)
T 1sml_A 150 IVFTAHFMAGHTPGSTAWTWTDTRNGKPVRIAYADSLSAPGYQLQGNPRYPHLIEDYRRSFA-TVRALPCD-VLLTPHPG 227 (269)
T ss_dssp EEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCTTCCCSSCTTCTTHHHHHHHHHH-HHHTSCCS-EEECSSGG
T ss_pred EEEEEEECCCCCcccEEEEEecccCCceeEEEEeccccCCCcccccCCCCCcCHHHHHHHHH-HHHcCCCC-EEEeCCCC
Confidence 35899999999 45543210011 26888999998887774333 3688999998 68899988 57999997
Q ss_pred CccccccccccCCC
Q psy17909 72 TVNNLYFSKHVEPN 85 (140)
Q Consensus 72 ~~~nl~fa~~~~~~ 85 (140)
. .+..|+..+.|.
T Consensus 228 ~-~~~~~~~~~~P~ 240 (269)
T 1sml_A 228 A-SNWDYAAGARAG 240 (269)
T ss_dssp G-GTCCGGGGGGTT
T ss_pred c-cchhhhhccCCC
Confidence 4 677888888775
No 32
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.75 E-value=3.8e-08 Score=76.67 Aligned_cols=70 Identities=13% Similarity=0.085 Sum_probs=51.5
Q ss_pred eeEEEEEeCCe----EEEEecccC--CCCeeEEcceecCCCccC--CCC-----CCHHHHHHHHHHHHhcCCCCeEEEcC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGA--FVTSPLSGDTLFVAGAGK--FFE-----GDGAEMHHNLNVKLAKLPNETKVFCG 68 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~--~~~~lFtGDtLf~g~~Gr--~~~-----gd~~~~~~Sl~~~l~~lp~~t~i~PG 68 (140)
..+++++|||| ++|+..... ..+.+|+||++|.+++++ +++ .+..++.+||+ ++..++++ .++||
T Consensus 172 ~~v~~~~~pgHt~g~~~~~~~~~~~~~~~~~l~gD~l~~~~~~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~-~vv~~ 249 (303)
T 4ax1_B 172 LALTAVASPGHTPGGTSWTWRSCEGDDCRQMVYADSLTAISDDVFRYSDDAAHPGYLAAFRNTLA-RVAALDCD-ILVTP 249 (303)
T ss_dssp EEEEEEECCSSSTTCEEEEEEEEETTEEEEEEECCCCCCCCCSSCCTTCGGGSTTHHHHHHHHHH-HHHTSCCS-EEECS
T ss_pred eEEEEEeCCCCCccceEEEEEecCCCceeEEEEeCCccccCcCcccCCCCCCCccHHHHHHHHHH-HHhcCCCC-EEEcC
Confidence 36899999999 455443110 113577799999999888 343 35799999998 69999998 68899
Q ss_pred CCCCc
Q psy17909 69 HEYTV 73 (140)
Q Consensus 69 Hg~~~ 73 (140)
|+...
T Consensus 250 Hg~~~ 254 (303)
T 4ax1_B 250 HPSAS 254 (303)
T ss_dssp SGGGG
T ss_pred Ccchh
Confidence 99853
No 33
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.73 E-value=1.5e-08 Score=82.51 Aligned_cols=68 Identities=7% Similarity=-0.132 Sum_probs=49.5
Q ss_pred eEEEEEeC-Ce----EEEEecccCCCCeeEEccee--cCCCccCCCC--------------------CCHHHHHHHHHHH
Q psy17909 3 LGDTLFVA-GA----GKFFEGDGAFVTSPLSGDTL--FVAGAGKFFE--------------------GDGAEMHHNLNVK 55 (140)
Q Consensus 3 ~~~vi~tP-GH----~~~~~~~~~~~~~lFtGDtL--f~g~~Gr~~~--------------------gd~~~~~~Sl~~~ 55 (140)
.+++++|| || ++++.. ..+++||||++ +..+++++.+ .+..++.+||+ +
T Consensus 141 ~i~~~~~p~gH~~~~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~-~ 216 (404)
T 2ohh_A 141 TLTFLETPLLHWPDSMFTLLD---EDGILFSNDAFGQHLCCPQRLDREIPEYILMDAARKFYANLITPLSKLVLKKFD-E 216 (404)
T ss_dssp EEEEEECTTSSSTTCEEEEEE---TTTEEECTTTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHH-H
T ss_pred EEEEEeCCCCCCCCceEEEEC---CCcEEEecCccccCcCcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 68999999 89 555543 36899999998 5555554322 11245678997 6
Q ss_pred HhcCCCC---eEEEcCCCCCcc
Q psy17909 56 LAKLPNE---TKVFCGHEYTVN 74 (140)
Q Consensus 56 l~~lp~~---t~i~PGHg~~~~ 74 (140)
|..|+.+ ..|+||||+...
T Consensus 217 l~~l~~~~~~~~i~pgHg~~~~ 238 (404)
T 2ohh_A 217 VKELGLLERIQMIAPSHGQIWT 238 (404)
T ss_dssp HHHTTCGGGCSEEECSSSCBBS
T ss_pred HhcCCCCccccEEecCCCcccc
Confidence 8899873 589999999776
No 34
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=98.64 E-value=1.1e-07 Score=83.81 Aligned_cols=67 Identities=10% Similarity=-0.026 Sum_probs=48.3
Q ss_pred eEEEEEeCCe-----EEEEecccCCCCeeEEcceecCCCccC--CC---CCCHHHHHHHHHHHHhcC---CCCeEEEcCC
Q psy17909 3 LGDTLFVAGA-----GKFFEGDGAFVTSPLSGDTLFVAGAGK--FF---EGDGAEMHHNLNVKLAKL---PNETKVFCGH 69 (140)
Q Consensus 3 ~~~vi~tPGH-----~~~~~~~~~~~~~lFtGDtLf~g~~Gr--~~---~gd~~~~~~Sl~~~l~~l---p~~t~i~PGH 69 (140)
.+++++|||| ++++.. +.++||+||+++.+.... +. ..|..++.+||++ +..+ +.+ .|+|||
T Consensus 270 ~l~vi~tPGHhTpg~i~~~~p---~~~vLftGD~v~~~~~~i~~~~g~~~~d~~~~~~sL~~-l~~l~~l~~~-~v~PGH 344 (658)
T 2cfu_A 270 PFTFQNTPGTESPAEMNIWLP---RQKALLMAENVVGTLHNLYTLRGAEVRDALGWSKYINQ-ALHRFGRQAE-VMFAVH 344 (658)
T ss_dssp EEEEEECTTSSSSSBEEEEET---TTTEEECTTTSCSSCCCSSCTTCCCCCCHHHHHHHHHH-HHHHTGGGCS-EEECSS
T ss_pred EEEEEeCCCCCCCCcEEEEEC---CCCEEEEeccccccCCccccCCCcccCCHHHHHHHHHH-HHHHhCCCCc-EEEeCC
Confidence 5899999998 566664 368999999998653221 22 2488899999984 5443 554 899999
Q ss_pred CCCcc
Q psy17909 70 EYTVN 74 (140)
Q Consensus 70 g~~~~ 74 (140)
+....
T Consensus 345 g~p~~ 349 (658)
T 2cfu_A 345 NWPRW 349 (658)
T ss_dssp SCCEE
T ss_pred CCccC
Confidence 98553
No 35
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=98.63 E-value=1.4e-08 Score=78.61 Aligned_cols=69 Identities=10% Similarity=0.029 Sum_probs=49.1
Q ss_pred eEEEEEeCCe----EEEEecccCCCCeeEEcceecCC-CccC--CC--CCCHHHHHHHHHHHHhcCCC--CeEEEcCCCC
Q psy17909 3 LGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVA-GAGK--FF--EGDGAEMHHNLNVKLAKLPN--ETKVFCGHEY 71 (140)
Q Consensus 3 ~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g-~~Gr--~~--~gd~~~~~~Sl~~~l~~lp~--~t~i~PGHg~ 71 (140)
.+++++|||| ++++.....+.+++|+||+++.. .+++ ++ ..|..++.+|++ ++..++. ++.|+|||++
T Consensus 176 ~~~v~~~pGHt~g~~~~~~~~~~~~~~lf~GD~~~~~~~~~~~~~~~~~~d~~~~~~sl~-~l~~l~~~~~~~i~pgH~~ 254 (274)
T 3aj3_A 176 GVKLISTPGHSIGHYSLLVEFPRRKPILFTIDAAYTQKSLETLCQAAFHIDPVAGVNSMR-KVKKLAEDHGAELMYSHDM 254 (274)
T ss_dssp TEEEEECTTSSTTCEEEEECCSSSCCEEEEETTCSSHHHHHHTCCCSCCSCHHHHHHHHH-HHHHHHHHHTCEEEESSCH
T ss_pred EEEEEECCCCCceeeEEEEECCCCCEEEEEechhhhHHHhcCCCCCceecCHHHHHHHHH-HHHHHHhcCCCEEEecCCH
Confidence 3789999999 55554321135899999988764 2332 33 378999999998 5777653 3589999998
Q ss_pred C
Q psy17909 72 T 72 (140)
Q Consensus 72 ~ 72 (140)
.
T Consensus 255 ~ 255 (274)
T 3aj3_A 255 D 255 (274)
T ss_dssp H
T ss_pred H
Confidence 3
No 36
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=98.55 E-value=1.1e-07 Score=72.74 Aligned_cols=65 Identities=15% Similarity=-0.028 Sum_probs=50.3
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccC-----CCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCC
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGK-----FFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYT 72 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr-----~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~ 72 (140)
.+++++++||| ++|+. .+++|+||+++....|. .+.++..++.+|++ ++..++.+ .++|||++.
T Consensus 138 ~~i~~~~~pGHt~~~~~~~~-----~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~sl~-~l~~l~~~-~v~~~H~~~ 210 (261)
T 3adr_A 138 YRMRLIYTPGHARHHMSVLV-----DDFLFTGDSAGAYFNGVVIPTTPPVIDYKMYMESLK-RQIELKPK-VVGFAHGGL 210 (261)
T ss_dssp SEEEEEECTTSCTTCEEEEE-----TTEEEEETSSCEEETTEEECCCCSCCCHHHHHHHHH-HHHHTCCS-EEEETTTEE
T ss_pred EEEEEEECCCCCCccEEEEE-----CCEEEEcCcccccccccccCCCCCCCCHHHHHHHHH-HHHcCCCC-EEEeCCCCc
Confidence 35899999999 55553 47999999987643221 24578999999998 68889888 699999985
Q ss_pred c
Q psy17909 73 V 73 (140)
Q Consensus 73 ~ 73 (140)
.
T Consensus 211 ~ 211 (261)
T 3adr_A 211 V 211 (261)
T ss_dssp E
T ss_pred c
Confidence 3
No 37
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=98.53 E-value=1.2e-08 Score=77.44 Aligned_cols=64 Identities=9% Similarity=-0.074 Sum_probs=45.1
Q ss_pred eEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCccCCCCCCHHHHHHH------HHHHHhcCCCCeEEEcCCCCC
Q psy17909 3 LGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGAGKFFEGDGAEMHHN------LNVKLAKLPNETKVFCGHEYT 72 (140)
Q Consensus 3 ~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr~~~gd~~~~~~S------l~~~l~~lp~~t~i~PGHg~~ 72 (140)
.+++++|||| ++|+.......+++||||+++..+. .+|.+++++| |+ + ..+ . ..|+|||++.
T Consensus 143 ~~~v~~~pGHt~g~~~~~~~~~~~~~vlftGD~~~~~~~----~~d~~~~~~s~~~~~~l~-~-~~l-~-~~i~pgHg~~ 214 (221)
T 1ztc_A 143 KVKVFHTPWHAREHLSFLLDTENAGRVLITGDITPNRLS----YYDIIKGYGSVQVKNFLD-R-VGR-I-DLLVFPHDAP 214 (221)
T ss_dssp TEEEEECCSSSTTCEEEEEEETTTEEEEECGGGSCSHHH----HHHHHHTCSCHHHHHHHH-H-HCC-C-SEEECSSSCC
T ss_pred eEEEEEcCCCCcccEEEEEEcCCCCeEEEEeCccccccc----CCCHHHHHhhhHhHHHHH-h-ccC-C-CEEEeCCCch
Confidence 4789999999 4554431100369999999875433 4577888888 88 4 667 3 4899999995
Q ss_pred cc
Q psy17909 73 VN 74 (140)
Q Consensus 73 ~~ 74 (140)
..
T Consensus 215 ~~ 216 (221)
T 1ztc_A 215 LK 216 (221)
T ss_dssp BC
T ss_pred Hh
Confidence 54
No 38
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.53 E-value=5.5e-07 Score=73.76 Aligned_cols=66 Identities=12% Similarity=-0.078 Sum_probs=46.0
Q ss_pred eEEEEEeC-Ce----EEEEecccCCCCeeEEcceecCCCccC-CCC---------------------CCHHHHHHHHHHH
Q psy17909 3 LGDTLFVA-GA----GKFFEGDGAFVTSPLSGDTLFVAGAGK-FFE---------------------GDGAEMHHNLNVK 55 (140)
Q Consensus 3 ~~~vi~tP-GH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr-~~~---------------------gd~~~~~~Sl~~~ 55 (140)
.+++++|| || ++++.. +.+++||||++...++.. ++. ....++.+||+ +
T Consensus 142 ~~~~~~~p~gHt~~~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~-~ 217 (414)
T 2q9u_A 142 TLKFIPVPLLHWPDSTFTYCP---EDKILFSNDGFGQHYATSRRWADECDVSHVMHLFKEYTANILGLFSAQMRKALE-V 217 (414)
T ss_dssp EEEEEECTTSSSTTCEEEEET---TTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTTTCHHHHHHHHH-H
T ss_pred EEEEEeCCCCCCCCceEEEEC---CCeEEEEccccccccCcccccccccchhhHHHHHHHHHHHheehHHHHHHHHHH-H
Confidence 68999999 99 555553 368999999543322221 221 23356678998 6
Q ss_pred HhcCCCCeEEEcCCCCCc
Q psy17909 56 LAKLPNETKVFCGHEYTV 73 (140)
Q Consensus 56 l~~lp~~t~i~PGHg~~~ 73 (140)
+..++.+ .|+||||...
T Consensus 218 l~~l~~~-~i~pgHg~~~ 234 (414)
T 2q9u_A 218 ASTVEIK-YILSAHGVSW 234 (414)
T ss_dssp HHTSCCS-EEEESSSCBE
T ss_pred HhCCCCC-EEECCCcCee
Confidence 8899887 8999999854
No 39
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.47 E-value=5.9e-07 Score=75.17 Aligned_cols=65 Identities=11% Similarity=-0.093 Sum_probs=45.2
Q ss_pred eeEEEEEeCC-e----EEEEecccCCCCeeEEcceecCCCccC-CCCCCH----------------------HHHHHHHH
Q psy17909 2 ALGDTLFVAG-A----GKFFEGDGAFVTSPLSGDTLFVAGAGK-FFEGDG----------------------AEMHHNLN 53 (140)
Q Consensus 2 ~~~~vi~tPG-H----~~~~~~~~~~~~~lFtGDtLf~g~~Gr-~~~gd~----------------------~~~~~Sl~ 53 (140)
.++++++||| | +|++. +++|||||.+..-.++. +...+. .++.++|+
T Consensus 152 ~~L~~i~tPg~H~p~~~~~y~-----~~iLFsgD~fg~h~~~~~~~d~~~~~~e~~~~~~~~yy~~i~~p~~~~v~~~L~ 226 (410)
T 4dik_A 152 KKFKFVMTPWLHWPDTMVTYL-----DGILFSCDVGGGYLLPEILDDSNESVVERYLPHVTKYIVTVIGHYKNYILEGAE 226 (410)
T ss_dssp EEEEEEECTTSSSTTCEEEEE-----TTEEEEETTTCCSSCCSSSBTTCHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHH
T ss_pred eEEEEecCCCCCCCCCeeEEe-----CCceEccccccccccCccccccchhhHHHHHHHHHHHHHhhccchHHHHHHHHH
Confidence 3689999999 6 56664 47999999755444444 332221 22346676
Q ss_pred HHHhcCCCCeEEEcCCCCCc
Q psy17909 54 VKLAKLPNETKVFCGHEYTV 73 (140)
Q Consensus 54 ~~l~~lp~~t~i~PGHg~~~ 73 (140)
++..|+.+ .|+||||+..
T Consensus 227 -kl~~Ldi~-~I~P~HGpi~ 244 (410)
T 4dik_A 227 -KLSSLKIK-ALLPGHGLIW 244 (410)
T ss_dssp -HHHTSCCS-EEEESSSCBB
T ss_pred -HHhCCCCC-EEecCCcchh
Confidence 68899988 7999999965
No 40
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=97.80 E-value=2.7e-08 Score=88.00 Aligned_cols=67 Identities=9% Similarity=-0.060 Sum_probs=49.5
Q ss_pred eEEEEEeCC-e----EEEEecccCCCCeeEEcceecCCCccC---CC---CCCHHHHHHHHHHHHhcC---CCCeEEEcC
Q psy17909 3 LGDTLFVAG-A----GKFFEGDGAFVTSPLSGDTLFVAGAGK---FF---EGDGAEMHHNLNVKLAKL---PNETKVFCG 68 (140)
Q Consensus 3 ~~~vi~tPG-H----~~~~~~~~~~~~~lFtGDtLf~g~~Gr---~~---~gd~~~~~~Sl~~~l~~l---p~~t~i~PG 68 (140)
.+++++||| | ++++.. +.++||+||++|.+. .+ +. .+|..++++||+ ++..+ +. ..|+||
T Consensus 281 ~l~vi~tPG~Htpg~i~~~~p---~~~vLftGD~~~~~~-~ni~~~~g~~~~d~~~w~~SL~-~l~~l~~~~~-~~vvPG 354 (668)
T 2yhe_A 281 ELEFQLTLGSEAPSDMNIYLP---QFKVLNTADNAPPAM-HNLLTPRGAEVRDAKAWAGYID-ASLEKYGDRT-DVLIQQ 354 (668)
Confidence 578999999 8 566553 368999999998643 33 22 258899999998 57776 44 489999
Q ss_pred CCCCccc
Q psy17909 69 HEYTVNN 75 (140)
Q Consensus 69 Hg~~~~n 75 (140)
|++...+
T Consensus 355 Hg~p~~g 361 (668)
T 2yhe_A 355 HNWPVWG 361 (668)
Confidence 9976644
No 41
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=98.40 E-value=1.5e-07 Score=75.81 Aligned_cols=68 Identities=15% Similarity=0.114 Sum_probs=49.2
Q ss_pred EEEEEeCCe----EEEEecccCCCCeeEEcceecCCC--ccC--C---CCCCHHHHHHHHHHHHhcC-CCCeEEEcCCCC
Q psy17909 4 GDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAG--AGK--F---FEGDGAEMHHNLNVKLAKL-PNETKVFCGHEY 71 (140)
Q Consensus 4 ~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~--~Gr--~---~~gd~~~~~~Sl~~~l~~l-p~~t~i~PGHg~ 71 (140)
+++++|||| ++|+... .+.+++|+||+++... +++ + +.+|..++++|+++.+..+ +++++|+|||++
T Consensus 226 i~vi~tpGHtpG~~~~~i~~-~~~~vlf~GD~~~~~~~~~~~p~~~~~~d~d~~~~~~s~~~ll~~~~~~~~~v~~~H~~ 304 (331)
T 1p9e_A 226 IKALASHGHTPGHTTYVVES-QGQKLALLGDLILVAAVQFDDPSVTTQLDSDSKSVAVERKKAFADAAKGGYLIAASHLS 304 (331)
T ss_dssp EEEEECTTSSTTCEEEEEEE-TTEEEEECTTSCCCHHHHTTCTTCCBTTCSSHHHHHHHHHHHHHHHHHHTCEEECTTSS
T ss_pred EEEEEcCCCChhCEEEEEEE-CCcEEEEEECccCcchhcccCCCceecccCCHHHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 788999999 4554421 1357999999998752 333 2 4579999999998644444 667899999997
Q ss_pred C
Q psy17909 72 T 72 (140)
Q Consensus 72 ~ 72 (140)
.
T Consensus 305 ~ 305 (331)
T 1p9e_A 305 F 305 (331)
T ss_dssp T
T ss_pred C
Confidence 3
No 42
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.36 E-value=1.1e-06 Score=71.28 Aligned_cols=68 Identities=13% Similarity=-0.011 Sum_probs=45.2
Q ss_pred eeEEEEEeC-Ce----EEEEecccCCCCeeEEcceecCCCccC-CCCC--C-------------------HHHHHHHHHH
Q psy17909 2 ALGDTLFVA-GA----GKFFEGDGAFVTSPLSGDTLFVAGAGK-FFEG--D-------------------GAEMHHNLNV 54 (140)
Q Consensus 2 ~~~~vi~tP-GH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr-~~~g--d-------------------~~~~~~Sl~~ 54 (140)
.++++++|| || ++++.. +.+++||||++...+... .+.+ + ..++.++++
T Consensus 136 ~~~~~~~~p~gH~~~~~~~~~~---~~~~lf~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~l~- 211 (398)
T 1ycg_A 136 RSLTFIEAPMLHWPDSMFTYVP---EEALLLPNDAFGQHIATSVRFDDQVDAGLIMDEAAKYYANILMPFSNLITKKLD- 211 (398)
T ss_dssp CEEEEEECTTSSSTTCEEEEET---TTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHH-
T ss_pred cEEEEEeCCCCCCCCcEEEEEC---CCcEEEeccccccccCccccccccccHHHHHHHHHHHHHHhhhhhHHHHHHHHH-
Confidence 368999999 89 555543 368999999854333222 2222 1 133357777
Q ss_pred HHhc--CCCCeEEEcCCCCCcc
Q psy17909 55 KLAK--LPNETKVFCGHEYTVN 74 (140)
Q Consensus 55 ~l~~--lp~~t~i~PGHg~~~~ 74 (140)
+|.. ++.+ .|+||||+...
T Consensus 212 ~l~~~~l~~~-~i~p~Hg~~~~ 232 (398)
T 1ycg_A 212 EIQKINLAIK-TIAPSHGIIWR 232 (398)
T ss_dssp HHHHTTCCCS-EEEESSSCBBC
T ss_pred HHhhCCCCcc-EEECCCchhhh
Confidence 6888 9885 89999998654
No 43
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.36 E-value=1.5e-06 Score=70.49 Aligned_cols=67 Identities=9% Similarity=-0.100 Sum_probs=44.7
Q ss_pred eEEEEEeC-Ce----EEEEecccCCCCeeEEcceecCCCccC--CCC-------------------CCH-HHHHHHHHHH
Q psy17909 3 LGDTLFVA-GA----GKFFEGDGAFVTSPLSGDTLFVAGAGK--FFE-------------------GDG-AEMHHNLNVK 55 (140)
Q Consensus 3 ~~~vi~tP-GH----~~~~~~~~~~~~~lFtGDtLf~g~~Gr--~~~-------------------gd~-~~~~~Sl~~~ 55 (140)
++++++|| || ++++.. ..+++||||++...+... +++ ++. .++.++++ +
T Consensus 136 ~~~~~~~p~gH~~~~~~~~~~---~~~~l~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 211 (402)
T 1e5d_A 136 TVTFYETRMLHWPDSMVSWFA---DEKVLISNDIFGQNIAASERFSDQIPVHTLERAMREYYANIVNPYAPQTLKAIE-T 211 (402)
T ss_dssp EEEEEECTTSSSTTCEEEEET---TTTEEEEETTTCCCCCCSCCBGGGSCHHHHHHHHHHHHHHHTGGGHHHHHHHHH-H
T ss_pred EEEEEeCCCCCCCCcEEEEEC---CCCEEEecccccCccccccccccccchhHHHHHHHHHHHHhhhhhHHHHHHHHH-H
Confidence 58999999 89 555553 468999999854332211 322 222 33356776 6
Q ss_pred Hhc--CCCCeEEEcCCCCCcc
Q psy17909 56 LAK--LPNETKVFCGHEYTVN 74 (140)
Q Consensus 56 l~~--lp~~t~i~PGHg~~~~ 74 (140)
+.. ++. .+|+||||....
T Consensus 212 l~~~~l~~-~~i~p~Hg~~~~ 231 (402)
T 1e5d_A 212 LVGAGVAP-EFICPDHGVIFR 231 (402)
T ss_dssp HHHTTCCC-SEEEESSSCBEE
T ss_pred HHhCCCCc-CEEecCCcceee
Confidence 888 887 489999998654
No 44
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=98.25 E-value=1e-06 Score=67.91 Aligned_cols=67 Identities=15% Similarity=0.085 Sum_probs=46.9
Q ss_pred EEEEEe-CCe----EEEEecccCCCCeeEEcceecCCC-ccC-----CCCCCHHHHHHHHHHHHhcCC--CCeEEEcCCC
Q psy17909 4 GDTLFV-AGA----GKFFEGDGAFVTSPLSGDTLFVAG-AGK-----FFEGDGAEMHHNLNVKLAKLP--NETKVFCGHE 70 (140)
Q Consensus 4 ~~vi~t-PGH----~~~~~~~~~~~~~lFtGDtLf~g~-~Gr-----~~~gd~~~~~~Sl~~~l~~lp--~~t~i~PGHg 70 (140)
++++++ ||| ++|+.......+++|+||+++... ++. ....|..++.+|++ ++..+. +...|+|||+
T Consensus 182 ~~v~~~~pgHt~g~~~~~~~~~~~~~vl~~GD~~~~~~~~~~~~~~~~~~~d~~~~~~sl~-~l~~l~~~~~~~v~~~H~ 260 (276)
T 2r2d_A 182 VNLLNFGTGHASGMLGLAVRLEKQPGFLLVSDACYTATNYGPPARRAGVLHDTIGYDRTVS-HIRQYAESRSLTVLFGHD 260 (276)
T ss_dssp EEEEEEESSSSSSEEEEEEECSSSCEEEEEETTSCCHHHHSSSCCCCSSCSCHHHHHHHHH-HHHHHHHHTTCEEEESSC
T ss_pred EEEEeCCCCCCceeEEEEEEcCCCceEEEEechhhhHHHhcccCCCCccccCHHHHHHHHH-HHHHHHhcCCCEEEeCCC
Confidence 688899 999 455443211157999999988752 332 12468899999998 577773 3458999998
Q ss_pred C
Q psy17909 71 Y 71 (140)
Q Consensus 71 ~ 71 (140)
+
T Consensus 261 ~ 261 (276)
T 2r2d_A 261 R 261 (276)
T ss_dssp H
T ss_pred H
Confidence 7
No 45
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=88.96 E-value=0.24 Score=42.38 Aligned_cols=35 Identities=11% Similarity=-0.054 Sum_probs=23.2
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceecCCCc
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLFVAGA 37 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf~g~~ 37 (140)
.+++++++|+| ++|+... +...++||||+.+.+..
T Consensus 148 ~~v~~~~~~H~~~gs~~~~i~~-~~~~il~tGD~~~~~~~ 186 (562)
T 3bk2_A 148 FTLDLFRMTHSIPDNSGVVIRT-PIGTIVHTGDFKLDPTP 186 (562)
T ss_dssp EEEEEEECCCSSSSCEEEEEEE-TTEEEEECCSCCCCSSC
T ss_pred EEEEEEECCCCCcccEEEEEEE-CCeEEEEcCCCCCCCCC
Confidence 46888888877 3333211 13579999999886553
No 46
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=78.49 E-value=1.4 Score=33.07 Aligned_cols=32 Identities=9% Similarity=-0.132 Sum_probs=19.9
Q ss_pred eEEEEEeC---CeEEEEecccCCCCeeEEcceecCC
Q psy17909 3 LGDTLFVA---GAGKFFEGDGAFVTSPLSGDTLFVA 35 (140)
Q Consensus 3 ~~~vi~tP---GH~~~~~~~~~~~~~lFtGDtLf~g 35 (140)
+++++++| |+++|+... ....++|+||+.+..
T Consensus 150 ~v~~~~~~H~~~~~~~~i~~-~~~~i~~~GD~~~~~ 184 (268)
T 1zkp_A 150 SISFLKTVHPVTCFAMRITA-GNDIVVYSADSSYIP 184 (268)
T ss_dssp EEEEEECCSSSCCEEEEEEE-TTEEEEECCSCCCCT
T ss_pred EEEEEECCCCCCceEEEEEE-CCeEEEEeCCCCCCH
Confidence 56777766 334444321 134799999998754
No 47
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=72.00 E-value=2.6 Score=36.03 Aligned_cols=33 Identities=9% Similarity=-0.148 Sum_probs=22.0
Q ss_pred eeEEEEEeCCe----E-EEEecccCCCCeeEEcceecCCC
Q psy17909 2 ALGDTLFVAGA----G-KFFEGDGAFVTSPLSGDTLFVAG 36 (140)
Q Consensus 2 ~~~~vi~tPGH----~-~~~~~~~~~~~~lFtGDtLf~g~ 36 (140)
.+++++++|+| + +++.. +...++||||+.|.+.
T Consensus 133 ~~v~~~~~~H~~pgs~~~~i~~--~~~~il~tGD~~~~~~ 170 (555)
T 3zq4_A 133 TAVSFFRTTHSIPDSYGIVVKT--PPGNIVHTGDFKFDFT 170 (555)
T ss_dssp EEEEEEEEBCSSSSEEEEEEEE--TTEEEEECCSCBCCSS
T ss_pred EEEEEEeCCCCCcCcEEEEEEE--CCcEEEEeCCCCCCCC
Confidence 35778888877 3 33332 2357999999988643
No 48
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=70.01 E-value=3.8 Score=33.21 Aligned_cols=15 Identities=13% Similarity=-0.077 Sum_probs=11.7
Q ss_pred CeeEEcceecCCCcc
Q psy17909 24 TSPLSGDTLFVAGAG 38 (140)
Q Consensus 24 ~~lFtGDtLf~g~~G 38 (140)
.++||||+.+.....
T Consensus 136 ~il~tGD~~~~~~~~ 150 (367)
T 4b87_A 136 VILHTGDFRADPSME 150 (367)
T ss_dssp EEEECCSCCCCGGGG
T ss_pred EEEEecCcccCcccc
Confidence 499999998876543
No 49
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=69.04 E-value=5.2 Score=29.91 Aligned_cols=30 Identities=13% Similarity=-0.098 Sum_probs=18.9
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceec
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLF 33 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf 33 (140)
.+++++++| | +.|+... .+..++|+||+-+
T Consensus 134 ~~v~~~~~~-H~~~~~g~~i~~-~~~~i~~~GDt~~ 167 (258)
T 3g1p_A 134 LQVTPLPLN-HSKLTFGYLLET-AHSRVAWLSDTAG 167 (258)
T ss_dssp EEEEEEECC-SSSCCEEEEEEC-SSCEEEEECSCSS
T ss_pred EEEEEEECC-CCCCceEEEEEe-CCcEEEEECCCCC
Confidence 357777777 7 4443321 2356999999854
No 50
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=64.85 E-value=30 Score=29.77 Aligned_cols=23 Identities=17% Similarity=-0.067 Sum_probs=14.1
Q ss_pred EeCCe----EEEEecccCCC--CeeEEcce
Q psy17909 8 FVAGA----GKFFEGDGAFV--TSPLSGDT 31 (140)
Q Consensus 8 ~tPGH----~~~~~~~~~~~--~~lFtGDt 31 (140)
+.||| ++++... ++. .++||||+
T Consensus 325 ~~~gH~~Gs~~~~i~~-~~~~~~ilftGD~ 353 (636)
T 2ycb_A 325 HNAGHILGSAMAHLHI-GDGQHNMVYTGDF 353 (636)
T ss_dssp EECCSSTTCEEEEEEE-TTTTTCEEECCSC
T ss_pred eCCCCCCCcEEEEEEE-CCCeEEEEEECCC
Confidence 46777 3433321 124 79999998
No 51
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=48.87 E-value=13 Score=29.81 Aligned_cols=33 Identities=12% Similarity=0.004 Sum_probs=19.0
Q ss_pred eEEEEE----eCCeEEEEecccCCCCeeEEcceecCCC
Q psy17909 3 LGDTLF----VAGAGKFFEGDGAFVTSPLSGDTLFVAG 36 (140)
Q Consensus 3 ~~~vi~----tPGH~~~~~~~~~~~~~lFtGDtLf~g~ 36 (140)
++++++ +||+++|.... +...++||||+.+.+.
T Consensus 159 ~v~~~~~~H~~~gs~~~~i~~-~~~~i~~tGD~~~~~~ 195 (429)
T 2az4_A 159 SVEIVPVDHDAYGASALLIRT-PDHFITYTGDLRLHGH 195 (429)
T ss_dssp EEEEEECCCSSTTCEEEEEEE-TTEEEEECCSCCSSST
T ss_pred EEEEEECCCCChhhEEEEEEe-CCcEEEECCCcccCCC
Confidence 455555 44554443221 1346999999987543
No 52
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=47.87 E-value=9.8 Score=31.11 Aligned_cols=12 Identities=25% Similarity=0.083 Sum_probs=9.8
Q ss_pred CCeeEEcceecC
Q psy17909 23 VTSPLSGDTLFV 34 (140)
Q Consensus 23 ~~~lFtGDtLf~ 34 (140)
..++||||+.+.
T Consensus 172 ~~il~sGD~~~~ 183 (459)
T 2i7t_A 172 VKLLYTGDFSRQ 183 (459)
T ss_dssp EEEEECCSCCCC
T ss_pred cEEEEeCCCCCC
Confidence 479999998764
No 53
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=47.54 E-value=18 Score=28.31 Aligned_cols=44 Identities=18% Similarity=0.268 Sum_probs=30.1
Q ss_pred EcceecCC----CccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCcc
Q psy17909 28 SGDTLFVA----GAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVN 74 (140)
Q Consensus 28 tGDtLf~g----~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~ 74 (140)
-||+|+.. ++| ...|.++.+++.|.+.+. ++-|+|+|.|.+...
T Consensus 29 ~Gd~llVHsSl~~lG-~v~gg~~~vi~AL~~~vg--~~GTLvmPtft~~~~ 76 (273)
T 2nyg_A 29 KGMTVLVHSSLSSIG-WVNGGAVAVIQALIDVVT--EEGTIVMPSQSVELS 76 (273)
T ss_dssp TTCEEEEEECSGGGC-CBTTHHHHHHHHHHHHHT--TTSEEEEECCCTTSS
T ss_pred CCCEEEEEechHHhC-CCCCCHHHHHHHHHHHhC--CCCeEEEeccccccC
Confidence 46776653 244 334568999999886442 567999999988543
No 54
>4fc9_B Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, all-helical bilobal; HET: MSE; 1.80A {Xanthomonas campestris PV}
Probab=47.23 E-value=1.5 Score=32.52 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=26.4
Q ss_pred CCCCccccccccccCCCcHHHHHHHHHHHHHhhcCCCCCCccHHHHHHcCCcceec---cccceeec
Q psy17909 69 HEYTVNNLYFSKHVEPNNTRIAEKLKWAIEKRERKEPTVPSTIGMVMVMGTVMGMV---MVVGMVTD 132 (140)
Q Consensus 69 Hg~~~~nl~fa~~~~~~n~~i~~~l~~~~~~~~~~~~~~~stl~~E~~~Npflr~~---~~~~~~~~ 132 (140)
|..+..||.|..+..-....+...++.+++....- -|++-+|. .|||+... ..+-|+.+
T Consensus 10 ~~~~~~~~~~~~s~~~te~~~~~AlerIedta~Am----ls~vIDee-RNPFlegAPsylPeKRp~g 71 (208)
T 4fc9_B 10 HSSGRENLYFQGSATASELLLTAALERIEDTAQAM----LSTVIDEE-RNPFLEGAPSYLPGKRPTD 71 (208)
T ss_dssp ------CCSCCCCCCCCCSSCCHHHHHHHHHHHHH----HHHHHTSC-BCTTSTTCCBCSTTTSBTT
T ss_pred ccccccceeeeccccccchhHHHHHHHHHHHHHHH----HHHHhccc-cCchhcCCCccCcCCCCCC
Confidence 56667888888776433333333333333322211 34555543 49998764 34444444
No 55
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=46.10 E-value=16 Score=28.57 Aligned_cols=43 Identities=16% Similarity=0.258 Sum_probs=29.8
Q ss_pred EcceecCC----CccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCc
Q psy17909 28 SGDTLFVA----GAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTV 73 (140)
Q Consensus 28 tGDtLf~g----~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~ 73 (140)
-||+|+.. ++| ...|.++.+++.|.+.+. |+-|+|+|.|-+..
T Consensus 31 ~Gd~llVHsSl~~lG-~v~gg~~~vi~AL~~~vg--~~GTLvmPt~t~~~ 77 (268)
T 3ijw_A 31 KGMTVIVHSSLSSIG-WISGGAVAVVEALMEVIT--EEGTIIMPTQSSDL 77 (268)
T ss_dssp TTCEEEEEECTGGGC-CBTTHHHHHHHHHHHHHC--TTSEEEEECCCGGG
T ss_pred CCCEEEEEechHHhC-CCCCCHHHHHHHHHHHhC--CCCeEEEecccccc
Confidence 36666653 234 335678999999986443 67899999998743
No 56
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=45.63 E-value=13 Score=32.13 Aligned_cols=27 Identities=15% Similarity=-0.060 Sum_probs=15.8
Q ss_pred eEEEEEeCCe----EEEEecccCCC--CeeEEcce
Q psy17909 3 LGDTLFVAGA----GKFFEGDGAFV--TSPLSGDT 31 (140)
Q Consensus 3 ~~~vi~tPGH----~~~~~~~~~~~--~~lFtGDt 31 (140)
++++ +.||| ++|+... ++. .++||||+
T Consensus 336 ~v~~-~~~gH~~Gs~~~~i~~-~~~~~~ilftGD~ 368 (651)
T 3af5_A 336 RLTL-HNAGHILGSAIVHLHI-GNGLHNIAITGDF 368 (651)
T ss_dssp EEEE-EECSSSTTCEEEEEEE-TTTTTCEEECCSC
T ss_pred EEEE-ecCCCCcCcEEEEEEE-CCCceEEEEeCCC
Confidence 3444 55677 3333321 124 79999999
No 57
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=44.55 E-value=12 Score=32.30 Aligned_cols=27 Identities=15% Similarity=-0.159 Sum_probs=15.8
Q ss_pred eEEEEEeCCe----EEEEecccCCC--CeeEEcce
Q psy17909 3 LGDTLFVAGA----GKFFEGDGAFV--TSPLSGDT 31 (140)
Q Consensus 3 ~~~vi~tPGH----~~~~~~~~~~~--~~lFtGDt 31 (140)
++++ +.||| ++++... ++. .++||||+
T Consensus 324 ~v~~-~~~GH~~Gs~~~~i~~-~~~~~~ilftGD~ 356 (640)
T 2xr1_A 324 KLTF-HNAGHILGSAISHFHI-GDGLHNVVFTGDY 356 (640)
T ss_dssp EEEE-EECSSSTTCEEEEEEE-TTTTEEEEECCSC
T ss_pred EEEE-EcCCCCcCcEEEEEEE-CCceEEEEEECCC
Confidence 3444 56777 3333321 134 79999998
No 58
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=42.72 E-value=17 Score=28.76 Aligned_cols=44 Identities=18% Similarity=0.175 Sum_probs=30.1
Q ss_pred EcceecCC----CccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCCCCcc
Q psy17909 28 SGDTLFVA----GAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHEYTVN 74 (140)
Q Consensus 28 tGDtLf~g----~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg~~~~ 74 (140)
-||+|+.. ++|.+ .|.++.+++.|...+. ++-|+|+|.|.+...
T Consensus 38 ~Gd~llVHsSL~~lG~v-~Gga~~vi~AL~~~vg--~~GTLvmPt~t~~~~ 85 (286)
T 3sma_A 38 PGGVLLVHASLSALGWV-CGGAQAVVLALQDAVG--KEGTLVMPTFSGDLS 85 (286)
T ss_dssp TTCEEEEEECSTTSCEE-TTHHHHHHHHHHHHHC--TTCEEEEECCCTTSS
T ss_pred CCCEEEEEechHHhCCC-CCCHHHHHHHHHHHhc--CCCEEEEeccCcccC
Confidence 46776653 33433 4568999999885433 678999999988543
No 59
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=37.35 E-value=33 Score=28.51 Aligned_cols=49 Identities=20% Similarity=0.112 Sum_probs=26.9
Q ss_pred CCeeEEcceecCCCccCCCCCCHHHHHHHHHHHHhcCCCCeEEEcCCC-C-CccccccccccCC
Q psy17909 23 VTSPLSGDTLFVAGAGKFFEGDGAEMHHNLNVKLAKLPNETKVFCGHE-Y-TVNNLYFSKHVEP 84 (140)
Q Consensus 23 ~~~lFtGDtLf~g~~Gr~~~gd~~~~~~Sl~~~l~~lp~~t~i~PGHg-~-~~~nl~fa~~~~~ 84 (140)
..+||+||+-.. ...++. +... .++.++++.|-|| . ......|...+.|
T Consensus 196 ~~iLftGD~~~~--------~~~e~~---l~~~--~~~~DvLkv~HHG~S~~s~s~~fl~~v~P 246 (547)
T 2bib_A 196 KKIYLGGDLDNV--------HGAEDK---YGPL--IGKVDLMKFNHHHDTNKSNTKDFIKNLSP 246 (547)
T ss_dssp EEEEECTTCCST--------TSHHHH---HHHH--HCCCSEEECTTTTBCSSSSCHHHHHHHCC
T ss_pred EEEEecCCccch--------hhhhhh---hccc--ccceeEEEeccccCcccCChHHHHHhcCC
Confidence 468999997432 122222 2221 2467888888897 2 3444455544444
No 60
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=36.35 E-value=21 Score=29.15 Aligned_cols=27 Identities=19% Similarity=0.006 Sum_probs=15.3
Q ss_pred EeCCeEEEEecccCCCCeeEEcceecCC
Q psy17909 8 FVAGAGKFFEGDGAFVTSPLSGDTLFVA 35 (140)
Q Consensus 8 ~tPGH~~~~~~~~~~~~~lFtGDtLf~g 35 (140)
|+||+++|+... ....++||||+-+..
T Consensus 141 H~~Gs~~~~i~~-~~~~ilfsGD~~~~~ 167 (431)
T 3iek_A 141 HLPGSAFVVAQG-EGRTLVYSGDLGNRE 167 (431)
T ss_dssp SSTTCEEEEEEE-TTEEEEECCCCCCTT
T ss_pred CCcCceEEEEEE-CCEEEEEeCCCCCCC
Confidence 444444443321 234699999986643
No 61
>3jyw_S 60S ribosomal protein L24(A); eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=34.51 E-value=8.3 Score=22.26 Aligned_cols=8 Identities=25% Similarity=0.534 Sum_probs=6.9
Q ss_pred EEEcCCCC
Q psy17909 64 KVFCGHEY 71 (140)
Q Consensus 64 ~i~PGHg~ 71 (140)
.||||||-
T Consensus 5 ~IyPG~G~ 12 (45)
T 3jyw_S 5 KIYPGRGT 12 (45)
T ss_dssp CCCTTCCC
T ss_pred cccCCCCe
Confidence 58999996
No 62
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=33.32 E-value=26 Score=30.85 Aligned_cols=28 Identities=7% Similarity=-0.245 Sum_probs=15.8
Q ss_pred eEEEEEeCCe----EEEEecccCCCCeeEEccee
Q psy17909 3 LGDTLFVAGA----GKFFEGDGAFVTSPLSGDTL 32 (140)
Q Consensus 3 ~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtL 32 (140)
+++++ .||| ++|.... ....++||||+-
T Consensus 150 ~V~~~-~aGHs~Gs~~~~I~~-~~~~IvytGD~~ 181 (717)
T 2i7x_A 150 TLLAY-NAGVCPGGSIWCIST-YSEKLVYAKRWN 181 (717)
T ss_dssp EEEEE-ECSSSTTCEEEEEEC-SSCEEEECSSCC
T ss_pred EEEEE-CCCCCCCcEEEEEEe-CCCEEEEECCCC
Confidence 34443 4666 4443321 246799999963
No 63
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=31.38 E-value=24 Score=28.08 Aligned_cols=12 Identities=25% Similarity=0.241 Sum_probs=9.5
Q ss_pred CCeeEEcceecC
Q psy17909 23 VTSPLSGDTLFV 34 (140)
Q Consensus 23 ~~~lFtGDtLf~ 34 (140)
..++||||+-+.
T Consensus 114 ~~i~~tGD~~~~ 125 (336)
T 3zdk_A 114 GTILYTGDFRYT 125 (336)
T ss_dssp EEEEECCSCCCC
T ss_pred ceEEEeCCCCCC
Confidence 569999998654
No 64
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=29.05 E-value=42 Score=25.34 Aligned_cols=27 Identities=7% Similarity=-0.221 Sum_probs=18.0
Q ss_pred eeEEEEEeCCe----EEEEecccCCCCeeEEcceec
Q psy17909 2 ALGDTLFVAGA----GKFFEGDGAFVTSPLSGDTLF 33 (140)
Q Consensus 2 ~~~~vi~tPGH----~~~~~~~~~~~~~lFtGDtLf 33 (140)
.+++++++|.| +.|.. ..++|+||+-+
T Consensus 182 ~~v~~~~~~H~~~~~~g~~i-----~~~~y~gDt~~ 212 (293)
T 3md7_A 182 IRFEPFSQVHGDIESLGFRI-----GSVVYCTDVSA 212 (293)
T ss_dssp EEEEEEEEEETTEEEEEEEE-----TTEEEECSCSB
T ss_pred EEEEEEEecCCCCCEEEEEE-----eEEEEECCCCC
Confidence 46777777754 33443 37999999853
No 65
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=25.59 E-value=15 Score=22.93 Aligned_cols=8 Identities=13% Similarity=-0.168 Sum_probs=7.0
Q ss_pred EEEcCCCC
Q psy17909 64 KVFCGHEY 71 (140)
Q Consensus 64 ~i~PGHg~ 71 (140)
.||||||-
T Consensus 13 ~IyPG~G~ 20 (66)
T 3j21_V 13 PFEPGTGK 20 (66)
T ss_dssp BCCTTCCE
T ss_pred cccCCCCe
Confidence 69999986
No 66
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=24.33 E-value=16 Score=22.78 Aligned_cols=8 Identities=13% Similarity=0.011 Sum_probs=7.0
Q ss_pred EEEcCCCC
Q psy17909 64 KVFCGHEY 71 (140)
Q Consensus 64 ~i~PGHg~ 71 (140)
.||||||-
T Consensus 12 ~IyPG~G~ 19 (66)
T 1vq8_U 12 DIEPGTGT 19 (66)
T ss_dssp BCCSSCCE
T ss_pred cccCCCce
Confidence 59999986
No 67
>4eo0_A Attachment protein G3P; filamentuos phage, infection, pilus binding, gene-3-protein, receptor binding, N-pilus; 1.61A {Enterobacteria phage ike}
Probab=23.27 E-value=25 Score=23.60 Aligned_cols=18 Identities=6% Similarity=0.110 Sum_probs=15.0
Q ss_pred CCCeeEEcceecCCCccC
Q psy17909 22 FVTSPLSGDTLFVAGAGK 39 (140)
Q Consensus 22 ~~~~lFtGDtLf~g~~Gr 39 (140)
+-+++|+||+.+.++.|.
T Consensus 71 ~frlv~~~~c~y~~spg~ 88 (115)
T 4eo0_A 71 QFRLVTGDTCVYNGSPGE 88 (115)
T ss_dssp CEEEEECSSCEESSCSEE
T ss_pred eEEEEeCCceeecCCCCc
Confidence 346899999999999885
Done!