Your job contains 1 sequence.
>psy17912
MVMRSPDMFELSRVYGRPSYSGGAPRGGAPRGGGGRGGYGAPRGYSRGGRGGGGSNYGSN
SNLRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPG
KCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTL
GYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAP
KGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKII
GQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD
YKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNE
FRIGRASILVSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASI
LVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKS
QQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVL
NEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRA
SILVSDFDILRQWRIAWDEAAVAEAQHLPCIETQPPGFELTRRLWVTLNRIRTKFGKCAA
NLHKWGLKSSAACDCGAEKQTILHIIQDCPRRRYSGDLKDFSTLNQSAINYINQLDLNV
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy17912
(779 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 1123 2.8e-123 3
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 1134 1.9e-121 2
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 1105 8.5e-119 2
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 1105 8.5e-119 2
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 1104 1.8e-118 2
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 1102 1.2e-117 2
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 1096 2.6e-117 2
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 1096 2.6e-117 2
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 1096 2.6e-117 2
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 1096 2.6e-117 2
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 1097 3.3e-117 2
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 1091 4.2e-117 2
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 1091 4.2e-117 2
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 1091 4.2e-117 2
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 1091 4.2e-117 2
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 1091 4.2e-117 2
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 1091 4.2e-117 2
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 1091 4.2e-117 2
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 1091 4.2e-117 2
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 1093 5.3e-117 2
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 1093 5.3e-117 2
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 1089 1.4e-116 2
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 1087 2.3e-116 2
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 1089 7.7e-116 2
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 1019 4.4e-109 2
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 978 2.5e-104 2
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 980 3.2e-104 2
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 1016 1.6e-102 1
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 987 2.2e-101 2
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 932 2.5e-100 2
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 994 3.4e-100 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 975 3.5e-98 1
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 965 4.1e-97 1
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 827 1.8e-94 3
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 931 1.6e-93 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 926 5.5e-93 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 816 9.1e-88 2
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 772 8.5e-87 3
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 860 5.4e-86 1
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 860 5.4e-86 1
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 822 5.8e-82 1
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 681 1.1e-70 2
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 662 1.2e-69 2
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 662 1.2e-69 2
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 663 6.0e-68 2
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p... 636 9.8e-68 2
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 680 6.5e-67 1
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 649 6.3e-66 2
UNIPROTKB|E1BII7 - symbol:DDX43 "Uncharacterized protein"... 669 9.4e-66 1
UNIPROTKB|F1NVJ6 - symbol:DDX43 "Uncharacterized protein"... 629 6.1e-64 2
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 660 7.1e-64 1
UNIPROTKB|F1S0I6 - symbol:DDX43 "Uncharacterized protein"... 651 7.6e-64 1
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 656 8.2e-64 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 652 1.1e-63 1
UNIPROTKB|Q86TM3 - symbol:DDX53 "Probable ATP-dependent R... 623 1.3e-63 2
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 650 1.5e-63 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 650 1.6e-63 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 650 1.8e-63 1
POMBASE|SPCC10H11.01 - symbol:prp11 "ATP-dependent RNA he... 652 2.3e-63 1
TAIR|locus:2034481 - symbol:STRS1 "STRESS RESPONSE SUPPRE... 645 3.3e-63 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 645 3.5e-63 1
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 647 3.8e-63 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 646 4.1e-63 1
DICTYBASE|DDB_G0293064 - symbol:DDB_G0293064 species:4468... 618 4.2e-63 2
UNIPROTKB|F1NQ09 - symbol:DDX43 "Uncharacterized protein"... 612 8.8e-63 2
WB|WBGene00018776 - symbol:F53H1.1 species:6239 "Caenorha... 641 2.7e-62 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 589 2.9e-62 2
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 636 3.0e-62 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 641 4.3e-62 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 641 4.3e-62 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 641 4.3e-62 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 641 4.3e-62 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 641 4.3e-62 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 641 4.3e-62 1
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 588 4.8e-62 2
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 588 4.8e-62 2
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 588 4.8e-62 2
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 588 4.8e-62 2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 587 6.1e-62 2
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 636 7.2e-62 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 636 7.4e-62 1
DICTYBASE|DDB_G0288501 - symbol:ddx42 "DEAD/DEAH box heli... 590 8.0e-62 3
UNIPROTKB|Q9NXZ2 - symbol:DDX43 "Probable ATP-dependent R... 631 1.0e-61 1
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 583 1.6e-61 2
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 583 1.6e-61 2
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 635 1.9e-61 1
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 582 2.0e-61 2
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 634 2.5e-61 1
DICTYBASE|DDB_G0281925 - symbol:DDB_G0281925 "DEAD/DEAH b... 601 2.6e-61 2
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 581 2.6e-61 2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 581 2.6e-61 2
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 581 2.6e-61 2
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 626 3.4e-61 1
SGD|S000006040 - symbol:DBP1 "Putative ATP-dependent RNA ... 588 4.2e-61 2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 579 4.2e-61 2
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 579 4.2e-61 2
CGD|CAL0004832 - symbol:orf19.7392 species:5476 "Candida ... 584 6.9e-61 2
ASPGD|ASPL0000077157 - symbol:AN10557 species:162425 "Eme... 623 7.1e-61 1
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 629 8.9e-61 1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 574 1.4e-60 2
WARNING: Descriptions of 777 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 1123 (400.4 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 219/369 (59%), Positives = 272/369 (73%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
LR +WN + + KN Y N RS EVE Y ++TVKGR G
Sbjct: 43 LRKKHWNLDELPKFEKNFYQENPDVARRSAQEVEHYRRSKEITVKGR---------DG-- 91
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
P+PI F E NFP Y+M I + + PT IQAQGWP+ALSG D+V IA+TGSGKTL Y
Sbjct: 92 -PKPIVKFHEANFPKYVMDVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSY 150
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA ++G A+ + C++GGAPKG
Sbjct: 151 LLPAIVHINHQPFLEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPKG 210
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+ Q
Sbjct: 211 PQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ 270
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ LMWSATWPKEV++LAEDFL +Y+Q+N+G+L +ANHNI+QIVDVC + EK+ K
Sbjct: 271 IRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVDVCNDGEKEDK 330
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L LL +I SE+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+K+QQERD VLNEF+
Sbjct: 331 LIRLLEEIMSEKENKTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFK 390
Query: 423 IGRASILVS 431
G+A IL++
Sbjct: 391 YGKAPILIA 399
Score = 84 (34.6 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +K+QQERD VLNEF+ G+A IL++
Sbjct: 374 HGDKNQQERDWVLNEFKYGKAPILIA 399
Score = 84 (34.6 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +K+QQERD VLNEF+ G+A IL++
Sbjct: 374 HGDKNQQERDWVLNEFKYGKAPILIA 399
Score = 84 (34.6 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +K+QQERD VLNEF+ G+A IL++
Sbjct: 374 HGDKNQQERDWVLNEFKYGKAPILIA 399
Score = 84 (34.6 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +K+QQERD VLNEF+ G+A IL++
Sbjct: 374 HGDKNQQERDWVLNEFKYGKAPILIA 399
Score = 40 (19.1 bits), Expect = 2.8e-123, Sum P(3) = 2.8e-123
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 747 QDCPRRRYSGDLKDFSTLNQ 766
+D R R+SG +DF + +Q
Sbjct: 493 RDDRRDRHSGSRRDFGSYSQ 512
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 1134 (404.2 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 222/364 (60%), Positives = 278/364 (76%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
W+ +++ KN Y P ++R+ GE E++L +++T+KG VP P
Sbjct: 109 WSEVNLTPFRKNFYKPCDSVLARTVGETETFLTSNEITIKGDQ------------VPTPS 156
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
FEE FP Y+M +I + GF PTAIQAQGWPIA+SG DLV +A+TGSGKTL Y+ PA+
Sbjct: 157 IEFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAV 216
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N+Q L G+GPI LVLAPTRELAQQI+ VA +FGS T R C+FGGAPKG Q +
Sbjct: 217 VHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPKGQQARD 276
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EIVIATPGRLID+LE+GT +L R +YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 277 LERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDEADRMLDMGFEPQIRKIMQQIRPDR 336
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
QVLMWSATWPKEV++LAE+FL +Y+Q+NIGSL+ +ANHNI+QIVDVC E+EK KL LL
Sbjct: 337 QVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVDVCDENEKLMKLIKLL 396
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ I +E +KTIIFVETK++ D+ITR++ +GW A AIHG+KSQQERD VL+ FR GR S
Sbjct: 397 TDISAENETKTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHS 456
Query: 428 ILVS 431
ILV+
Sbjct: 457 ILVA 460
Score = 81 (33.6 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQQERD VL+ FR GR SILV+
Sbjct: 435 HGDKSQQERDFVLSSFRNGRHSILVA 460
Score = 81 (33.6 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQQERD VL+ FR GR SILV+
Sbjct: 435 HGDKSQQERDFVLSSFRNGRHSILVA 460
Score = 81 (33.6 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQQERD VL+ FR GR SILV+
Sbjct: 435 HGDKSQQERDFVLSSFRNGRHSILVA 460
Score = 81 (33.6 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQQERD VL+ FR GR SILV+
Sbjct: 435 HGDKSQQERDFVLSSFRNGRHSILVA 460
Score = 76 (31.8 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
Identities = 17/24 (70%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VL+ FR GR SILV+
Sbjct: 437 DKSQQERDFVLSSFRNGRHSILVA 460
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 1105 (394.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 216/369 (58%), Positives = 269/369 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
L WN + + KN Y + V R+ EVE Y + +VTV+G C
Sbjct: 29 LTKKKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGH-----------NC 77
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
P+PI +F E NFP +M+ I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y
Sbjct: 78 -PKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSY 136
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKG
Sbjct: 137 LLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKG 196
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+ Q
Sbjct: 197 PQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ 256
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ LMWSATWPKEV++LAEDFL +YV +NIG+L +ANHNI+QIVDVC + EKD K
Sbjct: 257 IRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDK 316
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L L+ +I SE+ +KTI+FVETKR+ DD+TR +R GW A+ IHG+KSQQERD VLNEF+
Sbjct: 317 LIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 376
Query: 423 IGRASILVS 431
G+A IL++
Sbjct: 377 HGKAPILIA 385
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 360 HGDKSQQERDWVLNEFKHGKAPILIA 385
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 360 HGDKSQQERDWVLNEFKHGKAPILIA 385
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 360 HGDKSQQERDWVLNEFKHGKAPILIA 385
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 360 HGDKSQQERDWVLNEFKHGKAPILIA 385
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 360 HGDKSQQERDWVLNEFKHGKAPILIA 385
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 360 HGDKSQQERDWVLNEFKHGKAPILIA 385
Score = 80 (33.2 bits), Expect = 2.9e-118, Sum P(2) = 2.9e-118
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 362 DKSQQERDWVLNEFKHGKAPILIA 385
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 1105 (394.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 216/369 (58%), Positives = 269/369 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
L WN + + KN Y + V R+ EVE Y + +VTV+G C
Sbjct: 37 LTKKKWNLDELPKFEKNFYQEHPDVVRRTAQEVEQYRSSKEVTVRGH-----------NC 85
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
P+PI +F E NFP +M+ I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y
Sbjct: 86 -PKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSY 144
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKG
Sbjct: 145 LLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPKG 204
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+ Q
Sbjct: 205 PQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ 264
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ LMWSATWPKEV++LAEDFL +YV +NIG+L +ANHNI+QIVDVC + EKD K
Sbjct: 265 IRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVDVCHDVEKDDK 324
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L L+ +I SE+ +KTI+FVETKR+ DD+TR +R GW A+ IHG+KSQQERD VLNEF+
Sbjct: 325 LIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFK 384
Query: 423 IGRASILVS 431
G+A IL++
Sbjct: 385 HGKAPILIA 393
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 368 HGDKSQQERDWVLNEFKHGKAPILIA 393
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 368 HGDKSQQERDWVLNEFKHGKAPILIA 393
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 368 HGDKSQQERDWVLNEFKHGKAPILIA 393
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 368 HGDKSQQERDWVLNEFKHGKAPILIA 393
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 368 HGDKSQQERDWVLNEFKHGKAPILIA 393
Score = 85 (35.0 bits), Expect = 8.5e-119, Sum P(2) = 8.5e-119
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQQERD VLNEF+ G+A IL++
Sbjct: 368 HGDKSQQERDWVLNEFKHGKAPILIA 393
Score = 80 (33.2 bits), Expect = 2.9e-118, Sum P(2) = 2.9e-118
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 370 DKSQQERDWVLNEFKHGKAPILIA 393
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 1104 (393.7 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 214/370 (57%), Positives = 273/370 (73%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EVE ++T++G +E
Sbjct: 36 LRKKKWDLNELPKFEKNFYV-EHPEVARLTPYEVEELRRKKEITIRG------MEG---- 84
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
C P+P+ F +C+FP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 85 C-PKPVFAFHQCSFPQYVMDALMDQNFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 143
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 144 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 203
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 204 GPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 263
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DYVQ+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 264 QIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVDVCMESEKDH 323
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 324 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 383
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 384 RSGKAPILIA 393
Score = 83 (34.3 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 368 HGDKSQPERDWVLNEFRSGKAPILIA 393
Score = 83 (34.3 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 368 HGDKSQPERDWVLNEFRSGKAPILIA 393
Score = 83 (34.3 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 368 HGDKSQPERDWVLNEFRSGKAPILIA 393
Score = 83 (34.3 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 368 HGDKSQPERDWVLNEFRSGKAPILIA 393
Score = 83 (34.3 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 368 HGDKSQPERDWVLNEFRSGKAPILIA 393
Score = 83 (34.3 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 368 HGDKSQPERDWVLNEFRSGKAPILIA 393
Score = 78 (32.5 bits), Expect = 5.9e-118, Sum P(2) = 5.9e-118
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 370 DKSQPERDWVLNEFRSGKAPILIA 393
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 1102 (393.0 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 215/369 (58%), Positives = 272/369 (73%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
LR W+ + + KN Y N SQ +VE Y ++TV+G G C
Sbjct: 42 LRKKKWDLDQLPKFEKNFYNENPEVHHMSQYDVEEYRRKREITVRGS----------G-C 90
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
P+P+ +F + FP Y+M + + F+ PTAIQAQG+P+ALSG D+V IA+TGSGKTL Y
Sbjct: 91 -PKPVTNFHQAQFPQYVMDVLLQQNFKEPTAIQAQGFPLALSGRDMVGIAQTGSGKTLAY 149
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA D+G ++ + CV+GGAPKG
Sbjct: 150 LLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPKG 209
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+ Q
Sbjct: 210 PQIRDLERGVEICIATPGRLIDFLEVGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQ 269
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ LMWSATWPKEV++LAEDFL DYVQ+NIG+L +ANHNI+QIVDVC E+EKD K
Sbjct: 270 IRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVDVCMENEKDNK 329
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L L+ +I +E+ +KTIIFVETK++ D++TR +R GW A+ IHG+KSQ ERD VL EFR
Sbjct: 330 LIQLMEEIMAEKENKTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFR 389
Query: 423 IGRASILVS 431
G+A IL++
Sbjct: 390 SGKAPILIA 398
Score = 77 (32.2 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VL EFR G+A IL++
Sbjct: 373 HGDKSQPERDWVLTEFRSGKAPILIA 398
Score = 77 (32.2 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VL EFR G+A IL++
Sbjct: 373 HGDKSQPERDWVLTEFRSGKAPILIA 398
Score = 77 (32.2 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VL EFR G+A IL++
Sbjct: 373 HGDKSQPERDWVLTEFRSGKAPILIA 398
Score = 77 (32.2 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VL EFR G+A IL++
Sbjct: 373 HGDKSQPERDWVLTEFRSGKAPILIA 398
Score = 77 (32.2 bits), Expect = 1.2e-117, Sum P(2) = 1.2e-117
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VL EFR G+A IL++
Sbjct: 373 HGDKSQPERDWVLTEFRSGKAPILIA 398
Score = 72 (30.4 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VL EFR G+A IL++
Sbjct: 375 DKSQPERDWVLTEFRSGKAPILIA 398
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 1096 (390.9 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 212/364 (58%), Positives = 267/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EVE+Y ++TV+G C P+P+
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 80 (33.2 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 374 DKSQQERDWVLNEFKHGKAPILIA 397
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 1096 (390.9 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 212/364 (58%), Positives = 267/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EVE+Y ++TV+G C P+P+
Sbjct: 103 WNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGH-----------NC-PKPV 150
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 151 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 210
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 211 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 270
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 271 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 330
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 331 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 390
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 391 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 450
Query: 428 ILVS 431
IL++
Sbjct: 451 ILIA 454
Score = 80 (33.2 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 431 DKSQQERDWVLNEFKHGKAPILIA 454
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 1096 (390.9 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 212/364 (58%), Positives = 267/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EVE+Y ++TV+G C P+P+
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 80 (33.2 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 374 DKSQQERDWVLNEFKHGKAPILIA 397
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 1096 (390.9 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 212/364 (58%), Positives = 267/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EVE+Y ++TV+G C P+P+
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 80 (33.2 bits), Expect = 2.6e-117, Sum P(2) = 2.6e-117
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 374 DKSQQERDWVLNEFKHGKAPILIA 397
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 1097 (391.2 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 220/362 (60%), Positives = 270/362 (74%)
Query: 72 SMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFE 131
++ KN Y + +RS EV+ Y ++TV+G+ VP PIQ F
Sbjct: 238 NLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRGQ-------------VPNPIQDFS 284
Query: 132 ECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVN 191
E + P Y+MK+I G++APTAIQAQGWPIA+SG + V IAKTGSGKTLGYI PAIVH+N
Sbjct: 285 EVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHIN 344
Query: 192 SQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTG 251
+Q+PL+ G+GPI LVLAPTRELAQQI+ VA +FGS++ R CVFGGAPKG Q++ LQ G
Sbjct: 345 NQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRG 404
Query: 252 AEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLM 311
EIVIATPGRLID+L G+ NL R +YLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ LM
Sbjct: 405 CEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLM 464
Query: 312 WSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQI- 370
WSATWPKEV++LAEDFL +Y+Q+NIGSL +ANHNI Q+VDVC E K+ KL+ LLS I
Sbjct: 465 WSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIY 524
Query: 371 -GSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
SE K IIFVETKR+ D++ R +R+ G AIHG+KSQ ERD VL EFR G+++IL
Sbjct: 525 DTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNIL 584
Query: 430 VS 431
V+
Sbjct: 585 VA 586
Score = 78 (32.5 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VL EFR G+++ILV+
Sbjct: 561 HGDKSQSERDFVLREFRSGKSNILVA 586
Score = 78 (32.5 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VL EFR G+++ILV+
Sbjct: 561 HGDKSQSERDFVLREFRSGKSNILVA 586
Score = 78 (32.5 bits), Expect = 3.3e-117, Sum P(2) = 3.3e-117
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VL EFR G+++ILV+
Sbjct: 561 HGDKSQSERDFVLREFRSGKSNILVA 586
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 38 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 85
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 86 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 145
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 206 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 265
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 266 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 325
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 326 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 385
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 386 RSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 372 DKSQPERDWVLNEFRSGKAPILIA 395
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 38 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 85
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 86 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 145
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 206 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 265
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 266 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 325
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 326 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 385
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 386 RSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 372 DKSQPERDWVLNEFRSGKAPILIA 395
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 119 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 166
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 167 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 226
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 227 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 286
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 287 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 346
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 347 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 406
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 407 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 466
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 467 RSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 453 DKSQPERDWVLNEFRSGKAPILIA 476
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 38 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 85
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 86 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 145
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 206 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 265
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 266 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 325
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 326 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 385
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 386 RSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 372 DKSQPERDWVLNEFRSGKAPILIA 395
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 117 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 164
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 165 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 224
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 225 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 284
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 285 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 344
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 345 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 404
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 405 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 464
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 465 RSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 451 DKSQPERDWVLNEFRSGKAPILIA 474
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 117 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 164
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 165 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 224
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 225 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 284
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 285 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 344
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 345 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 404
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 405 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 464
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 465 RSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 449 HGDKSQPERDWVLNEFRSGKAPILIA 474
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 451 DKSQPERDWVLNEFRSGKAPILIA 474
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 119 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 166
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 167 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 226
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 227 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 286
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 287 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 346
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 347 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 406
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 407 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 466
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 467 RSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 451 HGDKSQPERDWVLNEFRSGKAPILIA 476
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 453 DKSQPERDWVLNEFRSGKAPILIA 476
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 1091 (389.1 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 212/370 (57%), Positives = 268/370 (72%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 38 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 85
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 86 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 145
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
Y+ PAIVH+N Q L G+GPI LVLAPTRELAQQ++ VA+D+G + + C++GGAPK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
GPQ++ L+ G EI IATPGRLID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 206 GPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVD 265
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD+
Sbjct: 266 QIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDH 325
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNEF
Sbjct: 326 KLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEF 385
Query: 422 RIGRASILVS 431
R G+A IL++
Sbjct: 386 RSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 83 (34.3 bits), Expect = 4.2e-117, Sum P(2) = 4.2e-117
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 370 HGDKSQPERDWVLNEFRSGKAPILIA 395
Score = 78 (32.5 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 372 DKSQPERDWVLNEFRSGKAPILIA 395
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 1093 (389.8 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 211/364 (57%), Positives = 267/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EV++Y ++TV+G C P+P+
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 80 (33.2 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 374 DKSQQERDWVLNEFKHGKAPILIA 397
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 1093 (389.8 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 211/364 (57%), Positives = 267/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EV++Y ++TV+G C P+P+
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVDTYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 80 (33.2 bits), Expect = 5.3e-117, Sum P(2) = 5.3e-117
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 374 DKSQQERDWVLNEFKHGKAPILIA 397
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 1089 (388.4 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 211/364 (57%), Positives = 266/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EVE+Y ++TV+G C P+P+
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G E IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVENCIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 80 (33.2 bits), Expect = 1.4e-116, Sum P(2) = 1.4e-116
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 374 DKSQQERDWVLNEFKHGKAPILIA 397
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 1087 (387.7 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 211/364 (57%), Positives = 266/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
W+ + KN Y + R+ EVE+Y ++TV+G C P+P+
Sbjct: 46 WDLDEPPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 80 (33.2 bits), Expect = 2.3e-116, Sum P(2) = 2.3e-116
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 374 DKSQQERDWVLNEFKHGKAPILIA 397
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 1089 (388.4 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
Identities = 211/364 (57%), Positives = 266/364 (73%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
WN + + KN Y + R+ EVE+Y ++TV+G C P+P+
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGH-----------NC-PKPV 93
Query: 128 QHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAI 187
+F E NFP +M I F PTAIQAQGWP+ALSG D+V +A+TGSGKTL Y+ PAI
Sbjct: 94 LNFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAI 153
Query: 188 VHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
VH+N Q L G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++
Sbjct: 154 VHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRD 213
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDR
Sbjct: 214 LERGVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDR 273
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q LMWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+
Sbjct: 274 QTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLM 333
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+I SE+ +KTI+FVETKR+ D++TR +R GW A+ IHG+KSQQER VLNEF+ G+A
Sbjct: 334 EEIMSEKENKTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAP 393
Query: 428 ILVS 431
IL++
Sbjct: 394 ILIA 397
Score = 73 (30.8 bits), Expect = 7.7e-116, Sum P(2) = 7.7e-116
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQER VLNEF+ G+A IL++
Sbjct: 374 DKSQQERGWVLNEFKHGKAPILIA 397
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 1019 (363.8 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 199/369 (53%), Positives = 263/369 (71%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
L+ +W+ ++ + K+ Y + +RSQ EV+ + ++TV+GR
Sbjct: 87 LKKQDWDLDTLPKFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRD------------ 134
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
VPRP++ F+E FP Y++ ++ GF+ PTAIQ+QGWP+ALSG D+V IA+TGSGKTL Y
Sbjct: 135 VPRPVETFDEAGFPQYVLSEVKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSY 194
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
PAIVH+N+Q L G+GPIVL+LAPTRELA QI+ + FG ++ R CV+GG PKG
Sbjct: 195 CLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKG 254
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ++ L G E+ IATPGRLID LE G NL R +YLVLDEADRMLDMGFEPQIRKII Q
Sbjct: 255 PQIRDLSRGVEVCIATPGRLIDMLEAGRTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQ 314
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ MWSATWPKEV++LA DFL +Y+Q+NIGS++ +ANH I QIV+V E EK +
Sbjct: 315 IRPDRQTCMWSATWPKEVRQLASDFLNNYIQVNIGSMDLSANHRITQIVEVISEFEKRDR 374
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
+ L +I R +K ++F TKR AD+ITR +R GW A++IHG+K QQERD VLNEF+
Sbjct: 375 MIKHLEKIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFK 434
Query: 423 IGRASILVS 431
G++ I+V+
Sbjct: 435 TGKSPIMVA 443
Score = 79 (32.9 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +K QQERD VLNEF+ G++ I+V+
Sbjct: 418 HGDKQQQERDWVLNEFKTGKSPIMVA 443
Score = 79 (32.9 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +K QQERD VLNEF+ G++ I+V+
Sbjct: 418 HGDKQQQERDWVLNEFKTGKSPIMVA 443
Score = 79 (32.9 bits), Expect = 4.4e-109, Sum P(2) = 4.4e-109
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +K QQERD VLNEF+ G++ I+V+
Sbjct: 418 HGDKQQQERDWVLNEFKTGKSPIMVA 443
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 978 (349.3 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 194/368 (52%), Positives = 246/368 (66%)
Query: 66 PNWNSM--SMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCV 123
PNW+ + KN Y + RS E+ + +++T+ G +
Sbjct: 61 PNWDEELPKLPTFEKNFYVEHESVRDRSDSEIAQFRKENEMTISGHD------------I 108
Query: 124 PRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYI 183
P+PI F+E FP Y++ ++ GF PT IQ QGWP+ALSG D+V IA TGSGKTL Y
Sbjct: 109 PKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYC 168
Query: 184 APAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGP 243
P IVH+N+Q L G+GPIVLVLAPTRELA QI+T + FG ++ R CV+GG PK
Sbjct: 169 LPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQ 228
Query: 244 QVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI 303
Q++ L G+EIVIATPGRLID LE G NL R +YLVLDEADRMLDMGFEPQIRKI+ QI
Sbjct: 229 QIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQI 288
Query: 304 RPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKL 363
RPDRQ LMWSATWPKEV++LA D+L D +Q+ +GSL +A+HNI QIV+V + EK +L
Sbjct: 289 RPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVEVVSDFEKRDRL 348
Query: 364 QGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRI 423
L + KT+IF TKR DDIT+ +R GW A+AIHG+K Q+ERD VL EFR
Sbjct: 349 NKYLETASQDNEYKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRN 408
Query: 424 GRASILVS 431
GR+ I+V+
Sbjct: 409 GRSPIMVA 416
Score = 75 (31.5 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 559 LVSHYNKSQQERDRVLNEFRIGRASILVS 587
L H +K Q+ERD VL EFR GR+ I+V+
Sbjct: 388 LAIHGDKDQRERDWVLQEFRNGRSPIMVA 416
Score = 75 (31.5 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 585 LVSHYNKSQQERDRVLNEFRIGRASILVS 613
L H +K Q+ERD VL EFR GR+ I+V+
Sbjct: 388 LAIHGDKDQRERDWVLQEFRNGRSPIMVA 416
Score = 75 (31.5 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 611 LVSHYNKSQQERDRVLNEFRIGRASILVS 639
L H +K Q+ERD VL EFR GR+ I+V+
Sbjct: 388 LAIHGDKDQRERDWVLQEFRNGRSPIMVA 416
Score = 75 (31.5 bits), Expect = 2.5e-104, Sum P(2) = 2.5e-104
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 637 LVSHYNKSQQERDRVLNEFRIGRASILVS 665
L H +K Q+ERD VL EFR GR+ I+V+
Sbjct: 388 LAIHGDKDQRERDWVLQEFRNGRSPIMVA 416
Score = 68 (29.0 bits), Expect = 1.4e-103, Sum P(2) = 1.4e-103
Identities = 14/24 (58%), Positives = 19/24 (79%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+K Q+ERD VL EFR GR+ I+V+
Sbjct: 393 DKDQRERDWVLQEFRNGRSPIMVA 416
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 980 (350.0 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 198/373 (53%), Positives = 261/373 (69%)
Query: 66 PNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPR 125
P W ++ E K+ Y + T+++S+ +V ++TV G +P
Sbjct: 189 PKWENL--EPFLKDFYNIHPNTLAKSEQQVAEIRRELEITVSGNE------------LPH 234
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
P+ FEE + P ++++++ GF PTAIQ+QGWPIALSG DLV IA+TGSGKTL Y+ P
Sbjct: 235 PVVSFEESSLPAHVIEEMKRQGFTKPTAIQSQGWPIALSGRDLVGIAQTGSGKTLAYMLP 294
Query: 186 AIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRV--ACVFGGAPKGP 243
AIVH+ +Q P+ GEGPI LVLAPTRELAQQI++V D+G + C+FGG+ K P
Sbjct: 295 AIVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGSSKVP 354
Query: 244 QVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI 303
Q + L G E++IATPGRLID+LE NL R +YLVLDEADRMLDMGFEPQIRKII QI
Sbjct: 355 QARDLDRGVEVIIATPGRLIDFLENRNTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI 414
Query: 304 RPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKL 363
RPDRQV+MWSATWPKEVQ LA DFL DY+Q+NIGS+N +ANHNI QIV++C E EK +L
Sbjct: 415 RPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQIVEICTEIEKPQRL 474
Query: 364 QGLLSQIGSERTS-----KTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVL 418
LL++I + S K I+FVETK K +DI + +R +G+ A +IHG+K+Q ERD VL
Sbjct: 475 VCLLNEISPIKNSGNNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVL 534
Query: 419 NEFRIGRASILVS 431
+FR G+++IL++
Sbjct: 535 KDFRNGKSNILIA 547
Score = 72 (30.4 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +K+Q ERD VL +FR G+++IL++
Sbjct: 522 HGDKTQNERDSVLKDFRNGKSNILIA 547
Score = 72 (30.4 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +K+Q ERD VL +FR G+++IL++
Sbjct: 522 HGDKTQNERDSVLKDFRNGKSNILIA 547
Score = 72 (30.4 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +K+Q ERD VL +FR G+++IL++
Sbjct: 522 HGDKTQNERDSVLKDFRNGKSNILIA 547
Score = 72 (30.4 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +K+Q ERD VL +FR G+++IL++
Sbjct: 522 HGDKTQNERDSVLKDFRNGKSNILIA 547
Score = 72 (30.4 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +K+Q ERD VL +FR G+++IL++
Sbjct: 522 HGDKTQNERDSVLKDFRNGKSNILIA 547
Score = 72 (30.4 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 13/26 (50%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +K+Q ERD VL +FR G+++IL++
Sbjct: 522 HGDKTQNERDSVLKDFRNGKSNILIA 547
Score = 67 (28.6 bits), Expect = 1.1e-103, Sum P(2) = 1.1e-103
Identities = 12/24 (50%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+K+Q ERD VL +FR G+++IL++
Sbjct: 524 DKTQNERDSVLKDFRNGKSNILIA 547
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 1016 (362.7 bits), Expect = 1.6e-102, P = 1.6e-102
Identities = 198/371 (53%), Positives = 263/371 (70%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
L+ +W+ ++ + K+ Y + +RSQ EV+ + H + V+G
Sbjct: 72 LQKQDWDINALPKFEKHFYKEHPDVTNRSQAEVDKFRREHSMAVQG------------SD 119
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
VP+P++ F+E FP Y+M ++ GF APTAIQ+QGWP+ALSG D+V IA+TGSGKTL Y
Sbjct: 120 VPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTY 179
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
PAIVH+N+Q L G+GPIVL+LAPTRELA QI+ + FG ++ R CV+GG PKG
Sbjct: 180 CLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPKG 239
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ++ L G E+ IATPGRLID LE G NL R +YLVLDEADRMLDMGFEPQIRKIIGQ
Sbjct: 240 PQIRDLSRGVEVCIATPGRLIDMLESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIIGQ 299
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ LMWSATWPKEV+ +A DFL D++Q+NIGSL+ +ANH I QIV+V E EK +
Sbjct: 300 IRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVEVVSESEKRDR 359
Query: 363 LQGLLSQI--GSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNE 420
+ + ++ G + +K +IFV TKR AD+ITR +R GW A++IHG+K Q ERD VL++
Sbjct: 360 MIRHMEKVMDGKDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQ 419
Query: 421 FRIGRASILVS 431
F+ G++ I+V+
Sbjct: 420 FKTGKSPIMVA 430
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 987 (352.5 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 194/369 (52%), Positives = 260/369 (70%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
LR +W++ ++ I K+ Y N R Q E++ +++ + VT++GR G
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGR----------G-- 124
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
VPRP+ F E P I + +Y FQ PT IQ+ WPIA+SG D+++IAKTGSGKTL +
Sbjct: 125 VPRPVFEFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAF 183
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
+ PA+VH+ Q + GEGP VLVL PTRELAQQ++ V+ DF + ++ C+FGGA KG
Sbjct: 184 MLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKG 243
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ + L+ G +IV+ATPGRL+D+L+ GT N+ + SYLVLDEADRMLDMGFEPQI+KIIGQ
Sbjct: 244 PQARDLERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQ 303
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ LM+SATWPKEV+ LA DF D LN+GSL ANHNI Q+VD+ +EH K K
Sbjct: 304 IRPDRQTLMFSATWPKEVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAK 363
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L LL+ I +++ KTIIFVETKRKAD++TR++R GW + IHG+K+Q ERD VL EF+
Sbjct: 364 LMELLNHIMNQKECKTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFK 423
Query: 423 IGRASILVS 431
G+ I+++
Sbjct: 424 AGKTPIMLA 432
Score = 38 (18.4 bits), Expect = 2.2e-101, Sum P(2) = 2.2e-101
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 739 KQTILHIIQDCPRRRYSG 756
KQT+ ++D R Y G
Sbjct: 499 KQTVPQALRDMANRSYGG 516
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 932 (333.1 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 195/371 (52%), Positives = 247/371 (66%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
LR W+ + + KN Y H V+R + EV+ ++TV+G G
Sbjct: 38 LRKKKWDLSELPKFEKNFYV-EHPEVARLTPYEVDELRRKKEITVRG-----------GD 85
Query: 122 CVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLG 181
P+P+ F NFP Y+M + + F PT IQ QG+P+ALSG D+V IA+TGSGKTL
Sbjct: 86 VCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLA 145
Query: 182 YIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRV-ACVFGGAP 240
Y+ PAIVH+N Q L G+GPIV VL P + DF ++ C G +
Sbjct: 146 YLLPAIVHINHQPYLERGDGPIVSVL-PFFSTLFSVYRGGTDFKFKCSSLFWVCFLGQSL 204
Query: 241 KGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKII 300
KG +++ L EI IATPGR ID+LE G NL R +YLVLDEADRMLDMGFEPQIRKI+
Sbjct: 205 KGQRLEWLSQCVEICIATPGR-IDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIV 263
Query: 301 GQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD 360
QIRPDRQ LMWSATWPKEV++LAEDFL DY Q+N+G+L +ANHNI+QIVDVC E EKD
Sbjct: 264 DQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKD 323
Query: 361 YKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNE 420
+KL L+ +I +E+ +KTIIFVETKR+ DD+TR +R GW A+ IHG+KSQ ERD VLNE
Sbjct: 324 HKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNE 383
Query: 421 FRIGRASILVS 431
FR G+A IL++
Sbjct: 384 FRSGKAPILIA 394
Score = 83 (34.3 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 369 HGDKSQPERDWVLNEFRSGKAPILIA 394
Score = 83 (34.3 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 369 HGDKSQPERDWVLNEFRSGKAPILIA 394
Score = 83 (34.3 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 369 HGDKSQPERDWVLNEFRSGKAPILIA 394
Score = 83 (34.3 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 369 HGDKSQPERDWVLNEFRSGKAPILIA 394
Score = 83 (34.3 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 369 HGDKSQPERDWVLNEFRSGKAPILIA 394
Score = 83 (34.3 bits), Expect = 2.5e-100, Sum P(2) = 2.5e-100
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +KSQ ERD VLNEFR G+A IL++
Sbjct: 369 HGDKSQPERDWVLNEFRSGKAPILIA 394
Score = 78 (32.5 bits), Expect = 8.6e-100, Sum P(2) = 8.6e-100
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLNEFR G+A IL++
Sbjct: 371 DKSQPERDWVLNEFRSGKAPILIA 394
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 194/369 (52%), Positives = 253/369 (68%)
Query: 63 LRTPNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKC 122
L P W+ + + KN Y+ + +RS ++E + +++TVKG
Sbjct: 74 LTAPQWDLEQLPKFEKNFYSEHPDVAARSDRDIEQFRKENEMTVKGHD------------ 121
Query: 123 VPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
+P PI F+E FP Y+++++ + GF PT IQ QGWP+ALSG D++ IA TGSGKTL Y
Sbjct: 122 IPHPITTFDEAGFPDYVLQEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSY 181
Query: 183 IAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
P+IVH+N+Q L+ G+GPIVLVLAPTRELA QI+T + FG ++ R CV+GGAPKG
Sbjct: 182 CLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPKG 241
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ++ L G EI IATPGRLID LE G NL R +YLVLDEADRMLDMGFEPQIRKI+ Q
Sbjct: 242 PQIRDLARGVEICIATPGRLIDMLEAGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQ 301
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
IRPDRQ LMWSATWPKEVQ+L D+L D +Q+ IGSL A+H I Q+V+V E K +
Sbjct: 302 IRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVEVIDEFSKRDR 361
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L L +E+ +K ++F TKR D+IT +R+ GW A+AIHG+K Q ERD VL+EFR
Sbjct: 362 LVKHLESALNEKDNKILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFR 421
Query: 423 IGRASILVS 431
G+ SI+V+
Sbjct: 422 KGKTSIMVA 430
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 191/365 (52%), Positives = 253/365 (69%)
Query: 67 NWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRP 126
+W + ++ K+ Y + +RS EV Y ++ V G L VP+P
Sbjct: 73 DWKNETLIPFQKDFYKEHENVRNRSDAEVTEYRKEKEIVVHG------LN------VPKP 120
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ FEE FP Y++K++ ++GF+APT IQ Q WP+A+SG D+V I+ TGSGKTL Y PA
Sbjct: 121 VTTFEEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPA 180
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVK 246
IVH+N+Q L G+GPIVLVLAPTRELA QI+ FG ++ R CV+GG P+GPQ++
Sbjct: 181 IVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPRGPQIR 240
Query: 247 ALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD 306
L G EI IATPGRL+D L+ NL R +YLVLDEADRMLDMGFEPQIRKI+ QIRPD
Sbjct: 241 DLIRGVEICIATPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPD 300
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ +M+SATWPKEVQ+LA D+L DY+Q+ +GSL+ A+HNI QIV+V +K +L
Sbjct: 301 RQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEVVDNADKRARLGKD 360
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
+ ++ +R +K +IF TKR ADDITR +R GW A+AIHG+K+Q ERD VLNEFR G++
Sbjct: 361 IEEVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKS 420
Query: 427 SILVS 431
I+V+
Sbjct: 421 PIMVA 425
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 965 (344.8 bits), Expect = 4.1e-97, P = 4.1e-97
Identities = 196/366 (53%), Positives = 249/366 (68%)
Query: 67 NWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPR 125
+W+ + + KN Y H VS+ +Q E+E + +TVKGR VP
Sbjct: 335 SWDLSKLPRFEKNFYL-EHPDVSKFTQEEIEKFRASFQMTVKGRE------------VPP 381
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
PI F + FP Y+MK+I GF PT IQ+Q WPIAL G D++ +AKTGSGKTL ++ P
Sbjct: 382 PIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLP 441
Query: 186 AIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQV 245
+IVH+N+Q LR +GPIVLVLAPTRELA QI+ N FG + CV+GGA K QV
Sbjct: 442 SIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQV 501
Query: 246 KALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRP 305
AL+ G EIVIATPGRLID LE G NL R +YLVLDEADRMLDMGFEPQIRKII QIRP
Sbjct: 502 AALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRP 561
Query: 306 DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQG 365
DRQ LM+SATWPKEVQ LA DFL D++Q++IGS TANHN+ QIV+VCQ+ EK ++
Sbjct: 562 DRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLS 621
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
L +G R K I+F ET++ DD+ R ++ G+ ++ IHGNKSQ ERD VL++F+ G
Sbjct: 622 FLGSVG--RDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGM 679
Query: 426 ASILVS 431
I+++
Sbjct: 680 VPIMIA 685
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 827 (296.2 bits), Expect = 1.8e-94, Sum P(3) = 1.8e-94
Identities = 155/233 (66%), Positives = 192/233 (82%)
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++ L+ G EI IAT
Sbjct: 86 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIAT 145
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ LMWSATWPK
Sbjct: 146 PGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 205
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
EV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+ +I SE+ +KT
Sbjct: 206 EVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKT 265
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
I+FVETKR+ D++TR +R GW A+ IHG+KSQQERD VLNEF+ G+A IL++
Sbjct: 266 IVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIA 318
Score = 80 (33.2 bits), Expect = 1.8e-94, Sum P(3) = 1.8e-94
Identities = 16/24 (66%), Positives = 21/24 (87%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQQERD VLNEF+ G+A IL++
Sbjct: 295 DKSQQERDWVLNEFKHGKAPILIA 318
Score = 66 (28.3 bits), Expect = 1.8e-94, Sum P(3) = 1.8e-94
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKG 108
WN + + KN Y + R+ EVE+Y ++TV+G
Sbjct: 46 WNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRG 86
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
Identities = 185/354 (52%), Positives = 246/354 (69%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
KN Y + + + EVE Y ++TV+G K +P+P++ F + FP
Sbjct: 61 KNFYVESPAVAAMTDTEVEEYRKLREITVEG------------KDIPKPVKSFRDVGFPD 108
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLR 197
Y+++++ + GF PT IQ+QGWP+A+ G DL+ IA+TGSGKTL Y+ PAIVHVN+Q L
Sbjct: 109 YVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLA 168
Query: 198 SGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIA 257
G+GPIVLVLAPTRELA QI+ A+ FGS++ + C++GG PKGPQV+ LQ G EIVIA
Sbjct: 169 HGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIA 228
Query: 258 TPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWP 317
TPGRLID +E NL R +YLVLDEADRMLDMGF+PQIRKI+ IRPDRQ L WSATWP
Sbjct: 229 TPGRLIDMMESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWP 288
Query: 318 KEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSK 377
KEV++L++ FL + ++ IGS + AN I QIVDV E +K KL LL I S+
Sbjct: 289 KEVEQLSKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDG--SR 346
Query: 378 TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++F++TK+ D ITR +R GW A++IHG+KSQ ERD VL+EFR G++ I+ +
Sbjct: 347 ILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTA 400
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 926 (331.0 bits), Expect = 5.5e-93, P = 5.5e-93
Identities = 188/366 (51%), Positives = 248/366 (67%)
Query: 66 PNWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPR 125
P N ++ KN Y + + ++ +V Y D++V+GR VP+
Sbjct: 115 PKQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRD------------VPK 162
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
P++ F++ NFP I++ I ++GF PT IQAQGWP+AL G DL+ IA+TGSGKTL Y+ P
Sbjct: 163 PMKMFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLP 222
Query: 186 AIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQV 245
A+VHV++Q L +GPIVL+LAPTRELA QI+ + FG + R C++GGAPKGPQ+
Sbjct: 223 ALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQI 282
Query: 246 KALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRP 305
+ L+ G EIVIATPGRLID LE NL R +YLVLDEADRMLDMGFEPQIRKI+ QIRP
Sbjct: 283 RDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRP 342
Query: 306 DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQG 365
DRQ L+WSATWP+EV+ LA FL D + IGS + AN +I Q++++ EK +L
Sbjct: 343 DRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLT 402
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
LL Q+ SK +IFVETKR D +TR +R GW A+AIHG+K+Q ERDRVL EF+ GR
Sbjct: 403 LLKQLMDG--SKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGR 460
Query: 426 ASILVS 431
+ I+ +
Sbjct: 461 SPIMTA 466
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 816 (292.3 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 180/358 (50%), Positives = 234/358 (65%)
Query: 77 NKNLYTPNHLTVSRSQ--GEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECN 134
NK+L P+ +T VE Y H+VT G E+ +P P FE
Sbjct: 394 NKSLVRPHFVTSPDVPHLSPVEIYRKQHEVTTTG-------EN-----IPAPYITFESSG 441
Query: 135 FPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR 194
PP I++++ GF +PT IQAQ WPIAL D+VAIAKTGSGKTLGY+ PA + + R
Sbjct: 442 LPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAFILLRHCR 501
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEI 254
S GP VL+LAPTRELA QI+ A FG ++ C++GGAPKGPQ+K L+ GA+I
Sbjct: 502 N-DSRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQLKELERGADI 560
Query: 255 VIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSA 314
V+ATPGRL D LE I+ + S LVLDEADRMLDMGFEPQIRKI+ +I P RQ LM++A
Sbjct: 561 VVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQTLMYTA 620
Query: 315 TWPKEVQKLAEDFLVDYVQLNIGSLNP-TANHNIVQIVDVCQEHEKDYKLQGLLSQIGSE 373
TWPKEV+K+A D LV+ VQ+NIG ++ AN I Q V+V + EK+ +L+ +L E
Sbjct: 621 TWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRS--QE 678
Query: 374 RTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
R SK IIF TKR D + RSV + + AV IHG+K+Q ERD VLN+FR G++ +L++
Sbjct: 679 RGSKVIIFCSTKRLCDHLARSV-GRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIA 735
Score = 80 (33.2 bits), Expect = 9.1e-88, Sum P(2) = 9.1e-88
Identities = 34/116 (29%), Positives = 52/116 (44%)
Query: 579 IGRA-SILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASIL 637
+GR +V H +K+Q ERD VLN+FR G++ +L++ R + + R+
Sbjct: 700 VGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIA---TDVAARGLDIKDIRV------ 750
Query: 638 VSHYNKSQQERDRVLNEFRIGRASILVSDFDILRQ--WRIAWDEAAVAEA--QHLP 689
V +Y+ D V R GRA F + W+ A D V E Q +P
Sbjct: 751 VINYDFPTGVEDYVHRIGRTGRAGATGVAFTFFTEQDWKYAPDLIKVLEGANQQVP 806
Score = 77 (32.2 bits), Expect = 1.9e-87, Sum P(2) = 1.9e-87
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 553 IGRA-SILVSHYNKSQQERDRVLNEFRIGRASILVS 587
+GR +V H +K+Q ERD VLN+FR G++ +L++
Sbjct: 700 VGRHFGAVVIHGDKTQGERDWVLNQFRSGKSCVLIA 735
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 772 (276.8 bits), Expect = 8.5e-87, Sum P(3) = 8.5e-87
Identities = 157/293 (53%), Positives = 206/293 (70%)
Query: 141 KKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSGE 200
+ +Y GF AP+ IQAQ WPIA+ D+VAIAKTGSGKTLGY+ P +H+ QR
Sbjct: 242 RMVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIPGFMHL--QRIHNDSR 299
Query: 201 -GPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATP 259
GP +LVL+PTRELA QI+ A FG ++ AC++GGAPKGPQ+K ++ G +IV+ATP
Sbjct: 300 MGPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQLKEIERGVDIVVATP 359
Query: 260 GRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKE 319
GRL D LE I+LH+ SYLVLDEADRMLDMGFEPQIRKI+ ++ RQ LM++ATWPKE
Sbjct: 360 GRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWPKE 419
Query: 320 VQKLAEDFLVDYVQLNIGSLNP-TANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
V+K+A D LV+ Q+NIG+++ AN +I Q ++V EK +L+ +L E SK
Sbjct: 420 VRKIAADLLVNPAQVNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILRS--QEPGSKI 477
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
IIF TKR D + R++ + + A AIHG+KSQ ERD VLN+FR GR +LV+
Sbjct: 478 IIFCSTKRMCDQLARNL-TRTFGAAAIHGDKSQAERDDVLNQFRSGRTPVLVA 529
Score = 75 (31.5 bits), Expect = 8.5e-87, Sum P(3) = 8.5e-87
Identities = 15/24 (62%), Positives = 19/24 (79%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+KSQ ERD VLN+FR GR +LV+
Sbjct: 506 DKSQAERDDVLNQFRSGRTPVLVA 529
Score = 53 (23.7 bits), Expect = 8.5e-87, Sum P(3) = 8.5e-87
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEEC-NFPPYIM 140
E+Y H++TV G L S +P + EC NF PY +
Sbjct: 141 EAYCRKHEITVSGGQVPPPLMSFEATGLPNEL--LRECPNFMPYAL 184
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 180/367 (49%), Positives = 243/367 (66%)
Query: 67 NWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPR 125
+W ++++ KN Y H +S+ S EV+ + H +T+ LE G+ VP+
Sbjct: 63 DWKTINLVPFEKNFYK-EHEDISKLSTKEVKEIRDKHKITI--------LE---GENVPK 110
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
P+ + FP Y++K + APT IQ QGWPIALSG D++ A+TGSGKTL +I P
Sbjct: 111 PVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILP 170
Query: 186 AIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQV 245
A VH+ +Q L+ G+GPIVLVLAPTRELA+QI F + + R C +GG PK Q+
Sbjct: 171 AFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQI 230
Query: 246 KALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRP 305
AL+ G I+IA PGRLID LEQ NL R +YLVLDEAD+MLDMGFE QIRKI+ QIRP
Sbjct: 231 YALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRP 290
Query: 306 DRQVLMWSATWPKEVQKLAEDFLVDY-VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
DRQ LMWSATWPKEVQ LA+D + +Q+N+GSL TA +I Q + + +EHEK L+
Sbjct: 291 DRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLK 350
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
LL +I + + I+FVETK+ AD IT+++R G A+ IHG+K Q+ER VLNEF+ G
Sbjct: 351 SLLQRIFKDN-DRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTG 409
Query: 425 RASILVS 431
++ I+++
Sbjct: 410 KSPIMIA 416
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 180/367 (49%), Positives = 243/367 (66%)
Query: 67 NWNSMSMEQINKNLYTPNHLTVSR-SQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPR 125
+W ++++ KN Y H +S+ S EV+ + H +T+ LE G+ VP+
Sbjct: 63 DWKTINLVPFEKNFYK-EHEDISKLSTKEVKEIRDKHKITI--------LE---GENVPK 110
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
P+ + FP Y++K + APT IQ QGWPIALSG D++ A+TGSGKTL +I P
Sbjct: 111 PVVSINKIGFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILP 170
Query: 186 AIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQV 245
A VH+ +Q L+ G+GPIVLVLAPTRELA+QI F + + R C +GG PK Q+
Sbjct: 171 AFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPKSGQI 230
Query: 246 KALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRP 305
AL+ G I+IA PGRLID LEQ NL R +YLVLDEAD+MLDMGFE QIRKI+ QIRP
Sbjct: 231 YALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKMLDMGFELQIRKIVDQIRP 290
Query: 306 DRQVLMWSATWPKEVQKLAEDFLVDY-VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
DRQ LMWSATWPKEVQ LA+D + +Q+N+GSL TA +I Q + + +EHEK L+
Sbjct: 291 DRQTLMWSATWPKEVQALAKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLK 350
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
LL +I + + I+FVETK+ AD IT+++R G A+ IHG+K Q+ER VLNEF+ G
Sbjct: 351 SLLQRIFKDN-DRIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTG 409
Query: 425 RASILVS 431
++ I+++
Sbjct: 410 KSPIMIA 416
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 173/337 (51%), Positives = 228/337 (67%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
E+Y H++TV G G+ VP P+ FE FPP +++++ GF APT IQ
Sbjct: 138 EAYSRRHEITVSG-----------GQ-VPPPLMSFEATGFPPELLREVLSAGFSAPTPIQ 185
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQ 215
AQ WPIA+ G D+VAIAKTGSGKTLGY+ P +H+ R S GP +LVL+PTRELA
Sbjct: 186 AQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFLHLQRIRN-DSRMGPTILVLSPTRELAT 244
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI+ A FG ++ C++GGAPKGPQ++ L+ GA+IV+ATPGRL D LE I+L +
Sbjct: 245 QIQEEAVKFGRSSRISCTCLYGGAPKGPQLRDLERGADIVVATPGRLNDILEMRRISLRQ 304
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLN 335
SYLVLDEADRMLDMGFEPQIRKI+ +I RQ LM++ATWPK V+K+A D LV+ Q+N
Sbjct: 305 ISYLVLDEADRMLDMGFEPQIRKIVKEIPTKRQTLMYTATWPKGVRKIAADLLVNPAQVN 364
Query: 336 IGSLNP-TANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRS 394
IG+++ AN +I Q ++V EK +L+ +L E SK IIF TKR D +TR+
Sbjct: 365 IGNVDELVANKSITQHIEVVAPMEKQRRLEQILRS--QEPGSKVIIFCSTKRMCDQLTRN 422
Query: 395 VRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ + + A AIHG+KSQ ERD VLN+FR GR +LV+
Sbjct: 423 LTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLVA 458
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 681 (244.8 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 153/368 (41%), Positives = 220/368 (59%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPI 127
W + + + KN Y +RS EV+ + ++ ++ L+ + +P P+
Sbjct: 224 WQDLPV--LKKNFYIEAKSVAARSAEEVKIWRKENN-----NIFVDDLKDGDKRTIPNPV 276
Query: 128 QHFEECNFPPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
FEE F Y IM+ I +GF+ PT IQ+Q WP+ L+G DL+ IA+TG+GKTL Y+ P
Sbjct: 277 CTFEEA-FAHYPGIMENIVRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLP 335
Query: 186 AIVHVNSQ-RPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQ 244
+H++ Q P GP +LVL PTRELA QIE N + S + C++GG + Q
Sbjct: 336 GFIHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKY-SYKGFKSICIYGGGDRNAQ 394
Query: 245 VKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+K + +G +IVIATPGRL D INL +YLVLDEADRMLDMGFEPQI KII IR
Sbjct: 395 IKVVTSGVDIVIATPGRLNDLQMNELINLRSITYLVLDEADRMLDMGFEPQIMKIILDIR 454
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEK-DYKL 363
PDRQ +M SATWP V++LA+ +L D + + +G+L+ A + + Q V QE EK DY
Sbjct: 455 PDRQTVMTSATWPPGVRRLAKSYLKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVF 514
Query: 364 QGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRI 423
+ ++ E K +IFV K KADD++ + +G A ++HG++ Q +R+ L +F+
Sbjct: 515 D-FIHRM--EPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDFKD 571
Query: 424 GRASILVS 431
GR ILV+
Sbjct: 572 GRVRILVA 579
Score = 53 (23.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q +R+ L +F+ GR ILV+
Sbjct: 554 HGDREQCDREEALQDFKDGRVRILVA 579
Score = 53 (23.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q +R+ L +F+ GR ILV+
Sbjct: 554 HGDREQCDREEALQDFKDGRVRILVA 579
Score = 53 (23.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q +R+ L +F+ GR ILV+
Sbjct: 554 HGDREQCDREEALQDFKDGRVRILVA 579
Score = 53 (23.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++ Q +R+ L +F+ GR ILV+
Sbjct: 554 HGDREQCDREEALQDFKDGRVRILVA 579
Score = 53 (23.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++ Q +R+ L +F+ GR ILV+
Sbjct: 554 HGDREQCDREEALQDFKDGRVRILVA 579
Score = 53 (23.7 bits), Expect = 1.1e-70, Sum P(2) = 1.1e-70
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++ Q +R+ L +F+ GR ILV+
Sbjct: 554 HGDREQCDREEALQDFKDGRVRILVA 579
Score = 42 (19.8 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R+ L +F+ GR ILV+
Sbjct: 559 QCDREEALQDFKDGRVRILVA 579
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 662 (238.1 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 145/361 (40%), Positives = 216/361 (59%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHH-DVTVKGRYYLLRLESRPGKCVPRPIQHFEECN 134
I+KN Y T S SQ +V+ + + +V L E RP +P PI FE+
Sbjct: 176 IHKNFYVETKATSSMSQVQVDIWRKENFNVMCND---LKDGEKRP---IPNPICKFEDA- 228
Query: 135 FPPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
F PY +MK I + GFQ PT IQ+Q WPI L G DL+ IA+TG+GKTL Y+ P +H+NS
Sbjct: 229 FGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNS 288
Query: 193 QRPLRSGE--GPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQT 250
Q P+ G+ GP +LVL PTRELA Q+ + + S + C++GG + Q++ +
Sbjct: 289 Q-PVSRGKRNGPGMLVLTPTRELALQVGAECSKY-SYKGLKSVCIYGGGNRKGQIQDIMK 346
Query: 251 GAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVL 310
G +I+IATPGRL D +NL +YLVLDEAD+MLD+GFE QI KI+ +RPDRQ +
Sbjct: 347 GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTI 406
Query: 311 MWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQI 370
M SATWP +++LA +L + + + +G+L+ A + Q + + E EK Q L +
Sbjct: 407 MTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSL 466
Query: 371 GSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILV 430
+ K I+FV K ADD++ + +G ++HG++ Q +R+R L++F+ G+ IL+
Sbjct: 467 SPK--DKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILI 524
Query: 431 S 431
+
Sbjct: 525 A 525
Score = 62 (26.9 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 647
H ++ Q +R+R L++F+ G+ IL++ S R L+ + V +YN +
Sbjct: 500 HGDREQSDRERALDDFKTGKVKILIATDLAS-----RGLDVSDVTH----VFNYNFPRNI 550
Query: 648 RDRVLNEFRIGRASILVSDFDILRQ--WRIA 676
+ V R GRA + ++ Q W++A
Sbjct: 551 EEYVHRVGRTGRAGKMGESVTLMTQDDWKVA 581
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 500 HGDREQSDRERALDDFKTGKVKILIA 525
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 500 HGDREQSDRERALDDFKTGKVKILIA 525
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 500 HGDREQSDRERALDDFKTGKVKILIA 525
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 500 HGDREQSDRERALDDFKTGKVKILIA 525
Score = 56 (24.8 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
++ Q +R+R L++F+ G+ IL++
Sbjct: 502 DREQSDRERALDDFKTGKVKILIA 525
Score = 50 (22.7 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R+R L++F+ G+ IL++
Sbjct: 505 QSDRERALDDFKTGKVKILIA 525
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 662 (238.1 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 145/361 (40%), Positives = 216/361 (59%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHH-DVTVKGRYYLLRLESRPGKCVPRPIQHFEECN 134
I+KN Y T S SQ +V+ + + +V L E RP +P PI FE+
Sbjct: 167 IHKNFYVETKATSSMSQVQVDIWRKENFNVMCND---LKDGEKRP---IPNPICKFEDA- 219
Query: 135 FPPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
F PY +MK I + GFQ PT IQ+Q WPI L G DL+ IA+TG+GKTL Y+ P +H+NS
Sbjct: 220 FGPYPELMKSIKKAGFQKPTPIQSQAWPIVLQGIDLIGIAQTGTGKTLSYLMPGFIHLNS 279
Query: 193 QRPLRSGE--GPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQT 250
Q P+ G+ GP +LVL PTRELA Q+ + + S + C++GG + Q++ +
Sbjct: 280 Q-PVSRGKRNGPGMLVLTPTRELALQVGAECSKY-SYKGLKSVCIYGGGNRKGQIQDIMK 337
Query: 251 GAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVL 310
G +I+IATPGRL D +NL +YLVLDEAD+MLD+GFE QI KI+ +RPDRQ +
Sbjct: 338 GVDIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTI 397
Query: 311 MWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQI 370
M SATWP +++LA +L + + + +G+L+ A + Q + + E EK Q L +
Sbjct: 398 MTSATWPDTIRQLAHSYLKEPMLVYVGTLDLVAVDTVKQNIIITTEEEKRSLFQEFLQSL 457
Query: 371 GSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILV 430
+ K I+FV K ADD++ + +G ++HG++ Q +R+R L++F+ G+ IL+
Sbjct: 458 SPK--DKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDDFKTGKVKILI 515
Query: 431 S 431
+
Sbjct: 516 A 516
Score = 62 (26.9 bits), Expect = 1.2e-69, Sum P(2) = 1.2e-69
Identities = 23/91 (25%), Positives = 43/91 (47%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 647
H ++ Q +R+R L++F+ G+ IL++ S R L+ + V +YN +
Sbjct: 491 HGDREQSDRERALDDFKTGKVKILIATDLAS-----RGLDVSDVTH----VFNYNFPRNI 541
Query: 648 RDRVLNEFRIGRASILVSDFDILRQ--WRIA 676
+ V R GRA + ++ Q W++A
Sbjct: 542 EEYVHRVGRTGRAGKMGESVTLMTQDDWKVA 572
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 491 HGDREQSDRERALDDFKTGKVKILIA 516
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 491 HGDREQSDRERALDDFKTGKVKILIA 516
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 491 HGDREQSDRERALDDFKTGKVKILIA 516
Score = 61 (26.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 9/26 (34%), Positives = 19/26 (73%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q +R+R L++F+ G+ IL++
Sbjct: 491 HGDREQSDRERALDDFKTGKVKILIA 516
Score = 56 (24.8 bits), Expect = 5.3e-69, Sum P(2) = 5.3e-69
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
++ Q +R+R L++F+ G+ IL++
Sbjct: 493 DREQSDRERALDDFKTGKVKILIA 516
Score = 50 (22.7 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R+R L++F+ G+ IL++
Sbjct: 496 QSDRERALDDFKTGKVKILIA 516
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 663 (238.4 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 142/361 (39%), Positives = 215/361 (59%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHHD-VTVKGRYYLLRLESRPGKCVPRPIQHFEECN 134
+ KN Y + ++ E+E ++ +TV Y E +P P+ FE+C
Sbjct: 231 LTKNFYKEAPEVANLTKSEIERIREENNKITVS--YVFEPKEGETSPPIPNPVWTFEQC- 287
Query: 135 FPPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
F Y ++++I +MGF P+ IQ+Q WPI L G D++ IA+TG+GKTL ++ P ++H
Sbjct: 288 FAEYPDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLPGMIHTEY 347
Query: 193 QRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTG 251
Q R G VLVLAPTRELA QIE + S + CV+GG + Q+ L+ G
Sbjct: 348 QSTPRGTRGGANVLVLAPTRELALQIEMEVKKY-SFRGMKAVCVYGGGNRNMQISDLERG 406
Query: 252 AEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLM 311
AEI+I TPGRL D + I++ +YLVLDEADRMLDMGFEPQIRK++ IRPDRQ +M
Sbjct: 407 AEIIICTPGRLNDLIMANVIDVSTITYLVLDEADRMLDMGFEPQIRKVMLDIRPDRQTIM 466
Query: 312 WSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEH-EKDYKLQGLLSQI 370
SATWP V++LA+ ++ + +Q+ +GSL+ A H++ QI+ + ++ +K + + +
Sbjct: 467 TSATWPPGVRRLAQSYMKNPIQVCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNM 526
Query: 371 GSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILV 430
S T K IIF K +ADD++ + G+ IHGN+ Q +R++ + + + G ILV
Sbjct: 527 SS--TDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADIKSGVVRILV 584
Query: 431 S 431
+
Sbjct: 585 A 585
Score = 45 (20.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H N+ Q +R++ + + + G ILV+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVA 585
Score = 45 (20.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H N+ Q +R++ + + + G ILV+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVA 585
Score = 45 (20.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H N+ Q +R++ + + + G ILV+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVA 585
Score = 45 (20.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H N+ Q +R++ + + + G ILV+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVA 585
Score = 45 (20.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H N+ Q +R++ + + + G ILV+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVA 585
Score = 45 (20.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H N+ Q +R++ + + + G ILV+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVA 585
Score = 45 (20.9 bits), Expect = 6.0e-68, Sum P(2) = 6.0e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H N+ Q +R++ + + + G ILV+
Sbjct: 560 HGNRDQMDREQAIADIKSGVVRILVA 585
Score = 40 (19.1 bits), Expect = 2.0e-67, Sum P(2) = 2.0e-67
Identities = 7/24 (29%), Positives = 15/24 (62%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
N+ Q +R++ + + + G ILV+
Sbjct: 562 NRDQMDREQAIADIKSGVVRILVA 585
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 636 (228.9 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
Identities = 140/359 (38%), Positives = 211/359 (58%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNF 135
I KNLY + T S S+ +VE + + ++ L E RP +P+P FE+ F
Sbjct: 153 IKKNLYIESKATHSLSEAQVEIW-RKENFNIRCDD-LTEGEKRP---IPKPTCTFEDA-F 206
Query: 136 PPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQ 193
Y IM+ I GFQ PT IQ+Q WPI L G DL+ IA+TG+GKTL Y+ P +H++SQ
Sbjct: 207 QQYPEIMQSIRRAGFQKPTPIQSQSWPIILQGIDLIGIAQTGTGKTLSYLMPGFIHIHSQ 266
Query: 194 RPLRSGE-GPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
R GP +LVL PTRELA Q+E + + + C++GG + Q++ + G
Sbjct: 267 PVSRKQRNGPGMLVLTPTRELALQVEAECSKY-LYKGLKSVCIYGGGNRKGQIQDVTKGV 325
Query: 253 EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMW 312
+I+IATPGRL D +NL +YLVLDEAD+MLD+GFE QI KI+ +RPDRQ +M
Sbjct: 326 DIIIATPGRLNDLQMNNFVNLRSITYLVLDEADKMLDLGFEHQIMKILLDVRPDRQTVMT 385
Query: 313 SATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGS 372
+A+WP ++LA+ +L + + +G+L+ + + Q + V E EK ++ L +
Sbjct: 386 TASWPDSTRRLAQSYLKQPMIVYVGTLDLVTVNTVKQNIIVTTEEEKRSLVKEFLQSLSP 445
Query: 373 ERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ K I+FV K ADD++ + +G ++HG++ Q +RD+ L +FR GR IL++
Sbjct: 446 K--DKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRVKILIA 502
Score = 70 (29.7 bits), Expect = 9.8e-68, Sum P(2) = 9.8e-68
Identities = 26/94 (27%), Positives = 42/94 (44%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 647
H ++ Q +RD+ L +FR GR IL++ D + + V +YN +
Sbjct: 477 HGDREQSDRDQALEDFRTGRVKILIA--------TDLAARGLDVSDVTH-VYNYNFPRNI 527
Query: 648 RDRVLNEFRIGRASILVSDFDILRQ--WRIAWDE 679
+ V R GRA + ++ Q W+IA DE
Sbjct: 528 EEYVHRVGRTGRAGKIGESITLVTQDDWKIA-DE 560
Score = 66 (28.3 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H ++ Q +RD+ L +FR GR IL++
Sbjct: 477 HGDREQSDRDQALEDFRTGRVKILIA 502
Score = 66 (28.3 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q +RD+ L +FR GR IL++
Sbjct: 477 HGDREQSDRDQALEDFRTGRVKILIA 502
Score = 66 (28.3 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q +RD+ L +FR GR IL++
Sbjct: 477 HGDREQSDRDQALEDFRTGRVKILIA 502
Score = 66 (28.3 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q +RD+ L +FR GR IL++
Sbjct: 477 HGDREQSDRDQALEDFRTGRVKILIA 502
Score = 61 (26.5 bits), Expect = 8.7e-67, Sum P(2) = 8.7e-67
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
++ Q +RD+ L +FR GR IL++
Sbjct: 479 DREQSDRDQALEDFRTGRVKILIA 502
Score = 55 (24.4 bits), Expect = 3.7e-66, Sum P(2) = 3.7e-66
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q RD+ L +FR GR IL++
Sbjct: 482 QSDRDQALEDFRTGRVKILIA 502
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 680 (244.4 bits), Expect = 6.5e-67, P = 6.5e-67
Identities = 145/323 (44%), Positives = 197/323 (60%)
Query: 111 YLLRLESR-PGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLV 169
Y RL R G V RP++ FE+C F IM I + ++ PTAIQ Q PI LSG D++
Sbjct: 210 YRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVI 269
Query: 170 AIAKTGSGKTLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATA 229
IAKTGSGKT ++ P IVH+ Q L+ EGPI ++ APTRELA QI A F A
Sbjct: 270 GIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYG 329
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD 289
RV+ V+GG K Q K L+ G EIV+ATPGRLID L+ + + R SYLVLDEADRM D
Sbjct: 330 LRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFD 389
Query: 290 MGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ 349
+GFEPQ+R I+GQIRPDRQ L++SAT P +V+KLA + L D +++ +G + AN +I Q
Sbjct: 390 LGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPIRVTVGEVG-MANEDITQ 448
Query: 350 IVDVCQEHEKDYKLQGLLSQI-GSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGN 408
+V+V + KL LL ++ G ++F K D+I + + A+HG+
Sbjct: 449 VVNVIPSDAE--KLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGD 506
Query: 409 KSQQERDRVLNEFRIGRASILVS 431
K Q R L +F+ G +L++
Sbjct: 507 KDQASRMETLQKFKSGVHHVLIA 529
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 649 (233.5 bits), Expect = 6.3e-66, Sum P(2) = 6.3e-66
Identities = 138/354 (38%), Positives = 206/354 (58%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T L+ L + G PRP F F
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+ALSG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R SYLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
+++KLA D L+D +++ G + AN ++ QIV++ H K L ++ +S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGS 500
Query: 379 II-FVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ FV K A+++ +++ +G +HG+ Q ER++V+++F+ +LV+
Sbjct: 501 VLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
Score = 43 (20.2 bits), Expect = 6.3e-66, Sum P(2) = 6.3e-66
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + Q ER++V+++F+ +LV+
Sbjct: 529 HGDMDQSERNKVISDFKKKDIPVLVA 554
Score = 43 (20.2 bits), Expect = 6.3e-66, Sum P(2) = 6.3e-66
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + Q ER++V+++F+ +LV+
Sbjct: 529 HGDMDQSERNKVISDFKKKDIPVLVA 554
Score = 43 (20.2 bits), Expect = 6.3e-66, Sum P(2) = 6.3e-66
Identities = 8/26 (30%), Positives = 17/26 (65%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + Q ER++V+++F+ +LV+
Sbjct: 529 HGDMDQSERNKVISDFKKKDIPVLVA 554
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 144/370 (38%), Positives = 221/370 (59%)
Query: 68 WNSMS---MEQINKNLYTPNHLTVSRSQGEVESYLN-HHDVTVKGRYYLLRLESRPGKCV 123
WN + + KN Y + T S SQ +V+++ ++++ L E RP +
Sbjct: 182 WNEKKWAGLPPVKKNFYIESEKTSSMSQEQVDNWRKENYNIICDD---LKDGEKRP---L 235
Query: 124 PRPIQHFEEC-NFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGY 182
P P +FE+ + P +M+ I + GFQ PT IQ+Q WPI L G DL+ +A+TG+GKTL Y
Sbjct: 236 PNPTCNFEDAFHCYPEVMRNIEKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSY 295
Query: 183 IAPAIVHVNSQRPL-RSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
+ P +H++SQ L R+ GP +LVL PTRELA Q++ +++ S + C++GG +
Sbjct: 296 LMPGFIHIDSQPVLQRARNGPGMLVLTPTRELALQVDAECSEY-SYRGLKSVCIYGGGDR 354
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
Q+K L GA+I+IATPGRL D + L +YLVLDEAD+MLDMGFEPQI KI+
Sbjct: 355 DGQIKDLSKGADIIIATPGRLHDLQMNNFVYLKSITYLVLDEADKMLDMGFEPQIMKILL 414
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
+RPDRQ +M SATWP V++LA+ +L + + + +G+L+ A + Q + V E EK
Sbjct: 415 DVRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDEKRS 474
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
+Q + + + K IIFV K AD ++ + + + ++HGN+ Q +R+R L F
Sbjct: 475 HIQAFIDSMSPK--DKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSF 532
Query: 422 RIGRASILVS 431
+ G+ IL++
Sbjct: 533 KTGKVRILIA 542
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 629 (226.5 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 144/359 (40%), Positives = 209/359 (58%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNF 135
I KN Y + T S EVE + ++ + L+ +C+P P+ FE+ F
Sbjct: 192 IEKNFYKESSRTACMSPEEVELWRKENNNIICDD-----LKEGEKRCIPNPVCKFEDV-F 245
Query: 136 PPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQ 193
Y IM I + GFQ PT IQ+Q WPI L G DL+ IA+TG+GKTL Y+ P +H+ SQ
Sbjct: 246 EQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQ 305
Query: 194 R-PLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
P GP +LVLAPTRELA Q+E + + + C++GG + Q+ + G
Sbjct: 306 PIPKDKRGGPGMLVLAPTRELALQVEAECLKY-TYKGFKSICIYGGGDRKAQINVVTKGV 364
Query: 253 EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMW 312
+IVIATPGRL D INL +YL +EADRMLDMGFEPQI KI+ +RPDRQ +M
Sbjct: 365 DIVIATPGRLNDLQMNNFINLKSITYLA-NEADRMLDMGFEPQIMKILIDVRPDRQTVMM 423
Query: 313 SATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGS 372
SATWP V++LA+ +L + + + +G+L+ A + + Q V V E EK ++ + +
Sbjct: 424 SATWPDGVRRLAKSYLRNPMIVYVGTLDLAAVNTVEQKVIVINEEEKKAFMENFIDSMKP 483
Query: 373 ERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ K IIFV K ADDI + +G ++HG++ Q +R++ L++F+ G+ ILV+
Sbjct: 484 K--DKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVA 540
Score = 41 (19.5 bits), Expect = 6.1e-64, Sum P(2) = 6.1e-64
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R++ L++F+ G+ ILV+
Sbjct: 520 QCDREQALDDFKKGKVRILVA 540
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 660 (237.4 bits), Expect = 7.1e-64, P = 7.1e-64
Identities = 132/318 (41%), Positives = 198/318 (62%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP+P+Q + +C + I ++GF + T+IQAQ P +SG D++ +AKTGSGKT
Sbjct: 533 GLDVPKPVQKWSQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKT 592
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGA 239
+ ++ P H+ QRPL + EGPI L++ PTRELA QI F A R C +GGA
Sbjct: 593 MAFLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGA 652
Query: 240 PKGPQVKALQTGAEIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQI 296
P Q+ L+ GAEI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+
Sbjct: 653 PIKDQIAELKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQV 712
Query: 297 RKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQE 356
KI+ +RPDRQ +++SAT+P+ ++ LA L +++ +G + A I QIV+VC E
Sbjct: 713 MKILSNVRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGRSVVAPE-ITQIVEVCNE 771
Query: 357 HEKDYKLQGLLSQIGS---ERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQE 413
+K +L LL + S ++++IFV+ + AD + R + KG+ ++IHG K Q +
Sbjct: 772 EKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQID 831
Query: 414 RDRVLNEFRIGRASILVS 431
RD + +F+ G +L++
Sbjct: 832 RDSTIEDFKAGIFPVLIA 849
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 147/370 (39%), Positives = 217/370 (58%)
Query: 68 WNSMSMEQINKNLYTPNHLTVSRSQGEVESYLN-HHDVTVKGRYYLLRLESRPGKCVPRP 126
W + + I KN Y + +T S SQ +V+++ ++++ L E RP +P P
Sbjct: 187 WAGLPL--IKKNFYMESEITSSMSQEQVQNWRKENYNIMCDD---LKDGEKRP---IPNP 238
Query: 127 IQHFEEC-NFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
FE+ P +M I + GFQ PT IQ+Q WPI L G DL+ +A+TG+GKTL Y+ P
Sbjct: 239 ACKFEDAFQCYPEVMINIKKAGFQKPTPIQSQAWPIILQGIDLIGVAQTGTGKTLSYLMP 298
Query: 186 AIVHVNSQRPL----RSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPK 241
+HV+SQ + R+ GP +LVL PTRELA Q+E + + S + CV+GG +
Sbjct: 299 GFIHVDSQPVVFSLQRARNGPGMLVLTPTRELALQVEAECSKY-SYKGLKSVCVYGGGDR 357
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
Q+K L G +I+IATPGRL D + L SYLVLDEAD+MLDMGFEPQI KI+
Sbjct: 358 DGQIKDLLKGVDIIIATPGRLNDLQMNNFVYLKSISYLVLDEADKMLDMGFEPQIMKILL 417
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
IRPDRQ +M SATWP V++LA+ +L + + + +G+L+ A + Q + V E EK
Sbjct: 418 DIRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDEKRS 477
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
+Q + + + K IIFV K AD ++ + + + ++HGN+ Q +R+R L F
Sbjct: 478 HIQTFIESMSPK--DKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNF 535
Query: 422 RIGRASILVS 431
+ G+ IL++
Sbjct: 536 KTGKVRILIA 545
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 656 (236.0 bits), Expect = 8.2e-64, P = 8.2e-64
Identities = 131/316 (41%), Positives = 197/316 (62%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
GK VP+P+Q + C I+ I ++ + PTAIQ Q P+ +SG D+V +AKTGSGKT
Sbjct: 370 GKDVPKPVQKWSLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKT 429
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGA 239
+ ++ P H+ Q P++ EGPI L+L PTRELA QI F R C +GG
Sbjct: 430 MAFLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGP 489
Query: 240 PKGPQVKALQTGAEIVIATPGRLIDYL--EQG-TINLHRTSYLVLDEADRMLDMGFEPQI 296
P Q+ L+ GAEIV+AT GR+ID L QG ++L RT+Y+VLDEADRM DMGFEPQ+
Sbjct: 490 PIKDQIADLKRGAEIVVATTGRMIDLLAANQGRVVSLRRTTYIVLDEADRMFDMGFEPQV 549
Query: 297 RKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQE 356
KI +RPDRQ +++SAT PK + L + L + V++ +G + A+ I QIV++ E
Sbjct: 550 MKIFANVRPDRQTVLFSATMPKIMDALVKKVLKNPVEIEVGGKSVVASE-ITQIVEIRDE 608
Query: 357 HEKDYKLQGLLSQIGSERTS-KTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERD 415
K +L LL ++ + +++IFVE + KAD++ R + KG+ +++HG K Q +RD
Sbjct: 609 KSKFNRLLELLGELYKDDDDVRSLIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRD 668
Query: 416 RVLNEFRIGRASILVS 431
+++F+ G ++++
Sbjct: 669 STISDFKSGVCPVMIA 684
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 652 (234.6 bits), Expect = 1.1e-63, P = 1.1e-63
Identities = 138/353 (39%), Positives = 204/353 (57%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T L+ L + G PRP F F
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+ALSG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R SYLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
+++KLA D L+D +++ G + AN ++ QIV++ K L L + S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEILHSGSKWNWLTRRLVEFTS--SGSV 500
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++FV K A+++ +++ +G +HG+ Q ER++V+++F+ +LV+
Sbjct: 501 LLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 553
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 623 (224.4 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 135/360 (37%), Positives = 210/360 (58%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHH-DVTVKGRYYLLRLESRPGKCVPRPIQHFEECN 134
+ KN Y + T S+ +V ++ + ++T L+S + +P+P F++
Sbjct: 174 VKKNFYIESKATSCMSEMQVINWRKENFNITCDD------LKSGEKRLIPKPTCRFKDA- 226
Query: 135 FPPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
F Y ++K I +G PT IQ+Q WPI L G DL+ +A+TG+GKTL Y+ P +H++S
Sbjct: 227 FQQYPDLLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDS 286
Query: 193 QRPLRSGE-GPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTG 251
Q R GP +LVL PTRELA +E + + S + C++GG + Q++ + G
Sbjct: 287 QPISREQRNGPGMLVLTPTRELALHVEAECSKY-SYKGLKSICIYGGRNRNGQIEDISKG 345
Query: 252 AEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLM 311
+I+IATPGRL D ++NL +YLV+DEAD+MLDM FEPQIRKI+ +RPDRQ +M
Sbjct: 346 VDIIIATPGRLNDLQMNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVM 405
Query: 312 WSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIG 371
SATWP V++LA +L D + + +G+LN A + + Q + V E EK Q + +
Sbjct: 406 TSATWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMS 465
Query: 372 SERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
K I+FV K ADD++ +G +A ++HGN Q +++R + +F+ G IL++
Sbjct: 466 PN--DKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILIT 523
Score = 44 (20.5 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 454 ILVSQYKESQQKRDR 468
++ QYK +QQKR R
Sbjct: 599 VMAEQYKLNQQKRHR 613
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 650 (233.9 bits), Expect = 1.5e-63, P = 1.5e-63
Identities = 138/354 (38%), Positives = 206/354 (58%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T L+ L + G PRP F F
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+ALSG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R SYLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
+++KLA D L+D +++ G + AN ++ QIV++ H K L ++ +S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGS 500
Query: 379 II-FVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ FV K A+++ +++ +G +HG+ Q ER++V+++F+ +LV+
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 650 (233.9 bits), Expect = 1.6e-63, P = 1.6e-63
Identities = 138/354 (38%), Positives = 206/354 (58%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T L+ L + G PRP F F
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+ALSG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R SYLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
+++KLA D L+D +++ G + AN ++ QIV++ H K L ++ +S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGS 500
Query: 379 II-FVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ FV K A+++ +++ +G +HG+ Q ER++V+++F+ +LV+
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 650 (233.9 bits), Expect = 1.8e-63, P = 1.8e-63
Identities = 138/354 (38%), Positives = 206/354 (58%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T L+ L + G PRP F F
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+ALSG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R SYLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
+++KLA D L+D +++ G + AN ++ QIV++ H K L ++ +S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGS 500
Query: 379 II-FVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ FV K A+++ +++ +G +HG+ Q ER++V+++F+ +LV+
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 652 (234.6 bits), Expect = 2.3e-63, P = 2.3e-63
Identities = 126/312 (40%), Positives = 196/312 (62%)
Query: 124 PRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYI 183
P+P+ + +C + I +G++ PT+IQAQ P SG D++ +AKTGSGKT+ ++
Sbjct: 414 PKPVTSWSQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFL 473
Query: 184 APAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGP 243
P H+ QRPL++GEGPI +++ PTRELA QI F R C +GGAP
Sbjct: 474 LPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAPIKD 533
Query: 244 QVKALQTGAEIVIATPGRLIDYLEQ--GTI-NLHRTSYLVLDEADRMLDMGFEPQIRKII 300
Q+ L+ GAEIV+ TPGR+ID L G + NLHR +YLVLDEADRM D+GFEPQ+ +II
Sbjct: 534 QIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGFEPQVMRII 593
Query: 301 GQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD 360
IRPDRQ +++SAT+P+ ++ LA L V++ +G + A+ + QIV+V E K
Sbjct: 594 NNIRPDRQTVLFSATFPRAMEALARKVLKKPVEITVGGRSVVASE-VEQIVEVRPEESKF 652
Query: 361 YKLQGLLSQIGSERTS-KTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLN 419
+L LL ++ + + +T++FV+ + AD + + +G+ + +IHG K Q +RD ++
Sbjct: 653 SRLLELLGELYNNQLDVRTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTIS 712
Query: 420 EFRIGRASILVS 431
+++ G +L++
Sbjct: 713 DYKAGVFDVLIA 724
>TAIR|locus:2034481 [details] [associations]
symbol:STRS1 "STRESS RESPONSE SUPPRESSOR 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0001510
"RNA methylation" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
EMBL:AC079041 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811
OMA:DRILVFC EMBL:AC074309 EMBL:AY080680 EMBL:AY117298 EMBL:AJ010458
IPI:IPI00547293 PIR:A86444 PIR:T51739 RefSeq:NP_174479.1
UniGene:At.20258 ProteinModelPortal:Q9C551 SMR:Q9C551 STRING:Q9C551
PaxDb:Q9C551 PRIDE:Q9C551 EnsemblPlants:AT1G31970.1 GeneID:840087
KEGG:ath:AT1G31970 GeneFarm:911 TAIR:At1g31970 InParanoid:Q9C551
PhylomeDB:Q9C551 ProtClustDB:CLSN2682598 Genevestigator:Q9C551
GermOnline:AT1G31970 Uniprot:Q9C551
Length = 537
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 131/310 (42%), Positives = 197/310 (63%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
++ F E N P ++ F+ P+ IQ+ WP L G DL+ IAKTGSGKTL + PA
Sbjct: 115 LKTFAESNLPENVLDCCKT--FEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPA 172
Query: 187 IVHV-NSQRPLRSGE---GPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKG 242
I+HV + + G P LVL+PTRELA QI V + G + CV+GG+ KG
Sbjct: 173 IMHVLKKNKKIGGGSKKVNPTCLVLSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKG 232
Query: 243 PQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ 302
PQ+ A+++G +IVI TPGRL D +E + L S++VLDEADRMLDMGFE +R I+
Sbjct: 233 PQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEPVRFILSN 292
Query: 303 IRPDRQVLMWSATWPKEVQKLAEDFL-VDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
RQ++M+SATWP +V KLA++F+ + +++ IGS++ ANH+++QI++V E +D
Sbjct: 293 TNKVRQMVMFSATWPLDVHKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQ 352
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
+L LL + + ++ ++F K +A+ + R ++ +GW AV+IHGNK+Q ER R L+ F
Sbjct: 353 RLIALLEKYHKSQKNRVLVFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLF 412
Query: 422 RIGRASILVS 431
+ G +LV+
Sbjct: 413 KEGSCPLLVA 422
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 645 (232.1 bits), Expect = 3.5e-63, P = 3.5e-63
Identities = 140/355 (39%), Positives = 207/355 (58%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + S E Y H +++ ++ L + G P+P F F
Sbjct: 208 DHSEIDYSPFEKNFYNEHEEISSLTGAEVVELRRKLNLKVSGAAPPKPATSFAHFGFDEQ 267
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG PIALSG D + IAKTGSGKT +I P +VH+ Q+ L
Sbjct: 268 LMHQIRKSEYTQPTPIQCQGVPIALSGRDAIGIAKTGSGKTAAFIWPILVHIMDQKELEP 327
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
GEGPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 328 GEGPIAVIVCPTRELCQQIHAECKRFGKAYGLRSVAVYGGGSMWEQAKALQEGAEIVVCT 387
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ +L R ++LV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 388 PGRLIDHVKKKATSLQRVTFLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 447
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTS-- 376
+++KLA D LVD +++ G + AN +I QIV+V Q + + G L++ E TS
Sbjct: 448 KIEKLARDILVDPIRVVQGDIGE-ANEDITQIVEVLQSGQDKW---GWLTRRLVEFTSAG 503
Query: 377 KTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++FV K +++ ++ +G++ +HG+ Q ER++V+ +F+ +LV+
Sbjct: 504 SVLVFVTKKANCEELATNLIQEGYSLGLLHGDMDQSERNKVIADFKKKNLPVLVA 558
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 647 (232.8 bits), Expect = 3.8e-63, P = 3.8e-63
Identities = 139/354 (39%), Positives = 207/354 (58%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYY----LLRLESR-PGKCVPRPIQHFEECNFPPY 138
+H + R+ E++ N D + L SR G PRP F F
Sbjct: 204 DHSELDRNYFEIKIIYNTKDECIDASNLELINTLHFISRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+ALSG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R SYLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
+++KLA D L+D +++ G + AN ++ QIV++ H K L ++ +S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGS 500
Query: 379 II-FVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ FV K A+++ +++ +G +HG+ Q ER++V+++F+ +LV+
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVA 554
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 646 (232.5 bits), Expect = 4.1e-63, P = 4.1e-63
Identities = 138/354 (38%), Positives = 205/354 (57%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T L+ L + G PRP F F
Sbjct: 204 DHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+ALSG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R SYLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVSYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
+++KLA D L+D +++ G + AN ++ QIV++ H K L ++ +S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIL--HSGPSKWNWLTRRLVEFTSSGS 500
Query: 379 II-FVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ FV K A+++ +++ +G +HG+ Q ER++V+ +F+ +LV+
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVA 554
>DICTYBASE|DDB_G0293064 [details] [associations]
symbol:DDB_G0293064 species:44689 "Dictyostelium
discoideum" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0293064 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AAFI02000199
RefSeq:XP_629301.1 ProteinModelPortal:Q54CB8
EnsemblProtists:DDB0191757 GeneID:8629024 KEGG:ddi:DDB_G0293064
InParanoid:Q54CB8 OMA:VLYWSAT Uniprot:Q54CB8
Length = 573
Score = 618 (222.6 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 147/377 (38%), Positives = 212/377 (56%)
Query: 64 RTPNWNS--MSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVK--GRYYLLRLESRP 119
R NW+ +M I K L + Q E ++ ++++K +YL
Sbjct: 87 REINWDDELKNMAPIRKRLID----LPTEDQQETMDFIKEFEISIKKENNFYL------- 135
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
P+PI E F I K F+ PT +Q+ GWPIALSG D++ I+KTGSGKT
Sbjct: 136 ----PKPIDTIESVPFQSTI-KNFLSKKFEKPTPVQSLGWPIALSGSDMLGISKTGSGKT 190
Query: 180 LGYIAPAIVHVNSQRPLRSG-EGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGG 238
L +I PAI H+ +Q P +S GP VLV+APTRELA QI A + +A ++GG
Sbjct: 191 LSFILPAIEHILAQ-PRQSYYPGPSVLVVAPTRELANQINQEAEQYLRLVNIEIATIYGG 249
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
AP+ Q L +IV+ TPGR+ID++E G ++L S+LV+DEADR+++MGFE QI
Sbjct: 250 APRRSQQLQLSRRPKIVVGTPGRIIDFMESGDLSLKNISFLVVDEADRLMEMGFEQQIDG 309
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQ-EH 357
I IRPDRQVL WSATWPK+V AE + ++L IGS TAN NI Q + +
Sbjct: 310 IFNSIRPDRQVLYWSATWPKKVSSFAEKHIRTPIRLQIGSSQLTANKNISQKFKIVPTDA 369
Query: 358 EKDYKLQGLLSQIGS-ERTSKTIIFVETKRKADDITRSVRNKG--WAAVAIHGNKSQQER 414
+K L L +I S + ++T+IF TK+ AD + +++ G +HG+ Q R
Sbjct: 370 DKVDALMDTLGEIYSADEKAQTLIFTMTKKGADTLKHYIQSNGDNVRIDTLHGDVDQNRR 429
Query: 415 DRVLNEFRIGRASILVS 431
+R++ +F+ R I+V+
Sbjct: 430 ERIVQDFKNKRLDIVVA 446
Score = 44 (20.5 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H + Q R+R++ +F+ R I+V+
Sbjct: 421 HGDVDQNRRERIVQDFKNKRLDIVVA 446
Score = 44 (20.5 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H + Q R+R++ +F+ R I+V+
Sbjct: 421 HGDVDQNRRERIVQDFKNKRLDIVVA 446
Score = 44 (20.5 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + Q R+R++ +F+ R I+V+
Sbjct: 421 HGDVDQNRRERIVQDFKNKRLDIVVA 446
Score = 44 (20.5 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + Q R+R++ +F+ R I+V+
Sbjct: 421 HGDVDQNRRERIVQDFKNKRLDIVVA 446
Score = 44 (20.5 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + Q R+R++ +F+ R I+V+
Sbjct: 421 HGDVDQNRRERIVQDFKNKRLDIVVA 446
Score = 44 (20.5 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + Q R+R++ +F+ R I+V+
Sbjct: 421 HGDVDQNRRERIVQDFKNKRLDIVVA 446
Score = 44 (20.5 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + Q R+R++ +F+ R I+V+
Sbjct: 421 HGDVDQNRRERIVQDFKNKRLDIVVA 446
Score = 42 (19.8 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q +R+R++ +F+ R I+V+
Sbjct: 426 QNRRERIVQDFKNKRLDIVVA 446
Score = 40 (19.1 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
Identities = 7/21 (33%), Positives = 14/21 (66%)
Query: 437 QQERDRVLNEFRIGRASILVS 457
Q R+R++ +F+ R I+V+
Sbjct: 426 QNRRERIVQDFKNKRLDIVVA 446
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 612 (220.5 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 140/361 (38%), Positives = 211/361 (58%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNF 135
I KN Y + T S EVE + ++ + L+ +C+P P+ FE+ F
Sbjct: 5 IEKNFYKESSRTACMSPEEVELWRKENNNIICDD-----LKEGEKRCIPNPVCKFEDV-F 58
Query: 136 PPY--IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQ 193
Y IM I + GFQ PT IQ+Q WPI L G DL+ IA+TG+GKTL Y+ P +H+ SQ
Sbjct: 59 EQYPDIMANIRKTGFQKPTPIQSQAWPIILQGIDLIGIAQTGTGKTLAYLMPGFIHLASQ 118
Query: 194 R-PLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
P GP +LVLAPTRELA Q+E + + + C++GG + Q+ + G
Sbjct: 119 PIPKDKRGGPGMLVLAPTRELALQVEAECLKY-TYKGFKSICIYGGGDRKAQINVVTKGV 177
Query: 253 EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMW 312
+IVIATPGRL D INL +YLVLDEADRMLDMGFEPQI KI+ +RPDRQ +M
Sbjct: 178 DIVIATPGRLNDLQMNNFINLKSITYLVLDEADRMLDMGFEPQIMKILIDVRPDRQTVMM 237
Query: 313 SATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGS 372
SATWP V++LA+ +L + + + +G+L+ + +++ + + +KD + Q+ +
Sbjct: 238 SATWPDGVRRLAKSYLRNPMIVYVGTLDLAVSGVVLKYL----QFDKDIFTWKYM-QVNA 292
Query: 373 ER--TSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILV 430
+ T ++FV+ ADDI + +G ++HG++ Q +R++ L++F+ G+ ILV
Sbjct: 293 QSFCTDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILV 352
Query: 431 S 431
+
Sbjct: 353 A 353
Score = 47 (21.6 bits), Expect = 8.8e-63, Sum P(2) = 8.8e-63
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
++ Q +R++ L++F+ G+ ILV+
Sbjct: 330 DREQCDREQALDDFKKGKVRILVA 353
Score = 41 (19.5 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R++ L++F+ G+ ILV+
Sbjct: 333 QCDREQALDDFKKGKVRILVA 353
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 641 (230.7 bits), Expect = 2.7e-62, P = 2.7e-62
Identities = 172/494 (34%), Positives = 253/494 (51%)
Query: 75 QINKNLYTPNHLTVSRSQGEVESYLNHHD-VTVKGRYYLLRLESRPGKCVPRPIQHFEEC 133
+ KN Y ++ EV++Y D +TVKG ++ C P+PI+ + +C
Sbjct: 262 KFKKNFYIETEEIRRMTKAEVKAYREELDSITVKG------ID-----C-PKPIKTWAQC 309
Query: 134 NFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQ 193
+M + + + PT+IQAQ P +SG D++ IAKTGSGKTL ++ P H+ Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 194 RPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAE 253
L G+GPI ++LAPTRELA Q AN F +VAC +GG Q+ L+ GAE
Sbjct: 370 PELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADLKRGAE 429
Query: 254 IVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVL 310
IV+ TPGR+ID L G + NL R +YLVLDEADRM D GFEPQI K++ IRPD+Q +
Sbjct: 430 IVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIRPDKQTV 489
Query: 311 MWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQI 370
++SAT+P+ ++ LA L V++ +G + + +I Q +C EH+K KL LL
Sbjct: 490 LFSATFPRHMEALARKVLDKPVEILVGGKSVVCS-DITQNAVICAEHQKFLKLLELLGMY 548
Query: 371 GSERTSKTIIFVETKRKADDITRSVRNKGWAAVA-IHGNKSQQERDRVLNEFRIGRASIL 429
E +S I+FV+ + KADDI + G+ +VA +HG Q +RD + +F+ G +L
Sbjct: 549 YEEGSS--IVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVL 606
Query: 430 VSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRAS--------IL 481
V+ + + + D V N ILV Y D V R GRA +L
Sbjct: 607 VAT-SVAARGLD-VKN-------LILVVNYDCPNHYEDYVHRVGRTGRAGRKGYAYTFVL 657
Query: 482 VSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQ 541
H K E R + L + + + + E E ++G S Y +
Sbjct: 658 PEHQEKMAGEICRAFETAGCKPPADLKAMFERFKSEMAAEGKEVKLGGKGFEGSGYKYDE 717
Query: 542 QERDRVLNEFRIGR 555
E + N+ R+ R
Sbjct: 718 GEAEADANKKRMTR 731
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 589 (212.4 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 139/357 (38%), Positives = 207/357 (57%)
Query: 91 SQGEVESYLNHHDVTVKG--RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGF 148
+ G + +N + TV Y + +E+ G VP P+ F E + + I +
Sbjct: 108 NDGNADPAVNEQENTVINFEAYEDIPIETS-GDNVPPPVNTFAEIDLGEALNLNIQRCKY 166
Query: 149 QAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIV------HVNSQRPLRSGEGP 202
PT +Q PI +G DL+A A+TGSGKT + P I H+ R +R G P
Sbjct: 167 VKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVR-GVYP 225
Query: 203 IVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRL 262
+ ++L+PTRELA QI A F T +V +GG P Q++ L+ G +I++ATPGRL
Sbjct: 226 LAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQIRELERGVDILVATPGRL 285
Query: 263 IDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI-RPD---RQVLMWSATWPK 318
D LE+G ++L +L LDEADRMLDMGFEPQIRKI+ Q+ P RQ +++SAT+P+
Sbjct: 286 NDLLERGRVSLQMVRFLALDEADRMLDMGFEPQIRKIVQQMDMPPPGVRQTMLFSATFPR 345
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS---QIGSE-R 374
E+Q+LA DFL +Y+ L +G + + + IVQ V+ + +K L LL + G++ +
Sbjct: 346 EIQRLASDFLSNYIFLAVGRVGSSTDL-IVQRVEFVHDSDKRSHLMDLLHAQRENGNQGK 404
Query: 375 TSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ T++FVETK+ AD + + G+ A IHG++SQQER+ L F+ GR ILV+
Sbjct: 405 QALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVA 461
Score = 65 (27.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQQER+ L F+ GR ILV+
Sbjct: 436 HGDRSQQEREVALRSFKTGRTPILVA 461
Score = 65 (27.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQQER+ L F+ GR ILV+
Sbjct: 436 HGDRSQQEREVALRSFKTGRTPILVA 461
Score = 65 (27.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQQER+ L F+ GR ILV+
Sbjct: 436 HGDRSQQEREVALRSFKTGRTPILVA 461
Score = 65 (27.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQQER+ L F+ GR ILV+
Sbjct: 436 HGDRSQQEREVALRSFKTGRTPILVA 461
Score = 65 (27.9 bits), Expect = 2.9e-62, Sum P(2) = 2.9e-62
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQQER+ L F+ GR ILV+
Sbjct: 436 HGDRSQQEREVALRSFKTGRTPILVA 461
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 135/354 (38%), Positives = 204/354 (57%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T ++ L + G PRP F F
Sbjct: 199 DHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 258
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+A+SG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 259 LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 318
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI + FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 319 GDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 378
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R +YLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 379 PGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 438
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK-LQGLLSQIGSERTSK 377
+++KLA D L+D +++ G + AN ++ QIV++ + L L + S +
Sbjct: 439 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIFPSGPSKWNWLTRRLVEFTS--SGS 495
Query: 378 TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++FV K A+++ +++ + +HG+ Q ER++V++EF+ ILV+
Sbjct: 496 VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVA 549
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 641 (230.7 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 138/362 (38%), Positives = 206/362 (56%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y SQ EV + L +TVKG+ G C P+PI+ + +
Sbjct: 329 EPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGK----------G-C-PKPIKSWVQ 376
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ Q P +SG DL+ IAKTGSGKT+ ++ P H+
Sbjct: 377 CGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD 436
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 437 QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 556
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E +K KL LL
Sbjct: 557 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGH 615
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 616 Y--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query: 430 VS 431
V+
Sbjct: 674 VA 675
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 641 (230.7 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 138/362 (38%), Positives = 206/362 (56%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y SQ EV + L +TVKG+ G C P+PI+ + +
Sbjct: 329 EPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGK----------G-C-PKPIKSWVQ 376
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ Q P +SG DL+ IAKTGSGKT+ ++ P H+
Sbjct: 377 CGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD 436
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 437 QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 556
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E +K KL LL
Sbjct: 557 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGH 615
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 616 Y--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query: 430 VS 431
V+
Sbjct: 674 VA 675
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 641 (230.7 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 138/362 (38%), Positives = 206/362 (56%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y SQ EV + L +TVKG+ G C P+PI+ + +
Sbjct: 329 EPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGK----------G-C-PKPIKSWVQ 376
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ Q P +SG DL+ IAKTGSGKT+ ++ P H+
Sbjct: 377 CGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD 436
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 437 QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 556
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E +K KL LL
Sbjct: 557 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGH 615
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 616 Y--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query: 430 VS 431
V+
Sbjct: 674 VA 675
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 641 (230.7 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 138/362 (38%), Positives = 206/362 (56%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y SQ EV + L +TVKG+ G C P+PI+ + +
Sbjct: 329 EPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGK----------G-C-PKPIKSWVQ 376
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ Q P +SG DL+ IAKTGSGKT+ ++ P H+
Sbjct: 377 CGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD 436
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 437 QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 556
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E +K KL LL
Sbjct: 557 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGH 615
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 616 Y--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query: 430 VS 431
V+
Sbjct: 674 VA 675
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 641 (230.7 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 138/362 (38%), Positives = 206/362 (56%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y SQ EV + L +TVKG+ G C P+PI+ + +
Sbjct: 329 EPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGK----------G-C-PKPIKSWVQ 376
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ Q P +SG DL+ IAKTGSGKT+ ++ P H+
Sbjct: 377 CGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD 436
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 437 QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 556
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E +K KL LL
Sbjct: 557 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGH 615
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 616 Y--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query: 430 VS 431
V+
Sbjct: 674 VA 675
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 641 (230.7 bits), Expect = 4.3e-62, P = 4.3e-62
Identities = 138/362 (38%), Positives = 206/362 (56%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y SQ EV + L +TVKG+ G C P+PI+ + +
Sbjct: 329 EPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGK----------G-C-PKPIKSWVQ 376
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ Q P +SG DL+ IAKTGSGKT+ ++ P H+
Sbjct: 377 CGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD 436
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 437 QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 556
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E +K KL LL
Sbjct: 557 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGH 615
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 616 Y--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query: 430 VS 431
V+
Sbjct: 674 VA 675
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 588 (212.0 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 142/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 161 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 219
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + S P LR+ G G PI LVLAPTRELA
Sbjct: 220 MACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAV 279
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 280 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 339
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 340 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 399
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 400 IFLAVGRVGSTSE-NITQKVVWVEESDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 456
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 457 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 588 (212.0 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 142/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 162 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 220
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + S P LR+ G G PI LVLAPTRELA
Sbjct: 221 MACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAV 280
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 281 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 340
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 341 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 400
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 401 IFLAVGRVGSTSE-NITQKVVWVEESDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 457
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 458 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 588 (212.0 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 142/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 162 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 220
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + S P LR+ G G PI LVLAPTRELA
Sbjct: 221 MACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAV 280
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 281 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 340
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 341 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 400
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 401 IFLAVGRVGSTSE-NITQKVVWVEESDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 457
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 458 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 588 (212.0 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 142/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 162 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 220
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + S P LR+ G G PI LVLAPTRELA
Sbjct: 221 MACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAV 280
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 281 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 340
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 341 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 400
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 401 IFLAVGRVGSTSE-NITQKVVWVEESDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 457
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 458 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 4.8e-62, Sum P(2) = 4.8e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 587 (211.7 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 141/340 (41%), Positives = 204/340 (60%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C PR I+ F + IM I + PT +Q PI DL
Sbjct: 163 KYDDIPVEATGNNC-PRHIESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 221
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P L++ G G PI LVLAPTRELA
Sbjct: 222 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAV 281
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 282 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 341
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 342 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 401
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 402 IFLAVGRVGSTSE-NITQKVVWVEESDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 458
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 459 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 498
Score = 64 (27.6 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 473 HGDRSQRDREEALHQFRSGKSPILVA 498
Score = 64 (27.6 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 473 HGDRSQRDREEALHQFRSGKSPILVA 498
Score = 64 (27.6 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 473 HGDRSQRDREEALHQFRSGKSPILVA 498
Score = 64 (27.6 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 473 HGDRSQRDREEALHQFRSGKSPILVA 498
Score = 64 (27.6 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 473 HGDRSQRDREEALHQFRSGKSPILVA 498
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 636 (228.9 bits), Expect = 7.2e-62, P = 7.2e-62
Identities = 135/354 (38%), Positives = 204/354 (57%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T ++ L + G PRP F F
Sbjct: 204 DHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFARFGFDEQ 263
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+A+SG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 264 LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 323
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI + FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 324 GDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 383
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R +YLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 384 PGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 443
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK-LQGLLSQIGSERTSK 377
+++KLA D L+D +++ G + AN ++ QIV++ + L L + S +
Sbjct: 444 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIFPSGPSKWNWLTRRLVEFTS--SGS 500
Query: 378 TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++FV K A+++ +++ + +HG+ Q ER++V++EF+ ILV+
Sbjct: 501 VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVA 554
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 636 (228.9 bits), Expect = 7.4e-62, P = 7.4e-62
Identities = 135/354 (38%), Positives = 204/354 (57%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESR-----PGKCVPRPIQHFEECNFPPY 138
+H + E Y H ++T ++ L + G PRP F F
Sbjct: 206 DHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSFAHFGFDEQ 265
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+M +I + + PT IQ QG P+A+SG D++ IAKTGSGKT +I P ++H+ Q+ L
Sbjct: 266 LMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLIHIMDQKELEP 325
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI +++ PTREL QQI + FG A R V+GG Q KALQ GAEIV+ T
Sbjct: 326 GDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGGGSMWEQAKALQEGAEIVVCT 385
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID++++ NL R +YLV DEADRM DMGFE Q+R I +RPDRQ L++SAT+ K
Sbjct: 386 PGRLIDHVKKKATNLQRVTYLVFDEADRMFDMGFEYQVRSIASHVRPDRQTLLFSATFRK 445
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK-LQGLLSQIGSERTSK 377
+++KLA D L+D +++ G + AN ++ QIV++ + L L + S +
Sbjct: 446 KIEKLARDILIDPIRVVQGDIGE-ANEDVTQIVEIFPSGPSKWNWLTRRLVEFTS--SGS 502
Query: 378 TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++FV K A+++ +++ + +HG+ Q ER++V++EF+ ILV+
Sbjct: 503 VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVA 556
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 590 (212.7 bits), Expect = 8.0e-62, Sum P(3) = 8.0e-62
Identities = 131/340 (38%), Positives = 197/340 (57%)
Query: 98 YLNHHDVT--VKGRYYLLR--LESR-PGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPT 152
Y H D+ + + + +R L+ R G + P+ F F +++ I + + PT
Sbjct: 270 YEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSFGHYGFDDILLQAIAKQSIETPT 329
Query: 153 AIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRE 212
IQ Q PIALSG DL+AIAKTGSGKT +I P+I H+ Q L G+GPI L LAPTRE
Sbjct: 330 PIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSISHIMDQPYLEKGDGPIALFLAPTRE 389
Query: 213 LAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTIN 272
LA QI + + ++GG K Q K L+ G EI++ATPGRLID ++
Sbjct: 390 LAHQIYLETLKYSKYFKLKTTVLYGGVSKQQQCKELKAGCEIIVATPGRLIDMIKLKATK 449
Query: 273 LHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYV 332
L+R SYLVLDEAD+M D GF PQ+ I+ +RPDRQ L++SAT+ V++ A L D +
Sbjct: 450 LNRVSYLVLDEADKMFDFGFGPQVLSIVNHVRPDRQTLLFSATFKPNVEEFARTILSDPI 509
Query: 333 QLNIGSLNPTANHNIVQIVDVCQEHEKDYK-LQGLLSQIGSERTSKTIIFVETKRKADDI 391
+++IG + +AN +I QIV V + + L L+ + S+ +IFV TK + +
Sbjct: 510 KISIGMIG-SANSDITQIVQVLKSDSDKWNWLTNQLALLLSQ--GSVLIFVSTKVAVEQL 566
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++ G+ +HG+K+Q ER + + F+ G+ +IL++
Sbjct: 567 SSNLTKFGFQTCTLHGDKNQIERSQTIQTFKEGKINILIA 606
Score = 51 (23.0 bits), Expect = 8.0e-62, Sum P(3) = 8.0e-62
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +K+Q ER + + F+ G+ +IL++
Sbjct: 581 HGDKNQIERSQTIQTFKEGKINILIA 606
Score = 51 (23.0 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +K+Q ER + + F+ G+ +IL++
Sbjct: 581 HGDKNQIERSQTIQTFKEGKINILIA 606
Score = 51 (23.0 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +K+Q ER + + F+ G+ +IL++
Sbjct: 581 HGDKNQIERSQTIQTFKEGKINILIA 606
Score = 51 (23.0 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +K+Q ER + + F+ G+ +IL++
Sbjct: 581 HGDKNQIERSQTIQTFKEGKINILIA 606
Score = 51 (23.0 bits), Expect = 2.1e-59, Sum P(2) = 2.1e-59
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +K+Q ER + + F+ G+ +IL++
Sbjct: 581 HGDKNQIERSQTIQTFKEGKINILIA 606
Score = 46 (21.3 bits), Expect = 2.7e-61, Sum P(3) = 2.7e-61
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+K+Q ER + + F+ G+ +IL++
Sbjct: 583 DKNQIERSQTIQTFKEGKINILIA 606
Score = 42 (19.8 bits), Expect = 8.0e-62, Sum P(3) = 8.0e-62
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 561 SHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKS 618
S+YN S + N + S+YN S + N +R G + ++YN +
Sbjct: 834 SNYNNSNNNNNSYYNNNNSNNNNN--SNYNNSSNNNNNNNNNYRNGNNN---NNYNNN 886
Score = 42 (19.8 bits), Expect = 2.7e-61, Sum P(3) = 2.7e-61
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 509 SHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKS 566
S+YN S + N + S+YN S + N +R G + ++YN +
Sbjct: 834 SNYNNSNNNNNSYYNNNNSNNNNN--SNYNNSSNNNNNNNNNYRNGNNN---NNYNNN 886
Score = 40 (19.1 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 12/46 (26%), Positives = 18/46 (39%)
Query: 613 SHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIG 658
S+YN S + N + S+YN S + N +R G
Sbjct: 834 SNYNNSNNNNNSYYNNNNSNNNNN--SNYNNSSNNNNNNNNNYRNG 877
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 141/359 (39%), Positives = 211/359 (58%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHH-DVTVKGRYYLLRLESRPGKCVPRPIQHFEEC- 133
I KN Y + T + S+ E +S+ + ++T L E RP +P P F++
Sbjct: 194 IKKNFYKESTATSAMSKVEADSWRKENFNITWDD---LKDGEKRP---IPNPTCTFDDAF 247
Query: 134 NFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQ 193
P +M+ I + GFQ PT IQ+Q WPI L G DL+ +A+TG+GKTL Y+ P +H+ Q
Sbjct: 248 QCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQ 307
Query: 194 RPLRSGEG-PIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
L+ P +LVL PTRELA Q+E + S R CV+GG + Q++ L+ G
Sbjct: 308 PSLKGQRNRPGMLVLTPTRELALQVEGECCKY-SYKGLRSVCVYGGGNRDEQIEELKKGV 366
Query: 253 EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMW 312
+I+IATPGRL D +NL +YLVLDEAD+MLDMGFEPQI KI+ +RPDRQ +M
Sbjct: 367 DIIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMT 426
Query: 313 SATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGS 372
SATWP V +LA+ +L + + + +G+L+ A ++ Q + V E EK +Q L + S
Sbjct: 427 SATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSS 486
Query: 373 ERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
T K I+FV K AD ++ + + ++HG++ Q++R++ L F+ G+ IL++
Sbjct: 487 --TDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIA 543
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 583 (210.3 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 141/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 162 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 220
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P LR+ G G PI LVLAPTRELA
Sbjct: 221 MACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAV 280
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 281 QIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 340
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 341 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 400
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 401 IFLAVGRVGSTSE-NITQKVVWVEEIDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 457
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 458 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 583 (210.3 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 141/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 162 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 220
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P LR+ G G PI LVLAPTRELA
Sbjct: 221 MACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAV 280
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 281 QIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 340
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 341 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 400
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 401 IFLAVGRVGSTSE-NITQKVVWVEEIDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 457
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 458 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 635 (228.6 bits), Expect = 1.9e-61, P = 1.9e-61
Identities = 139/362 (38%), Positives = 207/362 (57%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y +Q EV Y L +TVKG+ G C P+PI+ + +
Sbjct: 328 EPFRKNFYVEVPELAKMTQEEVNVYRLEMEGITVKGK----------G-C-PKPIKTWVQ 375
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ+Q P ++G DL+ IAKTGSGKT+ ++ P H+
Sbjct: 376 CGISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPMFRHIMD 435
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 436 QRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 495
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 496 EIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 555
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E K KL LL
Sbjct: 556 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQHVIVIEEENKFLKLLELLGH 614
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
E+ S IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 615 Y-QEKGS-VIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLL 672
Query: 430 VS 431
V+
Sbjct: 673 VA 674
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 582 (209.9 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 141/340 (41%), Positives = 204/340 (60%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + + IM I + PT +Q PI DL
Sbjct: 140 KYDDIPVEATGSNCPPH-IESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 198
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P LR+ G G PI LVLAPTRELA
Sbjct: 199 MACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKENGRYGRRKQYPISLVLAPTRELAV 258
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 259 QIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 318
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 319 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 378
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 379 IFLAVGRVGSTSE-NITQKVVWVEELDKRSFLLDLLNATGKD--SLTLVFVETKKGADAL 435
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 436 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 475
Score = 64 (27.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 450 HGDRSQRDREEALHQFRSGKSPILVA 475
Score = 64 (27.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 450 HGDRSQRDREEALHQFRSGKSPILVA 475
Score = 64 (27.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 450 HGDRSQRDREEALHQFRSGKSPILVA 475
Score = 64 (27.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 450 HGDRSQRDREEALHQFRSGKSPILVA 475
Score = 64 (27.6 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 450 HGDRSQRDREEALHQFRSGKSPILVA 475
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 634 (228.2 bits), Expect = 2.5e-61, P = 2.5e-61
Identities = 137/362 (37%), Positives = 205/362 (56%)
Query: 74 EQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEE 132
E KN Y S EV + L +TVKG+ G C P+PI+ + +
Sbjct: 329 EPFRKNFYVEVPELAKMSLEEVNVFRLEMEGITVKGK----------G-C-PKPIKSWVQ 376
Query: 133 CNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS 192
C I+ + + G++ PT IQ Q P +SG DL+ IAKTGSGKT+ ++ P H+
Sbjct: 377 CGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD 436
Query: 193 QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGA 252
QR L GEGPI +++ PTRELA QI F RV CV+GG Q+ L+ GA
Sbjct: 437 QRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA 496
Query: 253 EIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
EI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+ +I+ +RPDRQ
Sbjct: 497 EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQT 556
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
+M+SAT+P+ ++ LA L +++ +G + + ++ Q V V +E +K KL LL
Sbjct: 557 VMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGH 615
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + IIFV+ + AD + + + + +++HG Q +RD ++N+F+ G +L
Sbjct: 616 Y--QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLL 673
Query: 430 VS 431
V+
Sbjct: 674 VA 675
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 601 (216.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 140/319 (43%), Positives = 191/319 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
GK P P Q F + FP + + I++ GF APT IQ Q WPI L G DLV +A TGSGKT
Sbjct: 104 GKSQPNPFQKFTDYEFPR-MFQHIFQ-GFTAPTVIQGQSWPIILGGNDLVGLAATGSGKT 161
Query: 180 LGYIAPAIVHVNS--QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFG 237
L ++ PA++ + S +RP G P+VLV+APTRELAQQIE V T+ R C +G
Sbjct: 162 LAFLLPALLKIISLPKRP-SYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYG 220
Query: 238 GAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIR 297
G K Q + L+ G +IVI TPGRL D L + +L YLVLDEADRMLDMGF PQI
Sbjct: 221 GLGKIDQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDEADRMLDMGFMPQIE 278
Query: 298 KIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ-IVDV--C 354
+I QI +RQ LM+SATWPKEV+ LA FL D +++ +GS T + N+ Q IV++
Sbjct: 279 SLIDQIPKERQTLMFSATWPKEVKLLASKFLKDPIKITVGSQELTGSINVTQHIVNIDDL 338
Query: 355 QEHEKDYKLQGLLSQI-GSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQ 412
+ + D + +++I ++ T+ I+F K K DD + K ++ +H K Q+
Sbjct: 339 SDLQSDDLIYDEINKILTADPTNTVIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQR 398
Query: 413 ERDRVLNEFRIGRASILVS 431
R+ L FR R IL++
Sbjct: 399 MRESGLKLFRDHRIRILIA 417
Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 481 LVSHYNKSQQERDRVLNEFRIGRASILVS 509
+V H K Q+ R+ L FR R IL++
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIA 417
Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 507 LVSHYNKSQQERDRVLNEFRIGRASILVS 535
+V H K Q+ R+ L FR R IL++
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIA 417
Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 533 LVSHYNKSQQERDRVLNEFRIGRASILVS 561
+V H K Q+ R+ L FR R IL++
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIA 417
Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 559 LVSHYNKSQQERDRVLNEFRIGRASILVS 587
+V H K Q+ R+ L FR R IL++
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIA 417
Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 585 LVSHYNKSQQERDRVLNEFRIGRASILVS 613
+V H K Q+ R+ L FR R IL++
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIA 417
Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 611 LVSHYNKSQQERDRVLNEFRIGRASILVS 639
+V H K Q+ R+ L FR R IL++
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIA 417
Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 637 LVSHYNKSQQERDRVLNEFRIGRASILVS 665
+V H K Q+ R+ L FR R IL++
Sbjct: 389 IVLHSGKDQRMRESGLKLFRDHRIRILIA 417
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 581 (209.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 138/341 (40%), Positives = 203/341 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + + IM I + PT +Q PI DL
Sbjct: 138 KYDDIPVEATGSNCPPH-IESFSDVDMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 196
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP------LRSGEG--------PIVLVLAPTRELA 214
+A A+TGSGKT ++ P + + + P +++ G PI LVLAPTRELA
Sbjct: 197 MACAQTGSGKTAAFLLPILSQIYADGPGDALRAMKATNGRYGRRKQYPISLVLAPTRELA 256
Query: 215 QQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLH 274
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 257 VQIYEEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLD 316
Query: 275 RTSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVD 330
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +
Sbjct: 317 FCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDE 376
Query: 331 YVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADD 390
Y+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD
Sbjct: 377 YIFLAVGRVGSTSE-NITQKVVWVEELDKRSFLLDLLNATGKD--SLTLVFVETKKGADA 433
Query: 391 ITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ + ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 434 LEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 474
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 449 HGDRSQRDREEALHQFRSGKSPILVA 474
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 449 HGDRSQRDREEALHQFRSGKSPILVA 474
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 449 HGDRSQRDREEALHQFRSGKSPILVA 474
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 449 HGDRSQRDREEALHQFRSGKSPILVA 474
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 449 HGDRSQRDREEALHQFRSGKSPILVA 474
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 581 (209.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 139/340 (40%), Positives = 205/340 (60%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I++F + + IM I + PT +Q PI DL
Sbjct: 157 KYDDIPVEATGSNCPPH-IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDL 215
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P L++ G G PI LVLAPTRELA
Sbjct: 216 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAV 275
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 276 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 335
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 336 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 395
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V ++ +K L +L GS+ S T++FVETK+ AD +
Sbjct: 396 IFLAVGRVGSTSE-NITQKVVWVEDLDKRSFLLDILGATGSD--SLTLVFVETKKGADSL 452
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 453 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 492
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 467 HGDRSQRDREEALHQFRSGKSPILVA 492
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 467 HGDRSQRDREEALHQFRSGKSPILVA 492
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 467 HGDRSQRDREEALHQFRSGKSPILVA 492
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 467 HGDRSQRDREEALHQFRSGKSPILVA 492
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 467 HGDRSQRDREEALHQFRSGKSPILVA 492
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 581 (209.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 139/340 (40%), Positives = 205/340 (60%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I++F + + IM I + PT +Q PI DL
Sbjct: 160 KYDDIPVEATGSNCPPH-IENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDL 218
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P L++ G G PI LVLAPTRELA
Sbjct: 219 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAV 278
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 279 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 338
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 339 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 398
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V ++ +K L +L GS+ S T++FVETK+ AD +
Sbjct: 399 IFLAVGRVGSTSE-NITQKVVWVEDLDKRSFLLDILGATGSD--SLTLVFVETKKGADSL 455
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 456 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 142/353 (40%), Positives = 201/353 (56%)
Query: 85 HLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCV-----PRPIQHFEECNFPPYI 139
H + E Y H D+ + L G V P+P+ F F +
Sbjct: 221 HSEIEYEPFEKNFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQL 280
Query: 140 MKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSG 199
+K + + + PT IQAQ P ALSG D++ IAKTGSGKT +I P ++HV Q+ L+ G
Sbjct: 281 IKAVRKAEYTQPTPIQAQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPG 340
Query: 200 EGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATP 259
+GPI L+LAPTREL+ QI A FG V C +GG K Q KAL+ GAEI++ATP
Sbjct: 341 DGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSKWEQSKALEQGAEIIVATP 400
Query: 260 GRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKE 319
GR+ID ++ NL R ++LVLDEADRM MGFEPQ+R I +RPDRQ LM+SAT+ K
Sbjct: 401 GRMIDMVKMKATNLRRVTFLVLDEADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKR 460
Query: 320 VQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK-LQGLLSQIGSERTSKT 378
+++LA D L D V++ G LN AN +I Q V V + + L L + SE
Sbjct: 461 IERLARDVLSDPVRIVQGDLNE-ANQDITQSVYVFPNPLQKWNWLLCHLVKFLSE--GSV 517
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+IFV K A+ ++ ++ K + + +HG+ Q +R++V+ +F+ ILV+
Sbjct: 518 LIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVA 570
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 588 (212.0 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 150/381 (39%), Positives = 213/381 (55%)
Query: 67 NWNSMSMEQIN-KNLYTPNHLTVSRSQGEVESYLNHHDVTVK-GRYYLLRLESRPGKCVP 124
N+ S +N K++ P + + V ++H +K Y + +++ GK VP
Sbjct: 92 NYKSSGNRWVNGKHIPGPKNAKLEAELFGVHDDPDYHSSGIKFDNYDNIPVDAS-GKDVP 150
Query: 125 RPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIA 184
PI F +M+ I F PT +Q PI G DL+A A+TGSGKT G++
Sbjct: 151 EPILDFSSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLF 210
Query: 185 PAIVHVNSQRP---------LRSGEG-PIVLVLAPTRELAQQIETVANDFGSATATRVAC 234
P + P S +G P LVLAPTRELA QI A F + R
Sbjct: 211 PLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCV 270
Query: 235 VFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEP 294
V+GGAP G Q++ + G ++++ATPGRL D LE+G ++L YLVLDEADRMLDMGFEP
Sbjct: 271 VYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEP 330
Query: 295 QIRKIIGQI-RP---DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQI 350
QIR I+ + P +RQ LM+SAT+P ++Q LA DFL +Y+ L++G + T+ NI Q
Sbjct: 331 QIRHIVEECDMPSVENRQTLMFSATFPVDIQHLARDFLDNYIFLSVGRVGSTSE-NITQR 389
Query: 351 VDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKS 410
+ + +K L LLS +E T+IFVETKR AD +T + + + A AIHG+++
Sbjct: 390 ILYVDDMDKKSALLDLLS---AEHKGLTLIFVETKRMADQLTDFLIMQNFKATAIHGDRT 446
Query: 411 QQERDRVLNEFRIGRASILVS 431
Q ER+R L+ F+ A ILV+
Sbjct: 447 QAERERALSAFKANVADILVA 467
Score = 55 (24.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +++Q ER+R L+ F+ A ILV+
Sbjct: 442 HGDRTQAERERALSAFKANVADILVA 467
Score = 55 (24.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +++Q ER+R L+ F+ A ILV+
Sbjct: 442 HGDRTQAERERALSAFKANVADILVA 467
Score = 55 (24.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +++Q ER+R L+ F+ A ILV+
Sbjct: 442 HGDRTQAERERALSAFKANVADILVA 467
Score = 55 (24.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +++Q ER+R L+ F+ A ILV+
Sbjct: 442 HGDRTQAERERALSAFKANVADILVA 467
Score = 55 (24.4 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +++Q ER+R L+ F+ A ILV+
Sbjct: 442 HGDRTQAERERALSAFKANVADILVA 467
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 579 (208.9 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 140/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 161 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 219
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P LR+ G+ G PI LVLAPTRELA
Sbjct: 220 MACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAV 279
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 280 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 339
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 340 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 399
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S ++FVETK+ AD +
Sbjct: 400 IFLAVGRVGSTSE-NITQKVVWVEEADKRSFLLDLLNATGKD--SLILVFVETKKGADSL 456
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 457 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 471 HGDRSQRDREEALHQFRSGKSPILVA 496
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 579 (208.9 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 140/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 160 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 218
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P LR+ G+ G PI LVLAPTRELA
Sbjct: 219 MACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKYGRRKQYPISLVLAPTRELAV 278
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 279 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 338
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 339 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 398
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S ++FVETK+ AD +
Sbjct: 399 IFLAVGRVGSTSE-NITQKVVWVEEADKRSFLLDLLNATGKD--SLILVFVETKKGADSL 455
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 456 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
Score = 64 (27.6 bits), Expect = 4.2e-61, Sum P(2) = 4.2e-61
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 470 HGDRSQRDREEALHQFRSGKSPILVA 495
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 584 (210.6 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 135/326 (41%), Positives = 193/326 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP PI F +++ I F PT +Q PI +G DL+A A+TGSGKT
Sbjct: 178 GDKVPEPITSFTAPPLDELLVENIQLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKT 237
Query: 180 LGYIAPAIV--HVNSQRPLRSGEG--------PIVLVLAPTRELAQQIETVANDFGSATA 229
G++ P + ++ P+ G P +LV+APTREL QI + F +
Sbjct: 238 GGFLFPVLSESYMKGPAPVPESNGAFSSHKVYPTILVMAPTRELVSQIYEESKKFSYRSW 297
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD 289
R V+GGA G Q++ + G ++++ATPGRL D L++G ++L YLVLDEADRMLD
Sbjct: 298 VRACVVYGGADIGQQMRNMDRGCDLLVATPGRLKDLLDRGKVSLANIRYLVLDEADRMLD 357
Query: 290 MGFEPQIRKIIGQI-RP---DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANH 345
MGFEPQIR I+ + P DRQ LM+SAT+P+++Q LA DFL DYV L++G + T+
Sbjct: 358 MGFEPQIRYIVEECDMPAVKDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTSE- 416
Query: 346 NIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAI 405
NI Q + ++ EK + LLS + TI+F ETKR AD++ + ++G+ A AI
Sbjct: 417 NITQKILYVEDDEKKSVILDLLS---ANENGLTIVFTETKRMADNLADYLYDQGFPATAI 473
Query: 406 HGNKSQQERDRVLNEFRIGRASILVS 431
HG++SQ ER++ L F+ G A ILV+
Sbjct: 474 HGDRSQYEREKALAAFKNGAAPILVA 499
Score = 57 (25.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ ER++ L F+ G A ILV+
Sbjct: 474 HGDRSQYEREKALAAFKNGAAPILVA 499
Score = 57 (25.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ ER++ L F+ G A ILV+
Sbjct: 474 HGDRSQYEREKALAAFKNGAAPILVA 499
Score = 57 (25.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ ER++ L F+ G A ILV+
Sbjct: 474 HGDRSQYEREKALAAFKNGAAPILVA 499
Score = 57 (25.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ ER++ L F+ G A ILV+
Sbjct: 474 HGDRSQYEREKALAAFKNGAAPILVA 499
Score = 57 (25.1 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ ER++ L F+ G A ILV+
Sbjct: 474 HGDRSQYEREKALAAFKNGAAPILVA 499
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 623 (224.4 bits), Expect = 7.1e-61, P = 7.1e-61
Identities = 142/328 (43%), Positives = 204/328 (62%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP P+ F +++ I +Q PT +Q PI ++G DL+A A+TGSGKT
Sbjct: 178 GHDVPEPVNTFTNPPLDDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKT 237
Query: 180 LGYIAPAI--VHVNSQR---PLRSGE-G------PIVLVLAPTRELAQQIETVANDFGSA 227
G++ P + + N P +G+ G P L+LAPTREL QI A F
Sbjct: 238 GGFLFPILSQAYQNGPAAPPPSAAGQFGRQRKAYPTSLILAPTRELVSQIFDEARKFAYR 297
Query: 228 TATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRM 287
+ R V+GGA G Q++ ++ G ++++ATPGRL+D +E+G I+L YL+LDEADRM
Sbjct: 298 SWVRPCVVYGGADIGSQLRQIERGCDLLVATPGRLVDLIERGRISLVNIKYLILDEADRM 357
Query: 288 LDMGFEPQIRKII-GQIRP---DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTA 343
LDMGFEPQIR+I+ G+ P DRQ LM+SAT+P+++Q LA DFL DYV L++G + T+
Sbjct: 358 LDMGFEPQIRRIVEGEDMPNVNDRQTLMFSATFPRDIQMLARDFLKDYVFLSVGRVGSTS 417
Query: 344 NHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAV 403
NI Q V+ ++H+K L +L G+ T T+IFVETKR AD ++ + N+ + A
Sbjct: 418 E-NITQKVEYVEDHDKRSVLLDILHTHGT--TGLTLIFVETKRMADALSEFLINQRFPAT 474
Query: 404 AIHGNKSQQERDRVLNEFRIGRASILVS 431
AIHG+++Q+ER+R L FR GR ILV+
Sbjct: 475 AIHGDRTQRERERALEMFRSGRYPILVA 502
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 629 (226.5 bits), Expect = 8.9e-61, P = 8.9e-61
Identities = 129/326 (39%), Positives = 198/326 (60%)
Query: 111 YLLRLE--SRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
Y L LE S GK P+PI+ + +C ++ + + ++ PT IQAQ P +SG DL
Sbjct: 338 YRLELEGISVKGKGCPKPIKTWVQCGISMKVLNALKKHNYEKPTPIQAQAIPAIMSGRDL 397
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT 228
+ IAKTGSGKT+ ++ P H+ QRP+ EGP+ +++ PTRELA QI F +
Sbjct: 398 IGIAKTGSGKTIAFLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSL 457
Query: 229 ATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEAD 285
A RV CV+GG Q+ L+ GAEI++ TPGR+ID L G + NL R +Y+V+DEAD
Sbjct: 458 ALRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVIDEAD 517
Query: 286 RMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANH 345
RM DMGFEPQ+ +I+ +RPDRQ +M+SAT+P+ ++ LA L V++ +G + +
Sbjct: 518 RMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPVEVQVGGRSVVCS- 576
Query: 346 NIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAI 405
++ Q V V +E +K KL +L E+ S IIFV+ + AD + + + + +++
Sbjct: 577 DVEQHVIVIEEEKKFLKLLEILGHY-QEKGS-VIIFVDKQEHADGLLKDLMKASYPCMSL 634
Query: 406 HGNKSQQERDRVLNEFRIGRASILVS 431
HG Q +RD ++N+F+ G +LV+
Sbjct: 635 HGGIDQYDRDSIINDFKNGACRLLVA 660
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 574 (207.1 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 141/340 (41%), Positives = 202/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E C P I+ F + IM I + PT +Q PI DL
Sbjct: 162 KYDDIPVEVTGNNCPPH-IESFSDVAMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 220
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LR----SGE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P L+ SG G PI LVLAPTRELA
Sbjct: 221 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKESGRYGRRKQYPISLVLAPTRELAV 280
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 281 QIYEEARKFSYRSRVLPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 340
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+II Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 341 CKYLVLDEADRMLDMGFEPQIRRIIEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 400
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G++ S T++FVETK+ AD +
Sbjct: 401 IFLAVGRVGSTSE-NITQKVVWVEEADKRSFLLDLLNATGTD--SLTLVFVETKKGADSL 457
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 458 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
Score = 64 (27.6 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 11/26 (42%), Positives = 21/26 (80%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR G++ ILV+
Sbjct: 472 HGDRSQRDREEALHQFRSGKSPILVA 497
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 520 (188.1 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 115/239 (48%), Positives = 160/239 (66%)
Query: 197 RSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVI 256
R + PI LVLAPTRELA QI A F + R V+GGA G Q++ L+ G +++
Sbjct: 294 RRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVYGGADIGQQIRDLERGCHLLV 353
Query: 257 ATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMW 312
ATPGRL+D +E+G I L +YLVLDEADRMLDMGFEPQIR+I+ Q + P RQ +M+
Sbjct: 354 ATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGLRQTMMF 413
Query: 313 SATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGS 372
SAT+PKE+Q LA DFL DY+ L +G + T+ NI Q V +E++K L LL+ G
Sbjct: 414 SATFPKEIQILARDFLEDYIFLAVGRVGSTSE-NITQKVVWVEENDKRSFLLDLLNATGK 472
Query: 373 ERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ S T++FVETK+ AD + + +G+A +IHG++SQ++R+ L++FR GR ILV+
Sbjct: 473 D--SLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVA 529
Score = 115 (45.5 bits), Expect = 2.9e-60, Sum P(2) = 2.9e-60
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 124 PRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYI 183
P+PI F + IM I + PT +Q PI S DL+A A+TGSGKT ++
Sbjct: 204 PQPIDRFHDLEMGEIIMGNINLSRYTRPTPVQKHAIPIIKSKRDLMACAQTGSGKTAAFL 263
Query: 184 APAIVHVNSQRP 195
P + + + P
Sbjct: 264 LPVLSQIYTDGP 275
Score = 78 (32.5 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 27/93 (29%), Positives = 48/93 (51%)
Query: 448 RIGRASILVSQ---YKESQQKRDRVLNEFRIGRASILVSHYNKSQQERDRVLNEF--RIG 502
R+G S ++Q + E KR +L+ L + ++++ D L +F R G
Sbjct: 439 RVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGAD-ALEDFLYREG 497
Query: 503 RASILVSHYNKSQQERDRVLNEFRIGRASILVS 535
A + H ++SQ++R+ L++FR GR ILV+
Sbjct: 498 YACTSI-HGDRSQRDREEALHQFRSGRCPILVA 529
Score = 74 (31.1 bits), Expect = 8.3e-06, Sum P(2) = 8.3e-06
Identities = 40/192 (20%), Positives = 82/192 (42%)
Query: 272 NLHRTSYLVLDEADRMLDMGFEPQIR-KIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVD 330
+L R +L++ R+LDM +I + D M + +++++ E +
Sbjct: 344 DLERGCHLLVATPGRLLDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMP 403
Query: 331 YVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGS--ERTSKTIIFVETKRKA 388
L + +QI+ ++ +DY + ++GS E ++ +++VE K
Sbjct: 404 PKGLRQTMMFSATFPKEIQIL--ARDFLEDYIFLAV-GRVGSTSENITQKVVWVEENDKR 460
Query: 389 D---DITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVSQYNKSQQERDRVLN 445
D+ + V + K + L +R G A + ++SQ++R+ L+
Sbjct: 461 SFLLDLLNATGKDSLTLVFVETKKGADALEDFL--YREGYACTSIHG-DRSQRDREEALH 517
Query: 446 EFRIGRASILVS 457
+FR GR ILV+
Sbjct: 518 QFRSGRCPILVA 529
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 525 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 561
+R G A + H ++SQ++R+ L++FR GR ILV+
Sbjct: 494 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPILVA 529
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 551 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 587
+R G A + H ++SQ++R+ L++FR GR ILV+
Sbjct: 494 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPILVA 529
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 577 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 613
+R G A + H ++SQ++R+ L++FR GR ILV+
Sbjct: 494 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPILVA 529
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 603 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 639
+R G A + H ++SQ++R+ L++FR GR ILV+
Sbjct: 494 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPILVA 529
Score = 69 (29.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 629 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 665
+R G A + H ++SQ++R+ L++FR GR ILV+
Sbjct: 494 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPILVA 529
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 626 (225.4 bits), Expect = 3.2e-60, P = 3.2e-60
Identities = 129/325 (39%), Positives = 202/325 (62%)
Query: 111 YLLRLESRP-GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLV 169
Y LE + GK VPRPI+ + + I+ + ++ ++ P IQ Q PI +SG D +
Sbjct: 511 YRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCI 570
Query: 170 AIAKTGSGKTLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATA 229
+AKTGSGKTLG++ P + H+ Q P+ +G+GPI LV+APTREL QQI + F
Sbjct: 571 GVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSKPLG 630
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADR 286
R V+GG+ Q+ L+ G EIV+ TPGR+ID L G I NL R ++LV+DEADR
Sbjct: 631 IRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADR 690
Query: 287 MLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHN 346
M DMGFEPQI +II IRP+RQ +++SAT+P++V+ LA L V++ +G + N +
Sbjct: 691 MFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRS-VVNKD 749
Query: 347 IVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIH 406
I Q+V+V E ++ +L LL + SE+ K ++FV+++ K D + R + + +++H
Sbjct: 750 ITQLVEVRPESDRFLRLLELLGE-WSEK-GKILVFVQSQEKCDALYRDMIKSSYPCLSLH 807
Query: 407 GNKSQQERDRVLNEFRIGRASILVS 431
G K Q +R+ +++F+ ++L++
Sbjct: 808 GGKDQTDRESTISDFKNDVCNLLIA 832
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 574 (207.1 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 140/353 (39%), Positives = 203/353 (57%)
Query: 94 EVESYLNHHDVTVKG--RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAP 151
E E D TV Y + +E+ G VP P+ F E + + I + P
Sbjct: 124 EPEPAFTEQDNTVINFDAYEDIPIETS-GDNVPPPVNTFAEIDLGEALNLNIRRCKYVKP 182
Query: 152 TAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHV----NSQRPLRSGEG-PIVLV 206
T +Q PI L G DL+A A+TGSGKT + P I + + QRP S P+ ++
Sbjct: 183 TPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRTVYPLAVI 242
Query: 207 LAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYL 266
L+PTRELA QI A F T +V +GG P Q++ L+ G +I++ATPGRL D L
Sbjct: 243 LSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQLRELERGVDILVATPGRLNDLL 302
Query: 267 EQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI----RPDRQVLMWSATWPKEVQK 322
E+ +++ +L LDEADRMLDMGFEPQIRKI+ Q+ R RQ L++SAT+P+E+Q+
Sbjct: 303 ERARVSMQMIRFLALDEADRMLDMGFEPQIRKIVEQMDMPPRGVRQTLLFSATFPREIQR 362
Query: 323 LAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS---QIGSE-RTSKT 378
LA DFL +Y+ L +G + + + IVQ V+ + +K L LL + G + + + T
Sbjct: 363 LAADFLANYIFLAVGRVGSSTDL-IVQRVEFVLDSDKRSHLMDLLHAQRENGIQGKQALT 421
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++FVETKR AD + + G+ A +IHG+++QQER+ L F+ GR ILV+
Sbjct: 422 LVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVA 474
Score = 60 (26.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +++QQER+ L F+ GR ILV+
Sbjct: 449 HGDRTQQEREVALKAFKSGRTPILVA 474
Score = 60 (26.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +++QQER+ L F+ GR ILV+
Sbjct: 449 HGDRTQQEREVALKAFKSGRTPILVA 474
Score = 60 (26.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +++QQER+ L F+ GR ILV+
Sbjct: 449 HGDRTQQEREVALKAFKSGRTPILVA 474
Score = 60 (26.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +++QQER+ L F+ GR ILV+
Sbjct: 449 HGDRTQQEREVALKAFKSGRTPILVA 474
Score = 60 (26.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +++QQER+ L F+ GR ILV+
Sbjct: 449 HGDRTQQEREVALKAFKSGRTPILVA 474
Score = 60 (26.2 bits), Expect = 3.8e-60, Sum P(2) = 3.8e-60
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +++QQER+ L F+ GR ILV+
Sbjct: 449 HGDRTQQEREVALKAFKSGRTPILVA 474
Score = 55 (24.4 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+++QQER+ L F+ GR ILV+
Sbjct: 451 DRTQQEREVALKAFKSGRTPILVA 474
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 568 (205.0 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 139/340 (40%), Positives = 200/340 (58%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I++F + IM I + PT +Q PI DL
Sbjct: 161 KYDDIPVEATGNNCPPH-IENFSDIEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 219
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + + P L++ G G PI LVLAPTRELA
Sbjct: 220 MACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAV 279
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 280 QIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 339
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 340 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 399
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G + S T++FVETK+ AD +
Sbjct: 400 IFLAVGRVGSTSE-NITQKVVWVEELDKRSFLLDLLNATGKD--SLTLVFVETKKGADSL 456
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ + +A +IHG++SQ++R+ L++FR GR ILV+
Sbjct: 457 ENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVA 496
Score = 65 (27.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++SQ++R+ L++FR GR ILV+
Sbjct: 471 HGDRSQKDREEALHQFRSGRKPILVA 496
Score = 65 (27.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++SQ++R+ L++FR GR ILV+
Sbjct: 471 HGDRSQKDREEALHQFRSGRKPILVA 496
Score = 65 (27.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++SQ++R+ L++FR GR ILV+
Sbjct: 471 HGDRSQKDREEALHQFRSGRKPILVA 496
Score = 65 (27.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++SQ++R+ L++FR GR ILV+
Sbjct: 471 HGDRSQKDREEALHQFRSGRKPILVA 496
Score = 65 (27.9 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 12/26 (46%), Positives = 20/26 (76%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++SQ++R+ L++FR GR ILV+
Sbjct: 471 HGDRSQKDREEALHQFRSGRKPILVA 496
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 115/164 (70%), Positives = 137/164 (83%)
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+GPI LVLAPTRELAQQ++ VA ++ A + C++GGAPKGPQ++ L+ G EI IAT
Sbjct: 3 GDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIAT 62
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ LMWSATWPK
Sbjct: 63 PGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 122
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
EV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD K
Sbjct: 123 EVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 166
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 576 (207.8 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 136/346 (39%), Positives = 199/346 (57%)
Query: 92 QGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEM--GFQ 149
Q E++ +L+ H + + ++ K RPI F +F P K +Y GF
Sbjct: 46 QTEIDKFLSDHSIKIT--------DASADKPSLRPIISF---SFLPPSNKDLYAPLDGFA 94
Query: 150 APTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSGEGPIVLVLAP 209
+PTAIQ+ WP+ +G D++ IA+TGSGKTL + P + V + + P+ +V++P
Sbjct: 95 SPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLKTKQKSCRPLAVVISP 154
Query: 210 TRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQG 269
TRELA QI F +VAC+FGG K Q +AL++ A +V+ATPGRL D G
Sbjct: 155 TRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQREALKSAA-VVVATPGRLKDLQNDG 213
Query: 270 TINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD-RQVLMWSATWPKEVQKLAEDFL 328
+++L R YLVLDEADRMLD GFE I+ II + RQ +M++ATWP V+ LA F+
Sbjct: 214 SLDLGRVKYLVLDEADRMLDKGFEQDIKDIISPMPVSKRQTVMFTATWPPIVRNLASTFM 273
Query: 329 VDYVQLNIG---SLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
V + IG S +P AN I Q+V+V + HEK+ +L +L++ K + F K
Sbjct: 274 TSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDKVLAFCLYK 333
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++A + R +R KG+ IHG+ SQQER R L F+ G A++LV+
Sbjct: 334 KEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVA 379
Score = 55 (24.4 bits), Expect = 7.8e-60, Sum P(2) = 7.8e-60
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 436 SQQERDRVLNEFRIGRASILVS 457
SQQER R L F+ G A++LV+
Sbjct: 358 SQQERFRSLEAFKSGAATVLVA 379
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 562 (202.9 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 133/323 (41%), Positives = 190/323 (58%)
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
P+ F ++++ I G+ PT +Q PI SG DL+A A+TGSGKT G++ P
Sbjct: 167 PVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFP 226
Query: 186 AIVHVNSQRPLR------SGEG-------PIVLVLAPTRELAQQIETVANDFGSATATRV 232
+ + P +G G P L+LAPTREL QI + F + R
Sbjct: 227 ILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRP 286
Query: 233 ACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGF 292
V+GGA Q++ + G +++ ATPGRL+D +++G I+L +LVLDEADRMLDMGF
Sbjct: 287 CAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGF 346
Query: 293 EPQIRKII-GQIRP---DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIV 348
EPQIR I+ G +RQ LM+SAT+P+++Q LA DFL DYV L++G + T+ NI
Sbjct: 347 EPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSE-NIT 405
Query: 349 QIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGN 408
Q V ++ EK L +L + E T+IFVETKR AD +T + N + A +IHG+
Sbjct: 406 QKVVHVEDSEKRSYLLDILHTLPPE--GLTLIFVETKRMADTLTDYLLNSNFPATSIHGD 463
Query: 409 KSQQERDRVLNEFRIGRASILVS 431
++Q+ER+R L FR GR SI+V+
Sbjct: 464 RTQRERERALELFRSGRTSIMVA 486
Score = 68 (29.0 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +++Q+ER+R L FR GR SI+V+
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVA 486
Score = 68 (29.0 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +++Q+ER+R L FR GR SI+V+
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVA 486
Score = 68 (29.0 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +++Q+ER+R L FR GR SI+V+
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVA 486
Score = 68 (29.0 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +++Q+ER+R L FR GR SI+V+
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVA 486
Score = 68 (29.0 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +++Q+ER+R L FR GR SI+V+
Sbjct: 461 HGDRTQRERERALELFRSGRTSIMVA 486
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 143/357 (40%), Positives = 210/357 (58%)
Query: 84 NHLTVSRSQGEVESYLNHHDVTVKGRYYL--LRLES----RPGKCVP-RPIQHFEECNFP 136
+H + + Y H D+ K +Y+ +RL++ R G P RP+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDI--KRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFD 273
Query: 137 PYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPL 196
+M+ I + ++ PT IQA P ALSG D++ IAKTGSGKT Y+ PAIVH+ Q L
Sbjct: 274 KLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDL 333
Query: 197 RSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQT-GAEIV 255
++GEGP+ +++ PTRELA Q+ A F C +GG K Q LQ GAE+V
Sbjct: 334 KAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMV 393
Query: 256 IATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSAT 315
+ TPGR+ID ++ G N RT++LV DEADRM DMGFE Q++ I +RPDRQ LM+SAT
Sbjct: 394 VCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCLMFSAT 453
Query: 316 WPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERT 375
+ ++V++LA D LVD V++ G + AN +I Q V V Q +D KL L+ + +
Sbjct: 454 FKQKVERLARDALVDPVRIVQGEVGE-ANADIEQKVFVMQN--QDVKLHWLIRNLVEFAS 510
Query: 376 -SKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
K +IFV K ++D+ + ++ K + V +HG+ Q ER+ L +FR ++ ILV+
Sbjct: 511 LGKVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFR-KKSQILVA 566
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 584 (210.6 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 137/326 (42%), Positives = 192/326 (58%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
GK VP PI F +++ I F PT +Q PI +G DL+A A+TGSGKT
Sbjct: 134 GKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKT 193
Query: 180 LGYIAPAIVHV--NSQRPLRSGEG--------PIVLVLAPTRELAQQIETVANDFGSATA 229
G++ P + P +G P +++APTRELA QI A F +
Sbjct: 194 GGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSW 253
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD 289
+ V+GG+P G Q++ ++ G ++++ATPGRL D LE+G I+L YLVLDEADRMLD
Sbjct: 254 VKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLD 313
Query: 290 MGFEPQIRKIIGQ--IRP--DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANH 345
MGFEPQIR I+ + P +RQ LM+SAT+P ++Q LA DFL DY+ L++G + T+
Sbjct: 314 MGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLARDFLSDYIFLSVGRVGSTSE- 372
Query: 346 NIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAI 405
NI Q V + +K L LLS + T+IFVETKR AD +T + + + A AI
Sbjct: 373 NITQKVLYVENQDKKSALLDLLS---ASTDGLTLIFVETKRMADQLTDFLIMQNFRATAI 429
Query: 406 HGNKSQQERDRVLNEFRIGRASILVS 431
HG+++Q ER+R L FR G A++LV+
Sbjct: 430 HGDRTQSERERALAAFRSGAATLLVA 455
Score = 38 (18.4 bits), Expect = 6.9e-59, Sum P(2) = 6.9e-59
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 70 SMSMEQINKNLYTPNHL 86
++S+ N+N Y P HL
Sbjct: 10 NLSINDNNENGYVPPHL 26
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 550 (198.7 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 125/323 (38%), Positives = 187/323 (57%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP P+ F + + + I + PT +Q PI L+ DL+A A+TGSGKT
Sbjct: 143 GGDVPPPVNTFADIDLGDALNLNIRRCKYVRPTPVQRHAIPILLAERDLMACAQTGSGKT 202
Query: 180 LGYIAPAIVHVNSQRPLRSGEG-----PIVLVLAPTRELAQQIETVANDFGSATATRVAC 234
+ P I + + + G P ++L+PTRELA QI A F T +V
Sbjct: 203 AAFCFPIISGIMKDQHVERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVV 262
Query: 235 VFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEP 294
+GG P Q++ L+ G +I++ATPGRL D LE+ +++ +L LDEADRMLDMGFEP
Sbjct: 263 AYGGTPIHQQLRELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDMGFEP 322
Query: 295 QIRKIIGQI----RPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQI 350
QIRKI+ Q+ R RQ +++SAT+P ++Q+LA DF+ +Y+ L +G + + + I Q
Sbjct: 323 QIRKIVEQMDMPPRGVRQTMLFSATFPSQIQRLAADFMSNYIFLAVGRVGSSTDL-ITQR 381
Query: 351 VDVCQEHEKDYKLQGLL--SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGN 408
V+ QE +K L LL + ++ S T++FVETKR AD + + + A +IHG+
Sbjct: 382 VEFVQESDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGD 441
Query: 409 KSQQERDRVLNEFRIGRASILVS 431
++QQER+ L F+ GR ILV+
Sbjct: 442 RTQQEREVALRSFKTGRTPILVA 464
Score = 62 (26.9 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +++QQER+ L F+ GR ILV+
Sbjct: 439 HGDRTQQEREVALRSFKTGRTPILVA 464
Score = 62 (26.9 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +++QQER+ L F+ GR ILV+
Sbjct: 439 HGDRTQQEREVALRSFKTGRTPILVA 464
Score = 62 (26.9 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +++QQER+ L F+ GR ILV+
Sbjct: 439 HGDRTQQEREVALRSFKTGRTPILVA 464
Score = 62 (26.9 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +++QQER+ L F+ GR ILV+
Sbjct: 439 HGDRTQQEREVALRSFKTGRTPILVA 464
Score = 62 (26.9 bits), Expect = 7.8e-58, Sum P(2) = 7.8e-58
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +++QQER+ L F+ GR ILV+
Sbjct: 439 HGDRTQQEREVALRSFKTGRTPILVA 464
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
Identities = 142/340 (41%), Positives = 203/340 (59%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I+ F + IM I + PT +Q PI DL
Sbjct: 204 KYDDIPVEATGNNCPPH-IESFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 262
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSGKT ++ P + + S P LR+ G G PI LVLAPTRELA
Sbjct: 263 MACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAV 322
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA G Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 323 QIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 382
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 383 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 442
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ S + S T++FVETK+ AD +
Sbjct: 443 IFLAVGRVGSTSE-NITQKVVWVEESDKRSFLLDLLNATESGKDSLTLVFVETKKGADSL 501
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++G+A +IHG++SQ++R+ L++FR G++ ILV+
Sbjct: 502 EDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVA 541
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 135/360 (37%), Positives = 211/360 (58%)
Query: 76 INKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNF 135
+ Y + S Q +++ Y +++ V+ L RP+ F+ +
Sbjct: 72 VASEFYVQSEALTSLPQSDIDEYFKENEIAVEDSLDLAL----------RPLLSFDYLSL 121
Query: 136 PPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRP 195
I +I + F PT IQA WP LSG D+V +A+TGSGKT + PAI H+ + +
Sbjct: 122 DSSIQAEISK--FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAISHLMNDQK 179
Query: 196 LRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIV 255
R G VLV++PTRELA QI + CV+GG PK Q L+ +++V
Sbjct: 180 KR---GIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKK-SQVV 235
Query: 256 IATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD-RQVLMWSA 314
+ATPGRL+D L++G+++L + +YLVLDEADRML+ GFE I+ II + RQ LM++A
Sbjct: 236 VATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTA 295
Query: 315 TWPKEVQKLAEDFLVDYVQLNIGSLNP-TANHNIVQIVDVCQEHEKDYKLQGLLSQI--G 371
TWPKEV++LA F+ + ++++IG+ + TAN I QIV+V K+ KL LL + G
Sbjct: 296 TWPKEVRELASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSG 355
Query: 372 SERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ K +IF K++A + R+++ G+ AIHG+ SQQ+R + LNEF+ G++++L++
Sbjct: 356 PKKNEKVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLA 415
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 594 (214.2 bits), Expect = 1.0e-56, P = 1.0e-56
Identities = 139/378 (36%), Positives = 205/378 (54%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
GK P+PI+ + +C M+ + +GF+ PT IQ Q P +SG DL+ IAKTGSGKT
Sbjct: 502 GKGCPKPIKTWAQCGVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKT 561
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGA 239
L +I P H+ Q + G+G I +++APTREL QI F + R CV+GG
Sbjct: 562 LAFILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGT 621
Query: 240 PKGPQVKALQTGAEIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQI 296
Q+ L+ GAEI++ TPGR+ID L G + NL R +Y+VLDEADRM DMGFEPQ+
Sbjct: 622 GISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQV 681
Query: 297 RKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQE 356
+II +RPDRQ +M+SAT+P++++ LA L +++ +G + + Q V + +
Sbjct: 682 MRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVCKE-VEQHVVILND 740
Query: 357 HEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDR 416
K +KL LL I E S I+FV+ + AD + R + + +++HG Q +RD
Sbjct: 741 DAKFFKLLELLG-IYQEAGS-IIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDS 798
Query: 417 VLNEFRIGRASILVSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIG 476
+ +F+ G+ +L++ S R + + ILV Y D V R G
Sbjct: 799 TIIDFKSGKVRLLIAT---SVAARGLDVKDL------ILVVNYDVPNHYEDYVHRCGRTG 849
Query: 477 RASILVSHYNKSQQERDR 494
RA S Y E+ R
Sbjct: 850 RAGKKGSAYTFITPEQSR 867
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 146/379 (38%), Positives = 219/379 (57%)
Query: 64 RTPNWNSMSMEQINKNLYT-PNHL-TVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGK 121
R + N M+ I ++LY PN +S Q + E Y N + V Y R ES
Sbjct: 24 RLKDENFSWMKPIVRDLYKIPNEQKNLSPEQLQ-ELYTNGGVMKV----YPFREESTVK- 77
Query: 122 CVPRPIQHFEEC-NFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTL 180
+P P+ FE+ IM +I + GF+ P+ IQ+Q WP+ LSG D + +++TGSGKTL
Sbjct: 78 -IPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTL 136
Query: 181 GYIAPAIVHVNSQRPL--RSGE----GPIVLVLAPTRELAQQIETVANDFGSATATRVAC 234
++ PA++H+++Q ++ E P VLVL+PTRELAQQIE + S + C
Sbjct: 137 AFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY-SYNGYKSVC 195
Query: 235 VFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEP 294
++GG + QV+A + G EIVIATPGRL D G I+L +Y+VLDEADRMLDMGFE
Sbjct: 196 LYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEV 255
Query: 295 QIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVC 354
IR+I+ +IRPDR V + SATWP+ V+KL + + + V GSL+ T+ ++ Q +
Sbjct: 256 AIRRILFEIRPDRLVALTSATWPEGVRKLTDKYTKEAVMAVNGSLDLTSCKSVTQFFEFV 315
Query: 355 QEHEKDYKLQGLLSQIGSE--RTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQ 412
+ ++ +++ + + + K IIFV++K AD ++ KG + +HG +SQ
Sbjct: 316 PHDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQS 375
Query: 413 ERDRVLNEFRIGRASILVS 431
+R+ LN R G ILV+
Sbjct: 376 DREMSLNMLRSGEVQILVA 394
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 142/327 (43%), Positives = 189/327 (57%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP I+HF E F P +M+ + G+ PT +Q P L+ DL++ A+TGSGKT
Sbjct: 131 GDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKT 190
Query: 180 LGYIAPAIVHVNSQRP-------LRSGEG---PIVLVLAPTRELAQQIETVANDFGSATA 229
++ P I H+ + P +G P LVL+PTRELA QI A F +
Sbjct: 191 AAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIHKEATKFSYKSN 250
Query: 230 TRVACVFGGAPK-GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRML 288
+ A ++GG QV L+ G I+IATPGRLID +EQG I L YLVLDEADRML
Sbjct: 251 IQTAILYGGRENYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRML 310
Query: 289 DMGFEPQIRKIIGQIRPD---RQVLMWSATWPKEVQKLAEDFLVD-YVQLNIGSLNPTAN 344
DMGFEPQIRKI+GQ P R M+SAT+PKE+Q LA+DFL D Y+ L +G + T+
Sbjct: 311 DMGFEPQIRKIVGQGMPPKTARTTAMFSATFPKEIQVLAKDFLKDNYIFLAVGRVGSTSE 370
Query: 345 HNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVA 404
NI Q + E EK L +L SE ++FVETKR A+++ + + +V+
Sbjct: 371 -NIEQRLLWVNEMEKRSNLMEILMNEHSENL--VLVFVETKRGANELAYFLNRQQIRSVS 427
Query: 405 IHGNKSQQERDRVLNEFRIGRASILVS 431
IHG+ Q ER+R L FR G+ ILV+
Sbjct: 428 IHGDLKQIERERNLELFRSGQCPILVA 454
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 531 (192.0 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 146/369 (39%), Positives = 208/369 (56%)
Query: 70 SMSMEQINKNLYT--PNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLE-SRPGKCVPRP 126
S S IN Y P T + S G +ES+ HDV + G + + SR + P P
Sbjct: 195 SASNTGINFEKYDDIPVEATGTNSPGHIESF---HDVDM-GEIIMGNITLSRYTR--PTP 248
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+Q + P I+K ++ A T G A L I G G+ L A
Sbjct: 249 VQKYA---IP--IIKTKRDLMACAQTG---SGKTAAFLLPVLSQIYSEGPGEAL-QATKA 299
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVK 246
+ + +R + PI LVLAPTRELA QI A F + R V+GGA G Q++
Sbjct: 300 STQQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIR 359
Query: 247 ALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ--IR 304
L+ G +++ATPGRL+D +E+G I L YLVLDEADRMLDMGFEPQIR+I+ Q +
Sbjct: 360 DLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMP 419
Query: 305 P--DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
P RQ +M+SAT+PKE+Q LA DFL +Y+ L +G + T+ NI Q V +E++K
Sbjct: 420 PKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSE-NITQKVVWVEENDKRSF 478
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L LL+ G + S T++FVETK+ AD + + +G+A +IHG++SQ++R+ L++FR
Sbjct: 479 LLDLLNATGKD--SLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFR 536
Query: 423 IGRASILVS 431
GR I+V+
Sbjct: 537 SGRCPIMVA 545
Score = 67 (28.6 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 525 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 561
+R G A + H ++SQ++R+ L++FR GR I+V+
Sbjct: 510 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPIMVA 545
Score = 67 (28.6 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 551 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 587
+R G A + H ++SQ++R+ L++FR GR I+V+
Sbjct: 510 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPIMVA 545
Score = 67 (28.6 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 577 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 613
+R G A + H ++SQ++R+ L++FR GR I+V+
Sbjct: 510 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPIMVA 545
Score = 67 (28.6 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 603 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 639
+R G A + H ++SQ++R+ L++FR GR I+V+
Sbjct: 510 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPIMVA 545
Score = 67 (28.6 bits), Expect = 2.3e-56, Sum P(2) = 2.3e-56
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 629 FRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 665
+R G A + H ++SQ++R+ L++FR GR I+V+
Sbjct: 510 YREGYACTSI-HGDRSQRDREEALHQFRSGRCPIMVA 545
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 549 (198.3 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 136/330 (41%), Positives = 189/330 (57%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ VP I F++ I + + PT +Q PI ++G DL+A A+TGSGKT
Sbjct: 287 GQNVPPNITSFDDVQLTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMACAQTGSGKT 346
Query: 180 LGYIAPAIV------HV---NSQRPL-RSGEGPIVLVLAPTRELAQQIETVANDFGSATA 229
++ P + HV S R R + P+ LVLAPTRELA QI A F +
Sbjct: 347 AAFLVPILNQMYELGHVPPPQSTRQYSRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSR 406
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD 289
R A ++GG Q++ L G +++ATPGRL D + +G + L +LVLDEADRMLD
Sbjct: 407 MRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMITRGKVGLENIRFLVLDEADRMLD 466
Query: 290 MGFEPQIRKIIGQIR-P---DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANH 345
MGFEPQIR+I+ Q+ P RQ LM+SAT+PK++Q+LA DFL +Y+ L +G + T+
Sbjct: 467 MGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASDFLSNYIFLAVGRVGSTSE- 525
Query: 346 NIVQIVDVCQEHEKDYKLQGLLSQI--GSERT--SKTIIFVETKRKADDITRSVRNKGWA 401
NI Q + E +K L LLS I G E T S T+IFVETK+ AD + +
Sbjct: 526 NITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGADSLEEFLYQCNHP 585
Query: 402 AVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+IHG+++Q+ER+ L FR G ILV+
Sbjct: 586 VTSIHGDRTQKEREEALRCFRSGDCPILVA 615
Score = 52 (23.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H +++Q+ER+ L FR G ILV+
Sbjct: 590 HGDRTQKEREEALRCFRSGDCPILVA 615
Score = 52 (23.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +++Q+ER+ L FR G ILV+
Sbjct: 590 HGDRTQKEREEALRCFRSGDCPILVA 615
Score = 52 (23.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +++Q+ER+ L FR G ILV+
Sbjct: 590 HGDRTQKEREEALRCFRSGDCPILVA 615
Score = 52 (23.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +++Q+ER+ L FR G ILV+
Sbjct: 590 HGDRTQKEREEALRCFRSGDCPILVA 615
Score = 52 (23.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +++Q+ER+ L FR G ILV+
Sbjct: 590 HGDRTQKEREEALRCFRSGDCPILVA 615
Score = 52 (23.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +++Q+ER+ L FR G ILV+
Sbjct: 590 HGDRTQKEREEALRCFRSGDCPILVA 615
Score = 52 (23.4 bits), Expect = 2.8e-56, Sum P(2) = 2.8e-56
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +++Q+ER+ L FR G ILV+
Sbjct: 590 HGDRTQKEREEALRCFRSGDCPILVA 615
Score = 47 (21.6 bits), Expect = 9.4e-56, Sum P(2) = 9.4e-56
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
+++Q+ER+ L FR G ILV+
Sbjct: 592 DRTQKEREEALRCFRSGDCPILVA 615
Score = 40 (19.1 bits), Expect = 5.1e-55, Sum P(2) = 5.1e-55
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 462 SQQKRDRVLNEFRIGRASILVS 483
+Q++R+ L FR G ILV+
Sbjct: 594 TQKEREEALRCFRSGDCPILVA 615
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 581 (209.6 bits), Expect = 5.8e-56, P = 5.8e-56
Identities = 126/317 (39%), Positives = 190/317 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYE-MGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGK 178
G VPRPI + P + I++ + F+ P+AIQ+Q P LSG D++ IAKTGSGK
Sbjct: 285 GTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGK 344
Query: 179 TLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFG 237
TL Y+ P + H+ Q+ + +GPI L+L+PTRELA QIE +F RV C +G
Sbjct: 345 TLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYG 404
Query: 238 GAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT---INLHRTSYLVLDEADRMLDMGFEP 294
G+ Q+ L+ G EI++ TPGR+ID L + +NL R +++VLDEADRM D+GFEP
Sbjct: 405 GSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEP 464
Query: 295 QIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLN---PTANHNIVQIV 351
Q+ KI+ QIRPDRQ +++SAT+P++++ LA+ L D V + +G ++ P +V
Sbjct: 465 QVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEIKQEVVLFE 524
Query: 352 DVCQEHEKDYK------LQGLLSQIGSERT-SKTIIFVETKRKADDITRSVRNKGWAAVA 404
+E +K YK L +L+ E SK ++F E + AD++ ++ + + A+A
Sbjct: 525 TSAEEQDK-YKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELVANLLSNKYPAIA 583
Query: 405 IHGNKSQQERDRVLNEF 421
IHG K Q +R + EF
Sbjct: 584 IHGGKDQMDRKYAIKEF 600
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 581 (209.6 bits), Expect = 5.8e-56, P = 5.8e-56
Identities = 126/317 (39%), Positives = 190/317 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYE-MGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGK 178
G VPRPI + P + I++ + F+ P+AIQ+Q P LSG D++ IAKTGSGK
Sbjct: 285 GTDVPRPILKWSHLALPTNLSSVIHDKLKFEKPSAIQSQALPTILSGRDVIGIAKTGSGK 344
Query: 179 TLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFG 237
TL Y+ P + H+ Q+ + +GPI L+L+PTRELA QIE +F RV C +G
Sbjct: 345 TLSYVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYG 404
Query: 238 GAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT---INLHRTSYLVLDEADRMLDMGFEP 294
G+ Q+ L+ G EI++ TPGR+ID L + +NL R +++VLDEADRM D+GFEP
Sbjct: 405 GSSIENQINELKKGVEIIVGTPGRVIDLLAANSGRVLNLKRCTFVVLDEADRMFDLGFEP 464
Query: 295 QIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLN---PTANHNIVQIV 351
Q+ KI+ QIRPDRQ +++SAT+P++++ LA+ L D V + +G ++ P +V
Sbjct: 465 QVNKILTQIRPDRQTVLFSATFPRKMETLAKQILTDPVVIIVGGISVVAPEIKQEVVLFE 524
Query: 352 DVCQEHEKDYK------LQGLLSQIGSERT-SKTIIFVETKRKADDITRSVRNKGWAAVA 404
+E +K YK L +L+ E SK ++F E + AD++ ++ + + A+A
Sbjct: 525 TSAEEQDK-YKQQRVEKLHDILTNYQIEHPDSKILVFTEKQNDADELVANLLSNKYPAIA 583
Query: 405 IHGNKSQQERDRVLNEF 421
IHG K Q +R + EF
Sbjct: 584 IHGGKDQMDRKYAIKEF 600
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 542 (195.9 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 137/340 (40%), Positives = 194/340 (57%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ G VP+PI F + + +I + I G+ PT +Q P G DL
Sbjct: 213 KYEEIPVEAT-GDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDL 271
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP------LRSGEG-----PIVLVLAPTRELAQQI 217
++ A+TGSGKT ++ P + + P + S G P LVL+PTREL+ QI
Sbjct: 272 MSCAQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 331
Query: 218 ETVANDFGSATATRVACVFGGAPK-GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRT 276
+ F T A ++GG Q+ L+ G I+IATPGRLID ++QG I +
Sbjct: 332 FNESRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGC 391
Query: 277 SYLVLDEADRMLDMGFEPQIRKIIGQIR-PDRQ---VLMWSATWPKEVQKLAEDFLVD-Y 331
YLVLDEADRMLDMGFEPQIR+I+ R P ++ M+SAT+PKE+Q LA+DFL + Y
Sbjct: 392 RYLVLDEADRMLDMGFEPQIRQIVECNRMPSKEERITAMFSATFPKEIQLLAQDFLKENY 451
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
V L +G + T+ NI+Q + +E EK L LL G +S T++FVETKR A D+
Sbjct: 452 VFLAVGRVGSTSE-NIMQKIVWVEEDEKRSYLMDLLDATGD--SSLTLVFVETKRGASDL 508
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ + + V IHG+ Q ER++ L+ FR G A ILV+
Sbjct: 509 AYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVA 548
Score = 52 (23.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 532 ILVSHYNKSQQERDRVLNEFRIGRASILVS 561
++ H + Q ER++ L+ FR G A ILV+
Sbjct: 519 VVTIHGDLKQFEREKHLDLFRTGTAPILVA 548
Score = 52 (23.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 558 ILVSHYNKSQQERDRVLNEFRIGRASILVS 587
++ H + Q ER++ L+ FR G A ILV+
Sbjct: 519 VVTIHGDLKQFEREKHLDLFRTGTAPILVA 548
Score = 52 (23.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 584 ILVSHYNKSQQERDRVLNEFRIGRASILVS 613
++ H + Q ER++ L+ FR G A ILV+
Sbjct: 519 VVTIHGDLKQFEREKHLDLFRTGTAPILVA 548
Score = 52 (23.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 610 ILVSHYNKSQQERDRVLNEFRIGRASILVS 639
++ H + Q ER++ L+ FR G A ILV+
Sbjct: 519 VVTIHGDLKQFEREKHLDLFRTGTAPILVA 548
Score = 52 (23.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 636 ILVSHYNKSQQERDRVLNEFRIGRASILVS 665
++ H + Q ER++ L+ FR G A ILV+
Sbjct: 519 VVTIHGDLKQFEREKHLDLFRTGTAPILVA 548
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 487 (176.5 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
Identities = 100/228 (43%), Positives = 148/228 (64%)
Query: 205 LVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLID 264
L+L PTREL Q+ F + V+GG PK Q+ L+ GA+I++ATPGRL+D
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPKYYQINNLKKGADIIVATPGRLLD 490
Query: 265 YLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLA 324
+LE G INL + Y+V+DEADR+LDMGFE Q+RKI+ Q+ ++Q+L +ATWP++V+KLA
Sbjct: 491 FLENGNINLLKCIYVVIDEADRLLDMGFEKQLRKIMTQVNKNKQLLFLTATWPEQVRKLA 550
Query: 325 EDFL-VDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVE 383
DF D V++ IG TAN NI Q V + + KL L + + +K +IF +
Sbjct: 551 YDFCSYDPVKIQIGKNELTANKNIEQNVIISSSIDMKKKLLDWLKE--NYENNKILIFCD 608
Query: 384 TKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
TKR D++ + +R + A++IHG+K Q+ERDR+LN ++ R +ILV+
Sbjct: 609 TKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 143 (55.4 bits), Expect = 2.8e-55, Sum P(2) = 2.8e-55
Identities = 29/64 (45%), Positives = 39/64 (60%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
I F + F I+ + F PTAIQ WPIALSG DL+ +A+TGSGKTL ++ P
Sbjct: 287 INKFSDVCFHESILNYLNNK-FSEPTAIQKITWPIALSGKDLIGVAETGSGKTLAFVLPC 345
Query: 187 IVHV 190
+H+
Sbjct: 346 FMHI 349
Score = 87 (35.7 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 461 ESQQKRDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 509
++++ D + E R + + L H +K Q+ERDR+LN ++ R +ILV+
Sbjct: 608 DTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 85 (35.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 493 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 535
D + E R + + L H +K Q+ERDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 85 (35.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 519 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 561
D + E R + + L H +K Q+ERDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 85 (35.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 545 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 587
D + E R + + L H +K Q+ERDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 85 (35.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 571 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 613
D + E R + + L H +K Q+ERDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 85 (35.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 597 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 639
D + E R + + L H +K Q+ERDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 85 (35.0 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 623 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 665
D + E R + + L H +K Q+ERDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 77 (32.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 415 DRVLNEFRIGRASILVSQYNKSQQERDRVLNEFRIGRASILVS 457
D + E R + + L +K Q+ERDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
Score = 67 (28.6 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 441 DRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVS 483
D + E R + + L + Q++RDR+LN ++ R +ILV+
Sbjct: 614 DNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVA 656
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 533 (192.7 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 124/323 (38%), Positives = 183/323 (56%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ +P PI++F + FP +++ + + G PT IQ QG P+ LSG D++ IA TGSGKT
Sbjct: 89 GEDIPPPIKNFMDMKFPSPLLRMLKDKGIMHPTPIQVQGLPVVLSGRDMIGIAFTGSGKT 148
Query: 180 LGYIAPAIVHVNSQR---PLRSGEGPIVLVLAPTRELAQQIETVANDF-------GSATA 229
L ++ P I+ + P+ +GEGPI LV+ P+RELA+Q V F G
Sbjct: 149 LVFVLPMIILALQEEIMMPIAAGEGPIALVICPSRELAKQTYDVVEQFVASLVEDGYPRL 208
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD 289
+ C+ GG Q+ ++ G IV+ATPGRL D L + ++L L LDEADR++D
Sbjct: 209 RSLLCI-GGVDMRSQLDVVKKGVHIVVATPGRLKDILAKKKMSLDACRLLTLDEADRLVD 267
Query: 290 MGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ 349
+GFE IR + + RQ L++SAT P ++Q A LV V +N+G AN +++Q
Sbjct: 268 LGFEDDIRHVFDHFKSQRQTLLFSATMPAKIQIFATSALVKPVTVNVGRAG-AANLDVIQ 326
Query: 350 IVD-VCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGN 408
V+ V QE + Y L+ L + T +IF E K DDI + KG AVAIHG
Sbjct: 327 EVEYVKQEAKIVYLLECL-----QKTTPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGG 381
Query: 409 KSQQERDRVLNEFRIGRASILVS 431
K Q++RD ++ F+ G+ +LV+
Sbjct: 382 KDQEDRDYAISLFKAGKKDVLVA 404
Score = 54 (24.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K Q++RD ++ F+ G+ +LV+
Sbjct: 379 HGGKDQEDRDYAISLFKAGKKDVLVA 404
Score = 54 (24.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K Q++RD ++ F+ G+ +LV+
Sbjct: 379 HGGKDQEDRDYAISLFKAGKKDVLVA 404
Score = 54 (24.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K Q++RD ++ F+ G+ +LV+
Sbjct: 379 HGGKDQEDRDYAISLFKAGKKDVLVA 404
Score = 54 (24.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K Q++RD ++ F+ G+ +LV+
Sbjct: 379 HGGKDQEDRDYAISLFKAGKKDVLVA 404
Score = 54 (24.1 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K Q++RD ++ F+ G+ +LV+
Sbjct: 379 HGGKDQEDRDYAISLFKAGKKDVLVA 404
Score = 49 (22.3 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q++RD ++ F+ G+ +LV+
Sbjct: 382 KDQEDRDYAISLFKAGKKDVLVA 404
Score = 39 (18.8 bits), Expect = 1.3e-53, Sum P(2) = 1.3e-53
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 461 ESQQKRDRVLNEFRIGRASILVSHYNKSQ----QERDRVLNEFRIGRASILVSHYNKSQQ 516
+ Q+ RD ++ F+ G+ +LV+ S+ + V+N G V H
Sbjct: 382 KDQEDRDYAISLFKAGKKDVLVATDVASKGLDFPDIQHVINYDMPGEIENYV-H------ 434
Query: 517 ERDRVLNEFRIGRASILVSHYNKSQQE 543
R+ R G+ I + NK+Q E
Sbjct: 435 ---RIGRTGRCGKTGIATTFINKNQSE 458
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 576 (207.8 bits), Expect = 4.2e-55, P = 4.2e-55
Identities = 132/315 (41%), Positives = 191/315 (60%)
Query: 111 YLLRLESRP-GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLV 169
Y LE + GK VPRPIQ + + I+ + ++ ++ P IQAQ PI +SG D +
Sbjct: 378 YRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCI 437
Query: 170 AIAKTGSGKTLGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATA 229
+AKTGSGKTLG++ P + H+ Q P+ +G+GPI LV+APTREL QQI + F A
Sbjct: 438 GVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSKALG 497
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADR 286
V+GG+ Q+ L+ G EIV+ TPGR+ID L G I NL R +YLV+DEADR
Sbjct: 498 IICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADR 557
Query: 287 MLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHN 346
M DMGFEPQI +I+ IRPDRQ +++SAT+P++V+ LA L V++ +G + N +
Sbjct: 558 MFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRS-VVNKD 616
Query: 347 IVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKA-DDITRSVRNKGWA-AVA 404
I Q+V++ E E+ +L LL + E+ K ++FV ++ K+ D V N A +VA
Sbjct: 617 ITQLVEIRPESERFSRLLELLGE-WYEK-GKVLVFVRSQEKSISDFKSDVCNLLIATSVA 674
Query: 405 IHGNKSQQERDRVLN 419
G +E + V+N
Sbjct: 675 ARG-LDVKELELVVN 688
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 531 (192.0 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 133/372 (35%), Positives = 203/372 (54%)
Query: 71 MSMEQINKNLYTPNHLTVS-RSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQH 129
MS++++ K + + + S R+ + + V+ +Y++L +E G+ +P PI+
Sbjct: 123 MSVKEMAKGITYDDPIKTSWRAPRYILAMSEARHNRVRKKYHIL-VE---GEGIPPPIKS 178
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F+E FP I++ + + G Q PT IQ QG P LSG D++ IA TGSGKTL + P I+
Sbjct: 179 FKEMKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMF 238
Query: 190 VNSQR---PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAP 240
Q P EGP L++ P+RELA+Q + + S R A GG
Sbjct: 239 CLEQEKRLPFSKREGPYGLIICPSRELARQTHGIIEYYCRLLQEDSLPPLRCALCIGGMS 298
Query: 241 KGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKII 300
Q++ ++ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I
Sbjct: 299 VKEQMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIF 358
Query: 301 GQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD 360
+ RQ L++SAT PK++Q A+ LV + +N+G A+ ++VQ V+ +E K
Sbjct: 359 SYFKGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAG-AASLDVVQEVEYVKEEAKM 417
Query: 361 -YKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLN 419
Y L+ L + +IF E K D I + KG AVAIHG K Q+ER + +
Sbjct: 418 VYLLECL-----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIE 472
Query: 420 EFRIGRASILVS 431
FR G+ +LV+
Sbjct: 473 AFRDGKKDVLVA 484
Score = 51 (23.0 bits), Expect = 1.1e-54, Sum P(2) = 1.1e-54
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 462 KDQEERTKAIEAFRDGKKDVLVA 484
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 559 (201.8 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 129/374 (34%), Positives = 209/374 (55%)
Query: 67 NWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVT-VKGRYY-LLRLESRP----G 120
N+ M+++NK L NH + + Y+ ++T +K + R + G
Sbjct: 656 NYEENGMKKMNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRG 715
Query: 121 KCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTL 180
K PRP+Q+F +C P I++ + + F+ IQ Q P + G D++AIA+TGSGKTL
Sbjct: 716 KNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTL 775
Query: 181 GYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAP 240
Y+ P I HV Q PLR+ +GPI ++L PTREL+ Q++ A + A + V+GG+
Sbjct: 776 SYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSN 835
Query: 241 KGPQVKALQTGAEIVIATPGRLIDYLEQGTI---NLHRTSYLVLDEADRMLDMGFEPQIR 297
Q+K L+ G EI++ TPGR+ID L NL+R S++VLDEADR+LD+GFE QI
Sbjct: 836 IARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIY 895
Query: 298 KIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEH 357
I+ R D+Q M SAT+P +Q +A+ L +++ +G T N+NI Q V++ +E
Sbjct: 896 NILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKT-NNNIYQFVEIIEES 954
Query: 358 EKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRV 417
+K ++L LL + + +IFV + +AD + + + + +HG + Q +R
Sbjct: 955 KKVFRLLKLLGEW--IKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDRQFT 1012
Query: 418 LNEFRIGRASILVS 431
L +F+ +L++
Sbjct: 1013 LEKFKKEENKVLIA 1026
Score = 48 (22.0 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 49/200 (24%), Positives = 82/200 (41%)
Query: 481 LVSHYN--KSQQERDRVLN-----EF-RIGRASIL-VSHYNKSQQERDRVLNEFRIGRAS 531
L+ YN Q+ D+ L EF +I L V+ + K ++E+ + N+ +
Sbjct: 1281 LMKTYNFLSLQENHDKFLKNAQYEEFDKIAEKEALKVTEHIKDEKEKKLIFNKTKEDIKK 1340
Query: 532 ILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRAS-ILVSHY- 589
L+ NK Q + +NE I R +L + K+ ++ L I + IL Y
Sbjct: 1341 KLIQ--NKIQSD---TMNE-SIQRNMLLSALRTKNMKKYSPYLPHTYITEDNNILEEFYI 1394
Query: 590 -NKSQQERDRVLNE---FRI----GRASILVSHY-NKSQQERDRVLNEFRIGRASILVSH 640
N Q R ++ ++ +I G + Y N SQ + L + + IL
Sbjct: 1395 NNYPQHVRLKISHKDVLAKIADMSGATCQIKGQYSNPSQPNKQNFLLDTKQLHIEILAPT 1454
Query: 641 YNKSQ---QERDRVLNEFRI 657
YN+ Q E + +LN F I
Sbjct: 1455 YNQIQIARNELNSLLNNFMI 1474
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 559 (201.8 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 129/374 (34%), Positives = 209/374 (55%)
Query: 67 NWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVT-VKGRYY-LLRLESRP----G 120
N+ M+++NK L NH + + Y+ ++T +K + R + G
Sbjct: 656 NYEENGMKKMNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRG 715
Query: 121 KCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTL 180
K PRP+Q+F +C P I++ + + F+ IQ Q P + G D++AIA+TGSGKTL
Sbjct: 716 KNCPRPVQYFYQCGLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTL 775
Query: 181 GYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAP 240
Y+ P I HV Q PLR+ +GPI ++L PTREL+ Q++ A + A + V+GG+
Sbjct: 776 SYLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGSN 835
Query: 241 KGPQVKALQTGAEIVIATPGRLIDYLEQGTI---NLHRTSYLVLDEADRMLDMGFEPQIR 297
Q+K L+ G EI++ TPGR+ID L NL+R S++VLDEADR+LD+GFE QI
Sbjct: 836 IARQLKVLKKGVEILVGTPGRIIDILTISNCKVTNLNRVSFVVLDEADRLLDLGFESQIY 895
Query: 298 KIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEH 357
I+ R D+Q M SAT+P +Q +A+ L +++ +G T N+NI Q V++ +E
Sbjct: 896 NILRNCRKDKQTAMISATFPNYIQNMAKKLLYKPIEIIVGEKGKT-NNNIYQFVEIIEES 954
Query: 358 EKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRV 417
+K ++L LL + + +IFV + +AD + + + + +HG + Q +R
Sbjct: 955 KKVFRLLKLLGEW--IKYGLVLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDRQFT 1012
Query: 418 LNEFRIGRASILVS 431
L +F+ +L++
Sbjct: 1013 LEKFKKEENKVLIA 1026
Score = 48 (22.0 bits), Expect = 1.2e-54, Sum P(2) = 1.2e-54
Identities = 49/200 (24%), Positives = 82/200 (41%)
Query: 481 LVSHYN--KSQQERDRVLN-----EF-RIGRASIL-VSHYNKSQQERDRVLNEFRIGRAS 531
L+ YN Q+ D+ L EF +I L V+ + K ++E+ + N+ +
Sbjct: 1281 LMKTYNFLSLQENHDKFLKNAQYEEFDKIAEKEALKVTEHIKDEKEKKLIFNKTKEDIKK 1340
Query: 532 ILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRAS-ILVSHY- 589
L+ NK Q + +NE I R +L + K+ ++ L I + IL Y
Sbjct: 1341 KLIQ--NKIQSD---TMNE-SIQRNMLLSALRTKNMKKYSPYLPHTYITEDNNILEEFYI 1394
Query: 590 -NKSQQERDRVLNE---FRI----GRASILVSHY-NKSQQERDRVLNEFRIGRASILVSH 640
N Q R ++ ++ +I G + Y N SQ + L + + IL
Sbjct: 1395 NNYPQHVRLKISHKDVLAKIADMSGATCQIKGQYSNPSQPNKQNFLLDTKQLHIEILAPT 1454
Query: 641 YNKSQ---QERDRVLNEFRI 657
YN+ Q E + +LN F I
Sbjct: 1455 YNQIQIARNELNSLLNNFMI 1474
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 522 (188.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 122/317 (38%), Positives = 182/317 (57%)
Query: 124 PRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYI 183
P P+ FEE NF + K I + G+ T +Q P+ +G DL++ A+TGSGKT ++
Sbjct: 163 PAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAFL 222
Query: 184 APAIVHVNSQRPLRSG----EGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGA 239
P + + S + P +++APTREL QI A F T R ++GG
Sbjct: 223 LPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGTCIRPVVIYGGT 282
Query: 240 PKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKI 299
G ++ + G I+ ATPGRL+D +E+G I+L YLVLDEADRMLDMGF ++K+
Sbjct: 283 QTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKL 342
Query: 300 IGQIR-PD---RQVLMWSATWPKEVQKLAEDFL-VDYVQLNIGSLNPTANHNIVQIVDVC 354
I P RQ LM+SAT+P+EVQ+LA +FL DY+ L IG+ + I+ V
Sbjct: 343 ISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVP 402
Query: 355 QEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQER 414
+ ++D KL +L G ERT ++FV+TK+KAD + + + + +IHG++ Q+ER
Sbjct: 403 RLSKRD-KLIEILQSTGGERT---MVFVDTKKKADYLAAFLCQENLPSTSIHGDREQRER 458
Query: 415 DRVLNEFRIGRASILVS 431
+ L +FR G+ ILV+
Sbjct: 459 EIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 54 (24.1 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
++ Q+ER+ L +FR G+ ILV+
Sbjct: 452 DREQREREIALRDFRSGKCQILVA 475
Score = 47 (21.6 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q++R+ L +FR G+ ILV+
Sbjct: 455 QREREIALRDFRSGKCQILVA 475
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 522 (188.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 122/317 (38%), Positives = 182/317 (57%)
Query: 124 PRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYI 183
P P+ FEE NF + K I + G+ T +Q P+ +G DL++ A+TGSGKT ++
Sbjct: 163 PAPLLAFEEANFAQTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSCAQTGSGKTAAFL 222
Query: 184 APAIVHVNSQRPLRSG----EGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGA 239
P + + S + P +++APTREL QI A F T R ++GG
Sbjct: 223 LPIVDRMMKDGVTASAFQKQQEPQCIIVAPTRELINQIFLEARKFVYGTCIRPVVIYGGT 282
Query: 240 PKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKI 299
G ++ + G I+ ATPGRL+D +E+G I+L YLVLDEADRMLDMGF ++K+
Sbjct: 283 QTGHSIRQIMQGCNILCATPGRLLDIIEKGKISLVEVKYLVLDEADRMLDMGFGLDMKKL 342
Query: 300 IGQIR-PD---RQVLMWSATWPKEVQKLAEDFL-VDYVQLNIGSLNPTANHNIVQIVDVC 354
I P RQ LM+SAT+P+EVQ+LA +FL DY+ L IG+ + I+ V
Sbjct: 343 ISYPEMPSKDRRQTLMFSATFPEEVQRLAGEFLKTDYIFLVIGNTCGACSDVQQNILQVP 402
Query: 355 QEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQER 414
+ ++D KL +L G ERT ++FV+TK+KAD + + + + +IHG++ Q+ER
Sbjct: 403 RLSKRD-KLIEILQSTGGERT---MVFVDTKKKADYLAAFLCQENLPSTSIHGDREQRER 458
Query: 415 DRVLNEFRIGRASILVS 431
+ L +FR G+ ILV+
Sbjct: 459 EIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 59 (25.8 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++ Q+ER+ L +FR G+ ILV+
Sbjct: 450 HGDREQREREIALRDFRSGKCQILVA 475
Score = 54 (24.1 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 434 NKSQQERDRVLNEFRIGRASILVS 457
++ Q+ER+ L +FR G+ ILV+
Sbjct: 452 DREQREREIALRDFRSGKCQILVA 475
Score = 47 (21.6 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q++R+ L +FR G+ ILV+
Sbjct: 455 QREREIALRDFRSGKCQILVA 475
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 562 (202.9 bits), Expect = 2.1e-54, P = 2.1e-54
Identities = 139/340 (40%), Positives = 199/340 (58%)
Query: 109 RYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDL 168
+Y + +E+ C P I++F + IM I + PT +Q PI DL
Sbjct: 155 KYDDIPVEATGNNCPPH-IENFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDL 213
Query: 169 VAIAKTGSGKTLGYIAPAIVHVNSQRP---LRS----GE-G-----PIVLVLAPTRELAQ 215
+A A+TGSG T ++ P + + + P L++ G G PI LVLAPTRELA
Sbjct: 214 MACAQTGSGCTAAFLLPILSQIYTDGPGEALKAMKENGRYGRRKQYPISLVLAPTRELAV 273
Query: 216 QIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHR 275
QI A F + R V+GGA Q++ L+ G +++ATPGRL+D +E+G I L
Sbjct: 274 QIYEEARKFSYRSRVRPCVVYGGADTVQQIRDLERGCHLLVATPGRLVDMMERGKIGLDF 333
Query: 276 TSYLVLDEADRMLDMGFEPQIRKIIGQ--IRPD--RQVLMWSATWPKEVQKLAEDFLVDY 331
YLVLDEADRMLDMGFEPQIR+I+ Q + P R +M+SAT+PKE+Q LA DFL +Y
Sbjct: 334 CKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEY 393
Query: 332 VQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDI 391
+ L +G + T+ NI Q V +E +K L LL+ G R S T++FVETK+ AD +
Sbjct: 394 IFLAVGRVGSTSE-NITQKVVWVEELDKRSFLLDLLNATG--RDSLTLVFVETKKGADSL 450
Query: 392 TRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ + +A +IHG++SQ++R+ L++FR GR ILV+
Sbjct: 451 ENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVA 490
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 527 (190.6 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 133/364 (36%), Positives = 197/364 (54%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKFPA 190
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 191 AILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 250
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ R A GG Q++ +
Sbjct: 251 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 310
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 311 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 428
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF E K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 429 ----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 484
Query: 428 ILVS 431
+LV+
Sbjct: 485 VLVA 488
Score = 51 (23.0 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 466 KDQEERTKAIEAFREGKKDVLVA 488
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 527 (190.6 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 133/364 (36%), Positives = 197/364 (54%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKFPA 190
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 191 AILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 250
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ R A GG Q++ +
Sbjct: 251 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 310
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 311 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 428
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF E K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 429 ----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 484
Query: 428 ILVS 431
+LV+
Sbjct: 485 VLVA 488
Score = 51 (23.0 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 466 KDQEERTKAIEAFREGKKDVLVA 488
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 527 (190.6 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 133/364 (36%), Positives = 197/364 (54%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E FP
Sbjct: 170 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKFPA 217
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 218 AILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 277
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ R A GG Q++ +
Sbjct: 278 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 337
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 338 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 397
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 398 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 455
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF E K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 456 ----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 511
Query: 428 ILVS 431
+LV+
Sbjct: 512 VLVA 515
Score = 51 (23.0 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 493 KDQEERTKAIEAFREGKKDVLVA 515
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 527 (190.6 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 133/364 (36%), Positives = 197/364 (54%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E FP
Sbjct: 161 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKFPA 208
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 209 AILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 268
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ R A GG Q++ +
Sbjct: 269 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 328
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 329 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 388
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 389 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 446
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF E K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 447 ----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 502
Query: 428 ILVS 431
+LV+
Sbjct: 503 VLVA 506
Score = 51 (23.0 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 484 KDQEERTKAIEAFREGKKDVLVA 506
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 527 (190.6 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 133/364 (36%), Positives = 197/364 (54%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKFPA 190
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 191 AILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 250
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ R A GG Q++ +
Sbjct: 251 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 310
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 311 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 428
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF E K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 429 ----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 484
Query: 428 ILVS 431
+LV+
Sbjct: 485 VLVA 488
Score = 51 (23.0 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 466 KDQEERTKAIEAFREGKKDVLVA 488
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
Identities = 128/355 (36%), Positives = 208/355 (58%)
Query: 81 YTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIM 140
YT + S SQ +++ +L+ +++TV+ P RPI F++ I
Sbjct: 118 YTQSSKLSSVSQSDIDKFLSDNEITVED----------PSSSSLRPILSFDQVQLTSAIT 167
Query: 141 KKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSGE 200
K+ + F PT IQ+ WP LSG D++ +A+TGSGKT + PAI ++ + ++
Sbjct: 168 SKLSK--FDKPTPIQSVSWPFLLSGKDVIGVAETGSGKTFAFGVPAINNIITTGNTKTLS 225
Query: 201 GPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPG 260
VL ++PTRELA QI + + + V+GG K Q++ ++T A +V+ATPG
Sbjct: 226 ---VLCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQIRKIKT-ANVVVATPG 281
Query: 261 RLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI-RPDRQVLMWSATWPKE 319
RL+D + G INL + +YLVLDEADRML+ GFE I+ II +RQ LM++ATWPKE
Sbjct: 282 RLVDLINDGAINLGKVNYLVLDEADRMLEKGFEEDIKTIISNTSNSERQTLMFTATWPKE 341
Query: 320 VQKLAEDFLVDYVQLNIGSLNP-TANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTS-- 376
V++LA +F+ V++ +G + +AN I Q+V+V + +K+ KL LL + + +S
Sbjct: 342 VRELANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLLRKYNANESSDN 401
Query: 377 KTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
K +IF K++A I ++ ++ AIHG+ SQQ+R L+ F+ G++++L++
Sbjct: 402 KILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLA 456
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 559 (201.8 bits), Expect = 4.3e-54, P = 4.3e-54
Identities = 129/347 (37%), Positives = 196/347 (56%)
Query: 94 EVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTA 153
E S +H+ + Y L G P+ I FEE + K + + G+ PT
Sbjct: 243 EESSIFSHYATGINFDKYDDILVDVSGSNPPKAIMTFEEAGLCDSLSKNVSKSGYVKPTP 302
Query: 154 IQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSG----EGPIVLVLAP 209
+Q G PI +G DL+A A+TGSGKT ++ P + + S + P +++AP
Sbjct: 303 VQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQRFMTDGVAASKFSEIQEPEAIIVAP 362
Query: 210 TRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQG 269
TREL QI A F T R V+GG G ++ + G ++ ATPGRL D + +G
Sbjct: 363 TRELINQIYLEARKFAYGTCVRPVVVYGGINTGYTIREVLKGCNVLCATPGRLHDLIGRG 422
Query: 270 TINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ----IRPDRQVLMWSATWPKEVQKLAE 325
I L + YLVLDEADRMLDMGFEP++RK++ + +RQ LM+SAT+P+++Q++A
Sbjct: 423 KIGLSKVRYLVLDEADRMLDMGFEPEMRKLVASPGMPSKEERQTLMFSATYPEDIQRMAA 482
Query: 326 DFL-VDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVET 384
DFL VDY+ L +G + + +V V Q ++D L+ LL G+ERT ++FVET
Sbjct: 483 DFLKVDYIFLAVGVVGGACSDVEQTVVQVDQYSKRDQLLE-LLRATGNERT---MVFVET 538
Query: 385 KRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
KR AD I + + + +IHG++ Q+ER++ L++FR+G +LV+
Sbjct: 539 KRSADFIATFLCQEKISTTSIHGDREQREREKALSDFRLGHCPVLVA 585
>TIGR_CMR|GSU_0914 [details] [associations]
symbol:GSU_0914 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE017180
GenomeReviews:AE017180_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 OMA:KHRAKRV RefSeq:NP_951968.1
ProteinModelPortal:Q74EP8 GeneID:2687174 KEGG:gsu:GSU0914
PATRIC:22024603 ProtClustDB:CLSK924451
BioCyc:GSUL243231:GH27-925-MONOMER Uniprot:Q74EP8
Length = 447
Score = 532 (192.3 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 122/304 (40%), Positives = 177/304 (58%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F+ F P + I G++ PT IQAQ P ++G D++ +A+TG+GKT + P I+H
Sbjct: 3 FKSFGFHPAVATGIAAAGYETPTPIQAQAIPAVMAGRDVMGLAQTGTGKTAAFALP-ILH 61
Query: 190 VNSQRPLRSGE-GPI-VLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
R L+ GE G + LV+APTRELA+QI G T R V+GG PQV+
Sbjct: 62 ----R-LQQGERGRVRALVIAPTRELAEQINDSFVTLGRQTRLRSVTVYGGVGVNPQVQK 116
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ GAE+V+A PGRL+D++ QGTI+L R LVLDEAD+M DMGF P IR+++ + P R
Sbjct: 117 LKAGAEVVVACPGRLLDHIAQGTIDLSRLEVLVLDEADQMFDMGFLPDIRRVLKHLPPRR 176
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q L++SAT P +++ LA+D LVD V + +G++ P + + ++H K L LL
Sbjct: 177 QTLLFSATMPIDIRTLAQDILVDPVTVQVGTVAPAVT--VAHALYPVEQHLKTPLLLELL 234
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+E +IF TK +A + + G+ A ++ GN SQ R L+ FR G
Sbjct: 235 RHTDTE---SVLIFTRTKHRAKRLGEQLEKAGYRAASLQGNLSQNRRQAALDGFRDGTFQ 291
Query: 428 ILVS 431
ILV+
Sbjct: 292 ILVA 295
Score = 44 (20.5 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 486 NKSQQERDRVLNEFRIGRASILVS 509
N SQ R L+ FR G ILV+
Sbjct: 272 NLSQNRRQAALDGFRDGTFQILVA 295
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 525 (189.9 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 133/364 (36%), Positives = 197/364 (54%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E FP
Sbjct: 143 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKFPA 190
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 191 AILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 250
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ R A GG Q++ +
Sbjct: 251 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 310
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 311 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 428
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF E K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 429 ----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 484
Query: 428 ILVS 431
+LV+
Sbjct: 485 VLVA 488
Score = 51 (23.0 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 466 KDQEERTKAIEAFREGKKDVLVA 488
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 536 (193.7 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 128/320 (40%), Positives = 178/320 (55%)
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
P+ F + + ++ I + PT +Q PI L DL+A A+TGSGKT ++ P
Sbjct: 245 PLNSFADVDLGDVLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFP 304
Query: 186 AIVHV----NSQRPLRSGEG------PIVLVLAPTRELAQQIETVANDFGSATATRVACV 235
I + + P G P LVLAPTRELAQQI AN F + +
Sbjct: 305 IISGILLDGAPEAPPAYKPGVPRAACPRALVLAPTRELAQQIFDEANKFSYGSPVSSVVI 364
Query: 236 FGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQ 295
+GGA Q+ L G +I++AT GRL+D L +G ++L + YLVLDEADRMLDMGFEPQ
Sbjct: 365 YGGAEVFHQINELDRGCDILVATTGRLVDLLMRGRVSLSKIKYLVLDEADRMLDMGFEPQ 424
Query: 296 IRKIIGQI-RP---DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIV 351
IR+II + P DRQ LM+SAT+PK++Q LA DFL +Y+ L +G + T NI Q +
Sbjct: 425 IRQIISEFDMPGCRDRQTLMFSATFPKQIQNLAADFLYNYIFLKVGVVGTT--QNITQRI 482
Query: 352 DVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQ 411
+ E +K+ L LS + S+ +IFVETKR D +T + + + IHG+ +Q
Sbjct: 483 EYVVEEDKNSYLLDYLSGLKSD--GLCLIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQ 540
Query: 412 QERDRVLNEFRIGRASILVS 431
ER+ L FR LV+
Sbjct: 541 PERENALQSFRSFATPFLVA 560
Score = 38 (18.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H + +Q ER+ L FR LV+
Sbjct: 535 HGDLTQPERENALQSFRSFATPFLVA 560
Score = 38 (18.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H + +Q ER+ L FR LV+
Sbjct: 535 HGDLTQPERENALQSFRSFATPFLVA 560
Score = 38 (18.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q ER+ L FR LV+
Sbjct: 535 HGDLTQPERENALQSFRSFATPFLVA 560
Score = 38 (18.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q ER+ L FR LV+
Sbjct: 535 HGDLTQPERENALQSFRSFATPFLVA 560
Score = 38 (18.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q ER+ L FR LV+
Sbjct: 535 HGDLTQPERENALQSFRSFATPFLVA 560
Score = 38 (18.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q ER+ L FR LV+
Sbjct: 535 HGDLTQPERENALQSFRSFATPFLVA 560
Score = 38 (18.4 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q ER+ L FR LV+
Sbjct: 535 HGDLTQPERENALQSFRSFATPFLVA 560
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 524 (189.5 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 127/315 (40%), Positives = 183/315 (58%)
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAP 185
PI F+E + + + + ++ PT IQA WP L+G D+V IA+TGSGKT+ + P
Sbjct: 165 PILQFDELDVSAKLREGL--KNYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIP 222
Query: 186 AIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQV 245
A+ ++N +S P VLV++PTRELA Q N T + V+GGAPK Q
Sbjct: 223 ALQYLNGLSDNKSV--PRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQA 280
Query: 246 KALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRP 305
+A + A ++I TPGRL+D + G+I+ + YLVLDEADRMLD GFE IR II P
Sbjct: 281 RAAKN-ASVIIGTPGRLLDLINDGSIDCSQVGYLVLDEADRMLDTGFEQDIRNIISHT-P 338
Query: 306 D------RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQE-HE 358
D RQ + +SATWP+ V+ LA FL D V++ IGS A+ NI QIV++ +
Sbjct: 339 DPTRNGSRQTVFFSATWPESVRALAATFLKDPVKITIGSDELAASQNITQIVEILDDPRS 398
Query: 359 KDYKLQGLLSQIGSE--RTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDR 416
K+ L LL + S + K +IFV K++A + ++ K + V IHG+ SQ R +
Sbjct: 399 KERMLDNLLRKHLSSGGKDDKILIFVLYKKEAARVEGTLARK-YNVVGIHGDMSQGARLQ 457
Query: 417 VLNEFRIGRASILVS 431
LN+F+ G+ +LV+
Sbjct: 458 ALNDFKSGKCPVLVA 472
Score = 50 (22.7 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H + SQ R + LN+F+ G+ +LV+
Sbjct: 447 HGDMSQGARLQALNDFKSGKCPVLVA 472
Score = 50 (22.7 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + SQ R + LN+F+ G+ +LV+
Sbjct: 447 HGDMSQGARLQALNDFKSGKCPVLVA 472
Score = 50 (22.7 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + SQ R + LN+F+ G+ +LV+
Sbjct: 447 HGDMSQGARLQALNDFKSGKCPVLVA 472
Score = 50 (22.7 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + SQ R + LN+F+ G+ +LV+
Sbjct: 447 HGDMSQGARLQALNDFKSGKCPVLVA 472
Score = 50 (22.7 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + SQ R + LN+F+ G+ +LV+
Sbjct: 447 HGDMSQGARLQALNDFKSGKCPVLVA 472
Score = 50 (22.7 bits), Expect = 7.8e-54, Sum P(2) = 7.8e-54
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + SQ R + LN+F+ G+ +LV+
Sbjct: 447 HGDMSQGARLQALNDFKSGKCPVLVA 472
Score = 45 (20.9 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 436 SQQERDRVLNEFRIGRASILVS 457
SQ R + LN+F+ G+ +LV+
Sbjct: 451 SQGARLQALNDFKSGKCPVLVA 472
Score = 45 (20.9 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 462 SQQKRDRVLNEFRIGRASILVS 483
SQ R + LN+F+ G+ +LV+
Sbjct: 451 SQGARLQALNDFKSGKCPVLVA 472
>UNIPROTKB|J3QSF1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000579996
Uniprot:J3QSF1
Length = 153
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 105/150 (70%), Positives = 126/150 (84%)
Query: 251 GAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVL 310
G EI IATPGRLID+LE G NL RT+YLVLDEADRMLDMGFEPQIRKI+ QIRPDRQ L
Sbjct: 3 GVEICIATPGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTL 62
Query: 311 MWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQI 370
MWSATWPKEV++LAEDFL DY+ +NIG+L +ANHNI+QIVDVC + EKD KL L+ +I
Sbjct: 63 MWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEI 122
Query: 371 GSERTSKTIIFVETKRKADDITRSVRNKGW 400
SE+ +KTI+FVETKR+ D++TR +R G+
Sbjct: 123 MSEKENKTIVFVETKRRCDELTRKMRRDGY 152
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 555 (200.4 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 120/315 (38%), Positives = 187/315 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
GK P+PIQ + + + + + ++ PT+IQAQ P ++G DL+ IA+TGSGKT
Sbjct: 501 GKDCPKPIQSWAQAGLTEKVHLLLKKFQYEKPTSIQAQTIPAIMNGRDLIGIARTGSGKT 560
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGA 239
L ++ P H+ +Q GEG I L+++PTRELA QI F R ACV+GGA
Sbjct: 561 LAFLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGGA 620
Query: 240 PKGPQVKALQTGAEIVIATPGRLIDYL---EQGTINLHRTSYLVLDEADRMLDMGFEPQI 296
Q+ L+ GA+IV+ TPGR+ID L + NL R ++LVLDEADRM DMGF PQI
Sbjct: 621 SISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGFGPQI 680
Query: 297 RKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQE 356
I+ IRPDRQ +M+SAT+P +V+ +A+ L +++ G + ++ +I Q V+V
Sbjct: 681 NCIVDSIRPDRQTIMFSATFPPKVENVAKKILNKPLEIIAGGRSIVSS-DIEQFVEVRPT 739
Query: 357 HEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDR 416
+ +L LLS I + + +IF + D++ R + N + +++HG+K Q +RD
Sbjct: 740 ETRFRRLIELLS-IWYHK-GQILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDE 797
Query: 417 VLNEFRIGRASILVS 431
+++F+ +IL++
Sbjct: 798 TISDFKNKVKTILIA 812
Score = 37 (18.1 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 67 NWNSMSMEQINKNLYTPNHLTVSRSQGEVESYLNHH 102
N N+ + N N N R+ Y NHH
Sbjct: 55 NNNNNNNNNNNNNNNNGNGYRDDRNYSSQNKYQNHH 90
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 519 (187.8 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 132/364 (36%), Positives = 196/364 (53%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E P
Sbjct: 143 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKLPA 190
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 191 AILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 250
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ R A GG Q++ +
Sbjct: 251 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETI 310
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G +++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 311 RHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 370
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 371 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 428
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF E K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 429 ----QKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 484
Query: 428 ILVS 431
+LV+
Sbjct: 485 VLVA 488
Score = 51 (23.0 bits), Expect = 2.0e-53, Sum P(2) = 2.0e-53
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 466 KDQEERTKAIEAFREGKKDVLVA 488
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 514 (186.0 bits), Expect = 7.6e-53, Sum P(2) = 7.6e-53
Identities = 131/364 (35%), Positives = 195/364 (53%)
Query: 78 KNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPP 137
K +TP +S S+ H+ V+ +Y++L +E G +P PI+ F+E P
Sbjct: 142 KTSWTPPRYVLSMSE-------ERHE-RVRKKYHIL-VE---GDGIPPPIKSFKEMKLPA 189
Query: 138 YIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQR--- 194
I++ + + G PT IQ QG P LSG D++ IA TGSGKTL + P I+ Q
Sbjct: 190 AILRGLKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRL 249
Query: 195 PLRSGEGPIVLVLAPTRELAQQIETVANDF------GSATATRVACVFGGAPKGPQVKAL 248
P EGP L++ P+RELA+Q + + S+ A GG Q++ +
Sbjct: 250 PFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLHCALCIGGVSLKEQMETM 309
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G I++ATPGRL+D L++ ++L YL LDEADRM+DMGFE IR I + RQ
Sbjct: 310 RHGVHIMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQ 369
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLL 367
L++SAT PK++Q A+ LV V +N+G A+ +++Q V+ +E K Y L+ L
Sbjct: 370 TLLFSATMPKKIQNFAKSALVKPVTINVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL- 427
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ +IF + K D I + KG AVAIHG K Q+ER + + FR G+
Sbjct: 428 ----QKTPPPVLIFAKKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKD 483
Query: 428 ILVS 431
+LV+
Sbjct: 484 VLVA 487
Score = 51 (23.0 bits), Expect = 7.6e-53, Sum P(2) = 7.6e-53
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + FR G+ +LV+
Sbjct: 465 KDQEERTKAIEAFREGKKDVLVA 487
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 125/345 (36%), Positives = 197/345 (57%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S +H+ + + Y L G +P I FEE + I G+ PT +Q
Sbjct: 149 DSIFSHYKMGINFDKYDDILVDVSGTNLPAAIMTFEEAKLCESLENNISRSGYVKPTPVQ 208
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRSG----EGPIVLVLAPTR 211
G PI +G DL+A A+TGSGKT ++ P + + + S + P +++APTR
Sbjct: 209 KYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQLMADGVAASRFSEIQEPEAVIVAPTR 268
Query: 212 ELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTI 271
EL QI A F T R V+GG G Q++ ++ G ++ TPGRL+D + +G +
Sbjct: 269 ELINQIYQEARKFSFGTCVRPVVVYGGVNTGYQMREIEKGCNVLCGTPGRLLDMIGRGKV 328
Query: 272 NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQ----IRPDRQVLMWSATWPKEVQKLAEDF 327
L + +LVLDEADRMLDMGFEP +R+++G + +RQ LM+SAT+P+++Q+LA DF
Sbjct: 329 GLSKVRHLVLDEADRMLDMGFEPDMRRLVGSPGMPSKEERQTLMFSATFPEDIQRLAADF 388
Query: 328 L-VDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKR 386
L VDY+ + +G + + V + ++++ +L LL IGSERT ++FVETKR
Sbjct: 389 LKVDYLFVAVGVVGGACTDVEQTFLQVTKFNKRE-QLLDLLRTIGSERT---MVFVETKR 444
Query: 387 KADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+AD I + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 445 QADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLVA 489
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 514 (186.0 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 123/346 (35%), Positives = 189/346 (54%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 241 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 300
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 301 KYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASR-FKELQEPECIIVAPT 359
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 360 RELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEK 419
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ L++SAT+P+E+Q+LA +
Sbjct: 420 IGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGE 479
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + I+ V +K KL +L IG ER ++FVETK
Sbjct: 480 FLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKR-KLVEILRNIGDERP---MVFVETK 535
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 536 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 514 (186.0 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 123/346 (35%), Positives = 189/346 (54%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 241 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 300
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 301 KYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASR-FKELQEPECIIVAPT 359
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 360 RELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEK 419
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ L++SAT+P+E+Q+LA +
Sbjct: 420 IGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGE 479
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + I+ V +K KL +L IG ER ++FVETK
Sbjct: 480 FLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKR-KLVEILRNIGDERP---MVFVETK 535
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 536 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
Score = 62 (26.9 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++ Q+ER++ L +FR G+ +LV+
Sbjct: 556 HGDREQREREQALGDFRCGKCPVLVA 581
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
Identities = 149/471 (31%), Positives = 243/471 (51%)
Query: 71 MSMEQINKNL-YTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQH 129
MS+ ++ K + YT LT + + + ++ +++++ G +P PI++
Sbjct: 92 MSVRELAKGITYTEPLLTGWKPPLHIRKMSSKQRDLIRKQWHIIV----NGDDIPPPIKN 147
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F++ FP ++ + E G PT IQ QG P+ L+G D++ IA TGSGKTL ++ P I+
Sbjct: 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIMI 207
Query: 190 VNSQR---PLRSGEGPIVLVLAPTRELAQQIETVANDF-------GSATATRVACVFGGA 239
+ P+ +GEGPI L++ P+RELA+Q V F G + C+ GG
Sbjct: 208 ALQEEMMMPIAAGEGPIGLIVCPSRELARQTYEVVEQFVAPLVEAGYPPLRSLLCI-GGI 266
Query: 240 PKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKI 299
Q++ ++ G IV+ATPGRL D L + ++L YL LDEADR++D+GFE IR++
Sbjct: 267 DMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIREV 326
Query: 300 IGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVD-VCQEHE 358
+ RQ L++SAT P ++Q A LV V +N+G AN +++Q V+ V QE +
Sbjct: 327 FDHFKSQRQTLLFSATMPTKIQIFARSALVKPVTVNVGRAG-AANLDVIQEVEYVKQEAK 385
Query: 359 KDYKLQGLLSQIGSERTSKTI-IFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRV 417
Y L+ L ++TS + IF E K DDI + KG AVAIHG K Q++R+
Sbjct: 386 IVYLLECL------QKTSPPVLIFCENKADVDDIHEYLLLKGVEAVAIHGGKDQEDREYA 439
Query: 418 LNEFRIGRASILVSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGR 477
++ F+ G+ +LV+ + + + D F + I E + R+ R G+
Sbjct: 440 ISSFKAGKKDVLVAT-DVASKGLD-----FPDIQHVINYDMPAEIENYVHRIGRTGRCGK 493
Query: 478 ASILVSHYNKSQQERD-----RVLNEFRIGRASILVSHYNKSQQERDRVLN 523
I + NK+Q E +L E + R +++ N +E + + N
Sbjct: 494 TGIATTFINKNQSETTLLDLKHLLQEAK-QRIPPVLAELNDPMEEAETIAN 543
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 533 (192.7 bits), Expect = 2.4e-51, P = 2.4e-51
Identities = 126/346 (36%), Positives = 192/346 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 229 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 288
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 289 KYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASR-FKELQEPECIIVAPT 347
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G V+ + G I+ ATPGRL+D + +
Sbjct: 348 RELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSVRQIVQGCNILCATPGRLMDIIGKEK 407
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ L++SAT+P+E+Q+LA D
Sbjct: 408 IGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGD 467
Query: 327 FLVD-YVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL Y+ + +G + A ++ Q + ++ K KL +L IG ERT ++FVETK
Sbjct: 468 FLKSSYLFVAVGQVGG-ACRDVQQTILQVGQYSKREKLVEILRNIGDERT---MVFVETK 523
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 524 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 569
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/346 (36%), Positives = 192/346 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 236 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 295
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 296 KYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASR-FKELQEPECIIVAPT 354
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 355 RELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK 414
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+E+Q+LA +
Sbjct: 415 IGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAE 474
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + A ++ Q V + K KL +L IG ERT ++FVETK
Sbjct: 475 FLKSNYLFVAVGQVGG-ACRDVQQTVLQVGQFSKREKLVEILRNIGDERT---MVFVETK 530
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 531 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVA 576
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 126/346 (36%), Positives = 192/346 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 256 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 315
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 316 KYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASR-FKELQEPECIIVAPT 374
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 375 RELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK 434
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+E+Q+LA +
Sbjct: 435 IGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAE 494
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + A ++ Q V + K KL +L IG ERT ++FVETK
Sbjct: 495 FLKSNYLFVAVGQVGG-ACRDVQQTVLQVGQFSKREKLVEILRNIGDERT---MVFVETK 550
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 551 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVA 596
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 126/347 (36%), Positives = 192/347 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 254 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 313
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 314 KYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASR-FKELQEPECIIVAPT 372
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 373 RELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK 432
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+E+Q+LA +
Sbjct: 433 IGLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAE 492
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDV-CQEHEKDYKLQGLLSQIGSERTSKTIIFVET 384
FL +Y+ + +G + VQ D+ ++ K KL +L IG ERT ++FVET
Sbjct: 493 FLKSNYLFVAVGQVGGACRD--VQQADLQVGQYSKREKLLEILRNIGDERT---MVFVET 547
Query: 385 KRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
K+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 548 KKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVA 594
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 532 (192.3 bits), Expect = 5.6e-51, P = 5.6e-51
Identities = 125/346 (36%), Positives = 193/346 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 257 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 316
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 317 KYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASR-FKELQEPECIIVAPT 375
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 376 RELINQIYLEARKFSFGTCVRAVVIYGGTQLGYSIRQIVQGCNILCATPGRLMDIIGKEK 435
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+E+Q+LA +
Sbjct: 436 IGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGE 495
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + A ++ Q + ++ K KL +L IG ERT ++FVETK
Sbjct: 496 FLKSNYLFVAVGQVGG-ACRDVQQTILQVGQYSKREKLVEILRSIGDERT---MVFVETK 551
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 552 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 597
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 125/346 (36%), Positives = 191/346 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 230 DSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 289
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI L+G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 290 KYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASR-FKELQEPECIIVAPT 348
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 349 RELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQIVQGCNILCATPGRLMDIIGKEK 408
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ L++SAT+P+E+Q+LA +
Sbjct: 409 IGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLLFSATFPEEIQRLAGE 468
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + I+ V Q + K KL +L IG ERT ++FVETK
Sbjct: 469 FLKSNYLFVAVGQVGGACRDVQQSILQVGQ-YSKREKLVEILRNIGDERT---MVFVETK 524
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 525 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 570
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 120/302 (39%), Positives = 172/302 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F+ I+ + + G+ APT IQ Q P+ + G D+V +A+TG+GKTL + AP +
Sbjct: 9 FQSLGLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDR 68
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
++ G VLVLAPTRELA QI T +G+ RV V GGA G Q++ L+
Sbjct: 69 LSRNASPAPVRGTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQIRQLE 128
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
GA I++ATPGRLID +EQ ++L + L+LDEAD+MLD+GF +R I + RQ
Sbjct: 129 RGAHILVATPGRLIDLMEQRAVSLDKVETLILDEADQMLDLGFIHALRAIAKNVPSKRQT 188
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L +SAT PK V+ LA FL + ++++ TA I Q V ++ EK L L+ +
Sbjct: 189 LFFSATMPKAVESLAATFLRNPAEVSVAPPATTAGR-IEQRVCFVEQPEKA-SL--LIEK 244
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I I+F TK AD + + + +VAIHGNKSQ +R++ L F+ GR IL
Sbjct: 245 IRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVPIL 304
Query: 430 VS 431
V+
Sbjct: 305 VA 306
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 528 (190.9 bits), Expect = 3.6e-50, P = 3.6e-50
Identities = 125/345 (36%), Positives = 191/345 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 257 DSIFAHYQTGISFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 316
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVN----SQRPLRSGEGPIVLVLAPTR 211
PI L+G DL+A A+TGSGKT ++ P + H+ + + + P +++APTR
Sbjct: 317 KYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASCFKELQEPECIIVAPTR 376
Query: 212 ELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTI 271
EL QI A F T R ++GG G ++ + G I+ ATPGRL+D + + I
Sbjct: 377 ELVNQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKI 436
Query: 272 NLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAEDF 327
L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+E+Q+LA +F
Sbjct: 437 GLKQIKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEF 496
Query: 328 LV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKR 386
L +Y+ + +G + A ++ Q V + K KL +L IG ERT ++FVETK+
Sbjct: 497 LKSNYLFVAVGQVGG-ACRDVQQTVLQVGQFSKREKLVEILRNIGDERT---MVFVETKK 552
Query: 387 KADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 553 KADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 597
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 122/323 (37%), Positives = 175/323 (54%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ +P PI F+E P ++ + E G + P+ IQ QG P+ LSG D++ IA TGSGKT
Sbjct: 214 GEDIPPPITTFKEMKIPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKT 273
Query: 180 LGYIAPAIVHVNSQR---PLRSGEGPIVLVLAPTRELAQQIETVANDF-------GSATA 229
L + P ++ + P+ GEGP L+L P+RELA+Q + N F G
Sbjct: 274 LVFTLPMVLFALEEECKLPIIQGEGPFGLILCPSRELARQTYDLVNSFTNALHKNGGHPQ 333
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD 289
R GG Q + G ++IATPGRL+D L + IN YL LDEADR++D
Sbjct: 334 LRTLLAIGGIDLREQEHIFKKGVHMIIATPGRLLDLLNKKKINFKLCKYLGLDEADRLID 393
Query: 290 MGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ 349
+GFE IR ++ RQ L++SAT PK++Q+ A LV V++N+G AN N+ Q
Sbjct: 394 LGFEDDIRSVLDNFTNQRQTLLFSATMPKKIQEFARSALVLPVEVNVGRAG-AANLNVTQ 452
Query: 350 IVDVCQEHEKD-YKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGN 408
V+ + K Y L+ L + +IF E K+ DDI + K AV+IHG+
Sbjct: 453 EVEFVKPEAKIVYLLECL-----QKTPPPVLIFCENKKDVDDIYEYLLLKQVEAVSIHGD 507
Query: 409 KSQQERDRVLNEFRIGRASILVS 431
KSQ ER+ + FR G+ +LV+
Sbjct: 508 KSQDERESAIKAFREGKKDVLVA 530
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 123/323 (38%), Positives = 174/323 (53%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ PI+ F E FP I+ + G + PT IQ QG P L+G DL+ IA TGSGKT
Sbjct: 169 GETPSPPIRSFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKT 228
Query: 180 LGYIAPAIVHVNSQR---PLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT------ 230
L ++ P I+ Q P EGP L++ P+RELA+Q + +
Sbjct: 229 LVFVLPVIMFALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEI 288
Query: 231 RVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDM 290
R GG P + + G IV+ATPGRL+D L++ + L YL +DEADRM+DM
Sbjct: 289 RSCLAMGGLPVSEALDVISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDM 348
Query: 291 GFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQI 350
GFE +R I + RQ L++SAT PK++Q A LV V +N+G A+ N+ Q
Sbjct: 349 GFEEDVRTIFSFFKGQRQTLLFSATMPKKIQNFARSALVKPVTINVGRAG-AASMNVTQQ 407
Query: 351 VD-VCQEHEKDYKLQGLLSQIGSERTSKTI-IFVETKRKADDITRSVRNKGWAAVAIHGN 408
V+ V QE + Y L L ++T+ + IF E K+ D I + KG AVAIHG
Sbjct: 408 VEYVKQEAKVVYLLDCL------QKTAPPVLIFAEKKQDVDCIHEYLLLKGVEAVAIHGG 461
Query: 409 KSQQERDRVLNEFRIGRASILVS 431
K Q+ER R ++ +R+G+ +LV+
Sbjct: 462 KDQEERSRAVDAYRVGKKDVLVA 484
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 518 (187.4 bits), Expect = 9.5e-50, P = 9.5e-50
Identities = 113/303 (37%), Positives = 171/303 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F+ P I++ + E G++ PT IQ Q P L G DL+A A+TG+GKT G+ P + H
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 190 VNSQRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKAL 248
+ +++P G P+ L+L PTRELA QI D+ R VFGG PQ+ L
Sbjct: 63 LITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMMKL 122
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G ++++ATPGRL+D Q + L + LVLDEADRMLDMGF IR+++ ++ RQ
Sbjct: 123 RGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHDIRRVLTKLPAKRQ 182
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS 368
L++SAT+ +++ LAE L + +++ + N TA+ + Q V +K K + L
Sbjct: 183 NLLFSATFSDDIKALAEKLLHNPLEIEVARRN-TASDQVTQHVHFV---DKKRKRELLSH 238
Query: 369 QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
IG + ++F TK A+ + + G + AIHGNKSQ R R L +F+ G +
Sbjct: 239 MIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298
Query: 429 LVS 431
LV+
Sbjct: 299 LVA 301
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 524 (189.5 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 124/346 (35%), Positives = 191/346 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 258 DSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 317
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 318 KYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASR-FKELQEPECIIVAPT 376
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 377 RELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEK 436
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+E+Q+LA +
Sbjct: 437 IGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGE 496
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + A ++ Q + ++ K KL +L IG ERT ++FVETK
Sbjct: 497 FLKSNYLFVAVGQVGG-ACRDVQQTILQVGQYSKREKLVEILRNIGDERT---MVFVETK 552
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 553 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 598
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 524 (189.5 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 124/346 (35%), Positives = 191/346 (55%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
+S H+ + Y L G P I FEE N + I + G+ T +Q
Sbjct: 258 DSIFAHYQTGINFDKYDTILVEVSGHDPPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQ 317
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
PI G DL+A A+TGSGKT ++ P + H + + R + + P +++APT
Sbjct: 318 KYSIPIIQGGRDLMACAQTGSGKTAAFLLPILAHMMRDGITASR-FKELQEPECIIVAPT 376
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 377 RELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDVIGKEK 436
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPKEVQKLAED 326
I L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+E+Q+LA +
Sbjct: 437 IGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAGE 496
Query: 327 FLV-DYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETK 385
FL +Y+ + +G + A ++ Q + ++ K KL +L IG ERT ++FVETK
Sbjct: 497 FLKSNYLFVAVGQVGG-ACRDVQQTILQVGQYSKREKLVEILRNIGDERT---MVFVETK 552
Query: 386 RKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 553 KKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 598
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 513 (185.6 bits), Expect = 3.5e-49, P = 3.5e-49
Identities = 125/323 (38%), Positives = 179/323 (55%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEM-GFQAPTAIQAQGWPIALSGCDLVAIAKTGSGK 178
G +P PI F E FP +++ + + G PTAIQ QG P+ALSG D++ IA TGSGK
Sbjct: 181 GDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGK 240
Query: 179 TLGYIAPAIVHVNSQR---PLRSGEGPIVLVLAPTRELAQQI-ETVANDF---GSA--TA 229
T+ ++ P ++ Q P EGP L++ P+RELA+QI + + F G A
Sbjct: 241 TMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDALGKAGLPE 300
Query: 230 TRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD 289
R GG P G Q K ++ G IV+ATPGRL D L + INL YLVLDEADRMLD
Sbjct: 301 MRAGLCIGGVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLD 360
Query: 290 MGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ 349
MGFE +I+ I + RQ L++SAT P+++Q A+ LV + +N+G A+ N++Q
Sbjct: 361 MGFEDEIKSIFYFFKAQRQTLLFSATMPRKIQFFAKSALVKPIVVNVGRAG-AASLNVLQ 419
Query: 350 IVDVCQEHEKDYKLQGLLSQIGSERTS-KTIIFVETKRKADDITRSVRNKGWAAVAIHGN 408
++ + K ++ L ++TS K +IF E K D+I + KG +IHG
Sbjct: 420 ELEFVRSENKLVRVLECL-----QKTSPKVLIFAEKKVDVDNIYEYLLVKGVEVASIHGG 474
Query: 409 KSQQERDRVLNEFRIGRASILVS 431
K Q +R + FR +LV+
Sbjct: 475 KDQSDRHAGIEAFRKNEKDVLVA 497
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 512 (185.3 bits), Expect = 4.5e-49, P = 4.5e-49
Identities = 113/306 (36%), Positives = 173/306 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
FE +++ I E G+ PT +Q Q P+ L D++ A+TG+GKT G+ P +
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 190 VNSQRP-LRSGEGPIV--LVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVK 246
+ RP L+ P++ L+L PTRELA Q+ +G + V GG PQ+
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQIN 131
Query: 247 ALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD 306
L+ G +I++ATPGRL+D + QG +NL R + VLDEADRMLDMGF P IR+I+ +
Sbjct: 132 HLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPES 191
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ L++SAT+ KE+++L + L + + N TA I +V K + L
Sbjct: 192 RQNLLFSATFSKEIKELTDKLLHSPALIEVARRN-TAAARITHVVHPVDRQRK----REL 246
Query: 367 LS-QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
LS IGS+ + ++F TK A+ +++ + + G ++ AIHGNKSQ R R L +F+ G+
Sbjct: 247 LSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGK 306
Query: 426 ASILVS 431
+LV+
Sbjct: 307 IRVLVA 312
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 512 (185.3 bits), Expect = 4.5e-49, P = 4.5e-49
Identities = 113/306 (36%), Positives = 173/306 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
FE +++ I E G+ PT +Q Q P+ L D++ A+TG+GKT G+ P +
Sbjct: 12 FEVLGLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQR 71
Query: 190 VNSQRP-LRSGEGPIV--LVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVK 246
+ RP L+ P++ L+L PTRELA Q+ +G + V GG PQ+
Sbjct: 72 LFVSRPPLQRSAKPVIRALILTPTRELAVQVFECVRAYGKYLPLKATVVHGGVSIKPQIN 131
Query: 247 ALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD 306
L+ G +I++ATPGRL+D + QG +NL R + VLDEADRMLDMGF P IR+I+ +
Sbjct: 132 HLRRGVDILVATPGRLLDLVNQGVLNLSRVEFFVLDEADRMLDMGFLPDIRRILKLLPES 191
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ L++SAT+ KE+++L + L + + N TA I +V K + L
Sbjct: 192 RQNLLFSATFSKEIKELTDKLLHSPALIEVARRN-TAAARITHVVHPVDRQRK----REL 246
Query: 367 LS-QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
LS IGS+ + ++F TK A+ +++ + + G ++ AIHGNKSQ R R L +F+ G+
Sbjct: 247 LSFMIGSKNWRQVLVFTRTKHGANRLSQQLESDGLSSAAIHGNKSQAARMRALTQFKQGK 306
Query: 426 ASILVS 431
+LV+
Sbjct: 307 IRVLVA 312
>TIGR_CMR|DET_0183 [details] [associations]
symbol:DET_0183 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000027 GenomeReviews:CP000027_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_180931.1 ProteinModelPortal:Q3ZA18
STRING:Q3ZA18 GeneID:3230538 KEGG:det:DET0183 PATRIC:21607443
OMA:NFAPAVM ProtClustDB:CLSK837629
BioCyc:DETH243164:GJNF-183-MONOMER Uniprot:Q3ZA18
Length = 560
Score = 488 (176.8 bits), Expect = 6.9e-49, Sum P(2) = 6.9e-49
Identities = 111/305 (36%), Positives = 169/305 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
FE NF P +M + G+Q PT IQAQ P L G D++ +A+TG+GKT Y P I
Sbjct: 3 FESFNFAPAVMAGVRACGYQEPTPIQAQAIPPILEGHDVIGLAQTGTGKTAAYALPVI-- 60
Query: 190 VNSQRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKAL 248
Q+ L + G + LVLAPTRELA QI G R ++GG Q++ L
Sbjct: 61 ---QKMLSTPRGRVRTLVLAPTRELACQIAESFRSLGQRARIRECSIYGGVNMDQQIRRL 117
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
++G ++V+A PGRL+D++ +GTI++ L++DEADRM DMGF+P I+ I+ + Q
Sbjct: 118 RSGVDVVVACPGRLLDHIWRGTIDICGVETLIIDEADRMFDMGFQPDIQSILKCLVQPHQ 177
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTAN--HNIVQIVDVCQEHEKDYKLQGL 366
L++SAT P EV+KL + + V + IG+ P ++ H++ + + H+K L +
Sbjct: 178 TLLFSATMPPEVRKLTLETQTNPVTIQIGTQAPASSVSHSVYPV----KNHQKTPLLIEI 233
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
L + T +IF TK A+++ + G+ ++ GN SQ R V+ FR G
Sbjct: 234 LK---TTETKSVLIFARTKYGAENLADEISRAGFTTASLQGNLSQNRRHAVMEGFRRGNF 290
Query: 427 SILVS 431
ILV+
Sbjct: 291 KILVA 295
Score = 45 (20.9 bits), Expect = 6.9e-49, Sum P(2) = 6.9e-49
Identities = 11/24 (45%), Positives = 13/24 (54%)
Query: 486 NKSQQERDRVLNEFRIGRASILVS 509
N SQ R V+ FR G ILV+
Sbjct: 272 NLSQNRRHAVMEGFRRGNFKILVA 295
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 419 (152.6 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 86/190 (45%), Positives = 122/190 (64%)
Query: 115 LESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKT 174
+ ++ GK +P PI+ +++ + PP+I++ I + G++ PT IQ Q PI L D++ +A+T
Sbjct: 378 ITTKGGK-IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAET 436
Query: 175 GSGKTLGYIAPAIVHVNS----QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT 230
GSGKT ++ P +V + + R S +GP ++LAPTRELAQQIE FG
Sbjct: 437 GSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGI 496
Query: 231 RVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDM 290
R V GG + Q L+ G EIVIATPGRLID LE + L R +Y+VLDEADRM+DM
Sbjct: 497 RTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDM 556
Query: 291 GFEPQIRKII 300
GFEP ++KI+
Sbjct: 557 GFEPDVQKIL 566
Score = 160 (61.4 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ +M++AT P V++LA +L + IGS + + Q V + E EK KL +
Sbjct: 599 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKP-HERVEQKVFLMSESEKRKKLLAI 657
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
L Q G + IIFV K+ D + +S+ G+ A +HG K Q++R+ L+ + G
Sbjct: 658 LEQ-GFD--PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAK 714
Query: 427 SILVS 431
ILV+
Sbjct: 715 DILVA 719
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H K Q++R+ L+ + G ILV+
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVA 719
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K Q++R+ L+ + G ILV+
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVA 719
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K Q++R+ L+ + G ILV+
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVA 719
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K Q++R+ L+ + G ILV+
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVA 719
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K Q++R+ L+ + G ILV+
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVA 719
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K Q++R+ L+ + G ILV+
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVA 719
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K Q++R+ L+ + G ILV+
Sbjct: 694 HGGKGQEQREFALSNLKAGAKDILVA 719
Score = 41 (19.5 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q++R+ L+ + G ILV+
Sbjct: 697 KGQEQREFALSNLKAGAKDILVA 719
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 419 (152.6 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 86/190 (45%), Positives = 122/190 (64%)
Query: 115 LESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKT 174
+ ++ GK +P PI+ +++ + PP+I++ I + G++ PT IQ Q PI L D++ +A+T
Sbjct: 379 ITTKGGK-IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAET 437
Query: 175 GSGKTLGYIAPAIVHVNS----QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT 230
GSGKT ++ P +V + + R S +GP ++LAPTRELAQQIE FG
Sbjct: 438 GSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGI 497
Query: 231 RVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDM 290
R V GG + Q L+ G EIVIATPGRLID LE + L R +Y+VLDEADRM+DM
Sbjct: 498 RTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDM 557
Query: 291 GFEPQIRKII 300
GFEP ++KI+
Sbjct: 558 GFEPDVQKIL 567
Score = 160 (61.4 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ +M++AT P V++LA +L + IGS + + Q V + E EK KL +
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKP-HERVEQKVFLMSESEKRKKLLAI 658
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
L Q G + IIFV K+ D + +S+ G+ A +HG K Q++R+ L+ + G
Sbjct: 659 LEQ-GFD--PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAK 715
Query: 427 SILVS 431
ILV+
Sbjct: 716 DILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 41 (19.5 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q++R+ L+ + G ILV+
Sbjct: 698 KGQEQREFALSNLKAGAKDILVA 720
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 419 (152.6 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 86/190 (45%), Positives = 122/190 (64%)
Query: 115 LESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKT 174
+ ++ GK +P PI+ +++ + PP+I++ I + G++ PT IQ Q PI L D++ +A+T
Sbjct: 379 ITTKGGK-IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAET 437
Query: 175 GSGKTLGYIAPAIVHVNS----QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT 230
GSGKT ++ P +V + + R S +GP ++LAPTRELAQQIE FG
Sbjct: 438 GSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGI 497
Query: 231 RVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDM 290
R V GG + Q L+ G EIVIATPGRLID LE + L R +Y+VLDEADRM+DM
Sbjct: 498 RTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDM 557
Query: 291 GFEPQIRKII 300
GFEP ++KI+
Sbjct: 558 GFEPDVQKIL 567
Score = 160 (61.4 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ +M++AT P V++LA +L + IGS + + Q V + E EK KL +
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKP-HERVEQKVFLMSESEKRKKLLAI 658
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
L Q G + IIFV K+ D + +S+ G+ A +HG K Q++R+ L+ + G
Sbjct: 659 LEQ-GFD--PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAK 715
Query: 427 SILVS 431
ILV+
Sbjct: 716 DILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 41 (19.5 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q++R+ L+ + G ILV+
Sbjct: 698 KGQEQREFALSNLKAGAKDILVA 720
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 419 (152.6 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 86/190 (45%), Positives = 122/190 (64%)
Query: 115 LESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKT 174
+ ++ GK +P PI+ +++ + PP+I++ I + G++ PT IQ Q PI L D++ +A+T
Sbjct: 379 ITTKGGK-IPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAET 437
Query: 175 GSGKTLGYIAPAIVHVNS----QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT 230
GSGKT ++ P +V + + R S +GP ++LAPTRELAQQIE FG
Sbjct: 438 GSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGI 497
Query: 231 RVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDM 290
R V GG + Q L+ G EIVIATPGRLID LE + L R +Y+VLDEADRM+DM
Sbjct: 498 RTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDM 557
Query: 291 GFEPQIRKII 300
GFEP ++KI+
Sbjct: 558 GFEPDVQKIL 567
Score = 160 (61.4 bits), Expect = 3.2e-48, Sum P(2) = 3.2e-48
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ +M++AT P V++LA +L + IGS + + Q V + E EK KL +
Sbjct: 600 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKP-HERVEQKVFLMSESEKRKKLLAI 658
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
L Q G + IIFV K+ D + +S+ G+ A +HG K Q++R+ L+ + G
Sbjct: 659 LEQ-GFD--PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAK 715
Query: 427 SILVS 431
ILV+
Sbjct: 716 DILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 46 (21.3 bits), Expect = 3.0e-36, Sum P(2) = 3.0e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K Q++R+ L+ + G ILV+
Sbjct: 695 HGGKGQEQREFALSNLKAGAKDILVA 720
Score = 41 (19.5 bits), Expect = 1.0e-35, Sum P(2) = 1.0e-35
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q++R+ L+ + G ILV+
Sbjct: 698 KGQEQREFALSNLKAGAKDILVA 720
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 476 (172.6 bits), Expect = 3.5e-48, Sum P(2) = 3.5e-48
Identities = 102/303 (33%), Positives = 169/303 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++K + + G++ P+ IQAQ P +SG D++A A+TG+GKT G+ P +
Sbjct: 8 FTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQR 67
Query: 190 VNSQRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKAL 248
++S + + + L+L PTRELA QI +G VFGG PQ+ L
Sbjct: 68 LSSSKGNKVSSNNVRALILTPTRELAAQISESIEVYGKYLNLHSMVVFGGVKINPQIARL 127
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ G ++++ATPGRL+D Q + + +LDEADRMLDMGF I+K++ + DRQ
Sbjct: 128 RQGVDVLVATPGRLLDLYNQRAVKFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQ 187
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS 368
L++SAT+ E++ LA+ + + +++++ + N TA + Q + + K L L+
Sbjct: 188 NLLFSATFSPEIRALAKGMVNNPLEISVDAENSTAE-KVTQWLTAVDKKRKPAVLTHLIK 246
Query: 369 QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
+ + ++F +TK A+ +T+ + +G A AIHGNKSQ R + L F+ G I
Sbjct: 247 E---NNWQQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGSVKI 303
Query: 429 LVS 431
LV+
Sbjct: 304 LVA 306
Score = 52 (23.4 bits), Expect = 3.5e-48, Sum P(2) = 3.5e-48
Identities = 12/26 (46%), Positives = 15/26 (57%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H NKSQ R + L F+ G ILV+
Sbjct: 281 HGNKSQGARTKALAAFKDGSVKILVA 306
Score = 37 (18.1 bits), Expect = 1.3e-46, Sum P(2) = 1.3e-46
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 461 ESQQKRDRVLNEFRIGRASILVS 483
+SQ R + L F+ G ILV+
Sbjct: 284 KSQGARTKALAAFKDGSVKILVA 306
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 422 (153.6 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48
Identities = 88/193 (45%), Positives = 124/193 (64%)
Query: 115 LESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKT 174
+ ++ GK +P PI++++E + PP+I++ I + G++ PT IQ Q PI L D++ +A+T
Sbjct: 366 ITTKGGK-IPNPIRNWKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNRDIIGVAET 424
Query: 175 GSGKTLGYIAPAIVHVNS----QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT 230
GSGKT ++ P +V + + R S +GP ++LAPTRELAQQIE FG
Sbjct: 425 GSGKTAAFLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETIKFGKPLGI 484
Query: 231 RVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDM 290
R V GG + Q L+ G EIVIATPGRLID LE + L R +Y+VLDEADRM+DM
Sbjct: 485 RTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDM 544
Query: 291 GFEPQIRKIIGQI 303
GFEP ++KI+ I
Sbjct: 545 GFEPDVQKILEYI 557
Score = 155 (59.6 bits), Expect = 4.2e-48, Sum P(2) = 4.2e-48
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ +M++AT P V++LA +L + IGS + + Q V + E EK KL +
Sbjct: 587 RQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKP-HERVEQKVILMSEGEKRKKLLEV 645
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
L+ G E IIFV K+ D + +S+ G+ A +HG K Q++R+ L+ + G
Sbjct: 646 LAS-GFE--PPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAK 702
Query: 427 SILVS 431
ILV+
Sbjct: 703 DILVA 707
Score = 47 (21.6 bits), Expect = 9.3e-37, Sum P(2) = 9.3e-37
Identities = 30/140 (21%), Positives = 60/140 (42%)
Query: 371 GSERTSKTIIFVETKRKA-DDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
G + +T++F T A + + RS + AV G+ + R+ + IL
Sbjct: 582 GKHKYRQTVMFTATMPPAVERLARSYLRR--PAVVYIGSAGKPHE-------RVEQKVIL 632
Query: 430 VSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQ 489
+S+ K ++ + + + F I V+Q K+ + L + ++ H K Q
Sbjct: 633 MSEGEKRKKLLEVLASGFE-PPIIIFVNQ-KKGCDVLAKSLEKMGYNACTL---HGGKGQ 687
Query: 490 QERDRVLNEFRIGRASILVS 509
++R+ L+ + G ILV+
Sbjct: 688 EQREFALSNLKAGAKDILVA 707
Score = 46 (21.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K Q++R+ L+ + G ILV+
Sbjct: 682 HGGKGQEQREFALSNLKAGAKDILVA 707
Score = 46 (21.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K Q++R+ L+ + G ILV+
Sbjct: 682 HGGKGQEQREFALSNLKAGAKDILVA 707
Score = 46 (21.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K Q++R+ L+ + G ILV+
Sbjct: 682 HGGKGQEQREFALSNLKAGAKDILVA 707
Score = 46 (21.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K Q++R+ L+ + G ILV+
Sbjct: 682 HGGKGQEQREFALSNLKAGAKDILVA 707
Score = 46 (21.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K Q++R+ L+ + G ILV+
Sbjct: 682 HGGKGQEQREFALSNLKAGAKDILVA 707
Score = 46 (21.3 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K Q++R+ L+ + G ILV+
Sbjct: 682 HGGKGQEQREFALSNLKAGAKDILVA 707
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 502 (181.8 bits), Expect = 7.2e-48, P = 7.2e-48
Identities = 111/303 (36%), Positives = 171/303 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E P+I+K + G+ PT +QA P AL DL+A A+TG+GKT ++ PA+
Sbjct: 3 FAELKLAPHILKAVAACGYTEPTPVQAAAVPRALENVDLLATAQTGTGKTAAFVLPALQR 62
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
++S P G GP VLVL PTRELAQQ+ +G+ R + GG P Q++ L
Sbjct: 63 LSSP-PQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMPYHAQLRLLS 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
+ ++ATPGRL+D L++ +++L R LVLDEADRMLDMGF + +I RQ
Sbjct: 122 APVDFIVATPGRLVDLLDRRSLDLSRLELLVLDEADRMLDMGFSDDVDRIAAASPATRQT 181
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQE-HEKDYKLQGLLS 368
L+++AT + +LA L + +++I T H I Q + V + H K+ L+ L++
Sbjct: 182 LLFTATMDSAMARLAGRLLREPERIDIAGTKTTHEH-IEQRLHVADDLHHKNRLLRHLIT 240
Query: 369 QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
E + IIF TKR A+++ ++ +G +A A+HG+ Q R+R + + GR +
Sbjct: 241 D---ESLRRAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRL 297
Query: 429 LVS 431
LV+
Sbjct: 298 LVA 300
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 486 (176.1 bits), Expect = 8.5e-48, Sum P(2) = 8.5e-48
Identities = 116/314 (36%), Positives = 171/314 (54%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ VPRPI FE C FP + + G++ PT IQ Q P+ L G D+VA A TGSGKT
Sbjct: 201 GQQVPRPIIEFEHCGFPETLNSNLKNSGYEVPTPIQMQMIPVGLLGRDIVASADTGSGKT 260
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGG 238
++ P I+ V L E P L+LAPTRELA QIE A + + R + GG
Sbjct: 261 AAFLLPVIMKV-----LNETETPSALILAPTRELAIQIERQAKELMAGLPNMRTVLLVGG 315
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ+ L+ +++IATPGRL++ L Q ++ LH +V+DE D ML MGF+ Q+
Sbjct: 316 LPLPPQLHRLKQSVKVIIATPGRLLEILRQSSVQLHGIKIVVVDEVDTMLKMGFQQQVLD 375
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHE 358
I+ I D Q ++ SAT P ++ LA L ++V++ IG N + N+ QI+ +E
Sbjct: 376 ILEDISHDHQTILVSATIPVGIEHLANQLLHNFVRITIGEKNLPCS-NVRQIILWVEEPS 434
Query: 359 KDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDRV 417
K KL +L+ + ++FV+ K AD ++ +V G ++H KSQ ER +
Sbjct: 435 KKKKLFEILNDKKLFKPP-VLVFVDCKLGADLLSDAVHKITGLQCTSMHSEKSQVERTAI 493
Query: 418 LNEFRIGRASILVS 431
L + ++VS
Sbjct: 494 LQGLLQEKYEVIVS 507
Score = 37 (18.1 bits), Expect = 8.5e-48, Sum P(2) = 8.5e-48
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H KSQ ER +L + ++VS
Sbjct: 482 HSEKSQVERTAILQGLLQEKYEVIVS 507
Score = 37 (18.1 bits), Expect = 8.5e-48, Sum P(2) = 8.5e-48
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H KSQ ER +L + ++VS
Sbjct: 482 HSEKSQVERTAILQGLLQEKYEVIVS 507
Score = 37 (18.1 bits), Expect = 8.5e-48, Sum P(2) = 8.5e-48
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H KSQ ER +L + ++VS
Sbjct: 482 HSEKSQVERTAILQGLLQEKYEVIVS 507
Score = 37 (18.1 bits), Expect = 8.5e-48, Sum P(2) = 8.5e-48
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H KSQ ER +L + ++VS
Sbjct: 482 HSEKSQVERTAILQGLLQEKYEVIVS 507
Score = 37 (18.1 bits), Expect = 8.5e-48, Sum P(2) = 8.5e-48
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H KSQ ER +L + ++VS
Sbjct: 482 HSEKSQVERTAILQGLLQEKYEVIVS 507
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 511 (184.9 bits), Expect = 1.9e-47, P = 1.9e-47
Identities = 118/321 (36%), Positives = 182/321 (56%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP I FEE N + K + + G+ T IQ PI ++G DL+A A+TGSGKT
Sbjct: 278 GSDVPPAILTFEEANLCDSLAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKT 337
Query: 180 LGYIAPAIVHVN----SQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACV 235
++ P + H+ ++ + P +++APTREL QI A F T R +
Sbjct: 338 AAFLLPILAHLMVKGVESSAFQTLKEPEAIIVAPTRELINQIYLDARKFSYGTCVRPVVI 397
Query: 236 FGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQ 295
+GG +K + G I+ ATPGRL+D + + I L + YLVLDEADRMLDMGF
Sbjct: 398 YGGTQMFHSLKQISEGCNILCATPGRLLDVIRKEKIGLTKLRYLVLDEADRMLDMGFRED 457
Query: 296 IRKII---GQ-IRPDRQVLMWSATWPKEVQKLAEDFLV-DYVQLNIGSLNPTANHNIVQI 350
I ++ G + +RQ LM+SAT+P +Q LA + L DY+ + +G + + +
Sbjct: 458 IENLLKSSGMPSKEERQTLMFSATFPSSIQSLAREILKPDYLFVVVGQVGGACSDVEQMV 517
Query: 351 VDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKS 410
++V + +KD KL +L +IGSERT ++FV+TK+KAD I + + + +IHG++
Sbjct: 518 IEVDEFGKKD-KLMEILQEIGSERT---MVFVKTKKKADFIATFLCQEKVPSTSIHGDRE 573
Query: 411 QQERDRVLNEFRIGRASILVS 431
Q+ER+ L +FR G+ ++V+
Sbjct: 574 QKERETALRDFRTGQCPVIVA 594
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 478 (173.3 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 117/315 (37%), Positives = 173/315 (54%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G V RP+ F+ C FP + + + G++APT +Q Q P+ L+G D++A A TGSGKT
Sbjct: 162 GTEVCRPVIEFQHCRFPTVLERNLKAAGYEAPTPVQMQMVPVGLTGRDVIATADTGSGKT 221
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGG 238
+ ++ P ++ Q S P L+L PTRELA QIE A + R A + GG
Sbjct: 222 VAFLLPVVMRA-LQSESASPSCPACLILTPTRELAIQIEEQAKELMRGLPNMRTALLVGG 280
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ+ L+ +IVI TPGRL++ L+Q + L +V+DEAD ML MGF+ Q+
Sbjct: 281 MPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVLD 340
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLN-PTANHNIVQIVDVCQEH 357
I+ Q+ D Q L+ SAT P Q+LAE D V + IG N P AN + QIV +E
Sbjct: 341 ILEQVPEDHQTLLTSATIPTGTQQLAERLTHDPVTITIGQKNQPCAN--VRQIVLWVEEP 398
Query: 358 EKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDR 416
K KL +L+ + ++FV+ K AD + +V+ VAIH +K Q ER++
Sbjct: 399 SKKKKLFEILNDEKLYQPP-VVVFVDCKLGADLLCEAVQKVMSLNTVAIHSDKMQWERNK 457
Query: 417 VLNEFRIGRASILVS 431
++ G+ +++S
Sbjct: 458 IVKGLLEGQFDVVIS 472
Score = 40 (19.1 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H +K Q ER++++ G+ +++S
Sbjct: 447 HSDKMQWERNKIVKGLLEGQFDVVIS 472
Score = 40 (19.1 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H +K Q ER++++ G+ +++S
Sbjct: 447 HSDKMQWERNKIVKGLLEGQFDVVIS 472
Score = 40 (19.1 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +K Q ER++++ G+ +++S
Sbjct: 447 HSDKMQWERNKIVKGLLEGQFDVVIS 472
Score = 40 (19.1 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +K Q ER++++ G+ +++S
Sbjct: 447 HSDKMQWERNKIVKGLLEGQFDVVIS 472
Score = 40 (19.1 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +K Q ER++++ G+ +++S
Sbjct: 447 HSDKMQWERNKIVKGLLEGQFDVVIS 472
Score = 40 (19.1 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +K Q ER++++ G+ +++S
Sbjct: 447 HSDKMQWERNKIVKGLLEGQFDVVIS 472
Score = 40 (19.1 bits), Expect = 3.8e-47, Sum P(2) = 3.8e-47
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +K Q ER++++ G+ +++S
Sbjct: 447 HSDKMQWERNKIVKGLLEGQFDVVIS 472
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 377 (137.8 bits), Expect = 4.8e-47, Sum P(2) = 4.8e-47
Identities = 78/187 (41%), Positives = 112/187 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G +P P++++EE P ++K + ++ ++ P++IQ P+ L DL+ IA+TGSGKT
Sbjct: 241 GDDLPNPLRNWEEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKT 300
Query: 180 LGYIAPAIVHVNSQRPLRSGE---GPIVLVLAPTRELAQQIETVANDFGSATATRVACVF 236
+I P I+ ++ PL GP +VLAPTRELAQQI+ N F R V
Sbjct: 301 AAFIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVV 360
Query: 237 GGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQI 296
GG Q + GA IV+ATPGRL+D LE+ L + +Y+V+DEADRMLDMGFE +
Sbjct: 361 GGHAFEEQSFQMSQGAHIVVATPGRLLDCLERRLFVLSQCTYVVMDEADRMLDMGFEDDV 420
Query: 297 RKIIGQI 303
KI+ +
Sbjct: 421 NKILSSL 427
Score = 189 (71.6 bits), Expect = 4.8e-47, Sum P(2) = 4.8e-47
Identities = 45/127 (35%), Positives = 74/127 (58%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK-LQG 365
RQ +M+SAT P V LA+ +L++ V L IG++ + + Q V++ + K ++ ++
Sbjct: 450 RQTIMFSATLPPRVANLAKSYLIEPVMLTIGNIGQAVDR-VEQRVEMISDDSKKWRRVEE 508
Query: 366 LLSQIGSERTSKTII-FVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
+L S R S II FV KR + I + + GW AV +HG+KSQ++R+R + + R
Sbjct: 509 ILE---SNRFSPPIIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNK 565
Query: 425 RASILVS 431
A ILV+
Sbjct: 566 TADILVA 572
Score = 71 (30.1 bits), Expect = 1.2e-34, Sum P(2) = 1.2e-34
Identities = 40/153 (26%), Positives = 71/153 (46%)
Query: 358 EKDYKLQGLLSQIGSERTSKTIIFVET-KRKADDITRSVRNKGWAAVAIHGNKSQQERDR 416
EKD + + S R +TI+F T + ++ +S + + I GN Q DR
Sbjct: 434 EKDGSILATANSSSSRR--QTIMFSATLPPRVANLAKSYLIEP-VMLTI-GNIGQAV-DR 488
Query: 417 VLNEFRIGRASILVSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIG 476
V E R+ ++S +K + + +L R I+ K + + + LN IG
Sbjct: 489 V--EQRVE----MISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNA--IG 540
Query: 477 RASILVSHYNKSQQERDRVLNEFRIGRASILVS 509
++ + H +KSQ++R+R + + R A ILV+
Sbjct: 541 WHAVTL-HGSKSQEQRERAIEQLRNKTADILVA 572
Score = 67 (28.6 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 500 RIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASIL 559
R+ + ++S +K + + +L R I+ + ++ + + LN IG ++
Sbjct: 488 RVEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNA--IGWHAVT 545
Query: 560 VSHYNKSQQERDRVLNEFRIGRASILVS 587
+ H +KSQ++R+R + + R A ILV+
Sbjct: 546 L-HGSKSQEQRERAIEQLRNKTADILVA 572
Score = 67 (28.6 bits), Expect = 3.1e-34, Sum P(2) = 3.1e-34
Identities = 21/88 (23%), Positives = 45/88 (51%)
Query: 578 RIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASIL 637
R+ + ++S +K + + +L R I+ + ++ + + LN IG ++
Sbjct: 488 RVEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEAIAKQLNA--IGWHAVT 545
Query: 638 VSHYNKSQQERDRVLNEFRIGRASILVS 665
+ H +KSQ++R+R + + R A ILV+
Sbjct: 546 L-HGSKSQEQRERAIEQLRNKTADILVA 572
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 494 (179.0 bits), Expect = 6.2e-47, P = 6.2e-47
Identities = 110/293 (37%), Positives = 169/293 (57%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+ K + E G+ P+ IQAQ P L+G D++A A+TG+GKT G+ P + + +S
Sbjct: 12 LQKAVSEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLELLAKGHKAKS 71
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
G+ LVL PTRELA Q+ +G R A VFGG P PQ+ L+ G ++++AT
Sbjct: 72 GQTR-ALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPINPQINKLRHGVDVLVAT 130
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRL+D ++Q + ++ LVLDEADRMLDMGF I+KI+ + RQ LM+SAT+
Sbjct: 131 PGRLLDLVQQNAVKFNQLEILVLDEADRMLDMGFIRDIKKILALLPAKRQNLMFSATFSD 190
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
E+++LA+ + V++++ N A + Q + C +K K L+ I E +
Sbjct: 191 EIRELAKGLVNHPVEISVTPRNAAAT-TVKQWI--CPV-DKTQKSALLIQLIKQENWQQV 246
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++F TK A+ + +S+ +A AIHGNKSQ R + L +F+ G +LV+
Sbjct: 247 LVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVA 299
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 469 (170.2 bits), Expect = 6.3e-47, Sum P(2) = 6.3e-47
Identities = 125/338 (36%), Positives = 182/338 (53%)
Query: 106 VKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSG 165
V+ +Y++L +E G+ +P PI+ F E FP I+K + + G PT IQ QG P LSG
Sbjct: 19 VRKKYHIL-VE---GEGIPAPIKSFREMKFPQAILKGLKKKGIVHPTPIQIQGIPTILSG 74
Query: 166 CDLVAIAKTGSGKTLGYIAPAIVHVNSQR---PLRSGEGPIVLVLAPTRELAQQ-----I 217
D++ IA TGSGKTL + P I+ Q P EGP L++ P+ +A+ I
Sbjct: 75 RDMIGIAFTGSGKTLVFTLPIIMFCLEQEKRLPFCKREGPYGLIICPSVNVAKHTHHGII 134
Query: 218 E---TVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLH 274
E + D G A R A GG Q++ ++ +ATPGRL+D L + ++L
Sbjct: 135 EYYCKLLEDEG-APQMRCALCIGGMSVKEQMEVVK------LATPGRLMDLLNKKMVSLD 187
Query: 275 RTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQL 334
YL LDEADRM+DMGFE IR I + RQ L++SAT PK++Q A+ LV + +
Sbjct: 188 ICRYLALDEADRMIDMGFEEDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPITI 247
Query: 335 NIGSLNPTANHNIVQIVDVCQEHEKD-YKLQGLLSQIGSERTSKTIIFVETKRKADDITR 393
N+G A+ +++Q V+ +E K Y L+ L + +IF E K D I
Sbjct: 248 NVGRAG-AASLDVIQEVEYVKEEAKMVYLLECL-----QKTPPPVLIFAEKKADVDAIHE 301
Query: 394 SVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ KG AVAIHG K Q+ER + + F+ G+ +LV+
Sbjct: 302 YLLLKGVEAVAIHGGKDQEERTKAIEAFKEGKKDVLVA 339
Score = 48 (22.0 bits), Expect = 6.3e-47, Sum P(2) = 6.3e-47
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K Q+ER + + F+ G+ +LV+
Sbjct: 317 KDQEERTKAIEAFKEGKKDVLVA 339
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 469 (170.2 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 117/314 (37%), Positives = 173/314 (55%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ VPRPI FE C FP + + + G++ PT IQ Q P+ L G D++A A TGSGKT
Sbjct: 196 GRGVPRPIVDFEHCGFPEALNRNLKASGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKT 255
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGG 238
++ P I+ SQ SG LVL PTRELA QIE A + S R A + GG
Sbjct: 256 AAFLLPVILRALSQSKSPSG-----LVLTPTRELAIQIERQAKELMSGLPCLRTALLVGG 310
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ L+ +++IATPGRL+D ++Q ++ L +V+DEAD ML MGF+ Q+
Sbjct: 311 LPAPPQRHRLRQRIQVIIATPGRLLDIIKQRSVELGSIKIVVVDEADTMLKMGFQQQVLD 370
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHE 358
++ Q+ D Q ++ SAT P V++LA L D V + G N ++ QIV +E
Sbjct: 371 VLEQLPHDCQTVLASATIPASVEQLACQLLRDPVAITAGERNLPCP-SVRQIVLWVEEPA 429
Query: 359 KDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDRV 417
K KL +L+ + ++FV+ K AD ++ +V+ G + ++H +K+Q ER +
Sbjct: 430 KKKKLFEILNDKKLFKPP-VLVFVDCKLGADLLSEAVQKITGLKSTSVHSDKTQMERKNI 488
Query: 418 LNEFRIGRASILVS 431
L G ++VS
Sbjct: 489 LKGLLEGDYDVVVS 502
Score = 41 (19.5 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H +K+Q ER +L G ++VS
Sbjct: 477 HSDKTQMERKNILKGLLEGDYDVVVS 502
Score = 41 (19.5 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H +K+Q ER +L G ++VS
Sbjct: 477 HSDKTQMERKNILKGLLEGDYDVVVS 502
Score = 41 (19.5 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H +K+Q ER +L G ++VS
Sbjct: 477 HSDKTQMERKNILKGLLEGDYDVVVS 502
Score = 41 (19.5 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H +K+Q ER +L G ++VS
Sbjct: 477 HSDKTQMERKNILKGLLEGDYDVVVS 502
Score = 41 (19.5 bits), Expect = 3.4e-46, Sum P(2) = 3.4e-46
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H +K+Q ER +L G ++VS
Sbjct: 477 HSDKTQMERKNILKGLLEGDYDVVVS 502
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 462 (167.7 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 110/306 (35%), Positives = 169/306 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F P I+ + G++ P+AIQ Q PI L+G D++ A+TG+GKT + P +
Sbjct: 8 FAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILHR 67
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQVKAL 248
++ P S P L+LAPTRELA Q+ T + V V+GGAP GPQ+KA+
Sbjct: 68 ID---P--SKREPQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQLKAI 122
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ GA+IV+ATPGRL D+L + L ++LVLDEAD ML +GF + I + RQ
Sbjct: 123 RNGAQIVVATPGRLCDHLRRDEKVLATVNHLVLDEADEMLKLGFMDDLEVIFKAMPETRQ 182
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEH---EKDYKLQG 365
+++SAT P+ ++ +AE L D + I S T + + Q H D K
Sbjct: 183 TVLFSATLPQSIRAIAERHLKDPKHVKIQSKTQT-------VTAIEQAHLLVHADQKTSA 235
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
+LS + E I+FV TK+ D+ ++ KG+ A A++G+ +Q +R+RV++ + GR
Sbjct: 236 VLSLLEVEDFDALIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGR 295
Query: 426 ASILVS 431
I+V+
Sbjct: 296 LDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 436 SQQERDRVLNEFRIGRASILVS 457
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 488 SQQERDRVLNEFRIGRASILVS 509
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 514 SQQERDRVLNEFRIGRASILVS 535
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 540 SQQERDRVLNEFRIGRASILVS 561
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 566 SQQERDRVLNEFRIGRASILVS 587
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 592 SQQERDRVLNEFRIGRASILVS 613
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 618 SQQERDRVLNEFRIGRASILVS 639
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 46 (21.3 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 644 SQQERDRVLNEFRIGRASILVS 665
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
Score = 45 (20.9 bits), Expect = 8.4e-46, Sum P(2) = 8.4e-46
Identities = 8/22 (36%), Positives = 16/22 (72%)
Query: 462 SQQKRDRVLNEFRIGRASILVS 483
+Q +R+RV++ + GR I+V+
Sbjct: 280 AQNQRERVIDSLKDGRLDIVVA 301
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 403 (146.9 bits), Expect = 7.8e-46, Sum P(2) = 7.8e-46
Identities = 84/185 (45%), Positives = 116/185 (62%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G +P PI+ + E FP I+ I ++G++ PT IQ Q PI L D++ +A+TGSGKT
Sbjct: 386 GGRIPNPIRSWNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKT 445
Query: 180 LGYIAPAIVHVNS----QRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACV 235
L ++ P + + S +R +GP +++APTRELAQQIE FG R V
Sbjct: 446 LAFLIPLLSWIQSLPKIERLEDVDQGPYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVV 505
Query: 236 FGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQ 295
GG + Q L+ G EIVIATPGRLID LE + L++ +Y+VLDEADRM+DMGFEP
Sbjct: 506 VGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPD 565
Query: 296 IRKII 300
++KI+
Sbjct: 566 VQKIL 570
Score = 155 (59.6 bits), Expect = 7.8e-46, Sum P(2) = 7.8e-46
Identities = 42/126 (33%), Positives = 68/126 (53%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLN-PTANHNIVQIVDVCQEHEKDYKLQG 365
RQ +M++AT P V++LA +L + IGS+ PT QIV + E++K KL
Sbjct: 602 RQTVMFTATMPPAVERLARTYLRRPATVYIGSVGKPTERTE--QIVYMMGENDKRKKLME 659
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
+LS+ + IIFV K+ AD + + + G+ + +HG K Q++R+ L + G
Sbjct: 660 ILSR---KIDPPVIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGA 716
Query: 426 ASILVS 431
ILV+
Sbjct: 717 KDILVA 722
Score = 42 (19.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H K Q++R+ L + G ILV+
Sbjct: 697 HGGKGQEQREYALAALKSGAKDILVA 722
Score = 42 (19.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K Q++R+ L + G ILV+
Sbjct: 697 HGGKGQEQREYALAALKSGAKDILVA 722
Score = 42 (19.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K Q++R+ L + G ILV+
Sbjct: 697 HGGKGQEQREYALAALKSGAKDILVA 722
Score = 42 (19.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K Q++R+ L + G ILV+
Sbjct: 697 HGGKGQEQREYALAALKSGAKDILVA 722
Score = 42 (19.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K Q++R+ L + G ILV+
Sbjct: 697 HGGKGQEQREYALAALKSGAKDILVA 722
Score = 42 (19.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K Q++R+ L + G ILV+
Sbjct: 697 HGGKGQEQREYALAALKSGAKDILVA 722
Score = 42 (19.8 bits), Expect = 5.7e-34, Sum P(2) = 5.7e-34
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K Q++R+ L + G ILV+
Sbjct: 697 HGGKGQEQREYALAALKSGAKDILVA 722
>UNIPROTKB|Q8EDC4 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 464 (168.4 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 116/306 (37%), Positives = 177/306 (57%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + + +++ + MG PTAIQ Q PIAL+G DL+A +KTGSGKTL ++ PA+
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V S R L S P VL+L PTRELA Q+ + + T + V GG Q KAL
Sbjct: 63 VISTRAL-SKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALA 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI-RPDRQ 308
++ATPGR+ D+LEQ + L+ L+LDEADRMLD+GF PQ++ I RQ
Sbjct: 122 KEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADHKRRQ 181
Query: 309 VLMWSATWP-KEVQKLAEDFLVDYVQLNIGSLNPTANH-NIVQIVDVCQEHEKDYKLQGL 366
LM+SAT E+ ++A L + + + IG+ + A H +I Q + +C +H D+K + L
Sbjct: 182 TLMFSATLDHSEINEIAAALLKNPLHVAIGTAH--AEHQDISQRIYLC-DH-LDHK-EAL 236
Query: 367 LSQIGSERTSK-TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
LS++ S+ + K IIF T+ + + + +G+A A+ G Q R++++++F G+
Sbjct: 237 LSRLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQ 296
Query: 426 ASILVS 431
ILV+
Sbjct: 297 QQILVT 302
Score = 39 (18.8 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 437 QQERDRVLNEFRIGRASILVS 457
Q R++++++F G+ ILV+
Sbjct: 282 QAARNQIMDQFARGQQQILVT 302
Score = 39 (18.8 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R++++++F G+ ILV+
Sbjct: 282 QAARNQIMDQFARGQQQILVT 302
Score = 39 (18.8 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 489 QQERDRVLNEFRIGRASILVS 509
Q R++++++F G+ ILV+
Sbjct: 282 QAARNQIMDQFARGQQQILVT 302
>TIGR_CMR|SO_2838 [details] [associations]
symbol:SO_2838 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK869483 RefSeq:NP_718410.1 ProteinModelPortal:Q8EDC4
GeneID:1170534 KEGG:son:SO_2838 PATRIC:23525314 OMA:LAGHDIF
Uniprot:Q8EDC4
Length = 449
Score = 464 (168.4 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 116/306 (37%), Positives = 177/306 (57%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + + +++ + MG PTAIQ Q PIAL+G DL+A +KTGSGKTL ++ PA+
Sbjct: 3 FTDFSLDQRLLQSLKHMGIATPTAIQEQALPIALAGKDLMASSKTGSGKTLAFLLPALQR 62
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V S R L S P VL+L PTRELA Q+ + + T + V GG Q KAL
Sbjct: 63 VISTRAL-SKRDPRVLILLPTRELAHQVYSQLRLLVANTQYKAISVLGGENFNDQAKALA 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI-RPDRQ 308
++ATPGR+ D+LEQ + L+ L+LDEADRMLD+GF PQ++ I RQ
Sbjct: 122 KEPHFIVATPGRIADHLEQKNLFLNGLELLILDEADRMLDLGFAPQLKAINEAADHKRRQ 181
Query: 309 VLMWSATWP-KEVQKLAEDFLVDYVQLNIGSLNPTANH-NIVQIVDVCQEHEKDYKLQGL 366
LM+SAT E+ ++A L + + + IG+ + A H +I Q + +C +H D+K + L
Sbjct: 182 TLMFSATLDHSEINEIAAALLKNPLHVAIGTAH--AEHQDISQRIYLC-DH-LDHK-EAL 236
Query: 367 LSQIGSERTSK-TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
LS++ S+ + K IIF T+ + + + +G+A A+ G Q R++++++F G+
Sbjct: 237 LSRLLSDESHKQVIIFTATRADTERLAAKLSAQGFATAALSGELKQAARNQIMDQFARGQ 296
Query: 426 ASILVS 431
ILV+
Sbjct: 297 QQILVT 302
Score = 39 (18.8 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 437 QQERDRVLNEFRIGRASILVS 457
Q R++++++F G+ ILV+
Sbjct: 282 QAARNQIMDQFARGQQQILVT 302
Score = 39 (18.8 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R++++++F G+ ILV+
Sbjct: 282 QAARNQIMDQFARGQQQILVT 302
Score = 39 (18.8 bits), Expect = 2.1e-45, Sum P(2) = 2.1e-45
Identities = 7/21 (33%), Positives = 15/21 (71%)
Query: 489 QQERDRVLNEFRIGRASILVS 509
Q R++++++F G+ ILV+
Sbjct: 282 QAARNQIMDQFARGQQQILVT 302
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 463 (168.0 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 115/314 (36%), Positives = 170/314 (54%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ VPRPI F C FP + + G++ PT IQ Q P+ L G DL+A A TGSGKT
Sbjct: 183 GRGVPRPIIDFGHCGFPETLNFNLKTAGYEVPTPIQMQMIPVGLLGRDLLASADTGSGKT 242
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDF-GSATATRVACVFGG 238
++ P I R L + P LVL PTRELA QIE A + G R A + GG
Sbjct: 243 AAFLLPVIT-----RALVQSKAPSALVLTPTRELAIQIERQAKELMGGLPRMRTALLVGG 297
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ+ L+ +++IATPGRL+D ++Q +++L +V+DEAD ML MGF+ Q+
Sbjct: 298 LPAPPQLHRLRQRVQVIIATPGRLLDIMKQSSVDLGNIKIVVVDEADTMLKMGFQEQVLD 357
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHE 358
++ + D Q ++ SAT P +++LA L D V++ G N ++ QIV +E
Sbjct: 358 VLENVPQDCQTILVSATIPTRIEQLASRLLHDPVRVLAGEKNLPCP-SVRQIVLWVEEPA 416
Query: 359 KDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDRV 417
K KL +L+ + ++FV+ K AD ++ +V G + ++H KSQ ER +
Sbjct: 417 KKKKLFEILNDKKLFKPP-VLVFVDCKLGADLLSEAVEKITGLKSTSMHSEKSQIERKTI 475
Query: 418 LNEFRIGRASILVS 431
L G ++VS
Sbjct: 476 LEGLLEGDYDVVVS 489
Score = 39 (18.8 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H KSQ ER +L G ++VS
Sbjct: 464 HSEKSQIERKTILEGLLEGDYDVVVS 489
Score = 39 (18.8 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H KSQ ER +L G ++VS
Sbjct: 464 HSEKSQIERKTILEGLLEGDYDVVVS 489
Score = 39 (18.8 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H KSQ ER +L G ++VS
Sbjct: 464 HSEKSQIERKTILEGLLEGDYDVVVS 489
Score = 39 (18.8 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H KSQ ER +L G ++VS
Sbjct: 464 HSEKSQIERKTILEGLLEGDYDVVVS 489
Score = 39 (18.8 bits), Expect = 2.8e-45, Sum P(2) = 2.8e-45
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H KSQ ER +L G ++VS
Sbjct: 464 HSEKSQIERKTILEGLLEGDYDVVVS 489
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 445 (161.7 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 108/300 (36%), Positives = 173/300 (57%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQ----- 193
I+ I ++G+ PTAIQ + P+ L+G D++A A+TG+GKT ++ P + +NSQ
Sbjct: 12 ILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQLNSQYKETG 71
Query: 194 RPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAE 253
+ LR+ + L+L PTRELA Q+E + + ++GG Q + L G +
Sbjct: 72 KKLRA-KRIRALILVPTRELAVQVEASISQYAKYLDISSMAMYGGVDAQEQKQRLIWGVD 130
Query: 254 IVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWS 313
I++ATPGRL+D Q ++ LVLDEADRMLDMGF I KII ++ RQ L++S
Sbjct: 131 ILVATPGRLLDMTHQRVLHFDELDMLVLDEADRMLDMGFIDDINKIIERLPEHRQNLLFS 190
Query: 314 ATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ-IVDVCQEHEKDYKLQGLLSQI-G 371
AT +EV+ LA+ + V+++IG+ + + I Q +V V +K K LLS I
Sbjct: 191 ATMSEEVRGLAKRTIHKPVEISIGA-DKASKPKIEQWLVTV----DKANK-SALLSHIIT 244
Query: 372 SERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++ + +IF+ETK A + + +G A +IH ++Q R+++LN+F+ G+ LV+
Sbjct: 245 TQNWQQALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIKFLVA 304
Score = 57 (25.1 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H ++Q R+++LN+F+ G+ LV+
Sbjct: 279 HSGRAQDIREKILNDFKSGKIKFLVA 304
Score = 57 (25.1 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H ++Q R+++LN+F+ G+ LV+
Sbjct: 279 HSGRAQDIREKILNDFKSGKIKFLVA 304
Score = 57 (25.1 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H ++Q R+++LN+F+ G+ LV+
Sbjct: 279 HSGRAQDIREKILNDFKSGKIKFLVA 304
Score = 57 (25.1 bits), Expect = 4.2e-45, Sum P(2) = 4.2e-45
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H ++Q R+++LN+F+ G+ LV+
Sbjct: 279 HSGRAQDIREKILNDFKSGKIKFLVA 304
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 490 (177.5 bits), Expect = 6.2e-45, P = 6.2e-45
Identities = 112/320 (35%), Positives = 187/320 (58%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
GK VP I FEE N + + + G+ T +Q PI ++G DL+A A+TGSGKT
Sbjct: 266 GKDVPPAILTFEEANLCETLRRNVARAGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKT 325
Query: 180 LGYIAPAIVHVNSQRPLRSG----EGPIVLVLAPTRELAQQIETVANDFGSATATRVACV 235
++ P + ++ ++ S + P +++APTREL QI A F T R V
Sbjct: 326 AAFLLPILSYMMNEGITASQYLQLQEPEAIIIAPTRELINQIYLDARKFSYGTCVRPVVV 385
Query: 236 FGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQ 295
+GG ++ ++ G I+ ATPGRL+D + + I L + YLVLDEADRMLDMGF P+
Sbjct: 386 YGGIQPVHAMRDVEKGCNILCATPGRLLDIVSKEKIGLSKLRYLVLDEADRMLDMGFAPE 445
Query: 296 IRKIIGQ----IRPDRQVLMWSATWPKEVQKLAEDFLV-DYVQLNIGSLNPTANHNIVQI 350
I K++ + + RQ LM+SAT+P+E+++LA ++L +++ + +G + + ++ Q
Sbjct: 446 IEKLMTKPGMPTKEKRQTLMFSATYPEEIRRLASNYLKSEHLFVVVGLVGGACS-DVAQT 504
Query: 351 VDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKS 410
V E ++ K++ LL + S +T+IFV TK+KAD I + + +++ +IHG++
Sbjct: 505 V---LEMRENGKMEKLLEILKSSEKERTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDRE 561
Query: 411 QQERDRVLNEFRIGRASILV 430
Q +R+ L +FR G+ +++V
Sbjct: 562 QYQRESALWDFRTGKCTVIV 581
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 490 (177.5 bits), Expect = 6.9e-45, P = 6.9e-45
Identities = 122/348 (35%), Positives = 188/348 (54%)
Query: 96 ESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQ 155
E+ H+ + Y L G P I FEE + + I + G+ T +Q
Sbjct: 234 EATFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEETDLCQTLNNDITKAGYTKLTPVQ 293
Query: 156 AQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH-----VNSQRPLRSGEGPIVLVLAPT 210
G PI L+G DL+A A+TGSGKT ++ P + H V + R + + P +++APT
Sbjct: 294 KYGIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGVTASR-FKDQQEPECIIVAPT 352
Query: 211 RELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGT 270
REL QI A F T R ++GG G ++ + G I+ ATPGRL+D + +
Sbjct: 353 RELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMDIIGKEK 412
Query: 271 INLHRTSYLVLDEADRMLDMGFEPQIRKIIG----QIRPDRQVLMWSATWPK-EVQKLAE 325
I L + YLVLDEADRMLDMGF P+++K+I + RQ LM+SAT+P+ + A
Sbjct: 413 IGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPRGNFKDWAG 472
Query: 326 DFLVDYV--QLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVE 383
+FL + + +G + + ++ Q V ++ K KL +L IG ERT ++FVE
Sbjct: 473 EFLKNLTICLVAVGQVGGACS-DVQQTVLQVGQYSKREKLVEILRNIGEERT---MVFVE 528
Query: 384 TKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
TK+KAD I + + + +IHG++ Q+ER++ L +FR G+ +LV+
Sbjct: 529 TKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVA 576
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 427 (155.4 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 102/303 (33%), Positives = 165/303 (54%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
FE N P ++K IY GF+ P+AIQ++ +SG D +A A++G+GKT + +
Sbjct: 28 FESMNLKPDLLKGIYAYGFETPSAIQSRAIMQIISGRDTIAQAQSGTGKTATFSIGMLEV 87
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRV-ACVFGGAPKGPQVKAL 248
+++ +S E L+L+PTRELA QI+ V G AC+ GG G VK L
Sbjct: 88 IDT----KSKECQ-ALILSPTRELAIQIQNVVKHLGDYMNIHTHACI-GGKNVGEDVKKL 141
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
Q G +IV TPGR+ID +++ + L+LDEAD + GF+ QI +I + P Q
Sbjct: 142 QQGQQIVSGTPGRVIDVIKRRNLQTRNIKVLILDEADELFTKGFKEQIYEIYKHLPPSVQ 201
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS 368
V++ SAT P+EV ++ F D V++ + + + I Q C+ +D+K L
Sbjct: 202 VVVVSATLPREVLEMTSKFTTDPVKILV-KRDEISLSGIKQYYVQCER--EDWKFDTLCD 258
Query: 369 QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
+ ++ +IF TK K + + ++ + + VA+HG+ Q ERD ++N+FR G + +
Sbjct: 259 LYDNLTITQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRV 318
Query: 429 LVS 431
L+S
Sbjct: 319 LIS 321
Score = 70 (29.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 479 SILVSHYNKSQQERDRVLNEFRIGRASILVS 509
+++ H + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 70 (29.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 505 SILVSHYNKSQQERDRVLNEFRIGRASILVS 535
+++ H + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 70 (29.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 531 SILVSHYNKSQQERDRVLNEFRIGRASILVS 561
+++ H + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 70 (29.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVS 587
+++ H + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 70 (29.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 583 SILVSHYNKSQQERDRVLNEFRIGRASILVS 613
+++ H + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 70 (29.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 609 SILVSHYNKSQQERDRVLNEFRIGRASILVS 639
+++ H + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 70 (29.7 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/31 (35%), Positives = 21/31 (67%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVS 665
+++ H + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 62 (26.9 bits), Expect = 1.4e-43, Sum P(2) = 1.4e-43
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 427 SILVSQYNKSQQERDRVLNEFRIGRASILVS 457
+++ + Q ERD ++N+FR G + +L+S
Sbjct: 291 TVVAMHGDMKQDERDSIMNDFRRGNSRVLIS 321
Score = 57 (25.1 bits), Expect = 4.6e-43, Sum P(2) = 4.6e-43
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q +RD ++N+FR G + +L+S
Sbjct: 301 QDERDSIMNDFRRGNSRVLIS 321
>UNIPROTKB|Q5L3G9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:235909 "Geobacillus kaustophilus HTA426" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR HSSP:Q58083 EMBL:BA000043 RefSeq:YP_146079.1
ProteinModelPortal:Q5L3G9 GeneID:3184893 GenomeReviews:BA000043_GR
KEGG:gka:GK0226 PATRIC:21961545 ProtClustDB:CLSK712472
BioCyc:GKAU235909:GJO7-260-MONOMER Uniprot:Q5L3G9
Length = 467
Score = 451 (163.8 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 105/302 (34%), Positives = 166/302 (54%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F+E +MK I MGF+ T IQA+ P++L D++ A+TG+GKT + P +
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
VN + LV+APTRELA Q+ G+ RV ++GG Q++AL+
Sbjct: 64 VNVKNSAVQA-----LVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIERQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
+++ TPGR+ID++ +GT+ L +VLDEAD ML+MGF I I+ + +RQ
Sbjct: 119 KHPHVIVGTPGRIIDHINRGTLRLEHVHTVVLDEADEMLNMGFIEDIEAILSHVPAERQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q + HEK K L
Sbjct: 179 LLFSATMPDPIRRIAERFMNEPELVKVKAKEMTVP-NIQQYY--LEVHEKK-KFDILTRL 234
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + I+F TKR+ D++ ++ +G+AA IHG+ SQ +R VL +F+ G IL
Sbjct: 235 LDIQAPELAIVFGRTKRRVDELAEALNLRGYAAEGIHGDLSQAKRLSVLRKFKEGAIEIL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 44 (20.5 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + SQ +R VL +F+ G ILV+
Sbjct: 271 HGDLSQAKRLSVLRKFKEGAIEILVA 296
Score = 44 (20.5 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + SQ +R VL +F+ G ILV+
Sbjct: 271 HGDLSQAKRLSVLRKFKEGAIEILVA 296
Score = 44 (20.5 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + SQ +R VL +F+ G ILV+
Sbjct: 271 HGDLSQAKRLSVLRKFKEGAIEILVA 296
Score = 44 (20.5 bits), Expect = 2.0e-44, Sum P(2) = 2.0e-44
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + SQ +R VL +F+ G ILV+
Sbjct: 271 HGDLSQAKRLSVLRKFKEGAIEILVA 296
>UNIPROTKB|Q9KMW4 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 471 (170.9 bits), Expect = 2.5e-44, P = 2.5e-44
Identities = 110/293 (37%), Positives = 169/293 (57%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
I+K I E G+ P+ IQ Q P L+G D++A A+TG+GKT G+ P I+ + ++ P
Sbjct: 12 ILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLP-ILELLAKGPKVR 70
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
L+L PTRELA QI+ +G + A VFGG PQ++ + GA+I++AT
Sbjct: 71 ANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVAT 130
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRL+D Q + + LVLDEADRMLDMGF I KI+ + RQ L++SAT+
Sbjct: 131 PGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFST 190
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
E+++LA+ + + V++++ N TA + Q + +K L L+ + G+ + +
Sbjct: 191 EIRELAKGLVNNPVEISVSPANSTAR-TVEQCIYPADVKKKPDMLVKLVKE-GNWQ--QV 246
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++F+ TK A+ + + +G A AIHGNKSQ R R L +F+ G ILV+
Sbjct: 247 LVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299
>TIGR_CMR|VC_A0204 [details] [associations]
symbol:VC_A0204 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K11927 PIR:E82488
RefSeq:NP_232603.1 ProteinModelPortal:Q9KMW4 DNASU:2612352
GeneID:2612352 KEGG:vch:VCA0204 PATRIC:20084977 OMA:AISFCDA
ProtClustDB:CLSK869561 Uniprot:Q9KMW4
Length = 451
Score = 471 (170.9 bits), Expect = 2.5e-44, P = 2.5e-44
Identities = 110/293 (37%), Positives = 169/293 (57%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
I+K I E G+ P+ IQ Q P L+G D++A A+TG+GKT G+ P I+ + ++ P
Sbjct: 12 ILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLP-ILELLAKGPKVR 70
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
L+L PTRELA QI+ +G + A VFGG PQ++ + GA+I++AT
Sbjct: 71 ANQVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQRMCKGADILVAT 130
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRL+D Q + + LVLDEADRMLDMGF I KI+ + RQ L++SAT+
Sbjct: 131 PGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFST 190
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKT 378
E+++LA+ + + V++++ N TA + Q + +K L L+ + G+ + +
Sbjct: 191 EIRELAKGLVNNPVEISVSPANSTAR-TVEQCIYPADVKKKPDMLVKLVKE-GNWQ--QV 246
Query: 379 IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
++F+ TK A+ + + +G A AIHGNKSQ R R L +F+ G ILV+
Sbjct: 247 LVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVA 299
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 373 (136.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 83/236 (35%), Positives = 134/236 (56%)
Query: 71 MSMEQINKNLYTPNHLTVSRSQGEVESYLNHHDVTVKGRYYLLRLESRPGKCVPRPIQHF 130
+ ME+ + T N L S+ ++E ++ D + + + + G VP P++ +
Sbjct: 293 LEMERRRREESTRNQLDKHWSEKKLE-HMRERDWRIFKEDFNIATK---GGSVPNPMRSW 348
Query: 131 EECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHV 190
+E P +++ + +G++ PT IQ PIA+ DL+ +A TGSGKT ++ P + ++
Sbjct: 349 DESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYI 408
Query: 191 NSQRPL------RSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQ 244
++ P R +GP +VLAPTRELAQQIE A F V + GG Q
Sbjct: 409 -AELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQ 467
Query: 245 VKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKII 300
+L+ GAEI+IATPGRL+D +E+ + L + Y+++DEADRM+D+GFE + KI+
Sbjct: 468 AYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKIL 523
Score = 166 (63.5 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 39/125 (31%), Positives = 67/125 (53%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
RQ +M++AT P V+++A +L + IGS + + Q V++ +K K G
Sbjct: 555 RQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVD-TVEQRVEMIAGEDKRKKRLGE 613
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
+ G R I+FV KR D I R ++ G+++V +HG+K+Q++R+ L R G
Sbjct: 614 ILSSGDFRPP-IIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGST 672
Query: 427 SILVS 431
+LV+
Sbjct: 673 DVLVA 677
Score = 55 (24.4 bits), Expect = 5.1e-32, Sum P(2) = 5.1e-32
Identities = 24/92 (26%), Positives = 40/92 (43%)
Query: 450 GRASILVSQYKE---SQQKRDRVLNEFRIG---RASILVSHYNKSQQERDRVLNEFRIGR 503
G A V Q E + KR + L E R I+V + ++ D + E +
Sbjct: 588 GEAVDTVEQRVEMIAGEDKRKKRLGEILSSGDFRPPIIV--FVNIKRNCDAIAREIKQWG 645
Query: 504 ASILVSHYNKSQQERDRVLNEFRIGRASILVS 535
S + H +K+Q++R+ L R G +LV+
Sbjct: 646 FSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
Score = 53 (23.7 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 519 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 561
D + E + S + H +K+Q++R+ L R G +LV+
Sbjct: 635 DAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
Score = 53 (23.7 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 545 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 587
D + E + S + H +K+Q++R+ L R G +LV+
Sbjct: 635 DAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
Score = 53 (23.7 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 571 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 613
D + E + S + H +K+Q++R+ L R G +LV+
Sbjct: 635 DAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
Score = 53 (23.7 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 597 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 639
D + E + S + H +K+Q++R+ L R G +LV+
Sbjct: 635 DAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
Score = 53 (23.7 bits), Expect = 8.3e-32, Sum P(2) = 8.3e-32
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 623 DRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVS 665
D + E + S + H +K+Q++R+ L R G +LV+
Sbjct: 635 DAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
Score = 45 (20.9 bits), Expect = 5.7e-31, Sum P(2) = 5.7e-31
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 415 DRVLNEFRIGRASILVSQYNKSQQERDRVLNEFRIGRASILVS 457
D + E + S + +K+Q++R+ L R G +LV+
Sbjct: 635 DAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
Score = 39 (18.8 bits), Expect = 2.4e-30, Sum P(2) = 2.4e-30
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 441 DRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVS 483
D + E + S + ++Q++R+ L R G +LV+
Sbjct: 635 DAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVA 677
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 432 (157.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 100/308 (32%), Positives = 167/308 (54%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F E + ++ E+G+ +PT +QA P LSG D++A A TGSGKT + P
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 187 IVHVNSQRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSAT--ATRVACVFGGAPKGP 243
+ ++ + G + LVL PTRELAQQ+ + S ++ FGG
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 244 QVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI 303
Q+++L+ GA++++ATPGRL+D L + L + S VLDEADRML +GF ++ +++ +
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 304 RPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKL 363
+Q L++SAT+P+EV+ L L ++ ++ S + I Q V +K L
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST---IEQRVITVNREQKTALL 244
Query: 364 QGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRI 423
L+ Q + S+ +IFV K + + + + +G +A HG+K+Q R RVL+ F+
Sbjct: 245 AHLIKQ---HQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKN 301
Query: 424 GRASILVS 431
G S+L++
Sbjct: 302 GEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 482 VSHYNKSQQERDRVLNEFRIGRASILVS 509
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 508 VSHYNKSQQERDRVLNEFRIGRASILVS 535
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 534 VSHYNKSQQERDRVLNEFRIGRASILVS 561
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 560 VSHYNKSQQERDRVLNEFRIGRASILVS 587
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 586 VSHYNKSQQERDRVLNEFRIGRASILVS 613
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 612 VSHYNKSQQERDRVLNEFRIGRASILVS 639
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 638 VSHYNKSQQERDRVLNEFRIGRASILVS 665
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 45 (20.9 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 461 ESQQKRDRVLNEFRIGRASILVS 483
++Q R RVL+ F+ G S+L++
Sbjct: 287 KAQGARTRVLDGFKNGEISVLIA 309
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 432 (157.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 100/308 (32%), Positives = 167/308 (54%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F E + ++ E+G+ +PT +QA P LSG D++A A TGSGKT + P
Sbjct: 8 VASFAELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPL 67
Query: 187 IVHVNSQRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSAT--ATRVACVFGGAPKGP 243
+ ++ + G + LVL PTRELAQQ+ + S ++ FGG
Sbjct: 68 LQRLSEAKSADKSAGVVRCLVLVPTRELAQQVADSFLSYASHFNGQLKIVAAFGGVSVNL 127
Query: 244 QVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQI 303
Q+++L+ GA++++ATPGRL+D L + L + S VLDEADRML +GF ++ +++ +
Sbjct: 128 QMQSLRAGADVLVATPGRLLDLLASNALKLTQVSAFVLDEADRMLSLGFTEELEQVLAAL 187
Query: 304 RPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKL 363
+Q L++SAT+P+EV+ L L ++ ++ S + I Q V +K L
Sbjct: 188 PRQKQTLLFSATFPEEVRALTTKLLHQPLEYHLQSEQEST---IEQRVITVNREQKTALL 244
Query: 364 QGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRI 423
L+ Q + S+ +IFV K + + + + +G +A HG+K+Q R RVL+ F+
Sbjct: 245 AHLIKQ---HQWSQALIFVSAKNTCNHLAQKLSKRGISAEVFHGDKAQGARTRVLDGFKN 301
Query: 424 GRASILVS 431
G S+L++
Sbjct: 302 GEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 482 VSHYNKSQQERDRVLNEFRIGRASILVS 509
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 508 VSHYNKSQQERDRVLNEFRIGRASILVS 535
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 534 VSHYNKSQQERDRVLNEFRIGRASILVS 561
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 560 VSHYNKSQQERDRVLNEFRIGRASILVS 587
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 586 VSHYNKSQQERDRVLNEFRIGRASILVS 613
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 612 VSHYNKSQQERDRVLNEFRIGRASILVS 639
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 57 (25.1 bits), Expect = 1.3e-43, Sum P(2) = 1.3e-43
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 638 VSHYNKSQQERDRVLNEFRIGRASILVS 665
V H +K+Q R RVL+ F+ G S+L++
Sbjct: 282 VFHGDKAQGARTRVLDGFKNGEISVLIA 309
Score = 45 (20.9 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 461 ESQQKRDRVLNEFRIGRASILVS 483
++Q R RVL+ F+ G S+L++
Sbjct: 287 KAQGARTRVLDGFKNGEISVLIA 309
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 464 (168.4 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 104/302 (34%), Positives = 172/302 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++K I E + PT IQ Q P+ L+ D++A A+TG+GKT + P +
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+ S +P + LVL PTRELAQQ+ +G T + +GG Q+ L+
Sbjct: 67 LISVQPCKPELR--ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELK 124
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G +I+IATPGRL+D L +++L LV DEADRMLDMGF+ +I +I + +Q
Sbjct: 125 VGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQT 184
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT+ ++ K++++ LV+ + I N A+ ++ Q+V + ++ +L L
Sbjct: 185 LLFSATFADDIYKMSKNILVEPKMVEIDEKNKAAD-DVEQLV-YGVDADRKRELTSFL-- 240
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
IGS + ++F TK+ ADD+ + + G ++AIHG+KSQ R++ L+EF+ G+ L
Sbjct: 241 IGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRAL 300
Query: 430 VS 431
++
Sbjct: 301 IA 302
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 464 (168.4 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 104/302 (34%), Positives = 172/302 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++K I E + PT IQ Q P+ L+ D++A A+TG+GKT + P +
Sbjct: 7 FSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQ 66
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+ S +P + LVL PTRELAQQ+ +G T + +GG Q+ L+
Sbjct: 67 LISVQPCKPELR--ALVLTPTRELAQQVHKSFCHYGQFTDVTIGIAYGGVSTKKQISELK 124
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G +I+IATPGRL+D L +++L LV DEADRMLDMGF+ +I +I + +Q
Sbjct: 125 VGVDILIATPGRLLDLLRTESVSLSNIETLVFDEADRMLDMGFKEEIDQITQYLPKTKQT 184
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT+ ++ K++++ LV+ + I N A+ ++ Q+V + ++ +L L
Sbjct: 185 LLFSATFADDIYKMSKNILVEPKMVEIDEKNKAAD-DVEQLV-YGVDADRKRELTSFL-- 240
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
IGS + ++F TK+ ADD+ + + G ++AIHG+KSQ R++ L+EF+ G+ L
Sbjct: 241 IGSRNWKQVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRAL 300
Query: 430 VS 431
++
Sbjct: 301 IA 302
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 464 (168.4 bits), Expect = 1.5e-43, P = 1.5e-43
Identities = 117/336 (34%), Positives = 175/336 (52%)
Query: 102 HDVTVKGRYYLLRLESRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPI 161
HD + R + ++ + G VP P+ F C PP ++ + G+ PT IQ Q P
Sbjct: 85 HDAQLLRRKLDIHVQGQ-GSAVPPPVLTFTSCGLPPKLLLNLETAGYDFPTPIQMQAIPA 143
Query: 162 ALSGCDLVAIAKTGSGKTLGYIAPAIVHV---NSQRPLRSGEGPIVLVLAPTRELAQQIE 218
AL+G L+A A TGSGKT ++ P I +S+ P P+ +VLAPTREL Q+E
Sbjct: 144 ALTGKSLLASADTGSGKTASFLVPIISRCTTYHSEHPSDQRRNPLAMVLAPTRELCVQVE 203
Query: 219 TVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSY 278
A G + A V GG P Q+ +Q G E++I TPGR++D L + TI L
Sbjct: 204 DQAKMLGKGLPFKTALVVGGDPMSGQLYRIQQGVELIIGTPGRVVDLLSKHTIELDNIMT 263
Query: 279 LVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGS 338
VLDE D ML GF Q+ +I Q QVL++SAT +EV+K+ + + ++IG+
Sbjct: 264 FVLDEVDCMLQRGFRDQVMQIF-QALSQPQVLLFSATISREVEKVGGSLAKEIILVSIGN 322
Query: 339 LN-PTANHNIVQI-VDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVR 396
N P N + I VD Q+ +K + + L SQ + +++V ++ AD + ++
Sbjct: 323 PNKPNKAVNQLAIWVDAKQKKQKLFDI--LRSQ--NHFKPPAVVYVSSRVGADLLANAIT 378
Query: 397 N-KGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
G A++IHG K +ER V+ F G +LVS
Sbjct: 379 VVTGVKALSIHGEKPMKERRDVMGSFLGGEVPVLVS 414
>UNIPROTKB|P96614 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003723 "RNA binding" evidence=IDA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA] [GO:0009409
"response to cold" evidence=IGI] [GO:0010501 "RNA secondary
structure unwinding" evidence=IDA] [GO:0043590 "bacterial nucleoid"
evidence=IDA] [GO:0005840 "ribosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0009409
GO:GO:0003723 EMBL:AL009126 GenomeReviews:AL009126_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 HSSP:Q58083 ProtClustDB:CLSK886742
EMBL:AB001488 PIR:D69772 RefSeq:NP_388339.1
ProteinModelPortal:P96614 SMR:P96614 IntAct:P96614 DNASU:938170
EnsemblBacteria:EBBACT00000000739 GeneID:938170 KEGG:bsu:BSU04580
PATRIC:18972500 GenoList:BSU04580 BioCyc:BSUB:BSU04580-MONOMER
GO:GO:0010501 Uniprot:P96614
Length = 494
Score = 461 (167.3 bits), Expect = 3.3e-43, P = 3.3e-43
Identities = 105/302 (34%), Positives = 170/302 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F++ N +MK I MGF+ T IQAQ P+ LS D++ A+TG+GKT + P +
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+N + P +V+APTRELA Q+ G +V ++GG G Q++AL+
Sbjct: 65 INPESPNIQA-----IVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQDIGRQIRALK 119
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGRL+D++ + TI L+ + +V+DEAD ML+MGF I I+ + + Q
Sbjct: 120 KNPNIIVGTPGRLLDHINRRTIRLNNVNTVVMDEADEMLNMGFIDDIESILSNVPSEHQT 179
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T + NI Q QE +K L LL
Sbjct: 180 LLFSATMPAPIKRIAERFMTEPEHVKVKAKEMTVS-NIQQFYLEVQERKKFDTLTRLLD- 237
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D++ ++ +G+AA IHG+ +Q +R L +F+ G +L
Sbjct: 238 IQSPELA--IVFGRTKRRVDELAEALNLRGYAAEGIHGDLTQAKRMVALRKFKEGAIEVL 295
Query: 430 VS 431
V+
Sbjct: 296 VA 297
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 461 (167.3 bits), Expect = 3.3e-43, P = 3.3e-43
Identities = 98/305 (32%), Positives = 169/305 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
++ F++ ++K + ++GF+ PT IQ + P+ L G +LV A TG+GKT Y+ P
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVK 246
+ QR ++ G+ VL++ PTRELA Q+ G R V+GG Q++
Sbjct: 61 L-----QR-IQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIR 114
Query: 247 ALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD 306
L+ G E+++ TPGR++D++ + T ++LDEAD MLDMGF I I+ +
Sbjct: 115 GLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNR 174
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
+Q L++SAT P ++ + + FL Y + + T + I V E + K++GL
Sbjct: 175 QQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKT----VPAIRQVYYELPETEKIEGL 230
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
+S + SE + I+F TK++ D++ + +G+AA +HG+ SQ+ER + + F+ G+
Sbjct: 231 VSILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKT 290
Query: 427 SILVS 431
+LV+
Sbjct: 291 ELLVA 295
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 461 (167.3 bits), Expect = 3.3e-43, P = 3.3e-43
Identities = 98/305 (32%), Positives = 169/305 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
++ F++ ++K + ++GF+ PT IQ + P+ L G +LV A TG+GKT Y+ P
Sbjct: 1 MEEFKKLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPV 60
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVK 246
+ QR ++ G+ VL++ PTRELA Q+ G R V+GG Q++
Sbjct: 61 L-----QR-IQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGGQAIERQIR 114
Query: 247 ALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD 306
L+ G E+++ TPGR++D++ + T ++LDEAD MLDMGF I I+ +
Sbjct: 115 GLRQGVEVIVGTPGRILDHIGRKTFPAAEIKIVILDEADEMLDMGFIDDIEAILNTLTNR 174
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
+Q L++SAT P ++ + + FL Y + + T + I V E + K++GL
Sbjct: 175 QQTLLFSATLPAPIKTIIKKFLGGYKTVKLVGREKT----VPAIRQVYYELPETEKIEGL 230
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
+S + SE + I+F TK++ D++ + +G+AA +HG+ SQ+ER + + F+ G+
Sbjct: 231 VSILNSELPIQAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKT 290
Query: 427 SILVS 431
+LV+
Sbjct: 291 ELLVA 295
>UNIPROTKB|O05855 [details] [associations]
symbol:rhlE "PROBABLE ATP-DEPENDENT RNA HELICASE RHLE"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005618
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0003676
EMBL:BX842582 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
HOGENOM:HOG000268807 EMBL:CP003248 PIR:D70595 RefSeq:NP_217727.1
RefSeq:NP_337835.1 RefSeq:YP_006516683.1 SMR:O05855
EnsemblBacteria:EBMYCT00000003215 EnsemblBacteria:EBMYCT00000071518
GeneID:13318029 GeneID:888840 GeneID:923099 KEGG:mtc:MT3307
KEGG:mtu:Rv3211 KEGG:mtv:RVBD_3211 PATRIC:18129030
TubercuList:Rv3211 OMA:RWQLIDK ProtClustDB:CLSK792349
Uniprot:O05855
Length = 527
Score = 460 (167.0 bits), Expect = 4.3e-43, P = 4.3e-43
Identities = 116/311 (37%), Positives = 172/311 (55%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNS---QRP 195
I++ + E G + P AIQ P+AL G D++ A+TG GKT + P + + S RP
Sbjct: 21 IVRALGEEGIKRPFAIQELTLPLALDGEDVIGQARTGMGKTFAFGVPLLQRITSGDGTRP 80
Query: 196 LRSGEGPIVLVLAPTRELAQQIE----------TVANDFGSATATR----VACVFGGAPK 241
L +G P LV+ PTREL Q+ T D A A R V ++GG P
Sbjct: 81 L-TG-APRALVVVPTRELCLQVTDDLATAGKYLTAGPDTDDAAAVRRRLSVVSIYGGRPY 138
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
PQ++AL+ GA++V+ TPGRL+D +QG + L S LVLDEAD MLD+GF P I +I+
Sbjct: 139 EPQIEALRAGADVVVGTPGRLLDLCQQGHLQLGGLSVLVLDEADEMLDLGFLPDIERILR 198
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
QI DRQ +++SAT P + LA F+V + + + +A H+ + V + H D
Sbjct: 199 QIPADRQSMLFSATMPDPIITLARTFMVRPTHIRAEAPHSSAVHDATEQF-VYRAHALD- 256
Query: 362 KLQGLLSQIGSERT-SKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNE 420
K++ L+S++ R T+IF TKR A + + +G+A A+HG+ Q R++ L
Sbjct: 257 KVE-LVSRVLQARDRGATMIFTRTKRTAQKVADELTERGFAVGAVHGDLGQLAREKALKA 315
Query: 421 FRIGRASILVS 431
FR G +LV+
Sbjct: 316 FRTGGIDVLVA 326
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 477 (173.0 bits), Expect = 4.6e-43, P = 4.6e-43
Identities = 116/334 (34%), Positives = 183/334 (54%)
Query: 117 SRPGKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGS 176
S G +PRP++ +EE ++K + G++ P+ IQ P+ L D++ IA+TGS
Sbjct: 302 SYKGSRIPRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGS 361
Query: 177 GKTLGYIAPAIVHVNSQRPL---RSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVA 233
GKT ++ P + +++ P+ EGP +V+APTRELAQQIE F RV
Sbjct: 362 GKTAAFVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVT 421
Query: 234 CVFGGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFE 293
+ GG Q + G EIVIATPGRLID LE+ L++ +Y+VLDEADRM+DMGFE
Sbjct: 422 SIVGGQSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFE 481
Query: 294 PQIRKII-----GQIRPD--------RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLN 340
PQ+ ++ ++P+ +++ + + + E Y++ +
Sbjct: 482 PQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYLRNPVVVTI 541
Query: 341 PTANHN---IVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN 397
TA I Q V + +E EK ++LQ LL ++G E+T+ I+FV TK+ D I +++
Sbjct: 542 GTAGKTTDLISQHVIMMKESEKFFRLQKLLDELG-EKTA--IVFVNTKKNCDSIAKNLDK 598
Query: 398 KGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
G+ +HG KSQ++R+ L FR R ++LV+
Sbjct: 599 AGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVA 632
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 459 (166.6 bits), Expect = 5.5e-43, P = 5.5e-43
Identities = 107/303 (35%), Positives = 168/303 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++K + E+G+Q+PT IQ Q P L+G +++A A+TG+GKT ++ P ++H
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLP-LLH 61
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+ P + ++L PTRELA Q+E N + ++GG PQ K L
Sbjct: 62 RFADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLI 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G ++++ATPGRL+D Q I S LVLDEADRMLDMGF I II ++ RQ
Sbjct: 122 EGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQN 181
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT K+V+ LA+ + D +++ I N A+ I Q + +KD K LLS
Sbjct: 182 LLFSATLSKQVKALAKTAIPDAIEIEISRKN-AASTQIDQWLTTV---DKDRK-SALLSH 236
Query: 370 IGSERT-SKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
+ E ++ +IF++TK A + + +G A A H +SQ R+++L +F+ G+
Sbjct: 237 LIKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPF 296
Query: 429 LVS 431
LV+
Sbjct: 297 LVA 299
>TIGR_CMR|SO_1383 [details] [associations]
symbol:SO_1383 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 RefSeq:NP_717003.1
ProteinModelPortal:Q8EH47 GeneID:1169204 KEGG:son:SO_1383
PATRIC:23522420 OMA:SEVVHGE ProtClustDB:CLSK906234 Uniprot:Q8EH47
Length = 433
Score = 459 (166.6 bits), Expect = 5.5e-43, P = 5.5e-43
Identities = 107/305 (35%), Positives = 169/305 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
FE +F P I++ I + G+Q T IQ Q P G D++A A+TG+GKT + P +
Sbjct: 3 FESFSFCPEILRAISDCGYQKMTPIQQQAIPAIRRGQDVLASAQTGTGKTAAFALPILQK 62
Query: 190 V--NSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
+ N L+S VL+L PTRELA Q+ + V ++GG Q +
Sbjct: 63 MVENPSETLKSNTR--VLILTPTRELAAQVAENVEAYSKYLNFSVLTIYGGVKVETQAQK 120
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ GA+I++ATPGRL+++L ++L +LVLDEADRMLDMGF I+KI+ + R
Sbjct: 121 LKRGADIIVATPGRLLEHLTACNLSLSSVDFLVLDEADRMLDMGFSADIQKILQAVNKKR 180
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q L++SAT+ V+KLA + ++ ++ N TA+ + Q+V ++ K + LL
Sbjct: 181 QNLLFSATFSSAVKKLANEMMIKPQVISADKQNTTAD-TVSQVVYPVEQRRK----RELL 235
Query: 368 SQ-IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
S+ IG + + ++F T+ AD + + + G + +HG K+Q R R L EF G+
Sbjct: 236 SELIGKKNWQQVLVFTATRDAADTLVKELNLDGIPSEVVHGEKAQGSRRRALREFVSGKV 295
Query: 427 SILVS 431
+LV+
Sbjct: 296 RVLVA 300
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 459 (166.6 bits), Expect = 5.5e-43, P = 5.5e-43
Identities = 107/303 (35%), Positives = 168/303 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++K + E+G+Q+PT IQ Q P L+G +++A A+TG+GKT ++ P ++H
Sbjct: 3 FSQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLP-LLH 61
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+ P + ++L PTRELA Q+E N + ++GG PQ K L
Sbjct: 62 RFADAPKIRPKRVRSIILTPTRELALQVEQNINQYAKYLPLTAMAMYGGVDAAPQKKRLI 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G ++++ATPGRL+D Q I S LVLDEADRMLDMGF I II ++ RQ
Sbjct: 122 EGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIEDINNIIEKLPEQRQN 181
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT K+V+ LA+ + D +++ I N A+ I Q + +KD K LLS
Sbjct: 182 LLFSATLSKQVKALAKTAIPDAIEIEISRKN-AASTQIDQWLTTV---DKDRK-SALLSH 236
Query: 370 IGSERT-SKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
+ E ++ +IF++TK A + + +G A A H +SQ R+++L +F+ G+
Sbjct: 237 LIKENNWAQALIFIQTKHGAAKLVSQLEKRGIVAEAFHSGRSQAIREQLLIDFKAGKVPF 296
Query: 429 LVS 431
LV+
Sbjct: 297 LVA 299
>UNIPROTKB|Q11039 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A homolog"
species:1773 "Mycobacterium tuberculosis" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005618
GO:GO:0006355 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842576 GO:GO:0006351 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
PIR:E70752 RefSeq:NP_215769.1 RefSeq:NP_335736.1
RefSeq:YP_006514628.1 ProteinModelPortal:Q11039 SMR:Q11039
PRIDE:Q11039 EnsemblBacteria:EBMYCT00000002426
EnsemblBacteria:EBMYCT00000070115 GeneID:13319832 GeneID:887069
GeneID:924778 KEGG:mtc:MT1292 KEGG:mtu:Rv1253 KEGG:mtv:RVBD_1253
PATRIC:18124606 TubercuList:Rv1253 OMA:LPQGMPK
ProtClustDB:CLSK791051 Uniprot:Q11039
Length = 563
Score = 458 (166.3 bits), Expect = 7.2e-43, P = 7.2e-43
Identities = 103/304 (33%), Positives = 173/304 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + P +++ I ++G+++PTAIQA P ++G D+V +A+TG+GKT + P +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGS-ATATRVACVFGGAPKGPQVKAL 248
++ + + P LVL PTRELA Q+ +G+ + V ++GG+ Q+ L
Sbjct: 75 IDI-----TSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSSYAVQLAGL 129
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ GA++V+ TPGR+ID+LE+ T++L R +LVLDEAD ML MGF + +I+ + +Q
Sbjct: 130 RRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADDVERILSETPEYKQ 189
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ-IVDVCQEHEKDYKLQGLL 367
V ++SAT P ++KL+ +L D ++ + A NI Q + V + K+ L
Sbjct: 190 VALFSATMPPAIRKLSAKYLHDPFEVTCKAKTAVAE-NISQSYIQVAR------KMDALT 242
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ E I+FV TK+ ++I +R +G++A AI G+ Q +R+R + R G
Sbjct: 243 RVLEVEPFEAMIVFVRTKQATEEIAEKLRARGFSAAAISGDVPQAQRERTITALRDGDID 302
Query: 428 ILVS 431
ILV+
Sbjct: 303 ILVA 306
>TIGR_CMR|GSU_0522 [details] [associations]
symbol:GSU_0522 "ATP-dependent RNA helicase RhlB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0006401
"RNA catabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K03732
RefSeq:NP_951580.1 ProteinModelPortal:Q74FT4 GeneID:2685920
KEGG:gsu:GSU0522 PATRIC:22023799 OMA:LAYEFMN ProtClustDB:CLSK827899
BioCyc:GSUL243231:GH27-482-MONOMER Uniprot:Q74FT4
Length = 443
Score = 436 (158.5 bits), Expect = 8.0e-43, Sum P(2) = 8.0e-43
Identities = 111/309 (35%), Positives = 171/309 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + N P +M+ + + GF T IQ + P++L G D+ A+TG+GKT ++
Sbjct: 3 FADLNLPEQVMQGVADAGFSDCTPIQEKTLPLSLGGKDVAGQAQTGTGKTAAFLISLFTK 62
Query: 190 VNSQRPLRSGEG-----PIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQ 244
+ LRSG G P ++LAPTREL QIE A G+ + ++GG Q
Sbjct: 63 L-----LRSGRGGERRHPRAIILAPTRELVVQIEKDAQVLGAHCGFTIQAIYGGVDYMKQ 117
Query: 245 VKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
AL+ GA++V+ TPGRLIDYL+Q +L LV+DEADRM DMGF +R I+ ++
Sbjct: 118 KNALKEGADVVVGTPGRLIDYLKQKVYSLKEIEMLVIDEADRMFDMGFIADLRFILRRLP 177
Query: 305 P-D-RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK 362
P D RQ LM+SAT + V +LA +F+ ++ + TA + Q++ EK
Sbjct: 178 PYDKRQNLMFSATLNQRVMELAYEFMNVPEKVAVTPEQMTAER-VEQVLYHVGRKEKFPL 236
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L GLL + G ERT +IFV TKR+A+ + + + I G+ Q++R ++L +F+
Sbjct: 237 LLGLLRKEGMERT---MIFVNTKREAEFLDERLNANDFPCRVISGDVEQRKRLKILEDFK 293
Query: 423 IGRASILVS 431
G+ I+++
Sbjct: 294 SGKLPIMIA 302
Score = 45 (20.9 bits), Expect = 8.0e-43, Sum P(2) = 8.0e-43
Identities = 7/21 (33%), Positives = 16/21 (76%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q+KR ++L +F+ G+ I+++
Sbjct: 282 QRKRLKILEDFKSGKLPIMIA 302
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 456 (165.6 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 114/315 (36%), Positives = 174/315 (55%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ V RPI FE C+ P + + + G++ PT IQ Q P+ L G D++A A TGSGKT
Sbjct: 195 GQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKT 254
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGG 238
++ P I+ R L + P L+L PTRELA QIE A + S + + GG
Sbjct: 255 AAFLLPVIM-----RALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGG 309
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ+ LQ +++IATPGRL+D ++Q ++ L +V+DEAD ML MGF+ Q+
Sbjct: 310 LPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLD 369
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLN-PTANHNIVQIVDVCQEH 357
I+ I D Q ++ SAT P +++LA L + V++ G N P AN + QI+ ++
Sbjct: 370 ILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCAN--VRQIILWVEDP 427
Query: 358 EKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDR 416
K KL +L+ + ++FV+ K AD ++ +V+ G +++IH KSQ ER
Sbjct: 428 AKKKKLFEILNDKKLFKPP-VLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKN 486
Query: 417 VLNEFRIGRASILVS 431
+L G ++VS
Sbjct: 487 ILKGLLEGDYEVVVS 501
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 456 (165.6 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 114/315 (36%), Positives = 174/315 (55%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ V RPI FE C+ P + + + G++ PT IQ Q P+ L G D++A A TGSGKT
Sbjct: 195 GQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKT 254
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGG 238
++ P I+ R L + P L+L PTRELA QIE A + S + + GG
Sbjct: 255 AAFLLPVIM-----RALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGG 309
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ+ LQ +++IATPGRL+D ++Q ++ L +V+DEAD ML MGF+ Q+
Sbjct: 310 LPLPPQLYRLQQHVKVIIATPGRLLDIIKQSSVELCGVKIVVVDEADTMLKMGFQQQVLD 369
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLN-PTANHNIVQIVDVCQEH 357
I+ I D Q ++ SAT P +++LA L + V++ G N P AN + QI+ ++
Sbjct: 370 ILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCAN--VRQIILWVEDP 427
Query: 358 EKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDR 416
K KL +L+ + ++FV+ K AD ++ +V+ G +++IH KSQ ER
Sbjct: 428 AKKKKLFEILNDKKLFKPP-VLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKN 486
Query: 417 VLNEFRIGRASILVS 431
+L G ++VS
Sbjct: 487 ILKGLLEGDYEVVVS 501
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 443 (161.0 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 105/309 (33%), Positives = 171/309 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F P ++ + +GF + T IQA P L+G D++ A+TG+GKT + PA+
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGS-ATATRVACVFGGAPKGPQVKAL 248
+++ S + P ++VLAPTRELA Q+ FG RVA ++GG GPQ + L
Sbjct: 77 IDT-----SIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQFQQL 131
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ GA++V+ TPGRL+D+L + ++ L VLDEAD ML+MGF I+ I+ I Q
Sbjct: 132 ERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQ 191
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS 368
+ ++SAT P ++K+A FL D + + ++ A NI Q +K+ G+
Sbjct: 192 MCLFSATMPPAIRKIANRFLKDPEHIKVAAVKK-AKANITQYA---------WKVSGITK 241
Query: 369 QIGSERTSKT------IIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
ER ++ IIFV T+ DI + G+ A+A++G+ +Q +R+R +++ +
Sbjct: 242 MTALERIAEVVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMK 301
Query: 423 IGRASILVS 431
G++SILV+
Sbjct: 302 SGKSSILVA 310
Score = 54 (24.1 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 34/149 (22%), Positives = 68/149 (45%)
Query: 540 SQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQER--D 597
+Q +R+R +++ + G++SILV+ D V I R S+++++ E
Sbjct: 289 NQAQRERCIDQMKSGKSSILVA--------TDVVARGLDIPRISLVINYDLPGDNEAYVH 340
Query: 598 RVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQ-QERDRV-LNEF 655
R+ R GR + ++ +E + + R+ ++L +Y+ Q+ ++ +
Sbjct: 341 RIGRTGRAGREGMSIAFVRP--REMYSIRHYERLTNGTVL--NYDLPNIQDIGKIRIERT 396
Query: 656 RIGRASILVSDFDILRQWRIAWDEAAVAE 684
R+ A I V+D DI I AA +E
Sbjct: 397 RVEVAKI-VADKDISSMREIVEGMAAESE 424
Score = 49 (22.3 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 8/22 (36%), Positives = 18/22 (81%)
Query: 436 SQQERDRVLNEFRIGRASILVS 457
+Q +R+R +++ + G++SILV+
Sbjct: 289 NQAQRERCIDQMKSGKSSILVA 310
Score = 49 (22.3 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 8/22 (36%), Positives = 18/22 (81%)
Query: 488 SQQERDRVLNEFRIGRASILVS 509
+Q +R+R +++ + G++SILV+
Sbjct: 289 NQAQRERCIDQMKSGKSSILVA 310
Score = 49 (22.3 bits), Expect = 4.7e-42, Sum P(2) = 4.7e-42
Identities = 8/22 (36%), Positives = 18/22 (81%)
Query: 514 SQQERDRVLNEFRIGRASILVS 535
+Q +R+R +++ + G++SILV+
Sbjct: 289 NQAQRERCIDQMKSGKSSILVA 310
Score = 48 (22.0 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 8/22 (36%), Positives = 18/22 (81%)
Query: 462 SQQKRDRVLNEFRIGRASILVS 483
+Q +R+R +++ + G++SILV+
Sbjct: 289 NQAQRERCIDQMKSGKSSILVA 310
>UNIPROTKB|Q0C4B9 [details] [associations]
symbol:HNE_0695 "Putative ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:YP_759424.1 ProteinModelPortal:Q0C4B9 STRING:Q0C4B9
GeneID:4287361 KEGG:hne:HNE_0695 PATRIC:32214196 OMA:LPMITIL
BioCyc:HNEP228405:GI69-738-MONOMER Uniprot:Q0C4B9
Length = 536
Score = 437 (158.9 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 102/302 (33%), Positives = 156/302 (51%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + I+K + E G+ PT IQ + P L G D+ +A+TG+GKT ++ P I
Sbjct: 6 FADFGLAENILKAVTESGYTIPTPIQREAIPHILMGGDVTGVAQTGTGKTAAFVLPMIQR 65
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+++ R P L+L PTRELA Q+ +G +A + GG Q LQ
Sbjct: 66 LSTGRA--RARMPRCLILCPTRELAAQVAENFEKYGKYLKLTMALLIGGVSFKEQETLLQ 123
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G +++IATPGRL+D ++G + + L++DEADRMLDMGF P I KI ++ +RQ
Sbjct: 124 RGVDVLIATPGRLMDQFDRGKLLMMGVETLIIDEADRMLDMGFIPDIEKICAKLPANRQT 183
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT+P ++Q+LA+ F D ++ + TA I Q V ++ + L
Sbjct: 184 LLFSATFPTDIQRLAKTFQKDPKKIEVTRPAQTAE-TISQFVVKLPTNDGKARRTALRRV 242
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I + I+F K + D + S+ G A IHG+ Q R L FR G+ +L
Sbjct: 243 IEATNVKNGIVFCNRKVEVDIVAASLTKHGHDAAPIHGDLPQSVRSETLQRFRDGKLKLL 302
Query: 430 VS 431
V+
Sbjct: 303 VA 304
Score = 41 (19.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H + Q R L FR G+ +LV+
Sbjct: 279 HGDLPQSVRSETLQRFRDGKLKLLVA 304
Score = 41 (19.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H + Q R L FR G+ +LV+
Sbjct: 279 HGDLPQSVRSETLQRFRDGKLKLLVA 304
Score = 41 (19.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + Q R L FR G+ +LV+
Sbjct: 279 HGDLPQSVRSETLQRFRDGKLKLLVA 304
Score = 41 (19.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + Q R L FR G+ +LV+
Sbjct: 279 HGDLPQSVRSETLQRFRDGKLKLLVA 304
Score = 41 (19.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + Q R L FR G+ +LV+
Sbjct: 279 HGDLPQSVRSETLQRFRDGKLKLLVA 304
Score = 41 (19.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + Q R L FR G+ +LV+
Sbjct: 279 HGDLPQSVRSETLQRFRDGKLKLLVA 304
Score = 41 (19.5 bits), Expect = 1.6e-42, Sum P(2) = 1.6e-42
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + Q R L FR G+ +LV+
Sbjct: 279 HGDLPQSVRSETLQRFRDGKLKLLVA 304
Score = 38 (18.4 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 437 QQERDRVLNEFRIGRASILVS 457
Q R L FR G+ +LV+
Sbjct: 284 QSVRSETLQRFRDGKLKLLVA 304
Score = 38 (18.4 bits), Expect = 3.4e-42, Sum P(2) = 3.4e-42
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 463 QQKRDRVLNEFRIGRASILVS 483
Q R L FR G+ +LV+
Sbjct: 284 QSVRSETLQRFRDGKLKLLVA 304
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 453 (164.5 bits), Expect = 2.6e-42, P = 2.6e-42
Identities = 112/314 (35%), Positives = 171/314 (54%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ V RPI FE C FP + + G++ PT IQ Q P+ L G D++A A TGSGKT
Sbjct: 196 GQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKT 255
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGG 238
++ P I R L + P L+L PTRELA QIE A + S + + GG
Sbjct: 256 AAFLLPVIT-----RALCESKTPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGG 310
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ+ L+ +++IATPGRL+D ++Q ++ L +V+DEAD ML MGF+ Q+
Sbjct: 311 LPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLD 370
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHE 358
I+ + D Q ++ SAT P +++LA L + V++ G N + ++ QI+ +E
Sbjct: 371 ILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCS-SVRQIILWVEEPA 429
Query: 359 KDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDRV 417
K KL +L+ + ++FV+ K AD ++ +V+ G +V+IH KSQ ER +
Sbjct: 430 KKKKLFEILNDKKLFKPP-VLVFVDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNI 488
Query: 418 LNEFRIGRASILVS 431
L G ++VS
Sbjct: 489 LKGLLEGDYEVVVS 502
>TIGR_CMR|CPS_2658 [details] [associations]
symbol:CPS_2658 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 RefSeq:YP_269372.1
ProteinModelPortal:Q480Z7 GeneID:3520428 KEGG:cps:CPS_2658
PATRIC:21468367 OMA:ERNFDSS BioCyc:CPSY167879:GI48-2720-MONOMER
Uniprot:Q480Z7
Length = 399
Score = 433 (157.5 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 100/294 (34%), Positives = 157/294 (53%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
I+ ++ G++ PT IQ + P ++G DL+ IA+TG+GKT + P I +
Sbjct: 13 IIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPIINKFGRNKIDIK 72
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAEIVIAT 258
+ L+L PTRELA QI +D+ + V+GG + QV +++ G +I++AT
Sbjct: 73 AKSTRSLILTPTRELASQIMQNIDDYSDGLGLKTKVVYGGVGRQAQVDSIELGLDILVAT 132
Query: 259 PGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPK 318
PGRL+D +E G IN VLDEAD MLDMGF ++ II ++ RQ L++SAT P
Sbjct: 133 PGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPA 192
Query: 319 EVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEH-EKDYKLQGLLSQIGSERTSK 377
E++ LAE L D ++ I TA + +V+ H +K K+ L + + K
Sbjct: 193 EIEILAEAILTDPTKIQI-----TAETVTIDLVNQSVYHLDKSNKVPLLFNILTKADYEK 247
Query: 378 TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+IF +TK AD I +++ A ++H K+Q R+ L F+ +LV+
Sbjct: 248 VLIFCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLVA 301
Score = 43 (20.2 bits), Expect = 2.9e-42, Sum P(2) = 2.9e-42
Identities = 25/121 (20%), Positives = 52/121 (42%)
Query: 581 RASILVS--HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILV 638
+ASI + H K+Q R+ L F+ +LV+ D + ++++
Sbjct: 267 KASITAASLHSGKTQAVREEALQNFKDSTLRVLVA--------TDVAARGIDVDNITLVI 318
Query: 639 SHYNKSQQERD---RVLNEFRIGRASILVSDFDILRQWRIAWD-EAAVAEAQHLPCIETQ 694
+ YN + R+ R+ R G++ + +S F + R + E ++ + +P + Q
Sbjct: 319 N-YNLPEDPRNYIHRIGRTARAGKSGMAIS-FAVENDIRQLTNIENSIGQV--IPVVTEQ 374
Query: 695 P 695
P
Sbjct: 375 P 375
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 452 (164.2 bits), Expect = 3.3e-42, P = 3.3e-42
Identities = 107/304 (35%), Positives = 172/304 (56%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F N P ++ + MGF T IQAQ P L G D++ KTGSGKT + + +
Sbjct: 6 FAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVLSN 65
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGGAPKGPQVKAL 248
+N +R R LVL PTRELA Q+ T G A +V + GG P GPQ+ +L
Sbjct: 66 LNVKR-FRVQ----ALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSL 120
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
+ GA I++ TPGR++D+L + I+L + LVLDEADRML+MGF+ + II +RQ
Sbjct: 121 EHGAHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQ 180
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ-IVDVCQEHEKDYKLQGLL 367
L++SAT+P ++++A+ + + + + + + T++ I Q V +D L+ LL
Sbjct: 181 TLLFSATYPASIEQIAQSVTRNALMIKVEATHDTSS--IRQYFYKVEGSAARDEALETLL 238
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
+ + TS +++F TKR+ ++ ++ G++ + +HG+ Q+ERD+ L +F S
Sbjct: 239 --LHHQPTS-SVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSIS 295
Query: 428 ILVS 431
ILV+
Sbjct: 296 ILVA 299
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 451 (163.8 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 120/377 (31%), Positives = 196/377 (51%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++ + E+G PT IQ Q P L G D++A A+TG+GKT + P I
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 190 VNSQRPLRSGEGPIV--LVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
Q R + LVL PTRELAQQ+ + T ++ V+GG Q+
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G +I+IATPGRL+D+ ++ L + LVLDEADRMLDMGF P +++++ ++ P R
Sbjct: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q L +SAT+ +++ +A + D +++ + N TA + Q+V + K L L
Sbjct: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAE-TVQQMVYPVDKKRKRELLSYL- 245
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
IGS+ + ++F +T++ +D + ++ G AV+I+G+KSQ R + L++F+ G+
Sbjct: 246 --IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVR 303
Query: 428 ILVSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASI------L 481
L++ D I + +V+ Y + D V R GRA + L
Sbjct: 304 ALIAT--------DVAARGLDIAQLEQVVN-YDMPFKAEDYVHRIGRTGRAGLAGLAVSL 354
Query: 482 VSHYNKSQQER-DRVLN 497
+SH + Q E +R+LN
Sbjct: 355 LSHDEQPQLEAIERLLN 371
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 451 (163.8 bits), Expect = 4.3e-42, P = 4.3e-42
Identities = 120/377 (31%), Positives = 196/377 (51%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++ + E+G PT IQ Q P L G D++A A+TG+GKT + P I
Sbjct: 8 FSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
Query: 190 VNSQRPLRSGEGPIV--LVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKA 247
Q R + LVL PTRELAQQ+ + T ++ V+GG Q+
Sbjct: 68 FIEQPWQREANSKEIRALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGTSMKVQLNH 127
Query: 248 LQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
L+ G +I+IATPGRL+D+ ++ L + LVLDEADRMLDMGF P +++++ ++ P R
Sbjct: 128 LRGGVDILIATPGRLLDHAHVKSLFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLR 187
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
Q L +SAT+ +++ +A + D +++ + N TA + Q+V + K L L
Sbjct: 188 QTLFFSATFDSKIKAVAYRIMRDPIEVQVTPSNSTAE-TVQQMVYPVDKKRKRELLSYL- 245
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
IGS+ + ++F +T++ +D + ++ G AV+I+G+KSQ R + L++F+ G+
Sbjct: 246 --IGSKNWQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVR 303
Query: 428 ILVSQYNKSQQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASI------L 481
L++ D I + +V+ Y + D V R GRA + L
Sbjct: 304 ALIAT--------DVAARGLDIAQLEQVVN-YDMPFKAEDYVHRIGRTGRAGLAGLAVSL 354
Query: 482 VSHYNKSQQER-DRVLN 497
+SH + Q E +R+LN
Sbjct: 355 LSHDEQPQLEAIERLLN 371
>UNIPROTKB|A0R8U6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:412694 "Bacillus thuringiensis str. Al Hakam" [GO:0003723
"RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 EMBL:CP000485 RefSeq:YP_893146.1
ProteinModelPortal:A0R8U6 STRING:A0R8U6
EnsemblBacteria:EBBACT00000069056 GeneID:4546566
GenomeReviews:CP000485_GR KEGG:btl:BALH_0232 PATRIC:18992499
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
BioCyc:BTHU412694:GH1W-393-MONOMER Uniprot:A0R8U6
Length = 528
Score = 432 (157.1 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 102/302 (33%), Positives = 168/302 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E +++ + MGF+ T IQA+ P AL G D++ A+TG+GKT + P +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V++ + S +G +V+APTRELA Q+ G R+ ++GG Q++AL+
Sbjct: 64 VDTHK--ESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGR++D++ + T+ L +VLDEAD ML+MGF I I+ + Q
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q QE +K L LL
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP-NIQQFYLEVQEKKKFDVLTRLLD- 236
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D+++ ++ +G+AA IHG+ +Q +R VL +F+ G +L
Sbjct: 237 IQSPELA--IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
>UNIPROTKB|Q63GX5 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:288681 "Bacillus cereus E33L" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0043590
"bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:CP000001 RefSeq:YP_081836.1
ProteinModelPortal:Q63GX5 STRING:Q63GX5
EnsemblBacteria:EBBACT00000041470 GeneID:3022962
GenomeReviews:CP000001_GR KEGG:bcz:BCZK0221 PATRIC:18883656
BioCyc:BCER288681:GHG7-745-MONOMER Uniprot:Q63GX5
Length = 528
Score = 432 (157.1 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 102/302 (33%), Positives = 168/302 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E +++ + MGF+ T IQA+ P AL G D++ A+TG+GKT + P +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V++ + S +G +V+APTRELA Q+ G R+ ++GG Q++AL+
Sbjct: 64 VDTHK--ESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGR++D++ + T+ L +VLDEAD ML+MGF I I+ + Q
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q QE +K L LL
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP-NIQQFYLEVQEKKKFDVLTRLLD- 236
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D+++ ++ +G+AA IHG+ +Q +R VL +F+ G +L
Sbjct: 237 IQSPELA--IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
>UNIPROTKB|Q6HPE6 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:281309 "Bacillus thuringiensis serovar konkukian str.
97-27" [GO:0003723 "RNA binding" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017355 RefSeq:YP_034574.1
ProteinModelPortal:Q6HPE6 EnsemblBacteria:EBBACT00000074889
GeneID:2854643 GenomeReviews:AE017355_GR KEGG:btk:BT9727_0219
PATRIC:18980863 BioCyc:BTHU281309:GJID-254-MONOMER Uniprot:Q6HPE6
Length = 528
Score = 432 (157.1 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 102/302 (33%), Positives = 168/302 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E +++ + MGF+ T IQA+ P AL G D++ A+TG+GKT + P +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V++ + S +G +V+APTRELA Q+ G R+ ++GG Q++AL+
Sbjct: 64 VDTHK--ESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGR++D++ + T+ L +VLDEAD ML+MGF I I+ + Q
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q QE +K L LL
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP-NIQQFYLEVQEKKKFDVLTRLLD- 236
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D+++ ++ +G+AA IHG+ +Q +R VL +F+ G +L
Sbjct: 237 IQSPELA--IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
>UNIPROTKB|Q73EU1 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:222523 "Bacillus cereus ATCC 10987" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 HOGENOM:HOG000268810 KO:K05592
OMA:IIDHINR ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE017194
RefSeq:NP_976595.1 ProteinModelPortal:Q73EU1 STRING:Q73EU1
DNASU:2752637 EnsemblBacteria:EBBACT00000029857 GeneID:2752637
GenomeReviews:AE017194_GR KEGG:bca:BCE_0267 PATRIC:18849372
Uniprot:Q73EU1
Length = 525
Score = 432 (157.1 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 102/302 (33%), Positives = 168/302 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E +++ + MGF+ T IQA+ P AL G D++ A+TG+GKT + P +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V++ + S +G +V+APTRELA Q+ G R+ ++GG Q++AL+
Sbjct: 64 VDTHK--ESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGR++D++ + T+ L +VLDEAD ML+MGF I I+ + Q
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q QE +K L LL
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP-NIQQFYLEVQEKKKFDVLTRLLD- 236
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D+++ ++ +G+AA IHG+ +Q +R VL +F+ G +L
Sbjct: 237 IQSPELA--IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
>UNIPROTKB|Q81IT9 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:226900 "Bacillus cereus ATCC 14579" [GO:0003723 "RNA
binding" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0043590 "bacterial nucleoid" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043590 KO:K05592 OMA:IIDHINR
ProtClustDB:CLSK915749 HSSP:Q58083 EMBL:AE016877 RefSeq:NP_830127.1
STRING:Q81IT9 DNASU:1202612 EnsemblBacteria:EBBACT00000032730
GeneID:1202612 GenomeReviews:AE016877_GR KEGG:bce:BC0259
PATRIC:32596146 BioCyc:BCER226900:GJEU-261-MONOMER Uniprot:Q81IT9
Length = 533
Score = 432 (157.1 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 102/302 (33%), Positives = 168/302 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E +++ + MGF+ T IQA+ P AL G D++ A+TG+GKT + P +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V++ + S +G +V+APTRELA Q+ G R+ ++GG Q++AL+
Sbjct: 64 VDTHK--ESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGR++D++ + T+ L +VLDEAD ML+MGF I I+ + Q
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q QE +K L LL
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP-NIQQFYLEVQEKKKFDVLTRLLD- 236
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D+++ ++ +G+AA IHG+ +Q +R VL +F+ G +L
Sbjct: 237 IQSPELA--IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
>UNIPROTKB|Q81VG0 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:1392 "Bacillus anthracis" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0043590 "bacterial nucleoid"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 432 (157.1 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 102/302 (33%), Positives = 168/302 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E +++ + MGF+ T IQA+ P AL G D++ A+TG+GKT + P +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V++ + S +G +V+APTRELA Q+ G R+ ++GG Q++AL+
Sbjct: 64 VDTHK--ESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGR++D++ + T+ L +VLDEAD ML+MGF I I+ + Q
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q QE +K L LL
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP-NIQQFYLEVQEKKKFDVLTRLLD- 236
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D+++ ++ +G+AA IHG+ +Q +R VL +F+ G +L
Sbjct: 237 IQSPELA--IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
>TIGR_CMR|BA_0247 [details] [associations]
symbol:BA_0247 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:198094 "Bacillus anthracis str. Ames" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 KO:K05592 OMA:IIDHINR ProtClustDB:CLSK915749
RefSeq:NP_842800.1 RefSeq:YP_016853.1 RefSeq:YP_026518.1
HSSP:Q58083 ProteinModelPortal:Q81VG0 DNASU:1087008
EnsemblBacteria:EBBACT00000010496 EnsemblBacteria:EBBACT00000018111
EnsemblBacteria:EBBACT00000022275 GeneID:1087008 GeneID:2818435
GeneID:2849489 KEGG:ban:BA_0247 KEGG:bar:GBAA_0247 KEGG:bat:BAS0233
BioCyc:BANT260799:GJAJ-255-MONOMER
BioCyc:BANT261594:GJ7F-263-MONOMER Uniprot:Q81VG0
Length = 528
Score = 432 (157.1 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 102/302 (33%), Positives = 168/302 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E +++ + MGF+ T IQA+ P AL G D++ A+TG+GKT + P +
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
V++ + S +G +V+APTRELA Q+ G R+ ++GG Q++AL+
Sbjct: 64 VDTHK--ESVQG---IVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQDINRQIRALK 118
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGR++D++ + T+ L +VLDEAD ML+MGF I I+ + Q
Sbjct: 119 KHPHIIVGTPGRILDHINRKTLRLQNVETVVLDEADEMLNMGFIEDIEAILTDVPETHQT 178
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T NI Q QE +K L LL
Sbjct: 179 LLFSATMPDPIRRIAERFMTEPQHIKVKAKEVTMP-NIQQFYLEVQEKKKFDVLTRLLD- 236
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
I S + I+F TKR+ D+++ ++ +G+AA IHG+ +Q +R VL +F+ G +L
Sbjct: 237 IQSPELA--IVFGRTKRRVDELSEALNLRGYAAEGIHGDLTQAKRMSVLRKFKEGSIEVL 294
Query: 430 VS 431
V+
Sbjct: 295 VA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
Score = 41 (19.5 bits), Expect = 6.0e-42, Sum P(2) = 6.0e-42
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + +Q +R VL +F+ G +LV+
Sbjct: 271 HGDLTQAKRMSVLRKFKEGSIEVLVA 296
>CGD|CAL0000056 [details] [associations]
symbol:orf19.7546 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14777 EMBL:AR550432 RefSeq:XP_719308.1
ProteinModelPortal:Q5ACU6 SMR:Q5ACU6 STRING:Q5ACU6 GeneID:3639008
KEGG:cal:CaO19.7546 Uniprot:Q5ACU6
Length = 539
Score = 429 (156.1 bits), Expect = 6.4e-42, Sum P(2) = 6.4e-42
Identities = 108/304 (35%), Positives = 168/304 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F+E N P +++ I M F PT IQ++ P AL G D++ +A+TGSGKT + P +
Sbjct: 125 FKELNLVPDLLESIESMKFTKPTPIQSEAIPHALEGKDIIGLAQTGSGKTAAFAIPILQS 184
Query: 190 V-NSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKAL 248
+ ++Q+P LVLAPTREL QI+ + GS+ R +C+ GG Q + L
Sbjct: 185 LWHAQQPY------FALVLAPTRELTFQIKDTFDALGSSMGLRSSCIVGGMDMMDQARDL 238
Query: 249 QTGAEIVIATPGRLIDYLEQGT-INLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDR 307
+++ATPGR++D+LE +L YLV+DEADR+LDM F P + KI+ I R
Sbjct: 239 MRKPHVIVATPGRIMDHLEHTKGFSLKNLKYLVMDEADRLLDMDFGPALDKILKVIPIKR 298
Query: 308 QVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLL 367
++SAT +++KL L + V++ + S TA+ N+VQ + + + K+ L LL
Sbjct: 299 TTYLFSATMTNKIEKLQRASLHNPVRVAVSSKYQTAD-NLVQSMMLVNDGYKNTILIHLL 357
Query: 368 SQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
++ + I+F T A R G+ AV +HG SQ +R LN+F+ +A+
Sbjct: 358 NEFMGK---SIIVFTRTVAHAQRTALLARILGFNAVPLHGQLSQSQRLGSLNKFKSNQAN 414
Query: 428 ILVS 431
ILV+
Sbjct: 415 ILVA 418
Score = 44 (20.5 bits), Expect = 6.4e-42, Sum P(2) = 6.4e-42
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 436 SQQERDRVLNEFRIGRASILVS 457
SQ +R LN+F+ +A+ILV+
Sbjct: 397 SQSQRLGSLNKFKSNQANILVA 418
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 449 (163.1 bits), Expect = 7.2e-42, P = 7.2e-42
Identities = 105/304 (34%), Positives = 169/304 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + +++ + ++G+Q PT IQ Q P+ L G DL+A A+TG+GKT ++ P +
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+ + R + L+L PTRELA Q+ +G T + VFGG + Q + L
Sbjct: 63 LRQGQTQRK-KRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G ++++ATPGRL+D Q + +VLDEADRMLDMGF I KII + + Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ-IVDVCQEHEKDYKLQGLLS 368
L++SAT ++V++LA+ + D +++I + N + NI Q ++ V +KD K LLS
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAA-NQASKSNISQWLITV----DKDTK-SALLS 235
Query: 369 Q-IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
I ++ + +IF+ETK A + + +G A A H +SQ R ++L +F+ G+
Sbjct: 236 HLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIK 295
Query: 428 ILVS 431
LV+
Sbjct: 296 YLVA 299
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 449 (163.1 bits), Expect = 7.2e-42, P = 7.2e-42
Identities = 105/304 (34%), Positives = 169/304 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + +++ + ++G+Q PT IQ Q P+ L G DL+A A+TG+GKT ++ P +
Sbjct: 3 FSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEK 62
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+ + R + L+L PTRELA Q+ +G T + VFGG + Q + L
Sbjct: 63 LRQGQTQRK-KRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLI 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G ++++ATPGRL+D Q + +VLDEADRMLDMGF I KII + + Q
Sbjct: 122 DGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQF 181
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ-IVDVCQEHEKDYKLQGLLS 368
L++SAT ++V++LA+ + D +++I + N + NI Q ++ V +KD K LLS
Sbjct: 182 LLFSATLSRKVRELAKTAVRDPHEISIAA-NQASKSNISQWLITV----DKDTK-SALLS 235
Query: 369 Q-IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRAS 427
I ++ + +IF+ETK A + + +G A A H +SQ R ++L +F+ G+
Sbjct: 236 HLINEQQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIK 295
Query: 428 ILVS 431
LV+
Sbjct: 296 YLVA 299
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 448 (162.8 bits), Expect = 9.2e-42, P = 9.2e-42
Identities = 104/294 (35%), Positives = 166/294 (56%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHVNSQRPLRS 198
+++ + +G+ T IQA P+ L+G D++A AKTGSGKT + + +++ R
Sbjct: 15 MLRNLASLGYAEMTPIQAHSLPLILAGKDVIARAKTGSGKTAAFGIGLLSRLDALS-FRV 73
Query: 199 GEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGGAPKGPQVKALQTGAEIVIA 257
LVL PTRELA Q+ T ++ + GG P GPQ+ +L+ GA +VI
Sbjct: 74 Q----ALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQLGSLEHGAHVVIG 129
Query: 258 TPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWP 317
TPGRL+D+L +G+++L LVLDEADRMLDMGF+ I +I P RQ L++SAT+P
Sbjct: 130 TPGRLLDHLRRGSLDLSALRTLVLDEADRMLDMGFQDDISALIAAAPPKRQTLLFSATYP 189
Query: 318 KEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSK 377
+ ++ + V++++ + H I V E + +++ + +G R
Sbjct: 190 DSIAAMSAGVQREPVEVSVDEV-----HGEGAIEQVFYEVDSGQRIEAVERILGHYRPES 244
Query: 378 TIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+IF TK + ++ ++ +G+AA+AIHG+ Q+ERDRVL F AS+LV+
Sbjct: 245 ALIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVA 298
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 374 (136.7 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 84/187 (44%), Positives = 112/187 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP PI+ +EE N ++K I + ++ PT IQ Q PIAL DL+ IA+TGSGKT
Sbjct: 690 GGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKT 749
Query: 180 LGYIAPAIVHVNSQRPLR---SGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVF 236
++ P + +V PL S +GP LV+AP+RELA QI N F S + R V
Sbjct: 750 AAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVV 809
Query: 237 GGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQI 296
GG Q L+ G EIVI TPGRL D LE+ L++ +Y++LDEADRM+DMGFE +
Sbjct: 810 GGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGFEDTV 869
Query: 297 RKIIGQI 303
I+ +I
Sbjct: 870 HYILDKI 876
Score = 153 (58.9 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 42/126 (33%), Positives = 69/126 (54%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTAN-HNIVQIVDVCQEHEKDYKLQG 365
R M+SAT P V++L+ +L ++IG +P A +I Q ++ E +K KLQ
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIG--DPGAGKRSIEQKLEFLTEGKKKQKLQE 961
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
+L I+FV K+ AD I++S+ + AVA+HG K+Q+ R++ L+ F+
Sbjct: 962 ILEMY----EPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAE 1017
Query: 426 ASILVS 431
ILV+
Sbjct: 1018 FDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 38 (18.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K+Q+ R++ L+ F+ ILV+
Sbjct: 1001 KAQEIREQTLSAFKNAEFDILVA 1023
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 374 (136.7 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 84/187 (44%), Positives = 112/187 (59%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G VP PI+ +EE N ++K I + ++ PT IQ Q PIAL DL+ IA+TGSGKT
Sbjct: 690 GGVVPPPIRKWEESNLSNDLLKAIKKAKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKT 749
Query: 180 LGYIAPAIVHVNSQRPLR---SGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVF 236
++ P + +V PL S +GP LV+AP+RELA QI N F S + R V
Sbjct: 750 AAFVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVV 809
Query: 237 GGAPKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQI 296
GG Q L+ G EIVI TPGRL D LE+ L++ +Y++LDEADRM+DMGFE +
Sbjct: 810 GGRNAEAQAFELRRGVEIVIGTPGRLQDCLEKAYTVLNQCNYVILDEADRMMDMGFEDTV 869
Query: 297 RKIIGQI 303
I+ +I
Sbjct: 870 HYILDKI 876
Score = 153 (58.9 bits), Expect = 1.0e-41, Sum P(2) = 1.0e-41
Identities = 42/126 (33%), Positives = 69/126 (54%)
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTAN-HNIVQIVDVCQEHEKDYKLQG 365
R M+SAT P V++L+ +L ++IG +P A +I Q ++ E +K KLQ
Sbjct: 904 RLTQMFSATMPPSVERLSRKYLRAPAYISIG--DPGAGKRSIEQKLEFLTEGKKKQKLQE 961
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
+L I+FV K+ AD I++S+ + AVA+HG K+Q+ R++ L+ F+
Sbjct: 962 ILEMY----EPPIIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAE 1017
Query: 426 ASILVS 431
ILV+
Sbjct: 1018 FDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVS 509
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 43 (20.2 bits), Expect = 3.5e-30, Sum P(2) = 3.5e-30
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H K+Q+ R++ L+ F+ ILV+
Sbjct: 998 HGGKAQEIREQTLSAFKNAEFDILVA 1023
Score = 38 (18.4 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 435 KSQQERDRVLNEFRIGRASILVS 457
K+Q+ R++ L+ F+ ILV+
Sbjct: 1001 KAQEIREQTLSAFKNAEFDILVA 1023
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 411 (149.7 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 102/310 (32%), Positives = 168/310 (54%)
Query: 126 PIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQG-WPIALSGCDLVAIAKTGSGKTLGYIA 184
PI F + +++ +YE GF+ P+AIQ + PI L G D++A A++G+GKT IA
Sbjct: 33 PITSFNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPI-LQGRDVIAQAQSGTGKT-SMIA 90
Query: 185 PAIVHV--NSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFG-SATATRVACVFGGAPK 241
++ V S R +++ L+L+PTRELA Q E G A AC+ GG
Sbjct: 91 LSVCQVVDTSSREVQA------LILSPTRELATQTEKTIQAIGLHANIQAHACI-GGNSV 143
Query: 242 GPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIG 301
G ++ L+ G +V TPGR+ D +++ ++ L+LDE+D ML GF+ QI +
Sbjct: 144 GEDIRKLEHGVHVVSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYR 203
Query: 302 QIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDY 361
+ PD QV + SAT P E+ ++ F+ + V++ + T I Q V E E ++
Sbjct: 204 YLPPDLQVCLVSATLPHEILEMTSKFMTEPVKILVKRDELTLE-GIKQFF-VAVEKE-EW 260
Query: 362 KLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEF 421
K L + ++ +IF TKRK D ++ +R+ + ++HG+ Q+ERD ++NEF
Sbjct: 261 KFDTLCDLYDTLTITQAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEF 320
Query: 422 RIGRASILVS 431
R G + +L++
Sbjct: 321 RSGDSRVLIT 330
Score = 61 (26.5 bits), Expect = 1.1e-41, Sum P(2) = 1.1e-41
Identities = 10/21 (47%), Positives = 17/21 (80%)
Query: 437 QQERDRVLNEFRIGRASILVS 457
Q+ERD ++NEFR G + +L++
Sbjct: 310 QKERDAIMNEFRSGDSRVLIT 330
>SGD|S000000441 [details] [associations]
symbol:PRP5 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000348 "mRNA branch
site recognition" evidence=TAS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000000441 GO:GO:0005524
GO:GO:0005681 EMBL:BK006936 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008186
GeneTree:ENSGT00610000086076 KO:K12811 HOGENOM:HOG000007229
GO:GO:0000348 OMA:SLVIIYN OrthoDB:EOG40CMR1 EMBL:M33191 EMBL:Z36106
EMBL:AY692817 PIR:A35791 RefSeq:NP_009796.1
ProteinModelPortal:P21372 SMR:P21372 DIP:DIP-88N IntAct:P21372
MINT:MINT-403988 STRING:P21372 PaxDb:P21372 EnsemblFungi:YBR237W
GeneID:852539 KEGG:sce:YBR237W CYGD:YBR237w NextBio:971604
Genevestigator:P21372 GermOnline:YBR237W Uniprot:P21372
Length = 849
Score = 473 (171.6 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 136/391 (34%), Positives = 201/391 (51%)
Query: 73 MEQINKNLYTPNHLTVSRSQGEVESY-LNHHDVTVKGRYYLLRLESRPGKCVPRPIQHFE 131
+E KN Y + S S+ EVE L+ ++ +KG G C P+P+ +
Sbjct: 211 LEPFQKNFYIESETVSSMSEMEVEELRLSLDNIKIKGT----------G-C-PKPVTKWS 258
Query: 132 ECNFPPYIMKKIYE-MGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHV 190
+ M I E + F + T IQ+Q P +SG D++ I+KTGSGKT+ Y+ P + V
Sbjct: 259 QLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQV 318
Query: 191 NSQRPLRSGE-GPIVLVLAPTRELAQQIETVANDFGSA-TATRVACVFGGAPKGPQVKAL 248
+QRPL E GP+ L+LAPTRELA QI F A T+ R C GG+ Q+ L
Sbjct: 319 KAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDL 378
Query: 249 QTGAEIVIATPGRLIDYL--EQGTI-NLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRP 305
+ G EIV+ATPGR ID L G + + R +++V+DEADR+ D+GFEPQI +I+ +RP
Sbjct: 379 KRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRP 438
Query: 306 DRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQG 365
D+Q +++SAT+P +++ A L + + I S N N+ Q +C H +D K
Sbjct: 439 DKQCVLFSATFPNKLRSFAVRVLHSPISITINSKG-MVNENVKQKFRIC--HSEDEKFDN 495
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
L+ Q+ ER+ F E + + D + V A AI SQ D + +
Sbjct: 496 LV-QLIHERSE---FFDEVQSENDGQSSDVEEVD--AKAIIFVSSQNICDFISKKLLNAG 549
Query: 426 ASILVSQYNKSQQERDRVLNEFRIGRASILV 456
K QER L +F+ + SIL+
Sbjct: 550 IVTCAIHAGKPYQERLMNLEKFKREKNSILL 580
Score = 37 (18.1 bits), Expect = 1.2e-41, Sum P(2) = 1.2e-41
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILV 508
H K QER L +F+ + SIL+
Sbjct: 556 HAGKPYQERLMNLEKFKREKNSILL 580
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 453 (164.5 bits), Expect = 2.1e-41, P = 2.1e-41
Identities = 112/314 (35%), Positives = 171/314 (54%)
Query: 120 GKCVPRPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKT 179
G+ V RPI FE C FP + + G++ PT IQ Q P+ L G D++A A TGSGKT
Sbjct: 196 GQDVTRPIIDFEHCGFPEALNHNLKTSGYEVPTPIQMQMIPVGLLGRDVLASADTGSGKT 255
Query: 180 LGYIAPAIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATAT-RVACVFGG 238
++ P I R L + P L+L PTRELA QIE A + S + + GG
Sbjct: 256 AAFLLPVIT-----RALCESKTPSALILTPTRELAIQIENQAKELMSGLPRMKTVLLVGG 310
Query: 239 APKGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRK 298
P PQ+ L+ +++IATPGRL+D ++Q ++ L +V+DEAD ML MGF+ Q+
Sbjct: 311 LPLPPQLYRLRQHVKVIIATPGRLLDIIKQSSVELCGIKIVVVDEADTMLKMGFQQQVLD 370
Query: 299 IIGQIRPDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHE 358
I+ + D Q ++ SAT P +++LA L + V++ G N + ++ QI+ +E
Sbjct: 371 ILEHVPNDSQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCS-SVRQIILWVEEPA 429
Query: 359 KDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRN-KGWAAVAIHGNKSQQERDRV 417
K KL +L+ + ++FV+ K AD ++ +V+ G +V+IH KSQ ER +
Sbjct: 430 KKKKLFEILNDKKLFKPP-VLVFVDCKLGADLLSEAVQKITGLKSVSIHSEKSQTERKNI 488
Query: 418 LNEFRIGRASILVS 431
L G ++VS
Sbjct: 489 LKGLLEGDYEVVVS 502
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 443 (161.0 bits), Expect = 3.3e-41, P = 3.3e-41
Identities = 99/302 (32%), Positives = 165/302 (54%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F++ + K I MGF+ T IQAQ P+ L+ D++ A+TG+GKT + P +
Sbjct: 5 FQDFQLSSDLTKAIKRMGFEEATPIQAQTIPLGLANKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+N + P +V+APTRELA Q+ G RV ++GG G Q++AL+
Sbjct: 65 INPESPNIQA-----IVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQIRALK 119
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
I++ TPGRL+D++ + T+ L + +VLDEAD ML+MGF I I+ + + Q
Sbjct: 120 KNPHIIVGTPGRLLDHINRRTMRLQTVNTVVLDEADEMLNMGFIEDIESILSNVPAEHQT 179
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQ 369
L++SAT P ++++AE F+ + + + + T + NI Q + HE+ K L
Sbjct: 180 LLFSATMPAPIKRIAERFMTNPEHVKVKAKEMTVS-NIQQFY--LEVHERK-KFDTLTRL 235
Query: 370 IGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASIL 429
+ + I+F TKR+ D++T ++ +G+ A IHG+ +Q +R L +F+ G +L
Sbjct: 236 LDIQSPELAIVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVL 295
Query: 430 VS 431
V+
Sbjct: 296 VA 297
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 391 (142.7 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 96/306 (31%), Positives = 170/306 (55%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
FE N +++ IY GF+AP++IQ++ +SG D++A A++G+GKT + +
Sbjct: 25 FESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQA 84
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
++ LR + L+L+PTRELA QI V + G + GG +K +Q
Sbjct: 85 ID----LRKKDLQ-ALILSPTRELASQIGQVVKNLGDYMNVNAFAITGGKTLKDDLKKMQ 139
Query: 250 T-GAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD--MGFEPQIRKIIGQIRPD 306
G + V TPGR++D +++ + LVLDEAD +L +GF+ QI I ++ +
Sbjct: 140 KHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKN 199
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQ-IVDVCQEHEKDYKLQG 365
QV++ SAT K++ ++ F+ D V++ + + + I Q +V+V +E ++K
Sbjct: 200 CQVVVVSATMNKDILEVTRKFMNDPVKILV-KRDEISLEGIKQYVVNVDKE---EWKFDT 255
Query: 366 LLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGR 425
L S ++ +IF TK+K D +++ + +A V++HG+ Q+ERD+V+N+FR G
Sbjct: 256 LCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGH 315
Query: 426 ASILVS 431
+ +L+S
Sbjct: 316 SRVLIS 321
Score = 76 (31.8 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 479 SILVSHYNKSQQERDRVLNEFRIGRASILVS 509
+++ H + Q+ERD+V+N+FR G + +L+S
Sbjct: 291 AVVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 76 (31.8 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 505 SILVSHYNKSQQERDRVLNEFRIGRASILVS 535
+++ H + Q+ERD+V+N+FR G + +L+S
Sbjct: 291 AVVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 76 (31.8 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 531 SILVSHYNKSQQERDRVLNEFRIGRASILVS 561
+++ H + Q+ERD+V+N+FR G + +L+S
Sbjct: 291 AVVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 76 (31.8 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVS 587
+++ H + Q+ERD+V+N+FR G + +L+S
Sbjct: 291 AVVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 76 (31.8 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 583 SILVSHYNKSQQERDRVLNEFRIGRASILVS 613
+++ H + Q+ERD+V+N+FR G + +L+S
Sbjct: 291 AVVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 76 (31.8 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 609 SILVSHYNKSQQERDRVLNEFRIGRASILVS 639
+++ H + Q+ERD+V+N+FR G + +L+S
Sbjct: 291 AVVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 76 (31.8 bits), Expect = 4.9e-41, Sum P(2) = 4.9e-41
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVS 665
+++ H + Q+ERD+V+N+FR G + +L+S
Sbjct: 291 AVVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 71 (30.1 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 429 LVSQY-NKSQQERDRVLNEFRIGRASILVS 457
+VS + + Q+ERD+V+N+FR G + +L+S
Sbjct: 292 VVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
Score = 67 (28.6 bits), Expect = 4.3e-40, Sum P(2) = 4.3e-40
Identities = 12/30 (40%), Positives = 23/30 (76%)
Query: 455 LVSQYKE-SQQKRDRVLNEFRIGRASILVS 483
+VS + + Q++RD+V+N+FR G + +L+S
Sbjct: 292 VVSMHGDMKQEERDKVMNDFRTGHSRVLIS 321
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 451 (163.8 bits), Expect = 5.6e-41, P = 5.6e-41
Identities = 104/298 (34%), Positives = 165/298 (55%)
Query: 139 IMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVHV--NS--QR 194
+++ I G+ PT +Q + P L G DL+ A+TG+GKT G+ P + + N +
Sbjct: 12 LVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILERLFPNGVPDK 71
Query: 195 PLRSG-EGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQTGAE 253
R G P VLVL PTRELA Q+ + AC+FGG PQV+A+ G +
Sbjct: 72 SQRHGPRQPRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNPQVQAMSRGVD 131
Query: 254 IVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQVLMWS 313
+++A PGRL+D QG+++L LVLDEADRMLDMGF ++K++ ++ RQ L++S
Sbjct: 132 VLVACPGRLLDLAGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARLPAKRQNLLFS 191
Query: 314 ATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLSQIGSE 373
AT+ ++ LA L + ++ + N T ++ + H++ L L++ +G+
Sbjct: 192 ATFSNDITSLAGKLLHNPERIEVTPPNTTVERIEQRVFRLAANHKRSL-LAHLIT-VGA- 248
Query: 374 RTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASILVS 431
+ ++F TK A+ + + G AAVAIHGNKSQ R + L +F+ G I+V+
Sbjct: 249 -WEQVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIMVA 305
>TIGR_CMR|SPO_1443 [details] [associations]
symbol:SPO_1443 "ATP-dependent RNA helicase RhlE"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_166684.1
ProteinModelPortal:Q5LTH1 GeneID:3193638 KEGG:sil:SPO1443
PATRIC:23376201 OMA:VPTHAED ProtClustDB:CLSK933557 Uniprot:Q5LTH1
Length = 471
Score = 439 (159.6 bits), Expect = 9.1e-41, P = 9.1e-41
Identities = 109/309 (35%), Positives = 162/309 (52%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F E N P ++K I E G++ PT IQA P AL G D++ IA+TG+GKT + P I
Sbjct: 4 FSELNLNPKVLKAIEEAGYETPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPMITL 63
Query: 190 VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKALQ 249
+ R P LVL PTRELA Q+ + + A + GG Q +
Sbjct: 64 LARGRA--RARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDALID 121
Query: 250 TGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQV 309
G +++IATPGRL+D+ E+G + L +V+DEADRMLDMGF P I +I RQ
Sbjct: 122 RGVDVLIATPGRLLDHFERGKLLLTGVQIMVVDEADRMLDMGFIPDIERIFSLTPFTRQT 181
Query: 310 LMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYK------- 362
L +SAT E++++ FL ++ + TA+ I Q V + + +D +
Sbjct: 182 LFFSATMAPEIERITNTFLSAPARIEVAR-QATASETIEQGVVLFKGSRRDREASEKRAV 240
Query: 363 LQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFR 422
L+ L+ G E+ + IIF K D + +S++ G+ A IHG+ Q +R R L+ FR
Sbjct: 241 LRALIDAEG-EKCTNAIIFCNRKTDVDIVAKSLQKYGYDAAPIHGDLDQSQRTRTLDGFR 299
Query: 423 IGRASILVS 431
G+ +LV+
Sbjct: 300 EGKLRLLVA 308
>UNIPROTKB|J3KT12 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC016876 HGNC:HGNC:3282 ChiTaRS:EIF4A1
ProteinModelPortal:J3KT12 Ensembl:ENST00000582746 Uniprot:J3KT12
Length = 341
Score = 397 (144.8 bits), Expect = 9.2e-41, Sum P(2) = 9.2e-41
Identities = 99/307 (32%), Positives = 169/307 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F++ N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQV 245
+ + + L++ + LVLAPTRELAQQI+ V G A+ AC+ GG +V
Sbjct: 91 LQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGTNVRAEV 144
Query: 246 KALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ LQ A I++ TPGR+ D L + ++ VLDEAD ML GF+ QI I ++
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 204
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
+ QV++ SAT P +V ++ + F+ D +++ + T I Q + E E ++KL
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE-GIRQFY-INVERE-EWKLD 261
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF+ T+RK D +T + + + A+HG+ Q+ERD ++ EFR G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321
Query: 425 RASILVS 431
+ +L++
Sbjct: 322 SSRVLIT 328
Score = 67 (28.6 bits), Expect = 9.2e-41, Sum P(2) = 9.2e-41
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVSDFDILRQ--WRIAW 677
++ H + Q+ERD ++ EFR G + +L++ D+L + W + W
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLITT-DLLNRSRWTV-W 340
Score = 60 (26.2 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 505 SILVSHYNKSQQERDRVLNEFRIGRASILVS 535
++ H + Q+ERD ++ EFR G + +L++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Score = 60 (26.2 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 531 SILVSHYNKSQQERDRVLNEFRIGRASILVS 561
++ H + Q+ERD ++ EFR G + +L++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Score = 60 (26.2 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVS 587
++ H + Q+ERD ++ EFR G + +L++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Score = 60 (26.2 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 583 SILVSHYNKSQQERDRVLNEFRIGRASILVS 613
++ H + Q+ERD ++ EFR G + +L++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Score = 60 (26.2 bits), Expect = 5.0e-40, Sum P(2) = 5.0e-40
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 609 SILVSHYNKSQQERDRVLNEFRIGRASILVS 639
++ H + Q+ERD ++ EFR G + +L++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT 328
Score = 54 (24.1 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 437 QQERDRVLNEFRIGRASILVS 457
Q+ERD ++ EFR G + +L++
Sbjct: 308 QKERDVIMREFRSGSSRVLIT 328
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 402 (146.6 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 101/307 (32%), Positives = 166/307 (54%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQG-WPIALSGCDLVAIAKTGSGKTLGYIAP 185
I F++ N P +++ IY GF+ P+AIQ + PI L D++A A++G+GKT +
Sbjct: 18 IDTFDDMNLKPELLRGIYAYGFERPSAIQQRAIMPI-LGERDVLAQAQSGTGKTATFSIS 76
Query: 186 AIVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRV-ACVFGGAPKGPQ 244
+ +++ L+ + L+LAPTRELAQQI+ V G AC+ GG
Sbjct: 77 VLQKIDTS--LKQCQA---LILAPTRELAQQIQKVVVALGDLMNVECHACI-GGTLVRDD 130
Query: 245 VKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ ALQ G +V+ TPGR+ D +++ + VLDEAD ML GF+ QI I +
Sbjct: 131 MAALQAGVHVVVGTPGRVHDMIQRRALPTDAVQMFVLDEADEMLSRGFKDQIYDIFQLLP 190
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
P QV++ SAT P++V ++ F+ D +++ + T I Q V E E ++KL
Sbjct: 191 PTAQVVLLSATMPQDVLEVTTKFMRDPIRILVKKDELTLE-GIKQFY-VAVEKE-EWKLD 247
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF T+RK D +T + + + ++HG+ Q +RD +++EFR G
Sbjct: 248 TLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTG 307
Query: 425 RASILVS 431
+ IL++
Sbjct: 308 SSRILIT 314
Score = 60 (26.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 19/96 (19%), Positives = 43/96 (44%)
Query: 484 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 543
H + Q +RD +++EFR G + IL++ D + + + S+++++ + +E
Sbjct: 289 HGDMDQAQRDTLMHEFRTGSSRILIT--------TDLLARGIDVQQVSLVINYDLPANRE 340
Query: 544 R--DRVLNEFRIGRASILVSHYNKSQQERDRVLNEF 577
R+ R GR + ++ R + +F
Sbjct: 341 NYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQF 376
Score = 60 (26.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 19/96 (19%), Positives = 43/96 (44%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 569
H + Q +RD +++EFR G + IL++ D + + + S+++++ + +E
Sbjct: 289 HGDMDQAQRDTLMHEFRTGSSRILIT--------TDLLARGIDVQQVSLVINYDLPANRE 340
Query: 570 R--DRVLNEFRIGRASILVSHYNKSQQERDRVLNEF 603
R+ R GR + ++ R + +F
Sbjct: 341 NYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQF 376
Score = 60 (26.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 19/96 (19%), Positives = 43/96 (44%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 595
H + Q +RD +++EFR G + IL++ D + + + S+++++ + +E
Sbjct: 289 HGDMDQAQRDTLMHEFRTGSSRILIT--------TDLLARGIDVQQVSLVINYDLPANRE 340
Query: 596 R--DRVLNEFRIGRASILVSHYNKSQQERDRVLNEF 629
R+ R GR + ++ R + +F
Sbjct: 341 NYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQF 376
Score = 60 (26.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 19/96 (19%), Positives = 43/96 (44%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 621
H + Q +RD +++EFR G + IL++ D + + + S+++++ + +E
Sbjct: 289 HGDMDQAQRDTLMHEFRTGSSRILIT--------TDLLARGIDVQQVSLVINYDLPANRE 340
Query: 622 R--DRVLNEFRIGRASILVSHYNKSQQERDRVLNEF 655
R+ R GR + ++ R + +F
Sbjct: 341 NYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQF 376
Score = 59 (25.8 bits), Expect = 1.8e-40, Sum P(2) = 1.8e-40
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVSDFDIL 670
H + Q +RD +++EFR G + IL++ D+L
Sbjct: 289 HGDMDQAQRDTLMHEFRTGSSRILITT-DLL 318
Score = 55 (24.4 bits), Expect = 4.7e-40, Sum P(2) = 4.7e-40
Identities = 18/91 (19%), Positives = 41/91 (45%)
Query: 437 QQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQQER--DR 494
Q +RD +++EFR G + IL++ D + + + S+++++ + +E R
Sbjct: 294 QAQRDTLMHEFRTGSSRILITT--------DLLARGIDVQQVSLVINYDLPANRENYIHR 345
Query: 495 VLNEFRIGRASILVSHYNKSQQERDRVLNEF 525
+ R GR + ++ R + +F
Sbjct: 346 IGRGGRFGRKGVSINFVTNDDVRMMREIEQF 376
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 401 (146.2 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 101/307 (32%), Positives = 168/307 (54%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F++ N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 31 VDSFDDMNLREALLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQV 245
+ ++ + L++ + +VLAPTRELAQQI+ V G AT AC+ GG V
Sbjct: 91 LQQIDVE--LKATQA---MVLAPTRELAQQIQKVVLALGDYMGATCHACI-GGTNVRNDV 144
Query: 246 KALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ LQ IV+ TPGR+ D L + ++ LDEAD ML GF+ QI +I ++
Sbjct: 145 QKLQADVPHIVVGTPGRVFDMLNRRYLSPKYIKMFALDEADEMLSRGFKDQIYEIFQKLA 204
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
D QV++ SAT P+EV ++ F+ D V++ + T I Q + E E ++KL
Sbjct: 205 TDTQVILLSATMPQEVLEVTTKFMRDPVRILVKKEELTLE-GIRQFY-INVEKE-EWKLD 261
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF+ T+RK D +T + + + A+HG+ Q+ERD ++ EFR G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSG 321
Query: 425 RASILVS 431
+ +L++
Sbjct: 322 SSRVLIT 328
Score = 61 (26.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVSDFDIL 670
H + Q+ERD ++ EFR G + +L++ D+L
Sbjct: 303 HGDMEQKERDVIMKEFRSGSSRVLITT-DLL 332
Score = 61 (26.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 19/96 (19%), Positives = 44/96 (45%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQE 621
H + Q+ERD ++ EFR G + +L++ D + + + S+++++ + +E
Sbjct: 303 HGDMEQKERDVIMKEFRSGSSRVLIT--------TDLLARGIDVQQVSLVINYDLPTNRE 354
Query: 622 R--DRVLNEFRIGRASILVSHYNKSQQERDRVLNEF 655
R+ R GR + ++ + + R + F
Sbjct: 355 NYIHRIGRGGRFGRKGVAINMITEDDKRTLRDIETF 390
Score = 56 (24.8 bits), Expect = 4.8e-40, Sum P(2) = 4.8e-40
Identities = 18/91 (19%), Positives = 42/91 (46%)
Query: 437 QQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQQER--DR 494
Q+ERD ++ EFR G + +L++ D + + + S+++++ + +E R
Sbjct: 308 QKERDVIMKEFRSGSSRVLITT--------DLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 495 VLNEFRIGRASILVSHYNKSQQERDRVLNEF 525
+ R GR + ++ + + R + F
Sbjct: 360 IGRGGRFGRKGVAINMITEDDKRTLRDIETF 390
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 101/303 (33%), Positives = 161/303 (53%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++ + E+G+Q PT IQ + P L+ D++A A+TG+GKT + P +
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQL 62
Query: 190 VNSQRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKAL 248
+ + I LVL PTRELA Q++ + T RV +GG Q
Sbjct: 63 LMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVF 122
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
G +++IATPGRL+D+L QG +NL++ + LV DEADRMLDMGF +I+ ++ Q+ RQ
Sbjct: 123 NAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQ 182
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS 368
L++SAT + +++ L D ++ + N TA QI + D K + +
Sbjct: 183 TLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTA----AQIEQRVYAIDSDRKTEFVSH 238
Query: 369 QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
+ S+ + +IF TK+ D +T + G A + HG+ SQ R++VL EF+ G +
Sbjct: 239 LVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQV 298
Query: 429 LVS 431
LV+
Sbjct: 299 LVA 301
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 437 (158.9 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 101/303 (33%), Positives = 161/303 (53%)
Query: 130 FEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPAIVH 189
F + ++ + E+G+Q PT IQ + P L+ D++A A+TG+GKT + P +
Sbjct: 3 FSALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQL 62
Query: 190 VNSQRPLRSGEGPI-VLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVKAL 248
+ + I LVL PTRELA Q++ + T RV +GG Q
Sbjct: 63 LMADNQSDHAAKAIRALVLVPTRELALQVQQSFVKYAKGTDIRVGIAYGGVSIEAQQAVF 122
Query: 249 QTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPDRQ 308
G +++IATPGRL+D+L QG +NL++ + LV DEADRMLDMGF +I+ ++ Q+ RQ
Sbjct: 123 NAGIDVLIATPGRLLDHLRQGALNLNQLNTLVFDEADRMLDMGFMDEIQAVLKQVPAQRQ 182
Query: 309 VLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGLLS 368
L++SAT + +++ L D ++ + N TA QI + D K + +
Sbjct: 183 TLLFSATLDDSIFSFSKNLLRDPKRIEVAKPNTTA----AQIEQRVYAIDSDRKTEFVSH 238
Query: 369 QIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRASI 428
+ S+ + +IF TK+ D +T + G A + HG+ SQ R++VL EF+ G +
Sbjct: 239 LVRSKNWQQVLIFSRTKQGVDKLTAQLNKLGVATQSFHGDLSQGAREKVLQEFKQGLVQV 298
Query: 429 LVS 431
LV+
Sbjct: 299 LVA 301
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 449 (163.1 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 114/326 (34%), Positives = 169/326 (51%)
Query: 125 RPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIA 184
+P + F E N + K + G+ T IQ P+ G D++A A+TGSGKT ++
Sbjct: 338 KPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLL 397
Query: 185 PAIVHVNSQRPLRS-GEG---PIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAP 240
P + + L + GEG P ++L PTRELA QI F T + V+GG
Sbjct: 398 PIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLA 457
Query: 241 KGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD-MGFEPQIRKI 299
G ++ GA I++ T GR+ + E+GTI L + + VLDEADRM+D MGF I I
Sbjct: 458 VGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
Query: 300 IGQI----RPDRQVLMWSATWPKEVQKLAEDFLVD-YVQLNIGSLNPTANHNIVQIVDVC 354
+ + +RQ LM+SAT+P VQ+ A FL + YV + I + AN ++Q + C
Sbjct: 518 VNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIG-AANKCVLQEFERC 576
Query: 355 QEHEKDYKLQGLLS-QIGS---ER-----TSKTIIFVETKRKADDITRSVRNKGWAAVAI 405
+ EK KL LL I S E+ T KT++FV + AD + + + A+ I
Sbjct: 577 ERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITI 636
Query: 406 HGNKSQQERDRVLNEFRIGRASILVS 431
HG + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 449 (163.1 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 114/326 (34%), Positives = 169/326 (51%)
Query: 125 RPIQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIA 184
+P + F E N + K + G+ T IQ P+ G D++A A+TGSGKT ++
Sbjct: 338 KPCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLL 397
Query: 185 PAIVHVNSQRPLRS-GEG---PIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAP 240
P + + L + GEG P ++L PTRELA QI F T + V+GG
Sbjct: 398 PIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLA 457
Query: 241 KGPQVKALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLD-MGFEPQIRKI 299
G ++ GA I++ T GR+ + E+GTI L + + VLDEADRM+D MGF I I
Sbjct: 458 VGYNKGQIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETI 517
Query: 300 IGQI----RPDRQVLMWSATWPKEVQKLAEDFLVD-YVQLNIGSLNPTANHNIVQIVDVC 354
+ + +RQ LM+SAT+P VQ+ A FL + YV + I + AN ++Q + C
Sbjct: 518 VNYDSMPRKENRQTLMFSATFPDSVQEAARAFLRENYVMIAIDKIG-AANKCVLQEFERC 576
Query: 355 QEHEKDYKLQGLLS-QIGS---ER-----TSKTIIFVETKRKADDITRSVRNKGWAAVAI 405
+ EK KL LL I S E+ T KT++FV + AD + + + A+ I
Sbjct: 577 ERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLASILSSAQVPAITI 636
Query: 406 HGNKSQQERDRVLNEFRIGRASILVS 431
HG + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 510 HYNKSQQERDRVLNEFRIGRASILVS 535
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 536 HYNKSQQERDRVLNEFRIGRASILVS 561
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 562 HYNKSQQERDRVLNEFRIGRASILVS 587
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 588 HYNKSQQERDRVLNEFRIGRASILVS 613
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 614 HYNKSQQERDRVLNEFRIGRASILVS 639
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
Score = 49 (22.3 bits), Expect = 2.2e-40, Sum P(2) = 2.2e-40
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 640 HYNKSQQERDRVLNEFRIGRASILVS 665
H + Q+ER L +FR G +L++
Sbjct: 637 HGAREQRERSEALRQFRNGSKPVLIA 662
>DICTYBASE|DDB_G0293036 [details] [associations]
symbol:ddx5 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0293036 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000155_GR GO:GO:0000184
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 PROSITE:PS51195
EMBL:AAFI02000199 RefSeq:XP_629283.1 ProteinModelPortal:Q54CD6
EnsemblProtists:DDB0266367 GeneID:8629006 KEGG:ddi:DDB_G0293036
OMA:RISIMLL ProtClustDB:CLSZ2846571 Uniprot:Q54CD6
Length = 697
Score = 452 (164.2 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 111/329 (33%), Positives = 179/329 (54%)
Query: 119 PGKCVPRPIQHFEECNFPPYIMKKIYEMG-FQAPTAIQAQGWPIALSGCDLVAIAKTGSG 177
P C PI + E P +K ++ F PT Q WP L+G D++ + GSG
Sbjct: 197 PNNC-KIPIANTGESECLPNTLKLFFKKTQFPTPTLFQQYAWPAILTGHDIIGTSLPGSG 255
Query: 178 KTLGYIAPAIVH------------VNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFG 225
KTLGY+AP I H + ++ + G +VLVL PTREL Q+ +
Sbjct: 256 KTLGYLAPMIPHCLARVDRGGKNKITGEKAPKQYTGILVLVLVPTRELGLQVHSNTLIIT 315
Query: 226 SATATRVACVFGGAPKGPQVKALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEA 284
+ + ++GG K Q++ L+ +I+I+TPGRLI+ +E G ++L + LVLDEA
Sbjct: 316 QLFGIKTSVIYGGISKNLQIEQLEKEKPQILISTPGRLIEMIENGHVDLSSVTMLVLDEA 375
Query: 285 DRMLDMGFEPQIRKIIGQIRPDRQVLMWSATWPKEVQKLAEDFLVD-YVQLNIGSLN-PT 342
D+ML G PQ+++I GQIRPD Q +++SAT+P ++++++D++ D ++L IGS P
Sbjct: 376 DKMLSKGLIPQLKQIRGQIRPDSQNILFSATFPDSLKEVSKDWIKDPSIRLRIGSSELPK 435
Query: 343 ANHNIVQIVDVCQEHEKDYKLQGLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAA 402
NH I Q + H+K L LLS+ + KTI+F ++ I+ +
Sbjct: 436 LNH-IQQDAQLIAHHKKPRALIKLLSEPQFKEKKKTIVFFNKIKELKRISIMLLKSNIKH 494
Query: 403 VAIHGNKSQQERDRVLNEFRIGRASILVS 431
I GN Q+ R++++N+F R+++L+S
Sbjct: 495 DTIFGNIDQELREKLINKFSSSRSTLLLS 523
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 399 (145.5 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 97/305 (31%), Positives = 159/305 (52%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
I F N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 25 IPTFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISI 84
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSATATRVACVFGGAPKGPQVK 246
+ +++ LR + VL L+PTRELA QI+ V G + GG G ++
Sbjct: 85 LQSLDTT--LRETQ---VLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIR 139
Query: 247 ALQTGAEIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIRPD 306
L G IV TPGR+ D +++ + LVLDEAD ML+ GF+ QI + + P
Sbjct: 140 KLDYGQHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPA 199
Query: 307 RQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQGL 366
QV++ SAT P E+ ++ F+ D +++ + T I Q V E E ++K L
Sbjct: 200 TQVVLISATLPHEILEMTSKFMTDPIRILVKRDELTLE-GIKQFF-VAVERE-EWKFDTL 256
Query: 367 LSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIGRA 426
+ ++ +IF TKRK D +T +R + ++HG+ Q+ERD ++ EFR G++
Sbjct: 257 CDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQS 316
Query: 427 SILVS 431
+L++
Sbjct: 317 RVLIT 321
Score = 60 (26.2 bits), Expect = 3.0e-40, Sum P(2) = 3.0e-40
Identities = 9/21 (42%), Positives = 17/21 (80%)
Query: 437 QQERDRVLNEFRIGRASILVS 457
Q+ERD ++ EFR G++ +L++
Sbjct: 301 QKERDEIMKEFRAGQSRVLIT 321
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 397 (144.8 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 99/307 (32%), Positives = 169/307 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F++ N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQV 245
+ + + L++ + LVLAPTRELAQQI+ V G A+ AC+ GG +V
Sbjct: 91 LQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGTNVRAEV 144
Query: 246 KALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ LQ A I++ TPGR+ D L + ++ VLDEAD ML GF+ QI I ++
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 204
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
+ QV++ SAT P +V ++ + F+ D +++ + T I Q + E E ++KL
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE-GIRQFY-INVERE-EWKLD 261
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF+ T+RK D +T + + + A+HG+ Q+ERD ++ EFR G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321
Query: 425 RASILVS 431
+ +L++
Sbjct: 322 SSRVLIT 328
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVSDFDIL 670
++ H + Q+ERD ++ EFR G + +L++ D+L
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLITT-DLL 332
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYN 616
++ H + Q+ERD ++ EFR G + +L++ D + + + S+++++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT--------TDLLARGIDVQQVSLVINYDL 349
Query: 617 KSQQER--DRVLNEFRIGRASILVSHYNKSQQERDRVLNE 654
+ +E R+ R GR + + N +E R L +
Sbjct: 350 PTNRENYIHRIGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
Score = 56 (24.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 437 QQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQQER--DR 494
Q+ERD ++ EFR G + +L++ D + + + S+++++ + +E R
Sbjct: 308 QKERDVIMREFRSGSSRVLITT--------DLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 495 VLNEFRIGRASILVSHYNKSQQERDRVLNE 524
+ R GR + + N +E R L +
Sbjct: 360 IGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 397 (144.8 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 99/307 (32%), Positives = 169/307 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F++ N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQV 245
+ + + L++ + LVLAPTRELAQQI+ V G A+ AC+ GG +V
Sbjct: 91 LQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGTNVRAEV 144
Query: 246 KALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ LQ A I++ TPGR+ D L + ++ VLDEAD ML GF+ QI I ++
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 204
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
+ QV++ SAT P +V ++ + F+ D +++ + T I Q + E E ++KL
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE-GIRQFY-INVERE-EWKLD 261
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF+ T+RK D +T + + + A+HG+ Q+ERD ++ EFR G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321
Query: 425 RASILVS 431
+ +L++
Sbjct: 322 SSRVLIT 328
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVSDFDIL 670
++ H + Q+ERD ++ EFR G + +L++ D+L
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLITT-DLL 332
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYN 616
++ H + Q+ERD ++ EFR G + +L++ D + + + S+++++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT--------TDLLARGIDVQQVSLVINYDL 349
Query: 617 KSQQER--DRVLNEFRIGRASILVSHYNKSQQERDRVLNE 654
+ +E R+ R GR + + N +E R L +
Sbjct: 350 PTNRENYIHRIGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
Score = 56 (24.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 437 QQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQQER--DR 494
Q+ERD ++ EFR G + +L++ D + + + S+++++ + +E R
Sbjct: 308 QKERDVIMREFRSGSSRVLITT--------DLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 495 VLNEFRIGRASILVSHYNKSQQERDRVLNE 524
+ R GR + + N +E R L +
Sbjct: 360 IGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 397 (144.8 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 99/307 (32%), Positives = 169/307 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F++ N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQV 245
+ + + L++ + LVLAPTRELAQQI+ V G A+ AC+ GG +V
Sbjct: 91 LQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGTNVRAEV 144
Query: 246 KALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ LQ A I++ TPGR+ D L + ++ VLDEAD ML GF+ QI I ++
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 204
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
+ QV++ SAT P +V ++ + F+ D +++ + T I Q + E E ++KL
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE-GIRQFY-INVERE-EWKLD 261
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF+ T+RK D +T + + + A+HG+ Q+ERD ++ EFR G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321
Query: 425 RASILVS 431
+ +L++
Sbjct: 322 SSRVLIT 328
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVSDFDIL 670
++ H + Q+ERD ++ EFR G + +L++ D+L
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLITT-DLL 332
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYN 616
++ H + Q+ERD ++ EFR G + +L++ D + + + S+++++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT--------TDLLARGIDVQQVSLVINYDL 349
Query: 617 KSQQER--DRVLNEFRIGRASILVSHYNKSQQERDRVLNE 654
+ +E R+ R GR + + N +E R L +
Sbjct: 350 PTNRENYIHRIGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
Score = 56 (24.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 437 QQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQQER--DR 494
Q+ERD ++ EFR G + +L++ D + + + S+++++ + +E R
Sbjct: 308 QKERDVIMREFRSGSSRVLITT--------DLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 495 VLNEFRIGRASILVSHYNKSQQERDRVLNE 524
+ R GR + + N +E R L +
Sbjct: 360 IGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 397 (144.8 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 99/307 (32%), Positives = 169/307 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F++ N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQV 245
+ + + L++ + LVLAPTRELAQQI+ V G A+ AC+ GG +V
Sbjct: 91 LQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGTNVRAEV 144
Query: 246 KALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ LQ A I++ TPGR+ D L + ++ VLDEAD ML GF+ QI I ++
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 204
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
+ QV++ SAT P +V ++ + F+ D +++ + T I Q + E E ++KL
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE-GIRQFY-INVERE-EWKLD 261
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF+ T+RK D +T + + + A+HG+ Q+ERD ++ EFR G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321
Query: 425 RASILVS 431
+ +L++
Sbjct: 322 SSRVLIT 328
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVSDFDIL 670
++ H + Q+ERD ++ EFR G + +L++ D+L
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLITT-DLL 332
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYN 616
++ H + Q+ERD ++ EFR G + +L++ D + + + S+++++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT--------TDLLARGIDVQQVSLVINYDL 349
Query: 617 KSQQER--DRVLNEFRIGRASILVSHYNKSQQERDRVLNE 654
+ +E R+ R GR + + N +E R L +
Sbjct: 350 PTNRENYIHRIGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
Score = 56 (24.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 437 QQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQQER--DR 494
Q+ERD ++ EFR G + +L++ D + + + S+++++ + +E R
Sbjct: 308 QKERDVIMREFRSGSSRVLITT--------DLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 495 VLNEFRIGRASILVSHYNKSQQERDRVLNE 524
+ R GR + + N +E R L +
Sbjct: 360 IGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 397 (144.8 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 99/307 (32%), Positives = 169/307 (55%)
Query: 127 IQHFEECNFPPYIMKKIYEMGFQAPTAIQAQGWPIALSGCDLVAIAKTGSGKTLGYIAPA 186
+ F++ N +++ IY GF+ P+AIQ + + G D++A A++G+GKT +
Sbjct: 31 VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90
Query: 187 IVHVNSQRPLRSGEGPIVLVLAPTRELAQQIETVANDFGSAT-ATRVACVFGGAPKGPQV 245
+ + + L++ + LVLAPTRELAQQI+ V G A+ AC+ GG +V
Sbjct: 91 LQQI--ELDLKATQA---LVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGTNVRAEV 144
Query: 246 KALQTGA-EIVIATPGRLIDYLEQGTINLHRTSYLVLDEADRMLDMGFEPQIRKIIGQIR 304
+ LQ A I++ TPGR+ D L + ++ VLDEAD ML GF+ QI I ++
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLN 204
Query: 305 PDRQVLMWSATWPKEVQKLAEDFLVDYVQLNIGSLNPTANHNIVQIVDVCQEHEKDYKLQ 364
+ QV++ SAT P +V ++ + F+ D +++ + T I Q + E E ++KL
Sbjct: 205 SNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLE-GIRQFY-INVERE-EWKLD 261
Query: 365 GLLSQIGSERTSKTIIFVETKRKADDITRSVRNKGWAAVAIHGNKSQQERDRVLNEFRIG 424
L + ++ +IF+ T+RK D +T + + + A+HG+ Q+ERD ++ EFR G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321
Query: 425 RASILVS 431
+ +L++
Sbjct: 322 SSRVLIT 328
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 635 SILVSHYNKSQQERDRVLNEFRIGRASILVSDFDIL 670
++ H + Q+ERD ++ EFR G + +L++ D+L
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLITT-DLL 332
Score = 62 (26.9 bits), Expect = 3.1e-40, Sum P(2) = 3.1e-40
Identities = 21/100 (21%), Positives = 46/100 (46%)
Query: 557 SILVSHYNKSQQERDRVLNEFRIGRASILVSHYNKSQQERDRVLNEFRIGRASILVSHYN 616
++ H + Q+ERD ++ EFR G + +L++ D + + + S+++++
Sbjct: 298 TVSAMHGDMDQKERDVIMREFRSGSSRVLIT--------TDLLARGIDVQQVSLVINYDL 349
Query: 617 KSQQER--DRVLNEFRIGRASILVSHYNKSQQERDRVLNE 654
+ +E R+ R GR + + N +E R L +
Sbjct: 350 PTNRENYIHRIGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
Score = 56 (24.8 bits), Expect = 1.3e-39, Sum P(2) = 1.3e-39
Identities = 20/90 (22%), Positives = 42/90 (46%)
Query: 437 QQERDRVLNEFRIGRASILVSQYKESQQKRDRVLNEFRIGRASILVSHYNKSQQER--DR 494
Q+ERD ++ EFR G + +L++ D + + + S+++++ + +E R
Sbjct: 308 QKERDVIMREFRSGSSRVLITT--------DLLARGIDVQQVSLVINYDLPTNRENYIHR 359
Query: 495 VLNEFRIGRASILVSHYNKSQQERDRVLNE 524
+ R GR + + N +E R L +
Sbjct: 360 IGRGGRFGRKGVAI---NMVTEEDKRTLRD 386
WARNING: HSPs involving 627 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 779 732 0.00087 121 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 877
No. of states in DFA: 627 (67 KB)
Total size of DFA: 362 KB (2177 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 60.99u 0.09s 61.08t Elapsed: 00:00:23
Total cpu time: 61.07u 0.09s 61.16t Elapsed: 00:00:26
Start: Thu Aug 15 11:43:18 2013 End: Thu Aug 15 11:43:44 2013
WARNINGS ISSUED: 2